Citrus Sinensis ID: 015890

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Secondary Structure (PSIPRED)
cccHHHHHHHHcccccHHHHHHHHHHHcccccEEccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHcccEEEEEcccccccccccHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEccccccccccccEEEEcccccccccccHHHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHEEEEccHHHHHHHHHHHHHccccEEEEccccEEccHHHHHHccccEEEEEccccccccccHHHHHHHHHcccccEEEEEEccccccccEccHHHHHHHHHHHHHccEEEEEcEEEEEEccccEEEcccccEEEEEcHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccHHHHHHHHHHHccEEEEEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEc
Coil and Loop (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQgvvywqppkmAMEKVKELvwdpsiskygadeglPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCdagdsvvmfAPYYFNSYMSFQMTGVTHilvgpcssktlhpdadwlektletkptpklvsvvnpgnpsgtyipERLLKRISDLCKAAGswlvvdntyfmydgrkhccvegdhVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSlqtgpewvTERVKDLVRNREIIREAlsplgegavkggEGAIYLWARlpekhlddfEVVRWLAHRHgvvvipggacgcrghlrisfgglvedDCKAAADRLRRGLEELVKDGMVQEHVLLID
Flexible Loop (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKtletkptpklvsvvnpgnpsgtYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRealsplgegavkGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEelvkdgmvqehvllid
Low Complexity Region (SEG)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered region (IsUnstruct)
*************TEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE*****KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLL**
Disordered Region (DISOPRED)
******************MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered Region (DISEMBL)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Disordered Region (DISPRO)
*****KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHVLLID
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	398	2.2.26 [Sep-21-2011]
Q9V0L2	389	Aspartate aminotransferas	yes	no	0.891	0.912	0.275	1e-31
O67781	394	Aspartate aminotransferas	yes	no	0.793	0.802	0.303	5e-31
Q9SIE1	475	Bifunctional aspartate am	no	no	0.886	0.743	0.258	1e-28
E9L7A5	479	Bifunctional aspartate am	N/A	no	0.896	0.745	0.268	2e-28
Q9X0Y2	377	Aspartate aminotransferas	yes	no	0.899	0.949	0.260	2e-28
Q56232	385	Aspartate aminotransferas	yes	no	0.876	0.906	0.272	4e-28
Q55128	389	Aspartate aminotransferas	N/A	no	0.809	0.827	0.256	2e-27
O33822	383	Aspartate aminotransferas	N/A	no	0.876	0.911	0.260	6e-27
Q60317	375	Probable aspartate aminot	yes	no	0.851	0.904	0.282	3e-26
P16524	393	Putative N-acetyl-LL-diam	yes	no	0.907	0.918	0.268	1e-25

>sp|Q9V0L2|AAT_PYRAB Aspartate aminotransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aspC PE=3 SV=1

 Score =  137 bits (346), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 185/377 (49%), Gaps = 22/377 (5%)

Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GLPELR+A+ +K
Sbjct: 17  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DMGLTHYGPNIGLPELREAIAEK 75

Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +       +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 76  LKKQNNIEADPNKEIMVLVGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K + T+ T  L+ + +P NP+G+ + ++ L+ I+D      
Sbjct: 136 VEVPTYEENEFRLNVDELKKYV-TEKTKALI-INSPCNPTGSVLKKKDLEEIADFAVEHD 193

Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
             ++ D  Y  F+YD  KH  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 194 LIVISDEVYEHFIYDDVKHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251

Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 308
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 252 -IEKMVKFQMYNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310

Query: 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 366
             VK  +GA Y++ R+ +  L   E    +     V V+PG A G    G++RIS+    
Sbjct: 311 PTVK-PKGAFYIFPRIKDTGLTSKEFSELMLMEAKVAVVPGSAFGKAGEGYVRISYATAY 369

Query: 367 EDDCKAAADRLRRGLEE 383
           E   + A DR+ + L E
Sbjct: 370 E-KLEEAMDRMEKVLRE 385

Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|O67781|AAT_AQUAE Aspartate aminotransferase OS=Aquifex aeolicus (strain VF5) GN=aspC PE=3 SV=1

 Score =  135 bits (340), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 23/339 (6%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+A+ +KL +ENK+ YK S ++V+AGA      I + + D GD V++ 
Sbjct: 63  TKYAPSAGIPELREAIAEKLLKENKVEYKPSEIVVSAGAKMVLFLIFMAILDEGDEVLLP 122

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSG 178
           +PY+       +  G   + V     K       D  EK  E     K + + +P NP+G
Sbjct: 123 SPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTERT---KAIVINSPNNPTG 179

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDN--TYFMYDGRKHCCVEG--DHVVNLF----SFSK 230
               E  LK+I++ C   G +++ D    YF+Y   K        D V N+     +FSK
Sbjct: 180 AVYEEEELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSK 239

Query: 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--GPEWVTER 288
           +Y M GWR+GY+A P E   +A  +  +        +  +Q+ AL +L+     ++V E 
Sbjct: 240 SYSMTGWRIGYVACPEE---YAKVIASLNSQSVSNVTTFAQYGALEALKNPKSKDFVNEM 296

Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVV 345
                R R+   E LS +    V   EGA Y++       EK   D ++  +L  +  V 
Sbjct: 297 RNAFERRRDTAVEELSKIPGMDVVKPEGAFYIFPDFSAYAEKLGGDVKLSEFLLEKAKVA 356

Query: 346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           V+PG A G  G LR+S+  L E+       R+++ LEE+
Sbjct: 357 VVPGSAFGAPGFLRLSY-ALSEERLVEGIRRIKKALEEI 394

Aquifex aeolicus (strain VF5) (taxid: 224324)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SIE1|PAT_ARATH Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Arabidopsis thaliana GN=PAT PE=1 SV=2

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 30/383 (7%)

Query: 25  LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84
           LV+     + LA G   +  PK+  E     + +   ++Y  + G+ ELR+A+ +KL +E
Sbjct: 94  LVQSGVPVIRLAAGEPDFDTPKVVAEAGINAIRE-GFTRYTLNAGITELREAICRKLKEE 152

Query: 85  NKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
           N L  +   ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +++  
Sbjct: 153 NGLSYAPDQILVSNGAKQSLLQAVLAVCSPGDEVIIPAPYWVSYTEQARLADATPVVIPT 212

Query: 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
             S     D   LE  L  K   +L+ + +P NP+G+  P+ LL+ I+ +       LV+
Sbjct: 213 KISNNFLLDPKDLESKLTEK--SRLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVL 270

Query: 203 DNTYF---MYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254
            +  +   +Y    H          +  + +  FSKA+ M GWR+GY+A P  +    + 
Sbjct: 271 SDEIYEHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAACS- 329

Query: 255 LLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311
             K+Q  +   AS I+Q   + +L   + G E V E VK     R+ + ++L  +    +
Sbjct: 330 --KLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387

Query: 312 KGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 361
              +GA YL+      +           D   +  +   +  V ++PG A G    +RIS
Sbjct: 388 SEPQGAFYLFIDFSAYYGSEAEGFGLINDSSSLALYFLDKFQVAMVPGDAFGDDSCIRIS 447

Query: 362 FGGLVEDDCKAAADRLRRGLEEL 384
           +   + D  +AA +++R+ LE L
Sbjct: 448 YATSL-DVLQAAVEKIRKALEPL 469

Prokaryotic-type aspartate aminotransferase. Has also a prenate transaminase activity. Involved in the aromatic amino acids biosynthesis pathway via the arogenate route. Required for the transamination of prephenate into arogenate. Required for early development of the embryo.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|E9L7A5|PAT_PETHY Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Petunia hybrida PE=1 SV=1

 Score =  127 bits (319), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 177/387 (45%), Gaps = 30/387 (7%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q   LV+     + LA G   +  P   +E     + +   ++Y  + G  ELR A+
Sbjct: 91  ITDQATALVQAGVPVIRLAAGEPDFDTPAPIVEAGINAIRE-GHTRYTPNAGTMELRSAI 149

Query: 78  VKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV 135
             KL +EN L  +   ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   
Sbjct: 150 SHKLKEENGLSYTPDQILVSNGAKQSIIQAVLAVCSPGDEVLIPAPYWVSYPEMARLADA 209

Query: 136 THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           T +++    S+    D   LE  L  K   +L+ + +P NP+G+  P +LL++I+++   
Sbjct: 210 TPVILPTSISEDFLLDPKLLESKLTEK--SRLLILCSPSNPTGSVYPRKLLEQIAEIVAR 267

Query: 196 AGSWLVVDN---TYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
               LV+ +    + +Y    H          D  + +  FSKA+ M GWR+GYIA P  
Sbjct: 268 HPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKH 327

Query: 248 VEGFATQLLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALS 304
              F     K+Q      AS ISQ  A+ +L     G E V   VK     R+ + ++  
Sbjct: 328 ---FIAACNKIQSQFTSGASSISQKAAVAALGLGYAGGELVATMVKSFRERRDYLVKSFG 384

Query: 305 PLGEGAVKGGEGAIYLWARLPEKH---LDDF-------EVVRWLAHRHGVVVIPGGACGC 354
            +    +    GA YL+  L   +   +D F        + R+L  +  V ++PG A G 
Sbjct: 385 EIEGVKISEPRGAFYLFIDLSSYYGVEVDGFGSINNSESLCRYLLDKAQVALVPGDAFGD 444

Query: 355 RGHLRISFGGLVEDDCKAAADRLRRGL 381
              +RIS+   +    +AA +R+++ L
Sbjct: 445 DTCIRISYAASL-STLQAAVERIKKAL 470

Prokaryotic-type aspartate aminotransferase. Has also a prenate transaminase activity. Involved in the aromatic amino acids biosynthesis pathway via the arogenate route. Required for the transamination of prephenate into arogenate. Can use 2-oxoglutarate, oxaloacetate and prephenate as substrates, but not phenylpyruvate or 4-hydroxyphenylpyruvate.

Petunia hybrida (taxid: 4102)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|Q9X0Y2|AAT_THEMA Aspartate aminotransferase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=aspC PE=1 SV=1

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 22/380 (5%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++++  +   M +  + + L++  ++ ++L  G   +  P+  +E+    +    + KY 
Sbjct: 5   RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 63

Query: 66  ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
              G+ ELR+ + K++ +  K  +    V+VT GA QA  N  + L D GD V++F+P +
Sbjct: 64  DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 123

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +      + G T  +V    SK   P  + +E  L  K   K V + +P NP+G     
Sbjct: 124 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 181

Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 237
             L+ +  L K    +++ D  Y   +Y       +   EG D +V +  FSK++ M GW
Sbjct: 182 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 241

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGY+    +V   AT + K+Q +   C + ++Q+ AL +L+    ++ +  K+    + 
Sbjct: 242 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 295

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
            + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A    G 
Sbjct: 296 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 351

Query: 358 LRISFGGLVEDDCKAAADRL 377
           +R+SF   +E     A DR+
Sbjct: 352 VRLSFATSIE-RLTEALDRI 370

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q56232|AAT_THET8 Aspartate aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=aspC PE=1 SV=1

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83

Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258

Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318

Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375

Query: 375 DRLRRGL 381
           +R  R L
Sbjct: 376 ERFARVL 382

Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (taxid: 300852)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q55128|AAT_SYNY3 Aspartate aminotransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=aspC PE=3 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 40/362 (11%)

Query: 41  YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGA 98
           +  PP +   +  +L  D   ++YG   G P LR A+ KKL ++N L Y+++ ++VT G 
Sbjct: 42  FTTPPHIV--EAAKLALDEGKTRYGPAAGEPALRQAIAKKLREKNNLPYEAANILVTNGG 99

Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158
             +  N++L + + GD V++ APY+ +     ++   T ++V   ++       + L + 
Sbjct: 100 KHSLFNLMLAMIEQGDEVIIPAPYWLSYPEMVRLAEGTPVIVNTTAATDYKITPEQLRQA 159

Query: 159 LETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC 215
           + +K   KL  + +P NP+G  Y P  +    + + +    ++V D  Y   +YDG +H 
Sbjct: 160 ITSKS--KLFVLNSPSNPTGAVYTPAEIRALAAVILEYEDLYVVSDEIYERILYDGTEHL 217

Query: 216 CVEG------DHVVNLFSFSKAYGMMGWRVGYIA--YP-----SEVEGFATQLLKVQDNI 262
            +           +    F+K+Y M GWRVGY+A   P     S ++G +T         
Sbjct: 218 SIGAVNDEIFQRTIISNGFAKSYSMTGWRVGYLAGELPLIQACSTIQGHSTS-------- 269

Query: 263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 322
            +C    +Q+ A+ +L+     V   VK     R++I E ++ +   +    +GA Y++ 
Sbjct: 270 NVCT--FAQYGAIAALENPQTCVETMVKAFTERRQVIVEGINQIAGLSCPNPKGAFYVFV 327

Query: 323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382
            + +  L+  E    L   H V VIPG A G    +R S+            D +++GL 
Sbjct: 328 DIAKTGLNSLEFSARLLESHQVAVIPGAAFGADDCVRFSYA--------TDMDTIKQGLA 379

Query: 383 EL 384
           EL
Sbjct: 380 EL 381

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|O33822|AAT_THEAQ Aspartate aminotransferase OS=Thermus aquaticus GN=aspC PE=3 SV=1

 Score =  122 bits (305), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 168/369 (45%), Gaps = 20/369 (5%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+A+ +K  +
Sbjct: 25  ELRRKGVDLVALTAGEPDFDTPEHVKEAGRRALAQ-GKTKYAPPAGIPELREAVAEKFRR 83

Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ APY+ +     +  G   + V 
Sbjct: 84  ENGLEVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLAPYWVSYPEMVRFAGGVPVEVP 143

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   PE +L+ ++++      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGVVYPEEVLRALAEMALQHDFYLV 201

Query: 202 VDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV----EGFAT 253
            D  Y   +Y+G       +  +H + +   +KA+ M GWR+GY   P  V       ++
Sbjct: 202 SDEIYEHLIYEGAHFSPGTLAPEHTITVNGAAKAFAMTGWRIGYACGPKAVIKAMADVSS 261

Query: 254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313
           Q     D I   A++     AL + +    ++    +   + R+++ E LS +G  AV+ 
Sbjct: 262 QSTTSPDTIAQWATL----EALTNREASMAFIAMAREAYRKRRDLLLEGLSRIGLEAVRP 317

Query: 314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAA 373
             GA Y+         ++ E    L    GV V+PG      GH+R+S+    E++ K A
Sbjct: 318 S-GAFYVLMDTSPFAPNEVEAAERLLM-AGVAVVPGTEFAAFGHVRLSY-ATGEENLKKA 374

Query: 374 ADRLRRGLE 382
            +R  + L+
Sbjct: 375 LERFAQALQ 383

Thermus aquaticus (taxid: 271)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q60317|AAT1_METJA Probable aspartate aminotransferase 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0001 PE=3 SV=1

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 179/365 (49%), Gaps = 26/365 (7%)

Query: 22  IQELVR-GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           I+E+      + ++L  G   +  PK  +E  K    D   + Y  + G+PELR+ +  K
Sbjct: 14  IREIFNLATSDCINLGIGEPDFDTPKHIIEAAKR-ALDEGKTHYSPNNGIPELREEISNK 72

Query: 81  LNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
           L  +  L   K +++VT GA++A +  ++TL D GD V++  P  F SY S     +T  
Sbjct: 73  LKDDYNLDVDKDNIIVTCGASEALMLSIMTLIDRGDEVLIPNPS-FVSYFS-----LTEF 126

Query: 139 LVGPCSSKTLHPDADW-LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
             G   +  L  + +  LEK  E  TK T KL+   +P NP+G    +  +K ++++ + 
Sbjct: 127 AEGKIKNIDLDENFNIDLEKVKESITKKT-KLIIFNSPSNPTGKVYDKETIKGLAEIAED 185

Query: 196 AGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE--- 249
               +V D  Y   +YD + +  ++  D  + +  FSK Y M GWR+GY+A   E+    
Sbjct: 186 YNLIIVSDEVYDKIIYDKKHYSPMQFTDRCILINGFSKTYAMTGWRIGYLAVSDELNKEL 245

Query: 250 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309
                ++K+      CA+  +Q+ AL +L+   + V + V++    R++I   L  + + 
Sbjct: 246 DLINNMIKIHQYSFACATTFAQYGALAALRGSQKCVEDMVREFKMRRDLIYNGLKDIFK- 304

Query: 310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVE 367
            V   +GA Y++  + E + D  EV + L   + V+ +PG A G  G  ++R S+    E
Sbjct: 305 -VNKPDGAFYIFPDVSE-YGDGVEVAKKLIE-NKVLCVPGVAFGENGANYIRFSYATKYE 361

Query: 368 DDCKA 372
           D  KA
Sbjct: 362 DIEKA 366

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|P16524|PATA_BACSU Putative N-acetyl-LL-diaminopimelate aminotransferase OS=Bacillus subtilis (strain 168) GN=patA PE=1 SV=3

 Score =  118 bits (295), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 172/388 (44%), Gaps = 27/388 (6%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA 66
           L  +A E E+  + +   LV   ++ +SL  G   +  P       K+ + D +++ Y  
Sbjct: 5   LNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAI-DENVTSYTP 63

Query: 67  DEGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           + G  ELR A+   +KK    N   +S +++T GA+QA      T+   GD V+M  P Y
Sbjct: 64  NAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIY 123

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
                   + G   ++V   +S      A  +E  L   P  K V +  P NP+G  + E
Sbjct: 124 PGYEPIINLCGAKPVIVD-TTSHGFKLTARLIEDAL--TPNTKCVVLPYPSNPTGVTLSE 180

Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWR 238
             LK I+ L K    +++ D  Y    YD R H  +     D  + +   SK++ M GWR
Sbjct: 181 EELKSIAALLKGRNVFVLSDEIYSELTYD-RPHYSIATYLRDQTIVINGLSKSHSMTGWR 239

Query: 239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298
           +G++  P ++   A  +LKV      CAS ISQ  AL ++  G +      +   +  + 
Sbjct: 240 IGFLFAPKDI---AKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDY 296

Query: 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RG 356
           + + L  +G   VK   GA Y++  +    +  F+    L    GV ++PG +      G
Sbjct: 297 VYDRLVSMGLDVVKPS-GAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEG 355

Query: 357 HLRISFGGLVEDDCKAAADRLRRGLEEL 384
           ++R+SF          + D LR GL+ L
Sbjct: 356 YVRLSFA--------CSMDTLREGLDRL 375

May catalyze the conversion of L-2-acetamido-6-oxopimelate to N-acetyl-LL-2,6-diaminopimelate.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
452090862	394	aspartate aminotransferase [Prunus persi	0.982	0.992	0.832	0.0
255552987	394	aspartate aminotransferase, putative [Ri	0.982	0.992	0.809	0.0
224058737	394	predicted protein [Populus trichocarpa]	0.982	0.992	0.835	0.0
449436086	398	PREDICTED: bifunctional aspartate aminot	0.982	0.982	0.784	0.0
388514633	399	unknown [Lotus japonicus]	0.989	0.987	0.780	0.0
356550576	395	PREDICTED: bifunctional aspartate aminot	0.977	0.984	0.796	0.0
225442741	394	PREDICTED: aspartate aminotransferase [V	0.982	0.992	0.779	0.0
363806962	395	uncharacterized protein LOC100803887 [Gl	0.977	0.984	0.786	0.0
355755203	393	PLP-dependent aminotransferase [Papaver	0.982	0.994	0.763	1e-177
115434860	394	Os01g0178000 [Oryza sativa Japonica Grou	0.982	0.992	0.728	1e-174

>gi|452090862|gb|AGF95102.1| aspartate aminotransferase [Prunus persica]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/394 (83%), Positives = 369/394 (93%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY KLAKRA+ETEMPIMVQIQ+LVRGAKNAVSLAQGVV+WQPPK A++KVKELVW+PS
Sbjct: 1   MGSYGKLAKRAVETEMPIMVQIQQLVRGAKNAVSLAQGVVHWQPPKQALDKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+ ELR+ALVKKL+ ENKLYKSSVMVT+GANQAFVN+VLTLCD+GDSVVMFA
Sbjct: 61  ISRYGADEGILELREALVKKLHNENKLYKSSVMVTSGANQAFVNLVLTLCDSGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP   +TL+PDADWLEKTL ETKPTPKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGHPETLYPDADWLEKTLSETKPTPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIP+ LLKRISD+C+ AGSWLVVDNTY  FMYD  KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPDPLLKRISDICRDAGSWLVVDNTYEYFMYDDLKHTCVEGNHIVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ+LAL+SL+ GPEWVTERVK LV+N+E
Sbjct: 241 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQYLALHSLEMGPEWVTERVKGLVKNKE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           I+ EALSPLG+ AVKGGEGAIYLWA+LP+K+ DD + V WLAHRHGVVVIPG ACGC G+
Sbjct: 301 IVLEALSPLGKDAVKGGEGAIYLWAKLPDKYADDDKFVHWLAHRHGVVVIPGSACGCPGN 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           +RISFGGL+EDDCKAAA+RLRRGLEEL++DGMVQ
Sbjct: 361 VRISFGGLLEDDCKAAAERLRRGLEELIRDGMVQ 394

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552987|ref|XP_002517536.1| aspartate aminotransferase, putative [Ricinus communis] gi|223543168|gb|EEF44700.1| aspartate aminotransferase, putative [Ricinus communis]

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/394 (80%), Positives = 363/394 (92%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY  LAKRALETEMP+MVQIQEL+RGAKNA+SLAQGVV+W PPK A+EKVKELVW+P 
Sbjct: 1   MGSYGMLAKRALETEMPVMVQIQELIRGAKNAISLAQGVVHWLPPKKALEKVKELVWEPR 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL+ KL +ENKL  SSVMVTAGANQAFVNIVL LCD GDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALMLKLRKENKLVNSSVMVTAGANQAFVNIVLALCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+ILVGP + KTLHPDADWLE+TL ET+P PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGITNILVGPGNPKTLHPDADWLERTLSETRPIPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIPE LLKRISDLC+ AGSWL+VDNTY  FMYDG KH C+EGDH+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRISDLCRKAGSWLIVDNTYEYFMYDGLKHSCIEGDHIVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPS VEGFATQLLK+QDNIPICASI+SQHLALYSL+ GPEWVT RVKDLV+NRE
Sbjct: 241 RVGYIAYPSGVEGFATQLLKIQDNIPICASILSQHLALYSLEVGPEWVTARVKDLVKNRE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           I+ EALSPLGE AV+GGEGAIYLWA+LP+K++DDF+VVRWLA RHGVVVIPGGA GC GH
Sbjct: 301 ILLEALSPLGEDAVRGGEGAIYLWAKLPDKYVDDFKVVRWLATRHGVVVIPGGASGCPGH 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           +RISFGGL+E DC++AA+RL++GLEELV +GMV+
Sbjct: 361 VRISFGGLIEPDCRSAAERLKKGLEELVSNGMVE 394

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058737|ref|XP_002299622.1| predicted protein [Populus trichocarpa] gi|118486870|gb|ABK95269.1| unknown [Populus trichocarpa] gi|222846880|gb|EEE84427.1| predicted protein [Populus trichocarpa]

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/394 (83%), Positives = 367/394 (93%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY KLAKRA+ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPK A+ KVKELVW+PS
Sbjct: 1   MGSYVKLAKRAVETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKQALNKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL +KL +ENKL KSSVMVTAGANQAFVN+VL LCDAGDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALTQKLQKENKLVKSSVMVTAGANQAFVNLVLALCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP + +TLHPDADWLE+TL E KP PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGNPETLHPDADWLERTLSEAKPVPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIP+ LLKRISDLC+ AGSWL+VDNTY  FMYDG KH C+EGDHVVN+FSFSKAYGMMGW
Sbjct: 181 YIPDPLLKRISDLCREAGSWLIVDNTYEYFMYDGLKHSCIEGDHVVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPS VEGF TQLLK+QDNIPICASI+SQHLALYSL+ GPEWVTE+VKDLV+NR+
Sbjct: 241 RVGYIAYPSGVEGFQTQLLKIQDNIPICASILSQHLALYSLEMGPEWVTEQVKDLVKNRD 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           II EALSPLGEGAVKGGEGAIYLWA+LPE+++DD +VVRWLA RHGV+VIPGGACGC GH
Sbjct: 301 IILEALSPLGEGAVKGGEGAIYLWAKLPEQYVDDDKVVRWLATRHGVIVIPGGACGCPGH 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           LRISFGGL E+DCKAAA+RLRRGLE+LV +G+VQ
Sbjct: 361 LRISFGGLTENDCKAAAERLRRGLEDLVSNGIVQ 394

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436086|ref|XP_004135825.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cucumis sativus] gi|449520563|ref|XP_004167303.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cucumis sativus]

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/394 (78%), Positives = 358/394 (90%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSY +LA+RALETEMPIMV+IQE+VRG+KN +SLAQGVVYWQPP+ A++K  ELVW+PS
Sbjct: 1   MGSYGRLARRALETEMPIMVKIQEIVRGSKNVLSLAQGVVYWQPPQQALKKAAELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YGADEG+PELR+AL +KLN+ENKLYKSSVMVTAGANQAFVN+VLTLCDAGDSVVMFA
Sbjct: 61  ISRYGADEGIPELREALTRKLNEENKLYKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP   KTLHPD DWLEKTL E KPTPKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGDPKTLHPDPDWLEKTLSEVKPTPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIP+ LLKR++++C+ AGSWLVVDNTY  FM+DG KHCCVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPQPLLKRLANICEQAGSWLVVDNTYEYFMFDGLKHCCVEGNHIVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           R+GYIAYP+EV+GF  QLLKVQDNIPICA+I+SQHLAL SL+ GPEWVTE+VKDLV+ R+
Sbjct: 241 RIGYIAYPTEVKGFGDQLLKVQDNIPICAAILSQHLALNSLKLGPEWVTEQVKDLVKCRD 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           II +ALSPLG  AVKGGEGAIYLWA+LP++  DD +VV WLA RHG+VVIPG ACG  G+
Sbjct: 301 IILQALSPLGLDAVKGGEGAIYLWAKLPDEFADDHQVVLWLARRHGIVVIPGSACGSPGN 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           +RISFGGLVEDDC+AAA+RLR+GLEEL   GMVQ
Sbjct: 361 IRISFGGLVEDDCRAAAERLRKGLEELCSAGMVQ 394

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514633|gb|AFK45378.1| unknown [Lotus japonicus]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/397 (78%), Positives = 357/397 (89%), Gaps = 3/397 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGSYA LA+RALETEMPIMVQ+QE++RGAKN VSLAQGVVYWQPPK A+ KVKELVW+PS
Sbjct: 1   MGSYANLARRALETEMPIMVQMQEVLRGAKNCVSLAQGVVYWQPPKPALGKVKELVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +S+YGADEGLPELR ALVKKL QEN L+KSSVMVTAGANQAFVN+VLTLCDAGDSVVMFA
Sbjct: 61  VSRYGADEGLPELRVALVKKLRQENNLHKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+I VGP S  TL+PD DWLE+ L E+KP PKLV+VVNPGNP+GT
Sbjct: 121 PYYFNAYMSFQMTGITNIHVGPGSPDTLYPDVDWLERILTESKPVPKLVTVVNPGNPTGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIPE LL+RI++LCK AGSWL+VDNTY  FM+DG KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPESLLQRIANLCKNAGSWLLVDNTYEYFMFDGLKHSCVEGNHIVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPSEVEG + QLLKVQDNIPICASIISQHLAL+SL+ GPEWV ERV+ L +NRE
Sbjct: 241 RVGYIAYPSEVEGLSAQLLKVQDNIPICASIISQHLALHSLEMGPEWVRERVQTLAKNRE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           I+ EALSPLGEG+VKGGEGAIYL+A+ P+   DDF+VVRWLA+RHG+ VIPG ACG  G+
Sbjct: 301 IVSEALSPLGEGSVKGGEGAIYLFAKPPKGGYDDFDVVRWLANRHGIAVIPGSACGAAGN 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEHV 394
           LRISFGGL E DC+AAA+RL++GLEELV +G+VQ+ V
Sbjct: 361 LRISFGGLTESDCRAAAERLKKGLEELVANGLVQDPV 397

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550576|ref|XP_003543661.1| PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Glycine max]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/393 (79%), Positives = 357/393 (90%), Gaps = 4/393 (1%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS+ KL++RALETEMP+MVQ+QEL+RGAKNAVSLAQGVVYWQPPK A+EKVKELV +P 
Sbjct: 1   MGSFVKLSRRALETEMPVMVQMQELLRGAKNAVSLAQGVVYWQPPKQALEKVKELVSEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YG DEG+PELR ALVKKL  EN L+KSSVMVT+GANQAFVN+VLTLCD GDSVVMFA
Sbjct: 61  ISRYGNDEGIPELRAALVKKLRDENNLHKSSVMVTSGANQAFVNLVLTLCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP SS TLHPDADWLE+ L ETKP PKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPGSSDTLHPDADWLERILSETKPPPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNT--YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIPE LLKRISDLCK AGSWLVVDNT  YFMYDG KH CVEG+H+VN+FSFSKA+GMMGW
Sbjct: 181 YIPEPLLKRISDLCKNAGSWLVVDNTYEYFMYDGLKHSCVEGNHIVNVFSFSKAFGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPSEV+ FA QLLKVQDNIPICASI+SQ+LALYSL+ GP+WV ++VK L +NRE
Sbjct: 241 RVGYIAYPSEVKDFAEQLLKVQDNIPICASILSQYLALYSLEVGPQWVVDQVKTLEKNRE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIPGGACGCRG 356
           I+ EALSPLGEG+VKGGEGAIYLWA+LP  +  DDF+VVRWLA++HGV VIPG ACGC G
Sbjct: 301 IVLEALSPLGEGSVKGGEGAIYLWAKLPHGNAHDDFDVVRWLANKHGVAVIPGKACGCPG 360

Query: 357 HLRISFGGLVEDDCKAAADRLRRGLEELVKDGM 389
           +LRISFGGL E+DC+AAA+RL++GLEELV+DG+
Sbjct: 361 NLRISFGGLTENDCRAAAERLKKGLEELVRDGL 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442741|ref|XP_002284955.1| PREDICTED: aspartate aminotransferase [Vitis vinifera] gi|297743332|emb|CBI36199.3| unnamed protein product [Vitis vinifera]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/394 (77%), Positives = 351/394 (89%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           M SY  LA+R +ETE P+MVQIQEL+RGA +A+SLAQGVVYWQPPK A+EKVK+LVW+PS
Sbjct: 1   MSSYGMLARRVVETETPVMVQIQELIRGAGDAMSLAQGVVYWQPPKQALEKVKDLVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +S+YGAD+GLPELR+ALV+KL QENKLYKSSVMVTAGANQAFVN+VLTLCDAGD VVMFA
Sbjct: 61  VSRYGADDGLPELREALVEKLRQENKLYKSSVMVTAGANQAFVNLVLTLCDAGDLVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTGVT+ILVGP + KTLHPDADWLEK L ETKP PK+V+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGVTNILVGPSNPKTLHPDADWLEKILLETKPAPKVVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIPE LLKR +DLC+ AGSWLVVDNTY  FMYDG KH CVEGDH+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRFADLCRNAGSWLVVDNTYEYFMYDGLKHTCVEGDHIVNIFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPS VEG   QLLKVQDNIPICASI SQHLALYSL+ GPEWVT++VK LV NR 
Sbjct: 241 RVGYIAYPSNVEGLGAQLLKVQDNIPICASIFSQHLALYSLEMGPEWVTKQVKSLVINRS 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           +I +ALSPLG+ +VKGGEGAIYL+A+LP+K+ DDFEVVRWLA +H VVVIPG ACG  G 
Sbjct: 301 LIMDALSPLGKDSVKGGEGAIYLFAKLPDKYHDDFEVVRWLARKHRVVVIPGSACGTPGS 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           LR+SFGGL ED+ + AA RL++G+EELV+DGM+Q
Sbjct: 361 LRVSFGGLREDETQIAAGRLKKGIEELVRDGMLQ 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806962|ref|NP_001242056.1| uncharacterized protein LOC100803887 [Glycine max] gi|255635568|gb|ACU18134.1| unknown [Glycine max]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/393 (78%), Positives = 352/393 (89%), Gaps = 4/393 (1%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS  KL++RALETEMP+MVQ+QEL RGAKNA+SLAQGVVYWQPPK A+EKVKELV +P 
Sbjct: 1   MGSSVKLSRRALETEMPVMVQMQELQRGAKNALSLAQGVVYWQPPKQALEKVKELVSEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           IS+YG DEG+PELR ALVKKL  EN L+KSSVMVT+GANQ FVN+VLTLCD GDSVVMFA
Sbjct: 61  ISRYGNDEGIPELRAALVKKLRDENNLHKSSVMVTSGANQVFVNLVLTLCDPGDSVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFN+YMSFQMTG+T+ILVGP SS TLHPDADWLE+ L E KP PKLV+VVNPGNPSGT
Sbjct: 121 PYYFNAYMSFQMTGITNILVGPGSSDTLHPDADWLERILSENKPAPKLVTVVNPGNPSGT 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNT--YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           YIPE LLKRISDLCK AGSWLVVDNT  YFMYDG KH CVEG+H+VN+FSFSKAYGMMGW
Sbjct: 181 YIPEPLLKRISDLCKNAGSWLVVDNTYEYFMYDGLKHSCVEGNHIVNVFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIAYPSEV+ FA QLLKVQDNIPICASI+SQ+LALYSL+ GP+WV ++VK L +NRE
Sbjct: 241 RVGYIAYPSEVKDFAEQLLKVQDNIPICASILSQYLALYSLEVGPQWVLDQVKTLEKNRE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIPGGACGCRG 356
           I+ EALSPLGEG+VKGGEGAIYLWA+LP+    DDF+VVRWLA++HGV VIPG ACGC  
Sbjct: 301 IVLEALSPLGEGSVKGGEGAIYLWAKLPDLDAHDDFDVVRWLANKHGVAVIPGKACGCPS 360

Query: 357 HLRISFGGLVEDDCKAAADRLRRGLEELVKDGM 389
           +LRISFGGL E+DC+AAA+RL++GLEELV+DG+
Sbjct: 361 NLRISFGGLTENDCRAAAERLKKGLEELVRDGL 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|355755203|gb|AET06149.1| PLP-dependent aminotransferase [Papaver somniferum]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/393 (76%), Positives = 340/393 (86%), Gaps = 2/393 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MG+Y KLAKR LETE P+MVQIQE+ R  K+AVSLAQGVVYWQPP+ A+EKVK++V +P 
Sbjct: 1   MGTYMKLAKRVLETESPVMVQIQEIFRSCKDAVSLAQGVVYWQPPEEALEKVKKIVDEPL 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
            S+YG DEGLP LR+AL KKL +ENKLYKSSVMVTAGANQAFVN+VL LCDA D VVMFA
Sbjct: 61  TSRYGGDEGLPALREALTKKLQEENKLYKSSVMVTAGANQAFVNLVLALCDAEDRVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           PYYFNSYMSFQMTG+T ILVGP   KTL PDADWLEK L T+P PKLV++VNPGNPSGTY
Sbjct: 121 PYYFNSYMSFQMTGITDILVGPGDPKTLQPDADWLEKVLSTEPVPKLVNIVNPGNPSGTY 180

Query: 181 IPERLLKRISDLCKAAGSWLVVDNT--YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 238
           IPE LLKRISDLCK AGSWLVVDNT  YFMYDG KH C+EGDH++N+FSFSKAYGMMGWR
Sbjct: 181 IPEPLLKRISDLCKKAGSWLVVDNTYEYFMYDGLKHTCIEGDHILNVFSFSKAYGMMGWR 240

Query: 239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298
           VGYIAYP+E +G A QLLKVQDNIPICA I+SQ LAL+SL+TG +WV  +VKDLV+NREI
Sbjct: 241 VGYIAYPTETKGLAEQLLKVQDNIPICAPIVSQRLALFSLETGSDWVRNQVKDLVKNREI 300

Query: 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 358
           + +ALSPLG GAVKGGEGAIYLWA+LP+KH DDFEVVRWLA RHGVV+IPG A G  G +
Sbjct: 301 LLDALSPLGVGAVKGGEGAIYLWAKLPDKHQDDFEVVRWLAKRHGVVLIPGSASGGPGCV 360

Query: 359 RISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           R+SFGGL + DC+ AA RL++GLEELVK GMVQ
Sbjct: 361 RVSFGGLKDGDCEFAALRLKKGLEELVKHGMVQ 393

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115434860|ref|NP_001042188.1| Os01g0178000 [Oryza sativa Japonica Group] gi|15289767|dbj|BAB63467.1| putative aspartate aminotransferase [Oryza sativa Japonica Group] gi|113531719|dbj|BAF04102.1| Os01g0178000 [Oryza sativa Japonica Group] gi|125524650|gb|EAY72764.1| hypothetical protein OsI_00629 [Oryza sativa Indica Group] gi|125569247|gb|EAZ10762.1| hypothetical protein OsJ_00598 [Oryza sativa Japonica Group]

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 287/394 (72%), Positives = 347/394 (88%), Gaps = 3/394 (0%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           MGS+ +LA+RA+ETE P+MV++QEL+RG K+ +SLAQGVVYWQPP+ AM K+KE+VW+PS
Sbjct: 1   MGSFGRLARRAVETEAPVMVKMQELLRGNKDVMSLAQGVVYWQPPEAAMNKIKEIVWEPS 60

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           ISKYG+D+GLPELR+AL++KL +ENKL KSS+MVT+GANQAFVN+VLTLCDAGD+VVMFA
Sbjct: 61  ISKYGSDDGLPELREALLEKLRRENKLTKSSIMVTSGANQAFVNVVLTLCDAGDAVVMFA 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
           PYYFNSYMSFQMTGVT ILVG  + +TLHPD DWLEK L E  P PKLVSVVNPGNPSG 
Sbjct: 121 PYYFNSYMSFQMTGVTDILVGASNPETLHPDVDWLEKVLQENNPIPKLVSVVNPGNPSGA 180

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
           +IP+ +L+RIS+LC+ AG+WLVVDNTY  FMYDG +H C+EG+H+VNLFSFSKAYGMMGW
Sbjct: 181 FIPKPMLERISELCRNAGAWLVVDNTYEYFMYDGMEHYCLEGNHIVNLFSFSKAYGMMGW 240

Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGYIA+P+E +G   QLLKVQDNIPICASII Q LALY+L+ GPEW+ ERV+DLV+NRE
Sbjct: 241 RVGYIAHPNEADGLHAQLLKVQDNIPICASIIGQRLALYALEAGPEWIRERVRDLVKNRE 300

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
           ++ EA+SPLG+ +VKGGEGAIYLWA+LPEK  DDFEVVRWLA++HGV VIPG A G  G+
Sbjct: 301 LLMEAMSPLGKDSVKGGEGAIYLWAKLPEKCSDDFEVVRWLANKHGVAVIPGSASGGPGY 360

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
           +R+SFGGL E D + AA+RLRRGL+ELV +GMVQ
Sbjct: 361 IRVSFGGLKESDTRLAAERLRRGLQELVTEGMVQ 394

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
TAIR|locus:2034240	394	VAS1 "reversal of sav3 phenoty	0.982	0.992	0.718	9.9e-158
TIGR_CMR|GSU_0084	391	GSU_0084 "aminotransferase, cl	0.856	0.872	0.296	7.8e-39
UNIPROTKB|Q5LRI4	391	SPO2144 "Aminotransferase, cla	0.851	0.867	0.297	1.4e-30
TIGR_CMR|SPO_2144	391	SPO_2144 "aminotransferase, cl	0.851	0.867	0.297	1.4e-30
TAIR|locus:2060435	475	AAT "AT2G22250" [Arabidopsis t	0.886	0.743	0.266	1.1e-28
UNIPROTKB|E9L7A5	479	E9L7A5 "Bifunctional aspartate	0.886	0.736	0.283	1.2e-28
TIGR_CMR|CBU_0517	423	CBU_0517 "aspartate aminotrans	0.904	0.851	0.258	1.2e-26
UNIPROTKB|P96847	388	aspB "Possible aspartate amino	0.758	0.778	0.306	4.6e-25
TIGR_CMR|NSE_0758	397	NSE_0758 "aspartate aminotrans	0.861	0.863	0.270	2.1e-23
TIGR_CMR|ECH_0732	398	ECH_0732 "aspartate aminotrans	0.886	0.886	0.258	2.2e-23

TAIR|locus:2034240 VAS1 "reversal of sav3 phenotype 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
 Identities = 283/394 (71%), Positives = 338/394 (85%)

Query:     1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
             MGS+  L++R L T+MP+M QI+ L+    N +SLAQGVV+WQPP+ A+EKVKELVWDP 
Sbjct:     1 MGSFGMLSRRTLGTDMPVMAQIRSLMAELTNPMSLAQGVVHWQPPQKALEKVKELVWDPI 60

Query:    61 ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
             IS YG DEGLPELR AL+KKL +ENKL  S VMVTAGANQAFVN+V+TLCDAGDSVVMF 
Sbjct:    61 ISSYGPDEGLPELRQALLKKLREENKLTNSQVMVTAGANQAFVNLVITLCDAGDSVVMFE 120

Query:   121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179
             PYYFNSYM+FQMTGVT+I+VGP  S TL+PDADWLE+TL E+KPTPK+V+VVNPGNPSGT
Sbjct:   121 PYYFNSYMAFQMTGVTNIIVGPGQSDTLYPDADWLERTLSESKPTPKVVTVVNPGNPSGT 180

Query:   180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 237
             Y+PE LLKRI+ +CK AG WL+VDNTY  FMYDG KHCCVEGDH+VN+FSFSK YGMMGW
Sbjct:   181 YVPEPLLKRIAQICKDAGCWLIVDNTYEYFMYDGLKHCCVEGDHIVNVFSFSKTYGMMGW 240

Query:   238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
             R+GYIAY   ++GFAT+L+K+QDNIPICA+IISQ LA+Y+L+ G  W+TERVK LV+NR+
Sbjct:   241 RLGYIAYSERLDGFATELVKIQDNIPICAAIISQRLAVYALEEGSGWITERVKSLVKNRD 300

Query:   298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
             I++EAL PLG+  VKGGEGAIYLWA+LPE H DDF+VVRWLAHRHGVVVIPG A G  G+
Sbjct:   301 IVKEALEPLGKENVKGGEGAIYLWAKLPEGHRDDFKVVRWLAHRHGVVVIPGCASGSPGY 360

Query:   358 LRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQ 391
             LR+SFGGL E + +AAA RLR+G+EEL+  GMV+
Sbjct:   361 LRVSFGGLQEVEMRAAAARLRKGIEELLHHGMVE 394

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008483 "transaminase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009641 "shade avoidance" evidence=IMP

GO:0009851 "auxin biosynthetic process" evidence=IMP

GO:0010326 "methionine-oxo-acid transaminase activity" evidence=IDA

GO:0010366 "negative regulation of ethylene biosynthetic process" evidence=IMP

GO:1901997 "negative regulation of indoleacetic acid biosynthetic process via tryptophan" evidence=IDA

TIGR_CMR|GSU_0084 GSU_0084 "aminotransferase, classes I and II" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 106/357 (29%), Positives = 174/357 (48%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKS 90
             V L Q V  + P +   + +  L+ DP +SKY  DEGLPE+R+ +  +  +     +   
Sbjct:    36 VDLCQAVPDYPPARQLTDYLAALLDDPLVSKYSPDEGLPEVREGVCARYGRVYGAAMNPD 95

Query:    91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150
              + +T GA+QAF   ++TLC AGD V++  P YF+  M+  + GV  + +     +   P
Sbjct:    96 QLCLTIGASQAFWLAMVTLCRAGDEVIVPLPAYFDHPMALDILGVRPVYLPFDEERGGVP 155

Query:   151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208
             D   +E+ +   P  + + +V P NP+G   P   ++ +  + +  G  LV+D TY  F+
Sbjct:   156 DPAAVERLIT--PRTRAILLVTPSNPTGVVTPPETIQELHGVARRRGIALVLDETYADFI 213

Query:   209 YDG-RKH-CCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263
               G R H   ++   GDH+++L SF K Y + G+R G +A   E  G A   LK QD + 
Sbjct:   214 PGGERPHDLFLDPRWGDHLIHLMSFGKTYALTGYRAGCLAASKEFIGHA---LKAQDTMA 270

Query:   264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
             +C   I+Q+  LY +     WV E    + R  ++ R   +  G        G  + W R
Sbjct:   271 VCQPRITQYAVLYGVSHLDGWVEENRLMMTRRHDLFRSLFTRPGNPFSLVASGTFFAWVR 330

Query:   324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 378
              P +     E  R LA   G++ +PG   G     +LR++FG + ++    A +R R
Sbjct:   331 HPLQEGTGREAARRLAVEAGIICLPGEVFGPGLEPYLRLAFGNIRDEAIPGAVERFR 387

GO:0008152 "metabolic process" evidence=ISS

GO:0008483 "transaminase activity" evidence=ISS

UNIPROTKB|Q5LRI4 SPO2144 "Aminotransferase, classes I and II" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 109/367 (29%), Positives = 170/367 (46%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKEL-VWDPSISKYGADEGLPELRDALVKKLNQE--NKLYK 89
             ++++Q      PP+   + + +  + + S   YG   G  +LR  L  +++      +  
Sbjct:    33 INVSQAAPVEPPPQALRQAMADFALTEDSAHLYGPVLGNADLRAELAAQISHHYGGAVRP 92

Query:    90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
               V +T+G NQAF   +  +   GD V++  P+YFN  M   M GVT + +   +   L 
Sbjct:    93 EQVAITSGCNQAFAATISAITGEGDEVILPTPWYFNHKMWLDMEGVTAVPLA--TGPDLL 150

Query:   150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY 209
             PD +   + L T P  + +++V P NP G   P  L+    DL    G  L++D TY  +
Sbjct:   151 PDVE-AARALIT-PRTRAIALVTPNNPGGVEYPAELVGAFYDLAAEHGLRLLLDETYRDF 208

Query:   210 DGRK---HCCV---EGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262
             D R    H      + D  +V+L+SFSKAY + G RVG +A  S+  G   ++ K  D +
Sbjct:   209 DSRSGAPHDLFTRPDWDKTLVHLYSFSKAYRLTGHRVGALA--SDT-GLLAEIEKFLDTV 265

Query:   263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW 321
              IC   I QH AL+ ++   +WV     +++  R  I E +  L  EG    G GA + +
Sbjct:   266 AICPGQIGQHAALWGMRNLGQWVAGERDEILDRRAAIAEGMPALVAEGWTLLGLGAYFAY 325

Query:   322 ARLPEKHLDDFEVVRWLAHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAA 374
                P     D E+ R L    GV+V+PG          G R  LR++F  L         
Sbjct:   326 LEHPFDLPSD-ELARRLVRDAGVLVLPGTMFMPEGDLAGAR-QLRVAFANLDRAGIGQLF 383

Query:   375 DRLRRGL 381
             DRL+ GL
Sbjct:   384 DRLK-GL 389

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_2144 SPO_2144 "aminotransferase, classes I and II" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 109/367 (29%), Positives = 170/367 (46%)

Query:    33 VSLAQGVVYWQPPKMAMEKVKEL-VWDPSISKYGADEGLPELRDALVKKLNQE--NKLYK 89
             ++++Q      PP+   + + +  + + S   YG   G  +LR  L  +++      +  
Sbjct:    33 INVSQAAPVEPPPQALRQAMADFALTEDSAHLYGPVLGNADLRAELAAQISHHYGGAVRP 92

Query:    90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
               V +T+G NQAF   +  +   GD V++  P+YFN  M   M GVT + +   +   L 
Sbjct:    93 EQVAITSGCNQAFAATISAITGEGDEVILPTPWYFNHKMWLDMEGVTAVPLA--TGPDLL 150

Query:   150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY 209
             PD +   + L T P  + +++V P NP G   P  L+    DL    G  L++D TY  +
Sbjct:   151 PDVE-AARALIT-PRTRAIALVTPNNPGGVEYPAELVGAFYDLAAEHGLRLLLDETYRDF 208

Query:   210 DGRK---HCCV---EGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 262
             D R    H      + D  +V+L+SFSKAY + G RVG +A  S+  G   ++ K  D +
Sbjct:   209 DSRSGAPHDLFTRPDWDKTLVHLYSFSKAYRLTGHRVGALA--SDT-GLLAEIEKFLDTV 265

Query:   263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW 321
              IC   I QH AL+ ++   +WV     +++  R  I E +  L  EG    G GA + +
Sbjct:   266 AICPGQIGQHAALWGMRNLGQWVAGERDEILDRRAAIAEGMPALVAEGWTLLGLGAYFAY 325

Query:   322 ARLPEKHLDDFEVVRWLAHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAA 374
                P     D E+ R L    GV+V+PG          G R  LR++F  L         
Sbjct:   326 LEHPFDLPSD-ELARRLVRDAGVLVLPGTMFMPEGDLAGAR-QLRVAFANLDRAGIGQLF 383

Query:   375 DRLRRGL 381
             DRL+ GL
Sbjct:   384 DRLK-GL 389

GO:0008150 "biological_process" evidence=ND

GO:0008483 "transaminase activity" evidence=ISS

TAIR|locus:2060435 AAT "AT2G22250" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 1.1e-28, P = 1.1e-28
 Identities = 102/383 (26%), Positives = 181/383 (47%)

Query:    25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84
             LV+     + LA G   +  PK+  E     + +   ++Y  + G+ ELR+A+ +KL +E
Sbjct:    94 LVQSGVPVIRLAAGEPDFDTPKVVAEAGINAIRE-GFTRYTLNAGITELREAICRKLKEE 152

Query:    85 NKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
             N L Y    ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +++  
Sbjct:   153 NGLSYAPDQILVSNGAKQSLLQAVLAVCSPGDEVIIPAPYWVSYTEQARLADATPVVIPT 212

Query:   143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
               S     D   LE  L  K   +L+ + +P NP+G+  P+ LL+ I+ +       LV+
Sbjct:   213 KISNNFLLDPKDLESKLTEKS--RLLILCSPSNPTGSVYPKSLLEEIARIIAKHPRLLVL 270

Query:   203 -DNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254
              D  Y   +Y    H          +  + +  FSKA+ M GWR+GY+A P  +    + 
Sbjct:   271 SDEIYEHIIYAPATHTSFASLPDMYERTLTVNGFSKAFAMTGWRLGYLAGPKHIVAACS- 329

Query:   255 LLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311
               K+Q  +   AS I+Q   + +L   + G E V E VK     R+ + ++L  +    +
Sbjct:   330 --KLQGQVSSGASSIAQKAGVAALGLGKAGGETVAEMVKAYRERRDFLVKSLGDIKGVKI 387

Query:   312 KGGEGAIYLWARLPEKH---LDDFEVVR-------WLAHRHGVVVIPGGACGCRGHLRIS 361
                +GA YL+      +    + F ++        +   +  V ++PG A G    +RIS
Sbjct:   388 SEPQGAFYLFIDFSAYYGSEAEGFGLINDSSSLALYFLDKFQVAMVPGDAFGDDSCIRIS 447

Query:   362 FGGLVEDDCKAAADRLRRGLEEL 384
             +   + D  +AA +++R+ LE L
Sbjct:   448 YATSL-DVLQAAVEKIRKALEPL 469

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009095 "aromatic amino acid family biosynthetic process, prephenate pathway" evidence=IDA

GO:0033853 "aspartate-prephenate aminotransferase activity" evidence=IDA

GO:0033854 "glutamate-prephenate aminotransferase activity" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

UNIPROTKB|E9L7A5 E9L7A5 "Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase" [Petunia x hybrida (taxid:4102)]

 Score = 320 (117.7 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 109/385 (28%), Positives = 180/385 (46%)

Query:    21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
             Q   LV+     + LA G   +  P   +E     + +   ++Y  + G  ELR A+  K
Sbjct:    94 QATALVQAGVPVIRLAAGEPDFDTPAPIVEAGINAIREGH-TRYTPNAGTMELRSAISHK 152

Query:    81 LNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
             L +EN L Y    ++V+ GA Q+ +  VL +C  GD V++ APY+ +     ++   T +
Sbjct:   153 LKEENGLSYTPDQILVSNGAKQSIIQAVLAVCSPGDEVLIPAPYWVSYPEMARLADATPV 212

Query:   139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
             ++    S+    D   LE  L  K   +L+ + +P NP+G+  P +LL++I+++      
Sbjct:   213 ILPTSISEDFLLDPKLLESKLTEKS--RLLILCSPSNPTGSVYPRKLLEQIAEIVARHPR 270

Query:   199 WLVV-DNTY--FMYDGRKH---CCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
              LV+ D  Y   +Y    H     + G  D  + +  FSKA+ M GWR+GYIA P     
Sbjct:   271 LLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKH--- 327

Query:   251 FATQLLKVQDNIPICASIISQHLALYSL---QTGPEWVTERVKDLVRNREIIREALSPLG 307
             F     K+Q      AS ISQ  A+ +L     G E V   VK     R+ + ++   + 
Sbjct:   328 FIAACNKIQSQFTSGASSISQKAAVAALGLGYAGGELVATMVKSFRERRDYLVKSFGEI- 386

Query:   308 EGA-VKGGEGAIYLWARLPEKH---LDDF-------EVVRWLAHRHGVVVIPGGACGCRG 356
             EG  +    GA YL+  L   +   +D F        + R+L  +  V ++PG A G   
Sbjct:   387 EGVKISEPRGAFYLFIDLSSYYGVEVDGFGSINNSESLCRYLLDKAQVALVPGDAFGDDT 446

Query:   357 HLRISFGGLVEDDCKAAADRLRRGL 381
              +RIS+   +    +AA +R+++ L
Sbjct:   447 CIRISYAASLST-LQAAVERIKKAL 470

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0009095 "aromatic amino acid family biosynthetic process, prephenate pathway" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0033853 "aspartate-prephenate aminotransferase activity" evidence=IDA

GO:0033854 "glutamate-prephenate aminotransferase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

TIGR_CMR|CBU_0517 CBU_0517 "aspartate aminotransferase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 104/402 (25%), Positives = 188/402 (46%)

Query:     7 LAKRALETEMPIMVQIQELVRGAKN----AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
             L+ RA + E  + + + +L R   N     +SL+ G   +  P    +   + + +   +
Sbjct:    34 LSVRAQQLEPSVTLAVSDLARELLNKGHDVISLSAGEPDFDTPDFIKQSAIKAIQE-GFT 92

Query:    63 KYGADEGLPELRDALVKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
             KY   +G P L+ A+V KL ++N L Y+ S ++V+ GA Q+  N+++   +AGD  ++ A
Sbjct:    93 KYTNVDGTPALKAAIVHKLKRDNHLNYEPSEILVSGGAKQSIYNVLMGTLNAGDEAIIPA 152

Query:   121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
             PY+ +     Q+     I++     +        L + +   P  +L+ + +P NPSG  
Sbjct:   153 PYWVSYPPMVQLAEAKPIIISATIDQNFKLTPGQLSQAIT--PQSRLLILNSPNNPSGVA 210

Query:   181 IPERLLKRISDLCKAAGSWLVVDNTYFMYD--GRK------HCCVE-GDHVVNLFSFSKA 231
               E  LK ++D+       L++ +  + Y   G+       + C E  D  + +   SKA
Sbjct:   211 YTESELKALADVLMEHPQILILSDEIYEYILWGQNRFVNILNVCPELRDRTIIINGASKA 270

Query:   232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL--QTGP-EWVTER 288
             Y M GWR+GY A P  +      + K+Q       + I+Q  A  +L  Q G   ++ E 
Sbjct:   271 YAMTGWRIGYAAGPKSI---IQAMKKIQSQSTSSPNSIAQVAATTALGAQRGDFAYMYEA 327

Query:   289 VKDLVRNREIIREALSPL-GEGAVKGGEGAIYLW----ARLPEKHL-DDFEVVRWLAHRH 342
              K      +++ +AL+ + G   +   +GA YL+    A + +  L DD ++  +L  + 
Sbjct:   328 YKT---RHDLVLKALNQMKGVHCIPA-DGAFYLFPDVSAAIQQLGLEDDIKLGTYLLDKT 383

Query:   343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
              V V+PG A G  GH+R+S        C  + ++L+  LE L
Sbjct:   384 KVAVVPGSAFGSPGHVRLS--------CATSTEKLQEALERL 417

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

UNIPROTKB|P96847 aspB "Possible aspartate aminotransferase AspB (Transaminase A) (ASPAT) (Glutamic--oxaloacetic transaminase) (Glutamic--aspartic transaminase)" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 101/330 (30%), Positives = 151/330 (45%)

Query:    64 YGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
             Y    G+PELRDA+     + + +     +V++T G++  F+   L   DAGD V M +P
Sbjct:    64 YSVALGIPELRDAIAADYQRRHGITVEPDAVVITTGSSGGFLLAFLACFDAGDRVAMASP 123

Query:   122 YY--FNSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
              Y  + + +S     V  I   PC  +T   P A  L    E  P  + V V +P NP+G
Sbjct:   124 GYPCYRNILSALGCEVVEI---PCGPQTRFQPTAQMLA---EIDPPLRGVVVASPANPTG 177

Query:   179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--RKHCCVEGD-HVVNLFSFSKAYG 233
             T IP   L  I+  C A+   L+ D  Y   +Y G  +  C  +   + V + SFSK Y 
Sbjct:   178 TVIPPEELAAIASWCDASDVRLISDEVYHGLVYQGAPQTSCAWQTSRNAVVVNSFSKYYA 237

Query:   234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 293
             M GWR+G++  P+ +   A   L    N  IC  ++SQ +A  S  T PE   E   +L 
Sbjct:   238 MTGWRLGWLLVPTVLRR-AVDCLT--GNFTICPPVLSQ-IAAVSAFT-PEATAEADGNLA 292

Query:   294 R---NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG- 349
                 NR ++ + L  +G   +   +GA Y++A + +   D       L    GV + PG 
Sbjct:   293 SYAINRSLLLDGLRRIGIDRLAPTDGAFYVYADVSDFTSDSLAFCSKLLADTGVAIAPGI 352

Query:   350 GACGCRG--HLRISFGGLVEDDCKAAADRL 377
                  RG   +RISF G    D + A  R+
Sbjct:   353 DFDTARGGSFVRISFAG-PSGDIEEALRRI 381

GO:0005618 "cell wall" evidence=IDA

TIGR_CMR|NSE_0758 NSE_0758 "aspartate aminotransferase" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]

 Score = 279 (103.3 bits), Expect = 2.1e-23, P = 2.1e-23
 Identities = 101/374 (27%), Positives = 165/374 (44%)

Query:    21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
             ++ EL    K+ +SL  G   +  P +  E   + + D     Y    G   LR+ +  K
Sbjct:    20 RVCELRARGKDVISLCIGEPDFSTPFLGQEMAIQAIKDCD-DNYSPVAGTMVLREEIAAK 78

Query:    81 LNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
               ++N L+ S   ++V  GA Q   N++  + +  D VV+ APY+  SY           
Sbjct:    79 FVRDNALHYSPHEIVVGNGAKQVLYNVLGAILNPEDEVVLIAPYWV-SYCEIVRIFSGKP 137

Query:   139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
             +V P S+K    D   + + L TK   K + + +P NPSG    E  L+ ++   +A   
Sbjct:   138 VVVP-STKKFRIDITAIREALNTKT--KAILINSPNNPSGVCYEESELRDLASALRAHPQ 194

Query:   199 -WLVVDNTY--FMYDGRKHCCVE------GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249
               ++ D+ Y    Y       +       G+ ++ +   SK Y M GWRVGY A P++  
Sbjct:   195 VHIISDDIYEHITYAESSFLNIANVAPELGERIILVNGVSKCYAMTGWRVGYAAIPNKA- 253

Query:   250 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309
                + + ++Q++       I+Q  AL +L++G + ++ER+    R R    E LS L E 
Sbjct:   254 -VISLVCRLQEHSTFGVCTIAQAAALGALRSGADVLSERLAVFARKRNKAVEVLSMLPEL 312

Query:   310 AVKGGEGAIYLW----ARLPEKHLDDFEV------VRWLAHRHGVVVIPGGACGCRGHLR 359
                  +G  YL+    A   +K    FEV        +L   H V V+PG   G  G+ R
Sbjct:   313 CCYKPDGGFYLFLSCSAFFGKKSPSGFEVKTDSDVADYLLEEHAVAVVPGEEFGVPGYFR 372

Query:   360 ISFG---GLVEDDC 370
             IS+     L+E  C
Sbjct:   373 ISYALSMDLLEQAC 386

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

TIGR_CMR|ECH_0732 ECH_0732 "aspartate aminotransferase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 279 (103.3 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 99/383 (25%), Positives = 182/383 (47%)

Query:    16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRD 75
             + I  Q Q+L     + +SL+ G   +  P+   +   + + +   +KY A  G+ EL+ 
Sbjct:    17 LEIANQAQKLKMSGVDVISLSAGEPDFDTPQHIKQAAIDAI-NSGKTKYTAVNGIIELKK 75

Query:    76 ALVKKLNQENKL-YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
              ++ +  Q++ L Y  + + V  GA Q   N+ +   ++GD V++ +PY+ +     +++
Sbjct:    76 VIIDRFKQDHDLIYNVNQISVGNGAKQCIYNLFMATINSGDEVIIPSPYWVSYPDVVKIS 135

Query:   134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD-L 192
             G   ++V    +  L PD   LE  + T+ T  L+ + +P NP+G       LK I++ L
Sbjct:   136 GGNPVIVDCGETFKLTPDI--LESVI-TEKTKWLI-MNSPNNPTGLVYTYEELKSIAEVL 191

Query:   193 CKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGYIAY 244
              K    +++ D+ Y   +YD  +   +        D V  +   SKAY M GWR+GYIA 
Sbjct:   192 LKYPNIYVMTDDIYSKIIYDDLEFFTIAQVEPRLYDRVFTINGVSKAYAMTGWRIGYIAG 251

Query:   245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
              S V    + +  +Q       + I+Q  ++ +L    E++ ER K     R+++ + ++
Sbjct:   252 DSRV---ISAISVIQSQSTTNPNSIAQFASIQALAGDQEFLKERNKIFAARRDMMVDMVN 308

Query:   305 PLGEGAVKGGEGAIYLWA---RLPEKHLDDFEVV-------RWLAHRHGVVVIPGGACGC 354
                  +VK  +GA Y++    +L  K   +  V+       ++L   + V V+PG A G 
Sbjct:   309 NTSLLSVKKPQGAFYVFISCKKLIGKSTRNGLVINSAMDFTKYLLEDYNVAVVPGEAFGA 368

Query:   355 RGHLRISFGGLVEDDCKAAADRL 377
             +G  RIS+    E   KA  DR+
Sbjct:   369 QGFFRISYATSTEHLSKAC-DRI 390

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=ISS

GO:0006532 "aspartate biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I1115 SubName- Full=Putative uncharacterized protein; (394 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	398
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	7e-90
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	5e-83
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	6e-79
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	6e-69
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	2e-57
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	7e-55
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	9e-36
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	1e-34
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	9e-33
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	3e-32
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	9e-32
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	5e-30
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	5e-30
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	8e-29
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	8e-28
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	1e-27
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	4e-27
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	3e-26
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	3e-26
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	4e-26
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	3e-24
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	8e-24
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	1e-23
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	5e-23
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	6e-23
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	5e-21
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	1e-20
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	7e-20
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	7e-20
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	1e-19
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	3e-19
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	4e-19
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	2e-18
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	1e-17
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	3e-17
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	5e-17
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	6e-17
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	2e-16
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	3e-16
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	2e-14
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	6e-13
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	2e-12
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	3e-12
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	4e-12
PLN02231	534	PLN02231, PLN02231, alanine transaminase	4e-12
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	4e-12
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	5e-12
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	1e-11
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	2e-11
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	3e-11
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	3e-11
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	4e-11
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	5e-11
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	1e-10
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-10
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	2e-10
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	3e-10
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	3e-10
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	5e-10
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	5e-10
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	6e-10
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	1e-09
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	1e-09
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-09
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	5e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	6e-09
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	1e-08
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	2e-08
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	5e-08
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	6e-08
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	7e-08
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	2e-07
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	3e-07
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	4e-07
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	6e-07
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	7e-07
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	1e-06
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	1e-06
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	1e-06
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	2e-06
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	2e-06
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	2e-06
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	3e-06
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	4e-06
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	5e-06
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	6e-06
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	2e-05
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	3e-05
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	3e-05
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	3e-05
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	4e-05
PRK05939	397	PRK05939, PRK05939, hypothetical protein; Provisio	4e-05
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	7e-05
COG2873	426	COG2873, MET17, O-acetylhomoserine sulfhydrylase [	9e-05
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	1e-04
pfam01053	382	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP	1e-04
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	1e-04
PRK08133	390	PRK08133, PRK08133, O-succinylhomoserine sulfhydry	6e-04
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	0.002

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score =  276 bits (707), Expect = 7e-90
 Identities = 133/388 (34%), Positives = 215/388 (55%), Gaps = 29/388 (7%)

Query: 17  PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDA 76
           PI+  + +L+R     +SL QGVV + PP  A+E +   + +P   KY A +G+P L +A
Sbjct: 14  PIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEA 73

Query: 77  LVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           + +KL Q+N +    + +++VTAG+N AF+N +L + D GD +++  PYYFN  M+  M 
Sbjct: 74  ITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA 133

Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV--NPGNPSGTYIPERLLKRISD 191
           G   ILV    +  L P+A      +E   TPK  ++V  +P NP+G   PE LL+ ++ 
Sbjct: 134 GCQPILVPTDDNYQLQPEA------IEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQ 187

Query: 192 LCKAAGSWLVVDNTY--FMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAY 244
           +C   G + + D  Y  F YDG KH         G+H ++L+S SKAYG   WR+GY+  
Sbjct: 188 ICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI 247

Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P         + K+QD I IC  ++SQ+ AL +LQ G  +  + + ++ + R+I+ ++L 
Sbjct: 248 P---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLG 304

Query: 305 PLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLR 359
            L +   +    GA Y + ++    L+DFE+V+ L   + V VIPG   G    C  +LR
Sbjct: 305 QLQDRCTLHPANGAFYCFLKV-NTDLNDFELVKQLIREYRVAVIPGTTFGMKNGC--YLR 361

Query: 360 ISFGGLVEDDCKAAADRLRRGLEELVKD 387
           I++G L +   K   +RL +GL+ +V+ 
Sbjct: 362 IAYGALQKATAKEGIERLVQGLKTIVQQ 389

Length = 389

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  257 bits (658), Expect = 5e-83
 Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 17/357 (4%)

Query: 33  VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS 90
           + L+ G   + PP   +E +        +  Y  D GLPELR+A+ + L +   +     
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE 60

Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150
            ++VT GA +A   ++  L + GD V++  P Y     + ++ G   + V P   +    
Sbjct: 61  EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGGFL 119

Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208
               L +  +T  T KL+ + NP NP+G  + E  L+ +++L K  G  ++ D  Y   +
Sbjct: 120 LDLELLEAAKTPKT-KLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV 178

Query: 209 YDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
           YDG     +      + V+ L SFSK +G+ G R+GY+  P E      +L K+      
Sbjct: 179 YDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEE--LLERLKKLLPYTTS 236

Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324
             S +SQ  A  +L  G E + E  +   R R+ + EAL  LG   V    G  +LW  L
Sbjct: 237 GPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296

Query: 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRR 379
           PE   DD E +  L    GVVV PG A G    G +R+SF    E++ + A +RL  
Sbjct: 297 PE--GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  248 bits (635), Expect = 6e-79
 Identities = 111/399 (27%), Positives = 184/399 (46%), Gaps = 28/399 (7%)

Query: 6   KLAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK 63
           +L K        ++ + +      G ++ + L+ G   +  P+  +E   E + +   + 
Sbjct: 2   RLLKVLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEG-GTH 60

Query: 64  YGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y    G+PELR+A+ +K  +   L    +  ++VTAGA +A     L L + GD V++  
Sbjct: 61  YTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPD 120

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLH--PDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           P Y +   + ++ G   + V P   +     PD + LE      P  K + + +P NP+G
Sbjct: 121 PGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEA--AITPKTKAIILNSPNNPTG 177

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSFSKA 231
               +  LK I +L +     ++ D  Y   +YDG +H          D  + + SFSK 
Sbjct: 178 AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKT 237

Query: 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERV 289
           YGM GWR+G++  P   E     L K++  +  CA   +Q+ A+ +L      E V E  
Sbjct: 238 YGMTGWRIGWVVGPP--EELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMR 295

Query: 290 KDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
           ++    R+++ EAL+ +G    VK  EGA YL+ ++PE  LD  E  + L    GV V+P
Sbjct: 296 EEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE-LLDSEEFAKKLLEEAGVAVVP 354

Query: 349 G---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           G   G     G++R+S     E   + A  RL R L E 
Sbjct: 355 GSGFGEPPGEGYVRLSLATSEETL-EEALRRLARFLAEY 392

Length = 393

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score =  222 bits (567), Expect = 6e-69
 Identities = 114/382 (29%), Positives = 173/382 (45%), Gaps = 30/382 (7%)

Query: 17  PIMVQIQELVRGAKNA----VSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGADEGLP 71
           PI  +++  + G   A    + L+Q V  Y  PP++ +  + E   DP+   YG  EGLP
Sbjct: 13  PIP-EVRAWLAGYDGADGPLIDLSQAVPGYPPPPEL-LRALAEAAADPAAHLYGPVEGLP 70

Query: 72  ELRDALVKKLNQENKLYK-----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           ELR+A     ++   LY        V +T+G NQAF   ++TL  AGD V++  P+YFN 
Sbjct: 71  ELREAYAAHYSR---LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNH 127

Query: 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
            M   M G+  + +       L PD    E  +   P  + +++V P NP+G   P  LL
Sbjct: 128 KMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALI--TPRTRAIALVTPNNPTGVVYPPELL 185

Query: 187 KRISDLCKAAGSWLVVDNTYFMYD---GRKHCCVE----GDHVVNLFSFSKAYGMMGWRV 239
             + DL +  G  L++D TY  +D   G  H         D +V+L+SFSK+Y + G RV
Sbjct: 186 HELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRV 245

Query: 240 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299
           G +           ++ K  D + ICA  I Q    + L    +W      ++ R R+  
Sbjct: 246 GAVVASPA---RIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAF 302

Query: 300 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGH 357
           R   + L  G      GA + + R P       EV R LA   G++ +PG   G    G+
Sbjct: 303 RAVFARL-PGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGY 361

Query: 358 LRISFGGLVEDDCKAAADRLRR 379
           LR++F            +RLR 
Sbjct: 362 LRLAFANADVAGIGELVERLRA 383

Length = 386

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  192 bits (490), Expect = 2e-57
 Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 34/343 (9%)

Query: 63  KYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           KY    G+PELR+A+  KL ++N L Y  S V+VT GA QA  N  + L D GD V++ A
Sbjct: 63  KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPA 122

Query: 121 PYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           PY+  SY    ++ G   + V P   +       + LE  + T  T K + + +P NP+G
Sbjct: 123 PYWV-SYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEAAI-TPKT-KALILNSPSNPTG 178

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEG--DHVVNLFSFSK 230
                  L+ I+D+      W++ D  Y   +YDG +            D  + +  FSK
Sbjct: 179 AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSK 238

Query: 231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVK 290
           AY M GWR+GY A P E+      + K+Q +     + I+Q+ A+ +L    + V E  +
Sbjct: 239 AYAMTGWRLGYAAGPKEL---IKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQ 295

Query: 291 DLVRNREIIREALSPLGEGAVKG-----GEGAIYLWAR----LPEKHLDDFEVVRWLAHR 341
                R+++ + L+      + G      EGA Y++      L +   D  E    L   
Sbjct: 296 AFEERRDLMVDGLN-----EIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEE 350

Query: 342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
            GV V+PG A G  G++R+S+     +D +   +R+ R LE L
Sbjct: 351 AGVAVVPGIAFGAPGYVRLSY-ATSLEDLEEGLERIERFLESL 392

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  184 bits (470), Expect = 7e-55
 Identities = 95/351 (27%), Positives = 157/351 (44%), Gaps = 23/351 (6%)

Query: 42  WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGA 98
                   +  K+ +   + + YG  +GLPELR+AL K L +   L    +++V+  +GA
Sbjct: 15  SGTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGA 74

Query: 99  NQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157
                 ++  L  + GD++++ AP Y +    F++ G   +     SS   H D D LE 
Sbjct: 75  GANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYPLYSSNDFHLDFDALEA 134

Query: 158 TLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH 214
            L+      K+V   +P NP+GT      L+++ DL K     L+VD  Y  F++     
Sbjct: 135 ALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLVDEAYAGFVFGSLDA 194

Query: 215 CCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 269
                   EG +++ + SFSKA+G+ GWRVGYI   + V    +QL K+    P  +S  
Sbjct: 195 VATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAV---ISQLRKLAR--PFYSSTH 249

Query: 270 SQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326
            Q  A  +L         + E  + +   R+ +R+ L   G  +V   +   +L   L  
Sbjct: 250 LQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGL-SVLPSQAGFFLLTGLDP 308

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377
           +       V  L    GV V PG + G  G LRI+  G  E++ +   + +
Sbjct: 309 EAALALAQV--LLEEVGVYVTPGSSFGGPGWLRITVAGGTEEELEELLEAI 357

Length = 357

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  135 bits (343), Expect = 9e-36
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 34/342 (9%)

Query: 64  YGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           YG   GLPELR+A+   L            +++T+GA QA   ++  L D GD+V++  P
Sbjct: 128 YGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDP 187

Query: 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP--GNPSGT 179
            Y  +  + +  G   I V P     + P+A  LE+ L     PK V  V P   NP+G 
Sbjct: 188 TYPGALQALEALGARVIPV-PVDEDGIDPEA--LEEALAQWK-PKAV-YVTPTFQNPTGV 242

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSK--A 231
            +     K +  L +     ++ D+ Y    YDG     +        V+ L SFSK  A
Sbjct: 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA 302

Query: 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERV 289
            G+   R+GY+  P E+     +LL+++    +  S +SQ      L +G     +    
Sbjct: 303 PGL---RLGYVVAPPEL---IEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLR 356

Query: 290 KDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 347
           ++  R R+ + EAL+            EG ++LW  LPE  +D  E++   A   GVVV 
Sbjct: 357 REYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GIDARELLA-AALEKGVVVT 414

Query: 348 PGGA-----CGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           P G+        R  LR+SF    E++ +    RL   L E 
Sbjct: 415 PLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456

Length = 459

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  131 bits (333), Expect = 1e-34
 Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 53/374 (14%)

Query: 43  QP----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAG 97
           QP    P++  E +K    D  +  Y   +G+PELR+A  K   +    +    +++T G
Sbjct: 39  QPDIKTPEVFFEAIKNY--DEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNG 96

Query: 98  ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKT---LH-PDA 152
            ++A +  ++ +CD GD +++  P+Y N Y  F    GV    + P ++K     H P  
Sbjct: 97  GSEAILFAMMAICDPGDEILVPEPFYAN-YNGFATSAGVK---IVPVTTKIEEGFHLPSK 152

Query: 153 DWLEKTLETKPTPK----LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206
           + +EK      TPK    L+S  NPGNP+G    +  L+ ++++ K    +L+ D  Y  
Sbjct: 153 EEIEK----LITPKTKAILIS--NPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYRE 206

Query: 207 FMYDGRKH---CCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-QD 260
           F+YDG K+     +EG  D V+ + S SK Y   G R+G +   S+ +      +K+ Q 
Sbjct: 207 FVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI--SKNKELIAAAMKLCQA 264

Query: 261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIY 319
              +    + Q  A   L T   +  E  ++  + R+I+ E L+ +  G V +  +GA Y
Sbjct: 265 R--LSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKI-PGVVCEKPKGAFY 321

Query: 320 LWARLPEKHLDDFEVVRWLA---HRHG--VVVIPGG---ACGCRGH--LRISFGGLVEDD 369
           + A+LP    +DF   +WL    + +G  V+V P     A    G   +RI++  L E+D
Sbjct: 322 IIAKLPVDDAEDF--AKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY-VLNEED 378

Query: 370 CKAAADRLRRGLEE 383
            K A + L+  LE+
Sbjct: 379 LKRAMEILKEALEK 392

Length = 397

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score =  126 bits (318), Expect = 9e-33
 Identities = 97/334 (29%), Positives = 140/334 (41%), Gaps = 29/334 (8%)

Query: 64  YGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           Y A  GLP LR+A+     Q   +      ++VT G + A +     L D G   ++  P
Sbjct: 65  YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADP 124

Query: 122 YY-FNSYMSFQMTGVTH-ILVGPCSSKTLHP---DADWLEKTLETKPTPKLVSVVNPGNP 176
            Y  N +    + G    + VGP S   L P   +  W   T+          V +P NP
Sbjct: 125 GYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVG-------ALVASPANP 177

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSFSKAYG 233
           +GT +    L  +S   +A G  LVVD  Y    Y       +E  D    L SFSK +G
Sbjct: 178 TGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFG 237

Query: 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT---ERVK 290
           M GWR+G++  P        +L K+  N+ I AS  +QH AL   +  PE +     R  
Sbjct: 238 MTGWRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFE--PETLAILEARRA 292

Query: 291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG 350
           +  R R+ +  AL  LG G     +GA YL+A +     D F   R       V   PG 
Sbjct: 293 EFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGL 352

Query: 351 ACGC---RGHLRISFGGLVEDDCKAAADRLRRGL 381
             G      H+R ++   +    + A +R+ RGL
Sbjct: 353 DFGRHQAGQHVRFAYTQSLP-RLQEAVERIARGL 385

Length = 387

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  124 bits (313), Expect = 3e-32
 Identities = 87/362 (24%), Positives = 157/362 (43%), Gaps = 31/362 (8%)

Query: 28  GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
           G    + L+     + PP   +E ++  +    +++Y  D    ELR AL +     +  
Sbjct: 20  GLPGIIKLSSNENPYGPPPKVIEAIRAAL--DKLNRYP-DPDYRELRAALAEYYGVVDP- 75

Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT 147
              +V+V  G+++    +V    + GD+V++  P +    ++ Q+ G   + V     K 
Sbjct: 76  --ENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV---PLKE 130

Query: 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF 207
              D D +   +  +   KLV + NP NP+GT +P   L+ + +     G  +V+D  Y 
Sbjct: 131 FRLDLDAILAAI--RDKTKLVFLCNPNNPTGTLLPREELRALLEALP-EGGLVVIDEAYI 187

Query: 208 MYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPI 264
            +             +++ L +FSKA+G+ G RVGY IA P         L KV+    +
Sbjct: 188 EFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP----ELIAALNKVRPPFNV 243

Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 324
             S  +   A+ +L+   +++ E V+ +   RE +  AL  LG   V   + A ++  R+
Sbjct: 244 --SSPALAAAIAALRD-ADYLEESVERIREERERLYAALKALGLFGVFPSQ-ANFVLVRV 299

Query: 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           P+       +   L  +  +V          G+LRI+ G   E+      DRL   L E+
Sbjct: 300 PDAEAAA--LAEALLKKGILVRDCSSVGLLPGYLRITVGTPEEN------DRLLAALREV 351

Query: 385 VK 386
           +K
Sbjct: 352 LK 353

Length = 356

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  123 bits (311), Expect = 9e-32
 Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 47/391 (12%)

Query: 21  QIQELVRGA---KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           +I+EL   A   +N +SL  G   +  PK   E  K  + D   + Y  + G+PELR+A+
Sbjct: 21  KIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRAL-DEGWTHYTPNAGIPELREAI 79

Query: 78  VKKLNQENKLYK-----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
            +      K Y       +V+VTAGA +A      +L + GD V++  P +       ++
Sbjct: 80  AEYYK---KFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKI 136

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
                I +         PD D L + + TK T +++ +  P NP+G  + + + K I+D+
Sbjct: 137 AEAKPIRIPLREENEFQPDPDELLELI-TKRT-RMIVINYPNNPTGATLDKEVAKAIADI 194

Query: 193 CKAAGSWLVVDNTY--FMYDGRKHCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
            +    +++ D  Y  F+Y+G KH  +     D+ +   SFSK + M GWR+G++  P +
Sbjct: 195 AEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQ 254

Query: 248 VEGFATQLLKVQDNIPICASIIS------QHLALYSLQTGPEW--VTERVKDLVRNREII 299
           V         ++D I + A II       Q   + +L++   W  V E  K+    R+++
Sbjct: 255 V---------IKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLV 305

Query: 300 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGH 357
            + L  +    V   +GA Y++A + E  +   +   WL  +  VVVIPG A G    G+
Sbjct: 306 LKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGY 365

Query: 358 LRISFG----GLVEDDCKAAADRLRRGLEEL 384
           +RIS+      L+E     A +R+ + LEEL
Sbjct: 366 IRISYATSKEKLIE-----AMERMEKALEEL 391

Length = 391

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score =  119 bits (299), Expect = 5e-30
 Identities = 104/389 (26%), Positives = 169/389 (43%), Gaps = 50/389 (12%)

Query: 21  QIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWDPSISKYGADEGLPELRDA 76
           Q   +V+   N +SL  G    QP    P    E  K  +   + + Y  + GL ELR A
Sbjct: 19  QFSNMVQNYDNLISLTIG----QPDFPTPSHVKEAAKRAI-TENYTSYTHNAGLLELRKA 73

Query: 77  LVKKLNQENKLY---KSSVMVTAGANQAFVNIVL-TLCDAGDSVVMFAPYYFNSYMSFQM 132
               +  +  L+   +S ++VT GA++A ++I   T+ + G  V++ AP Y       ++
Sbjct: 74  ACNFVKDKYDLHYSPESEIIVTIGASEA-IDIAFRTILEPGTEVILPAPIYPGYEPIIRL 132

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV--NPGNPSGTYIPERLLKRIS 190
            G   + +    S      A+ LE  +    T K   VV   P NP+G  + +  L+ I+
Sbjct: 133 CGAKPVFID-TRSTGFRLTAEALENAI----TEKTRCVVLPYPSNPTGVTLSKEELQDIA 187

Query: 191 DLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGYI 242
           D+ K    +++ D  Y   +Y+                 V+N    SK++ M GWR+G++
Sbjct: 188 DVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVIN--GLSKSHSMTGWRIGFL 245

Query: 243 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVK---DLVRNR 296
             PS +   A  +LKV      CAS ISQ+ AL +L  G    + +  + K   D V NR
Sbjct: 246 FAPSYL---AKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNR 302

Query: 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--C 354
                 L  +G    K   GA YL+  +    +  F+    L    G+ V+PG A     
Sbjct: 303 ------LISMGLDVEK-PTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYG 355

Query: 355 RGHLRISFGGLVEDDCKAAADRLRRGLEE 383
            G++R+S+     +  K   DRL   L++
Sbjct: 356 EGYVRLSY-AYSIETLKEGLDRLEAFLQQ 383

Length = 387

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  119 bits (299), Expect = 5e-30
 Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 65/397 (16%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY----------WQPPKMAMEKVKEL 55
           + ++RA+  E  I    +++V  A+        V+           +QPP    E +KE 
Sbjct: 3   RASERAMGVEYAI----RDVVLPARELEKKGIKVIRLNIGDPVKFDFQPP----EHMKEA 54

Query: 56  VWDPSISK----YGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTL 109
               +I +    YG  EGLPELR+A+VK+  ++N +  +   V VTA   +A   I   L
Sbjct: 55  YCR-AIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL 113

Query: 110 CDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTL-----HPDADWLEKTLETK 162
            D GD +++  P Y  +   + F   GV      P   +T+      PD D + K +  K
Sbjct: 114 LDPGDEILIPGPSYPPYTGLVKFY-GGV------PVEYRTIEEEGWQPDIDDIRKKITEK 166

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV 217
              K ++V+NP NP+G    ++ LK I D+       ++ D  Y    Y+G KH     +
Sbjct: 167 T--KAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSL 223

Query: 218 EGD-HVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLLKVQDNIP------ICASI 268
             D  V+ +   SK Y   GWR+GYI +  P        +L +V++ I       +C + 
Sbjct: 224 TKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEG------KLAEVREAIDKLARIRLCPNT 277

Query: 269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-K 327
            +Q  A+  L    +++ E +K L   R+ I + L+ +   +    +GA Y++ R+ E  
Sbjct: 278 PAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGP 337

Query: 328 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISF 362
             DD E V  + H   V+ + G   G    GH R+ F
Sbjct: 338 WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF 374

Length = 398

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score =  115 bits (291), Expect = 8e-29
 Identities = 106/369 (28%), Positives = 177/369 (47%), Gaps = 51/369 (13%)

Query: 44  PPKMAMEKVKELVW--DPSISKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGAN 99
           PP    E ++EL    DP +  Y  + G PE+R+A+ + LN+     L    +++T GA 
Sbjct: 47  PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106

Query: 100 QAFVNIVL-TLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEK 157
            A +N+ L  + + GD V++FAPY F  Y  +    G   ++V P  + T  PD D LE 
Sbjct: 107 GA-LNVALKAILNPGDEVIVFAPY-FVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEA 163

Query: 158 TLETKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGS------WLVVDNTY--F 207
            +    TPK  +V+  +P NP+G    E  LK ++ L +          +L+ D  Y   
Sbjct: 164 AI----TPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREI 219

Query: 208 MYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---------FATQLL 256
           +YDG +   +    D+ + ++SFSK+  + G R+GYIA   E+E          FA ++L
Sbjct: 220 VYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRIL 279

Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316
                  + A  + Q +    L       T  V    RNR+++ + L+ LG   VK  +G
Sbjct: 280 GF-----VNAPALMQRVVAKCLD-----ATVDVSIYKRNRDLLYDGLTELGFECVKP-QG 328

Query: 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD-CKAAAD 375
           A YL+ + PE+  DD       A +H ++++PG   GC G+ R+S+   V+ +  + +  
Sbjct: 329 AFYLFPKSPEE--DDVAFCE-KAKKHNLLLVPGSGFGCPGYFRLSY--CVDTETIERSLP 383

Query: 376 RLRRGLEEL 384
              +  +E 
Sbjct: 384 AFEKLAKEY 392

Length = 394

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score =  112 bits (283), Expect = 8e-28
 Identities = 98/340 (28%), Positives = 165/340 (48%), Gaps = 22/340 (6%)

Query: 58  DPSISKYGADEGLPELRDALVKKLNQENKL-YK--SSVMVTAGANQAFVNIVLTLCDAGD 114
           D + S Y    GL ELR A    + ++  L Y   + ++VT GA +A    +  + + GD
Sbjct: 57  DANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGD 116

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKT-LETKPTPKLVSVVN 172
            V++ AP Y        + G   + +    +   L P+   LEK  LE     K V +  
Sbjct: 117 KVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEM--LEKAILEQGDKLKAVILNY 174

Query: 173 PGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG---DHVVNLF 226
           P NP+G TY  E+ +K ++D+ K    +++ D  Y    Y G  H  +     D  + + 
Sbjct: 175 PANPTGVTYSREQ-IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILIN 233

Query: 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 286
             SK++ M GWR+G I  P+E   F  QL+K    +   A+ ++Q  A+ +L  G +   
Sbjct: 234 GLSKSHAMTGWRIGLIFAPAE---FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDAL 290

Query: 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV 345
              K+ ++ R+ I E ++ LG   +K  +GA Y++A++P   + D F+ ++  A +  V 
Sbjct: 291 PMKKEYIKRRDYIIEKMTDLGFKIIK-PDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA 349

Query: 346 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383
            IPG A G    G++R+S+   +E   K A  RL+  +EE
Sbjct: 350 FIPGAAFGPYGEGYVRLSYAASME-TIKEAMKRLKEYMEE 388

Length = 391

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score =  112 bits (281), Expect = 1e-27
 Identities = 112/401 (27%), Positives = 178/401 (44%), Gaps = 44/401 (10%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP-- 59
           +LA R    E    M +  + Q L R  ++ + +  G    +P   A E V E       
Sbjct: 2   RLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIG----EPDFTAPEPVVEAAARALR 57

Query: 60  -SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSV 116
             +++Y +  GL  LR+A+     +   L      ++VTAGA+ A +   L L + GD V
Sbjct: 58  RGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEV 117

Query: 117 VMFAPYY-FNSYMSFQMTGVTHIL-VGPCSSKTLHPD---ADWLEKTLETKPTPKLVSVV 171
           +M  P Y  N +      G   ++  GP     L      A W E+T       + V + 
Sbjct: 118 LMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERT-------RGVLLA 170

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSF 228
           +P NP+GT I    L+RI +  +A G + +VD  Y    YD      +  GD V+ + SF
Sbjct: 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSF 230

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE- 287
           SK + M GWR+G++  P   E       K+  N+ ICAS ++QH AL   +  P+ +   
Sbjct: 231 SKYFNMTGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFE--PDTLAIY 285

Query: 288 --RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA---RLPEKHL-DDFEVVRWLAHR 341
             R  +  R R+ I  AL  LG       +GA Y++A    +      D   + + + H 
Sbjct: 286 ERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHD 345

Query: 342 HGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 379
            GVV++PG   G    R ++R+S+   +    + A  RL +
Sbjct: 346 AGVVLVPGRDFGPHAPRDYIRLSYATSM-SRLEEAVARLGK 385

Length = 388

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  110 bits (278), Expect = 4e-27
 Identities = 87/398 (21%), Positives = 164/398 (41%), Gaps = 45/398 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQG----VVYWQPPKMAMEKVKELVWDPSI 61
            LAK+  + E+ IM +I  L +   + + L+ G    +        A E  K+       
Sbjct: 5   FLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKK-----GH 59

Query: 62  SKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
           ++Y    G  EL + ++K    +N       + +M T GA       + ++ D GD V++
Sbjct: 60  TRYTDSGGDVELIEEIIK-YYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVII 118

Query: 119 FAPYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
             PY F  Y    +M G   I++          +   LE  + +K   K + + +P NP+
Sbjct: 119 HEPY-FTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKT--KAIILNSPNNPT 175

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMY----------DGRKHCCVEGDHVVNL 225
           G    +  L+ I+ +      +++ D  Y  F +           G        +  +  
Sbjct: 176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP------ERTITF 229

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEW 284
            SFSK + M GWR+GY+  P     +  +  K + + I   A  ISQ  A+Y+L+     
Sbjct: 230 GSFSKDFAMTGWRIGYVIAPD----YIIETAKIINEGICFSAPTISQRAAIYALKHRDTI 285

Query: 285 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344
           V    ++  +  E   + +  +   ++   +G+IY +  + +  L   E    L     V
Sbjct: 286 VPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHV 345

Query: 345 VVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 379
           +VIPG   G  G  G++R++   +  +  + A +R+ +
Sbjct: 346 LVIPGKAFGESG-EGYIRLA-CTVGIEVLEEAFNRIEK 381

Length = 384

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score =  107 bits (270), Expect = 3e-26
 Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 29/341 (8%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E +  LV+    S      G   LR A+  +    +      VM T G+++A   ++  L
Sbjct: 38  EDLDALVFRDGPS-----LGGEGLRAAIADRWRGGDA---HVVMTTHGSSEAIYLVLTAL 89

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
              GD VV+  P Y +       TG         + +   PD D L   L   P  + V 
Sbjct: 90  LRPGDEVVVVDPAYHSLSHLAVATGCEVRPWPLLAVRGFRPDLDALRALL--TPRTRAVV 147

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--KHCCVEGDHVVNL 225
           V  P NP+G  +  R L  + +    +G+ L+ DN +   ++D           D V++ 
Sbjct: 148 VNFPHNPTGASVTPRELDELLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDRVISF 207

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWV 285
            + SKA+G+ G RVG+   P+++     +L++++D   +  S + + LA  +++     +
Sbjct: 208 GTLSKAFGLPGLRVGWCVGPADL---LAELVRLRDYTTLSLSPLVELLAEVAVEHADALI 264

Query: 286 TERVKDLVRNREIIRE--ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343
             R+ +   NR  + +  A  P         EG +  + R P  H D  ++ R L  RHG
Sbjct: 265 GPRLAEARANRRRLLDWAAAHP-DVVRCTPPEGGVAAFPRFPG-HADVTDLCRRLLARHG 322

Query: 344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           V+++PG   G    +R+ FGG   +        LR GL  L
Sbjct: 323 VLLVPGSCFGAADRMRLGFGGSSAE--------LRAGLARL 355

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score =  108 bits (271), Expect = 3e-26
 Identities = 86/347 (24%), Positives = 138/347 (39%), Gaps = 66/347 (19%)

Query: 64  YGADEGLPELRDA---LVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           YG  EG PE ++A   L + +  EN      ++ T GA  A   ++  L + GD V+   
Sbjct: 58  YGWIEGSPEFKEAVASLYQNVKPEN------ILQTNGATGANFLVLYALVEPGDHVISVY 111

Query: 121 PYYFNSYMSFQMTGVT-HILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGN 175
           P Y   Y   +  G              L  +  WL    E     +P  KL+ + N  N
Sbjct: 112 PTYQQLYDIPESLGAEVDYW-------QLKEENGWLPDLDELRRLVRPNTKLICINNANN 164

Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLF-------SF 228
           P+G  +    L+ I ++ ++  ++++ D  Y   D           + +L+       S 
Sbjct: 165 PTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTP----SIADLYEKGISTNSM 220

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 288
           SK Y + G RVG+IA   EV      L K +D   ICA +    LA  +L+        R
Sbjct: 221 SKTYSLPGIRVGWIAANEEV---IDILRKYRDYTMICAGVFDDMLASLALE-------HR 270

Query: 289 VKDLVRNREIIREALSPLGE--------GAVKGGEGAI-YLWARLPEKHLDDFEVVRWLA 339
              L RNR+I+R  L+ L E          VK    +  ++   +        +    L 
Sbjct: 271 DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM---PSEDFCLKLL 327

Query: 340 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR--LRRGLEEL 384
              GV+++PG      GH+RI +            D   L++GL++L
Sbjct: 328 KETGVLLVPGNRFDLEGHVRIGY----------CCDTETLKKGLKKL 364

Length = 373

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  108 bits (271), Expect = 4e-26
 Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 44/339 (12%)

Query: 69  GLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           G+PELR+AL + ++   +L+  +     + VT+   QA +     L   GD VV   P +
Sbjct: 62  GIPELREALARYVS---RLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLW 118

Query: 124 FNSYMSFQMTG--VTHILVGPCSSK-TLHPDADWLEKTLETKPTP--KLVSVVNPGNPSG 178
            N   + ++ G  V  + +       TL  D D L   +    TP  + + + +P NP+G
Sbjct: 119 PNLVAAPKILGARVVCVPLDFGGGGWTL--DLDRLLAAI----TPRTRALFINSPNNPTG 172

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--------EGDHVVNLFSF 228
                  L+ I   C+  G W+V D  Y    Y                  D ++ + SF
Sbjct: 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP--GGRAPSFLDIAEPDDRIIFVNSF 230

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 288
           SK + M GWR+G++  P  +     +L  ++ N   C +   Q  A+ +L  G ++V E 
Sbjct: 231 SKNWAMTGWRLGWLVAPPALGQVLEKL--IEYNTS-CVAQFVQRAAVAALDEGEDFVAEL 287

Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
           V  L R+R+ + +AL  L    V   +GA+Y + R+P    D   + + L    G+ + P
Sbjct: 288 VARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIP-GVTDSLALAKRLVDEAGLGLAP 346

Query: 349 GGACGCRGH--LRISF---GGLVEDDCKAAADRLRRGLE 382
           G A G  G   LR  F      ++     A +RLRR L 
Sbjct: 347 GTAFGPGGEGFLRWCFARDPARLD----EAVERLRRFLA 381

Length = 382

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  102 bits (257), Expect = 3e-24
 Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 22/334 (6%)

Query: 64  YGADEGLPELRDALVKKLNQENKL-Y--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y A+ GL ELR  + K L +   + Y     ++VT GA+QA    +  + + GD V++  
Sbjct: 53  YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVE 112

Query: 121 PYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           P  F SY     + G   + V              +E  +  K   K + + +P NP+G 
Sbjct: 113 PS-FVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKT--KAILLCSPNNPTGA 169

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEG--DHVVNLFSFSKAYG 233
            + +  L+ I+ + +     ++ D  Y    YD        ++G  +  + +  FSK + 
Sbjct: 170 VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFA 229

Query: 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 293
           M GWR+G+IA P         +LK+     +CA  ++Q  AL +L+ G + V        
Sbjct: 230 MTGWRLGFIAAPVYFSEA---MLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYR 286

Query: 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---G 350
           + R     + + +G      G GA Y +  +    L   E    L     V V+PG   G
Sbjct: 287 KRRNFFVTSFNEIGLTCHVPG-GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG 345

Query: 351 ACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
             G  G +R S+   +E   + A  R++R +E  
Sbjct: 346 ESG-EGFIRCSYATSLE-QLQEAMKRMKRFVENK 377

Length = 378

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score =  101 bits (254), Expect = 8e-24
 Identities = 98/357 (27%), Positives = 150/357 (42%), Gaps = 53/357 (14%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G P LR A++ KL + N L+   + + V  GA QA    ++   +AGD V++ 
Sbjct: 64  TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIP 123

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTPKLVSVV--N 172
           APY+  SY  M     G   I+   C  +    L P+A      LE   TP+   ++   
Sbjct: 124 APYWV-SYPDMVLANDGTPVIV--ACPEEQGFKLTPEA------LEAAITPRTRWLILNA 174

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLV-VDNTYFMYDGRKHCCVEGDHVVNLFS---- 227
           P NP+G       L+ ++D+       LV  D+ Y       H   + +   +L +    
Sbjct: 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIY------DHIRFDDEPTPHLLAAAPE 228

Query: 228 ----------FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYS 277
                      SK Y M GWR+GY A P+        + K+Q     C S ISQ  A  +
Sbjct: 229 LRDRVLVTNGVSKTYAMTGWRIGYAAGPA---DLIAAINKLQSQSSSCPSSISQAAAAAA 285

Query: 278 LQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA--------RLPE-KH 328
           L     +VTE V    + R+     L+ +   +    +GA YL+           PE K 
Sbjct: 286 LNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKV 345

Query: 329 LD-DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           L+ D +VV +L    GV V+ G A G   + R+S      +  + A  R+ R +  L
Sbjct: 346 LETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI-ATSLETLEEACARIERAVAAL 401

Length = 402

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score =  100 bits (252), Expect = 1e-23
 Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 26/257 (10%)

Query: 63  KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
           KY   EG PELR+ ++K L  ++       ++TAGA ++   ++      GD+ V   P 
Sbjct: 61  KYPPPEGFPELRELILKDLGLDD----DEALITAGATESLYLVMRAFLSPGDNAVTPDPG 116

Query: 123 YF--NSYMSFQMTGVTHILV--GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
           Y   +++ S     V  + +    C+ K L P+         T+    L+ +++P NP G
Sbjct: 117 YLIIDNFASRFGAEVIEVPIYSEECNYK-LTPELVKENMDENTR----LIYLIDPLNPLG 171

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMM 235
           +   E  +K  +++ +   ++L+ D TY  +  R+H        +H V  +SFSK +GM 
Sbjct: 172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDF-AREHTLAAEYAPEHTVTSYSFSKIFGMA 230

Query: 236 GWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294
           G R+G  +A P  +E    + + + D   +  ++I+Q  A+  L+   EW+ +R++    
Sbjct: 231 GLRIGAVVATPDLIE--VVKSIVIND---LGTNVIAQEAAIAGLKVKDEWI-DRIRRTTF 284

Query: 295 -NREIIREALSPLGEGA 310
            N+++I+EA+  + EG 
Sbjct: 285 KNQKLIKEAVDEI-EGV 300

Length = 380

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 99.3 bits (248), Expect = 5e-23
 Identities = 90/342 (26%), Positives = 139/342 (40%), Gaps = 45/342 (13%)

Query: 32  AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-- 89
           AV+L QG      P   +E  +E +    +++Y    G+PELR A+     Q  + Y   
Sbjct: 26  AVNLGQGFPDEDGPPEMLEAAQEAIAG-GVNQYPPGPGIPELRAAIAA---QRRRRYGLE 81

Query: 90  ----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGPCS 144
               + V+VT GA +A    VL L + GD V++  PYY +SY     M G   + V    
Sbjct: 82  YDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYY-DSYAAVIAMAGAHRVPV---- 136

Query: 145 SKTLHP-------DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
              L P       D D L   +   P  + + V +P NP+GT +    L  I++L     
Sbjct: 137 --PLVPDGRGFALDLDALRAAV--TPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHD 192

Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VE 249
             ++ D  Y   ++DG +H  +       +  V + S +K + + GW++G+   P+  + 
Sbjct: 193 LLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIA 252

Query: 250 GF--ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
               A Q L      P       Q    ++L     WV      L   R+ +   L+  G
Sbjct: 253 AVRAAKQYLTYVGGAPF------QPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG 306

Query: 308 EGAVKGGEGAIYLWARL-PEKHLDDFEVVRWLAHRHGVVVIP 348
              V    G  +L A   P  + D  E  R L  R GV  IP
Sbjct: 307 FE-VHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIP 347

Length = 387

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 98.1 bits (245), Expect = 6e-23
 Identities = 72/338 (21%), Positives = 139/338 (41%), Gaps = 39/338 (11%)

Query: 42  WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101
           + PP  A E ++       + +Y  D    EL+ AL      + +     +++  G+++ 
Sbjct: 31  FGPPPKAKEALRAEA--DKLHRY-PDPDPAELKQALADYYGVDPE----QILLGNGSDEI 83

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLE 160
              ++    + GD+V++  P       ++ M  ++  + G    K   P D D      +
Sbjct: 84  IELLIRAFLEPGDAVLVPPP-------TYSMYEISAKIHGAEVVKV--PLDEDGQLDLED 134

Query: 161 TKPT----PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTYFMYDGRKHC 215
                   PKLV + +P NP+G  +    ++ + +        LVV D  Y  + G    
Sbjct: 135 ILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLER--TPEDALVVVDEAYGEFSGEPST 192

Query: 216 C---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 272
                E  +++ L + SKA+G+ G R+GY    +E+      L KV+    +  S ++Q 
Sbjct: 193 LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEI---IDALNKVRAPFNL--SRLAQA 247

Query: 273 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332
            A+ +L+   +++ + V+++   RE + + L  L    V   +   ++  R P      F
Sbjct: 248 AAIAALRD-DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN-FVLIRFPRDADALF 305

Query: 333 EVVRWLAHRHGVVVIP-GGACGCRGHLRISFGGLVEDD 369
           E         G++V       G    LRI+ G   E+D
Sbjct: 306 E----ALLEKGIIVRDLNSYPGLPNCLRITVGTREEND 339

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 93.6 bits (233), Expect = 5e-21
 Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 45/364 (12%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQA 101
               A E VK+ +     + Y    G    R+A+ + L+     KL    V++T+G +QA
Sbjct: 49  TDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108

Query: 102 FVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW----- 154
               +  L + G ++++  P +  +++  +F    V            L P+ DW     
Sbjct: 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY--------DLLPEKDWEIDLD 160

Query: 155 -LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG 211
            LE +L  + T  +V V+NP NP G+      L++I+++ +  G  ++ D  Y   ++  
Sbjct: 161 GLE-SLADEKTVAIV-VINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGD 218

Query: 212 RKHCCV-EGDH---VVNLFSFSKAYGMMGWRVGYIAY--PSEV--EGFATQLLKVQDNIP 263
                +        V++L   SK + + GWR+G+I    P  +  +     L  +   I 
Sbjct: 219 APFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRIL 278

Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAI 318
             A+I+   L      T  E+   ++  L  N E+  E L       + G      EGA+
Sbjct: 279 GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELK-----DIPGLVCPKPEGAM 333

Query: 319 YLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
           YL  +L  +      DD +    LA    V+ +PG A G    +RI+   + E   + A 
Sbjct: 334 YLMVKLELELFPEIKDDVDFCEKLAREESVICLPGSAFGLPNWVRITI-TVPESMLEEAC 392

Query: 375 DRLR 378
            R++
Sbjct: 393 SRIK 396

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 93/381 (24%), Positives = 165/381 (43%), Gaps = 59/381 (15%)

Query: 43  QP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVM 93
            P P   +EK+ E+   P    Y    G+P LR A+ +         ++ E     S  +
Sbjct: 41  GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPE-----SEAI 95

Query: 94  VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCSSKTLHPD 151
           VT G+ +   +++L   D GD+V++  P Y        + G  V  +         L   
Sbjct: 96  VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV--------PLVEG 147

Query: 152 ADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206
            D+   LE+ + E+ P PK++ +  P NP+   +     +++  L K     +V D  Y 
Sbjct: 148 VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA 207

Query: 207 -FMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260
             +YDG K      V G  D  V  F+ SK+Y M GWR+G++    E+     ++    D
Sbjct: 208 DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHD 267

Query: 261 N---IPICASIISQHLALYSLQTGPEWVTERVKDLVRN-REIIREALSPLGEGAVKGGEG 316
                P+      Q  A+ +L+ G +     + +  +  R+++ + L   G   V+  + 
Sbjct: 268 YGTFTPL------QVAAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKA 319

Query: 317 AIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
           ++Y+WA++PE    +   E  + L +   V V PG   G  G   + F  L+E+      
Sbjct: 320 SMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRF-ALIENR----- 373

Query: 375 DRLR---RGLEELV-KDGMVQ 391
           DR+R   RG++ +   DG++ 
Sbjct: 374 DRIRQAIRGIKAMFRADGLLP 394

Length = 395

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 90.0 bits (224), Expect = 7e-20
 Identities = 103/382 (26%), Positives = 156/382 (40%), Gaps = 58/382 (15%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY- 88
             A++L+QG   +  P   +E +   +     ++Y    G+  LR+A+  K  +   LY 
Sbjct: 30  HGAINLSQGFPDFDGPPYLVEALAYAM-AAGHNQYPPMTGVAALREAIAAKTAR---LYG 85

Query: 89  -----KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGP 142
                 S + VTAGA +A    +L L   GD V++F P Y +SY  + ++ G      G 
Sbjct: 86  RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSY-DSYAPAIELAG------GR 138

Query: 143 CSSKTLHPDA---DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
                L P     DW        P  +L+ +  P NPSGT      ++ +  L      +
Sbjct: 139 AVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIY 198

Query: 200 LVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
           ++ D  Y   ++DG  H  V       E   VV+  SF K Y + GW+VGY   P+ +  
Sbjct: 199 VLSDEVYEHIVFDGAGHASVLRHPELRERAFVVS--SFGKTYHVTGWKVGYCVAPAAL-- 254

Query: 251 FATQLLKVQDNIPICASIISQH-LALYSLQTGPEWVTE-----RVKDLVRNREIIREAL- 303
            + +  KV        +  +Q  LA Y L+  PE   E     + K     R+  R AL 
Sbjct: 255 -SAEFRKVHQYNTFTVNTPAQLALADY-LRAEPEHYLELPAFYQAK-----RDRFRAALA 307

Query: 304 -SPLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG-CRGH-- 357
            S      +   EG  +          LDD E  +WL   HGV  IP          H  
Sbjct: 308 NSRF---KLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRL 364

Query: 358 LRISFGGLVEDDCKAAADRLRR 379
           +R+ F    E+   AAA+RL +
Sbjct: 365 VRLCFAK-QEETLDAAAERLCQ 385

Length = 386

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 90.1 bits (224), Expect = 7e-20
 Identities = 96/406 (23%), Positives = 162/406 (39%), Gaps = 56/406 (13%)

Query: 6   KLAKRALETEMP-IMVQIQELVRGAK----NAVSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           KLA R +E   P +  +I +     K    + +SL  G      PK  +E + +   +P 
Sbjct: 1   KLADR-IENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPE 59

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGD 114
             +Y + EG+   R A+    +   + +      ++ V+   G+ +   +I L   + GD
Sbjct: 60  NHRYPSYEGMLAYRQAVA---DWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGD 116

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT-----PKLVS 169
            V++  P Y    +     G      G      L  +  +L    +  P       KL+ 
Sbjct: 117 IVLVPDPGYPVYRIGTLFAG------GEPYEMPLKEENGFLPD-FDAIPEDIAKKAKLMF 169

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-------------FMYDGRKHCC 216
           +  P NP+G   P +  K + +  K     +  DN Y                DG K   
Sbjct: 170 INYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVG 229

Query: 217 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALY 276
           +E        S SK Y M GWR+G     +++      L KV+ N+        Q+ A+ 
Sbjct: 230 IE------FHSLSKTYNMTGWRIGMAVGNADL---IAGLGKVKTNVDSGVFQAIQYAAIA 280

Query: 277 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 336
           +L    + V E  K   R R+++ EAL  +G   V+  +   Y+W  +PE +    E   
Sbjct: 281 ALNGPQDVVKEIRKIYQRRRDLLLEALKKIGI-DVEKPKATFYVWVPVPEGY-TSAEFAA 338

Query: 337 WLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRR 379
            L    GVVV PG   G  G  G++RIS   + ++  + A  R+++
Sbjct: 339 RLLEETGVVVTPGVGFGEYG-EGYIRISL-TVPDERLEEAVARIKK 382

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 89.6 bits (223), Expect = 1e-19
 Identities = 86/343 (25%), Positives = 132/343 (38%), Gaps = 46/343 (13%)

Query: 69  GLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
           GLPELR A+     +   L    ++ VMVT+GA +A    +L L + GD VV+F P Y +
Sbjct: 64  GLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLY-D 122

Query: 126 SYMSF-QMTGVTHILVGPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNPSGTY 180
           +Y+   +  G    LV       L P   W      L    +P  K V + NP NP+G  
Sbjct: 123 AYLPLIRRAGGVPRLV------RLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKV 175

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEG--DHVVNLFSFSKAYG 233
            P   L  +++ C+   +  + D  +   ++DGR+H     + G  +  V + S  K + 
Sbjct: 176 FPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS 235

Query: 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 293
           + GW+VG++     +      L K    +        Q    Y L    ++      DL 
Sbjct: 236 LTGWKVGFVCAAPPL---LRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLA 292

Query: 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGA 351
           R+R+ +   L  +G   V   +G  +L   L       DD    R L    GV  IP  A
Sbjct: 293 RSRDRLAAGLRRIGF-PVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSA 351

Query: 352 ----CGCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 384
                     +R  F        K       A +RL       
Sbjct: 352 FYEEDPVTSVVRFCF-------AKRDATLDEAVERLAAARRRR 387

Length = 387

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 88.2 bits (219), Expect = 3e-19
 Identities = 93/370 (25%), Positives = 152/370 (41%), Gaps = 57/370 (15%)

Query: 48  AMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106
           A    V EL    +   YG ++G P LR+A+ +  +   ++    + ++ GA      + 
Sbjct: 54  AFHNAVDELASPETFRGYGPEQGYPFLREAIAEN-DYRGRIDPEEIFISDGAKCDVFRL- 111

Query: 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG----------PCSSKT-LHPDADWL 155
            +L    ++V +  P Y     S  M G   +L            PC+++    P+    
Sbjct: 112 QSLFGPDNTVAVQDPVYPAYLDSNVMAGRAGVLDDDGRYSKITYLPCTAENNFIPE---- 167

Query: 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--------- 206
              L  +P   ++ + +P NP+GT + +  LK + D     GS ++ D  Y         
Sbjct: 168 ---LPEEPHIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSL 224

Query: 207 ----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-N 261
               F   G + C +E        SFSK  G  G R+G+   P E+  +A     +QD  
Sbjct: 225 PHSIFEIPGARFCAIE----FR--SFSKTAGFTGVRLGWTVVPKELT-YADGHSVIQDWE 277

Query: 262 IPIC-----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 315
              C     AS   Q  A       G + + E +   + N  I+R+AL   G   V GGE
Sbjct: 278 RRQCTKFNGASYPVQRAAEAGYAGEGLQPILEAISYYMENARILRKALEAAGF-KVYGGE 336

Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCK 371
            A YLW + PE  +  ++   +L + + VV  PG   G  G  G +R S FG    ++  
Sbjct: 337 HAPYLWVKTPEG-ISSWDFFDFLLYEYHVVGTPGSGFGPSG-EGFVRFSAFGK--RENII 392

Query: 372 AAADRLRRGL 381
            A +R++  L
Sbjct: 393 EACERIKEAL 402

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 87.2 bits (217), Expect = 4e-19
 Identities = 72/294 (24%), Positives = 107/294 (36%), Gaps = 46/294 (15%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           D    ELR A          L  +SV+   GA +A   +   L  A   V++ AP Y   
Sbjct: 46  DPEYDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRLL--APGRVLVLAPTYSEY 99

Query: 127 YMSFQMTG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184
             +++  G  V  +           PD D L   LE      L+ V NP NP+G  IP  
Sbjct: 100 ARAWRAAGHEVVEL-----------PDLDRLPAALEEA---DLLVVCNPNNPTGRLIPPE 145

Query: 185 LLKRISDLCKAAGSWLVVDNTYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVG 240
            L  ++   +A G WLVVD   F+                 +V L S +K +G+ G R+G
Sbjct: 146 TLLALAARLRARGGWLVVDEA-FIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLG 204

Query: 241 Y-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299
           + +A+P+ +      L       P   +  +      +L     W       L   R  +
Sbjct: 205 FVVAHPALIARLREALG------PWTVNGPALAAGRAALADT-AWQAATRARLAAERARL 257

Query: 300 REALSPLGEGAVKGG---------EGAIYLWARLPEKH--LDDFEVVRWLAHRH 342
              L+ LG   V GG           A  L   L  +   + DF+    L  R+
Sbjct: 258 AALLARLGGLRVVGGTALFLLVRTPDAAALHEALARRGILIRDFDNFPGLDPRY 311

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 88/363 (24%), Positives = 147/363 (40%), Gaps = 39/363 (10%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++AKR  + +  I  Q+  L      A++L QG   +  P    E   + + D   ++Y 
Sbjct: 31  QVAKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYA 88

Query: 66  ADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
              G+PEL  A+ ++  ++  L    +  V VT+G  +A    +L L + GD V++FAP+
Sbjct: 89  RGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 148

Query: 123 YFNSYMSFQMTGVTHILVGPCSSKTLH-PDADWLEKTLETKPTPKLVSVV--NPGNPSGT 179
           Y +   +  M G     V      TL  PD    E  L+   T K  +++   P NP+G 
Sbjct: 149 YDSYEATLSMAGAKIKTV------TLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGK 202

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHV------------VNLFS 227
                 L+ I+ LCK        D  Y           EGDH+            V + S
Sbjct: 203 MFTREELELIASLCKENDVLAFTDEVY------DKLAFEGDHISMASLPGMYERTVTMNS 256

Query: 228 FSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 286
             K + + GW++G+ IA P    G    + +    +    +   Q  A+ +L+    +  
Sbjct: 257 LGKTFSLTGWKIGWAIAPPHLTWG----VRQAHSFLTFATATPMQWAAVAALRAPESYYE 312

Query: 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA-RLPEKHLDDFEVVRWLAHRHGVV 345
           E  +D    ++I+ E L  +G   V    G  ++     P    +D     +L    GV 
Sbjct: 313 ELKRDYSAKKDILVEGLKEVG-FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVA 371

Query: 346 VIP 348
            IP
Sbjct: 372 AIP 374

Length = 413

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score = 83.1 bits (206), Expect = 1e-17
 Identities = 104/334 (31%), Positives = 139/334 (41%), Gaps = 56/334 (16%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           D G  ELR AL + L     +    V V  G+      +V      GD V+ FA   F +
Sbjct: 56  DMGAVELRAALAEHLG----VPPEHVAVGCGSVALCQQLVQATAGPGDEVI-FAWRSFEA 110

Query: 127 YMSF-QMTGVTHILVGPCSSKTLHPDADWL-----EKTLETKPTPKLVSVVNPGNPSGTY 180
           Y    Q+ G T + V P +    H D D +     ++T       +L+ V NP NP+GT 
Sbjct: 111 YPILVQVAGATPVQV-PLTPDHTH-DLDAMAAAITDRT-------RLIFVCNPNNPTGTV 161

Query: 181 IPERLLKRISDLCKAAGSWLVV-DNTYFMY-------DG----RKHCCVEGDHVVNLFSF 228
           +    L R  D        LVV D  Y  Y       DG    R H      +VV L +F
Sbjct: 162 VTPAELARFLD--AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDH-----PNVVVLRTF 214

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 288
           SKAYG+ G RVGY     EV      L KV   +P   + ++Q  A+ SL    E + ER
Sbjct: 215 SKAYGLAGLRVGYAVGHPEV---IAALRKVA--VPFSVNSLAQAAAIASLAAEDE-LLER 268

Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
           V  +V  R+ +R AL     G       A ++W  L E+  D        A   GVVV P
Sbjct: 269 VDAVVAERDRVRAAL--RAAGWTVPPSQANFVWLPLGERTADFAAA----AAEAGVVVRP 322

Query: 349 GGACGCRGHLRISFGGLVEDDC-KAAADRLRRGL 381
               G    +R++ G   E+D    AA   R GL
Sbjct: 323 FAGEG----VRVTIGAPEENDAFLRAARAWRAGL 352

Length = 352

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 82.4 bits (204), Expect = 3e-17
 Identities = 94/377 (24%), Positives = 146/377 (38%), Gaps = 69/377 (18%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVMVT 95
            P+  ++K+ E   DP   +Y A +G+P LR A           KLN +     + V+ T
Sbjct: 44  TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPD-----TQVVAT 98

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155
            G+ + F N+   +   GD ++   P Y      F M G      G   S    PD ++ 
Sbjct: 99  LGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAG------GVIRSVPAEPDEEFF 152

Query: 156 EKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208
              LE     + P P  + V  P NP+         K +    K     ++ D  Y    
Sbjct: 153 -PALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIY 211

Query: 209 YD-----------GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
           +D           G K   VE        S SK + M GWR+G+       E     L +
Sbjct: 212 FDGNPPPSVLQVPGAKDVTVE------FTSMSKTFSMAGWRMGFAV---GNERLIAALTR 262

Query: 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--- 314
           V+  +   A    Q  A  +L  GP+     +++L + R   R+ L    E   + G   
Sbjct: 263 VKSYLDYGAFTPIQVAATAAL-NGPQDCIAEMRELYKKR---RDVLV---ESFGRAGWDI 315

Query: 315 ---EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVE 367
                +++ WA +PE   HL   E  + L  +  V V PG   G  G  ++RI    LVE
Sbjct: 316 PPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRI---ALVE 372

Query: 368 DD--CKAAADRLRRGLE 382
           ++   + AA  ++R L 
Sbjct: 373 NEQRIRQAARNIKRFLS 389

Length = 405

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 81.8 bits (202), Expect = 5e-17
 Identities = 98/376 (26%), Positives = 153/376 (40%), Gaps = 49/376 (13%)

Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-- 88
           +A++L+QG   + P    +E V   + D   ++Y    G+  LR+AL +K     +LY  
Sbjct: 30  DALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTE---RLYGA 85

Query: 89  ----KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPC 143
                S V V A A++     +  L   GD V+ F P  F+SY    ++ G T     P 
Sbjct: 86  RYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPS-FDSYAPIVRLQGAT-----PV 139

Query: 144 SSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
           + K    D   +W E      P  +++ V  P NPS T      L R++ L +     ++
Sbjct: 140 AIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVIL 199

Query: 202 VDNTY--FMYDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254
            D  Y   ++DG +H  +       +  V + SF K+Y + GWRVGY   P+E+     +
Sbjct: 200 SDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAEL---MDE 256

Query: 255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL--SPLGEGAVK 312
           + KV   +   A    QH A       P           R R+++   L  S      + 
Sbjct: 257 IRKVHQFMVFSADTPMQH-AFAEALAEPASYLGLGAFYQRKRDLLARELAGSRF---ELL 312

Query: 313 GGEGAIYLWARLPEKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGH----LRISFGGL 365
             EG+ ++ AR   +H     D + V  L     V  IP  A    G     +R+SF   
Sbjct: 313 PSEGSFFMLARF--RHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS-- 368

Query: 366 VEDDC--KAAADRLRR 379
            +DD      A RL  
Sbjct: 369 -KDDATLVEGARRLCS 383

Length = 384

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 81.3 bits (201), Expect = 6e-17
 Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 52/373 (13%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALV----KKLNQENKLYKSSVMVTAGANQ 100
           P+  ++K+ E    P    Y   +G+ +LR A+     +K N +    ++ V+ T G+ +
Sbjct: 48  PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-ETEVVATMGSKE 106

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-LHPDADW----- 154
            +V++V  + + GD  ++  P Y     +F       IL G    K  L  + D+     
Sbjct: 107 GYVHLVQAITNPGDVAIVPDPAYPIHSQAF-------ILAGGNVHKMPLEYNEDFELDED 159

Query: 155 -----LEKTL-ETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY- 206
                LEK L E+ P PK V VVN P NP+   + +   +R+  L K    +++ D  Y 
Sbjct: 160 QFFENLEKALRESSPKPKYV-VVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA 218

Query: 207 -FMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 260
              +DG K      VEG  D  V  ++ SK+Y M GWRVG++    ++ G A + +K   
Sbjct: 219 DITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVG-ALKKIKSWL 277

Query: 261 NIPICASI-ISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGEGAI 318
           +  +   I ++  +AL     G +   E +++  R R +++ E+ +  G    K    ++
Sbjct: 278 DYGMFTPIQVAATIAL----DGDQSCVEEIRETYRKRRDVLIESFANAGWELQK-PRASM 332

Query: 319 YLWARLPEK--HLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD--CK 371
           ++WA++PE   HL   E  + L     V V PG   G  G   ++RI+   L+E++   +
Sbjct: 333 FVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYG-DEYVRIA---LIENENRIR 388

Query: 372 AAADRLRRGLEEL 384
            AA  +++ L+EL
Sbjct: 389 QAARNIKKFLKEL 401

Length = 403

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 79.5 bits (196), Expect = 2e-16
 Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 20/262 (7%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104
           P+  ++ ++E+V    ++ Y  D    +LR+ L +  +    +  +++ V  G+++    
Sbjct: 37  PEEVIKNIQEIVKSSQVNIY-PDPTAEKLREELARYCS----VVPTNIFVGNGSDEIIHL 91

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164
           I+L   + GD V+   P +    +  ++ G   I V     +    D     K +E K  
Sbjct: 92  IMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVK--LKEDYTYDVGSFIKVIE-KYQ 148

Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV--EGDHV 222
           PKLV + NP NP+G+ I    + +I  + K+ G  +VVD  YF + G     V  E +++
Sbjct: 149 PKLVFLCNPNNPTGSVIEREDIIKI--IEKSRGI-VVVDEAYFEFYGNTIVDVINEFENL 205

Query: 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 282
           + L + SKA+G+ G RVGY      +  +   L+K   NI    + +SQ +AL  L+TG 
Sbjct: 206 IVLRTLSKAFGLAGLRVGYAVANENILKY-LNLVKSPYNI----NSLSQVIALKVLRTGV 260

Query: 283 EWVTERVKDLVRNREIIREALS 304
             + ERV  ++  RE + + LS
Sbjct: 261 --LKERVNYILNERERLIKELS 280

Length = 351

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 79.2 bits (196), Expect = 3e-16
 Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 62/368 (16%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--------KLNQENKLYKSSVMVTA 96
           P   +E + + V DP   +Y + EG+ E R A+          +L+ E     + V+   
Sbjct: 46  PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPE-----TEVISLI 100

Query: 97  GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT-GVTHILVGPCSSKTLHPDADWL 155
           G+ +   +I L   + GD V++  P Y    +      G  + +  P     L  +  +L
Sbjct: 101 GSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM--P-----LKEENGFL 153

Query: 156 EKTLETKPT-----PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---- 206
              L+  P       KL+ +  P NP+G        + + D  K     +  D  Y    
Sbjct: 154 PD-LDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIA 212

Query: 207 --------FM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLL 256
                   F+   G K   +E        S SK Y M GWR+G+ +     + G    L 
Sbjct: 213 YDGYKPPSFLEVPGAKDVGIE------FHSLSKTYNMTGWRIGFAVGNADLIAG----LG 262

Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGE 315
           KV+ N+        Q   + +L  GP+ V E ++ + + R +I+ E L  LG   V+  +
Sbjct: 263 KVKSNVDSGVFQAIQEAGIAAL-NGPQEVVEELRKIYQERRDILVEGLRKLGL-EVEPPK 320

Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD-CK 371
              Y+WA +P+ +    E    L  + GVVV PG   G  G  G+ RI+    V D+  +
Sbjct: 321 ATFYVWAPVPKGY-TSAEFATLLLDKAGVVVTPGNGFGEYG-EGYFRIAL--TVPDERIE 376

Query: 372 AAADRLRR 379
            A +R+++
Sbjct: 377 EAVERIKK 384

Length = 385

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 73.7 bits (182), Expect = 2e-14
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 50/239 (20%)

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-------------FMYDGRKHCCVEG 219
           P NP+GT + +  LK   D  K  GS ++ D  Y             +  +G + C +E 
Sbjct: 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIE- 243

Query: 220 DHVVNLF-SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI--------C----- 265
                 F SFSK  G  G R  Y   P E++G  +      + + +              
Sbjct: 244 ------FRSFSKTAGFTGTRCAYTVVPKELKGKTSD----GEGVSLNSLWNRRQSTKFNG 293

Query: 266 ASIISQH--LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
            S I Q    A+YS + G   + E +   + N +IIRE L   G   V GG  A Y+W +
Sbjct: 294 VSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAKIIREGLESAGF-EVYGGVNAPYIWVK 351

Query: 324 LPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCKAAADRLR 378
            P+  +  ++    L     VV  PG   G  G  G+ R+S FG    ++   A +R++
Sbjct: 352 TPD-GMSSWDFFDKLLQEANVVGTPGSGFGPSG-EGYFRLSAFGSR--ENVLEAMERIK 406

Length = 409

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 69.8 bits (171), Expect = 6e-13
 Identities = 90/358 (25%), Positives = 148/358 (41%), Gaps = 65/358 (18%)

Query: 69  GLPELRDALVKKL--NQENKL-YKSSVMV-TAGANQAFVNIVLTLCDAGDSVVMFAPYY- 123
           GLP  ++AL + +   + NK+ +  + +V TAGA  A   ++  L + GD+ ++  PYY 
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYP 146

Query: 124 -FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSG 178
            F+  + ++ TGV  + +   SS         LE+  +         K V + NP NP G
Sbjct: 147 GFDRDLKWR-TGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLG 205

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDG----------RKHCCVEGD---- 220
           T      L  + D   A    L+ D  Y    F   G          RK      D    
Sbjct: 206 TTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRK--LENTDVSNR 263

Query: 221 -HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFATQ-----LLKVQDNIPICASIISQHL 273
            H+V  +S SK  G+ G+RVG I    E V   AT+     L+  Q          +Q+L
Sbjct: 264 VHIV--YSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQ----------TQYL 311

Query: 274 --ALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL- 329
             AL S +     ++ E  K L + ++ +   L   G   +K   G ++ W  +  +HL 
Sbjct: 312 LSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAG-LFCWVDM--RHLL 368

Query: 330 ------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 379
                  + E+ + + +   + + PG +C C   G  R+ F  + E+    A  RL+ 
Sbjct: 369 KSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKS 426

Length = 468

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 62/239 (25%), Positives = 91/239 (38%), Gaps = 32/239 (13%)

Query: 70  LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
             EL D L      +  L    VM  AG+++     VL        +V   P Y   + +
Sbjct: 76  DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRA 135

Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP----ERL 185
               G   +   P  +   H     ++  L   P   L+ + NP NP+GT  P    E L
Sbjct: 136 ADAQGA-PVAKVPLRADGAHD----VKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWL 190

Query: 186 LKRISDLCKAAGSWLVVDNTYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGY- 241
           L       K AGS L+VD  Y  +           +   ++ L +FSK YGM G R+G  
Sbjct: 191 LAN-----KPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLA 245

Query: 242 IAYP---SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
            A P   +++  F    L      P+ A+       L SL   P+ V +R  +    RE
Sbjct: 246 AARPDLLAKLARFGHNPL------PVPAA----AAGLASL-RDPKLVPQRRAENAAVRE 293

Length = 370

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 67.3 bits (165), Expect = 3e-12
 Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 29/315 (9%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-- 146
              ++   G        +  L   GD VV+  P Y   Y + ++ G   ++  P      
Sbjct: 83  PEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNG-RKVIENPLVEDDG 141

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               D D LEK        KL  + NP NP+G    +  L++I++LC   G  ++ D  +
Sbjct: 142 RYEIDFDALEKAFV-DERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIH 200

Query: 207 --FMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VEGFATQLL 256
              +  G KH           D+ + L S SK + + G +  YI   +      F  +L 
Sbjct: 201 ADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260

Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGE 315
           +   + P    II+   A Y    G  W+ E ++ L  NR+ + + L+    G  V   +
Sbjct: 261 RNGLHGPSALGIIA-TEAAY--NQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ 317

Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG---GLVEDD 369
           G    W    E  LDD E+  +L     V + PG   G  G  G +R++F     ++E+ 
Sbjct: 318 GTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEG-SGFVRLNFACPRAILEE- 375

Query: 370 CKAAADRLRRGLEEL 384
              A +RL+R L++ 
Sbjct: 376 ---ALERLKRALKKR 387

Length = 388

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 67.0 bits (164), Expect = 4e-12
 Identities = 87/357 (24%), Positives = 144/357 (40%), Gaps = 67/357 (18%)

Query: 66  ADEGLPELRDAL---------VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116
           AD G+ E ++A          VK ++   ++  S      G+  A   +     + GD  
Sbjct: 79  ADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS-----IGSKPALAMLPSCFINPGDVT 133

Query: 117 VMFAPYYFNSYMSFQMTGV-THILVGPCSSKTLH------PDADWLEKTLETKPTPKLVS 169
           +M  P Y        +TG  T    G   +  L       PD D + K  + K   KL+ 
Sbjct: 134 LMTVPGY-------PVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPK--DIKEKAKLLY 184

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFM--YDGR--KHCCVEG--DHVV 223
           +  P NP+G    +   + + D  K     +V D  Y    +DG+      V G  +  V
Sbjct: 185 LNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGV 244

Query: 224 NLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN------IPICASIISQHLALY 276
            + S SKAY M GWR+ ++      V+ FAT    V+DN      I I      Q   +Y
Sbjct: 245 EIHSLSKAYNMTGWRLAFVVGNELIVKAFAT----VKDNNDSGQFIAI------QKAGIY 294

Query: 277 SLQTGPEWVTERVKDLVRNR-EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--DF- 332
           +L   PE +TE++++    R + + + L+ +G  A   G G  YL+ + P+       F 
Sbjct: 295 ALDH-PE-ITEKIREKYSRRLDKLVKILNEVGFKAEMPG-GTFYLYVKAPKGTKSGIKFE 351

Query: 333 ---EVVRWLAHRHGVVVIPGGACGCRGHLRIS--FGGLVEDDCKAAADRLRRGLEEL 384
              E  ++L     +  +P    G    LR S  F    E++     + ++R L ++
Sbjct: 352 NAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406

Length = 410

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 49/232 (21%)

Query: 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCCVE- 218
           T + + V+NPGNP+G  + E   + I + CK  G  L+ D  Y    ++ D + H   + 
Sbjct: 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKV 330

Query: 219 ------GDHVVNLFSF---SKA-YGMMGWRVGYIAYPSEVEGFAT----QLLKVQDNIPI 264
                 G+  ++L SF   SK  YG  G R GY+    EV GF +    Q+ KV  ++ +
Sbjct: 331 ARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM----EVTGFTSDVREQIYKVA-SVNL 385

Query: 265 CASIISQHLALYSLQTGP---------EWVTER---VKDLVRNREIIREALSPLGEGAVK 312
           C++I  Q LA  SL   P          ++ E+   +  L R  + + +AL+ L      
Sbjct: 386 CSNISGQILA--SLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443

Query: 313 GGEGAIYLWAR--LPEKHLDDFEV---------VRWLAHRHGVVVIPGGACG 353
             EGA+YL+ R  LP+K +   E           + L +  G+VV+PG   G
Sbjct: 444 KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFG 495

Length = 534

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 66.7 bits (164), Expect = 4e-12
 Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 53/244 (21%)

Query: 22  IQELVR--GAKNAVSLAQ-----GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELR 74
           I+ELVR  G  + + LA      G     P   A+E ++       + +Y  D    EL+
Sbjct: 22  IEELVREYGIADIIKLASNENPLG-----PSPKAIEAIRAAA--DELHRY-PDGSGFELK 73

Query: 75  DALVKK--LNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQ 131
            AL +K  ++ E       +++  G+++    +       GD V+  + + F  Y ++ Q
Sbjct: 74  AALAEKFGVDPER------IILGNGSDEILELLARAYLGPGDEVIY-SEHGFAVYPIAAQ 126

Query: 132 MTGVTHILVGPCSSKTLHPDADW---LEKTLE-TKPTPKLVSVVNPGNPSGTYIP----E 183
             G   + V         P  D+   L+  L    P  +LV + NP NP+GTY+P    E
Sbjct: 127 AVGAKPVEV---------PAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVE 177

Query: 184 RLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCC------VEGDHVVNLFSFSKAYGMMGW 237
           R L  +          +V+D  Y  Y  RK          +  +VV   +FSKAYG+ G 
Sbjct: 178 RFLAGVPPDV-----LVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL 232

Query: 238 RVGY 241
           RVGY
Sbjct: 233 RVGY 236

Length = 367

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 66.8 bits (163), Expect = 5e-12
 Identities = 84/362 (23%), Positives = 141/362 (38%), Gaps = 36/362 (9%)

Query: 44  PPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLY---KSSVMVTAGAN 99
           P     E++           YG    G+ E  +A+ +  N  + +       V++  G+ 
Sbjct: 46  PADFVREEMVHTANQKE--SYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQ 103

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
              V++ +   + GD +++  P Y       QM G T   +         PD + + +  
Sbjct: 104 DGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPE-- 161

Query: 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC- 216
           E     K++ +  PGNP      E   K +    K     +V D  Y  F +DG K    
Sbjct: 162 EIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISF 221

Query: 217 --VEGDH--VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN---IPICASII 269
             V G     V + S SK+Y + G R+GY+    E+    TQ     D    +PI     
Sbjct: 222 LSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPI----- 276

Query: 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 329
            Q  A  +L+ G  +  +        R+ + +     G    K   G++++WA +P K  
Sbjct: 277 -QKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPA-GSMFVWAEIP-KGW 333

Query: 330 DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
                   L  R  VVV PG A G    G +RI+   LV+D+     + L++ +E +   
Sbjct: 334 TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA---LVQDE-----EVLQQAVENIRNS 385

Query: 388 GM 389
           G+
Sbjct: 386 GI 387

Length = 399

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 65.3 bits (160), Expect = 1e-11
 Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 39/273 (14%)

Query: 42  WQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-GAN 99
             P PK      KEL     I +Y  +   PELR+AL K       +   +++V   G +
Sbjct: 46  LGPSPKAVEAIEKEL---SKIHRY-PEPDAPELREALSKYTG----VPVENIIVGGDGMD 97

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP--DADW--- 154
           +    ++ T  D GD V++  P       +F       I      +K ++   + D+   
Sbjct: 98  EVIDTLMRTFIDPGDEVIIPTP-------TFSYYE---ISAKAHGAKPVYAKREEDFSLD 147

Query: 155 LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGR 212
           ++  L   T+ T K++ +  P NP+G  IPE  +++I +   A    + VD  Y  +   
Sbjct: 148 VDSVLNAITEKT-KVIFLCTPNNPTGNLIPEEDIRKILESTDAL---VFVDEAYVEFAEY 203

Query: 213 --KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIIS 270
                 +E D+++   +FSK +G+ G R+GY   P  +  +    ++ +   P   + +S
Sbjct: 204 DYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDY---YMRAKT--PFSLTRLS 258

Query: 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
           Q  A+ +L    E++ + ++  +++RE +   L
Sbjct: 259 QAAAIAALSD-KEYIEKSIEHGIKSREYLYNEL 290

Length = 361

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 74/339 (21%), Positives = 136/339 (40%), Gaps = 30/339 (8%)

Query: 47  MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVN 104
           +A + + E V     + Y    G+   R A+   L+ +   +L    V +T G   A   
Sbjct: 53  IAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEI 112

Query: 105 IVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
           I+  L     ++++  P +    +Y  F    + H  + P   K    D D +E  +  +
Sbjct: 113 IIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLP--EKGWEVDLDAVE-AIADE 169

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---------FMYDGRK 213
            T  +V ++NPGNP G+      L +I++  +  G  ++ D  Y         F+  G  
Sbjct: 170 NTIAMV-IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228

Query: 214 HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY--PS---EVEGFATQLLKVQDNIPICASI 268
              V    V+ L S SK + + GW +G++    PS   ++   A  + K  +  P   + 
Sbjct: 229 ASIVP---VITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTF 285

Query: 269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLP-- 325
           I   +     +T  ++ ++ +  L        + L  +      +  EGA +   +L   
Sbjct: 286 IQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLL 345

Query: 326 --EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF 362
             E   DD E    LA    ++++PG   G +  LRI+F
Sbjct: 346 LLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF 384

Length = 409

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 88/356 (24%), Positives = 146/356 (41%), Gaps = 55/356 (15%)

Query: 69  GLPELRDALVKKLNQ----ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY- 123
           GL   R A+   + Q    + +     +++TAGA  A   +   L D GD++++  PYY 
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYP 155

Query: 124 -FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VSVVNPGNPSG 178
            F+  + ++ TGV  + +   SS         LE   +      +    V + NP NP G
Sbjct: 156 GFDRDLRWR-TGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLG 214

Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTY---------FM----------YDGRKHCCVEG 219
             +   +L+ I D        LV D  Y         F+          Y G      E 
Sbjct: 215 ATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVA----ER 270

Query: 220 DHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278
            H+V  +S SK  G+ G+RVG I +Y  +V   A ++           S  +QHL L S+
Sbjct: 271 VHIV--YSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT-----LVSSQTQHL-LASM 322

Query: 279 QTGPEWVTERVKD----LVRNREIIREALSPLGEGAVKGGEGAIYLW---ARLPEKHLDD 331
            +  E+    ++     L +  E+I + L   G   +KG  G ++ W   + L E    +
Sbjct: 323 LSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAG-LFCWMNLSPLLETPTRE 381

Query: 332 FEVVRW--LAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEE 383
            E+  W  +     + + PG +C C   G  R+ F  + ED  + A  R+ R ++ 
Sbjct: 382 GELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437

Length = 447

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 64.1 bits (157), Expect = 3e-11
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 42/263 (15%)

Query: 150 PDADWLE--KTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
            +A W      + +K TP  K + ++NP NP+G    + LL+ I ++ +     +  D  
Sbjct: 150 EEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEI 209

Query: 206 Y--FMYDGRKHCCV---EGDHVVNLFS-FSKAYGMMGWRVGYIAY-------PSEVEGFA 252
           Y   +YDG  H  +     D +   F+  SKAY + G+RVG++            +EG  
Sbjct: 210 YDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEG-- 267

Query: 253 TQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKD---LVRNREIIREALSPL 306
              L +  ++ +CA++ +QH    ++QT   G + + E +     L   R+   E L+ +
Sbjct: 268 ---LDMLASMRLCANVPAQH----AIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI 320

Query: 307 -GEGAVKGGEGAIYLWARL-PEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRI 360
            G   VK  +GA+Y + +L P+ +   DD + V  L  +  V+++ G         H RI
Sbjct: 321 PGVSCVK-PKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRI 379

Query: 361 SFGGL-VEDDCKAAADRLRRGLE 382
               L   DD + A  R+ R L 
Sbjct: 380 VT--LPRVDDLEEAIGRIGRFLS 400

Length = 404

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 50/311 (16%)

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
           PE R  L   L +++ L   +++V  GA++    ++  + D GD ++   P +       
Sbjct: 86  PESR-RLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDA 144

Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
            + G   I V    +     D   + + +ET   PKL+ + +P NP G+ I +  L +I 
Sbjct: 145 AVNGAEVIKV--PRTPDFSLDVPRIVEAVET-HKPKLLFLTSPNNPDGSIISDDDLLKIL 201

Query: 191 DLCKAAGSWLVVDNTYFMYDG---RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
           +L       +V+D  Y  +     R     + D+++ L +FSK  G+ G RVGY A+P  
Sbjct: 202 EL----PILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257

Query: 248 VEGFATQLL---KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           +     + L   K   N+ + A +     A  +L   P+++ +    LV  RE +   L 
Sbjct: 258 I----IEYLWRAKQPYNVSVAAEV----AACAALSN-PKYLEDVKNALVEERERLFGLLK 308

Query: 305 ------PLGEGA------VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 352
                 P    A      V  G  A  L   L +                GV+V    + 
Sbjct: 309 EVPFLEPYPSDANFILCRVTSGRDAKKLKEDLAK---------------MGVMVRHYNSK 353

Query: 353 GCRGHLRISFG 363
             +G++R+S G
Sbjct: 354 ELKGYIRVSVG 364

Length = 380

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 63.8 bits (155), Expect = 5e-11
 Identities = 90/364 (24%), Positives = 152/364 (41%), Gaps = 38/364 (10%)

Query: 28  GAKNAVSLAQG--VVY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
             K  +SL  G    Y  +    +A E V + +     + Y    GLP+ R A+ + L++
Sbjct: 29  NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSR 88

Query: 84  E--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHIL 139
           +   KL    V +T+G  QA    +  L   G ++++  P +  +    +F+   V ++ 
Sbjct: 89  DLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVD 148

Query: 140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
           + P   K    D D +E  L  + T  LV ++NPGNP G     + LK+I++  +     
Sbjct: 149 LLP--EKGWEVDLDAVE-ALADQNTVALV-IINPGNPCGNVYSYQHLKKIAETAEKLKIL 204

Query: 200 LVVDNTY-FMYDGRKHCCVEGDH-----VVNLFSFSKAYGMMGWRVGY--IAYPSEV--- 248
           ++ D  Y  +  G       G       V+ L S SK + + GWR+G+     PS     
Sbjct: 205 VIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD 264

Query: 249 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI----IRE--- 301
                ++ K  D +   A+ I   +     QT   +  + +  L ++ +I    I+E   
Sbjct: 265 PKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPC 324

Query: 302 ---ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 358
                 P G  AV      + L   L E   DD +    LA    V+++PG A G +  L
Sbjct: 325 ITCPHKPEGSMAV-----MVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWL 379

Query: 359 RISF 362
           RI+F
Sbjct: 380 RITF 383

Length = 409

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 77/349 (22%), Positives = 140/349 (40%), Gaps = 26/349 (7%)

Query: 20  VQIQELVRGAK---NAVSLAQG-VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRD 75
             ++ L+RG       V  + G V   +P   A E     V    +  Y    G  ++R+
Sbjct: 26  AGLEALLRGEPLPGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRE 85

Query: 76  ALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-----Y 127
            L  +L             +++T G   A    V      GD V +  P YF +     +
Sbjct: 86  LLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEF 145

Query: 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
              +M  V    +       L  D D LE+    K   ++    NP NP+G       + 
Sbjct: 146 FEGEMVPVQLDYLSADKRAGL--DLDQLEEAF--KAGVRVFLFSNPNNPAGVVYSAEEIA 201

Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVG 240
           +I+ L +  G+ ++VD  Y   +YDG  +       ++ ++V+ +   SK   + G+R+G
Sbjct: 202 QIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLG 261

Query: 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300
            +A+ S       ++ K+Q  + + A+  SQ +          W+ +R+      R+ + 
Sbjct: 262 -VAFGSP--AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLL 318

Query: 301 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
             L  +    V+  +   YL+ RLP   +   + V+ L  + GV+V PG
Sbjct: 319 RVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPG 367

Length = 405

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 61.8 bits (151), Expect = 2e-10
 Identities = 64/352 (18%), Positives = 122/352 (34%), Gaps = 74/352 (21%)

Query: 41  YWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN--KLYKSSVMV 94
           Y++      + + +L+    +++    Y   +G  EL +AL   LN+     +   ++ +
Sbjct: 49  YFR------DLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL 102

Query: 95  TAGANQAFVNIVLTLC-DAGDSV---VMF--APYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           T G+  AF  +         D     ++F  AP Y          G     +      + 
Sbjct: 103 TNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEY---------IGYADAGLEEDLFVSY 153

Query: 149 HPDADWLE----------KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
            P+ + L           + L        + V  P NP+G  + +  L+++  L +    
Sbjct: 154 RPNIELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNI 213

Query: 199 WLVVDNTY--------------FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244
            L++DN Y                      C           S SK  G+ G R G +  
Sbjct: 214 PLLIDNAYGPPFPGIIFSEATPLWNPNIILC----------MSLSKL-GLPGVRCGIVIA 262

Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR-----E 297
             E+      L  +   I +    +   +A   +++G         ++   R +      
Sbjct: 263 DEEI---IEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIA 319

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
           ++R  L       +   EGAI+LW    +  +   E+ + L  R GV+V+PG
Sbjct: 320 LLRRYLPDE-PCLIHKPEGAIFLWLWFKDLPITTEELYQRLKAR-GVLVVPG 369

Length = 416

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 63/331 (19%), Positives = 124/331 (37%), Gaps = 16/331 (4%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENKLYKSSVMVTAGANQAF 102
                M+ +K+ +     + Y    G    R+A+     N +  +    V++ +G + A 
Sbjct: 49  TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108

Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
              +  L +AG ++++  P +       +  G+   L      K+   D   LE  ++ K
Sbjct: 109 EMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK 168

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD 220
                + V NP NP G+    + L+ I  + +     ++ D  Y   ++ G     V   
Sbjct: 169 --TAALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPVASL 226

Query: 221 H----VVNLFSFSKAYGMMGWRVGYIAYPSE---VEGFATQLLKVQDNIPICASIISQHL 273
                +++    +K + + GWR+G+I        +      L+K+   I    +I+   L
Sbjct: 227 SSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGAL 286

Query: 274 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL---- 329
               L+T  E+    +  L  N  +   AL+ +         GA+Y+   +  +H     
Sbjct: 287 PSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLQPVMPSGAMYMMVGIEMEHFPEFK 346

Query: 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 360
           +D E    L     V  +PG      G  R+
Sbjct: 347 NDVEFTERLIAEQSVFCLPGSCFEYPGFFRV 377

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 55/333 (16%)

Query: 69  GLPELRDALV---KKLNQENKLYKSSVMVTAGANQ--AFVNIVLTLCDAGDSVVMFAPYY 123
           G PELR+A+V   ++      L  ++V+   G  +  A++  +L L   GD+VV+    Y
Sbjct: 57  GTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-GPGDTVVIPELAY 115

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
               +   + G T +         L P              P L+ + +PGNP+G  +  
Sbjct: 116 PTYEVGALLAGATPVAAD--DPTELDPV------------GPDLIWLNSPGNPTGRVLSV 161

Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-----GDH--VVNLFSFSKAYGM 234
             L+ I    +  G+ +  D  Y    ++GR    ++     GDH  ++ + S SK   +
Sbjct: 162 DELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNL 221

Query: 235 MGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPEWVTER 288
            G+R G++A    +     +LL V+ +       P+ A++++   AL         V E+
Sbjct: 222 AGYRAGFVAGDPALVA---ELLTVRKHAGLMVPAPVQAAMVA---AL----GDDGHVAEQ 271

Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
                  R  ++ AL   G   +   E  +YLWA   E   D ++ V  LA   G++V P
Sbjct: 272 KARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATRGE---DAWDTVDRLAE-LGILVAP 326

Query: 349 G---GACGCRGHLRISFGGLVEDDCKAAADRLR 378
           G   G  G   H+R++     ++   AA  RL 
Sbjct: 327 GDFYGPAG-SQHVRVALTA-TDERIAAAVARLT 357

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 82/336 (24%), Positives = 138/336 (41%), Gaps = 58/336 (17%)

Query: 64  YGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           Y    GL   R A+ + L+++   +L    + +TAG  QA   I+  L   G ++++  P
Sbjct: 90  YSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRP 149

Query: 122 YY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LE--KTLETKPTPKLVSVVNPG 174
            Y  + +   F    V H          L P+  W   LE  + L  + T  +V ++NP 
Sbjct: 150 GYPLYEARAVFSGLEVRHF--------DLLPERGWEVDLEGVEALADENTVAMV-IINPN 200

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGD--HVVNLFSF 228
           NP G+      L +I++  +  G  ++ D  Y    +  +      V G+   V+ L S 
Sbjct: 201 NPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSI 260

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTE 287
           SK + + GWR+G+IA              +     +  SI +      ++ T P  +V  
Sbjct: 261 SKRWVVPGWRLGWIA--------TCDPNGILKETKVVDSIRNYL----NISTDPATFVQG 308

Query: 288 RVKDLVRN--REIIREALSPLGEGA---------VKG------GEGAIYLWARLPEKHL- 329
            +  ++ N   E   + L  L E A         +K        EG++++  +L    L 
Sbjct: 309 AIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS 368

Query: 330 ---DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF 362
              DD +    LA    VVV+PG A G +  LRI+F
Sbjct: 369 GIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF 404

Length = 430

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 46/310 (14%)

Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTG 134
            L+   +    +    ++ + GA++A   ++   C+ G DS+  F P Y    +S +   
Sbjct: 64  ELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFN 123

Query: 135 VTHILVGPCSSKTLHPDADWLEKT--LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
           V          K L   AD+      +E     KLV + NP NP+GT I    ++++ ++
Sbjct: 124 V--------GVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEM 175

Query: 193 CKAAGSWLVVDNTYFMYDGRKHCCVEG---------DHVVNLFSFSKAYGMMGWRVGY-I 242
              A   +VVD  Y  +      C E           ++V L + SKA+ + G R G+ +
Sbjct: 176 TPDA--IVVVDEAYIEF------CPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTL 227

Query: 243 AYPSEVEGFATQLLKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREII 299
           A    +E     L++V    P+    + I +Q L+    + G   +  +V DL      +
Sbjct: 228 ANEELIE----ILMRVIAPYPVPLPVSEIATQALS----EAGLARMKFQVLDLNAQGARL 279

Query: 300 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLR 359
           + ALS  G   V  G G  Y+ A+      DD + V       G+V            +R
Sbjct: 280 QAALSMYGGAKVLEGNGN-YVLAK-----FDDVDAVFKALWDAGIVARAYKDPRLANCIR 333

Query: 360 ISFGGLVEDD 369
            SF    E D
Sbjct: 334 FSFSNRAETD 343

Length = 354

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score = 60.2 bits (146), Expect = 5e-10
 Identities = 70/342 (20%), Positives = 136/342 (39%), Gaps = 29/342 (8%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDAL--------VKKLNQENKLYKSSVMVT 95
            P +  + + E V     + Y    G PE R+A+        V K + ++ + K +V++ 
Sbjct: 51  TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153
           +G + A +  +  LCD GD++++ AP +  + +        +      P   K    D D
Sbjct: 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRP--EKDWEADLD 168

Query: 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG 211
            + + ++ +   K + + NP NP G+    + ++ I  LC+     L+ D  Y   +++G
Sbjct: 169 EIRRLVDDR--TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226

Query: 212 RKHCCV-EGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP--IC 265
                V + D  V        +K   + GWR+G++    +  G     L     +   +C
Sbjct: 227 ATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL-VDPHGNGGDFLDGMKRLGMLVC 285

Query: 266 A--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
              S++   L    L T  E + + V  L     ++   +      +     G+++L +R
Sbjct: 286 GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSR 345

Query: 324 LPEKHLDDF----EVVRWLAHRHGVVVIPGGACGCRGHLRIS 361
           L  +   D     E    L     V V+PG      G  R++
Sbjct: 346 LDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLT 387

Length = 412

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 60.2 bits (146), Expect = 6e-10
 Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 33/299 (11%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
           V +  G + A   +   + D GD+V++  P +  +Y  + M+   H   G      +   
Sbjct: 85  VWLANGGDGALDYLARAMLDPGDTVLVPDPGF--AY--YGMSARYH--HGEVREYPVSKA 138

Query: 152 ADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFM 208
            D+    +  L+     ++V + +P NP+G+ IP   ++ +++      + +VVD  Y  
Sbjct: 139 DDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERT-DEETLVVVDEAYGE 197

Query: 209 YDGRKHCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265
           +  R        E D V  L +FSKAYG+ G R+GY   P   E +A    +V  N P  
Sbjct: 198 FAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARV--NTPFA 252

Query: 266 ASIISQHLALYSLQTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARL 324
           AS ++    L +L    +   ER  +  R  RE IRE L    +       G   L    
Sbjct: 253 ASELACRAGLAAL--DDDEHVERTVETARWAREYIREEL----DAPTWESAGNFVLAE-- 304

Query: 325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383
               + D   V   A   GV+V    + G    +RI+ G    ++ + A + L   L +
Sbjct: 305 ----VGDASAVAEAAQERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLAD 357

Length = 357

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 47/241 (19%)

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----- 215
             P L+ + +P NP+G  +    L+++    +  G+ +  D  Y    +D          
Sbjct: 147 QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206

Query: 216 -CVEGDH--VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------PICA 266
            C  GDH  ++ + S SK   + G+R G++A    +     +LL+V+ +       P+ A
Sbjct: 207 VC-GGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA---ELLEVRKHAGMMVPAPVQA 262

Query: 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA---VKGGEGAIYLWAR 323
           ++++   AL         V E+ ++    R   R  L P  E A   V   E  +YLWA 
Sbjct: 263 AMVA---ALGDD----AHVREQ-RERYARR---RAVLRPALEAAGFRVDHSEAGLYLWAT 311

Query: 324 LPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDDCK--AAADRLR 378
             E   D ++ V WLA R G++V PG   G  G + H+R++   L   D +  AA +RL 
Sbjct: 312 RGE---DCWDTVAWLAER-GILVAPGDFYGPAGAQ-HVRVA---LTATDERIAAAVERLA 363

Query: 379 R 379
            
Sbjct: 364 A 364

Length = 364

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 22/333 (6%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           P +S+Y +  G   LR+A+     +   +     + V+ +AG+ +A  +  L   D  + 
Sbjct: 27  PEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEED 86

Query: 116 ---VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
              V+   P Y          G     V            + +EK++  +   K+V +  
Sbjct: 87  RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEET--KIVWINY 144

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF-MYDGRK-HCCVEG--DHVVNLFSF 228
           P NP+G   P   LK    +C+  G  L  D  Y  +Y G   H  +E   ++V+   S 
Sbjct: 145 PHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSL 204

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER 288
           SK  GM G+R G++A   ++  F   L K++ N  + +    Q  A  +       V ER
Sbjct: 205 SKRSGMTGYRSGFVAGDEKLISF---LRKLRANFGVASPDFVQAAAKAAWSD-DNHVLER 260

Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
            K   R R++  E  + +G   +   +   YLW ++P         +R L   +G+VV P
Sbjct: 261 RKIFKRKRDLFIEFFNKVGLEYLY-PDATFYLWVKVPSGIDAKDYALRLL--ENGIVVAP 317

Query: 349 GGA--CGCRGHLRISFGGLVEDDCKAAADRLRR 379
           G     G  G++R++    +E +C+ A     R
Sbjct: 318 GENFGSGEEGYVRVALVPTLE-ECEEALRLWER 349

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 59.4 bits (143), Expect = 1e-09
 Identities = 81/368 (22%), Positives = 153/368 (41%), Gaps = 43/368 (11%)

Query: 62  SKYGADEGLPELRDALVKKLNQE--NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + YG   G+   R A+   +N++  +KL    + +TAG NQ    +  +L     ++++ 
Sbjct: 102 NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLP 161

Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LE--KTLETKPTPKLVSVVN 172
            P +  +++  ++    V            L P+ +W   LE  + +  + T  +V V+N
Sbjct: 162 RPGFPHYDARAAYSGLEVRKF--------DLLPEKEWEIDLEGIEAIADENTVAMV-VIN 212

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---------FMYDGRKHCCVEGDHVV 223
           P NP G       LK++++  +  G  ++ D  Y         F+  G+    V    V+
Sbjct: 213 PNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVP---VL 269

Query: 224 NLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLLKVQDNI---PICASIISQHLALYSL 278
            L   SK + + GW++G+IA   P  V      L  ++ N+   P  A+II   L     
Sbjct: 270 TLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILE 329

Query: 279 QTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL----DDFE 333
           +    +  ++ K L  N +++ + L  +      K  E   YL  +L    +    DD +
Sbjct: 330 KADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDID 389

Query: 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFG---GLVEDDCKAAADRLRRGLEELVKDGMV 390
               LA    +V +PG A G +  +RI+ G    ++ED  +       R  ++   +   
Sbjct: 390 FCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTETETNS 449

Query: 391 QEHVLLID 398
            + + L D
Sbjct: 450 LQALKLSD 457

Length = 462

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 47/324 (14%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E++K +      ++Y        LR+A+ +       L   ++ V  G+++  ++ ++ L
Sbjct: 42  EELKRV----PFNRY-PHITSDPLREAIAEFYG----LDAENIAVGNGSDE-LISYLVKL 91

Query: 110 CDAGDSVVMFAPYYFNSYMSF--QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167
            + G  +V+  P  F  Y SF  ++ G+  I V      T+  +        E       
Sbjct: 92  FE-GKHIVITPPT-FGMY-SFYAKLNGIPVIDVPLKEDFTIDGERI-----AEKAKNASA 143

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGR--KHCCVEGDHVVNL 225
           V + +P NP+G   PE  + ++ +     G  +V+D  Y  + G+       E  +++ L
Sbjct: 144 VFICSPNNPTGNLQPEEEILKVLE----TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILL 199

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWV 285
            +FSKA+G+ G R GY     E+      L +++   P   +I++  +   +L    + +
Sbjct: 200 RTFSKAFGLAGIRAGYAIANEEI---IDALYRIKP--PFSLNILTMKIVRLALDH-YDLI 253

Query: 286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345
            ER+  +++ RE +R     LGE A       + L     +  L++  VVR L+ R    
Sbjct: 254 EERIDYIIKERERVRRE---LGEYAYPSDANFLLLKLDAYDYLLENGIVVRKLSGR---- 306

Query: 346 VIPGGACGCRGHLRISFGGLVEDD 369
                     GH+R++ G   E+D
Sbjct: 307 --------LEGHIRVTVGKREEND 322

Length = 337

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 33/280 (11%)

Query: 104 NIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCSSKTLHPDADWLEK 157
           +++  +C A    GD VV   P +        M G  V  + V P     L  D D L  
Sbjct: 99  DLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP----DLGFDLDALCA 154

Query: 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY-------D 210
            +   P  +++   NP NP G+++    L R+ D      + +VVD  Y  Y        
Sbjct: 155 AVARAP--RMLMFSNPSNPVGSWLTADQLARVLDATPPE-TLIVVDEAYAEYAAGDDYPS 211

Query: 211 GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASII 269
                   G   + L +FSKAYG+ G RVGY +    E+ G      +V+   P   +  
Sbjct: 212 ALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLD---RVRT--PFNVNGA 266

Query: 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 329
           +Q  AL +L    E + + V   +  RE +++ L+ +G          ++  AR P   +
Sbjct: 267 AQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGYRIAPSRANFLFFDARRPASAV 325

Query: 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD 369
            +      L  R GV+V P    G    +R+S G   E+D
Sbjct: 326 AE----ALL--RQGVIVKPWKQPGFETFIRVSIGSPEEND 359

Length = 371

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 38/169 (22%), Positives = 56/169 (33%), Gaps = 13/169 (7%)

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
           EL + L + L   N       +       A    +L L   GD V++ A  + + Y    
Sbjct: 4   ELEEKLARLLQPGNDK----AVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA 59

Query: 132 -MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
            + G   + V P            + + L+ KP   L+ +       G  +P   LK I 
Sbjct: 60  ELAGAKPVPV-PVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIR 115

Query: 191 DLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236
            + K  G  L+VD                  G  VV  FS  K  G  G
Sbjct: 116 KIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT-FSLHKNLGGEG 163

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 28/225 (12%)

Query: 43  QP--PKMAMEKVKELVWDPSISKYGADEG----LPELRDALVKKLNQENKLYK---SSVM 93
           QP  P  + E++KE+  D S  K  ++E      P + D L K    ++ LY    ++ +
Sbjct: 11  QPYKPGKSPEQMKEVYGDHSFVKLASNENPFGCSPRVLDELQKSW-LDHALYPDGGATTL 69

Query: 94  VTAGANQAFVNIVLTLCDAG-DSVV-MFAPYYFNSYMSFQMTGVT------HILVGPCSS 145
               AN+  V +   LC +G D V+ + +     +  +    G T      H ++  C  
Sbjct: 70  RQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEV 129

Query: 146 KTLHPDA---DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
           K +  +    D  E +       K+V + NP NP+GTY+ +R L +  +   +  + +V+
Sbjct: 130 KEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGI-SENTLIVI 188

Query: 203 DNTYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGY 241
           D  Y+ Y   K          +  +++ L +FSKAYG+  +RVGY
Sbjct: 189 DEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGY 233

Length = 366

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 89/332 (26%), Positives = 135/332 (40%), Gaps = 65/332 (19%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSS---- 145
           V+++ GA  A   I+  L D GD  ++ +PYY  F+  + ++ TGV  I V PCSS    
Sbjct: 122 VVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWR-TGVEIIPV-PCSSSDNF 179

Query: 146 KTLHPDADW-LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204
           K     ADW  +K  E+    K + + NP NP GT + +  L  +          LVVD 
Sbjct: 180 KLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDE 239

Query: 205 TY--FMYDGRKHCCVEGDHVVN--------------LFSFSKAYGMMGWRVGYIAYPSEV 248
            Y   ++ G     V    VVN              ++S SK  G+ G+RVG I Y    
Sbjct: 240 IYAATVFAGGDFVSVA--EVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVG-IVY---- 292

Query: 249 EGFATQLLKVQDNIPICASIISQ--------HLALYSLQTGPEWVTERVKDLVRNREIIR 300
                      D++  CA  +S          L L S+ +  ++V   + +  R R  IR
Sbjct: 293 --------SFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSR-RLGIR 343

Query: 301 EALSPLG----EGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAH----RHGVVVIP 348
             +   G    + A       ++ W  L  +HL    + FE    L H    +  + V P
Sbjct: 344 HKVFTTGIKKADIACLTSNAGLFAWMDL--RHLLRDRNSFESEIELWHIIIDKVKLNVSP 401

Query: 349 GGACGCR--GHLRISFGGLVEDDCKAAADRLR 378
           G +  C   G  RI F  + +D    A  R++
Sbjct: 402 GSSFRCTEPGWFRICFANMDDDTLHVALGRIQ 433

Length = 496

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 53.6 bits (129), Expect = 6e-08
 Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 24/177 (13%)

Query: 78  VKKLNQE-NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT 136
            + L +E +KL+   +++TAG  +A   I +      D  V+   + +  Y       V 
Sbjct: 42  YEWLEEEFSKLFGEPIVITAGITEALYLIGILALR--DRKVIIPRHTYGEYER-----VA 94

Query: 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV---NPGNPSGTYIPERLLKRISDLC 193
                        P+   LE+ +E        SVV   NP NP G +   + LK + D  
Sbjct: 95  RFFAARIIKGPNDPEK--LEELVERN------SVVFFCNPNNPDGKFYNFKELKPLLDAV 146

Query: 194 KAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
           +   + L++D  +  F+         EG++++ L +F+K+YG+ G RVGY+    E 
Sbjct: 147 EDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGFEEA 200

Length = 311

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score = 53.5 bits (128), Expect = 7e-08
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 25/223 (11%)

Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    ++L      D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E          +V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAY 176

Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
           + + G  +  +  + +++  + +FSKA+ +   R+GY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVV---SSEKFIDAYNRVR--LPF 231

Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 232 NVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMG 273

Length = 335

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 30/257 (11%)

Query: 148 LHPDADWL----EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
           L P+ DWL        E     K++    P NP+    P    + I    +     LV D
Sbjct: 150 LKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHD 209

Query: 204 NTY--FMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-EGFATQL 255
             Y    +DG +   +       D  V   + SK Y M GWRVG++     + +G  T  
Sbjct: 210 LCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT-- 267

Query: 256 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN-REIIREALSPLGEGAVKGG 314
           LK   +  I +++  Q  A  +LQ  P+   ++V++  R  R+ + + L  LG   +   
Sbjct: 268 LKTNLDYGIFSAL--QKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGELG-WNIPPT 323

Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKA 372
           +  +YLW   P   +   +    +  + GVVV PG A G    G++RIS   L+ D    
Sbjct: 324 KATMYLWVPCP-VGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRIS---LIAD---- 375

Query: 373 AADRLRRGLEELVKDGM 389
             DRL   L+ L + G+
Sbjct: 376 -CDRLGEALDRLKQAGI 391

Length = 394

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 80/355 (22%), Positives = 140/355 (39%), Gaps = 35/355 (9%)

Query: 43  QP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY------KSSVMVT 95
           QP P+  +E ++E   +P+  KY    G P L++A      +E   Y      ++ V + 
Sbjct: 44  QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKRE---YGVTLDPETEVAIL 100

Query: 96  AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL 155
            G     V +   L + GD++++  P Y +      +       +   +     PD   +
Sbjct: 101 FGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKI 160

Query: 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK 213
            +  E     KL+ +  P NP+G    +   +      K     +V D  Y    +DG+K
Sbjct: 161 PE--EVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218

Query: 214 HCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI 268
                   G  D  + L++ SK + M GWRV +      V   A  LL  QD++ +  S+
Sbjct: 219 PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIE-AINLL--QDHLFV--SL 273

Query: 269 IS--QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326
               Q  A+ +L +    V E V      R     A   +G        G+ + W  +P+
Sbjct: 274 FGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPK-GSFFAWMPVPK 332

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLV--EDDCKAAADRL 377
            +    +    L  +  V V PG   G    G++R+   GL+  E+  + A +R+
Sbjct: 333 GY-TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRV---GLLTDEERLREAVERI 383

Length = 389

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 51.5 bits (124), Expect = 4e-07
 Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 49/232 (21%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP----Y 122
           D   PELR  + K L  +    +  ++  AG ++    I   L + G + VM  P    Y
Sbjct: 63  DGYAPELRTKVAKHLGVD----EEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQY 118

Query: 123 YFNS-YMSFQMTGVTHILVGPCSSKTLHPDA-----DWLEKTLETKPTPKLVSVVNPGNP 176
             N+     ++  V      P        +A     D  E+T       K+V + NP NP
Sbjct: 119 RHNAIIEGAEVREV------PLKDGGHDLEAMLKAID--EQT-------KIVWICNPNNP 163

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVV-DNTYFMYDGRK------HCCVEGDHVVNLFSFS 229
           +GTY+    L  +S L       LVV D  Y+ Y   +          + ++++ L +FS
Sbjct: 164 TGTYVNHEEL--LSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFS 221

Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---PICASIISQHLALYSL 278
           KAYG+   RVGY        G A++ L  + NI   P   + I+Q+ A+ +L
Sbjct: 222 KAYGLAALRVGY--------GIASEELIEKLNIARPPFNTTRIAQYAAIAAL 265

Length = 359

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 50.9 bits (122), Expect = 6e-07
 Identities = 82/354 (23%), Positives = 137/354 (38%), Gaps = 54/354 (15%)

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY-----KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           +S Y   +GLPELR A+ + L +   L      +  V+   G  +A       + + G +
Sbjct: 57  LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQA 116

Query: 116 --VVMFAPYYFNSYMSFQMTGVTHILVG------PC-SSKTLHPDADWLEKTLETKPTPK 166
             VVM  P+Y       Q+     +L G       C +     PD D + +++  +   +
Sbjct: 117 PLVVMPNPFY-------QIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRC--Q 167

Query: 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD------GRKHCCVE 218
           L+ V +PGNP+G  +    LK++ +L    G  +  D  Y    +D      G      +
Sbjct: 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQ 227

Query: 219 -GDH----VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
            G       +   S SK   + G R G++A  +E+     +          CA  I   L
Sbjct: 228 LGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHG----CAMPIPTQL 283

Query: 274 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 333
           A  +     + V E           + E L  + +  ++  +   YLW ++P    DD  
Sbjct: 284 ASIAAWNDEQHVRENRALYREKFAAVLEILGQVLD--LELPDAGFYLWPKVP---GDDEA 338

Query: 334 VVRWLAHRHGVVVIPG--------GACGCRGHLRISFGGLVEDDCKAAADRLRR 379
             R L     V V+PG        G     G +RI+    +E +C  AA+R+R 
Sbjct: 339 FARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLE-ECVEAAERIRS 391

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 76/271 (28%), Positives = 113/271 (41%), Gaps = 58/271 (21%)

Query: 61  ISKYGADEGLPELRDALVKKLN--QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
           I KYG  E   +LR AL        EN      +MV  G +     IV    + GD VV 
Sbjct: 61  IWKYGDPENH-DLRHALAAHHGVAPEN------IMVGEGIDGLLGLIVRLYVEPGDPVVT 113

Query: 119 FAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPG 174
               Y  FN    + + G    LV    +     D + L+  L+   +    LV + NP 
Sbjct: 114 SLGAYPTFN----YHVAGFGGRLV----TVPYRDDREDLDALLDAARRENAPLVYLANPD 165

Query: 175 NPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCC----------VEGDH-- 221
           NP G++ P   ++  I  L     + LV+D  Y         C          ++ D   
Sbjct: 166 NPMGSWHPAADIVAFIEAL--PETTLLVLDEAY---------CETAPAGAAPPIDTDDPN 214

Query: 222 VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL-- 278
           V+ + +FSKAYG+ G RVGY I  P  ++ F     KV+++  +  + I+Q  AL +L  
Sbjct: 215 VIRMRTFSKAYGLAGARVGYAIGAPGTIKAFD----KVRNHFGM--NRIAQAAALAALKD 268

Query: 279 QTGPEWVTERVKDLVRNR--EIIRE-ALSPL 306
           Q     V  ++    R+R   I R   L+PL
Sbjct: 269 QAYLAEVVGKI-AAARDRIAAIARANGLTPL 298

Length = 369

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 40/229 (17%)

Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHP 150
           V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  GV          +T+  
Sbjct: 77  VLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGV--------EIRTVPT 128

Query: 151 DADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTY 206
             +W   L    +     K+V V +P NP+G  I  + L+ +  L    G  +VV D  Y
Sbjct: 129 LDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTL--LELTRGKAIVVADEAY 186

Query: 207 FMYDGRKHCCVEGD---------HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
             +      C +           H+V L + SKA+ + G R G+     EV      LLK
Sbjct: 187 IEF------CPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINL---LLK 237

Query: 258 VQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
           V    P+    A I +Q L+   +      + ERV ++  NR+ +  AL
Sbjct: 238 VIAPYPLSTPVADIAAQALSPQGIAA----MRERVAEINANRQWLIAAL 282

Length = 351

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLE 156
           A   ++L L  AGD VV     Y  +Y  F+      G+    V P        D + LE
Sbjct: 67  AISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP-------DDPEALE 119

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  KP  KLV V +P NP+   +    ++ I++L    G+ LVVDNT+
Sbjct: 120 AAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTF 164

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 71/343 (20%), Positives = 128/343 (37%), Gaps = 52/343 (15%)

Query: 71  PELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM 128
             L  A++  L Q +  ++    ++   G   +    V  L   G+ V++  P Y     
Sbjct: 63  DSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPFLS 122

Query: 129 SFQMTGVTHILVGPCSSKTLHPDA-----DWLEKTLETKPTP--KLVSVVNPGNPSGTYI 181
           + +  G   +L        L  D      D   + LE   T   +L+ + +P NP G   
Sbjct: 123 AVKSNGRELVLN------PLKLDPGRYRFDL--EDLEDAITEKARLLLLCSPHNPVGRVW 174

Query: 182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE------GDHVVNLFSFSKAYG 233
               L R+++LC      +V D  +   +Y   KH  +        +  V L S  K + 
Sbjct: 175 TREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIPLASLSPEIAERTVTLLSPGKTFN 234

Query: 234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL-------QTGPEWVT 286
           + G  + +   P+          +    + I      QH  L+         + G  W+ 
Sbjct: 235 IAGLNISFAIIPN--PELRRAFQEAAQRVHI------QHGNLFGYVAFEAAYREGEPWLD 286

Query: 287 ERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345
             +  L  NR+++ E ++  L +  V+  E     W       LDD ++  +   + G+ 
Sbjct: 287 ALLAYLRGNRDLVEEFIAKRLPQIRVRPPEATYLAWLDCRALGLDDADLRAFFIEQAGLG 346

Query: 346 VIPG---GACGCRGHLRISFG---GLVEDDCKAAADRLRRGLE 382
           + PG   G  G  G +R++FG     +E     A +RLR+ L 
Sbjct: 347 LNPGISFGDGG-SGFMRLNFGCPRSTLEQ----ALERLRQALA 384

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 44/241 (18%)

Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           E + +LV  P            ELR    K++    +L   +V++  GA +   NIV   
Sbjct: 43  ENLDKLVEYPDPDYL-------ELR----KRIASFEQLDLENVILGNGATELIFNIVKVT 91

Query: 110 CDAGDSVVM---FAPY-----YFNSYMS-FQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
                 +++   FA Y      F++ +   ++T  T+             +   LE+  E
Sbjct: 92  -KPKKVLILAPTFAEYERALKAFDAEIEYAELTEETN----------FAANEIVLEEIKE 140

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV- 217
                 LV + NP NP+G  I +  +K+I D C+    +L++D  +  F+ +      + 
Sbjct: 141 EI---DLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMIN 197

Query: 218 EGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQH 272
             ++  NL    +F+K + + G R+GY    +  +  A +LL++++  +I   A +  Q 
Sbjct: 198 YLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMREPWSINTFADLAGQT 255

Query: 273 L 273
           L
Sbjct: 256 L 256

Length = 354

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 61/253 (24%), Positives = 97/253 (38%), Gaps = 39/253 (15%)

Query: 71  PELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY 127
           P LR AL         LY      +++  G+++A   +V  LC  G   V+  P  F  Y
Sbjct: 62  PGLRSALAA-------LYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMY 114

Query: 128 -MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP--- 182
            +  ++     + V         H D   +          KLV + +P NP+G+ I    
Sbjct: 115 AVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS-NAKLVFLCSPSNPAGSAIALDQ 173

Query: 183 -ERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWR 238
            ER L+ +        + +VVD  Y  +             D++  L + SKA+ +   R
Sbjct: 174 IERALQALQG-----KALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAAR 228

Query: 239 VG-YIAYPSEVEGFATQLLKVQDNIPI---CASIISQHLALYSLQTGPEWVT-ERVKDLV 293
           +G  IA    +      L + Q   P+   CA      LA  +L      VT  RV ++ 
Sbjct: 229 IGSLIANAELI----AVLRRCQAPYPVPTPCA-----ALAEQALSAPALAVTARRVAEVR 279

Query: 294 RNREIIREALSPL 306
             RE +  AL+ L
Sbjct: 280 AERERLHAALAQL 292

Length = 364

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 72/329 (21%), Positives = 122/329 (37%), Gaps = 66/329 (20%)

Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           +  Y   +G   L DAL K L +E            G N    NI LT    G     F 
Sbjct: 67  LCNYDGPQGKAVLIDALAKMLRRE-----------YGWNITAQNIALT---NGSQSAFF- 111

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTL-----------------------------HPD 151
            Y FN +   +  G    ++ P + + +                             H D
Sbjct: 112 -YLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVD 170

Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFM-YD 210
            + L     T      + V  P NP+G  + +  L ++  L +  G  L++DN Y + + 
Sbjct: 171 FEHLHIGESTG----AICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFP 226

Query: 211 GRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267
           G           ++++   S SK  G+ G R G I    +V      +  +   I +   
Sbjct: 227 GIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKV---IQAITNMNGIISLAPG 282

Query: 268 IISQHLALYSLQTGP-EWVTERV-KDLVRNR-----EIIREALSPLGEGAVKGGEGAIYL 320
            +   +A   +++G    ++E+V +   RNR      I+R  L       +   EGAI+L
Sbjct: 283 RMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHKPEGAIFL 341

Query: 321 WARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
           W    +  +   E+ + L  R GV+++PG
Sbjct: 342 WLWFKDLPITTEELYQRLKAR-GVLMVPG 369

Length = 417

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 8/103 (7%)

Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206
           +PD D LE  ++  P+   + ++NP NP+G   P+ +L+ I D+ +    +++ D  Y  
Sbjct: 156 YPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNN 215

Query: 207 FMYDGRKHCC---VEGDHV--VNLFSFSKAYGMMGWRVGYIAY 244
            +Y+G+K      V GD V  + L   SK     G R G+I  
Sbjct: 216 IVYNGKKTVPLSEVIGD-VPGIALKGISKELPWPGSRCGWIEV 257

Length = 433

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 44/259 (16%)

Query: 149 HPDADWLEKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
           +PD D     + +K T   K + ++NP NP+G   P  +L++I D+ +     +  D  Y
Sbjct: 268 YPDID----DIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY 323

Query: 207 --FMYDGRKH---CCVEGDHVVNLFS-FSKAYGMMGWRVGYIAYPSE-------VEGFAT 253
              + DG +H     +  D     FS  SK++ + G+R+G++            +EG   
Sbjct: 324 DRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEG--- 380

Query: 254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-------RNREIIREALSPL 306
             L +  N+ +C+++ +Q +    +QT      + VKD +         RE++  AL+ +
Sbjct: 381 --LNMLANMRLCSNVPAQSI----VQTA-LGGHQSVKDYLVPGGRVYEQRELVYNALNAI 433

Query: 307 -GEGAVKGGEGAIYLWARLPEKHL---DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRI 360
            G  AVK  + A Y++ ++  K     DD +    L H   V+++ G         H R+
Sbjct: 434 PGISAVK-PKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRV 492

Query: 361 SFGGLVEDDCKAAADRLRR 379
            +   +E D + A DRL  
Sbjct: 493 VYLPRLE-DLEDAMDRLAD 510

Length = 517

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 48.0 bits (115), Expect = 5e-06
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A    +L L  AGD V++    Y  +Y       Q  GV    V P        D + LE
Sbjct: 90  AISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-------GDDEALE 142

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  +P  KLV +  P NP         +  I+ L KA G+ +VVDNT+
Sbjct: 143 AAI-KEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTF 188

Length = 396

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score = 48.0 bits (115), Expect = 6e-06
 Identities = 93/360 (25%), Positives = 148/360 (41%), Gaps = 76/360 (21%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIV-LTLCDAGDSVVMFA 120
           Y    G P +R A+   + + + + K  S + +T GA+     ++ L + D  D V++  
Sbjct: 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI 170

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP 176
           P Y     +  + G   +       K    D + LE+  E       TP+ + V+NPGNP
Sbjct: 171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-------RKHCC---VEGDHVVN 224
           +G  +   +++ I   C   G  L+ D  Y   +YDG       RK       E +  V 
Sbjct: 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVE 290

Query: 225 LFSF---SKA-YGMMGWRVGY---IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYS 277
           L SF   SK   G  G R GY      P EV     Q+ K+  +I +C++++ Q      
Sbjct: 291 LVSFHSTSKGIIGECGRRGGYFELTNIPPEVR---EQIYKLA-SINLCSNVVGQ------ 340

Query: 278 LQTG-------------PEWVTER---VKDLVRNREIIREALSPLGEGAVKG-----GEG 316
           L TG             P +  ER      L R  E++ + L+      ++G      EG
Sbjct: 341 LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELN-----KIEGVSCQPVEG 395

Query: 317 AIYLWAR--LPEKHLDDFEV------VRW---LAHRHGVVVIPGGACGCRG---HLRISF 362
           A+Y + R  LPEK + + +       V +   L    G+VV+PG   G +    H RI+ 
Sbjct: 396 AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI 455

Length = 481

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHC-CVEGDHV--VNL 225
           VVNP NP+G    P RLL   + L  A G WLVVD   FM +  +H           + L
Sbjct: 130 VVNPNNPTGRRFDPARLLAWHARL-AARGGWLVVDEA-FMDNTPQHSLAACAHRPGLIVL 187

Query: 226 FSFSKAYGMMGWRVGYI-AYPSEVEGFATQL 255
            SF K +G+ G R+G++ A P+ +   A  L
Sbjct: 188 RSFGKFFGLAGARLGFVLAEPALLRALAELL 218

Length = 330

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 45/162 (27%)

Query: 109 LCDAGDSVVM----FAPY----YFNSYMSFQMTGVTHILVGPCSSKTLH----PDADWLE 156
           L   GD + +    F PY        Y  F+   V  I     +    H    PD + LE
Sbjct: 180 LLKKGDKIALMTPIFTPYLEIPELPRY-DFE---VVRIKADEMTEDGTHTWQYPDKE-LE 234

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY--FMYDGR 212
           K  +  P+ K + VVNP NP    + +  +++I D+       L++  D+ Y  F+    
Sbjct: 235 KLRD--PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFV---- 288

Query: 213 KHCCVEGDHVVNLF-----------SFSKAYGMMGWRVGYIA 243
                  D   +LF           SFSK +G  GWR+G IA
Sbjct: 289 -------DDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIA 323

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 56/233 (24%), Positives = 87/233 (37%), Gaps = 47/233 (20%)

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--------------FMYDGRKHCCVE 218
           P NP+    P    +     C+     LV D  Y                 D  K   +E
Sbjct: 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIE 233

Query: 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL----- 273
                  F+ SK+Y M G+R+G+    +++     Q+  V D         +Q+      
Sbjct: 234 ------FFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVD--------FNQYRGILNG 279

Query: 274 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDF 332
           A+ +L      V + V+   + R+    AL  +G   V   E  +Y+WA+LPE    +  
Sbjct: 280 AIAALTGPQATVQQTVQIFRQRRDAFINALHQIG-WPVPLPEATMYVWAKLPEPWQGNSV 338

Query: 333 EVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382
           E    L  + GV   PG   G  G  G++R +   LV D      D L   +E
Sbjct: 339 EFCTQLVAQTGVAASPGSGFGKSG-EGYVRFA---LVHD-----PDILEEAVE 382

Length = 388

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 18/173 (10%)

Query: 49  MEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVM----VTAGANQAFV 103
            + + +L   P  I  Y   +G+PELRD   +K+ +EN       M    VT       +
Sbjct: 26  QDLLNDL--TPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHG-L 82

Query: 104 NIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET- 161
           ++V  L  D GD+V++    + N  ++F       I+  P   +    D D L++ L+  
Sbjct: 83  SLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAA 142

Query: 162 KPTPKLVSVVN-PGNPSGTYIP-ERLLKRISDLCKA---AGSWLVV--DNTYF 207
               K++ ++N P NP+G Y P E+    I +  K    AG+ +V   D+ YF
Sbjct: 143 YNKGKVIVILNFPNNPTG-YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF 194

Length = 388

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEG- 219
           P +V + +P NP+GT +P   ++ I     AA   +VVD  Y  F   G       +   
Sbjct: 161 PDVVFLTSPNNPTGTALPLDDVEAI---LDAAPGIVVVDEAYAEFRRSGTPSALTLLPEY 217

Query: 220 DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278
             +V   + SKA+   G R+GY  A P+ V+  A +L++    +P   S ++Q  A  +L
Sbjct: 218 PRLVVSRTMSKAFAFAGGRLGYLAAAPAVVD--ALRLVR----LPYHLSAVTQAAARAAL 271

Query: 279 QTGPEWVTERVKDLVRNREIIREALSPLG 307
           +   E +   V  L   R+ +   L  LG
Sbjct: 272 RHADE-LLASVAALRAERDRVVAWLRELG 299

Length = 368

>gnl|CDD|235650 PRK05939, PRK05939, hypothetical protein; Provisional

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 17/109 (15%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYF---NS-YMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A   + LTL  AGD +V    + F   NS + + +  GV   +V          D   + 
Sbjct: 74  AIAAVFLTLLRAGDHLVSSQ-FLFGNTNSLFGTLRGLGVEVTMVDAT-------DVQNVA 125

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
             +  +P  ++V V    NP GT + +  L  I  LC+  G   VVDNT
Sbjct: 126 AAI--RPNTRMVFVETIANP-GTQVAD--LAGIGALCRERGLLYVVDNT 169

Length = 397

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 44.5 bits (106), Expect = 7e-05
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 29/109 (26%)

Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY- 206
           PD++ LEK  +  P+ K + +VNP NP    + +  L++I+D+       L++  D+ Y 
Sbjct: 230 PDSE-LEKLRD--PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286

Query: 207 -FMYDGRKHCCVEGDHVVNLF-----------SFSKAYGMMGWRVGYIA 243
            F+           D   +LF           SFSK +G  GWR+G IA
Sbjct: 287 TFV-----------DDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIA 324

Length = 527

>gnl|CDD|225428 COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 9e-05
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 95  TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHP 150
            A    A    +L L  AGD++V  +  Y  +Y  F  T    G+    V P        
Sbjct: 83  VASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-------D 135

Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
           D +  E  +      K V     GNP    + +  ++ I+++    G  L+VDNT
Sbjct: 136 DPENFEAAI--DENTKAVFAETIGNPGLD-VLD--IEAIAEIAHRHGVPLIVDNT 185

Length = 426

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 46/216 (21%)

Query: 105 IVLTLCDAGDSV-------VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157
           + L     G +V       VM+        MS ++ G+  + V   +  TL  D   +  
Sbjct: 97  LALACAKPGATVLAPEPGFVMYR-------MSAKLAGLEFVGVPLTADFTL--DLPAMLA 147

Query: 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-------FMYD 210
            +     P LV +  P NP+G    +  ++RI    +AA   +VVD  Y       ++  
Sbjct: 148 AIAEH-RPALVFLAYPNNPTGNLFDDADVERI---IEAAPGLVVVDEAYQPFAGDSWLPR 203

Query: 211 GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIIS 270
             +       +++ + + SK  G+ G R+GY+A          +L KV+   P   ++++
Sbjct: 204 LARF-----PNLLVMRTVSK-LGLAGLRLGYLAGHPAW---IAELDKVR--PPYNVNVLT 252

Query: 271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306
           Q  AL++L        E V  L      +R   + L
Sbjct: 253 QATALFAL--------EHVDVLDAQAAQLRAERTRL 280

Length = 356

>gnl|CDD|216267 pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLE 156
           A    +L L  AGD VV     Y  +Y          G+    V P        D D LE
Sbjct: 79  AIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVTFVDP-------SDLDALE 131

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
             +  KP  K V +  P NP    + +  ++ I+ + K  G+ +VVDNT+
Sbjct: 132 AAI--KPNTKAVFLETPTNPL-LKVVD--IEAIAKIAKKHGALVVVDNTF 176

This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor. Length = 382

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
           TG    ++       L  DA  LEK +   P  KLV++ +  N +GT  P   +K I++L
Sbjct: 135 TGAKVRVIPLDDDGLLDLDA--LEKLI--TPKTKLVALSHVSNVTGTVNP---VKEIAEL 187

Query: 193 CKAAGSWLVVD 203
               G+ ++VD
Sbjct: 188 AHEHGALVLVD 198

Length = 405

>gnl|CDD|181244 PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 20/120 (16%)

Query: 93  MVTAGANQAFVNIVLTLCDAGDSVV----MFAPY--YFNSYMSFQMTGVTHILVGPCSSK 146
           + TA    A + +V+ L  AGD VV    +F      F    +    G+    V      
Sbjct: 80  VATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFA--RFGIETTFVDLT--- 134

Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               DA W       +P  KL  +  P NP  T + +  +  ++++  AAG+ LVVDN +
Sbjct: 135 --DLDA-WRAAV---RPNTKLFFLETPSNPL-TELAD--IAALAEIAHAAGALLVVDNCF 185

Length = 390

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 39.8 bits (94), Expect = 0.002
 Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 23/132 (17%)

Query: 274 ALYSLQTGPEWVTERVKDLVRNRE-IIREALS---PLGEGAVKG-GEGAIYLWARLPEKH 328
           +L++L    +   + +KD++R R   + E L    P             +  WA   EK+
Sbjct: 393 SLFALLDEEDAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWA---EKN 449

Query: 329 LDDFEVVRW-------------LAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAA 374
               E   +             LA   GVV++PGG  G     +R+S   L E+D     
Sbjct: 450 YGK-EFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIG 508

Query: 375 DRLRRGLEELVK 386
             +R+ L+E  +
Sbjct: 509 KAIRKLLDEYYE 520

Length = 527

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	398
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK08068	389	transaminase; Reviewed	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK09148	405	aminotransferase; Validated	100.0
PLN02656	409	tyrosine transaminase	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PLN02187	462	rooty/superroot1	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PRK07324	373	transaminase; Validated	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK07777	387	aminotransferase; Validated	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PLN02231	534	alanine transaminase	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02368	407	alanine transaminase	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02397	423	aspartate transaminase	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
PLN02822	481	serine palmitoyltransferase	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	100.0
PRK02948	381	cysteine desulfurase; Provisional	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
PRK10534	333	L-threonine aldolase; Provisional	100.0
PLN02721	353	threonine aldolase	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	100.0
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	100.0
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	100.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	100.0
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.98
PRK13392	410	5-aminolevulinate synthase; Provisional	99.98
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.98
PLN02409	401	serine--glyoxylate aminotransaminase	99.98
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.98
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.98
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.97
PRK07179	407	hypothetical protein; Provisional	99.97
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.97
PLN02483	489	serine palmitoyltransferase	99.97
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.97
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.97
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.97
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.97
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PRK09064	407	5-aminolevulinate synthase; Validated	99.97
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.97
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.97
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.97
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.97
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.97
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.97
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.97
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.97
PRK13393	406	5-aminolevulinate synthase; Provisional	99.97
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.97
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.96
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.96
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.96
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.96
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.96
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.96
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.96
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.96
PRK04260	375	acetylornithine aminotransferase; Provisional	99.96
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.96
PRK07049	427	methionine gamma-lyase; Validated	99.96
PRK14012	404	cysteine desulfurase; Provisional	99.96
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.96
PLN02651	364	cysteine desulfurase	99.96
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.96
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.96
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.96
PLN00144	382	acetylornithine transaminase	99.96
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.96
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.96
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.96
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.96
PRK06234	400	methionine gamma-lyase; Provisional	99.96
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.96
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.95
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.95
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.95
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.95
PLN02624	474	ornithine-delta-aminotransferase	99.95
PLN02242	418	methionine gamma-lyase	99.95
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.95
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.95
PRK07505	402	hypothetical protein; Provisional	99.95
PRK06767	386	methionine gamma-lyase; Provisional	99.95
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.95
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.95
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.94
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.94
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.94
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.94
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.94
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.94
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.94
PRK08045	386	cystathionine gamma-synthase; Provisional	99.94
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.94
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.94
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.94
PRK08249	398	cystathionine gamma-synthase; Provisional	99.94
PRK08861	388	cystathionine gamma-synthase; Provisional	99.94
PRK06460	376	hypothetical protein; Provisional	99.94
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.94
PRK08776	405	cystathionine gamma-synthase; Provisional	99.94
PRK07503	403	methionine gamma-lyase; Provisional	99.94
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.94
PLN02955	476	8-amino-7-oxononanoate synthase	99.94
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.94
PRK09028	394	cystathionine beta-lyase; Provisional	99.94
PRK07582	366	cystathionine gamma-lyase; Validated	99.94
PRK07811	388	cystathionine gamma-synthase; Provisional	99.94
PRK08574	385	cystathionine gamma-synthase; Provisional	99.94
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.93
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.93
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.93
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.93
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.93
PRK07050	394	cystathionine beta-lyase; Provisional	99.93
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.93
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.93
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.93
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.93
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.93
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.93
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.93
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.93
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.93
PRK07482	461	hypothetical protein; Provisional	99.93
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.93
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.93
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.93
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.92
PRK05968	389	hypothetical protein; Provisional	99.92
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.92
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.92
PRK06541	460	hypothetical protein; Provisional	99.92
PRK05967	395	cystathionine beta-lyase; Provisional	99.92
PRK08064	390	cystathionine beta-lyase; Provisional	99.92
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.92
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.92
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.92
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.92
PRK07678	451	aminotransferase; Validated	99.92
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.92
PRK06062	451	hypothetical protein; Provisional	99.92
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.91
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.91
PLN02509	464	cystathionine beta-lyase	99.91
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.91
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.91
PRK05965	459	hypothetical protein; Provisional	99.91
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.91
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.91
PRK06105	460	aminotransferase; Provisional	99.91
PRK06917	447	hypothetical protein; Provisional	99.91
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.91
PRK07671	377	cystathionine beta-lyase; Provisional	99.91
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.91
PRK07483	443	hypothetical protein; Provisional	99.91
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.91
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.91
PLN02724	805	Molybdenum cofactor sulfurase	99.91
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.91
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.91
PRK02769	380	histidine decarboxylase; Provisional	99.91
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.9
PRK05939	397	hypothetical protein; Provisional	99.9
PRK07480	456	putative aminotransferase; Validated	99.9
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.9
PRK07481	449	hypothetical protein; Provisional	99.9
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.9
PRK03080	378	phosphoserine aminotransferase; Provisional	99.9
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.9
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.9
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.9
PRK07046	453	aminotransferase; Validated	99.9
PLN02271	586	serine hydroxymethyltransferase	99.9
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.9
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.9
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.9
PRK12403	460	putative aminotransferase; Provisional	99.9
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.9
PRK07036	466	hypothetical protein; Provisional	99.9
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.9
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.9
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.89
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.89
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.89
PRK08114	395	cystathionine beta-lyase; Provisional	99.89
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.89
PLN03032	374	serine decarboxylase; Provisional	99.89
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.89
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.89
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK06148	1013	hypothetical protein; Provisional	99.89
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.89
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.89
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.88
PLN02880	490	tyrosine decarboxylase	99.88
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.88
PLN02590	539	probable tyrosine decarboxylase	99.88
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.88
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PRK06149	972	hypothetical protein; Provisional	99.87
PRK08297	443	L-lysine aminotransferase; Provisional	99.87
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.86
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.86
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.86
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.86
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.86
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.86
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.85
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.85
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.85
PRK06434	384	cystathionine gamma-lyase; Validated	99.84
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.84
PLN02263	470	serine decarboxylase	99.84
PRK13237	460	tyrosine phenol-lyase; Provisional	99.84
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.83
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.83
PRK04311	464	selenocysteine synthase; Provisional	99.83
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.83
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.82
PRK05367	954	glycine dehydrogenase; Provisional	99.82
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.82
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.82
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.81
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.81
PRK12566	954	glycine dehydrogenase; Provisional	99.8
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.8
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.8
PRK15029	755	arginine decarboxylase; Provisional	99.8
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.8
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.8
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.79
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.79
PLN02452	365	phosphoserine transaminase	99.79
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.79
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.79
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.78
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.78
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.76
PRK12462	364	phosphoserine aminotransferase; Provisional	99.75
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.73
PRK13578	720	ornithine decarboxylase; Provisional	99.72
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.71
PRK15400	714	lysine decarboxylase CadA; Provisional	99.69
PRK05367	954	glycine dehydrogenase; Provisional	99.68
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.67
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.67
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.66
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.65
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.65
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.64
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.61
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.6
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.59
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.56
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.55
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.5
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.5
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.36
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.34
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.33
KOG0629	510	consensus Glutamate decarboxylase and related prot	99.27
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.23
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	99.21
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	99.16
PRK12566	954	glycine dehydrogenase; Provisional	99.1
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.09
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.04
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.98
COG4100	416	Cystathionine beta-lyase family protein involved i	98.84
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.82
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.73
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.71
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.04
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.7
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	97.66
PLN02672	1082	methionine S-methyltransferase	97.19
COG2102	223	Predicted ATPases of PP-loop superfamily [General	86.97
COG0159	265	TrpA Tryptophan synthase alpha chain [Amino acid t	86.77
KOG2741	351	consensus Dimeric dihydrodiol dehydrogenase [Carbo	86.27
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	83.45
TIGR00262	256	trpA tryptophan synthase, alpha subunit. Tryptopha	82.15

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.7e-56  Score=410.37  Aligned_cols=347  Identities=31%  Similarity=0.516  Sum_probs=311.5

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCc-EEEecChHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS-VMVTAGANQAFVNIV  106 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~-v~~~~g~t~a~~~~~  106 (398)
                      .++++|+.|.|+++.|+.+.+++.+++.+... .|.+..|.+++|+++++++++++++  ++++ |++|+|+++|+..++
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~  106 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAF  106 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHH
Confidence            47999999999999999999999999887533 6779999999999999999999874  4655 999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC--CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      .+++++||+|++++|.|+.|...+...|.+++.+ +.+.  ++|.+|++.|++.+++++  |+|++++||||||.+++++
T Consensus       107 ~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v-~l~~~~~~f~~d~~~l~~~i~~kt--k~i~ln~P~NPTGav~~~~  183 (393)
T COG0436         107 LALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEAAITPKT--KAIILNSPNNPTGAVYSKE  183 (393)
T ss_pred             HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEE-eCCcCccCCcCCHHHHHhhcCccc--eEEEEeCCCCCcCcCCCHH
Confidence            9999999999999999999999999999999999 7643  589999999999999865  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece--eccCCC-ccccc--c--CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~--~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      ++++|+++|++||+++|.||+|  +.|++. ..+..  .  .++++.+.|+||.++++|||+||+++++  +++++.+..
T Consensus       184 ~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~--~~l~~~~~~  261 (393)
T COG0436         184 ELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP--EELIAALRK  261 (393)
T ss_pred             HHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh--HHHHHHHHH
Confidence            9999999999999999999999  888873 33222  1  2578999999999999999999999986  678888888


Q ss_pred             hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCccEEEEeeCCCCCCChHHH
Q 015890          258 VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEV  334 (398)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (398)
                      +.....++++.+.|.++..+|+..+  .+.+.+++.++++++.+.+.|.+.+++.+.. |++++|+|++++.. .++.++
T Consensus       262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-~d~~~f  340 (393)
T COG0436         262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-LDSEEF  340 (393)
T ss_pred             HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-CCHHHH
Confidence            8888889999999999999999753  4778888899999999999999988767877 78999999999875 589999


Q ss_pred             HHHHHHhcCeEEecCCCCCCC---CeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          335 VRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       335 ~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+|+++.||.+.||+.|+.+   ++||+|++. +.++++++++++.+.++..
T Consensus       341 ~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         341 AKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY  392 (393)
T ss_pred             HHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999864   899999997 5699999999999988754

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2.2e-51  Score=386.66  Aligned_cols=368  Identities=23%  Similarity=0.407  Sum_probs=317.7

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      |++++|+.....+.++.+.+... +.+.++|+.|.|++++++.+.+++.+.+.+. ...|++..|.+++|+++++++++.
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~  107 (413)
T PLN00175         30 LQVAKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKD  107 (413)
T ss_pred             cchhHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHH
Confidence            35788888878888888777654 4789999999999988999999998887653 568999999999999999999987


Q ss_pred             cCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890           85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus        85 ~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      +++  +++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ +.+++++.+|++.|++.+..
T Consensus       108 ~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~l~~~~~~  186 (413)
T PLN00175        108 TGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTV-TLRPPDFAVPEDELKAAFTS  186 (413)
T ss_pred             hCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-ECCcccCCCCHHHHHHhcCc
Confidence            764  565 79999999999999999999999999999999999999999999999999 88765678899999999986


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--c--cCCcEEEEcccccccCCC
Q 015890          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--V--EGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~--~~~~~i~~~s~sK~~~~~  235 (398)
                      ++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++...+.  .  ..+++++++|+||.|+++
T Consensus       187 ~~--k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~  264 (413)
T PLN00175        187 KT--RAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT  264 (413)
T ss_pred             Cc--eEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence            54  99999999999999999999999999999999999999999  6554422111  1  146799999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  315 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  315 (398)
                      |+|+||++++   +++++.+........++.+.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+ ..+..|.
T Consensus       265 G~RiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~  340 (413)
T PLN00175        265 GWKIGWAIAP---PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSS  340 (413)
T ss_pred             chheeeeEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCC
Confidence            9999999999   78999888877666788999999999999987667888999999999999999999886 4777888


Q ss_pred             ccEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       316 ~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +++|+|++++. +..++.++++++++++||.+.||+.|+     ..++|||+++. +++++++++++|.+.++
T Consensus       341 g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        341 GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK  412 (413)
T ss_pred             eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence            89999999853 222567899988878899999999874     24699999996 88999999999998765

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=1.1e-50  Score=380.97  Aligned_cols=368  Identities=21%  Similarity=0.322  Sum_probs=301.2

Q ss_pred             hhHhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |.+++|+.......+..+.+    ....|.+.++|+.|.+++++++.+.+++.+.+.......|++..|..++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~   80 (388)
T PRK07366          1 MQFAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQW   80 (388)
T ss_pred             CchhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHH
Confidence            34566766544445544333    33468899999999999999999999999887654456798889999999999999


Q ss_pred             HhhhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890           81 LNQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (398)
Q Consensus        81 l~~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~  156 (398)
                      +.+.+|  ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ ++.+|+++++
T Consensus        81 ~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~  159 (388)
T PRK07366         81 YEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPM-PLRAENDFLPVFADIP  159 (388)
T ss_pred             HHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ECCCccCCCCCHHHHH
Confidence            988765  5677 69999999999999999999999999999999999999999999999999 87644 5778999998


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-c-ccc----cCCcEEEEccc
Q 015890          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-H-CCV----EGDHVVNLFSF  228 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~-~~~----~~~~~i~~~s~  228 (398)
                      +.+..+  ++++++++||||||.+++.+++++|+++|+++|+++|+||+|  +.+++.. . ...    ..+++++++|+
T Consensus       160 ~~~~~~--~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf  237 (388)
T PRK07366        160 TEVLAQ--ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL  237 (388)
T ss_pred             Hhhccc--ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeec
Confidence            877655  499999999999999999999999999999999999999999  6665432 1 111    12468999999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      ||.||+||+|+||++++   +++++.+.........+.++..+.++...+...++++++.++.++++++.+.+.|++++.
T Consensus       238 SK~~g~~GlRiG~~v~~---~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~  314 (388)
T PRK07366        238 SKSYNMGGFRIGFAIGN---AQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGW  314 (388)
T ss_pred             ccccCCcchhheehcCC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999998   889998887776555555444444455555433578889999999999999999988864


Q ss_pred             CccccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                       .+..|.+++|+|++++... .+..+++.++++++||.+.||+.|+.  ++++||+++. +.+++++++++|.++
T Consensus       315 -~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~  387 (388)
T PRK07366        315 -PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAF  387 (388)
T ss_pred             -cccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence             6666888999999998642 24677888887788999999998864  5799999996 789999999999875

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-50  Score=379.46  Aligned_cols=365  Identities=22%  Similarity=0.377  Sum_probs=308.9

Q ss_pred             hhHhHHhhccCchHHHHHHHHH----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |++++|......+.+.++.+..    ..+.++++|+.|.+++++++.+.+++.+.+.....+.|+ ..|..++|++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~   81 (399)
T PRK07681          3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY   81 (399)
T ss_pred             ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence            5677777665566666655543    246789999999999988999999998877654345564 57999999999999


Q ss_pred             HhhhcC--CCC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890           81 LNQENK--LYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (398)
Q Consensus        81 l~~~~~--~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~  156 (398)
                      +.+.++  +++ ++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ ++.+|++.++
T Consensus        82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~  160 (399)
T PRK07681         82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYM-PLKKENDFLPDLELIP  160 (399)
T ss_pred             HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence            988766  467 789999999999999999999999999999999999999999999999999 87754 5789999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-c----cCCcEEEEcccc
Q 015890          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-V----EGDHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~----~~~~~i~~~s~s  229 (398)
                      +.+.++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++..... .    ..+++++++|+|
T Consensus       161 ~~~~~~--~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  238 (399)
T PRK07681        161 EEIADK--AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLS  238 (399)
T ss_pred             Hhcccc--ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecc
Confidence            988755  499999999999999999999999999999999999999999  6555432211 1    235789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.||++|+|+||++++   +++++.+........++.+.+.|.++..+++.+..++++.++.++++++.+.+.|++.+. 
T Consensus       239 K~~~~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-  314 (399)
T PRK07681        239 KSYSLAGSRIGYMIGN---EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGW-  314 (399)
T ss_pred             cccCCccceeEEEecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence            9999999999999998   889998887776567788999999999999876678888888899999999999988864 


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      .+..+.+++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +.+++++++++|++
T Consensus       315 ~~~~p~~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~  384 (399)
T PRK07681        315 NVDKPAGSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN  384 (399)
T ss_pred             cccCCCeeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            776788899999999754 36778999898669999999998864  5799999995 78999999999987

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.2e-50  Score=375.23  Aligned_cols=374  Identities=34%  Similarity=0.670  Sum_probs=319.1

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      |++++|+.....+.+..+........+.++|+.|.+++++|+.+.+++.+.+.......|++..|..++|+.+++++.+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~   81 (389)
T PRK05957          2 TQFTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQD   81 (389)
T ss_pred             chhhHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            67889987766777776666666667899999999999899999999998876544567988899999999999999888


Q ss_pred             cCC--C-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890           85 NKL--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus        85 ~~~--~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      ++.  + +++|++++|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.+ .++.+|+|.+++.+++
T Consensus        82 ~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~  159 (389)
T PRK05957         82 NGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILV-PTD-DNYQLQPEAIEQAITP  159 (389)
T ss_pred             hCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEe-ecC-CCCCcCHHHHHHhcCc
Confidence            775  3 6789999999999999999999999999999999999988889999999998 775 3467899999999986


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c----cccCCcEEEEcccccccCC
Q 015890          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C----CVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~----~~~~~~~i~~~s~sK~~~~  234 (398)
                      ++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... .    ....+++++++|+||.+|+
T Consensus       160 ~~--klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~  237 (389)
T PRK05957        160 KT--RAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF  237 (389)
T ss_pred             Cc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccC
Confidence            54  99999999999999999999999999999999999999999  66554221 1    1234578999999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG  313 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~  313 (398)
                      +|+|+||++++   +++++++.........+.+.+.|.++..+|+.+..++++..+.++++++.+.+.|++++. ..+..
T Consensus       238 ~GlRiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~  314 (389)
T PRK05957        238 ASWRIGYMVIP---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP  314 (389)
T ss_pred             ccceeEEEecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence            99999999998   789999988776556677889999999999865677888888899999999999988765 36667


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.+++|+|++++.. .++.++++++++++||.+.||+.|+.  .+++||+++..+.+++++++++|.+.++++.+
T Consensus       315 ~~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~  388 (389)
T PRK05957        315 ANGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ  388 (389)
T ss_pred             CCeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence            88889999999753 46788999988779999999998854  46899999877889999999999999988654

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.3e-50  Score=373.64  Aligned_cols=365  Identities=22%  Similarity=0.360  Sum_probs=311.0

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +++++.......+++..+......++++|+.|.+++++++.+.+++.+..... ...|++..|..++|+++++++.+.++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~   84 (384)
T PRK06348          6 LAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYD   84 (384)
T ss_pred             HHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            68888777777888887776666789999999999988888888776655443 57798899999999999999987664


Q ss_pred             --CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCC
Q 015890           87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        87 --~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~  163 (398)
                        +++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+ ++++.+|++.+++.++++ 
T Consensus        85 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~-  162 (384)
T PRK06348         85 LSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIIL-ETYEEDGFQINVKKLEALITSK-  162 (384)
T ss_pred             CCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEe-cCCcCcCCcCCHHHHHHhhCcC-
Confidence              578999999999999999999999999999999999999999999999999988 754 457789999999998765 


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc--CCcEEEEcccccccCCCcc
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE--GDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~--~~~~i~~~s~sK~~~~~G~  237 (398)
                       +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++....  ...  .+++++++|+||.+|+||+
T Consensus       163 -~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl  241 (384)
T PRK06348        163 -TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW  241 (384)
T ss_pred             -ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc
Confidence             489999999999999999999999999999999999999999  555432111  122  5689999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+........++.+.+.|.++..++...+.+.++.++.++++++.+.+.|++.+...+..++++
T Consensus       242 RiG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg  318 (384)
T PRK06348        242 RIGYVIAP---DYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGS  318 (384)
T ss_pred             cceeeecC---HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCee
Confidence            99999999   788888887776667788999999999999865567788888889999999999988765677788889


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      +|+|++++....+..+++..+++++||.+.||+.|+.  +++||++++. +.+++++++++|++
T Consensus       319 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~  381 (384)
T PRK06348        319 IYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEK  381 (384)
T ss_pred             EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHh
Confidence            9999999743346788888887778999999998864  5799999985 88899999998865

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.1e-50  Score=376.03  Aligned_cols=349  Identities=22%  Similarity=0.340  Sum_probs=298.9

Q ss_pred             CCCeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCC-CcEEEecChHHHHHH
Q 015890           29 AKNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYK-SSVMVTAGANQAFVN  104 (398)
Q Consensus        29 g~~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~-~~v~~~~g~t~a~~~  104 (398)
                      ..+.++|+.|.++ .++|+.+.+++.+.+.......|++..|..++|+++++++++.+|  +++ ++|++|+|++++++.
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~  117 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL  117 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence            3678999999876 467888999988887654456798889999999999999999877  456 899999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC----CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+    ++++.+|++.|++.++.++  ++|++++|+||||.+
T Consensus       118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~~~~d~~~l~~~~~~~~--k~v~l~~P~NPTG~~  194 (405)
T PRK06207        118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYLSADKRAGLDLDQLEEAFKAGV--RVFLFSNPNNPAGVV  194 (405)
T ss_pred             HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eccccCcccCCCcCHHHHHHhhhhcC--eEEEECCCCCCCCcC
Confidence            999999999999999999999999999999999988 664    2357789999999997654  899999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      ++.+++++|+++|+++|+++|+||+|  +.+++.+..     ....+++++++|+||.|++||+|+||++++   +++++
T Consensus       195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~---~~l~~  271 (405)
T PRK06207        195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS---PAIID  271 (405)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC---HHHHH
Confidence            99999999999999999999999999  666553221     123578999999999999999999999998   78999


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      .+.........+.+.+.|.++..+++....++.+..+.++++++.+.+.|++++++.+..|++++|+|++++....+..+
T Consensus       272 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~  351 (405)
T PRK06207        272 RMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHD  351 (405)
T ss_pred             HHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHH
Confidence            88887766667778889999999998644677788888888899999999887556777788899999999753335778


Q ss_pred             HHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++..+++++||.+.||..|+.  ++++||+++. +.+++++++++|.++++++
T Consensus       352 ~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~  403 (405)
T PRK06207        352 FVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY  403 (405)
T ss_pred             HHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            888887678999999998853  6899999997 7899999999999998764

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-49  Score=373.78  Aligned_cols=374  Identities=25%  Similarity=0.367  Sum_probs=317.3

Q ss_pred             chhhHhHHhhccCchHHHH----HHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 015890            3 SYAKLAKRALETEMPIMVQ----IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV   78 (398)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~   78 (398)
                      |.|++++|+...+.+.+.+    .++..+++.++++|+.|.++.++++.+.+++.+.+.+. ...|++..|.+++|++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia   80 (402)
T PRK06107          2 STFVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAII   80 (402)
T ss_pred             CchhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHH
Confidence            3467888987655554433    34445677899999999999988999999999888653 467988899999999999


Q ss_pred             HHHhhhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890           79 KKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL  155 (398)
Q Consensus        79 ~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l  155 (398)
                      +++++.++.  ++++|++|+|+++|++.++.+++++||+|+++.|+|..|...+...+..++.+ +.+ ++++.+|++.+
T Consensus        81 ~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l  159 (402)
T PRK06107         81 AKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIV-ACPEEQGFKLTPEAL  159 (402)
T ss_pred             HHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEe-cCCcccCCCCCHHHH
Confidence            999887765  67899999999999999999999999999999999999998888888888888 665 45678899999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEeece--eccCCCcccc---c---cCCcEEEEc
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTY--FMYDGRKHCC---V---EGDHVVNLF  226 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-~~~livDe~~--~~~~~~~~~~---~---~~~~~i~~~  226 (398)
                      ++.++++  ++++++++|+||||.+++.+++++++++|+++ |+++|+||+|  +.|.+.....   .   ..+++++++
T Consensus       160 ~~~~~~~--~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~  237 (402)
T PRK06107        160 EAAITPR--TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTN  237 (402)
T ss_pred             HhhcCcC--ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEe
Confidence            9998765  48999999999999999999999999999998 9999999999  6565432211   1   135799999


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      |+||.|++||+|+||++++   +++++.+.........+++.+.|.++..+|+....++++..+.+.++++.+.+.|+++
T Consensus       238 S~SK~~~~pGlRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~  314 (402)
T PRK06107        238 GVSKTYAMTGWRIGYAAGP---ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI  314 (402)
T ss_pred             ccchhhcCcccceeeeecC---HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999   8899999888876678899999999999997656788888899999999999999887


Q ss_pred             CCCccccCCccEEEEeeCCC--------C--CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPE--------K--HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                      ++..+..|++++|+|++++.        .  ..+..+++.++++++||.++||..|+.++++|++++. +.+++++++++
T Consensus       315 ~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~  393 (402)
T PRK06107        315 PGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACAR  393 (402)
T ss_pred             CCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHH
Confidence            66678888899999998742        1  1245678888888899999999999888999999996 78999999999


Q ss_pred             HHHHHHHH
Q 015890          377 LRRGLEEL  384 (398)
Q Consensus       377 l~~~~~~~  384 (398)
                      |.+.++++
T Consensus       394 l~~~l~~~  401 (402)
T PRK06107        394 IERAVAAL  401 (402)
T ss_pred             HHHHHHhc
Confidence            99988764

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=2e-49  Score=372.07  Aligned_cols=366  Identities=26%  Similarity=0.394  Sum_probs=304.2

Q ss_pred             hhHhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |++++|+.......+....+.    ...+.+.++|+.|.+++++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~   81 (385)
T PRK09276          2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADW   81 (385)
T ss_pred             cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence            456777765555545443333    3467889999999999988999999999887654456798888999999999999


Q ss_pred             HhhhcCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHH
Q 015890           81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLE  156 (398)
Q Consensus        81 l~~~~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~  156 (398)
                      +++.+|.  +++ +|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.+ +.+ ++++.+|++.++
T Consensus        82 ~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~d~~~l~  160 (385)
T PRK09276         82 YKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM-PLKEENGFLPDLDAIP  160 (385)
T ss_pred             HHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence            9887664  565 59999999999999999999999999999999999999999999999999 776 447888999999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c--cCCcEEEEcccc
Q 015890          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V--EGDHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~--~~~~~i~~~s~s  229 (398)
                      +.+.+++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.....   .  ..+++++++|+|
T Consensus       161 ~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S  238 (385)
T PRK09276        161 EDVAKKA--KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLS  238 (385)
T ss_pred             Hhccccc--eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecch
Confidence            9887654  99999999999999999999999999999999999999999  6554422211   1  135679999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.||++|+|+||++++   +++++.+.........+.+.+.|.++..++.....++++.++.++++++.+.+.|++.+ +
T Consensus       239 K~~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~  314 (385)
T PRK09276        239 KTYNMTGWRIGFAVGN---ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-L  314 (385)
T ss_pred             hhcCCcchhheeeeCC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            9999999999999998   78888888776655566777889998999976567888888899999999999999875 4


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      .+..+.+++|+|++++.. .+..+++.++++++||.+.||..|+.  ++++||+++. +++++.+++++|.+
T Consensus       315 ~~~~~~~~~~~~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  384 (385)
T PRK09276        315 EVEPPKATFYVWAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK  384 (385)
T ss_pred             cccCCCcceEEEEECCCC-CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence            777788789999999764 36778888888778999999988764  5799999985 77888888888753

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=3.2e-49  Score=370.50  Aligned_cols=364  Identities=26%  Similarity=0.376  Sum_probs=302.6

Q ss_pred             HhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|......+.+..+.+.    .+.|++.++|+.|.+++++++.+.+++.+.+.......|++..|.+++|++++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~   81 (383)
T TIGR03540         2 LADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYK   81 (383)
T ss_pred             cchhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            3455554444444443333    346789999999999998899999999987765446789888899999999999998


Q ss_pred             hhcCC--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890           83 QENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT  158 (398)
Q Consensus        83 ~~~~~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~  158 (398)
                      +.++.  +++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+. +++.+|++++++.
T Consensus        82 ~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v-~~~~~~g~~~d~~~l~~~  160 (383)
T TIGR03540        82 RRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEM-PLKEENGFLPDFDAIPED  160 (383)
T ss_pred             HhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEE-ecCcccCCccCHHHHHhh
Confidence            87665  455 69999999999999999999999999999999999999999999999999 7764 4678899999998


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEcccccc
Q 015890          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFSFSKA  231 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s~sK~  231 (398)
                      +.++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.+....   ..  ..+++++++|+||.
T Consensus       161 ~~~~--~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~  238 (383)
T TIGR03540       161 IAKK--AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKT  238 (383)
T ss_pred             cccc--ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccc
Confidence            8765  499999999999999999999999999999999999999999  555442211   11  13567999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      ||++|+|+||++.+   +++++.+.........+.+.+.|.++..+++...+++++.++.+.++++.+.+.|++.+ +.+
T Consensus       239 ~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~  314 (383)
T TIGR03540       239 YNMTGWRIGMAVGN---ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDV  314 (383)
T ss_pred             cCCccceeeEEeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEe
Confidence            99999999999998   78888888776555567788899999999987668888888999999999999999886 477


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ..+.+++|+|++++.. .+..+++.++++++||.++||..|+.  ++++||+++. +++++.+++++|.+
T Consensus       315 ~~~~~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  382 (383)
T TIGR03540       315 EKPKATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK  382 (383)
T ss_pred             cCCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence            7788889999999754 36788898888789999999998863  5799999985 77888888887754

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-50  Score=355.25  Aligned_cols=363  Identities=33%  Similarity=0.539  Sum_probs=312.5

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEE-cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVS-LAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~   85 (398)
                      .++++.+...+.|-++.++..+ ....+ |+.|.+++++|+-+.+++.+.+.....++|....|.++++++|++.++.++
T Consensus         8 ~~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~   86 (420)
T KOG0257|consen    8 RNRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFY   86 (420)
T ss_pred             ccccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHh
Confidence            4667777667788888888776 44444 999999999999999999999998778999999999999999999999977


Q ss_pred             CC---CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-------CCCCCCChHHH
Q 015890           86 KL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-------SKTLHPDADWL  155 (398)
Q Consensus        86 ~~---~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~d~e~l  155 (398)
                      +.   +.++|++|.|+.+++..++..++++||+|++.+|.|+.|....+..|..++.+ +..       ...|.+|.+++
T Consensus        87 ~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v-~~~~~~g~~~s~~~~~D~~~l  165 (420)
T KOG0257|consen   87 GGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFV-PLKPKEGNVSSSDWTLDPEEL  165 (420)
T ss_pred             ccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceee-ccccccccccCccccCChHHH
Confidence            53   35679999999999999999999999999999999999999999999999988 654       45688999999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-----cccCCcEEEEccc
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVVNLFSF  228 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-----~~~~~~~i~~~s~  228 (398)
                      +.++.+++  |+|++++||||||.+++.++|++|+++|++||+++|.||+|  +.+++..+.     +..+++++.++|+
T Consensus       166 e~~~t~kT--k~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~  243 (420)
T KOG0257|consen  166 ESKITEKT--KAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSF  243 (420)
T ss_pred             HhhccCCc--cEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccc
Confidence            99999987  99999999999999999999999999999999999999999  778775322     2235789999999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--------hHHHHHHHHHHHHHHHHH
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIR  300 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~l~  300 (398)
                      +|+||+.|||+||++++   +.++..+........+..+++.|.|.+.++....        .+..++.+.+.++++.+.
T Consensus       244 gKtf~~TGWrlGW~igp---~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~  320 (420)
T KOG0257|consen  244 GKTFGVTGWRLGWAIGP---KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILA  320 (420)
T ss_pred             cceeeeeeeeeeeeech---HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999997   8999999999888889999999999988887533        344558899999999999


Q ss_pred             HHhccCCCCccccCCccEEEEeeCCC--------CC---CChHHHHHHHHHhcCeEEecCCCCCCCC-------eEEEEe
Q 015890          301 EALSPLGEGAVKGGEGAIYLWARLPE--------KH---LDDFEVVRWLAHRHGVVVIPGGACGCRG-------HLRISF  362 (398)
Q Consensus       301 ~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~-------~iRi~~  362 (398)
                      +.|++++. +++.|++++|+|++++.        ..   .++..++.+++++.|+.+.|++.|+..+       .+|+++
T Consensus       321 k~L~~lg~-~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~  399 (420)
T KOG0257|consen  321 KALEELGL-KVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF  399 (420)
T ss_pred             HHHHhcCC-ccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHH
Confidence            99999966 99999999999999971        11   1455678899999999999999998654       456666


Q ss_pred             cCCCHHHHHHHHHHHH
Q 015890          363 GGLVEDDCKAAADRLR  378 (398)
Q Consensus       363 ~~~~~~~~~~~~~~l~  378 (398)
                      +. +++.++.+.++|+
T Consensus       400 ~k-~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  400 CK-ADETLRKAIERLK  414 (420)
T ss_pred             Hh-hHHHHHHHHHHHh
Confidence            64 5666666666665

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=5.1e-49  Score=369.25  Aligned_cols=368  Identities=25%  Similarity=0.372  Sum_probs=308.2

Q ss_pred             HhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.....+.+.++.+.    ...++++++|+.|.+++++|+.+.+++.+.+.+. ...|++..|.+++|+.+++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~   83 (387)
T PRK08960          5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYA   83 (387)
T ss_pred             hhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHH
Confidence            5667666666666654443    3457899999999999988999999999888653 3568888999999999999998


Q ss_pred             hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhh
Q 015890           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l  159 (398)
                      +.++  +++++|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.+ +.+.+ ++.+|++.+++.+
T Consensus        84 ~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~  162 (387)
T PRK08960         84 QRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLV-PVGPDSRYQLTPALVERHW  162 (387)
T ss_pred             HHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEE-ecCcccCCCCCHHHHHHHh
Confidence            7765  578999999999999999999999999999999999999999999999999988 77654 5778999999998


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      ++++  +++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.... ....+++++++|+||.+|++|
T Consensus       163 ~~~~--~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G  240 (387)
T PRK08960        163 NADT--VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTG  240 (387)
T ss_pred             Cccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcc
Confidence            8765  88899999999999999999999999999999999999999  555432222 222468899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  315 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  315 (398)
                      +|+||++++   +++++.+.........+.+.+.|.++..++.. ...++.+.++.++++++.+.+.|++++...+..|.
T Consensus       241 lRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~  317 (387)
T PRK08960        241 WRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ  317 (387)
T ss_pred             cEEEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence            999999999   78888888777666677889999998888864 24678888889999999999999887652234577


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +++|+|+++++...+..+++.++++++||.+.||+.|+.   ++++|++++. +.+.+.+++++|.++++
T Consensus       318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR  386 (387)
T ss_pred             eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            899999999763346778888888789999999998864   4699999996 77889999988887664

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=9.1e-49  Score=367.10  Aligned_cols=369  Identities=25%  Similarity=0.401  Sum_probs=314.1

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      ++.|..+...+.+++...+..+.++.++|+.|.+.+++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g   83 (387)
T PRK07683          5 INPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYD   83 (387)
T ss_pred             hhHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            35677777778888888887777889999999988888889999999987653 46798889999999999999987765


Q ss_pred             C--CCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890           87 L--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        87 ~--~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      +  +++ +|++|+|+++|+..++.+++++||+|+++.|+|..+...++..|++++.+ +.+++++.+|.+.+++.+++++
T Consensus        84 ~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~  162 (387)
T PRK07683         84 LHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFI-DTRSTGFRLTAEALENAITEKT  162 (387)
T ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEe-ecCcccCCCCHHHHHHhcCcCc
Confidence            4  677 89999999999999999999999999999999999999999999999999 8887788889999999987654


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcc
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~  237 (398)
                        +++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.+......    ..+++++++|+||.+|+||+
T Consensus       163 --~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl  240 (387)
T PRK07683        163 --RCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW  240 (387)
T ss_pred             --eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc
Confidence              99999999999999999999999999999999999999999  55544322211    24579999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+.........+++.+.|.++..+|..+..+.++.++.++++++.+.+.|++.+ ..+..+.++
T Consensus       241 RiG~i~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~  316 (387)
T PRK07683        241 RIGFLFAP---SYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGA  316 (387)
T ss_pred             eeEEEEcC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCee
Confidence            99999999   78888887665444456678899999999987667778888889999999999998875 467778888


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +|+|+.++....+..+++.++++++||.+.||+.|+.  ++++||+++. +++++.+++++|.+.+++-
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~~  384 (387)
T PRK07683        317 FYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQK  384 (387)
T ss_pred             EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            9999988753345677887777889999999998854  5799999997 7899999999999988654

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=6.2e-49  Score=368.90  Aligned_cols=364  Identities=21%  Similarity=0.339  Sum_probs=301.1

Q ss_pred             HhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++++.....+.+..+.+    ....+++.++|+.|.++.++++.+.+++.+.+.......|++..|..++|+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~   84 (389)
T PRK08068          5 PSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYK   84 (389)
T ss_pred             hhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            455554444334443322    3445678999999998888788899999888765546689888999999999999998


Q ss_pred             hhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890           83 QENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT  158 (398)
Q Consensus        83 ~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~  158 (398)
                      +.+|  ++++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++++++.
T Consensus        85 ~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~  163 (389)
T PRK08068         85 REYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETM-PLIAENNFLPDYTKIPEE  163 (389)
T ss_pred             HHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEe-ecccccCCCCCHHHHHHh
Confidence            7766  5677 79999999999999999999999999999999999999999999999999 8864 4788899999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-cccc----cCCcEEEEcccccc
Q 015890          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCV----EGDHVVNLFSFSKA  231 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~----~~~~~i~~~s~sK~  231 (398)
                      ++++  +++|++++||||||.+++.+++++|+++|+++++++|+||+|  +.+++.. .+..    ..+++++++|+||.
T Consensus       164 ~~~~--~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~  241 (389)
T PRK08068        164 VAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKT  241 (389)
T ss_pred             cccc--ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhc
Confidence            8765  499999999999999999999999999999999999999999  6665421 1111    23578999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      ||++|+|+||++++   +++++.+.........+.+.+.|.++..++.....++++.++.+.++++.+.+.|++.+. .+
T Consensus       242 ~g~~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~  317 (389)
T PRK08068        242 FNMAGWRVAFAVGN---ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW-EV  317 (389)
T ss_pred             cCCccceeEeEecC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-cc
Confidence            99999999999998   889998887776555566667788888888655577888899999999999999988864 67


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ..+.+++|+|++++.. .+..++..++++++||.++||..|+.  ++++||+++. +++.+.+++++|.+
T Consensus       318 ~~~~g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~  385 (389)
T PRK08068        318 DAPKGSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGK  385 (389)
T ss_pred             cCCCeeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHH
Confidence            7788889999999754 36788989887668999999998764  5799999986 67788888888765

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=5.4e-49  Score=370.18  Aligned_cols=359  Identities=22%  Similarity=0.321  Sum_probs=300.6

Q ss_pred             HHhhccCchHHHHHHHHHH-----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            9 KRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~-----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      +|+.....+.++.++++.+     .|.+.++|+.|.+++++++.+.+++.+.+..  ...|++..|..++|+++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~   80 (396)
T PRK09147          3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER   80 (396)
T ss_pred             chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence            3444555566666666653     4689999999999999899999999887653  67898889999999999999988


Q ss_pred             hcC---CCCC-cEEEecChHHHHHHHHHHhccC---CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHH
Q 015890           84 ENK---LYKS-SVMVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWL  155 (398)
Q Consensus        84 ~~~---~~~~-~v~~~~g~t~a~~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l  155 (398)
                      .+|   ++++ +|++|+|+++++..++++++++   ||.|+++.|+|+.+...++..|++++.+ |.++ +++.+|++.+
T Consensus        81 ~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-p~~~~~~~~~d~~~l  159 (396)
T PRK09147         81 RYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFL-NCDPANNFAPDFDAV  159 (396)
T ss_pred             HhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEe-ccCccccCccCHHHH
Confidence            876   5564 8999999999999999999999   8999999999999999999999999999 8764 4678999999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--cccc---------ccCCcE
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--KHCC---------VEGDHV  222 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~~~~---------~~~~~~  222 (398)
                      ++.+.++  ++++++++|+||||.+++.+++++|+++|++|++++|+||+|  +.+++.  ....         ...+++
T Consensus       160 ~~~~~~~--~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  237 (396)
T PRK09147        160 PAEVWAR--TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRL  237 (396)
T ss_pred             HHHHhhc--cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccE
Confidence            9888654  499999999999999999999999999999999999999999  555442  1110         124689


Q ss_pred             EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      ++++|+||.++++|+|+||++++   +++++.+........++.+.+.|.++..++.. .+++.+.++.++++++.+.+.
T Consensus       238 i~~~S~SK~~~~~GlRiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  313 (396)
T PRK09147        238 VVFHSLSKRSNVPGLRSGFVAGD---AALLKKFLLYRTYHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPI  313 (396)
T ss_pred             EEEeccccccCCccceeeeecCC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999   78888887766555667888888887777764 567888889999999999999


Q ss_pred             hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecCCCHHHHHHHH
Q 015890          303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA  374 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~  374 (398)
                      |++.  ..+..|.+++|+|++++   .+..+++.++++++||.+.||..|+.        .+++||+++. +++++++++
T Consensus       314 L~~~--~~~~~p~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l  387 (396)
T PRK09147        314 LAPV--LDVQLPDAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAA  387 (396)
T ss_pred             HHHh--cCCCCCCeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHH
Confidence            8874  35667888999999997   24678888888788999999987741        4789999997 688999999


Q ss_pred             HHHHHHHH
Q 015890          375 DRLRRGLE  382 (398)
Q Consensus       375 ~~l~~~~~  382 (398)
                      ++|.++++
T Consensus       388 ~rl~~~~~  395 (396)
T PRK09147        388 ERIVDFCR  395 (396)
T ss_pred             HHHHHHhc
Confidence            99988763

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=2.1e-48  Score=365.14  Aligned_cols=371  Identities=25%  Similarity=0.418  Sum_probs=312.0

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +++|+.......++++.++..+.+++++|+.|.+++.+++.+.+++.+.+... ...|++..|.+++|+++++++.+.++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~   85 (391)
T PRK07309          7 FNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYN   85 (391)
T ss_pred             HHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            46777777777888888877666889999999999988999999988877543 35688888999999999999988776


Q ss_pred             C--C-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-
Q 015890           87 L--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-  162 (398)
Q Consensus        87 ~--~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-  162 (398)
                      +  + +++|++|+|++++++.++.+++++||+|++++|+|.++...++..|.+++.+ +.+++++.+|++.+++.++.. 
T Consensus        86 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~  164 (391)
T PRK07309         86 LDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEI-DTTENDFVLTPEMLEKAILEQG  164 (391)
T ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEE-ecCCcCCcCCHHHHHHHhhccC
Confidence            5  3 4689999999999999999999999999999999999999999999999999 877667788999999998742 


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--ccCCcEEEEcccccccCCCcc
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VEGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~~~~~i~~~s~sK~~~~~G~  237 (398)
                      ..++++++++|+||||.+++.+++++|+++|++||+++|+|++|  +.+++... ..  ...+++++++|+||.||++|+
T Consensus       165 ~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  244 (391)
T PRK07309        165 DKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW  244 (391)
T ss_pred             CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc
Confidence            23689999999999999999999999999999999999999999  66544221 11  234789999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+.........+++.+.|.++..+++.+..+....++.++++++.+.+.|++.+ ..+..|.++
T Consensus       245 RvG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg  320 (391)
T PRK07309        245 RIGLIFAP---AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGA  320 (391)
T ss_pred             eeEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCee
Confidence            99999999   78888888765544567788999999999986544455667778888899999998876 477778888


Q ss_pred             EEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       318 ~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +|+|++++... .+..+++.++++++||.+.||..|+.  +++||++++. +.+++++++++|++++++.
T Consensus       321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            99999987543 24677888887789999999998764  6799999996 7889999999999988664

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=8.3e-49  Score=369.25  Aligned_cols=354  Identities=19%  Similarity=0.279  Sum_probs=295.1

Q ss_pred             HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~  100 (398)
                      +.+++.++|+.|+++    +++|+.+.+++.+.+.......|++..|..++|+++++++.+.++  +++++|++|+|+++
T Consensus        29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~  108 (409)
T PLN00143         29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH  108 (409)
T ss_pred             CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence            357899999999998    899999999999988765456798999999999999999988764  57899999999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ ++++.+|++.++++++.++  +++++++||||||.
T Consensus       109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~nP~NPTG~  185 (409)
T PLN00143        109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHF-DLLPEKGWEVDLDAVEAIADENT--IAMVIINPGNPCGS  185 (409)
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEE-eccCCCCCcCCHHHHHHhcccCC--EEEEEECCCCCCCC
Confidence            9999999999999999999999999999999999999998 764 4678899999999887655  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--  251 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--  251 (398)
                      +++.+++++|+++|+++++++|+||+|  +.+++....    ....+++++++|+||.|++||+|+||+++++. +.+  
T Consensus       186 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p-~~~~~  264 (409)
T PLN00143        186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDP-SGLLQ  264 (409)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCc-hhhhh
Confidence            999999999999999999999999999  666553221    12235789999999999999999999998421 223  


Q ss_pred             ----HHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCC
Q 015890          252 ----ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLP  325 (398)
Q Consensus       252 ----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~  325 (398)
                          ++.+...... ....+.+.|.++..+|+. ...++++..+.++++++.+.+.|++++...+ ..|++++|+|++++
T Consensus       265 ~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~  343 (409)
T PLN00143        265 ICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN  343 (409)
T ss_pred             hHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence                3333333322 223478899999999975 3468888899999999999999988765333 35778999999997


Q ss_pred             CC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          326 EK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       326 ~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ..    ..++.+++.+++.++||.+.||..|+.++++||+++. +.+++++++++|.++++...+
T Consensus       344 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~l~~~~~  407 (409)
T PLN00143        344 LLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSFCGRHAK  407 (409)
T ss_pred             hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHHhcc
Confidence            42    1246778777878999999999999888999999995 789999999999999876654

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-48  Score=366.53  Aligned_cols=364  Identities=26%  Similarity=0.416  Sum_probs=309.1

Q ss_pred             HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--C
Q 015890           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--L   87 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~   87 (398)
                      |+.....+.++++.+...+..+.++|+.|.+++++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.++  +
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la~~~~~~~~~~~   82 (382)
T PRK06108          4 AARALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVAT   82 (382)
T ss_pred             hhhhCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence            44445556677776666555789999999999999999999999887664 35698889999999999999998877  6


Q ss_pred             CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC--CCCCCChHHHHHhhccCCCC
Q 015890           88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        88 ~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~e~l~~~l~~~~~~  165 (398)
                      ++++|++++|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+.  .++.+|++.+++.++++  +
T Consensus        83 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~--~  159 (382)
T PRK06108         83 PPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCV-PLDFGGGGWTLDLDRLLAAITPR--T  159 (382)
T ss_pred             CcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEe-eCCCCCCCccCCHHHHHHhcCcc--c
Confidence            78999999999999999999999999999999999999999999999999998 7763  35678999999998765  4


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccc----c-ccCCcEEEEcccccccCCCcc
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHC----C-VEGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~----~-~~~~~~i~~~s~sK~~~~~G~  237 (398)
                      +++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+. +....    . ...+++++++|+||.||++|+
T Consensus       160 ~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~  239 (382)
T PRK06108        160 RALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW  239 (382)
T ss_pred             eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc
Confidence            89999999999999999999999999999999999999999  5543 21111    1 123678999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+.........+.+.+.|.++..+|+...+++++..++++++++.+.+.|++++++.+..|.++
T Consensus       240 RiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g  316 (382)
T PRK06108        240 RLGWLVAP---PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGA  316 (382)
T ss_pred             ceeeeeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCee
Confidence            99999998   788888877665455677899999999999876677888889999999999999988766677788889


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +|+|++++.. .+..+++++|++++||.+.||..|+.  ++++|++++. +++++++++++|.++++
T Consensus       317 ~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        317 MYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA  381 (382)
T ss_pred             EEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            9999999754 35678889888789999999998753  5799999998 89999999999988764

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=2.1e-48  Score=366.29  Aligned_cols=372  Identities=24%  Similarity=0.353  Sum_probs=305.1

Q ss_pred             hHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      ++|..+...+.+.++.++..    .|+++++|+.|.++.++++.+++++.+.+.......|++..|..++|+++++++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~   83 (405)
T PRK09148          4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR   83 (405)
T ss_pred             hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence            45555555556666555543    57889999999999888999999988877554467898888999999999999987


Q ss_pred             hcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890           84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus        84 ~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                      .+|  ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+.++.  .++.+++.++
T Consensus        84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~--~~~~l~~~~~  160 (405)
T PRK09148         84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSV-PAEPDEE--FFPALERAVR  160 (405)
T ss_pred             HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEE-eCCCCCC--CccCHHHHHh
Confidence            765  4576 89999999999999999999999999999999999999999999999999 7764432  2344555543


Q ss_pred             c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-c--c--cCCcEEEEccccccc
Q 015890          161 T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-C--V--EGDHVVNLFSFSKAY  232 (398)
Q Consensus       161 ~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~--~--~~~~~i~~~s~sK~~  232 (398)
                      . ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.... .  .  ..+.+++++|+||.+
T Consensus       161 ~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~  240 (405)
T PRK09148        161 HSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF  240 (405)
T ss_pred             hccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence            1 123589999999999999999999999999999999999999999  555442211 1  1  134678899999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+||+|+||++++   +++++.+........++.+.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+. .+.
T Consensus       241 ~~pGlR~G~~v~~---~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~  316 (405)
T PRK09148        241 SMAGWRMGFAVGN---ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGW-DIP  316 (405)
T ss_pred             CCcchheeeeeCC---HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccC
Confidence            9999999999998   889999988776667788899999999999765577888889999999999999988765 666


Q ss_pred             cCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          313 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .|.+++|+|++++...  .+..+++.++++++||.+.||..|+.  ++++||+++ .+.+++.+++++|.+++....++
T Consensus       317 ~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~~~  394 (405)
T PRK09148        317 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSADET  394 (405)
T ss_pred             CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHHHH
Confidence            7888999999997532  23567888887789999999998854  579999998 48899999999999999887664

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=2.2e-48  Score=366.59  Aligned_cols=355  Identities=21%  Similarity=0.284  Sum_probs=299.3

Q ss_pred             HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~  100 (398)
                      .+|.++++|+.|+|.    +++|+.+.+++.+.+.......|++..|..++|+++++++.+.++  +++++|++|+|+++
T Consensus        28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~  107 (409)
T PLN02656         28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ  107 (409)
T ss_pred             ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence            467899999999997    788999999999988765567898999999999999999988764  56889999999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++..++.+++++||+|++++|+|+.+...++..|++++.+ +.+ ++++.+|++.+++.+++++  +++++++|+||||.
T Consensus       108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~NPtG~  184 (409)
T PLN02656        108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYV-DLLPEKGWEVDLDAVEALADQNT--VALVIINPGNPCGN  184 (409)
T ss_pred             HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEE-eCCCcCCCCCCHHHHHHHhccCc--eEEEEECCCCCCCC
Confidence            9999999999999999999999999988888899999999 774 4577899999999988765  88999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCC-----c
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----V  248 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~-----~  248 (398)
                      +++.+++++|+++|+++|+++|+||+|  +.+++.....    ...+++++++|+||.|++||+|+||+++++.     .
T Consensus       185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~  264 (409)
T PLN02656        185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD  264 (409)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCccccccc
Confidence            999999999999999999999999999  6665532211    1245799999999999999999999998521     1


Q ss_pred             HHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCC
Q 015890          249 EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE  326 (398)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~  326 (398)
                      +++++.+...... ..+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+.++... +..|.+++|+|++++.
T Consensus       265 ~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~  343 (409)
T PLN02656        265 PKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNL  343 (409)
T ss_pred             HHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecch
Confidence            4677777765442 245688999999999975 346788889999999999999998876533 3568889999999863


Q ss_pred             C----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          327 K----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       327 ~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .    ..++.+++.++++++||.+.||+.|+.++++||+++. +++++++++++|++++....+
T Consensus       344 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~~~~~~~~  406 (409)
T PLN02656        344 SLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKSFYLRHSK  406 (409)
T ss_pred             hhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence            2    1235566767778999999999999888999999996 889999999999998876553

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.8e-48  Score=364.82  Aligned_cols=370  Identities=24%  Similarity=0.395  Sum_probs=302.1

Q ss_pred             hHHhhccCchHHHHHHHHH----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      ++++.....+.+..+.++.    ..+.++++|+.|.++...|+.+++++.+.+.......|++..|..++|+++++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~   86 (403)
T PRK08636          7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR   86 (403)
T ss_pred             HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            4555555555555544443    356789999999988877788888887766544467898889999999999999988


Q ss_pred             hcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHH----H
Q 015890           84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADW----L  155 (398)
Q Consensus        84 ~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~----l  155 (398)
                      .++  ++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ +.+ ++++.+|++.    +
T Consensus        87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  165 (403)
T PRK08636         87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKM-PLEYNEDFELDEDQFFENL  165 (403)
T ss_pred             HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-eccccccCccChhhhhhHH
Confidence            776  4566 79999999999999999999999999999999999999999999999998 775 3456788775    4


Q ss_pred             HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEcc
Q 015890          156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFS  227 (398)
Q Consensus       156 ~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s  227 (398)
                      ++.++. ..+++++++++|+||||.+++.+++++|+++|++|++++|+||+|  +.+++....   ..  ..+.+++++|
T Consensus       166 ~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S  245 (403)
T PRK08636        166 EKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYT  245 (403)
T ss_pred             HHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEe
Confidence            555543 233689999999999999999999999999999999999999999  666543211   11  1246778999


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      +||.||+||+|+||++.+   +++++.+.........+.+.+.|.++..+++....++++.++.+.++++.+.+.|++.+
T Consensus       246 ~SK~~~~~GlRiG~iv~~---~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  322 (403)
T PRK08636        246 LSKSYNMAGWRVGFVVGN---KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG  322 (403)
T ss_pred             cccccCCccceeeeeeCC---HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999998   78888887776544566778888888777764457788888899999999999998876


Q ss_pred             CCccccCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      . .+..+.+++|+|+++++..  .++.+++.++++++||.+.||..|+.  ++++||+++ .+++++++++++|+++++.
T Consensus       323 ~-~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~  400 (403)
T PRK08636        323 W-ELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKE  400 (403)
T ss_pred             C-cccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence            4 7777888999999998542  24678888887789999999998864  579999999 5889999999999998866

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=2.2e-48  Score=365.25  Aligned_cols=369  Identities=27%  Similarity=0.430  Sum_probs=305.6

Q ss_pred             hhHhHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |++++|+.....+.++.+.+.    ...+.++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   79 (388)
T PRK07337          1 MRLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW   79 (388)
T ss_pred             CchhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            567777765555555543333    3357889999999999988899999998877643 56798888999999999999


Q ss_pred             HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~  157 (398)
                      +++.++  +++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++++++
T Consensus        80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~  158 (388)
T PRK07337         80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLV-PSGPAERFQLTAADVEA  158 (388)
T ss_pred             HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCcCCHHHHHh
Confidence            988765  478899999999999999999999999999999999999999999999999998 7764 457899999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-ccCCcEEEEcccccccCC
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-VEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~~~~~~i~~~s~sK~~~~  234 (398)
                      .+++++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.+..... ...+++++++|+||.||+
T Consensus       159 ~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~  236 (388)
T PRK07337        159 AWGERT--RGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM  236 (388)
T ss_pred             hcCccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC
Confidence            998765  89999999999999999999999999999999999999999  6554432221 124678899999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      +|+|+||++++   +++++.+.........+.+.+.|.++..++... ..++.+.++.++++++.+.+.|++.+......
T Consensus       237 ~G~RiG~~~~~---~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~  313 (388)
T PRK07337        237 TGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVM  313 (388)
T ss_pred             chhheeeeecC---HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence            99999999999   788888887776556678899999988888752 24567778888899999999998876522246


Q ss_pred             CCccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       314 ~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      |.+++|+|++++..    ..++.+++.++++++||.+.||..|+.   .+++|++++. +.+++++++++|.+++
T Consensus       314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF  387 (388)
T ss_pred             CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence            77899999999742    235678888888889999999998864   5799999997 7889999999998754

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-48  Score=366.16  Aligned_cols=369  Identities=26%  Similarity=0.437  Sum_probs=313.1

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +++|+.......++++.+..+...+.++|+.|.+++++++.+.+++.+.+... ...|.+..|.+++|+++++++.+.+|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g   88 (391)
T PRK08361         10 IAGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYG   88 (391)
T ss_pred             hhHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            57777776677778877776666789999999999988899999998877653 45688889999999999999987764


Q ss_pred             --CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCC
Q 015890           87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP  163 (398)
Q Consensus        87 --~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~  163 (398)
                        +++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.+ +.+.+ ++.+|++.+++.++.++
T Consensus        89 ~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~  167 (391)
T PRK08361         89 VDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRI-PLREENEFQPDPDELLELITKRT  167 (391)
T ss_pred             CCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhccccc
Confidence              668899999999999999999999999999999999999999999999999999 87654 46799999999998764


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cccCCcEEEEcccccccCCCcce
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                        +++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+++... .  ....+++++++|+||.||++|+|
T Consensus       168 --~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR  245 (391)
T PRK08361        168 --RMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWR  245 (391)
T ss_pred             --EEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhh
Confidence              89999999999999999999999999999999999999999  55543221 1  12246789999999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +||++++   +++++.+........++.+.+.|.++..+++...  .++++.++.++++++.+.+.|++++++.+..+++
T Consensus       246 iG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g  322 (391)
T PRK08361        246 LGFVIAP---EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG  322 (391)
T ss_pred             hhhhccC---HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence            9999998   7888888766654556778899999999998643  4678888889999999999999876667888888


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++|+|++++....+..++..++++++||.+.||..|+.  ++++||+++. +++++++++++|.+++++
T Consensus       323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence            89999999753346788888887778999999998864  5799999996 778999999999988754

>PLN02187 rooty/superroot1

Probab=100.00  E-value=2.2e-48  Score=369.71  Aligned_cols=354  Identities=21%  Similarity=0.314  Sum_probs=295.3

Q ss_pred             CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~  102 (398)
                      ++++++|+.|+|.    +.+++++.+++.+.+.......|++..|..++|+++++++++.++  +++++|++|+|+++++
T Consensus        65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al  144 (462)
T PLN02187         65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGI  144 (462)
T ss_pred             CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHH
Confidence            5789999999887    556788999999888765556898899999999999999987654  6789999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      ..++.+++++||+|+++.|+|+.+...++..|++++.+ +.. ++++.+|++.+++++++++  +++++++|+||||.++
T Consensus       145 ~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~l~~~~~~~~d~~~l~~~~~~~~--~~v~i~nP~NPTG~v~  221 (462)
T PLN02187        145 EIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKF-DLLPEKEWEIDLEGIEAIADENT--VAMVVINPNNPCGNVY  221 (462)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-eCccccCCccCHHHHHHhcCCCc--EEEEEeCCCCCCCCcc
Confidence            99999999999999999999999999999999999988 664 3468899999999988765  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc---cCCcEEEEcccccccCCCcceeEEEEccCCcHH---HH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---FA  252 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~---~~  252 (398)
                      +.+++++|+++|+++|+++|+||+|  +.|++.+. ...   ...++++++|+||.|++||+|+||+++++. +.   ++
T Consensus       222 s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p-~~~~~~~  300 (462)
T PLN02187        222 SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDP-EGVFETT  300 (462)
T ss_pred             CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCc-hhHHHHH
Confidence            9999999999999999999999999  66655332 111   123689999999999999999999998531 22   33


Q ss_pred             HHHHHhhccCCC--CcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCC-
Q 015890          253 TQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK-  327 (398)
Q Consensus       253 ~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-  327 (398)
                      +.+.........  +++.+.|.++..+|+. ...++++.++.+.++++.+.+.|++++... +..|.+++|+|++++.. 
T Consensus       301 ~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~  380 (462)
T PLN02187        301 KVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL  380 (462)
T ss_pred             HHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh
Confidence            455555544333  4588999999999975 347889999999999999999999887543 34677889999987531 


Q ss_pred             ---CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          328 ---HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       328 ---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                         ..++.+++.++++++||.+.||..|+.+++|||+++. .++.+++++++|.++++...+.
T Consensus       381 ~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~~  442 (462)
T PLN02187        381 MDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAKK  442 (462)
T ss_pred             CCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhhc
Confidence               1245678888888999999999999888999999996 7899999999999999877654

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=2.9e-48  Score=363.34  Aligned_cols=362  Identities=24%  Similarity=0.346  Sum_probs=301.9

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      ...|+.....+.+..+.+.. +..++++|+.|.+++++++.+.+++.+.+... ...|++..|..++|+++++++++.+|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g   84 (384)
T PRK12414          7 PRSKLPDVGTTIFTVIGQLA-AQHDALNLSQGAPNFAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYG   84 (384)
T ss_pred             HHHhcccCCccHHHHHHHHH-HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhC
Confidence            34555555556665555544 55789999999999988999999998877643 46798899999999999999998877


Q ss_pred             CC--C-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890           87 LY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        87 ~~--~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      ++  + ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+ +.+++++.+|++.+++.++++ 
T Consensus        85 ~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~-  162 (384)
T PRK12414         85 ARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAI-KLSPEDFRVNWDEVAAAITPR-  162 (384)
T ss_pred             CCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEE-ecCccccccCHHHHHhhcCcc-
Confidence            64  3 589999999999999999999999999999999999999999999999999 887667789999999999765 


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc----ccCCcEEEEcccccccCCCc
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC----VEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~----~~~~~~i~~~s~sK~~~~~G  236 (398)
                       +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ..    ...+++++++|+||.||+||
T Consensus       163 -~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG  241 (384)
T PRK12414        163 -TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG  241 (384)
T ss_pred             -cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence             499999999999999999999999999999999999999999  66654322 11    11357899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +|+||++++   +++++.+........++.+.+.|.++..+|+... +..+..+.++++++.+.+.|++.+. .+..+.+
T Consensus       242 lRiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~-~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~g  316 (384)
T PRK12414        242 WRVGYCLAP---AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPA-SYLGLGAFYQRKRDLLARELAGSRF-ELLPSEG  316 (384)
T ss_pred             ceEEEEecC---HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCCh-HHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCc
Confidence            999999999   7888888887766677889999999999998633 3445677888899999999998764 7777888


Q ss_pred             cEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       317 ~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ++|+|+++++. ..++.+++.++++++||.+.||+.|+.    .+++||+++. +++++++++++|.+
T Consensus       317 g~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~  383 (384)
T PRK12414        317 SFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS  383 (384)
T ss_pred             ceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            89999988642 124667777777889999999998742    4789999997 78899999988864

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.9e-48  Score=363.88  Aligned_cols=364  Identities=21%  Similarity=0.325  Sum_probs=296.8

Q ss_pred             HhHHhhccCchHHHHHH----HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~----~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.......+..+.    +..+.|.+.++|+.|.+..++|+.+++++.+.+.......|++..|.+++|++++++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~   87 (394)
T PRK05942          8 PADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYH   87 (394)
T ss_pred             hhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHH
Confidence            45555444433333322    23346788999999988877777788887777654445789888999999999999998


Q ss_pred             hhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHh
Q 015890           83 QENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKT  158 (398)
Q Consensus        83 ~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~  158 (398)
                      +.++  ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...+...|.+++.+ +.+. +++.+|++.+++.
T Consensus        88 ~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~  166 (394)
T PRK05942         88 RRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPI-ILKPENDWLIDLSSIPEE  166 (394)
T ss_pred             HHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEe-ecCCccCCccCHHHHHHh
Confidence            8766  4576 48999999999999999999999999999999999998889999999999 8764 4678999999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc--CCcEEEEcccccc
Q 015890          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE--GDHVVNLFSFSKA  231 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~--~~~~i~~~s~sK~  231 (398)
                      ++++  ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.....   ..  .+.+++++|+||.
T Consensus       167 ~~~~--~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~  244 (394)
T PRK05942        167 VAQQ--AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKT  244 (394)
T ss_pred             cccc--ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhc
Confidence            8765  499999999999999999999999999999999999999999  6655432211   11  3457889999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      ||++|+|+||++++   +++++.+........++.+.+.|.++..+++....+.++.++.++++++.+.+.|++.+. .+
T Consensus       245 ~~~~GlRiG~i~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~  320 (394)
T PRK05942        245 YNMAGWRVGFVVGN---RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGW-NI  320 (394)
T ss_pred             cCChhhheeeeecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-ee
Confidence            99999999999998   889999987776556778889999999999765577888888899999999999988764 67


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ..+.+++|+|++++... +..+++.++++++||.+.||..|+  ..+++|++++. +.+.+.+++++|.+
T Consensus       321 ~~~~~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~  388 (394)
T PRK05942        321 PPTKATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQ  388 (394)
T ss_pred             cCCCeeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence            77887889999997543 567788778888999999999885  35799999985 56677777776654

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=4.8e-48  Score=365.22  Aligned_cols=352  Identities=21%  Similarity=0.298  Sum_probs=295.6

Q ss_pred             CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~  102 (398)
                      ++++++|+.|+|.    +++++++.+++.+.+.......|++..|..++|+++++++.+.++  +++++|++|+|+++++
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al  130 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI  130 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence            7799999999984    678899999999988765456798888999999999999987664  4688999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      +.++.++.++||+|+++.|+|+.|...+...|++++.+ +.. ++++.+|++.+++.+++++  +++++++|+||||.++
T Consensus       131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~P~NPtG~v~  207 (430)
T PLN00145        131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHF-DLLPERGWEVDLEGVEALADENT--VAMVIINPNNPCGSVY  207 (430)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-eCCcccCCcCCHHHHHHHhCcCc--eEEEEeCCCCCCCCCC
Confidence            99999999999999999999999999999999999988 643 4568899999999998765  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH---
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA---  252 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~---  252 (398)
                      +.+++++|+++|+++|+++|+||+|  +.|++.+...    ...+++++++|+||.|++||+|+||++.++. +.++   
T Consensus       208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~-~~~~~~~  286 (430)
T PLN00145        208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDP-NGILKET  286 (430)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecc-hhhhhhh
Confidence            9999999999999999999999999  6665432211    1245799999999999999999999987421 2332   


Q ss_pred             ---HHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCC
Q 015890          253 ---TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK  327 (398)
Q Consensus       253 ---~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~  327 (398)
                         +.+..... ...+.+.+.|.++..+|+. .++++++.++.++++++.+.+.|+.++++.+ ..|++++|+|++++..
T Consensus       287 ~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~  365 (430)
T PLN00145        287 KVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS  365 (430)
T ss_pred             HHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence               33433332 2345678999999999986 3477889999999999999999998866564 4688999999998642


Q ss_pred             ----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          328 ----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       328 ----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                          ..++.+++.++++++||.+.||..|+.++++||+++. +.+++++++++|.+++.+..+
T Consensus       366 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~~  427 (430)
T PLN00145        366 CLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHAK  427 (430)
T ss_pred             hcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence                1256788888988999999999999988999999995 889999999999999987664

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=2.4e-48  Score=363.87  Aligned_cols=358  Identities=23%  Similarity=0.385  Sum_probs=301.6

Q ss_pred             HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEE
Q 015890           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMV   94 (398)
Q Consensus        18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~   94 (398)
                      .++++.+...+.++.++|+.|.+++++++.+.+++.+.+... ...|++..|..++|+++++++.+.+++  +++ +|++
T Consensus         8 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~   86 (378)
T PRK07682          8 GIRKFFDLAANMEGVISLGVGEPDFVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV   86 (378)
T ss_pred             HHHHHHHHHHhcCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE
Confidence            344444444444689999999999988888889888876543 567988899999999999999887664  454 7999


Q ss_pred             ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      |+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+ +.+. +++.+|++.+++++.++  ++++++++|
T Consensus        87 t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~--~~~v~~~~p  163 (378)
T PRK07682         87 TVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPV-ATTLENEFKVQPAQIEAAITAK--TKAILLCSP  163 (378)
T ss_pred             eCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHhhcCcc--cEEEEEECC
Confidence            9999999999999999999999999999999999999999999888 7653 35778999999999765  499999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cc--cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      +||||.+++.+++++|+++|+++++++|+||+|  +.+++...+  ..  ..+++++++|+||.|+++|+|+||++++  
T Consensus       164 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--  241 (378)
T PRK07682        164 NNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--  241 (378)
T ss_pred             CCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--
Confidence            999999999999999999999999999999999  666542111  11  1367999999999999999999999998  


Q ss_pred             cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                       +++++.+........++.+.+.|.++..+|+.+..++++.++.++++++.+.+.|++++. .+..|++++|+|+.++..
T Consensus       242 -~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~~~~~  319 (378)
T PRK07682        242 -VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPSISST  319 (378)
T ss_pred             -HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEeccCC
Confidence             789998877665555678899999999999876667888888999999999999998865 677788889999988543


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..+..++++++++++||.+.||..|+.  ++++||+++. +.+++++++++|+++++++
T Consensus       320 ~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        320 GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             CCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence            346788888887788999999998864  6899999997 7899999999999988653

>PRK07324 transaminase; Validated

Probab=100.00  E-value=5.7e-49  Score=366.17  Aligned_cols=346  Identities=22%  Similarity=0.293  Sum_probs=299.0

Q ss_pred             HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      ...++++++|+.|.+.+..|+.+ +++.+++.+. ...|++..|.+++|+++++++.   ++++++|++|+|+++++..+
T Consensus        22 ~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~~~   96 (373)
T PRK07324         22 DIAESCIDSLTLEELLALAGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANFLV   96 (373)
T ss_pred             ccccCCCCCCcHHHHHhccCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHHHH
Confidence            34688999999999988878887 8888777664 4589888999999999999884   46789999999999999999


Q ss_pred             HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      +.+++++||+|+++.|+|..+...++..|.+++.+ +.+. +++.+|++.+++.+++++  ++|++++|+||||.+++.+
T Consensus        97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--kli~i~~p~NPtG~~~~~~  173 (373)
T PRK07324         97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYW-QLKEENGWLPDLDELRRLVRPNT--KLICINNANNPTGALMDRA  173 (373)
T ss_pred             HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhCCCCC--cEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999 7764 467889999999887654  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      ++++|+++|+++|+++|+||+|  +.+++... .....+++++++|+||.+|++|+|+||++++   +++++.+.+....
T Consensus       174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~---~~li~~~~~~~~~  250 (373)
T PRK07324        174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN---EEVIDILRKYRDY  250 (373)
T ss_pred             HHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC---HHHHHHHHHHhCc
Confidence            9999999999999999999999  55543211 1222467899999999999999999999998   8999999888876


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                      ...+.+.+.+.++..+++..+.++++.++.++++++.+.+.|++.+.+.+..|.+++++|+.++.. .+..+++.+++++
T Consensus       251 ~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~-~~~~~~~~~ll~~  329 (373)
T PRK07324        251 TMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD-MPSEDFCLKLLKE  329 (373)
T ss_pred             EEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC-CCHHHHHHHHHHh
Confidence            677888899999888887645677888888899999999999887666777888888888888653 3678899998888


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +||.+.||+.|+.++++||+++. +++.+.+++++|.+++++.
T Consensus       330 ~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        330 TGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             cCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            99999999999888999999996 7899999999999988753

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=4.7e-48  Score=373.92  Aligned_cols=371  Identities=19%  Similarity=0.332  Sum_probs=298.8

Q ss_pred             hhHhHHhhccCchHH----HHHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015890            5 AKLAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL   77 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l   77 (398)
                      |++++|+.....+..    ....++...|+++++|+.|.+   ++++|+.+++++.+.+..  ...|++..|..++|+++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReai  194 (517)
T PRK13355        117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAI  194 (517)
T ss_pred             CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHH
Confidence            446777776554333    345555667899999999987   466799999999888764  45798899999999999


Q ss_pred             HHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHH
Q 015890           78 VKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADW  154 (398)
Q Consensus        78 ~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~  154 (398)
                      ++++++.++  +++++|++|+|++++++.++.+++++||+|+++.|+|+.|...++..|.+++.+ +.+++ +|.+|+++
T Consensus       195 a~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~-~~~~~~~~~~d~~~  273 (517)
T PRK13355        195 MQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHY-RCDEQSEWYPDIDD  273 (517)
T ss_pred             HHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEe-ecCcccCCCCCHHH
Confidence            999987763  678999999999999999999999999999999999999999999999999998 77644 68899999


Q ss_pred             HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cccCC-cEEEEccc
Q 015890          155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGD-HVVNLFSF  228 (398)
Q Consensus       155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~-~~i~~~s~  228 (398)
                      +++.+++++  ++|++++||||||.+++.+++++|+++|++||+++|+||+|  +.|++....   ....+ .+++++|+
T Consensus       274 l~~~~~~~~--k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~  351 (517)
T PRK13355        274 IRSKITSRT--KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGL  351 (517)
T ss_pred             HHHhcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecc
Confidence            999998765  99999999999999999999999999999999999999999  666653221   11122 35667999


Q ss_pred             ccccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC---chHHHHHHHHHHHHHHHHHH
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~  301 (398)
                      ||.|+++|+|+||++.+.+ ++    +++.+.... ....+.+.++|.++..+|...   .+++.+. +.+.++++.+.+
T Consensus       352 SK~~~~~G~RiG~~i~~~~-~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~  428 (517)
T PRK13355        352 SKSHMIAGYRIGWMILSGN-KRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYN  428 (517)
T ss_pred             hhhccCcccceEEEEeeCc-hhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHH
Confidence            9999999999999985421 33    344443322 234678899999999999742   2344443 345566888999


Q ss_pred             HhccCCCCccccCCccEEEEeeCCCC---CCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHH
Q 015890          302 ALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       302 ~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                      .|++++++.+..|++++|+|++++..   ..++.+++.++++++||.+.||+.|+  .+++|||+++ .+++++++++++
T Consensus       429 ~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~r  507 (517)
T PRK13355        429 ALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDR  507 (517)
T ss_pred             HHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHH
Confidence            99988666888899999999988642   12466778788889999999999986  4789999997 588999999999


Q ss_pred             HHHHHHHH
Q 015890          377 LRRGLEEL  384 (398)
Q Consensus       377 l~~~~~~~  384 (398)
                      |.++++..
T Consensus       508 l~~~~~~~  515 (517)
T PRK13355        508 LADFFSYY  515 (517)
T ss_pred             HHHHHHHh
Confidence            99998754

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.8e-48  Score=361.56  Aligned_cols=345  Identities=21%  Similarity=0.337  Sum_probs=292.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCC-cEEEecChHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKS-SVMVTAGANQAFVN  104 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~-~v~~~~g~t~a~~~  104 (398)
                      +.+.++|+.|.+++.+++.+.+++.+.+.......|+ ..|..++|+++++++++.+|   ++++ +|++|+|+++++..
T Consensus        43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~  121 (410)
T PRK06290         43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM  121 (410)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence            5679999999999999999999988876544456685 58999999999999988765   5565 79999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      ++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+++ ++.+|++.+++.+..+  +++|++++||||||.+++.
T Consensus       122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~--~k~i~l~nP~NPTG~v~s~  198 (410)
T PRK06290        122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNL-PLLEENNFLPDLDSIPKDIKEK--AKLLYLNYPNNPTGAVATK  198 (410)
T ss_pred             HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-ecCCCcCCcCCHHHHHHhhccc--ceEEEEECCCCCCCcCCCH
Confidence            999999999999999999999999999999999999 88754 5778999999988765  4999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +++++|+++|+++|++||+||+|  +.+++...+.  .  ..+++++++|+||.+|++|+|+||++++   +++++.+..
T Consensus       199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~---~~l~~~l~~  275 (410)
T PRK06290        199 EFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN---ELIVKAFAT  275 (410)
T ss_pred             HHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC---HHHHHHHHH
Confidence            99999999999999999999999  5554422221  1  2356799999999999999999999998   889998887


Q ss_pred             hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC------CCh
Q 015890          258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------LDD  331 (398)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  331 (398)
                      .......+.+.+.|.++..+++. .++.++..+.+.++++.+.+.|++.+. .+..+++++|+|++++...      .+.
T Consensus       276 ~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~f~l~v~lp~~~~~~~~~~~~  353 (410)
T PRK06290        276 VKDNNDSGQFIAIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNEVGF-KAEMPGGTFYLYVKAPKGTKSGIKFENA  353 (410)
T ss_pred             HHhccccCCcHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCeeeEEEEECCCccccCCCCCCH
Confidence            77666666777899999999986 467888888999999999999998864 7777888999999997542      357


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+++++|+++.++.+.||..|  .+++||+++.  .++++.++++++|.+.+.++
T Consensus       354 ~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        354 EEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             HHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            789999987777888888755  3799999985  36778899999998888764

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=5.3e-48  Score=363.11  Aligned_cols=352  Identities=22%  Similarity=0.364  Sum_probs=295.6

Q ss_pred             cCchHHHHHHHHHH-----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--
Q 015890           14 TEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--   86 (398)
Q Consensus        14 ~~~~~~~~~~~~~~-----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--   86 (398)
                      .+.+.+.++.++.+     +|.+.++|+.|.|++++|+.+.+++.+.+..  ...|++..|.+++|+++++++.+.++  
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~   84 (393)
T TIGR03538         7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLP   84 (393)
T ss_pred             CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence            33455666666554     5789999999999999999999999987653  67898889999999999999988764  


Q ss_pred             --CCCC-cEEEecChHHHHHHHHHHhccCCCE--EEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc
Q 015890           87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDS--VVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE  160 (398)
Q Consensus        87 --~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~  160 (398)
                        ++++ +|++|+|+++++..++.+++++||+  |+++.|+|..+...++..|++++.+ +.+ ++++.+|++.+++.+.
T Consensus        85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~  163 (393)
T TIGR03538        85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFL-NCTAENGFLPDFDAVPESVW  163 (393)
T ss_pred             ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEe-eccccCCCCCCHHHHHHHHh
Confidence              4564 7999999999999999999999986  9999999999999999999999999 876 4468899999999887


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--Ccccc---------ccCCcEEEEcc
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--RKHCC---------VEGDHVVNLFS  227 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~~~~~---------~~~~~~i~~~s  227 (398)
                      ++  ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++  .....         ...+++++++|
T Consensus       164 ~~--~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S  241 (393)
T TIGR03538       164 RR--CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS  241 (393)
T ss_pred             hc--ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence            65  499999999999999999999999999999999999999999  55543  11110         12468999999


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      +||.|+++|+|+||++++   +++++.+.........+.+.+.|.++...+.. ++++++.++.++++++.+.+.|++. 
T Consensus       242 ~SK~~~~~GlRvG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~-  316 (393)
T TIGR03538       242 LSKRSNLPGLRSGFVAGD---AEILKAFLRYRTYHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQV-  316 (393)
T ss_pred             chhhcCCcccceEEEecC---HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence            999999999999999999   78888887776655667788899888888864 5678888889999999999999875 


Q ss_pred             CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                       ..+..|.+++|+|++++   .+..+++.++++++||.+.||+.|+        ..+++||+++. +++++++++++|.+
T Consensus       317 -~~~~~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~  391 (393)
T TIGR03538       317 -LDLELPDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRS  391 (393)
T ss_pred             -CcccCCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence             24567888999999997   2467888888778999999999874        14689999997 78999999999876


Q ss_pred             H
Q 015890          380 G  380 (398)
Q Consensus       380 ~  380 (398)
                      +
T Consensus       392 ~  392 (393)
T TIGR03538       392 F  392 (393)
T ss_pred             h
Confidence            4

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=8.9e-48  Score=361.04  Aligned_cols=365  Identities=24%  Similarity=0.373  Sum_probs=307.4

Q ss_pred             hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-
Q 015890            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-   86 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-   86 (398)
                      ++|+...+.+.++.+.++..+ .+.++|+.|.++.+.|+.+.+++.+.+.+. ...|++..|..++|+++++++++.++ 
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~   82 (387)
T PRK08912          5 NPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGL   82 (387)
T ss_pred             hHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence            566666666777777776654 689999999998888888999888776543 46798889999999999999988766 


Q ss_pred             -CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890           87 -LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (398)
Q Consensus        87 -~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~  164 (398)
                       ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+++++.+|++.+++.++.+  
T Consensus        83 ~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~--  159 (387)
T PRK08912         83 DLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLV-RLEPPHWRLPRAALAAAFSPR--  159 (387)
T ss_pred             CCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccCcCCHHHHHHHhCcc--
Confidence             4677 89999999999999999999999999999999999999999999999998 876656788999999998765  


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEEcccccccCCCcc
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~~s~sK~~~~~G~  237 (398)
                      ++++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+++...   ...  ..+++++++|+||.||++|+
T Consensus       160 ~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  239 (387)
T PRK08912        160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW  239 (387)
T ss_pred             ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence            489999999999999999999999999999999999999999  66554221   111  13678999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+........++.++..+.++..++....+++++.++.++++++.+.+.|++.+. .+..+.++
T Consensus       240 RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~  315 (387)
T PRK08912        240 KVGFVCAA---PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGF-PVLPSQGT  315 (387)
T ss_pred             eeEEEecC---HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcc
Confidence            99999998   788888877766555677777888888888654577888889999999999999998864 77778888


Q ss_pred             EEEEeeCCC-C-CCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPE-K-HLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       318 ~~~~~~~~~-~-~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +|+|+++++ . ..+..+++.++++++||.+.||..|+    ..+++|++++. +++.+++++++|.++++
T Consensus       316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~  385 (387)
T PRK08912        316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARR  385 (387)
T ss_pred             eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence            999999975 2 23577888888778899999999874    25799999997 68899999999988765

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=9.6e-48  Score=362.89  Aligned_cols=354  Identities=20%  Similarity=0.300  Sum_probs=296.0

Q ss_pred             HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--------CCCCcEEE
Q 015890           27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--------LYKSSVMV   94 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--------~~~~~v~~   94 (398)
                      .+++++++|+.|.|+    +.+++.+.+++.+.+.......|++..|..++|+++++++++.++        +++++|++
T Consensus        30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i  109 (412)
T PTZ00433         30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL  109 (412)
T ss_pred             CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence            378999999999986    467899999998877654467898888999999999999987543        67899999


Q ss_pred             ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      |+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.++.+  +++|++++|
T Consensus       110 t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~--~~~i~~~~p  186 (412)
T PTZ00433        110 CSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFY-NCRPEKDWEADLDEIRRLVDDR--TKALIMTNP  186 (412)
T ss_pred             eCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEE-ecCccccCcCCHHHHHHHhccC--ceEEEEeCC
Confidence            9999999999999999999999999999999999999999999999 7754 45678999999988765  499999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-cCCcEEEEcccccccCCCcceeEEEEc--c
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-EGDHVVNLFSFSKAYGMMGWRVGYIAY--P  245 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~--~  245 (398)
                      |||||.+++.+++++|+++|+++|+++|+||+|  +.+++....   .. ...++++++|+||.||+||+|+||+++  +
T Consensus       187 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p  266 (412)
T PTZ00433        187 SNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDP  266 (412)
T ss_pred             CCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCC
Confidence            999999999999999999999999999999999  656543211   11 123578999999999999999999996  2


Q ss_pred             CC-cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890          246 SE-VEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  323 (398)
Q Consensus       246 ~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  323 (398)
                      .. .+++++.+..... ..++.+.+.|.++..++... +.++++.++.++++++.+.+.|++..+..+..|++++|+|++
T Consensus       267 ~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~  345 (412)
T PTZ00433        267 HGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSR  345 (412)
T ss_pred             cccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEE
Confidence            11 1457777766543 23578899999999988753 477888889999999999999988655577778889999999


Q ss_pred             CCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          324 LPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       324 ~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ++..    ..+..++++.+++++||.+.||..|+.++++|++++. .++++++++++|.++++...
T Consensus       346 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~~~~~~~~  410 (412)
T PTZ00433        346 LDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIKAFCERHK  410 (412)
T ss_pred             echhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhc
Confidence            8642    1246788888886789999999999888999999996 68899999999999887654

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-47  Score=360.14  Aligned_cols=371  Identities=28%  Similarity=0.464  Sum_probs=314.1

Q ss_pred             hhHhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |++++|+.+.+...+.++.++.+    ++.+.++|+.|.++.++++.+.+++.+.+.+. ...|++..|..++|+.++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~   80 (393)
T PRK05764          2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAK   80 (393)
T ss_pred             cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHH
Confidence            56888888777666666554443    46889999999999988999999998887654 45698888999999999999


Q ss_pred             HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~  157 (398)
                      +.+.++  +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+. .++.+|++.+++
T Consensus        81 ~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~  159 (393)
T PRK05764         81 LKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEA  159 (393)
T ss_pred             HHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEE-ecCcccCCcCCHHHHHH
Confidence            988765  567899999999999999999999999999999999999999999999999999 7763 467889999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---cc---cccCCcEEEEcccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---HC---CVEGDHVVNLFSFS  229 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~~---~~~~~~~i~~~s~s  229 (398)
                      .+++++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++..   ..   ....+++++++|+|
T Consensus       160 ~l~~~~--~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S  237 (393)
T PRK05764        160 AITPKT--KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS  237 (393)
T ss_pred             hhCccc--eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence            997654  89999999999999999999999999999999999999999  5554422   11   12245789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.+|++|+|+||++.+   +++++.+.........+++.+.|.++..+++...+++++..+.+.++++.+.+.|++++++
T Consensus       238 K~~~~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~  314 (393)
T PRK05764        238 KAYAMTGWRLGYAAGP---KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGL  314 (393)
T ss_pred             ccccCccceeEEEecC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            9999999999999988   8899888877766667888999999999997435777888888899999999999988555


Q ss_pred             ccccCCccEEEEeeCCCCCC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+..+.+++|+|+.++....    ++.++...+++++||.+.+|..|+.++++||+++. +++++++++++|.+++++
T Consensus       315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~~~~  391 (393)
T PRK05764        315 ECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERFLES  391 (393)
T ss_pred             cccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence            77778888999999875432    24788888887899999999988778999999996 799999999999998864

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=1.3e-47  Score=363.12  Aligned_cols=358  Identities=22%  Similarity=0.292  Sum_probs=290.4

Q ss_pred             HHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890           25 LVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN   99 (398)
Q Consensus        25 ~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t   99 (398)
                      ....|.++++++.|+|   ++++|+.+.+++.+.+.+.....|++..|..++|+++++++++.++  +++++|++|+|++
T Consensus        27 ~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~  106 (433)
T PRK06855         27 LEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG  106 (433)
T ss_pred             HHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence            3456788999999998   6788999999988877655567899999999999999999988765  5688999999999


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHH-HhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      +++..++. ++++||.|+++.|+|+.+.... ...|++++.+ +.++ +++.+|+++|++.++....++++++++|+|||
T Consensus       107 ~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPT  184 (433)
T PRK06855        107 DAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTY-RLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPT  184 (433)
T ss_pred             HHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEE-ecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCC
Confidence            99999985 7899999999999999876542 3458888888 7764 56889999999999743335899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---ccC-CcEEEEcccccccCCCcceeEEEEccCC--cH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE  249 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~--~~  249 (398)
                      |.+++.+++++|+++|+++|+++|+||+|  +.|++.....   ... ..+++++|+||.+++||+|+||+++++.  .+
T Consensus       185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~  264 (433)
T PRK06855        185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDE  264 (433)
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhh
Confidence            99999999999999999999999999999  6665532211   112 3579999999999999999999997421  02


Q ss_pred             ---HHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890          250 ---GFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL  324 (398)
Q Consensus       250 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  324 (398)
                         ++++.+..... ...+++.+.|.++..+++.+  +.++++.++.++++++.+.+.|++.++..+..|++++|+|+++
T Consensus       265 ~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l  343 (433)
T PRK06855        265 VFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF  343 (433)
T ss_pred             HHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence               23333333322 23467889999999999864  4678888999999999999999887555777888899999999


Q ss_pred             CCCC--------------------------CChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHH
Q 015890          325 PEKH--------------------------LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       325 ~~~~--------------------------~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      ++..                          .++.+++.++++++||.+.||..|+. ..++|||++..+++++++++++|
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l  423 (433)
T PRK06855        344 EDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTL  423 (433)
T ss_pred             ccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHH
Confidence            8632                          13567787888899999999999864 35799999987899999999999


Q ss_pred             HHHHHHHh
Q 015890          378 RRGLEELV  385 (398)
Q Consensus       378 ~~~~~~~~  385 (398)
                      .+++++..
T Consensus       424 ~~~~~~~~  431 (433)
T PRK06855        424 AEKIEEYL  431 (433)
T ss_pred             HHHHHHHh
Confidence            99998643

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=1.6e-47  Score=358.83  Aligned_cols=363  Identities=23%  Similarity=0.369  Sum_probs=306.7

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +++|......+.++...+.. ++.+.++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|+.+++++.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~   85 (386)
T PRK09082          8 PQSKLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYG   85 (386)
T ss_pred             hhhHhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence            56677666666666665544 44789999999999888899999988877543 46798889999999999999998877


Q ss_pred             CC--CC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890           87 LY--KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        87 ~~--~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      .+  ++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+.+++.+|++++++.++.+ 
T Consensus        86 ~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~-  163 (386)
T PRK09082         86 RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRV-ALQPPDFRVDWQRFAAAISPR-  163 (386)
T ss_pred             CCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccccCCHHHHHHhcCcc-
Confidence            64  43 79999999999999999999999999999999999999999999999999 887667889999999999765 


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-ccc--c--cCCcEEEEcccccccCCCc
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCC--V--EGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~--~--~~~~~i~~~s~sK~~~~~G  236 (398)
                       ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.. ...  .  ..+++++++|+||.+|++|
T Consensus       164 -~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G  242 (386)
T PRK09082        164 -TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG  242 (386)
T ss_pred             -ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence             499999999999999999999999999999999999999999  6654422 111  1  2468999999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +|+||++++   +++++.+........++.+.+.|.++..+++..+.++++.++.++++++.+.+.|++.+. .+..+.+
T Consensus       243 ~RiG~iv~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~g  318 (386)
T PRK09082        243 WKVGYCVAP---AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRF-KLLPCEG  318 (386)
T ss_pred             hhhhhhhCC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCe
Confidence            999999999   889998888776667788999999999888744677888888899999999999988654 7777888


Q ss_pred             cEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       317 ~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ++|+|+++++ ...+..+++++|++++||.+.||+.|+.    .+++|++++. +++++++++++|++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~  385 (386)
T PRK09082        319 TYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ  385 (386)
T ss_pred             eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence            9999999874 2246788989888899999999997742    4789999997 78889999988864

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=6.7e-47  Score=356.19  Aligned_cols=352  Identities=28%  Similarity=0.432  Sum_probs=293.3

Q ss_pred             HHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHH
Q 015890           26 VRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ  100 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~  100 (398)
                      ..+|.++++|+.|.|   ++++++.+.+++.+.+... ...|++..|..++|+++++++++.++  +++++|++|+|+++
T Consensus        26 ~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~  104 (398)
T PRK08363         26 EKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE  104 (398)
T ss_pred             HhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence            346789999999998   6788999999998877653 35688889999999999999988765  57899999999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ++..++.+++++||+|+++.|+|..+...++..|.+++.+.+.+++++.+|++.+++.+++++  ++|++++|+||||.+
T Consensus       105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NPtG~~  182 (398)
T PRK08363        105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT--KAIAVINPNNPTGAL  182 (398)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce--EEEEEECCCCCCCcC
Confidence            999999999999999999999999999999999998887734556677889999999997654  999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEc--cCCcHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFAT  253 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~  253 (398)
                      ++.+++++|+++|+++|+++|+||+|  +.+.+....   .....++++++|+||.|+++|+|+||+++  +   +++++
T Consensus       183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~---~~~~~  259 (398)
T PRK08363        183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP---EGKLA  259 (398)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc---HHHHH
Confidence            99999999999999999999999999  555442221   11234789999999999999999999997  4   56666


Q ss_pred             HHHHhhc---cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC-CC
Q 015890          254 QLLKVQD---NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HL  329 (398)
Q Consensus       254 ~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~  329 (398)
                      .+.....   ...++.+.+.|.++..+|....+++++..+.++++++.+.+.|++++++.+..|.+++|+|+.++.. ..
T Consensus       260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~  339 (398)
T PRK08363        260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWK  339 (398)
T ss_pred             HHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCC
Confidence            6544322   1235788999999999997656788888999999999999999887666777788888999888752 12


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++.+++.++++++||.+.||+.|+.  ++++|++++. +++++++++++|++++++.
T Consensus       340 ~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~  395 (398)
T PRK08363        340 DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRER  395 (398)
T ss_pred             CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            4567777777899999999998864  5799999985 7899999999999888763

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=8.1e-47  Score=354.41  Aligned_cols=366  Identities=30%  Similarity=0.494  Sum_probs=302.3

Q ss_pred             hHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      ++|.....+..+++++++..    .+.+.++|+.|.++..+++.+.+++.+.+.......|++..|.+++|+++++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~   82 (386)
T PRK07550          3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR   82 (386)
T ss_pred             chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence            33444333445566555543    45689999999999888899999988876544456798889999999999999988


Q ss_pred             hcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890           84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (398)
Q Consensus        84 ~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~  160 (398)
                      .++  +++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.++
T Consensus        83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~~~  161 (386)
T PRK07550         83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYL-PCDEGPGLLPDPAAAEALIT  161 (386)
T ss_pred             HhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ecCCCcCCCCCHHHHHHHhc
Confidence            776  568899999999999999999999999999999999999999999999999999 8864 577889999999998


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc----cCCcEEEEcccccccC
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV----EGDHVVNLFSFSKAYG  233 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~----~~~~~i~~~s~sK~~~  233 (398)
                      .++  ++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.. ......    ..+++++++|+||.+|
T Consensus       162 ~~~--~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g  239 (386)
T PRK07550        162 PRT--RAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA  239 (386)
T ss_pred             ccC--cEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence            754  89889999999999999999999999999999999999999  44332 111111    1357899999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      ++|+|+||++++   +++++.+.........+++...|.++..+++..+++.++.++.++++++.+.+.|++.+.+.+ .
T Consensus       240 ~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~  315 (386)
T PRK07550        240 LTGHRVGAVVAS---PARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWEL-L  315 (386)
T ss_pred             CcccceEeeecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-C
Confidence            999999999998   788888887776666778899999999998764567778888889999999999988644343 3


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +.+++|+|+.++....+..+++.++++++||.+.||..|+.  .+++||+++..+++++++++++|.++
T Consensus       316 ~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        316 ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF  384 (386)
T ss_pred             CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence            56789999999752346788999888789999999998853  57999999977788999999999765

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-46  Score=353.86  Aligned_cols=371  Identities=25%  Similarity=0.426  Sum_probs=305.9

Q ss_pred             hhHhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      ||+++|....+...++++.+...    .|.++++|+.|.++.++++.+.+++.+....  ...|++..|..++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~~ia~~   78 (397)
T PRK07568          1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSHSQGIPELREAFAKY   78 (397)
T ss_pred             CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCCCCCCHHHHHHHHHH
Confidence            67888887767667777655432    3567999999999998899999998876543  56798889999999999999


Q ss_pred             Hhhhc-CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCC-CChHHHHH
Q 015890           81 LNQEN-KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLH-PDADWLEK  157 (398)
Q Consensus        81 l~~~~-~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~d~e~l~~  157 (398)
                      +.+.. ++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+ ++++. .+++.+++
T Consensus        79 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~~~~~~l~~  157 (397)
T PRK07568         79 YKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPV-TTKIEEGFHLPSKEEIEK  157 (397)
T ss_pred             HHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCCHHHHHH
Confidence            97432 4578899999999999999999999999999999999999998889999999998 775 34554 36799999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc--cCCcEEEEccccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV--EGDHVVNLFSFSK  230 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~--~~~~~i~~~s~sK  230 (398)
                      .+++++  ++|++++|+||||.+++.+++++|+++|+++|+++|+|++|  +.+++... +  ..  ..++++++.|+||
T Consensus       158 ~~~~~~--~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK  235 (397)
T PRK07568        158 LITPKT--KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSK  235 (397)
T ss_pred             hcCccc--eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchh
Confidence            987654  89999999999999999999999999999999999999999  65554321 1  11  1468899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      .||++|+|+||+++++  +++++.+..... ..++.+.+.|.++..+++..+.++++..+.++++++.+.+.|++++++.
T Consensus       236 ~~~~~G~R~G~~~~~~--~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  312 (397)
T PRK07568        236 RYSACGARIGCLISKN--KELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVV  312 (397)
T ss_pred             hccCCCcceEEEecCC--HHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            9999999999999864  677777655443 2467888999999999986567888888899999999999998876667


Q ss_pred             cccCCccEEEEeeCCCCCCChHHHHHHHHHh-----cCeEEecCCCCC-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +..|.+++|+|++++..  +..++..+++++     +||.+.||..|+     .++++|++++. +.+++++++++|.++
T Consensus       313 ~~~p~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~  389 (397)
T PRK07568        313 CEKPKGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEA  389 (397)
T ss_pred             ecCCCcceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence            77788889999999753  567888888754     699999998773     24699999986 689999999999999


Q ss_pred             HHHHhc
Q 015890          381 LEELVK  386 (398)
Q Consensus       381 ~~~~~~  386 (398)
                      +++..+
T Consensus       390 l~~~~~  395 (397)
T PRK07568        390 LEKYNK  395 (397)
T ss_pred             HHHhhc
Confidence            987653

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=7.1e-47  Score=362.89  Aligned_cols=354  Identities=24%  Similarity=0.377  Sum_probs=286.7

Q ss_pred             cCCCeEEcCCccCC----------------CCC-------------cHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHH
Q 015890           28 GAKNAVSLAQGVVY----------------WQP-------------PKMAMEKVKELVWDP--SISKYGADEGLPELRDA   76 (398)
Q Consensus        28 ~g~~~~~l~~g~~~----------------~~~-------------~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~   76 (398)
                      .|.++|+|+.|.|.                +..             |..+++++.+.+...  ....|++..|..++|++
T Consensus        44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a  123 (481)
T PTZ00377         44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA  123 (481)
T ss_pred             CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence            45899999999995                544             447788877655432  35679999999999999


Q ss_pred             HHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCCh
Q 015890           77 LVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDA  152 (398)
Q Consensus        77 l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~  152 (398)
                      +++++.+.+|  +++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..|.+++.+ +.++ ++|.+|+
T Consensus       124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v-~~~~~~~~~~d~  202 (481)
T PTZ00377        124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPY-YLDEEKGWSLDQ  202 (481)
T ss_pred             HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEE-EeccccCCCCCH
Confidence            9999988765  468899999999999999999998 799999999999999999999999999999 8764 5788999


Q ss_pred             HHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Ccccc-------cc
Q 015890          153 DWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCC-------VE  218 (398)
Q Consensus       153 e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~-------~~  218 (398)
                      +.|++.+++    ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|++ .+...       ..
T Consensus       203 ~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~  282 (481)
T PTZ00377        203 EELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELP  282 (481)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhc
Confidence            999999864    113599999999999999999999999999999999999999999  66642 22111       11


Q ss_pred             C-----CcEEEEcccccc-cCCCcceeEEEEc---cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---Cc----
Q 015890          219 G-----DHVVNLFSFSKA-YGMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GP----  282 (398)
Q Consensus       219 ~-----~~~i~~~s~sK~-~~~~G~r~G~i~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~----  282 (398)
                      .     .++++++|+||. ++++|+|+||+++   +   +++++.+..... ...+.+.+.|.++..+++.   .+    
T Consensus       283 ~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p---~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~  358 (481)
T PTZ00377        283 AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP---PEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYP  358 (481)
T ss_pred             ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC---HHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHH
Confidence            1     258999999997 5889999999986   6   788888887664 3457889999999999963   11    


Q ss_pred             hHH---HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC--CCC---------CChHHHHHHHHHhcCeEEec
Q 015890          283 EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--EKH---------LDDFEVVRWLAHRHGVVVIP  348 (398)
Q Consensus       283 ~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~ll~~~gi~v~~  348 (398)
                      .+.   ++..+.++++++.+.+.|++++++.+..|++++|+|++++  ...         .++.+++..+++++||.+.|
T Consensus       359 ~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p  438 (481)
T PTZ00377        359 LYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVP  438 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeC
Confidence            132   3333456788899999999886678888998999997764  111         12445667788899999999


Q ss_pred             CCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          349 GGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       349 g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      |+.|+.   ++++|+|++ .+++++++++++|.++++++.++
T Consensus       439 G~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~~  479 (481)
T PTZ00377        439 GSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMKK  479 (481)
T ss_pred             CcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence            999863   469999999 58889999999999999887654

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=9.3e-47  Score=355.58  Aligned_cols=350  Identities=18%  Similarity=0.246  Sum_probs=290.2

Q ss_pred             CCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHHHH
Q 015890           29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        29 g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a~~  103 (398)
                      ++++++|+.|.++    +++++.+.+++.+.+.......|++..|..++|+++++++.+.. .+++++|++|+|+++++.
T Consensus        30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~  109 (401)
T TIGR01264        30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIE  109 (401)
T ss_pred             CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHH
Confidence            5789999999984    67899999999888766445679889999999999999997643 256889999999999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~  182 (398)
                      .++.+++++||+|+++.|+|..+...++..|++++.+ +.+.+ ++.+|++.+++.++.++  +++++++|+||||.+++
T Consensus       110 ~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~  186 (401)
T TIGR01264       110 MCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLY-NLLPDKSWEIDLKQLESLIDEKT--AALIVNNPSNPCGSVFS  186 (401)
T ss_pred             HHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHHHhccCc--eEEEEcCCCCCCCCCCC
Confidence            9999999999999999999999999999999999988 76543 57889999999887654  89999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc-CCcEEEEcccccccCCCcceeEEEEccCC---cHHHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSE---VEGFAT  253 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~---~~~~~~  253 (398)
                      .+++++|+++|+++|+++|+||+|  +.+++.....   .. ..++++++|+||.|+++|+|+||+++++.   ..++++
T Consensus       187 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~  266 (401)
T TIGR01264       187 RQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRD  266 (401)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHH
Confidence            999999999999999999999999  6665432111   11 23589999999999999999999998741   113444


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC----C
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK----H  328 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~  328 (398)
                      .+..... ..++.+.+.|.++..+|.. .++++++.++.++++++.+.+.|+.++++.+..|.+++|+|++++..    .
T Consensus       267 ~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~  345 (401)
T TIGR01264       267 GLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEF  345 (401)
T ss_pred             HHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCC
Confidence            4444432 2456788999999999975 34788888999999999999999988555666788899999997531    1


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+..+++.++++++||.+.||+.|+.++++||+++. +++++++++++|.+++++
T Consensus       346 ~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~rl~~~~~~  399 (401)
T TIGR01264       346 KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEACSRIQEFCER  399 (401)
T ss_pred             CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHhc
Confidence            246788888877899999999988878999999996 688999999999988764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-46  Score=350.35  Aligned_cols=331  Identities=20%  Similarity=0.249  Sum_probs=276.4

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~  106 (398)
                      |+++++|+.|.|++++++.+.+++.+....  ...|++..|..++|+++++++++.++  +++++|++|+|+++++..++
T Consensus        23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~  100 (374)
T PRK05839         23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFP  100 (374)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            779999999999998899999988876533  67798888999999999999988876  67899999999999999998


Q ss_pred             HHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          107 LTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       107 ~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      .+++  ++||.|+++.|+|+.+...++..|++++.+ +.+ ++++.+|++..+  + ++  +++|++++||||||.+++.
T Consensus       101 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~~~--~-~~--~k~v~i~nP~NPTG~~~s~  174 (374)
T PRK05839        101 QFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLM-PLTKENDFTPSLNEKE--L-QE--VDLVILNSPNNPTGRTLSL  174 (374)
T ss_pred             HHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEe-ecccccCCcCCcchhh--h-cc--ccEEEEeCCCCCcCcccCH
Confidence            8874  578999999999999999999999999999 876 346777755432  2 22  5999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +++++|+++|+++|+++|+||+|  +.++......         ...+++++++|+||.|++||+|+||++++   ++++
T Consensus       175 ~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---~~~~  251 (374)
T PRK05839        175 EELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---ASIL  251 (374)
T ss_pred             HHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC---HHHH
Confidence            99999999999999999999999  4332221111         12368999999999999999999999998   7888


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +.+.........+.+.+.|.++..++.. ++++++.++.+.++++.+.+.|.   . .  .|++++|+|++++    +..
T Consensus       252 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~---~-~--~p~gg~fi~~~~~----~~~  320 (374)
T PRK05839        252 KKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILG---I-T--IPPATFYVWLPVD----NDE  320 (374)
T ss_pred             HHHHHHHhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcC---C-C--CCCeeEEEEEeCC----ChH
Confidence            8887776555667888889888877764 67788888888888888887763   2 2  5678999999996    356


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +++.++++++||.+.||..|+.    ++++|||++. +.+++.+++++|.++++
T Consensus       321 ~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        321 EFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE  373 (374)
T ss_pred             HHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence            8888887679999999987753    5899999986 78999999999988764

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.6e-46  Score=323.82  Aligned_cols=352  Identities=22%  Similarity=0.293  Sum_probs=309.3

Q ss_pred             CCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEecChHHHHH
Q 015890           30 KNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        30 ~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~g~t~a~~  103 (398)
                      +.++.++.|+|.    +++.+++.+|+..++..+...+|.|+.|....|+++++|+.+..  .+++++|++|+|.++|++
T Consensus        61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe  140 (447)
T KOG0259|consen   61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE  140 (447)
T ss_pred             ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence            579999999864    45889999999999998888999999999999999999987765  367899999999999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      .++.+|.++|.+||+|.|+|+-|...++-.|+++.++.-.++.+|.+|++.+|.+++++|  .++++.||+||+|.+++.
T Consensus       141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT--~AivviNP~NPcGnVys~  218 (447)
T KOG0259|consen  141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT--VAIVVINPNNPCGNVYSE  218 (447)
T ss_pred             HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCe--eEEEEeCCCCCCcccccH
Confidence            999999999999999999999999999999999999956678899999999999999998  999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccccCCCcceeEEEEccCC-----cHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGFA  252 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~-----~~~~~  252 (398)
                      +.|++|++.|+++|+.+|.||+|  +.|++.++.+..    --.++.++|.||.|=.||||+||++..+.     ....+
T Consensus       219 ~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~  298 (447)
T KOG0259|consen  219 DHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV  298 (447)
T ss_pred             HHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence            99999999999999999999999  777776554332    23478899999999889999999988762     13344


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCC----
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE----  326 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~----  326 (398)
                      +.+....+ ...+++...|.|+-..|+. .++++.+....+..+.+...+.|+++|+.. ...|++.+|+|+.+.-    
T Consensus       299 q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~  377 (447)
T KOG0259|consen  299 QGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFP  377 (447)
T ss_pred             HHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhc
Confidence            55555554 3567789999999999987 347789999999999999999999999988 6789999999998853    


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ...++.+|+.+|.++..+.+.||..|+.++|+|++++. ..+.+++++++|+.+...-.
T Consensus       378 ~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~  435 (447)
T KOG0259|consen  378 DIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHS  435 (447)
T ss_pred             cccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhh
Confidence            24678999999999999999999999999999999996 78899999999999987655

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.6e-46  Score=347.65  Aligned_cols=335  Identities=24%  Similarity=0.362  Sum_probs=285.6

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC-cEEEecChHHHHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~g~t~a~~~~~~~  108 (398)
                      +++|+.|.+++++++.+.+++.+....  ...|++..|..++|+++++++.+.+|  ++++ +|++|+|++++++.++.+
T Consensus         2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~   79 (350)
T TIGR03537         2 LFDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLV   79 (350)
T ss_pred             eEeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHH
Confidence            679999999998899999999887643  66798888999999999999988876  4576 899999999999999999


Q ss_pred             hccCC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          109 LCDAG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       109 l~~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      ++++|   |+|+++.|+|+.+...++..|++++.+ +.+ ++++.+|++.+++++++++  +++++++|+||||.+++.+
T Consensus        80 ~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~p~NPtG~~~~~~  156 (350)
T TIGR03537        80 FIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAV-KLKKEDGFLLRLEKVEKSILEET--KIVWINYPHNPTGATAPRS  156 (350)
T ss_pred             HcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEc-ccCcccCCccCHHHHHHhhhhcc--EEEEEeCCCCCcCcccCHH
Confidence            99877   699999999999999999999999999 886 5678899999999988754  9999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      ++++|+++|+++|+++|+||+|  +.++.....  ....+++++++|+||.+|++|+|+||++.+   +++++.+.....
T Consensus       157 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~  233 (350)
T TIGR03537       157 YLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD---EKLISFLRKLRA  233 (350)
T ss_pred             HHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC---HHHHHHHHHHHH
Confidence            9999999999999999999999  444432221  123568999999999999999999999988   788888887766


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH  340 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  340 (398)
                      ....+.+...+.++..++.. +.+.++.++.++++++.+.+.|++.+. .+..+.+++|+|++++.. .+..++++.|+ 
T Consensus       234 ~~~~~~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~~~~-~~~~~l~~~L~-  309 (350)
T TIGR03537       234 NFGVASPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKVPSG-IDAKDYALRLL-  309 (350)
T ss_pred             hhccCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEECCCC-CCHHHHHHHHH-
Confidence            55666666778887777764 567788888899999999999988765 777788889999999864 35778888886 


Q ss_pred             hcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          341 RHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       341 ~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ++||.+.||..|+.  ++++|++++ .+++++++++++|++
T Consensus       310 ~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       310 ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER  349 (350)
T ss_pred             HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence            68999999998854  589999998 578899999988875

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=4.5e-46  Score=349.47  Aligned_cols=362  Identities=25%  Similarity=0.380  Sum_probs=301.1

Q ss_pred             HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-
Q 015890           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-   88 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-   88 (398)
                      |+.....+.++++.+...+ .+.++|+.|.++...|+.+.+++.+.+... ...|++..|..++|+++++++.+.++.+ 
T Consensus         5 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~   82 (387)
T PRK07777          5 RLRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEY   82 (387)
T ss_pred             hhhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4444555667777666654 589999999988877888888888777653 4679888999999999999998877654 


Q ss_pred             -CC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCC
Q 015890           89 -KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPT  164 (398)
Q Consensus        89 -~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~  164 (398)
                       ++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.+++  ++.+|++++++.++++  
T Consensus        83 ~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~--  159 (387)
T PRK07777         83 DPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPV-PLVPDGRGFALDLDALRAAVTPR--  159 (387)
T ss_pred             CCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEe-ecCCccCCCcCCHHHHHHhcCcc--
Confidence             54 79999999999999999999999999999999999999999999999888 77654  4678999999998765  


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc----cCCcEEEEcccccccCCCcc
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV----EGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~----~~~~~i~~~s~sK~~~~~G~  237 (398)
                      +++|++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+.+... ...    ..+++++++|+||.||++|+
T Consensus       160 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  239 (387)
T PRK07777        160 TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW  239 (387)
T ss_pred             cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc
Confidence            499999999999999999999999999999999999999999  55544321 111    14578999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+........++.+.+.|.++..++.....++++..+.+.++++.+.+.|++.+. ++..++++
T Consensus       240 RiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~  315 (387)
T PRK07777        240 KIGWACGP---APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGF-EVHDSAGT  315 (387)
T ss_pred             eeEEEecC---HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCC-CccCCCcc
Confidence            99999999   788888877666556677888888888888765678888889999999999999988754 77778888


Q ss_pred             EEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       318 ~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      +|+|++++. ...++.+++++|++++||.+.||..|+.     ++++|++++. +++++++++++|.++.
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        316 YFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR  384 (387)
T ss_pred             eEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence            999998753 2236788999998788999999997753     4589999997 7899999999998654

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-46  Score=325.78  Aligned_cols=349  Identities=24%  Similarity=0.367  Sum_probs=307.9

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~  105 (398)
                      ++.+++.|.+.+++++.||++++|+.+.++++ .++|+  .+..++.+++.+|.+++++  +.++.|++++|..-++..+
T Consensus        23 g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~   99 (388)
T COG1168          23 GNEDVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLA   99 (388)
T ss_pred             CCCCcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHH
Confidence            55899999999999999999999999999885 57785  6668899999999999986  4578899999999999999


Q ss_pred             HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      ++.++++||.|++..|.|+++....+..|.+++.. |..  ...+.+|+++||+.+.+.. ++++++||||||||.+++.
T Consensus       100 I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~-pL~~~~~~y~iD~~~LE~~~~~~~-vkl~iLCnPHNP~Grvwt~  177 (388)
T COG1168         100 IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIEN-PLVEDDGRYEIDFDALEKAFVDER-VKLFILCNPHNPTGRVWTK  177 (388)
T ss_pred             HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEec-cccccCCcEEecHHHHHHHHhcCC-ccEEEEeCCCCCCCccccH
Confidence            99999999999999999999999999999999988 654  3347789999999998765 7999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCccccc------cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      |+|++|.++|.+||+++|.||.|  +.+.|.++...      ..++.+.+.|.||+|+++|+.+++++.++  +++.+++
T Consensus       178 eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n--~~lr~~~  255 (388)
T COG1168         178 EELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN--RELRAKF  255 (388)
T ss_pred             HHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC--HHHHHHH
Confidence            99999999999999999999999  76666433221      13778999999999999999999998887  6664443


Q ss_pred             -HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          256 -LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       256 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                       ..+......++|.++..|..++.+.+.+|+.+..+.++.+++.+.+.+.+ +|.+++..|++++..|+++.+...++.+
T Consensus       256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~  335 (388)
T COG1168         256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE  335 (388)
T ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence             34444556778999999999999999999999999999999999999987 6788999999999999999987778889


Q ss_pred             HHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.++++++.+|.+.+|..|+  +.+++|++++. +...+++++++|+.+++..
T Consensus       336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~  387 (388)
T COG1168         336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR  387 (388)
T ss_pred             HHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999997  45799999996 8899999999999888753

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.4e-46  Score=357.93  Aligned_cols=349  Identities=21%  Similarity=0.320  Sum_probs=284.2

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhc-----C------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEE
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-----D------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV   94 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~-----~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~   94 (398)
                      .++|+|+.+.|++.. +.+.+.+.....     .      .....|++..|.+++|+++++++.+.++    +++++|++
T Consensus        38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii  116 (468)
T PLN02450         38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL  116 (468)
T ss_pred             CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence            469999999998864 555555554321     0      1244587788999999999999987654    57899999


Q ss_pred             ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCC-CCCCCCChHHHHHhhcc----CCCCeEE
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKLV  168 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~----~~~~~~v  168 (398)
                      |+|+++++..++.+++++||.|+++.|+|+.+...++ ..|++++.+ +.+ ++++.+|++.+++.++.    ..++++|
T Consensus       117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v  195 (468)
T PLN02450        117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI-HCSSSNGFQITESALEEAYQQAQKLNLKVKGV  195 (468)
T ss_pred             ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE-ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            9999999999999999999999999999999988777 589999999 765 56788899999988864    2236999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc------------ccCCcEEEEcccccccC
Q 015890          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC------------VEGDHVVNLFSFSKAYG  233 (398)
Q Consensus       169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~------------~~~~~~i~~~s~sK~~~  233 (398)
                      ++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|++.+. +.            ...+++++++|+||.|+
T Consensus       196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~  275 (468)
T PLN02450        196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG  275 (468)
T ss_pred             EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence            99999999999999999999999999999999999999  55654321 10            12468999999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      ++|+|+||+++++  +.+++.+.....  ..+.+.+.|.++..+|++..   .++++.++.++++++.+.+.|++++. .
T Consensus       276 l~GlRiG~li~~~--~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi-~  350 (468)
T PLN02450        276 LPGFRVGAIYSND--EMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGI-K  350 (468)
T ss_pred             CCCccEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-c
Confidence            9999999999984  445665554432  23468899999999998742   36778888999999999999998864 7


Q ss_pred             cccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +..+.+++|+|+++++...     +..+++.++++++||.+.||+.|+.  ++++||+++..+++++++++++|++++..
T Consensus       351 ~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~  430 (468)
T PLN02450        351 CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES  430 (468)
T ss_pred             ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence            7788889999999974321     2345777888789999999998863  68999999976789999999999999876


Q ss_pred             Hh
Q 015890          384 LV  385 (398)
Q Consensus       384 ~~  385 (398)
                      ..
T Consensus       431 ~~  432 (468)
T PLN02450        431 DS  432 (468)
T ss_pred             cc
Confidence            55

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=1.6e-45  Score=346.98  Aligned_cols=356  Identities=22%  Similarity=0.309  Sum_probs=293.1

Q ss_pred             HHHHHHcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEe
Q 015890           22 IQELVRGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVT   95 (398)
Q Consensus        22 ~~~~~~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~   95 (398)
                      +.+....|.++++|+.|.|.    +++++.+.+++.+.+.......|++..|..++|+++++++....+  +++++|++|
T Consensus        23 ~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t  102 (403)
T TIGR01265        23 LKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLT  102 (403)
T ss_pred             HHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEe
Confidence            33334457899999999874    678899999999888765456798889999999999999987554  467899999


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~  174 (398)
                      +|+++++..++.+++++||+|+++.|+|..+...++..|++++.+ +.+. +++.+|++.+++.+++++  +++++++|+
T Consensus       103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~i~~p~  179 (403)
T TIGR01265       103 SGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY-DLLPEKDWEIDLDGLEALADEKT--VAIVVINPS  179 (403)
T ss_pred             cChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-cCCcccCCccCHHHHHHHhCcCc--cEEEEecCC
Confidence            999999999999999999999999999999999999999999988 6643 456789999999987665  899999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--c-ccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--C-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~-~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      ||||.+++.+++++|+++|+++|+++|+|++|  +.+++... .  . ....++++++|+||.|++||+|+||+++++. 
T Consensus       180 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~-  258 (403)
T TIGR01265       180 NPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDP-  258 (403)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCc-
Confidence            99999999999999999999999999999999  65554321 1  1 1234689999999999999999999988531 


Q ss_pred             HH-----HHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890          249 EG-----FATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  322 (398)
Q Consensus       249 ~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  322 (398)
                      ++     +++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+.++++.+..|.+++|+|+
T Consensus       259 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~  337 (403)
T TIGR01265       259 HGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMV  337 (403)
T ss_pred             hhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEE
Confidence            12     3444443332 2356788999999999975 347788889999999999999998875556667888999999


Q ss_pred             eCCCCC----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       323 ~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++...    .+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.+++++
T Consensus       338 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~  401 (403)
T TIGR01265       338 KLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEACSRIKEFCER  401 (403)
T ss_pred             eccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence            997531    256788888878899999999999888999999996 678899999999988865

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=1.8e-45  Score=346.04  Aligned_cols=350  Identities=23%  Similarity=0.395  Sum_probs=293.3

Q ss_pred             HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEEecChHHHH
Q 015890           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQAF  102 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~~~g~t~a~  102 (398)
                      .+.+.++++|+.|.+...+++.+.+++.+.+.......|++..|..++|+++++++.+.++.  +++ ++++|+|+++++
T Consensus        25 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l  104 (395)
T PRK08175         25 RRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL  104 (395)
T ss_pred             HhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence            34578899999999888778888888888775545678988899999999999999887654  565 799999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~  181 (398)
                      ..++..++++||+|+++.|+|+.+...++..|++++.+ +.++++.  +.++++++++.. ..++++++++|+||||.++
T Consensus       105 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~  181 (395)
T PRK08175        105 AHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV-PLVEGVD--FFNELERAIRESYPKPKMMILGFPSNPTAQCV  181 (395)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEE-ecccCCC--cHHHHHHHHhhccCCceEEEEeCCCCCCCCCC
Confidence            99999999999999999999999998889999999999 8775542  478888888632 2368999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      +.+++++|+++|+++|+++|+||+|  +.+++.....   .  ..+.+++++|+||.||+||+|+||++.+   +++++.
T Consensus       182 ~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~---~~l~~~  258 (395)
T PRK08175        182 ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN---PELVSA  258 (395)
T ss_pred             CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC---HHHHHH
Confidence            9999999999999999999999999  5655432111   1  1356788999999999999999999998   889998


Q ss_pred             HHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC--CChH
Q 015890          255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH--LDDF  332 (398)
Q Consensus       255 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  332 (398)
                      +........++.+.+.|.++..++...+.++++.++.++++++.+.+.|++++. .+..+.+++|+|++++...  .+..
T Consensus       259 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~~g~~i~i~l~~~~~~~~~~  337 (395)
T PRK08175        259 LARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGW-MVEMPKASMYVWAKIPEPYAAMGSL  337 (395)
T ss_pred             HHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccCCCEEEEEEEECCcccCCCCHH
Confidence            887776566777888898888888755567888888999999999999998864 6677778999999998643  2467


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++.++++++||.+.||..|+.  ++++||+++. +++.+.+++++|.+++++
T Consensus       338 ~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~  389 (395)
T PRK08175        338 EFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA  389 (395)
T ss_pred             HHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence            8888887789999999988753  4699999984 789999999999988864

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=6.9e-45  Score=343.01  Aligned_cols=356  Identities=22%  Similarity=0.338  Sum_probs=283.4

Q ss_pred             HHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEe
Q 015890           21 QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVT   95 (398)
Q Consensus        21 ~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~   95 (398)
                      ...+...+|+++++|+.|.+   ++++++.+.+++.+.+..  ...|++..|..++|+++++++.+..  ++++++|+++
T Consensus        24 ~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t  101 (404)
T PRK09265         24 EAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIG  101 (404)
T ss_pred             HHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEe
Confidence            34444557889999999987   456889999998887654  4679888999999999999997654  4678999999


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCC
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG  174 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~  174 (398)
                      +|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.+. +++.+|++.+++.++.++  ++|++++|+
T Consensus       102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~  178 (404)
T PRK09265        102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHY-LCDEEAGWFPDLDDIRSKITPRT--KAIVIINPN  178 (404)
T ss_pred             CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhccccc--eEEEEECCC
Confidence            999999999999999999999999999999999999999998888 6653 467789999999987654  999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc-cCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      ||||.+++.+++++|+++|+++|+++|+||+|  +.+++... .  .. ...++++++|+||.+|+||+|+||++.+.. 
T Consensus       179 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~-  257 (404)
T PRK09265        179 NPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGP-  257 (404)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCc-
Confidence            99999999999999999999999999999999  66554321 1  11 123578899999999999999999996321 


Q ss_pred             HH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890          249 EG----FATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  322 (398)
Q Consensus       249 ~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  322 (398)
                      +.    +++.+... .....+.+.+.|.++..+|...+.  ...+..+.+.++++.+.+.|+.++++.+..|.+++|+|+
T Consensus       258 ~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~  336 (404)
T PRK09265        258 KKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFP  336 (404)
T ss_pred             hHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEE
Confidence            33    34444322 223467788999999999964222  122223456777888899998876667788888999999


Q ss_pred             eCCCCC---CChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKH---LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       323 ~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++...   .++.+++.+++.++||.+.||..|+  .++++|++++ .+++++++++++|.++++..
T Consensus       337 ~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~~~  402 (404)
T PRK09265        337 KLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFLSGY  402 (404)
T ss_pred             EecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence            987431   2345556667779999999999885  3679999997 48899999999999988754

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=9.3e-46  Score=351.64  Aligned_cols=336  Identities=20%  Similarity=0.222  Sum_probs=281.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      ...++|+.|.++.+++|.+.+++.+....  ...|++..|..++|+.+++++++..+ .+++|++|+|+++++..++.++
T Consensus        85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l  161 (431)
T PRK15481         85 TPLHDLAGGNPDPQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAH  161 (431)
T ss_pred             chhhhhhcCCCChhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHh
Confidence            45788998987777667777777765443  45798888999999999999875432 3568999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~  188 (398)
                      +++||.|++++|+|+.+...++..|++++.+ +.++++  +|+|.++++++.+  +++++++ +||||||.+++.+++++
T Consensus       162 ~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~g--~~~~~l~~~~~~~--~k~i~~~p~p~NPTG~~~s~~~~~~  236 (431)
T PRK15481        162 LLPGDSVAVEDPCFLSSINMLRYAGFSASPV-SVDAEG--MQPEKLERALAQG--ARAVILTPRAHNPTGCSLSARRAAA  236 (431)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHcCCeEEee-ccCCCC--CCHHHHHHHHhcC--CCEEEECCCCCCCCCccCCHHHHHH
Confidence            9999999999999999999999999999999 887665  6899999999764  4888887 99999999999999999


Q ss_pred             HHHHHHHc-CCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          189 ISDLCKAA-GSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       189 i~~l~~~~-~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      |.++|+++ ++++|+||+|  +.+.+... .....+++++++||||.|+ ||+|+||++.+   +++++.+.........
T Consensus       237 l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~---~~~~~~~~~~~~~~~~  312 (431)
T PRK15481        237 LRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD---SATSARLRLRLNSGTQ  312 (431)
T ss_pred             HHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC---HHHHHHHHHHHhcccc
Confidence            99999999 9999999999  54433211 1123468999999999999 99999999999   7888888766554456


Q ss_pred             CcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          265 CASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +.+.+.|.++..+|+.+.  .++++.++.++++++.+.+.|++.+. .+..|.+++|+|++++.   +..++++.++ ++
T Consensus       313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~-~~~~p~gg~f~~~~l~~---~~~~~~~~l~-~~  387 (431)
T PRK15481        313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGI-AIPSPGDGLNLWLPLDT---DSQATALTLA-KS  387 (431)
T ss_pred             CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccccCCCeEEEEEECCC---CHHHHHHHHH-HC
Confidence            689999999999998743  46788889999999999999988754 66678889999999974   3567888775 79


Q ss_pred             CeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       343 gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ||.+.||..|+.   .+++||+++..+++++++++++|++++.
T Consensus       388 gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        388 GWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             CcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence            999999998853   3589999998788999999999998764

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=3.9e-45  Score=340.35  Aligned_cols=347  Identities=23%  Similarity=0.376  Sum_probs=286.3

Q ss_pred             hhHhHHhhccCchHHHHHHHHH-HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            5 AKLAKRALETEMPIMVQIQELV-RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      |++++|++...+..+..+-+.. ..+.+.++|+.|.+..+.++.+.+++.+...   ...|++..|.+++|+++++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~   77 (364)
T PRK07865          1 MPVSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLAR   77 (364)
T ss_pred             CCccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHH
Confidence            7789999998887777775444 5567899999998777778888888876543   24798888999999999999988


Q ss_pred             hcC---CCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890           84 ENK---LYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        84 ~~~---~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      .++   +++++|++|+|+++++..++..+ +++||.|+++.|+|+.+...++..|++++.+ +.        +++++.  
T Consensus        78 ~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~--------~~~l~~--  146 (364)
T PRK07865         78 RRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRA-DS--------LTELGP--  146 (364)
T ss_pred             HcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEec-CC--------hhhCCc--
Confidence            765   55899999999999999988888 7999999999999999999999999998877 31        222222  


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-------cCCcEEEEccccc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSK  230 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-------~~~~~i~~~s~sK  230 (398)
                       .+  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++......       ..+++++++|+||
T Consensus       147 -~~--~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  223 (364)
T PRK07865        147 -QR--PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSK  223 (364)
T ss_pred             -cc--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechh
Confidence             22  599999999999999999999999999999999999999999  55544222211       2357899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      .||++|+|+||++++   +++++.+........++.+.+.|.++..+++. .++.++.++.+.++++.+.+.|++.+. .
T Consensus       224 ~~~~~GlRiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~  298 (364)
T PRK07865        224 QSNLAGYRAGFVAGD---PALVAELLEVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEAAGF-R  298 (364)
T ss_pred             ccCCCceeeEEEecC---HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHcCC-c
Confidence            999999999999998   88888888776656678889999999999975 567778888889999999999988764 6


Q ss_pred             cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      +..+++++|+|+.++.   +..++...+ .++||.+.||..|+  .++++||+++. +++++++++++|+
T Consensus       299 ~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~  363 (364)
T PRK07865        299 VDHSEAGLYLWATRGE---DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA  363 (364)
T ss_pred             ccCCCccEEEEEeCCC---CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence            7778888999998742   355666655 58999999998775  36799999986 6899999998875

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=4e-45  Score=344.99  Aligned_cols=336  Identities=24%  Similarity=0.400  Sum_probs=272.9

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhc--CCCCCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~~~~v~~~~g~t~a~  102 (398)
                      +.++++|+.|.+++++++.+.+++.+.+.+.    ....|++..|.+++|+++++++.+.+  ++++++|++|+|+++++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al  112 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT  112 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence            5679999999999999999999988877641    35679889999999999999987766  46789999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-----------EEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEE
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-----------HILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSV  170 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i  170 (398)
                      ..+. .++++||+|++++|+|+.+...++..|.+           ++.+ +.++ +++.+|.+.      +  .+++|++
T Consensus       113 ~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~d~~~------~--~~k~i~l  182 (409)
T PRK07590        113 GNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL-PCTAENNFVPELPE------E--KVDIIYL  182 (409)
T ss_pred             HHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe-ecccccCCcccCcc------c--CceEEEE
Confidence            9865 55689999999999999999999999986           8888 7763 355555321      2  2699999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--cc--CCcEEEEcccccccCCCcceeEEEE
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VE--GDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~--~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      ++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ..  ..  .+++++++|+||.||+||+|+||++
T Consensus       183 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i  262 (409)
T PRK07590        183 CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTV  262 (409)
T ss_pred             eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEE
Confidence            999999999999999999999999999999999999  55544221 11  11  2468999999999999999999999


Q ss_pred             ccCCcHHHHHHH------------HHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          244 YPSEVEGFATQL------------LKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       244 ~~~~~~~~~~~l------------~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      ++   +++++.+            .........+.+.+.|.++..++.. ...++++.++.++++++.+.+.|+..+ ..
T Consensus       263 ~~---~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~  338 (409)
T PRK07590        263 VP---KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FE  338 (409)
T ss_pred             cC---HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence            99   7777621            1111111235788899998888874 346788888899999999999999876 46


Q ss_pred             cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +..+.+++|+|++++.. .+..+++.++++++||.+.||+.|+.  .+++||++.. +++++++++++|.++
T Consensus       339 ~~~~~g~~f~wi~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~  408 (409)
T PRK07590        339 VYGGVNAPYIWVKTPDG-MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENVLEAMERIKKA  408 (409)
T ss_pred             eecCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHHHHHHHHHHhh
Confidence            77777899999999864 35678888888788999999998864  4699999764 789999999999865

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.8e-45  Score=334.79  Aligned_cols=330  Identities=25%  Similarity=0.394  Sum_probs=284.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.+.+++++||.+.+++.+.+..  .+.| |+....+++++++++++   ..++++|++++|+++.+..+++++
T Consensus        22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~---~~~~~~V~~gnGsde~i~~l~~~~   95 (356)
T COG0079          22 PGIIKLSSNENPYGPPPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYG---VVDPENVLVGNGSDELIELLVRAF   95 (356)
T ss_pred             ccceeecCCCCCCCCCHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhC---CCCcceEEEcCChHHHHHHHHHHh
Confidence            36999999999999999999999988774  6778 55578899999999883   177899999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +.+||+|+++.|+|..|...++..|.+++.+ +..+  +.+|++.+.+.+.++  +++|++++||||||..++.++++++
T Consensus        96 ~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v-~~~~--~~~d~~~~~~~~~~~--~~lv~i~nPNNPTG~~~~~~~l~~l  170 (356)
T COG0079          96 VEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV-PLKE--FRLDLDAILAAIRDK--TKLVFLCNPNNPTGTLLPREELRAL  170 (356)
T ss_pred             hcCCCEEEEcCCChHHHHHHHHhcCCeEEEe-cccc--cccCHHHHHHhhhcC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999 7765  788999999999874  5999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEeeceeccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890          190 SDLCKAAGSWLVVDNTYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  267 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  267 (398)
                      ++.+.+ +.++|+||+|..|.+.....  ..++++++++||||+||++|+|+||++++   +++++.+++.+.  +|+.|
T Consensus       171 ~~~~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~---~~~i~~l~~vr~--p~~v~  244 (356)
T COG0079         171 LEALPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN---PELIAALNKVRP--PFNVS  244 (356)
T ss_pred             HHhCCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC---HHHHHHHHHhcC--CCCCC
Confidence            999888 99999999994444422111  14677999999999999999999999999   899999999987  88899


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  347 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  347 (398)
                      .+++.++.++++. .+++++..+.+...++++.+.|++++...++++. +||++++++. .. ...+.+.|+ ++||.++
T Consensus       245 ~~a~~aa~aal~~-~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~-aNFvlv~~~~-~~-~~~l~~~L~-~~giivR  319 (356)
T COG0079         245 SPALAAAIAALRD-ADYLEESVERIREERERLYAALKALGLFGVFPSQ-ANFVLVRVPD-AE-AAALAEALL-KKGILVR  319 (356)
T ss_pred             HHHHHHHHHHccc-HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-CcEEEEECCC-cc-HHHHHHHHH-HCCEEEE
Confidence            9999999999997 5889999999999999999999999842366565 9999999986 22 456777775 7899999


Q ss_pred             cCCCC-CCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          348 PGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       348 ~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..... ..++++||+++.  .++.++++++|.+++..
T Consensus       320 ~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~  354 (356)
T COG0079         320 DCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG  354 (356)
T ss_pred             eCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence            98652 346799999995  66678888888877653

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-44  Score=338.35  Aligned_cols=356  Identities=21%  Similarity=0.324  Sum_probs=291.2

Q ss_pred             HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecC
Q 015890           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG   97 (398)
Q Consensus        18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g   97 (398)
                      .+........++.++++|+.|.+.+++++.+.+++.+.+.......|++..|..++|+.+++++    ++++++|++++|
T Consensus        16 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g   91 (380)
T PRK06225         16 TSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----GLDDDEALITAG   91 (380)
T ss_pred             hHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCC
Confidence            3344333444567899999999999999999999999887655567877889999999999987    678889999999


Q ss_pred             hHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890           98 ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus        98 ~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      +++++..++.+++.+||+|++++|+|..+...++..|.+++.+ +++  ++++.+|++.+++.+++++  +++++++|+|
T Consensus        92 ~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~N  168 (380)
T PRK06225         92 ATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEV-PIYSEECNYKLTPELVKENMDENT--RLIYLIDPLN  168 (380)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEee-ccccccCCccCCHHHHHhhcCCCc--eEEEEeCCCC
Confidence            9999999999999999999999999999888889999999988 763  3357889999999998654  8999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      |||.+++.+++++|+++|+++|+++|+||+|  +............++++++.|+||.+|++|+|+||++++   +++++
T Consensus       169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~---~~l~~  245 (380)
T PRK06225        169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT---PDLIE  245 (380)
T ss_pred             CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC---HHHHH
Confidence            9999999999999999999999999999999  443221111223467899999999999999999999998   78888


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCCChH
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      .+..... ..++.+.+.+.++..++.....+.++..+.++++++.+.+.|+++++..+ ..+.+++|+|+.++....+..
T Consensus       246 ~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  324 (380)
T PRK06225        246 VVKSIVI-NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPE  324 (380)
T ss_pred             HHHHHHh-cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHH
Confidence            8776542 35667888888888888764566777777777788888888887544222 234558899999875434678


Q ss_pred             HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ++..+|. ++||.++||..|+   .++++|++++. +++++++++++|+++++++++
T Consensus       325 ~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        325 DLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             HHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence            8888886 8899999997664   24699999996 789999999999999987754

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=3.9e-45  Score=345.39  Aligned_cols=351  Identities=21%  Similarity=0.334  Sum_probs=282.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhc-----------CCCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEE
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVW-----------DPSISKYGADEGLPELRDALVKKLNQENK----LYKSSVM   93 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~-----------~~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~   93 (398)
                      ..++|+|+.+.|.+- .+++.+.+.+...           -.....|.+..|..++|+++++++.+.++    +++++|+
T Consensus        46 p~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Iv  124 (447)
T PLN02607         46 PSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIV  124 (447)
T ss_pred             CCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeE
Confidence            455999999998764 6677777666432           01234577778999999999999998754    5789999


Q ss_pred             EecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCC-CCCCCCChHHHHHhhcc----CCCCeE
Q 015890           94 VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKL  167 (398)
Q Consensus        94 ~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~----~~~~~~  167 (398)
                      +|+|++++++.++.+++++||.|+++.|.|+++...++ ..|++++.+ +.+ .+++.+|++.++++++.    +.++|+
T Consensus       125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v-~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~  203 (447)
T PLN02607        125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPI-HCDSSNNFQVTPQALEAAYQEAEAANIRVRG  203 (447)
T ss_pred             EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEE-eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence            99999999999999999999999999999999987776 578999988 765 34577899999998874    233699


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc----------ccCCcEEEEcccccccCC
Q 015890          168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC----------VEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       168 v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~----------~~~~~~i~~~s~sK~~~~  234 (398)
                      +++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|++.+. +.          ...++++++.|+||.||+
T Consensus       204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~  283 (447)
T PLN02607        204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL  283 (447)
T ss_pred             EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence            999999999999999999999999999999999999999  44543221 11          114678999999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      +|+|+||+++.+  +++++.+.....  ....+.+.|.++..+|++..   .++.+.++++.++++.+.+.|++.+. .+
T Consensus       284 ~GlRvG~ivs~n--~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi-~~  358 (447)
T PLN02607        284 PGFRVGTIYSYN--DKVVTTARRMSS--FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGI-EC  358 (447)
T ss_pred             CcceEEEEEEcC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Confidence            999999999853  677776655432  23467889999999998632   45567777888889999999998764 67


Q ss_pred             ccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..+.+|+|+|+++++..     ....++++++++++||.+.||..|+.  ++|+||+++..+++.+++++++|.+++++.
T Consensus       359 ~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~  438 (447)
T PLN02607        359 LKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRR  438 (447)
T ss_pred             ccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence            77888999999997421     12346777788778999999998864  789999999767899999999999999765


Q ss_pred             hc
Q 015890          385 VK  386 (398)
Q Consensus       385 ~~  386 (398)
                      ..
T Consensus       439 ~~  440 (447)
T PLN02607        439 KT  440 (447)
T ss_pred             Hh
Confidence            43

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-45  Score=348.65  Aligned_cols=349  Identities=22%  Similarity=0.330  Sum_probs=274.7

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh-hhcC--C-C--CCcEEEecChHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN-QENK--L-Y--KSSVMVTAGANQAFV  103 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~-~~~~--~-~--~~~v~~~~g~t~a~~  103 (398)
                      .+.++|+.|.+++++|+.+.+++. .+..   ..|+++.|..++|+++++++. +..+  . +  .++|++|+|+++++.
T Consensus       100 ~~~i~l~~g~p~~~~~~~v~e~~~-~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~  175 (527)
T PRK09275        100 RDAVSYVRDQLGFDADEFVYELVD-GIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMC  175 (527)
T ss_pred             HHHHhhcCCCCCCCCCHHHHHHHH-HHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence            357999999999999888888554 4432   259999999999999998554 3322  1 2  248999999999999


Q ss_pred             HHHHH-----hccCCCEEEEeCCCCcChhhHHHhcC--cEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       104 ~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g--~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      .++.+     ++++||+|+++.|+|+.|...++..|  ++++.+ +.+ +++|.+|.+.+++++++++  |+|++++|+|
T Consensus       176 ~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v-~~~~~~~f~~d~~~l~~~~~~~t--kai~l~nP~N  252 (527)
T PRK09275        176 YIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHI-NADEENEWQYPDSELEKLRDPSI--KALFLVNPSN  252 (527)
T ss_pred             HHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEe-ecCcccCCCCCHHHHHhhcCCCC--CEEEEeCCcC
Confidence            99986     68999999999999999999887775  566666 554 4568999999999887665  9999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC--cH
Q 015890          176 PSGTYIPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE  249 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~--~~  249 (398)
                      |||.+++.+++++|+++|++  +++++|+||+|  +.+.........+++++++.|+||.||++|||+||++++++  ..
T Consensus       253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~  332 (527)
T PRK09275        253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD  332 (527)
T ss_pred             CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence            99999999999999999964  59999999999  54321111112346899999999999999999999999852  00


Q ss_pred             HHHHHH--------------------------------HHhhccCCCCcchHHHHHH-----HHHhcCCchHHHHHHHHH
Q 015890          250 GFATQL--------------------------------LKVQDNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL  292 (398)
Q Consensus       250 ~~~~~l--------------------------------~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~  292 (398)
                      ++++.+                                .......+.+.+.+.|.++     .++++..+.+.++.++.+
T Consensus       333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~  412 (527)
T PRK09275        333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDII  412 (527)
T ss_pred             HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence            122222                                3444556778888888873     344655457788888999


Q ss_pred             HHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCCCC-CC
Q 015890          293 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG  356 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~  356 (398)
                      +++++.+.+.|.. +. ....+.+++|+|++++..               ..++.+++.+|+++.||.+.||+.|+. ++
T Consensus       413 ~~Rr~~l~~~Lg~-~~-~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~  490 (527)
T PRK09275        413 RRRYKALYEGLGL-PE-PEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEW  490 (527)
T ss_pred             HHHHHHHHHHcCC-CC-cCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCC
Confidence            9999999888832 22 334688899999998631               125788999999999999999999974 57


Q ss_pred             eEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          357 HLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      ++|+|++..+++++.+++++|.+++.++.++
T Consensus       491 ~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~  521 (527)
T PRK09275        491 SVRVSLANLNEEDYAKIGKAIRKLLDEYYEE  521 (527)
T ss_pred             eEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999778899999999999999887654

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1e-44  Score=346.11  Aligned_cols=350  Identities=21%  Similarity=0.316  Sum_probs=277.0

Q ss_pred             CCeEEcCCccCCC--CC-cHHHHHHHHHhhcC-------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEe
Q 015890           30 KNAVSLAQGVVYW--QP-PKMAMEKVKELVWD-------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVT   95 (398)
Q Consensus        30 ~~~~~l~~g~~~~--~~-~~~v~~a~~~~~~~-------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~   95 (398)
                      .++|+|+.+.|++  .. ++.+.+.....+..       .....|++..|.+++|+++++++.+.+|    +++++|++|
T Consensus        46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit  125 (496)
T PLN02376         46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMS  125 (496)
T ss_pred             CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEc
Confidence            4699999999887  32 44554443332111       1245688889999999999999998766    679999999


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCCC-CCCCCChHHHHHhhc----cCCCCeEEE
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSS-KTLHPDADWLEKTLE----TKPTPKLVS  169 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~----~~~~~~~v~  169 (398)
                      +|++++++.++.+++++||.|+++.|+|+++...++ ..|++++.+ +.+. +++.+|++.+++.++    ...++++|+
T Consensus       126 ~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v-~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~  204 (496)
T PLN02376        126 GGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPV-PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI  204 (496)
T ss_pred             cchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEE-eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence            999999999999999999999999999999998777 589999999 7753 457889999987643    123479999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---c---------cCCcEEEEcccccccCCC
Q 015890          170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---V---------EGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       170 i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~---------~~~~~i~~~s~sK~~~~~  235 (398)
                      +++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|++.+...   .         ..+.+++++|+||.||+|
T Consensus       205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp  284 (496)
T PLN02376        205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP  284 (496)
T ss_pred             EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence            9999999999999999999999999999999999999  5565432211   1         013467789999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+|+||+++++  +.+.+.+.....  ....+.+.|.++..+|+...   .++.+.++.+.++++.+.+.|++.+. .+.
T Consensus       285 GlRvG~li~~~--~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi-~~~  359 (496)
T PLN02376        285 GFRVGIVYSFN--DSVVSCARKMSS--FGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADI-ACL  359 (496)
T ss_pred             cceEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccc
Confidence            99999999864  566665544432  33578899999999998621   34455677788888999999988754 677


Q ss_pred             cCCccEEEEeeCCCCCC------ChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKHL------DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+.+|+|+|+++++...      +..+++..++++.||.+.||+.|+  .++++||+++..+++++++++++|.+++.+.
T Consensus       360 ~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~  439 (496)
T PLN02376        360 TSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKN  439 (496)
T ss_pred             CCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHh
Confidence            78889999999975321      235678888877899999999885  4689999999767899999999999999754


Q ss_pred             h
Q 015890          385 V  385 (398)
Q Consensus       385 ~  385 (398)
                      .
T Consensus       440 ~  440 (496)
T PLN02376        440 K  440 (496)
T ss_pred             h
Confidence            4

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=2.5e-44  Score=340.62  Aligned_cols=347  Identities=28%  Similarity=0.405  Sum_probs=296.8

Q ss_pred             CCeEEcCCccCCCC--CcHHHHHHHHHhhcC--CC-CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890           30 KNAVSLAQGVVYWQ--PPKMAMEKVKELVWD--PS-ISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (398)
Q Consensus        30 ~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~--~~-~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~  102 (398)
                      ...++|+.|.++..  +.....+.+.+.+..  .. ...|.+..|..++|+.+++++....|  +++++|++|+|+++|+
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            78999999875543  333444455555432  22 56787889999999999999985555  4578999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYI  181 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~  181 (398)
                      +++.+.++++||.|++++|+|++....++..|++++.+ |+|++|  +|+|.|++.++..+ +|+++++ +.+||||.++
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v-p~d~~G--~~~e~le~~~~~~~-~k~~y~~P~~qNPtG~tm  244 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV-PVDEDG--IDPEALEEALAQWK-PKAVYVTPTFQNPTGVTM  244 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec-CCCCCC--CCHHHHHHHHhhcC-CcEEEECCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999 999776  59999999998764 7998888 6699999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      +.+..++|+++|++||+++|.|+.|  +.+++.+..    .+..+++++++||||.+. ||+|+||++++   +++++++
T Consensus       245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p---~~~~~~~  320 (459)
T COG1167         245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP---PELIEKL  320 (459)
T ss_pred             CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC---HHHHHHH
Confidence            9999999999999999999999999  777754432    223589999999999996 99999999999   8999999


Q ss_pred             HHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCC--CCccccCCccEEEEeeCCCCCCCh
Q 015890          256 LKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      ...+.....+++.+.|.+++..+..+  +.++++.++.++++++.+.+.|+++.  ...+..|.+|+|+|+++++.. +.
T Consensus       321 ~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~-~~  399 (459)
T COG1167         321 LRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-DA  399 (459)
T ss_pred             HHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-CH
Confidence            99888889999999999999999864  47889999999999999999999864  467778998999999999864 67


Q ss_pred             HHHHHHHHHhcCeEEec-CCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          332 FEVVRWLAHRHGVVVIP-GGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~-g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .++....+ ++|+.+.| |..|..    .+++|++++..+++++++++.+|.+++++...
T Consensus       400 ~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~  458 (459)
T COG1167         400 RELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA  458 (459)
T ss_pred             HHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            77887765 88999999 877753    34899999998899999999999999987653

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.1e-45  Score=340.63  Aligned_cols=328  Identities=20%  Similarity=0.303  Sum_probs=276.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ++++.++|+.|.|++++|+.+++++.+.+..  ...| +..|..++|+++++++    ++++++|++|+|+++++..++.
T Consensus        27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~~~~   99 (366)
T PRK01533         27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQIISR   99 (366)
T ss_pred             CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            5678999999999999999999999887654  2346 6778899999999997    7889999999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|+.+...++..|.+++.+ +.++  +.+|++.+++.+++++  +++++++||||||.+++.++++
T Consensus       100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~--~~~d~~~l~~~~~~~~--~~v~i~~P~NPTG~~~~~~~l~  174 (366)
T PRK01533        100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEV-ALNN--GVYDLDEISSVVDNDT--KIVWICNPNNPTGTYVNDRKLT  174 (366)
T ss_pred             HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEe-ecCC--CCcCHHHHHHHhCcCC--cEEEEeCCCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999 7753  3579999999987654  8999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCC-cc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGR-KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~-~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      +|+++|++++ ++|+||+|  +.+.+. ..   .....+++++++|+||.||++|+|+||++++   +++++.+..... 
T Consensus       175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~---~~~~~~l~~~~~-  249 (366)
T PRK01533        175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH---EELIEKLNVVRL-  249 (366)
T ss_pred             HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC---HHHHHHHHHhcC-
Confidence            9999998766 67789999  444321 11   1113568999999999999999999999998   889998887653 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       +++.+.++|.++..+|+. .++.++..+...++++++.+.++.++. .+..+. ++|+|++++    +..++.+.|+ +
T Consensus       250 -~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~g~-~~~~~~-~nf~~~~~~----~~~~~~~~l~-~  320 (366)
T PRK01533        250 -PFNVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKENEI-PFYQSQ-TNFIFLPVE----NGGEIYEACA-H  320 (366)
T ss_pred             -CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCc-CcEEEEeCC----CHHHHHHHHH-H
Confidence             578999999999999975 577777778888888888888887764 666665 889999986    3567777775 8


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhccc
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                      +||.|++   |  ++++||+++.  .++.++++++|++.+....+..
T Consensus       321 ~GI~Vr~---~--~~~iRis~~~--~~~~~~l~~al~~~~~~~~~~~  360 (366)
T PRK01533        321 AGFIIRP---F--PNGVRITVGT--REQNEGVISVLQQHFENKKRKS  360 (366)
T ss_pred             CCcEEcc---C--CCceEEeCCC--HHHHHHHHHHHHHHHHhccccc
Confidence            9999998   2  5889999995  7899999999998887765443

>PLN02231 alanine transaminase

Probab=100.00  E-value=3.1e-44  Score=344.52  Aligned_cols=366  Identities=24%  Similarity=0.352  Sum_probs=286.8

Q ss_pred             hHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcC--C-CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCc
Q 015890           17 PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD--P-SISKYGADEGLPELRDALVKKLNQENK--LYKSS   91 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~   91 (398)
                      +.++++.... +..++++|..+.+.++  ..+++++.+.+..  + ..+.|+++.|.+++|+.+++++.++.|  +++++
T Consensus       117 ~~~r~v~~~~-~~p~~i~~~~~~~~fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~  193 (534)
T PLN02231        117 TFFREVLALC-DHPSLLDKSETHGLFS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPND  193 (534)
T ss_pred             HHHHHHHHhc-cCCccCCCCCccccCC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCccc
Confidence            3344444333 3467888886655554  4666666666653  2 367799999999999999999988765  56899


Q ss_pred             EEEecChHHHHHHHHHHhcc-CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC----CCC
Q 015890           92 VMVTAGANQAFVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTP  165 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~----~~~  165 (398)
                      |++|+|+++++..++.+++. +||.|+++.|+|+.+...++..|.+++.+ +.++ ++|.+|+++|++.++..    ..+
T Consensus       194 I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-~l~~~~~~~~d~~~Le~~l~~~~~~~~~~  272 (534)
T PLN02231        194 IFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPY-YLDEATGWGLEISELKKQLEDARSKGITV  272 (534)
T ss_pred             EEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEE-ecCcccCCCCCHHHHHHHHHHHhhcCCCe
Confidence            99999999999999999984 79999999999999999999999999999 8775 46889999999998641    136


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccccc-----------cCCcEEEEcccccc
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHCCV-----------EGDHVVNLFSFSKA  231 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~~~-----------~~~~~i~~~s~sK~  231 (398)
                      +++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|+ +......           ...++++++|+||.
T Consensus       273 k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~  352 (534)
T PLN02231        273 RALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKG  352 (534)
T ss_pred             EEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcc
Confidence            99999999999999999999999999999999999999999  6664 2222110           11258999999997


Q ss_pred             c-CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---c----h---HHHHHHHHHHHHHHHHH
Q 015890          232 Y-GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---P----E---WVTERVKDLVRNREIIR  300 (398)
Q Consensus       232 ~-~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~---~~~~~~~~~~~~~~~l~  300 (398)
                      + |++|+|+||+++....+++++.+..... ...+.+...|.++..+++..   +    .   +..+..+.++++++.+.
T Consensus       353 ~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~  431 (534)
T PLN02231        353 YYGECGKRGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLE  431 (534)
T ss_pred             cccCCccceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6 7899999999863111788888876654 35677888898888888631   1    1   22344678888999999


Q ss_pred             HHhccCCCCccccCCccEEEEeeC--CCCC---------CChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCC
Q 015890          301 EALSPLGEGAVKGGEGAIYLWARL--PEKH---------LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLV  366 (398)
Q Consensus       301 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~  366 (398)
                      +.|++++++.+..|++++|+|+++  +...         ..+..++.+|+++.||.+.||+.|+.   ..++|+++. .+
T Consensus       432 ~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~  510 (534)
T PLN02231        432 DALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQ  510 (534)
T ss_pred             HHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CC
Confidence            999988667888899999999555  3210         12344667788889999999999974   347999997 48


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q 015890          367 EDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       367 ~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                      ++++++++++|.++++++.++.
T Consensus       511 ~e~l~eal~RL~~~~~~~~~~~  532 (534)
T PLN02231        511 EDKIPAIVSRLTEFHKSFMDEF  532 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999987654

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.2e-45  Score=339.20  Aligned_cols=335  Identities=22%  Similarity=0.320  Sum_probs=270.8

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~  104 (398)
                      ..+++|+.|.+++++|+.+.+++.+.+.... ...| +..|..++|+++++++++.++    +++++|++|+|+++++..
T Consensus        28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~  106 (374)
T PRK02610         28 IQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRS  106 (374)
T ss_pred             cceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHH
Confidence            3589999999999999999999998776532 3568 457899999999999987653    678999999999999998


Q ss_pred             HHHHhccCCC-EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015890          105 IVLTLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       105 ~~~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~  181 (398)
                      ++.+++.+|| +|+++.|+|..+...++..|++++.+ +.+++++.+|++++++.++.  ..++++|++++||||||.++
T Consensus       107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~  185 (374)
T PRK02610        107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRV-GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL  185 (374)
T ss_pred             HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEe-cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC
Confidence            8888877775 89999999999999999999999999 87766678999999999874  12369999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                      +.++++++.++|  +++++|+||+|  |.+..........+++++++|+||.||+||+|+||++++   +++++.+....
T Consensus       186 s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~---~~l~~~l~~~~  260 (374)
T PRK02610        186 TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH---PELIAVLEKVR  260 (374)
T ss_pred             CHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecC---HHHHHHHHHhc
Confidence            999999999876  38999999999  433211111223457889999999999999999999998   88988887766


Q ss_pred             ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890          260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      .  .++.+.+.|.++..+++..+.+.+. .+.+.+.++.+.+.|++++.+.+. |.+++|+|++++.. .+..++++.+ 
T Consensus       261 ~--~~~~~~~~q~a~~~~l~~~~~~~~~-~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~-~~~~~~~~~l-  334 (374)
T PRK02610        261 L--PYNLPSFSQLAAQLALEHRQELLAA-IPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQD-AALAALHQAL-  334 (374)
T ss_pred             C--CCCCCHHHHHHHHHHhcCHHHHHHH-HHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCC-CCHHHHHHHH-
Confidence            3  4667889999999888764344444 344445577788888877554544 67799999999754 3567788776 


Q ss_pred             HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          340 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .++||.++++     ++++||+++.  .+++++++++|++++.++
T Consensus       335 ~~~gi~v~~~-----~~~lRls~~~--~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        335 KAQGTLVRHT-----GGGLRITIGT--PEENQRTLERLQAALTQL  372 (374)
T ss_pred             HHCCEEEEeC-----CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence            5899999863     5789999985  567899999999887653

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=7.8e-44  Score=335.41  Aligned_cols=336  Identities=25%  Similarity=0.411  Sum_probs=268.6

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +.++++|+.|.+++++++.+.+++.+.+.+.    ....|++..|.+++|+++++++.+. ++++++|++|+|+++++..
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~  110 (402)
T TIGR03542        32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFR  110 (402)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHH
Confidence            5789999999999999999999998877642    2356888899999999999986432 4788999999999999998


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCc-----------EEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-----------THILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      +. .++.+||+|+++.|+|..+...++..|+           +++.+ +.++ +++.+|++.     ..  .+++|++++
T Consensus       111 l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~-----~~--~~~~i~l~n  181 (402)
T TIGR03542       111 LQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYL-PCTKENNFIPDLPE-----EP--KIDIIYLCS  181 (402)
T ss_pred             HH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEe-ecchhhCCCCCccc-----cC--CceEEEEeC
Confidence            64 5568899999999999999999999999           88888 7653 456555321     12  259999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccc--cc--CCcEEEEcccccccCCCcceeEEEEcc
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCC--VE--GDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~--~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      ||||||.+++.+++++|+++|+++|+++|+||+|  +.+++. +...  ..  .+++++++|+||.||+||+|+||++++
T Consensus       182 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~  261 (402)
T TIGR03542       182 PNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP  261 (402)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence            9999999999999999999999999999999999  555442 1111  11  246899999999999999999999998


Q ss_pred             CCcHHHH--------HHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          246 SEVEGFA--------TQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       246 ~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                         ++++        +.+.........+.+.+.|.++..++... ..+..+..+.++++++.+.+.|++.+ ..+..+.+
T Consensus       262 ---~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~  337 (402)
T TIGR03542       262 ---KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEH  337 (402)
T ss_pred             ---HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCc
Confidence               5665        22222222223357888998888888752 24566667788888999999998875 46777778


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ++|+|++++.. .++.+++.++++++||.++||+.|+.  .+++||+++. +++++++++++|+++
T Consensus       338 ~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       338 APYLWVKTPEG-ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEACERIKEA  401 (402)
T ss_pred             eeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHhh
Confidence            99999999863 35678888888778999999998764  5799999875 789999999999875

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.2e-44  Score=332.55  Aligned_cols=325  Identities=25%  Similarity=0.352  Sum_probs=272.0

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+.++++|+.|.+++++||.+.+++.+.+..  ...|+ ..+..++|+++++++    ++++++|++|+|++++++.+++
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~~~~  100 (357)
T PRK14809         28 DPDDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDYLAR  100 (357)
T ss_pred             CccceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            4578999999999999999999999887654  56784 578899999999987    6889999999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      +++++||.|++++|+|..+...++..|..++.+ +.+. +++.++.+.+++... +  +++|++++||||||.+++.+++
T Consensus       101 ~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~-~--~k~i~l~~p~NPTG~~~s~~~~  176 (357)
T PRK14809        101 AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREY-PVSKADDFEQTADTVLDAYD-G--ERIVYLTSPHNPTGSEIPLDEV  176 (357)
T ss_pred             HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEE-ecccCcCCCcCHHHHHHhhc-C--CcEEEEeCCCCCCCcCCCHHHH
Confidence            999999999999999988888888899998888 7653 467788888777653 2  5899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      ++|+++|++ ++++|+||+|  +.+.+.... ....+++++++|+||.||++|+|+||++++   +++++.+.+...  +
T Consensus       177 ~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~---~~~~~~~~~~~~--~  250 (357)
T PRK14809        177 EALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARVNT--P  250 (357)
T ss_pred             HHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC---HHHHHHHHHhCC--C
Confidence            999999875 7899999999  554332111 123468999999999999999999999999   788888877653  5


Q ss_pred             CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      ++.+.+.+.++..++.. .+++++.++.++++++.+.+.|+...    . +.+++|+|++++    +..++++.+ .++|
T Consensus       251 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~~~g~f~~~~~~----~~~~~~~~l-~~~g  319 (357)
T PRK14809        251 FAASELACRAGLAALDD-DEHVERTVETARWAREYIREELDAPT----W-ESAGNFVLAEVG----DASAVAEAA-QERG  319 (357)
T ss_pred             CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCcc----C-CCCCCEEEEECC----CHHHHHHHH-HHCC
Confidence            67788999998888875 67788888888889999999887532    2 456899999885    356788776 5889


Q ss_pred             eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      |.+++|..|+.+++||++++.  .+++++++++|+++++
T Consensus       320 v~v~~g~~f~~~~~iRls~~~--~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        320 VIVRDCTSFGLPECIRITCGT--REETERAVEVLNEVLA  356 (357)
T ss_pred             EEEEECccCCCCCeEEEecCC--HHHHHHHHHHHHHHhc
Confidence            999999999878899999874  6899999999988764

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.3e-43  Score=328.13  Aligned_cols=326  Identities=17%  Similarity=0.306  Sum_probs=271.1

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.++.++|+.+.+++.+.+..  ...|+ ..+..++|+++++++    ++++++|++|+|+++++..++.++
T Consensus        19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~~   91 (354)
T PRK06358         19 NMILDFSANINPLGVPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIVKVT   91 (354)
T ss_pred             cceEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHHh
Confidence            45799999999998899999999987643  56684 456789999999998    688999999999999999999987


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                       .+ ++|+++.|+|+.+...++..|.+++.+ +.+. +++.+| +.+.+.+..+  ++++++++|+||||.+++.+++++
T Consensus        92 -~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d-~~~~~~~~~~--~~~v~~~~P~NPtG~~~~~~~~~~  165 (354)
T PRK06358         92 -KP-KKVLILAPTFAEYERALKAFDAEIEYA-ELTEETNFAAN-EIVLEEIKEE--IDLVFLCNPNNPTGQLISKEEMKK  165 (354)
T ss_pred             -CC-CcEEEecCChHHHHHHHHHcCCeeEEE-eCccccCCCcc-HHHHHhhccC--CCEEEEeCCCCCCCCccCHHHHHH
Confidence             33 689999999999999999999999999 7764 457788 6666666544  599999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      |+++|+++|+++|+||+|  +.+++....    ....+++++++|+||.||++|+|+||+++++  +.+++.+.....  
T Consensus       166 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~--~~~~~~~~~~~~--  241 (354)
T PRK06358        166 ILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMRE--  241 (354)
T ss_pred             HHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence            999999999999999999  665543222    1234689999999999999999999999864  677788877664  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      .++.+.+.|.++..+++. ..++++..+.++++++.+.+.|++.++..+..+. ++|+|++++.    ..++.+.++ ++
T Consensus       242 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~----~~~~~~~l~-~~  314 (354)
T PRK06358        242 PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKLEK----PIDLRKELL-KK  314 (354)
T ss_pred             CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEcCc----hHHHHHHHH-HC
Confidence            577889999999999974 4667888888999999999999887665666665 7799999873    468888776 78


Q ss_pred             CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ||.+++|..|+.  +++|||+++.  .++.++++++|.+++
T Consensus       315 gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~~l~~~~  353 (354)
T PRK06358        315 GILIRSCSNYRGLDENYYRVAVKS--REDNKKLLKALEVIL  353 (354)
T ss_pred             CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence            999999998843  5789999995  778888888887654

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-42  Score=327.05  Aligned_cols=340  Identities=27%  Similarity=0.463  Sum_probs=279.9

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~  104 (398)
                      +.+.++|+.|.+++++++.+.+++.+.+...  ....|++..|..++|+.+++++.+.++  +++++|++++|+++++..
T Consensus        32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~  111 (394)
T PRK06836         32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV  111 (394)
T ss_pred             CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence            4668999999888888899999988876532  256798889999999999999987664  578999999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      ++.+++++||.|++++|+|..+...++..|++++.+ +.+++++.+|++++++.+++++  ++|++++|+||||.++|.+
T Consensus       112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~~~  188 (394)
T PRK06836        112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEAAITPKT--KAVIINSPNNPTGVVYSEE  188 (394)
T ss_pred             HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEE-ecCCccCcCCHHHHHhhcCcCc--eEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999999999999999999 8877667789999999997654  9999999999999999999


Q ss_pred             HHHHHHHHHHH------cCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH-
Q 015890          185 LLKRISDLCKA------AGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT-  253 (398)
Q Consensus       185 ~l~~i~~l~~~------~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~-  253 (398)
                      ++++|+++|++      ||+++|+||+|  +.+++....  ....+++++++|+||.||+||+|+||++++   +++.+ 
T Consensus       189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~---~~~~~~  265 (394)
T PRK06836        189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN---PEMEDA  265 (394)
T ss_pred             HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC---HHHhhh
Confidence            99999999999      89999999999  655442211  223568999999999999999999999998   44322 


Q ss_pred             -----HHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          254 -----QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       254 -----~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                           .+...... ...+.+.+.|.++...++..     ...+.++++++.+.+.|++++. .+..+.+++|+|+.++. 
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~r~~l~~~L~~~g~-~~~~~~gg~~~~~~~~~-  338 (394)
T PRK06836        266 DDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-----VDVSIYKRNRDLLYDGLTELGF-ECVKPQGAFYLFPKSPE-  338 (394)
T ss_pred             HHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHhCCC-EeecCCceEEEEEeCCC-
Confidence                 22112221 12456788888888888752     1245567778888889888764 77778889999999875 


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                       .+..+++..+ .++||.+.||..|+.++++||+++. +++++++++++|+++++.+
T Consensus       339 -~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        339 -EDDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             -CCHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence             2567777655 5889999999988878899999995 8999999999999998764

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=5.9e-44  Score=337.23  Aligned_cols=345  Identities=21%  Similarity=0.298  Sum_probs=265.6

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH-HHHhhhcC--C-CCC--cEEEecChHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV-KKLNQENK--L-YKS--SVMVTAGANQAFVN  104 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~-~~l~~~~~--~-~~~--~v~~~~g~t~a~~~  104 (398)
                      +.++|+.|.++++++ +.+.++.+.+..   ..|++..+..++++++. +++++.++  . +++  +|++|+|+++|+..
T Consensus        95 ~~i~l~~g~p~~~~~-~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~  170 (521)
T TIGR03801        95 DIISYVIDQLGFDPD-AFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCY  170 (521)
T ss_pred             HHHhhcCCCCCCCCC-HHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence            579999999999855 445655555432   25876777777777776 56666543  2 333  89999999999999


Q ss_pred             HHHH-----hccCCCEEEEeCCCCcChhhHHHhc--CcEEEEeccCCC-CC-----CCCChHHHHHhhccCCCCeEEEEe
Q 015890          105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMT--GVTHILVGPCSS-KT-----LHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus       105 ~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~-~~-----~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      ++.+     ++++||+|+++.|+|++|...++..  |++++.+ +.++ ++     |.+|.+.++++++++  +++++++
T Consensus       171 ~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i-~~~~~~~~g~~~~~~d~~~l~~~~~~~--~kai~l~  247 (521)
T TIGR03801       171 IFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI-KADEMTEDGTHTWQYPDKELEKLRDPS--IKALFVV  247 (521)
T ss_pred             HHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe-ecccccccccccCCCCHHHHHHhcCCC--CcEEEEe
Confidence            9987     6899999999999999999887765  6788887 6542 22     889999999987765  4999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      +|+||||.+++.+++++|+++|+++  ++++|+||+|  |.+..........++++++.|+||.||++|||+||++.++ 
T Consensus       248 nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~-  326 (521)
T TIGR03801       248 NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK-  326 (521)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc-
Confidence            9999999999999999999999986  9999999999  5442222222234689999999999999999999999884 


Q ss_pred             cHH----HHHH--------H------------------------HHhhccCCCCcchHHHH-----HHHHHhcCCchHHH
Q 015890          248 VEG----FATQ--------L------------------------LKVQDNIPICASIISQH-----LALYSLQTGPEWVT  286 (398)
Q Consensus       248 ~~~----~~~~--------l------------------------~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~  286 (398)
                       ..    +++.        +                        +......+.+.+.+.|.     ++.++++..+.+.+
T Consensus       327 -~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~  405 (521)
T TIGR03801       327 -DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKA  405 (521)
T ss_pred             -hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHH
Confidence             21    2211        1                        22333445667777776     34455555457788


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC---------------CChHHHHHHHHHhcCeEEecCCC
Q 015890          287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH---------------LDDFEVVRWLAHRHGVVVIPGGA  351 (398)
Q Consensus       287 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ll~~~gi~v~~g~~  351 (398)
                      +..+.++++++.+.+.|. .. .....+.+++|+|+++++..               .++.+++.+|+++.||.+.||..
T Consensus       406 ~~~~~~~~R~~~l~~~Lg-~~-~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~  483 (521)
T TIGR03801       406 ETKDICRRREKLLFRGLG-LP-LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGG  483 (521)
T ss_pred             HHHHHHHHHHHHHHHhcC-CC-CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchh
Confidence            888899999999999882 22 13355778999999997421               15678999999999999999999


Q ss_pred             CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          352 CGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       352 ~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      |+. .+++|||++..+++++.++.++|.+.+.++.+
T Consensus       484 Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~  519 (521)
T TIGR03801       484 FGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE  519 (521)
T ss_pred             cCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence            975 46899999866889999999999999987654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.1e-44  Score=331.56  Aligned_cols=325  Identities=22%  Similarity=0.293  Sum_probs=272.1

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      ..++++|+.|.++++++|.+.+++.+.+..   ..|.+..+..++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        28 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~~  100 (359)
T PRK03158         28 LEKIVKLASNENPYGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMISRA  100 (359)
T ss_pred             CCceEEecCCCCCCCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHHHHH
Confidence            348999999999998899999999887654   23557788999999999998    67789999999999999999999


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ++++||+|++++|+|+.+...++..|.+++.+ +.+  ++.+|++.+++.++++  ++++++++|+||||.+++.+++.+
T Consensus       101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~d~~~l~~~~~~~--~~~v~i~~p~NPtG~~~~~~~l~~  175 (359)
T PRK03158        101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREV-PLK--DGGHDLEAMLKAIDEQ--TKIVWICNPNNPTGTYVNHEELLS  175 (359)
T ss_pred             HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEE-ecC--CCCcCHHHHHHhcCCC--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999998 776  3457999999988765  489999999999999999888888


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      +++.|+ +|+++|+||+|  +.+.+....    ....+++++++|+||.||++|+|+||++++   +++++.+.....  
T Consensus       176 ~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~~--  249 (359)
T PRK03158        176 FLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS---EELIEKLNIARP--  249 (359)
T ss_pred             HHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC---HHHHHHHHHhcC--
Confidence            887764 69999999999  544432111    113468999999999999999999999998   788888877664  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      .++.+.++|.++..+++. .++.++..+.++++++.+.+.|++.+. .+.++ +++|+|++++.   +..++++.|+ ++
T Consensus       250 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~g~~i~~~~~~---~~~~~~~~l~-~~  322 (359)
T PRK03158        250 PFNTTRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKEYGL-FYYPS-QTNFIFVDTGR---DANELFEALL-KK  322 (359)
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eeCCC-cCcEEEEECCC---CHHHHHHHHH-HC
Confidence            467899999999999975 567777777788888889888887753 55544 48899998852   5678888886 78


Q ss_pred             CeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       343 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ||.++||..|+.++++||+++.  .+++++++++|+++
T Consensus       323 gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~  358 (359)
T PRK03158        323 GYIVRSGAALGFPTGVRITIGL--KEQNDKIIELLKEL  358 (359)
T ss_pred             CeEEeeCCCCCCCCeEEEecCC--HHHHHHHHHHHHHh
Confidence            9999999988878899999994  78888888888764

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-43  Score=329.29  Aligned_cols=324  Identities=24%  Similarity=0.349  Sum_probs=267.1

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +.++++|+.|.+++++||.+++++.+. ..  ...| +..+..++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~~~~~  122 (380)
T PLN03026         51 PEDIVKLDANENPYGPPPEVLEALGNM-KF--PYVY-PDPESRRLRAALAEDS----GLESENILVGCGADELIDLLMRC  122 (380)
T ss_pred             ccceEEccCCCCCCCCCHHHHHHHHhh-Hh--hccC-CCCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHHHHHH
Confidence            568999999999999999999988652 11  3457 4556789999999987    67889999999999999999999


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      ++++||+|+++.|+|..+...++..|.+++.+ +.++ ++.+|++.+++.+ +++  +++|++++|+||||.+++.++++
T Consensus       123 ~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~--~~~v~l~~P~NPTG~~~~~~~l~  198 (380)
T PLN03026        123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKV-PRTP-DFSLDVPRIVEAVETHK--PKLLFLTSPNNPDGSIISDDDLL  198 (380)
T ss_pred             hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHHhccC--CcEEEEeCCCCCCCCCCCHHHHH
Confidence            99999999999999998988889999999998 7753 4678999999998 454  59999999999999999977777


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +|++.+    +++|+||+|  |.+.+.... ....+++++++|+||.||++|+|+||++++   +++++.+.+...  .+
T Consensus       199 ~l~~~~----~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~---~~~i~~l~~~~~--~~  269 (380)
T PLN03026        199 KILELP----ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQ--PY  269 (380)
T ss_pred             HHHhcC----CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC---HHHHHHHHHhcC--CC
Confidence            776542    899999999  544332111 123578999999999999999999999999   889988877765  56


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      +.+.++|.++.++|+. .+++++.++.+.++++.+.+.|+++++..+ .+.+++|+|++++.. .+..++.+.|+ ++||
T Consensus       270 ~~~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~l~-~~gI  345 (380)
T PLN03026        270 NVSVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-RDAKKLKEDLA-KMGV  345 (380)
T ss_pred             CCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-CCHHHHHHHHH-HCCe
Confidence            7889999999999975 577888888999999999999998876444 456699999998743 35678888886 8999


Q ss_pred             EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      .++++..++.++++|||++.  .+++++++++|++
T Consensus       346 ~v~~~~~~~~~~~lRis~~~--~~~~~~l~~al~~  378 (380)
T PLN03026        346 MVRHYNSKELKGYIRVSVGK--PEHTDALMEALKQ  378 (380)
T ss_pred             EEEECCCCCCCCEEEEecCC--HHHHHHHHHHHHH
Confidence            99998766567899999995  5667777777654

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2e-43  Score=332.69  Aligned_cols=355  Identities=20%  Similarity=0.197  Sum_probs=270.6

Q ss_pred             hhccCchHHHHHHHHHHc--CCCeEEcCCccC-CCCCcHHHHHHHHHhh----cCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890           11 ALETEMPIMVQIQELVRG--AKNAVSLAQGVV-YWQPPKMAMEKVKELV----WDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~--g~~~~~l~~g~~-~~~~~~~v~~a~~~~~----~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      +.....+.++.+.+....  +++.++|+.|.+ +..+++.+.+++.+++    ......+|++..|.+++|+++++++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   87 (404)
T PTZ00376          8 VPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFG   87 (404)
T ss_pred             CCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence            333333445554444432  368899999986 3555555555555543    223357899999999999999999876


Q ss_pred             hcC--CCCCcEE--EecChHHHHHHHHH---HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890           84 ENK--LYKSSVM--VTAGANQAFVNIVL---TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL  155 (398)
Q Consensus        84 ~~~--~~~~~v~--~~~g~t~a~~~~~~---~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l  155 (398)
                      ..+  +++++|+  .|.|+++++..++.   +++++||+|++++|+|+.+...++..|++++.+ +.. ++++.+|++.+
T Consensus        88 ~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~l~~~~~~~~d~~~l  166 (404)
T PTZ00376         88 EASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEY-RYYDPKTKGLDFDGM  166 (404)
T ss_pred             CCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeec-cccCcccCCcCHHHH
Confidence            553  4678888  48899999988875   567999999999999999999999999999999 873 34578899999


Q ss_pred             HHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--cc---c--cccCCcEEEE
Q 015890          156 EKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--KH---C--CVEGDHVVNL  225 (398)
Q Consensus       156 ~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~~---~--~~~~~~~i~~  225 (398)
                      ++.++.. ++.+++++++||||||.+++.+++++|+++|++||+++|+||+|  +.+++.  ..   .  ....++++++
T Consensus       167 ~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i  246 (404)
T PTZ00376        167 LEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVA  246 (404)
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence            9998632 22367778999999999999999999999999999999999999  665431  11   1  1123579999


Q ss_pred             cccccccCCCcceeEEE---EccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCCc---hH---HHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYI---AYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDL  292 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i---~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~  292 (398)
                      +|+||.|+++|+|+||+   +.+   +++++.+    .........+.+.++|.++..+++...   .+   .++.++.+
T Consensus       247 ~SfSK~~~~~GlRvG~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~  323 (404)
T PTZ00376        247 QSFSKNMGLYGERIGALHIVCAN---KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRI  323 (404)
T ss_pred             EeCCCcccccccccceEEEEeCC---HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998   455   6655443    332222334557789999999997631   22   44556778


Q ss_pred             HHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHH
Q 015890          293 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD  369 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~  369 (398)
                      +++++.+.+.|++++.   +.+..+++++|+|++++      .+++++|++++||.+.||.        ||+++..+.++
T Consensus       324 ~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~------~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~  389 (404)
T PTZ00376        324 QNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT------KEQVERLIEKYHIYLLDNG--------RISVAGLTSKN  389 (404)
T ss_pred             HHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC------HHHHHHHHHhCCEeecCCC--------eEEEeccCHHh
Confidence            8899999999988752   34557888999999874      4788889888899999971        99998668899


Q ss_pred             HHHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLEE  383 (398)
Q Consensus       370 ~~~~~~~l~~~~~~  383 (398)
                      +++++++|++++..
T Consensus       390 ~~~~~~~l~~~~~~  403 (404)
T PTZ00376        390 VDYVAEAIHDVVRN  403 (404)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999988753

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-43  Score=328.66  Aligned_cols=326  Identities=22%  Similarity=0.322  Sum_probs=269.8

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~  107 (398)
                      +.++++|+.|.|++++|+.+++++.+.+.......|++ .+..++|+.+++++    +.++ ++|++++|+++++..++.
T Consensus        25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~~~~   99 (356)
T PRK04870         25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQLLAL   99 (356)
T ss_pred             CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHHHHH
Confidence            46899999999999999999999999886544667855 67899999999998    4444 589999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|..+...++..|++++.+ +.++ ++.+|++.+++.+...+ +++|++++|+||||.+++.++++
T Consensus       100 ~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~-~~~~d~~~l~~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~  176 (356)
T PRK04870        100 ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGV-PLTA-DFTLDLPAMLAAIAEHR-PALVFLAYPNNPTGNLFDDADVE  176 (356)
T ss_pred             HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEe-cCCC-CCCCCHHHHHHHhhcCC-CCEEEEcCCCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999 8864 46789999999997533 59999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  265 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~  265 (398)
                      +|+++|   +.++|+||+|  +.+..........+++++++|+|| ++++|+|+||++++   +++++.+.....  .++
T Consensus       177 ~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~---~~~i~~~~~~~~--~~~  247 (356)
T PRK04870        177 RIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH---PAWIAELDKVRP--PYN  247 (356)
T ss_pred             HHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC---HHHHHHHHHccC--CCc
Confidence            999988   7799999999  443221112223468999999999 88999999999998   788888877653  456


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  345 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~  345 (398)
                      .+.+.|.++..+++. .+++++..+.++++++.+.+.|+.++++.+. +.+++|+|++++    +..++...+ +++||.
T Consensus       248 ~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~l-~~~gI~  320 (356)
T PRK04870        248 VNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP----DAAAVFDGL-KTRGVL  320 (356)
T ss_pred             CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC----CHHHHHHHH-HHCCEE
Confidence            788889888888875 4567788888899999999999887555554 555889999986    356677655 689999


Q ss_pred             EecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          346 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       346 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ++++..|+  .++++||+++.  .++.++++++|.++
T Consensus       321 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~  355 (356)
T PRK04870        321 VKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAA  355 (356)
T ss_pred             EEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHh
Confidence            99998874  36799999995  67788888887754

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=2.7e-43  Score=331.36  Aligned_cols=351  Identities=21%  Similarity=0.229  Sum_probs=272.1

Q ss_pred             ccCchHHHHHHHHHHc--CCCeEEcCCcc---CCCCCc--HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890           13 ETEMPIMVQIQELVRG--AKNAVSLAQGV---VYWQPP--KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus        13 ~~~~~~~~~~~~~~~~--g~~~~~l~~g~---~~~~~~--~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~   85 (398)
                      ....+.+..+.+....  ..+.++|+.|.   ++..+|  +.+.+++.+.+.+.....|++..|.+++|+++++++.+..
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~   86 (396)
T PRK09257          7 AAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGAD   86 (396)
T ss_pred             CCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCC
Confidence            3444455555544443  35789999996   333334  7888888887655445679999999999999999997765


Q ss_pred             C--CCCCcE--EEecChHHHHHHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHh
Q 015890           86 K--LYKSSV--MVTAGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKT  158 (398)
Q Consensus        86 ~--~~~~~v--~~~~g~t~a~~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~  158 (398)
                      +  +++++|  ++|+|+++|+..+++++  +++||+|++++|+|+++...++..|++++.+ +. +++++.+|++.+++.
T Consensus        87 ~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~  165 (396)
T PRK09257         87 SPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTY-PYYDAATKGLDFDAMLAD  165 (396)
T ss_pred             CcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEE-eccccccCccCHHHHHHH
Confidence            4  367777  99999999999998766  4899999999999999999999999999999 76 444567899999998


Q ss_pred             hccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccC-CCccc-----cccCCcEEEEcccc
Q 015890          159 LETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYD-GRKHC-----CVEGDHVVNLFSFS  229 (398)
Q Consensus       159 l~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~-~~~~~-----~~~~~~~i~~~s~s  229 (398)
                      ++.... .+++++++||||||.+++.+++++|+++|++||+++|+||+|  +.++ +....     ....+++++++|+|
T Consensus       166 ~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfS  245 (396)
T PRK09257        166 LSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFS  245 (396)
T ss_pred             HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcC
Confidence            873221 256666899999999999999999999999999999999999  5543 11111     11245799999999


Q ss_pred             cccCCCcceeEEEEc--cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHH
Q 015890          230 KAYGMMGWRVGYIAY--PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNRE  297 (398)
Q Consensus       230 K~~~~~G~r~G~i~~--~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~  297 (398)
                      |.|+++|+|+||+++  ++  ++    ++..+.........+++.+.|.++..++...      ++++++.++.++++++
T Consensus       246 K~~~~~GlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~  323 (396)
T PRK09257        246 KNFGLYGERVGALSVVAED--AEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQ  323 (396)
T ss_pred             CcCccccccceeEEEEeCC--HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988999999873  32  33    3333333333334556888899988888763      2456678888999999


Q ss_pred             HHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHH
Q 015890          298 IIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA  374 (398)
Q Consensus       298 ~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~  374 (398)
                      .+.+.|++.+   ...+..|++|+|+|++++      .+++.++++++||.+.|.      +  ||+++..+++++++++
T Consensus       324 ~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~  389 (396)
T PRK09257        324 LLVEALKAKGPSRDFDFIARQRGMFSYSGLT------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVA  389 (396)
T ss_pred             HHHHHHHhcCCCCCcccccccceEEEecCCC------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHH
Confidence            9999998874   246677889999999885      256677888999999873      2  9999877899999999


Q ss_pred             HHHHHH
Q 015890          375 DRLRRG  380 (398)
Q Consensus       375 ~~l~~~  380 (398)
                      ++|+++
T Consensus       390 ~~i~~~  395 (396)
T PRK09257        390 EAIAAV  395 (396)
T ss_pred             HHHHhh
Confidence            999875

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=5.9e-43  Score=324.35  Aligned_cols=329  Identities=18%  Similarity=0.239  Sum_probs=265.3

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+.++++|+.|.+++++|+.+++++.+.+..  ...|+ ..+..++|+.+++++    ++++++|++++|+++++..++.
T Consensus        18 ~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~   90 (356)
T PRK08056         18 SPDQLLDFSANINPLGMPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHH----QVPASWILAGNGETESIFAVVS   90 (356)
T ss_pred             ChhhEEEeccccCCCCCCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHH
Confidence            3578999999999999999999999887754  34674 456889999999987    7889999999999999999998


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ++ .+|+ ++++.|+|..+...++..|.+++.+ +.+ ++++.+| +++.+.+.++  +++|++++|+||||.+++.+++
T Consensus        91 ~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~-~~~~~~~~~~--~k~v~l~~p~NPTG~~~~~~~~  164 (356)
T PRK08056         91 GL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRY-SLREADGWQLT-DAILEALTPD--LDCLFLCTPNNPTGLLPERQLL  164 (356)
T ss_pred             Hh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEE-ecccccCCCcc-HHHHHhccCC--CCEEEEeCCcCCCCCCCCHHHH
Confidence            87 5665 7888999999999999999999999 775 3466666 4455566544  5899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCc--cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      ++|+++|+++++++|+||+|  +.+++..  ......+++++++|+||.||++|+|+||+++++  +++++.+.....  
T Consensus       165 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~--~~~~~~l~~~~~--  240 (356)
T PRK08056        165 QAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD--DAAVARMRRQQM--  240 (356)
T ss_pred             HHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence            99999999999999999999  5544321  112234688999999999999999999999854  567777765433  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      .++.+.+.+.++..+++. ..+.++.++.++++++++.+.|+++++..+.++ +++|+|++++.   +..++++.|+ ++
T Consensus       241 ~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~-~~  314 (356)
T PRK08056        241 PWSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER---PDIDLQRALL-TQ  314 (356)
T ss_pred             CCchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC---ChHHHHHHHH-HC
Confidence            566778888888888864 567777788899999999999988765555544 58999999874   3567888776 78


Q ss_pred             CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ||.+++|..|..  +++|||+++.  .++.+.++++|.+.+
T Consensus       315 gI~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~~l~~~~  353 (356)
T PRK08056        315 RILIRSCANYPGLDSRYYRVAIRS--AAENERLLAALRNVL  353 (356)
T ss_pred             CeEEEECCCCCCCCCCEEEEEEcC--HHHHHHHHHHHHHHH
Confidence            999999998742  4699999985  677777777776543

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=7.9e-43  Score=348.70  Aligned_cols=344  Identities=17%  Similarity=0.184  Sum_probs=276.9

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---CcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---~~v~~~~g~t~a~~~  104 (398)
                      +|.++++|+.|.|++++|+.+++++.+.+....   +  ..+.+++++++++++++.+|++.   ++|++++|+++++..
T Consensus       695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l  769 (1082)
T PLN02672        695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK  769 (1082)
T ss_pred             CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence            578999999999999999999999998775421   2  23456789999999999888764   389999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCC-CCCccCCC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPG-NPSGTYIP  182 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~-nptG~~~~  182 (398)
                      ++.+++++||.|+++.|+|+.|...++..|++++.+ +.+ ++++.+|++.+++.++..+ .++|++++|+ ||||.+++
T Consensus       770 ll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~V-pl~~e~gf~lD~d~Le~al~~~~-~~~I~L~nPnhNPTG~v~S  847 (1082)
T PLN02672        770 LVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRI-PTKSSDGFKLTAKTLASTLETVK-KPWVYISGPTINPTGLLYS  847 (1082)
T ss_pred             HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC-CCEEEEECcCCCCcCccCC
Confidence            999999999999999999999999999999999999 876 4579999999999997533 3688999997 99999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-----c----ccc----CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-----C----CVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-----~----~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      .+++++|+++|++||+++|+||+|  +.|++...     .    ...    ..++++++|+||.++++|+|+||+++++ 
T Consensus       848 ~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~-  926 (1082)
T PLN02672        848 NSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND-  926 (1082)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC-
Confidence            999999999999999999999999  66654321     0    000    1368999999999999999999999874 


Q ss_pred             cHHHHHHHHHhhccCC-CCcchHHHHHHHHHhc-CCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890          248 VEGFATQLLKVQDNIP-ICASIISQHLALYSLQ-TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  322 (398)
Q Consensus       248 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  322 (398)
                       +++++.+........ ...+..++.++..++. ...   .++.+.++.+.++++++.+.|++.+. .+..|++++|+|+
T Consensus       927 -~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi-~v~~PeGGFfLwl 1004 (1082)
T PLN02672        927 -SVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGW-DVLEPQGGISMVA 1004 (1082)
T ss_pred             -HHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-eEecCCcEEEEEE
Confidence             558888876533111 1222333333333332 112   35667777899999999999998865 7888998999999


Q ss_pred             eCCCC----------------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          323 RLPEK----------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       323 ~~~~~----------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +++..                ..+..+++++|+++.||.+.||+.|+.++++||+++. +++++++++++|+++..
T Consensus      1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence            76310                1357789999987789999999988888999999996 88899999999998554

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.7e-43  Score=324.39  Aligned_cols=335  Identities=23%  Similarity=0.280  Sum_probs=274.0

Q ss_pred             cCC-CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           28 GAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        28 ~g~-~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      .|. .+++|+.|++++++|+.+.+++.+....  ...|++. +..++|+++++++    ++++++|++++|+++++..++
T Consensus        29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~~  101 (369)
T PRK08153         29 RGRPFRARIGANESGFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLIV  101 (369)
T ss_pred             cCCcceeEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence            444 4679999999999999999999887643  4568554 5789999999987    688899999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .+++++||.|+++.|+|+.+...++..|.+++.+ |.+.+  .+|++.+++.+.... ++++++++|+||||.+++.+++
T Consensus       102 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-p~~~~--~~~~~~l~~~~~~~~-~~~i~l~~P~NPtG~~~~~~~l  177 (369)
T PRK08153        102 RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTV-PYRDD--REDLDALLDAARREN-APLVYLANPDNPMGSWHPAADI  177 (369)
T ss_pred             HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEe-eCCCC--CCCHHHHHHHhcccC-CcEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999998888999999998 77544  368888887775332 5899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      .+++++|+ +++++|+||+|  +.+++.... ....+++++++||||.||++|+|+||++++   +++++.+.....  .
T Consensus       178 ~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~---~~~~~~l~~~~~--~  251 (369)
T PRK08153        178 VAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA---PGTIKAFDKVRN--H  251 (369)
T ss_pred             HHHHHhCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC---HHHHHHHHHhhc--C
Confidence            99999887 49999999999  655442111 112468899999999999999999999998   788888877664  4


Q ss_pred             CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      ++.+.+.|.++..+++. .+++++..+.++++++.+.+.|++.+. .+. +.+++|+|++++.......++.++++ ++|
T Consensus       252 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~-~~G  327 (369)
T PRK08153        252 FGMNRIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARANGL-TPL-PSATNFVAIDCGRDGAFARAVLDGLI-ARD  327 (369)
T ss_pred             CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCcCcEEEEECCCCcccHHHHHHHHH-HCC
Confidence            67899999999999975 577788888899999999999988765 444 56689999998632234667777775 789


Q ss_pred             eEEe-cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          344 VVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       344 i~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      |.++ |+.. ..++++|++++.  .++++.++++|.+++....+
T Consensus       328 i~v~~p~~~-~~~~~iRis~~~--~~~~~~~~~al~~~~~~~~~  368 (369)
T PRK08153        328 IFVRMPGVA-PLDRCIRVSCGP--DEELDLFAEALPEALEAARK  368 (369)
T ss_pred             eEEeeCCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHHhhc
Confidence            9995 5542 245799999994  78999999999988875443

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.6e-42  Score=320.13  Aligned_cols=325  Identities=24%  Similarity=0.380  Sum_probs=268.2

Q ss_pred             HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCCcEEEecChHHHH
Q 015890           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKSSVMVTAGANQAF  102 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~g~t~a~  102 (398)
                      ...+++.++|+.|.|..++++.+.+++.+...   ...|++..|..++|++++++++++++   +++++|++|+|+++++
T Consensus        17 ~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i   93 (357)
T TIGR03539        17 ASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV   93 (357)
T ss_pred             hhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence            34677899999998887778888888876542   35698888999999999999988754   6689999999999999


Q ss_pred             HHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      ..++..+ +++||.|+++.|+|+++...++..|++++.+ +        +++.++   .++  +++|++++|+||||.++
T Consensus        94 ~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~--------~~~~l~---~~~--~~~v~~~~p~NPtG~~~  159 (357)
T TIGR03539        94 AWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAA-D--------DPTELD---PVG--PDLIWLNSPGNPTGRVL  159 (357)
T ss_pred             HHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEecc-C--------ChhhcC---ccC--ccEEEEeCCCCCcCccC
Confidence            9998888 7999999999999999999899999998876 3        222222   123  59999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-------cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +.+++++|+++|+++|+++|+||+|  +.+++......       ..+++++++|+||.|+++|+|+||++++   ++++
T Consensus       160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~---~~~~  236 (357)
T TIGR03539       160 SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGD---PALV  236 (357)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecC---HHHH
Confidence            9999999999999999999999999  66554322211       2357899999999999999999999988   7888


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +.+........++++.+.|.++..+|+. ..+.++.++.++++++.+.+.|++.+ ..+..+.+++|+|+.++.   +..
T Consensus       237 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~~~~~~~~~---~~~  311 (357)
T TIGR03539       237 AELLTVRKHAGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATRGE---DAW  311 (357)
T ss_pred             HHHHHHHhhcccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccEEEEEECCC---CHH
Confidence            8887776655677889999999999975 56677788888899999999998876 477778889999998853   456


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      ++...| .++||.+.||..|+.  +++|||+++. +++++++++++|
T Consensus       312 ~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l  356 (357)
T TIGR03539       312 DTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL  356 (357)
T ss_pred             HHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence            677766 589999999987753  5799999997 678899888876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=2.1e-42  Score=327.69  Aligned_cols=356  Identities=18%  Similarity=0.281  Sum_probs=269.8

Q ss_pred             HHHHHHHHHcCCCeEEcCCccCCCCCc--HHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC
Q 015890           19 MVQIQELVRGAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKS   90 (398)
Q Consensus        19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~--~~v~~a~~~~~~~~----~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~   90 (398)
                      +.+..+.. ..++.++|+.|.+...++  +.+.+++.+.+...    ....|++..|..++|+++++++++.+|  ++++
T Consensus        20 ~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~   98 (416)
T PRK09440         20 MDDLNDGL-RTPGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQ   98 (416)
T ss_pred             HHHHHHHh-cCCCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh
Confidence            34443333 336789999998875332  45566666655432    235798889999999999999988765  5788


Q ss_pred             cEEEecChHHHHHHHHHHhcc-----CCCEEEE-eCCCCcChhhHHHhcCc----EEEEeccCCCC--CCCCChHHHHHh
Q 015890           91 SVMVTAGANQAFVNIVLTLCD-----AGDSVVM-FAPYYFNSYMSFQMTGV----THILVGPCSSK--TLHPDADWLEKT  158 (398)
Q Consensus        91 ~v~~~~g~t~a~~~~~~~l~~-----~gd~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~~~~d~e~l~~~  158 (398)
                      +|++|+|+++++..++.++++     +||.|++ +.|+|++|...+...+.    .+..+ +.+.+  ++.+|++.++  
T Consensus        99 ~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~--  175 (416)
T PRK09440         99 NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIE-LLPEGQFKYHVDFEHLH--  175 (416)
T ss_pred             hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccc-cccccccccCCCHHHcc--
Confidence            999999999999999999985     5899999 69999999876654442    11222 33332  3568988887  


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc---ccccCCcEEEEcccccccCC
Q 015890          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH---CCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~---~~~~~~~~i~~~s~sK~~~~  234 (398)
                      +..+  ++++++++|+||||.+++.+++++|+++|+++|+++|+||+| ..+.....   .....+++++++|+||. ++
T Consensus       176 ~~~~--~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~  252 (416)
T PRK09440        176 IDED--TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GL  252 (416)
T ss_pred             cCCC--ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CC
Confidence            3333  599999999999999999999999999999999999999999 22211111   11124689999999996 88


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHHHHHHHHhccC-CC--
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSPL-GE--  308 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~l~~~-~~--  308 (398)
                      ||+|+||++++   +++++.+.........+++.+.|.++..+++.+.  .+..+ .++.++++++.+.+.|.+. +.  
T Consensus       253 pGlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~  329 (416)
T PRK09440        253 PGVRCGIVIAD---EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEP  329 (416)
T ss_pred             CcceEEEEeCC---HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            99999999998   8899998887766667889999999999998643  22333 4555677777777777653 21  


Q ss_pred             CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ..+..|++++|+|++++....+..++...+ .++||.+.||+.|+.         .+++||+++. +.+++++++++|.+
T Consensus       330 ~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~  407 (416)
T PRK09440        330 CLIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAE  407 (416)
T ss_pred             eEEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHH
Confidence            355678889999999986323567788766 589999999988742         2589999986 78999999999999


Q ss_pred             HHHHHhc
Q 015890          380 GLEELVK  386 (398)
Q Consensus       380 ~~~~~~~  386 (398)
                      ++++..+
T Consensus       408 ~~~~~~~  414 (416)
T PRK09440        408 EVEKAYA  414 (416)
T ss_pred             HHHHHhh
Confidence            9887554

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-42  Score=323.59  Aligned_cols=328  Identities=23%  Similarity=0.323  Sum_probs=268.4

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+.++++|+.|.|++.+++.+.+++.+....  ...|++..| .++|+.+++++    ++++++|++|+|+++++..++.
T Consensus        34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~  106 (371)
T PRK05166         34 GVPRIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAVICR  106 (371)
T ss_pred             CCcceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence            4568999999999998899999998875433  567877666 48999999987    6788999999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|+.+...++..|.+++.+ +.+.+ +.+|++++++.+++++  +++++++|+||||.+++.++++
T Consensus       107 ~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~  182 (371)
T PRK05166        107 AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERV-TVTPD-LGFDLDALCAAVARAP--RMLMFSNPSNPVGSWLTADQLA  182 (371)
T ss_pred             HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999998 77643 4689999999998765  8999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCcccc-----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      +|+++|++ ++++|+||+|  +.+++.....     ...+++++++|+||.||++|+|+||+++++  +++++.+.....
T Consensus       183 ~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~--~~l~~~~~~~~~  259 (371)
T PRK05166        183 RVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD--PELVGLLDRVRT  259 (371)
T ss_pred             HHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC--HHHHHHHHHhcc
Confidence            99999874 8899999999  5543321111     123578999999999999999999987643  778888776553


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH  340 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  340 (398)
                        .++.+.+.|.++..++.. .+++++..+.+.++++.+.+.|++.+. .+. +.+++|+|++++.   +..++++.++ 
T Consensus       260 --~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-p~~g~fl~~~~~~---~~~~l~~~l~-  330 (371)
T PRK05166        260 --PFNVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGY-RIA-PSRANFLFFDARR---PASAVAEALL-  330 (371)
T ss_pred             --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-eeC-CCcCCEEEEeCCC---CHHHHHHHHH-
Confidence              466788899888888875 577888888899999999999998864 554 4558999999763   4678888886 


Q ss_pred             hcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          341 RHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       341 ~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ++||.++||..++.+++|||+++.  .++.+++.+.|+..
T Consensus       331 ~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i  368 (371)
T PRK05166        331 RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKV  368 (371)
T ss_pred             HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHH
Confidence            689999999877678999999996  45555555555543

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=2.3e-43  Score=329.23  Aligned_cols=338  Identities=29%  Similarity=0.479  Sum_probs=281.5

Q ss_pred             CeEEcCCccCCCC----CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCC-cEEEecChHHHH
Q 015890           31 NAVSLAQGVVYWQ----PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAF  102 (398)
Q Consensus        31 ~~~~l~~g~~~~~----~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~-~v~~~~g~t~a~  102 (398)
                      +.|+|+.|++...    ++++.++++.+ .........|++..|.+++|+++++++.+..+  .+++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            6899999998886    66777777665 33333478899999999999999999986554  4577 899999999999


Q ss_pred             HHHHHHh-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccC---C-CCeEEEEeCCCCC
Q 015890          103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK---P-TPKLVSVVNPGNP  176 (398)
Q Consensus       103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~---~-~~~~v~i~~p~np  176 (398)
                      ..++..+ .++||+|+++.|+|+.+...++..|.+++.+ +.+ +.++.+|++.|++.+++.   . ++++|++++|+||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP  160 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPV-PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP  160 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEE-EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeec-cccccccccccccccccccccccccccccceeeecccccc
Confidence            9999999 7899999999999999999999999999988 654 345788999999999862   1 2589999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-----cccccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-----~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      ||.+++.+++++|+++|+++|+++|+||+|  +.+....     .......+++++.|+||.||++|+|+||++++   +
T Consensus       161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~---~  237 (363)
T PF00155_consen  161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP---P  237 (363)
T ss_dssp             TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE---H
T ss_pred             cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch---h
Confidence            999999999999999999999999999999  5554321     22223456899999999999999999999998   8


Q ss_pred             HHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890          250 GFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  326 (398)
Q Consensus       250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ++++.+.........  +.+.+.++..++....   .++++.++.++++++.+.+.|++.+. .+..+++++|+|+.++.
T Consensus       238 ~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~  314 (363)
T PF00155_consen  238 ELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGI-TVLPPEAGFFLWVRLDP  314 (363)
T ss_dssp             HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-EEEHHSBSSEEEEEESH
T ss_pred             hhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhh-heeeccCccEEEEEccc
Confidence            899998877764333  8888888888887622   27888999999999999999988854 77777789999999875


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      .  +..+++++|+++.||.+.||..|+.+++||++++..+++++++++++|
T Consensus       315 ~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  315 N--DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             H--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             c--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            3  567899999866699999999998899999999547899999999876

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.6e-42  Score=317.18  Aligned_cols=325  Identities=24%  Similarity=0.344  Sum_probs=261.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      ...++|+.|.+++++|+.+++++.+.+.......|+ ..+..++|+++++++    ++++++|++++|+++++..++.++
T Consensus        22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~~~l   96 (351)
T PRK14807         22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIMLAF   96 (351)
T ss_pred             CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHHHHh
Confidence            457999999999999999999999877654456785 445688999999987    678899999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +++||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.++... +++|++++|+||||.+++.+++   
T Consensus        97 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~-~k~v~l~~p~NPtG~~~~~~~l---  170 (351)
T PRK14807         97 INKGDVVIYPHPSFAMYSVYSKIAGAVEIPV-KLKED-YTYDVGSFIKVIEKYQ-PKLVFLCNPNNPTGSVIEREDI---  170 (351)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHHhhccC-CCEEEEeCCCCCCCCCCCHHHH---
Confidence            9999999999999999988889999999999 77643 5789999999997532 5999999999999999995555   


Q ss_pred             HHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890          190 SDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  267 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  267 (398)
                      .++|++++.++|+||+|..+.+...  .....+++++++|+||.+|++|+|+||++++   +++++.+.....  .++.+
T Consensus       171 ~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~---~~~~~~~~~~~~--~~~~~  245 (351)
T PRK14807        171 IKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN---ENILKYLNLVKS--PYNIN  245 (351)
T ss_pred             HHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecC---HHHHHHHHHccC--CCCcC
Confidence            5555566788999999922222211  1223578999999999999999999999998   889888876654  45678


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  347 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  347 (398)
                      .+.|.++..+++.  .++.+..+.+.++++.+.+.|++.+++.+. +.+++|+|++++    +..++++.|+ ++||.++
T Consensus       246 ~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~----~~~~~~~~l~-~~gV~v~  317 (351)
T PRK14807        246 SLSQVIALKVLRT--GVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK----DADYVYQGLL-ERGILVR  317 (351)
T ss_pred             HHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC----CHHHHHHHHH-HCCEEEE
Confidence            8999999999874  456777778888888899999876555655 445889999986    3566777665 7899998


Q ss_pred             cCCC-CCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          348 PGGA-CGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       348 ~g~~-~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ++.. ++.++++||+++.  .++.+++++.|+++
T Consensus       318 ~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~  349 (351)
T PRK14807        318 DFSKVEGLEGALRITVSS--CEANDYLINGLKEL  349 (351)
T ss_pred             ECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHh
Confidence            8653 3457899999995  56677777777654

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-42  Score=321.95  Aligned_cols=327  Identities=20%  Similarity=0.285  Sum_probs=267.3

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +.++++|+.|.+++++++.+.+++.+.+.+. ...|+ ..+..++|+++++++    ++++++|++|+|+++++..++++
T Consensus        23 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~~y~-~~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~~~~   96 (353)
T PRK05387         23 LAKLIKLNTNENPYPPSPKVLEAIRAALGDD-LRLYP-DPNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHAFLA   96 (353)
T ss_pred             ccceeeccCCCCCCCCCHHHHHHHHHHhhhh-hhcCC-CCcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHH
Confidence            3679999999999988999999998876643 45684 446689999999998    67899999999999999999999


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ++++||+|+++.|+|+.+...++..|++++.+ +.++ ++.+|++.+++    .  .+++++++||||||.+++.+++++
T Consensus        97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~----~--~~~v~~~~P~NPtG~~~~~~~~~~  168 (353)
T PRK05387         97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEI-PLDD-DFSIDVEDYLR----P--NGGIIFPNPNAPTGIALPLAEIER  168 (353)
T ss_pred             hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEe-ecCC-CCCCCHHHHHh----c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            99999999999999999998899999999998 7764 35789988863    2  378899999999999999888888


Q ss_pred             HHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CCC
Q 015890          189 ISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PIC  265 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~  265 (398)
                      |+++++  ++++|+||+|..+.+...  .....+++++++|+||.||++|+|+||++++   +++++.+....... .++
T Consensus       169 l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~---~~~~~~l~~~~~~~~~~~  243 (353)
T PRK05387        169 ILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH---PELIEALNRVKNSFNSYP  243 (353)
T ss_pred             HHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC---HHHHHHHHHhhccCCCCC
Confidence            887643  899999999933333221  1223567899999999999999999999998   78888887776432 467


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  345 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~  345 (398)
                      .+.+.|.++..++.. .+++++.++.+.++++.+.+.|++.+. .+. +.+++|+|+.++.  .+..++++.|. ++||.
T Consensus       244 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~  317 (353)
T PRK05387        244 LDRLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEALGF-EVL-PSKANFVFARHPS--HDAAELAAKLR-ERGII  317 (353)
T ss_pred             cCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eEC-CCcCcEEEEECCC--CCHHHHHHHHH-HCCEE
Confidence            889999999888875 567788888899999999999988864 554 4558899999873  35778888775 88999


Q ss_pred             EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       346 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +++......++++|++++.  .+++++++++|.+++.
T Consensus       318 v~~~~~~~~~~~iRis~~~--~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        318 VRHFNKPRIDQFLRITIGT--DEEMEALVDALKEILA  352 (353)
T ss_pred             EEECCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHhh
Confidence            9865433346799999984  6889999999987653

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=4.7e-42  Score=320.45  Aligned_cols=330  Identities=23%  Similarity=0.332  Sum_probs=273.3

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ++.++++|+.|.++++++|.+++++.+....  ...|++. ...++|+.+++++    ++++++|++|+|+++++..++.
T Consensus        30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~  102 (367)
T PRK02731         30 GIADIIKLASNENPLGPSPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILELLAR  102 (367)
T ss_pred             CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence            6788999999999998899999999887754  4678544 3478999999987    6778899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|..+...++..|.+++.+ +.+  ++.+|++.+++.++++  +++|++++|+||||.+++.+++.
T Consensus       103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~l~~~~~~~--~~~v~l~~p~nptG~~~~~~~l~  177 (367)
T PRK02731        103 AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEV-PAK--DYGHDLDAMLAAVTPR--TRLVFIANPNNPTGTYLPAEEVE  177 (367)
T ss_pred             HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEe-ccc--CCCCCHHHHHHHhCCC--CcEEEEeCCCCCCCcCCCHHHHH
Confidence            999999999999999988888888999999988 763  3567999999999865  49999999999999999988888


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      ++++.|+ +|+++|+||+|  +.+.+....    ....+++++++|+||.||++|+|+||++++   +++++.+..... 
T Consensus       178 ~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~---~~~~~~l~~~~~-  252 (367)
T PRK02731        178 RFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP---PEIIDALNRVRQ-  252 (367)
T ss_pred             HHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC---HHHHHHHHHccC-
Confidence            8888775 59999999999  444332111    112467899999999999999999999999   788888877654 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       +++.+.+.|.++..+++. ..++++..+.++++++.+.+.|++.+. .+. +.+++|+|+.++.. .+..++++.|. +
T Consensus       253 -~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~g~~~~i~~~~~-~~~~~~~~~L~-~  326 (367)
T PRK02731        253 -PFNVNSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAELGL-EYI-PSVGNFILVDFDDG-KDAAEAYQALL-K  326 (367)
T ss_pred             -CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCCceEEEEECCCC-CCHHHHHHHHH-H
Confidence             456788999999999975 567788888888999999999988754 555 44589999999543 36778888775 7


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +||.++++..|+.+++||++++.  .+++++++++|+++++
T Consensus       327 ~gI~v~~~~~~~~~~~iRis~~~--~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        327 RGVIVRPVAGYGLPNALRITIGT--EEENRRFLAALKEFLA  365 (367)
T ss_pred             CCEEEEeCCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHh
Confidence            89999999888667899999984  7888999998888764

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=6.8e-42  Score=317.90  Aligned_cols=309  Identities=17%  Similarity=0.202  Sum_probs=249.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.+++++|+.+.+++.+.+..  ...|++. +..++|+++++++    ++++++|++|+|+++++..++.++
T Consensus        22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~~~~l   94 (360)
T PRK07392         22 DAILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWAGREL   94 (360)
T ss_pred             ccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHHh
Confidence            46899999999999999999999887654  5678654 4678999999998    688999999999999999999887


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCC-C---CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-L---HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                      . +||+|+++.|+|..+...++..|++++.+ +.+.++ +   ..+++.+++... .  ++++++++||||||.+++.+ 
T Consensus        95 ~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~l~nP~NPTG~~~~~~-  168 (360)
T PRK07392         95 A-QLRAVYLITPAFGDYRRALRAFGATVKEL-PLPLDQPSPGLTLRLQTLPPQLT-P--NDGLLLNNPHNPTGKLWSRE-  168 (360)
T ss_pred             C-CCCeEEEECCCcHHHHHHHHHcCCeEEEE-ecccccCCcccccCHHHHHHhcc-C--CCEEEEeCCCCCCCCCcCHH-
Confidence            5 67899999999999999999999999999 876543 2   245666655432 2  58999999999999999955 


Q ss_pred             HHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890          186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                        +|.++++++++ +|+||+|  |.+++....    ....+++++++|+||.||++|+|+||++++   +++++.+....
T Consensus       169 --~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~---~~~~~~~~~~~  242 (360)
T PRK07392        169 --AILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH---PDRLQRWQQWR  242 (360)
T ss_pred             --HHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC---HHHHHHHHhhC
Confidence              45556667775 6779999  655442221    123468999999999999999999999998   78888876655


Q ss_pred             ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890          260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      .  .++.+.+.|.++..+++. ..+.++..+.++++++.+.+.|+.++++.+.. .+++|+|++++.   +..++..+++
T Consensus       243 ~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~---~~~~l~~~ll  315 (360)
T PRK07392        243 D--PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG---SALQLQEKLL  315 (360)
T ss_pred             C--CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC---CHHHHHHHHH
Confidence            3  567899999999999985 45666666778888999999998876655554 568999999864   5678888877


Q ss_pred             HhcCeEEecCCCCCC--CCeEEEEecC
Q 015890          340 HRHGVVVIPGGACGC--RGHLRISFGG  364 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~--~~~iRi~~~~  364 (398)
                      +++||.+.||..|+.  ++++||+++.
T Consensus       316 ~~~gv~v~pg~~f~~~~~~~iRi~~~~  342 (360)
T PRK07392        316 QQHRILIRDCLSFPELGDRYFRVAVRT  342 (360)
T ss_pred             hhCCEEEEeCCCCCCCCCCEEEEEeCC
Confidence            788999999998863  5799999997

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=4.5e-42  Score=319.04  Aligned_cols=322  Identities=21%  Similarity=0.266  Sum_probs=261.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      ++.++|+.|.+++++||.+++++.+.+..  ...|++. +..++|+.+++++    ++++++|++|+|+++++..++.++
T Consensus        43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~~~~l  115 (370)
T PRK09105         43 EGAVFLNANECPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYAVLAF  115 (370)
T ss_pred             CCcEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHHHHHH
Confidence            46899999999999999999999887654  3457544 4788999998876    788999999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +++||+|++++|+|+.+...++..|++++.+ +.++ ++.+|++.+++. .++  ++++++++||||||.+++.++++++
T Consensus       116 ~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~-~~~--~~~v~l~nP~NPTG~~~~~~~l~~l  190 (370)
T PRK09105        116 TSPTAGLVTADPTYEAGWRAADAQGAPVAKV-PLRA-DGAHDVKAMLAA-DPN--AGLIYICNPNNPTGTVTPRADIEWL  190 (370)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHhc-CCC--CCEEEEeCCCCCCCcCcCHHHHHHH
Confidence            9999999999999999999999999999998 7764 457899999876 333  4899999999999999999999999


Q ss_pred             HHHHHHcCCEEEEeeceeccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890          190 SDLCKAAGSWLVVDNTYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  266 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~  266 (398)
                      ++.++ +++++|+||+|..+...+..   ....+++++++|+||.||++|+|+||++++   +++++.+... .  .+..
T Consensus       191 ~~~~~-~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~---~~~i~~l~~~-~--~~~~  263 (370)
T PRK09105        191 LANKP-AGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR---PDLLAKLARF-G--HNPL  263 (370)
T ss_pred             HHhCC-CCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC---HHHHHHHHhc-C--CCCc
Confidence            98764 58999999999323222111   113568999999999999999999999998   7888888765 2  4557


Q ss_pred             chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      +.+.+.++..++.. .+++++..+.+.++++.+.+.|++.+. .+..+. ++|++++++   .+..++++.|+ ++||.+
T Consensus       264 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~~f~~~~~~---~~~~~l~~~L~-~~gI~v  336 (370)
T PRK09105        264 PVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQ-ANCFMVDVK---RPAKAVADAMA-KQGVFI  336 (370)
T ss_pred             CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCC-CcEEEEeCC---CCHHHHHHHHH-HCCcEE
Confidence            88888888888875 578888888999999999999998764 666666 555567775   25678888887 679999


Q ss_pred             ecCCCCC-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          347 IPGGACG-CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       347 ~~g~~~~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ..  .|. .++++|++++.  ++++++++++|.+.+
T Consensus       337 ~~--~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~  368 (370)
T PRK09105        337 GR--SWPIWPNWVRVTVGS--EEEMAAFRSAFAKVM  368 (370)
T ss_pred             ec--CCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence            33  343 46899999994  677777777777654

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-41  Score=317.53  Aligned_cols=329  Identities=24%  Similarity=0.324  Sum_probs=266.2

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~  106 (398)
                      ..++|+.|.|++++|+.+.+++.+.+..  .....| +..+..++|+++++++++.++  +++++|++|+|+++++..++
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~  105 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL  105 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence            5799999999999999999999988653  235678 456889999999999988764  57899999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .+++++||.|+++.|+|+.+...++..|.+++.+ +.+ +++.+|++.+++.++..+ ++++++++|+||||.+++.+++
T Consensus       106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~-~~~i~l~~p~NPtG~~~~~~~l  182 (368)
T PRK03317        106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEG-PRA-ADFTLDVDAAVAAIAEHR-PDVVFLTSPNNPTGTALPLDDV  182 (368)
T ss_pred             HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEc-ccC-CCCCCCHHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHH
Confidence            9999999999999999999999999999998888 654 346789999999997433 5899999999999999997777


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      ++|+++|   ++++|+||+|  +.+.+.....   ...+++++++|+||.||++|+|+||++++   +++++.+..... 
T Consensus       183 ~~l~~~~---~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~---~~~~~~l~~~~~-  255 (368)
T PRK03317        183 EAILDAA---PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA---PAVVDALRLVRL-  255 (368)
T ss_pred             HHHHHHC---CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC---HHHHHHHHhcCC-
Confidence            7776655   7999999999  6554432211   12357899999999999999999999998   889888876653 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       +++.+.+.+.++..+++. .+...+..+.+.++++.+.+.|++.+. .+..+.+++++|..++    +..++...++ +
T Consensus       256 -~~~~s~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~----~~~~~~~~l~-~  327 (368)
T PRK03317        256 -PYHLSAVTQAAARAALRH-ADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA----DRHAVWQGLL-D  327 (368)
T ss_pred             -CCCCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC----CHHHHHHHHH-H
Confidence             567889999999999975 344455666778888889999988764 6666776666665553    4567777665 7


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +||.+++.   +.++++||+++.  .+++++++++|.+++..
T Consensus       328 ~Gv~v~~~---~~~~~iRi~~~~--~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        328 RGVLIRDV---GIPGWLRVTIGT--PEENDAFLAALAEVLAT  364 (368)
T ss_pred             CCEEEEeC---CCCCeEEEecCC--HHHHHHHHHHHHHHHHH
Confidence            89999874   346899999984  67888888888877643

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.1e-42  Score=319.67  Aligned_cols=317  Identities=23%  Similarity=0.316  Sum_probs=257.0

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      ...++|+.|.+++++++.+.        ......| |.....++++.+++++    |+++++|++|+|+++++..++.++
T Consensus        28 ~~~~~l~~Nenp~~~~~~~~--------~~~~~~Y-p~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~~~~   94 (351)
T PRK01688         28 NGDVWLNANEYPTAVEFQLT--------QQTLNRY-PECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLIRAF   94 (351)
T ss_pred             CCceEecCCCCCCCCChhhc--------ccccccC-CCCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHHh
Confidence            45699999999998887531        1124567 5555567777777765    789999999999999999999999


Q ss_pred             ccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 ~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      +++| |+|+++.|+|..|...++..|++++.+ +.++ ++.+|++.+++.++ +  +++|++++||||||.+++.+++++
T Consensus        95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v-~~~~-~~~~d~~~l~~~~~-~--~~lv~l~nPnNPTG~~~~~~~l~~  169 (351)
T PRK01688         95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTV-PTLD-NWQLDLPAIADNLD-G--VKVVYVCSPNNPTGNLINPQDLRT  169 (351)
T ss_pred             cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEe-ecCC-CCCCCHHHHHHhcc-C--CcEEEEeCCCCCCCCCCCHHHHHH
Confidence            9887 899999999999999999999999999 7765 47889999999873 3  599999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeeceeccCCCcc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890          189 ISDLCKAAGSWLVVDNTYFMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  265 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~~~~~~~~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~  265 (398)
                      |++.|++ +.++|+||+|..+.....   .....+++++++|+||.||++|+|+||++++   +++++.+.+...  +++
T Consensus       170 l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~---~~~i~~l~~~~~--~~~  243 (351)
T PRK01688        170 LLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN---EEVINLLLKVIA--PYP  243 (351)
T ss_pred             HHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC---HHHHHHHHhccC--CCC
Confidence            9999876 689999999933322111   1123578999999999999999999999998   889988887654  566


Q ss_pred             cchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          266 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      .+.+.+.++.++|+.. .+++++..+.+.++++++.+.|++++++....+.+++|+|++++    +..++.+.|+ ++||
T Consensus       244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----~~~~l~~~L~-~~gi  318 (351)
T PRK01688        244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----ASSAVFKSLW-DQGI  318 (351)
T ss_pred             CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HCCe
Confidence            7788888888888752 35778888888889999999999886654344556999999886    3677888776 8899


Q ss_pred             EEecCCCC-CCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          345 VVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       345 ~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      .++++..+ +.++++||+++.  .+++++++++|
T Consensus       319 ~vr~~~~~~~~~~~iRis~~~--~~e~~~l~~al  350 (351)
T PRK01688        319 ILRDQNKQPGLSNCLRITIGT--REECQRVIDAL  350 (351)
T ss_pred             EEEECCCcCCCCCeEEEeCCC--HHHHHHHHHhh
Confidence            99987654 557899999994  68888888776

>PLN02368 alanine transaminase

Probab=100.00  E-value=1.3e-41  Score=317.26  Aligned_cols=313  Identities=19%  Similarity=0.331  Sum_probs=250.0

Q ss_pred             HhHHhhccCch----HHHHHHHHHHcCCCeEEcCCccCC--------C----------------------CCcHHHHHHH
Q 015890            7 LAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVY--------W----------------------QPPKMAMEKV   52 (398)
Q Consensus         7 ~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~g~~~--------~----------------------~~~~~v~~a~   52 (398)
                      +++|+.....+    ...+..++.++|.++++|+.|.|+        +                      .+++.+.+++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~   90 (407)
T PLN02368         11 LNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK   90 (407)
T ss_pred             cCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence            45555533322    233445556678999999999986        2                      1344444444


Q ss_pred             HHhhc--CCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChh
Q 015890           53 KELVW--DPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSY  127 (398)
Q Consensus        53 ~~~~~--~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~  127 (398)
                       ..+.  ......|++..|..++|+++++++.+.+|  +++++|++|+|+++++..++.+++ ++||+|+++.|+|+.+.
T Consensus        91 -~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~  169 (407)
T PLN02368         91 -HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS  169 (407)
T ss_pred             -HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence             4432  23367899899999999999999988776  568899999999999999999987 79999999999999999


Q ss_pred             hHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          128 MSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       128 ~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      ..++..|.+++.+ +.++ ++|.+|++.+++.+++.    .+++++++++|+||||.+++.+++++|+++|++||+++|+
T Consensus       170 ~~~~~~g~~~v~v-~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~  248 (407)
T PLN02368        170 ATISLLGGTLVPY-YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG  248 (407)
T ss_pred             HHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence            9999999999999 7764 46889999999998731    1359999999999999999999999999999999999999


Q ss_pred             eece--eccCCC-cc-cc------c-----cCCcEEEEccccccc-CCCcceeEEEEc---cCCcHHHHHHHHHhhccCC
Q 015890          203 DNTY--FMYDGR-KH-CC------V-----EGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       203 De~~--~~~~~~-~~-~~------~-----~~~~~i~~~s~sK~~-~~~G~r~G~i~~---~~~~~~~~~~l~~~~~~~~  263 (398)
                      ||+|  +.|++. +. +.      .     ..+++++++|+||.| |++|+|+||+++   +   +++++.+..... ..
T Consensus       249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~---~~li~~~~~~~~-~~  324 (407)
T PLN02368        249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP---PKTVEEIYKVAS-IA  324 (407)
T ss_pred             EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC---HHHHHHHHHHhc-cc
Confidence            9999  777553 21 11      0     134799999999998 899999999984   5   788888887643 46


Q ss_pred             CCcchHHHHHHHHHhcCCc-------hHH---HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890          264 ICASIISQHLALYSLQTGP-------EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  325 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~-------~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                      ++.+.++|.++.+++....       .+.   +++.+.++++++.+.+.|++++++.+..|+|++|+|++++
T Consensus       325 ~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~  396 (407)
T PLN02368        325 LSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK  396 (407)
T ss_pred             CCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence            7789999999999997421       233   3457888999999999999987777888999999998765

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=1.1e-41  Score=315.44  Aligned_cols=323  Identities=22%  Similarity=0.355  Sum_probs=266.8

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.+++++||.+++++.++...  ...|++..+ .++|+.+++++    ++++++|++++|+++++..++.++
T Consensus        19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~~~~l   91 (346)
T TIGR01141        19 KEVIKLNSNENPFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELLIRAF   91 (346)
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHHHHHh
Confidence            57999999999999999999999987643  456755544 88999999998    577889999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +++||+|+++.|+|+.+...++..|.+++.+ +.+++ +.+|++.+++.+++++  ++|++++|+||||.+++.+++.++
T Consensus        92 ~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~~~~~~~l  167 (346)
T TIGR01141        92 LEPGDAVLVPPPTYSMYEISAKIHGAEVVKV-PLDED-GQLDLEDILVAIDDKP--KLVFLCSPNNPTGNLLSRSDIEAV  167 (346)
T ss_pred             cCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHHH
Confidence            9999999999999988888889999999999 87665 5689999999886654  999999999999999998888888


Q ss_pred             HHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890          190 SDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  266 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~  266 (398)
                      ++.|+ +|+++|+|++|  +...+... .....+++++++|+||++|++|+|+||++++   +++++.+.....  .++.
T Consensus       168 ~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~~~~  241 (346)
T TIGR01141       168 LERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN---AEIIDALNKVRA--PFNL  241 (346)
T ss_pred             HHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC---HHHHHHHHhccC--CCCC
Confidence            88776 69999999999  44322111 1112356889999999999899999999998   788888876654  4667


Q ss_pred             chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      +.++|.++..+++. ..++.+..+.++++++++.+.|++++++.+. +.+++|+|+.++.   +..++.+.|. ++||.+
T Consensus       242 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~---~~~~~~~~L~-~~gI~v  315 (346)
T TIGR01141       242 SRLAQAAAIAALRD-DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR---DADALFEALL-EKGIIV  315 (346)
T ss_pred             CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC---CHHHHHHHHH-HCCeEE
Confidence            88899998888875 3467888888999999999999887555654 4458899999874   5678888775 789999


Q ss_pred             ecCCCCCC-CCeEEEEecCCCHHHHHHHHHHH
Q 015890          347 IPGGACGC-RGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       347 ~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      .+|..|+. ++++|++++  ++++++++++.|
T Consensus       316 ~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l  345 (346)
T TIGR01141       316 RDLNSYPGLPNCLRITVG--TREENDRFLAAL  345 (346)
T ss_pred             EeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence            99987743 789999988  578888888776

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=6.6e-41  Score=312.11  Aligned_cols=324  Identities=21%  Similarity=0.346  Sum_probs=262.4

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE-ecChHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV-TAGANQAFVNIV  106 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~-~~g~t~a~~~~~  106 (398)
                      +++++++|+.|.++++++|.+++++.+.+..  ...|++. ...++|+.+++++    ++++++|++ ++|+++++..++
T Consensus        32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~~~  104 (361)
T PRK00950         32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDTLM  104 (361)
T ss_pred             CccceEEccCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHHHH
Confidence            4568999999999999999999999887654  4567544 4488999999987    678889999 789999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .+++++||+|+++.|+|..+...++..|++++.+ +.+ +++.+|++.+++.++.+  ++++++++|+||||.+++   .
T Consensus       105 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~-~~~~~~~~~l~~~~~~~--~~~v~~~~p~nptG~~~~---~  177 (361)
T PRK00950        105 RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYA-KRE-EDFSLDVDSVLNAITEK--TKVIFLCTPNNPTGNLIP---E  177 (361)
T ss_pred             HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecC-CCCCcCHHHHHHHhccC--CCEEEEeCCCCCCCCCcC---H
Confidence            9999999999999999999988899999999988 654 34578999999998765  489999999999999999   5


Q ss_pred             HHHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          187 KRISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +++.++|+++|+++|+||+|..+.+...  .....+++++++|+||.+|++|+|+||++++   +++++.+.....  .+
T Consensus       178 ~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~--~~  252 (361)
T PRK00950        178 EDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP---EWLIDYYMRAKT--PF  252 (361)
T ss_pred             HHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC---HHHHHHHHHhcC--CC
Confidence            5666667788999999999922222111  1123467899999999999999999999998   788888877654  45


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      +.+.+.+.++..+++. .+++++..+.++++++.+.+.|+    ..+. +.+++|+|++++.  .+..+++++|. ++||
T Consensus       253 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~--~~~~~~~~~l~-~~gv  323 (361)
T PRK00950        253 SLTRLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTP--MTAKEFCEELL-KRGV  323 (361)
T ss_pred             CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCC--CCHHHHHHHHH-HCCE
Confidence            6788899888888875 56777778888888888888876    2343 4568999999942  36788888886 7899


Q ss_pred             EEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          345 VVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       345 ~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      .+++|..|..  ++++|++++.  .+++++++++|++++
T Consensus       324 ~v~~~~~f~~~~~~~lRis~~~--~~~~~~l~~~L~~il  360 (361)
T PRK00950        324 IVRDCTSFRGLGDYYIRVSIGT--FEENERFLEILKEIV  360 (361)
T ss_pred             EEeeCCccCCCCCCeEEEECCC--HHHHHHHHHHHHHHh
Confidence            9999887743  5799999994  678999999988764

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-40  Score=307.13  Aligned_cols=320  Identities=18%  Similarity=0.245  Sum_probs=256.8

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .++++++|+.|.+++++|+.+++++.+.+..  ...|++..|..++|+++++++    ++++++|++|+|+++++..++.
T Consensus        20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al~~~~~   93 (349)
T PRK07908         20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGFALLAR   93 (349)
T ss_pred             CCCCeEEecCCCCCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHh
Confidence            3578999999999999999999999988764  467977789999999999997    6789999999999999999888


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                        +++ +.++++.|+|..+...++..|++++.+ +.+++ +.+|++.+    +++  ++++++++|+||||.+++.+   
T Consensus        94 --l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v-~~~~~-~~~d~~~l----~~~--~~~i~l~np~NPTG~~~~~~---  159 (349)
T PRK07908         94 --LRP-RRAAVVHPSFTEPEAALRAAGIPVHRV-VLDPP-FRLDPAAV----PDD--ADLVVIGNPTNPTSVLHPAE---  159 (349)
T ss_pred             --cCC-CeEEEeCCCChHHHHHHHHcCCEEEee-ccCcc-cCcChhHh----ccC--CCEEEEcCCCCCCCCCcCHH---
Confidence              456 567889999999999999999999999 88754 66787754    333  58999999999999999955   


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      +|.++|+ ++.++|+||+|  +.. +.....  ...+++++++|+||.||++|+|+||++++   +++++.+.....  .
T Consensus       160 ~l~~l~~-~~~~iIvDe~y~~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~---~~~~~~~~~~~~--~  232 (349)
T PRK07908        160 QLLALRR-PGRILVVDEAFADAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA---PDVLARLTRGRA--H  232 (349)
T ss_pred             HHHHHHh-cCCEEEEECcchhhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecC---HHHHHHHHhcCC--C
Confidence            4555665 47899999999  432 322111  23467899999999999999999999998   788888876654  3


Q ss_pred             CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          264 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      ++.+.+.+.++..++.. ...++++.++.+.++++.+.+.|++++ +.+..+.+++|+|++++.    ..++... ++++
T Consensus       233 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~----~~~~~~~-l~~~  306 (349)
T PRK07908        233 WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD----AELLRKR-LRER  306 (349)
T ss_pred             CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc----HHHHHHH-HHhC
Confidence            55667777777777763 236778888889999999999998874 477777789999999873    3455554 4689


Q ss_pred             CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ||.+++|..|.  .+++|||+++.  .+++++++++|++.+.
T Consensus       307 gI~v~~g~~f~~~~~~~vRis~~~--~~~~~~l~~al~~~~~  346 (349)
T PRK07908        307 GIAVRRGDTFPGLDPDYLRLAVRP--RAEVPVLVQALAEILK  346 (349)
T ss_pred             CEEEEECCCCCCCCCCeEEEEeCC--CccHHHHHHHHHHHHh
Confidence            99999999884  36899999974  6777888888776543

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.8e-41  Score=310.15  Aligned_cols=321  Identities=23%  Similarity=0.283  Sum_probs=256.2

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      ..++++.+.+++++++....         ....|+ +....++|+++++++    ++++++|++++|+++++..++.+++
T Consensus        32 ~~~~~~~ne~~~~~~~~~~~---------~~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~~~   97 (364)
T PRK04781         32 GDVWLNANESAWANPADPDA---------STRRYP-DPQPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLVRALC   97 (364)
T ss_pred             CCEEeeCCCCCCCCChhhcc---------hhccCC-CCCHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHHHHhc
Confidence            46889999998887763111         145674 445689999999987    6888999999999999999999999


Q ss_pred             cCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          111 DAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       111 ~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .+| |.|+++.|+|..+...++..|.+++.+ +.+  .+++.+|++.+.+.+ +++  +++|++++|+||||.+++.+++
T Consensus        98 ~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~lv~l~~p~NPTG~~~~~~~~  174 (364)
T PRK04781         98 VPGRDAVLVTPPVFGMYAVCARLQNAPLVEV-PLVDGADGFHADVPAIVAAALASN--AKLVFLCSPSNPAGSAIALDQI  174 (364)
T ss_pred             CCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCCccCCCcCHHHHHHHHhccC--CeEEEEcCCCCCCCCCcCHHHH
Confidence            888 799999999988888889999999999 764  346778998886655 343  5999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      ++++++|+ +++++|+||+|  |.+.... ......+++++++||||.||++|+|+||++++   +++++.+.+...  .
T Consensus       175 ~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~---~~l~~~l~~~~~--~  248 (364)
T PRK04781        175 ERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN---AELIAVLRRCQA--P  248 (364)
T ss_pred             HHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC---HHHHHHHHhccC--C
Confidence            99999886 47999999999  5432211 11223578999999999999999999999999   899999887765  5


Q ss_pred             CCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          264 ICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      ++.+.+.+.++..+|+.+. ++..+..+.+.++++.+.+.|+++++.....+.+++|+|++++    +..++.+.+ .++
T Consensus       249 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----~~~~~~~~l-~~~  323 (364)
T PRK04781        249 YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----DAEAAFQAL-LAA  323 (364)
T ss_pred             CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHH-HHC
Confidence            6778888888888887643 4566666778888999999998886543334666999999986    356677766 589


Q ss_pred             CeEEecCCCC-CCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       343 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ||.++++..| +.++++||+++.  .++.++++++|++..
T Consensus       324 gI~v~~~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~  361 (364)
T PRK04781        324 GVVVRDQRAAPRLSDALRITLGT--PEQNDRVLAALQRTQ  361 (364)
T ss_pred             CeEEeeCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence            9999999765 346899999996  677778877776543

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-40  Score=305.20  Aligned_cols=315  Identities=22%  Similarity=0.355  Sum_probs=251.8

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ++.+.++|+.|++++++|+.+++++.+.+.......| +..+..++|+++++++++.+ +++++|++|+|+++++..++.
T Consensus        17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~~-~~~~~i~it~Ga~~~i~~~~~   94 (335)
T PRK14808         17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTDF-LSKNNVSVGNGADEIIYVMML   94 (335)
T ss_pred             CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCCC-CCcceEEEcCCHHHHHHHHHH
Confidence            5679999999999999999999999887765434446 44589999999999997653 789999999999999999998


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      ++    |+|+++.|+|+.+...++..|++++.+ +.+++ +.++.+.    +. .  .+++++++||||||.+++.++++
T Consensus        95 ~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~----~~-~--~~~i~i~nP~NPTG~~~s~~~l~  161 (335)
T PRK14808         95 MF----DRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVN----VG-E--GDVVFIPNPNNPTGHVFEREEIE  161 (335)
T ss_pred             Hh----CcEEECCCCHHHHHHHHHHcCCeEEEe-cCCCc-CCCChhH----cc-C--CCEEEEeCCCCCCCCCcCHHHHH
Confidence            88    679999999999999999999999999 87654 3344222    22 2  48999999999999999988777


Q ss_pred             HHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890          188 RISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  265 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~  265 (398)
                      +|+    ++++++|+||+|..+.+...  .....+++++++|+||.+|++|+|+||++++   +++++.+.....  .++
T Consensus       162 ~l~----~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~---~~~~~~l~~~~~--~~~  232 (335)
T PRK14808        162 RIL----KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS---EKFIDAYNRVRL--PFN  232 (335)
T ss_pred             HHH----hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC---HHHHHHHHHhcC--CCC
Confidence            775    47999999999922222211  1223568999999999999999999999999   789898877663  467


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  345 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~  345 (398)
                      .+.+.|.++..+++. .++..+..+.+.++++++.+.|++.+. .+..+. ++|+|+.++..  +..++.+.+ .++||.
T Consensus       233 ~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-g~f~~~~l~~~--~~~~~~~~l-~~~Gi~  306 (335)
T PRK14808        233 VSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITDSR-GNFVFIFMEKE--EKERLLEHL-RAKNIA  306 (335)
T ss_pred             CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCC-CeEEEEeCCCc--cHHHHHHHH-HHCCeE
Confidence            788899998888875 456677777888888899999988764 666665 88899998742  456666665 589999


Q ss_pred             EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       346 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      |+..     .+++||+++.  .++.+++++.|++
T Consensus       307 V~~~-----~~~~Risi~~--~~~~~~~~~~l~~  333 (335)
T PRK14808        307 VRSF-----REGVRITIGK--REENDMILKELEV  333 (335)
T ss_pred             EEEC-----CCCeEEecCC--HHHHHHHHHHHHh
Confidence            9952     4789999996  6777788777764

>PLN02397 aspartate transaminase

Probab=100.00  E-value=4.6e-40  Score=310.47  Aligned_cols=355  Identities=19%  Similarity=0.215  Sum_probs=261.4

Q ss_pred             HhhccCchHHHHHHHHHH--cCCCeEEcCCcc-CCCCCcHHHHHHHHHh----hcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890           10 RALETEMPIMVQIQELVR--GAKNAVSLAQGV-VYWQPPKMAMEKVKEL----VWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~-~~~~~~~~v~~a~~~~----~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      ++.......+....+...  .+...++|+.|. +....+|.+.+++.+.    +.......|++..|.+++|+++++++.
T Consensus        26 ~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~  105 (423)
T PLN02397         26 HVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAY  105 (423)
T ss_pred             cCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHc
Confidence            344455555666666654  345678888886 4444444444444443    333335579999999999999999986


Q ss_pred             hhcCC--CCCcE-----EEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHH
Q 015890           83 QENKL--YKSSV-----MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADW  154 (398)
Q Consensus        83 ~~~~~--~~~~v-----~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~  154 (398)
                      +....  ++++|     +.++|+ .++...+..++.+||+|++++|+|+.+...++..|++++.+ +. +++++.+|++.
T Consensus       106 ~~~~~~~~~~~i~~~~i~~g~Ga-~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~l~~~~~~~~d~~~  183 (423)
T PLN02397        106 GADSPAIKENRVATVQCLSGTGS-LRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTY-RYYDPKTRGLDFDG  183 (423)
T ss_pred             CCCCchhhcCeeEeeecccchHH-HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEe-ecccCcCCccCHHH
Confidence            55432  12333     223333 33444444555699999999999999999999999999999 76 44457789999


Q ss_pred             HHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC--c-cc--cc--cCCcEEE
Q 015890          155 LEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR--K-HC--CV--EGDHVVN  224 (398)
Q Consensus       155 l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~--~-~~--~~--~~~~~i~  224 (398)
                      +++.+... ++.+++++++||||||.+++.+++++|+++|+++|+++|+||+|  +.+++.  + ..  ..  ..+++++
T Consensus       184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~  263 (423)
T PLN02397        184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV  263 (423)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence            88887632 22478888899999999999999999999999999999999999  666431  1 11  11  2357999


Q ss_pred             EcccccccCCCcceeEEEE--ccCCcHHHHH----HHHHhhccCCCCcchHHHHHHHHHhcCCc---hH---HHHHHHHH
Q 015890          225 LFSFSKAYGMMGWRVGYIA--YPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDL  292 (398)
Q Consensus       225 ~~s~sK~~~~~G~r~G~i~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~  292 (398)
                      ++|+||.++++|+|+||++  .++  +++++    .+.........+++...|.++..+|+...   .+   +++.++.+
T Consensus       264 ~~SfSK~~~~~G~RvG~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~  341 (423)
T PLN02397        264 AQSYAKNMGLYGERVGALSVVCKS--ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRI  341 (423)
T ss_pred             EEECcccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999985  332  45444    33344433445677889988888887521   23   56778899


Q ss_pred             HHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHH
Q 015890          293 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD  369 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~  369 (398)
                      +++++.+.+.|++++.   +.+..|++++|+|++++      .+++++|++++||.+.++      +  |++++..+.+.
T Consensus       342 ~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~  407 (423)
T PLN02397        342 ISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------KEQVDRMTKEYHIYMTRD------G--RISMAGLSSKN  407 (423)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------HHHHHHHHHhCCEEECCC------C--eEEEeeCCHHH
Confidence            9999999999998752   46677999999999874      358899999999999742      2  99998668899


Q ss_pred             HHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLE  382 (398)
Q Consensus       370 ~~~~~~~l~~~~~  382 (398)
                      +++++++|+++++
T Consensus       408 i~~~~~~i~~~~~  420 (423)
T PLN02397        408 VPYLADAIHAVVT  420 (423)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999974

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.1e-40  Score=303.51  Aligned_cols=316  Identities=21%  Similarity=0.363  Sum_probs=250.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +.+.++|+.|.+++++|+.+++++.+.+.......|+ ..|..++|+++++++    ++++++|++|+|+++++..++..
T Consensus        17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~   91 (337)
T PRK03967         17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYLVKL   91 (337)
T ss_pred             CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHHHHH
Confidence            4578999999999999999999999887543456784 578899999999998    58899999999999999998887


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      +  +||+|+++.|+|..+...++..|.+++.+ +.+++ +.+|++.+++.+. +  ++++++++|+||||.+++.+++.+
T Consensus        92 ~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~-~--~~~v~~~~P~NPtG~~~~~~~l~~  164 (337)
T PRK03967         92 F--EGKHIVITPPTFGMYSFYAKLNGIPVIDV-PLKED-FTIDGERIAEKAK-N--ASAVFICSPNNPTGNLQPEEEILK  164 (337)
T ss_pred             h--CCCeEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCcCHHHHHHhcc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            6  69999999999998888889999999999 77643 5789999988653 3  488889999999999999655554


Q ss_pred             HHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890          189 ISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  266 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~  266 (398)
                         +++ +++++|+||+|..+.+...  .....+++++++|+||.||++|+|+||++++   +++++.+.....  .++.
T Consensus       165 ---i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~---~~~i~~~~~~~~--~~~~  235 (337)
T PRK03967        165 ---VLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN---EEIIDALYRIKP--PFSL  235 (337)
T ss_pred             ---HHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC---HHHHHHHHhhcC--CCCC
Confidence               454 6999999999922222111  1223468999999999999999999999998   788888887765  4577


Q ss_pred             chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      +.+.|.++..+++. .++..+..+.+.++++.+.+.|.+..     .+.+++|+|++++        +.+.|+ ++||.+
T Consensus       236 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~~~~~~~~~~--------~~~~l~-~~gi~v  300 (337)
T PRK03967        236 NILTMKIVRLALDH-YDLIEERIDYIIKERERVRRELGEYA-----YPSDANFLLLKLD--------AYDYLL-ENGIVV  300 (337)
T ss_pred             CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhccCc-----CCCCCcEEEEhHH--------HHHHHH-HCCEEE
Confidence            89999999999975 45666666777777888888887642     2566999998763        456665 789999


Q ss_pred             ecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       347 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++.. ..++++|++++.  .++.++++++|.++...
T Consensus       301 ~~~~~-~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        301 RKLSG-RLEGHIRVTVGK--REENDEFIKALKEIKEG  334 (337)
T ss_pred             EeCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence            87653 346799999996  56666777777665443

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.9e-40  Score=303.23  Aligned_cols=308  Identities=18%  Similarity=0.275  Sum_probs=241.9

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      .+++|+.+.+++...             .....| |.....++|+++++++    ++++++|++|+|+++++..++. ++
T Consensus        17 ~~i~l~~Nenp~~~~-------------~~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~~-~~   77 (332)
T PRK06425         17 RIIDFSANINDFMDI-------------GDISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLLS-YI   77 (332)
T ss_pred             CEEEeccccCCCcCh-------------hhcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH-Hh
Confidence            689999999988411             113457 6666789999999987    7889999999999999999997 46


Q ss_pred             cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      ++| .|+++.|+|+.+...++..|++++.+ |.++.  .+|.+.+++   .+  +++|++++||||||.+++.+++++|+
T Consensus        78 ~~~-~vv~~~P~y~~y~~~~~~~G~~v~~v-p~~~~--~~~~~~l~~---~~--~k~v~l~nP~NPTG~~~s~~~~~~l~  148 (332)
T PRK06425         78 NVG-NIIIVEPNFNEYKGYAFTHGIRISAL-PFNLI--NNNPEILNN---YN--FDLIFIVSPDNPLGNLISRDSLLTIS  148 (332)
T ss_pred             CCC-cEEEeCCChHHHHHHHHHcCCeEEEE-eCCcc--cCcHHHHhh---cC--CCEEEEeCCCCCcCCccCHHHHHHHH
Confidence            676 57788999999999999999999999 87653  345555542   23  59999999999999999999999999


Q ss_pred             HHHHHcCCEEEEeece--eccCCCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890          191 DLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  265 (398)
Q Consensus       191 ~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~  265 (398)
                      ++|+++|+++|+||+|  |.+++....   ....+++++++||||.+|+||+|+||++++   +++++.+.....  +++
T Consensus       149 ~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~---~~li~~l~~~~~--~~~  223 (332)
T PRK06425        149 EICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD---DYNMKISRKITE--PWS  223 (332)
T ss_pred             HHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC---HHHHHHHHHcCC--CCc
Confidence            9999999999999999  555432111   112468999999999999999999999999   789888887654  344


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  345 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~  345 (398)
                      .+.+++.++. ... .+.++++.++.++++++.+.+.|++++. .+..+.+++|+|+.++    +..++.+.++ ++||.
T Consensus       224 ~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~g~f~~~~~~----~~~~~~~~l~-~~gi~  295 (332)
T PRK06425        224 VCDPAIDFIR-SID-LDYVAKHSLDIMENERSYLINNLEAMGF-RAAGDPSANFITFMIP----DAHDFYSYLL-KNGIL  295 (332)
T ss_pred             cCHHHHHHHH-Hhh-hHHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCCCceEEEEEcC----CHHHHHHHHH-HCCeE
Confidence            4444433322 111 1345667788899999999999998864 5554445899999986    4678888886 68999


Q ss_pred             EecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          346 VIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       346 v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ++|+..|+.  ++++||+++.  .++.++++++|++++
T Consensus       296 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~  331 (332)
T PRK06425        296 VRLLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL  331 (332)
T ss_pred             EEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence            999998853  5799999995  678888888887654

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-40  Score=309.02  Aligned_cols=317  Identities=22%  Similarity=0.315  Sum_probs=252.4

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +.+.++|+.|.+++++++.+  .+    .  ....|+. .+..++|+++++++    ++++++|++|+|+++++..++.+
T Consensus        30 ~~~~~~l~~ne~~~~~~~~~--~~----~--~~~~Yp~-~~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~~~~   96 (354)
T PRK04635         30 GRGDIWINANESPFNNEYKL--DL----A--RLNRYPE-CQPPELINAYSAYA----GVAPEQILTSRGADEAIELLIRA   96 (354)
T ss_pred             CCCcEEeeCCCCCCCCChhh--hh----H--HhccCCC-CCHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHHHH
Confidence            35679999999999877653  11    1  1456854 45799999999986    78999999999999999999999


Q ss_pred             hccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          109 LCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       109 l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      ++++| |+|+++.|+|..|...++..|++++.+ +.++ ++.+|.+.++. + ++  +++|++++|+||||.+++.++++
T Consensus        97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v-~~~~-~~~~~~~~l~~-~-~~--~~li~i~nP~NPTG~~~~~~~l~  170 (354)
T PRK04635         97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKAL-PLTA-DYQLPLDYIEQ-L-DG--AKLVFICNPNNPTGTVIDRADIE  170 (354)
T ss_pred             hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCC-CCCCCHHHHHh-c-cC--CCEEEEeCCCCCCCccCCHHHHH
Confidence            99998 899999999999999899999999999 8764 35788888873 3 33  59999999999999999988888


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +|++.|+  ++++|+||+|  +...... ......+++++++|+||++|++|+|+||++++   +++++.+.....  .+
T Consensus       171 ~l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~---~~~~~~l~~~~~--~~  243 (354)
T PRK04635        171 QLIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN---EELIEILMRVIA--PY  243 (354)
T ss_pred             HHHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC---HHHHHHHHhhcC--CC
Confidence            8888776  4999999999  4321110 11123468899999999999999999999998   788888876543  56


Q ss_pred             CcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          265 CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      +.+.+.+.++..++... .+++++..+.+.++++.+.+.|++++.+.+.++. ++|+|++++    +..++.+.+ .++|
T Consensus       244 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~----~~~~~~~~l-~~~g  317 (354)
T PRK04635        244 PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFD----DVDAVFKAL-WDAG  317 (354)
T ss_pred             CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECC----CHHHHHHHH-HHCC
Confidence            67788888888888652 3556777788888899999999988755666665 789999886    355666655 6899


Q ss_pred             eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      |.++.+.....++++|||++.  .+++++++++|++
T Consensus       318 v~v~~~~~~~~~~~lRis~~~--~e~~~~l~~al~~  351 (354)
T PRK04635        318 IVARAYKDPRLANCIRFSFSN--RAETDKLIGLIRN  351 (354)
T ss_pred             EEEEECCCCCCCCeEEEEeCC--HHHHHHHHHHHHH
Confidence            999876544457899999984  7888888887754

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-39  Score=303.96  Aligned_cols=331  Identities=23%  Similarity=0.269  Sum_probs=251.1

Q ss_pred             HHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CC---CCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           47 MAMEKVKELVW---DPSISKYGADEGLPELRDALVKKLNQENK-LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        47 ~v~~a~~~~~~---~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~---~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      .+++++.+.+.   .....+|++..|.+++|+.+++++.+..+ ..   .++|++|+|+++++..++.+++++||+|+++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~   99 (388)
T PRK08637         20 MYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLP   99 (388)
T ss_pred             chHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEc
Confidence            44444444333   23477899999999999999999876542 33   2578999999999999999999999999999


Q ss_pred             CCCCcChhhHHH-hcCcEEEEeccCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-
Q 015890          120 APYYFNSYMSFQ-MTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-  195 (398)
Q Consensus       120 ~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~-  195 (398)
                      +|+|+.+...+. ..|.+++.+ +.+.+++.+|++.+++.++  .....+++++++||||||.+++.+++++|+++|++ 
T Consensus       100 ~P~y~~~~~~~~~~~g~~vv~v-~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~  178 (388)
T PRK08637        100 DHNWGNYKLTFNTRRGAEIVTY-PIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKEL  178 (388)
T ss_pred             CCCCccHHHHHHHhcCCEEEEe-cccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            999999998754 689999999 7742333579999999887  22223567788999999999999999999999875 


Q ss_pred             ----cCCEEEEeece--eccCCCccc----c--ccCCcE--EEEcccccccCCCcceeEEEEccC---CcHHHHHHHHHh
Q 015890          196 ----AGSWLVVDNTY--FMYDGRKHC----C--VEGDHV--VNLFSFSKAYGMMGWRVGYIAYPS---EVEGFATQLLKV  258 (398)
Q Consensus       196 ----~~~~livDe~~--~~~~~~~~~----~--~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~---~~~~~~~~l~~~  258 (398)
                          +++++|+||+|  +.+++....    .  ...+++  +.++|+||.+++||+|+||++.+.   ..+++++.+...
T Consensus       179 ~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~  258 (388)
T PRK08637        179 ADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKK  258 (388)
T ss_pred             HhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHH
Confidence                89999999999  666553221    1  123464  445699999999999999998652   115666666532


Q ss_pred             h----ccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCC
Q 015890          259 Q----DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHL  329 (398)
Q Consensus       259 ~----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~  329 (398)
                      .    ....++.|.+.|.++..+++...  .+..+....++++++.+.+.|++.+   .+.+..+.+++|+|++++.  .
T Consensus       259 ~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--~  336 (388)
T PRK08637        259 VKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--V  336 (388)
T ss_pred             HHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--H
Confidence            1    12235778999999999997521  2234445567777777888886652   3566778889999999973  2


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +..++++++++++||.+.+.    .++++||+++..+.+++++++++|.++++++
T Consensus       337 ~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        337 DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            56788888877789988753    4678999999878999999999999998764

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=1.8e-39  Score=301.14  Aligned_cols=322  Identities=27%  Similarity=0.385  Sum_probs=260.2

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      ++++|+.|.+++++++.+.+++.+.+..  ...| +..|..++|+.+++++    ++++++|++++|+++++..++..++
T Consensus        23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~~~~~   95 (352)
T PRK03321         23 GAIKLSSNETPFGPLPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLVQATA   95 (352)
T ss_pred             cceeccCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHHHHhc
Confidence            6899999999998899999999887653  4567 5678999999999998    5778899999999999999999999


Q ss_pred             cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      ++||+|+++.|+|..+...++..|.+++.+ +.+++ +.+|++.+++.+++++  ++|++++|+||||.+++.+++.+++
T Consensus        96 ~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~l~~l~  171 (352)
T PRK03321         96 GPGDEVIFAWRSFEAYPILVQVAGATPVQV-PLTPD-HTHDLDAMAAAITDRT--RLIFVCNPNNPTGTVVTPAELARFL  171 (352)
T ss_pred             CCCCEEEeCCCCHHHHHHHHHHcCCEEEEc-cCCCC-CCCCHHHHHHhhccCC--CEEEEeCCCCCcCCCcCHHHHHHHH
Confidence            999999999999988888889999999998 77643 4679999999997654  8999999999999999977777776


Q ss_pred             HHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          191 DLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       191 ~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +.| ++++++|+||+|  +.+.+....    ....+++++++|+||.||++|+|+||++++   +++++.+.+..  ..+
T Consensus       172 ~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~--~~~  245 (352)
T PRK03321        172 DAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH---PEVIAALRKVA--VPF  245 (352)
T ss_pred             HhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC---HHHHHHHHHhc--CCC
Confidence            654 369999999999  555442211    112468999999999999999999999998   88998887654  367


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      +.+.+.|.++..++.. .+...+..+...++++.+.+.|++.+. .+..+ +++|+|++++.   +..++.+.| +++||
T Consensus       246 ~~s~~~q~~a~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~-~g~~i~i~l~~---~~~~~~~~l-~~~gI  318 (352)
T PRK03321        246 SVNSLAQAAAIASLAA-EDELLERVDAVVAERDRVRAALRAAGW-TVPPS-QANFVWLPLGE---RTADFAAAA-AEAGV  318 (352)
T ss_pred             CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCC-CCCEEEEeCCC---CHHHHHHHH-HHCCE
Confidence            8899999988888875 333445555566667788888887754 44444 58999999853   467788877 58999


Q ss_pred             EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      .+.+   |+ ..+|||+++.  .++.++++++|.+++.
T Consensus       319 ~v~~---~~-~~~iRi~~~~--~~~~~~~~~al~~~~~  350 (352)
T PRK03321        319 VVRP---FA-GEGVRVTIGA--PEENDAFLRAARAWRA  350 (352)
T ss_pred             EEEc---cC-CCcEEEeeCC--HHHHHHHHHHHHHHhc
Confidence            9987   32 4569999985  7888899988887643

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=4.8e-39  Score=295.19  Aligned_cols=310  Identities=19%  Similarity=0.230  Sum_probs=244.1

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~  108 (398)
                      .++++|+.+.+++++|+....+  ..     ...|+ +.. .++++.+++++    +++ +++|++|+|+++++..+.. 
T Consensus        24 ~~~i~ls~Nenp~~~~~~~~~~--~~-----~~~Yp-~~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~l~~-   89 (339)
T PRK06959         24 DAWLDLSTGINPHGYPVPPVPA--DA-----WRRLP-EDD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRALPA-   89 (339)
T ss_pred             hhhceeccCCCCCCCCCCCCCH--HH-----HHhCC-Cch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHHHHH-
Confidence            4589999999999876332221  11     23474 444 78888888877    665 5899999999999997755 


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ++++|+ |+++.|+|+.+...++..|.+++.+ +.+.       +.+    ...  .+++++++||||||.+++.+++++
T Consensus        90 ~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v-~~~~-------~~~----~~~--~~~v~l~nPnNPTG~~~s~~~l~~  154 (339)
T PRK06959         90 LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPL-DEAA-------DTL----PAA--LTHLIVVNPNNPTAERLPAARLLR  154 (339)
T ss_pred             hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEee-cccc-------hhc----ccc--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            567776 8999999999999999999999988 6543       122    122  378999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA  266 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~  266 (398)
                      +++.|.+++.++|+||+|  +.+..........+++++++||||.||++|+|+||++++   +++++.+.+...  +++.
T Consensus       155 l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~---~~li~~l~~~~~--~~~v  229 (339)
T PRK06959        155 WHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA---PALLAALRDALG--AWTV  229 (339)
T ss_pred             HHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecC---HHHHHHHHHhcC--CCCC
Confidence            999999899999999999  433211111113467999999999999999999999999   899999988765  5667


Q ss_pred             chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      +.++|.++.++|+. .++.++.++.+.++++++.+.|++++. .+. + +++|+|++++    +..++.+.|. ++||.|
T Consensus       230 s~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~-~~~f~~~~~~----~~~~l~~~l~-~~GI~v  300 (339)
T PRK06959        230 SGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLRAHGF-AVH-A-TPLFSWTDDP----RAAALHAALA-RRGIWT  300 (339)
T ss_pred             cHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-C-cceEEEEeCC----CHHHHHHHHH-hCCeEE
Confidence            89999999999985 567788889999999999999998864 444 3 4789999875    3567777775 889999


Q ss_pred             ecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       347 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.   |+..+++||+++. +.++.++++++|+++++.+..
T Consensus       301 r~---~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~  336 (339)
T PRK06959        301 RY---FAPPPSVRFGLPA-DEAEWQRLEDALAECVPTLAA  336 (339)
T ss_pred             EE---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhh
Confidence            85   3456799999964 567899999999888777653

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=2.4e-38  Score=287.93  Aligned_cols=299  Identities=21%  Similarity=0.320  Sum_probs=226.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.++++ |+.+.+++.+++..  ...|+.   ...+++++++++    +   ++|++|+|+++++..++..+
T Consensus         8 ~~~i~l~~~~np~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~~~~~   74 (311)
T PRK08354          8 EGLIDFSASVNPYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF----G---EPIVITAGITEALYLIGILA   74 (311)
T ss_pred             cceeEecCCCCCCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH----C---CCEEECCCHHHHHHHHHHhh
Confidence            46999999998886 68889999877654  346742   367888888876    3   57999999999999888544


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                       .+||+|+++.|+|+.+...++..|.+++.+ +       +|++.+++.++ +  ++++++++|+||||.+++.+++++|
T Consensus        75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~-------~d~~~l~~~~~-~--~~~vi~~~P~NPTG~~~~~~~l~~l  142 (311)
T PRK08354         75 -LRDRKVIIPRHTYGEYERVARFFAARIIKG-P-------NDPEKLEELVE-R--NSVVFFCNPNNPDGKFYNFKELKPL  142 (311)
T ss_pred             -CCCCeEEEeCCCcHHHHHHHHHcCCEEeec-C-------CCHHHHHHhhc-C--CCEEEEecCCCCCCCccCHHHHHHH
Confidence             489999999999999999999999998765 2       47888888876 3  3789999999999999999999999


Q ss_pred             HHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890          190 SDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  267 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  267 (398)
                      +++|+++|+++|+||+|  |.+++..   ...+++++++|+||.|+++|+|+||+++.   .   +.+.....  .+..+
T Consensus       143 ~~~a~~~~~~li~De~y~~f~~~~~~---~~~~~vi~~~S~SK~~~l~GlRiG~~v~~---~---~~l~~~~~--~~~~~  211 (311)
T PRK08354        143 LDAVEDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGF---E---EAFRSVRM--PWSIG  211 (311)
T ss_pred             HHHhhhcCcEEEEeCcchhccccccc---cCCCcEEEEeccHhhcCCccceeeeeeeh---H---HHHHHcCC--CccCC
Confidence            99999999999999999  6654421   22678999999999999999999999973   3   34444443  44556


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  347 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  347 (398)
                      .+.+.++..+++...+++.+..+.+.+.++.+.+.+       ...+. ++|++++++    +..++++.+ .++||.++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~-~~~~~~~~~----~~~~~~~~l-~~~gv~v~  278 (311)
T PRK08354        212 STGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKAL-------YVKSD-ANFFIKDVG----DAEKFVEFL-KRNGILVR  278 (311)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-CcEEEEECC----CHHHHHHHH-HHCCeEEE
Confidence            666777766666322344444455555555444433       12344 666667664    456788876 48899999


Q ss_pred             cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ||..|+.++++||+++.  .++.++++++|++
T Consensus       279 ~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~  308 (311)
T PRK08354        279 DCTSFGLPGYIRFSVRD--REENEKLIRALRE  308 (311)
T ss_pred             ecccCCCCCeEEEEeCC--HHHHHHHHHHHHH
Confidence            99998777999999996  4445555555544

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=277.61  Aligned_cols=322  Identities=25%  Similarity=0.372  Sum_probs=266.5

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCc
Q 015890           61 ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGV  135 (398)
Q Consensus        61 ~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~  135 (398)
                      ...|++-.|.+++|+++++++.+..+    .+|+++++++|+|.+++.++..|.+|||.-|+|.|.|+++..-++. .|+
T Consensus       114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv  193 (471)
T KOG0256|consen  114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV  193 (471)
T ss_pred             HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence            56788889999999999999987653    3689999999999999999999999999999999999998876654 478


Q ss_pred             EEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ecc
Q 015890          136 THILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMY  209 (398)
Q Consensus       136 ~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~  209 (398)
                      ++++++-...+|++++.+.+|++++    .+.+++.|+|+||+||.|.++++|++..+.+++.++|+.+|+||+|  ..|
T Consensus       194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF  273 (471)
T KOG0256|consen  194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF  273 (471)
T ss_pred             eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence            9998833346689999999999886    3445899999999999999999999999999999999999999999  344


Q ss_pred             CCCcc---------ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC
Q 015890          210 DGRKH---------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT  280 (398)
Q Consensus       210 ~~~~~---------~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  280 (398)
                      +...+         .....+.+-++.|+||-||+||+|+|.+...+  +.++....++..  ....++..|..++.+|.+
T Consensus       274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n--e~VvsaA~kmss--f~~vSs~tQ~~la~LLSD  349 (471)
T KOG0256|consen  274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN--EDVVSAATKMSS--FGLVSSQTQYLLASLLSD  349 (471)
T ss_pred             CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC--hHHHHHHHHHhh--ccCCcHHHHHHHHHHhch
Confidence            33221         11135678889999999999999999999887  677776666654  456788999999999986


Q ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCC
Q 015890          281 ---GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGAC  352 (398)
Q Consensus       281 ---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~  352 (398)
                         .+.++++..++++.+.+++.+.|++++. .+....+|+|+|+++.+--     ....+++++++.+-++.+.||+.|
T Consensus       350 ~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~  428 (471)
T KOG0256|consen  350 EEFTREYLRENNKRLRIRHRYIVEGLKALGI-PCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSC  428 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCC-ceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcc
Confidence               2256777888888899999999999887 7888888999999996532     234567888886669999999987


Q ss_pred             C--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          353 G--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       353 ~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .  .+||+|+++....++.++-++++|++.+....+.
T Consensus       429 ~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~~  465 (471)
T KOG0256|consen  429 HCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQP  465 (471)
T ss_pred             eecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhcc
Confidence            5  6899999999866666666999999999865543

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=2.3e-38  Score=290.27  Aligned_cols=306  Identities=21%  Similarity=0.324  Sum_probs=235.8

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.+++++++..+..  ..     ...|+...  .++|++++++++      +++|++|+|+++++..+..  
T Consensus        20 ~~~i~l~~ne~p~~~~~~~~~~--~~-----~~~yp~~~--~~Lr~~ia~~~~------~~~I~it~Gs~~al~~~~~--   82 (330)
T PRK05664         20 ADWLDLSTGIAPWPWPVPAIPA--DA-----WARLPETD--DGLEAAARAYYG------APQLLPVAGSQAAIQALPR--   82 (330)
T ss_pred             HHheeecCCcCCCCCCCcccCH--HH-----HHhCCCCh--HHHHHHHHHHhC------CCCEEECcCHHHHHHHHHH--
Confidence            3579999999887655322211  11     22364332  789999999973      4799999999999998863  


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +.+||+|+++.|+|+.+...++..|++++.+ +.+         .+++.++ +  ++++++++||||||.+++.+++++|
T Consensus        83 ~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~---------~~~~~~~-~--~~~v~l~nP~NPTG~~~s~~~l~~l  149 (330)
T PRK05664         83 LRAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEA---------EVEAALD-S--LDVLVVVNPNNPTGRRFDPARLLAW  149 (330)
T ss_pred             ccCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chh---------hHhhhhc-C--CCEEEEeCCcCCCCCccCHHHHHHH
Confidence            5789999999999999999999999999988 542         3455553 3  4789999999999999999999999


Q ss_pred             HHHHHHcCCEEEEeeceeccCC-Cc-cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890          190 SDLCKAAGSWLVVDNTYFMYDG-RK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  267 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~~~~~~-~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  267 (398)
                      +++|+++|+++|+||+|..+.. .. ......+++++++||||.||+||+|+||++++   +++++.+.....  +++.+
T Consensus       150 ~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~---~~l~~~~~~~~~--~~~~~  224 (330)
T PRK05664        150 HARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE---PALLRALAELLG--PWTVS  224 (330)
T ss_pred             HHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeC---HHHHHHHHHhcC--CCCCC
Confidence            9999999999999999933322 11 11123468999999999999999999999998   889998877654  45678


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  347 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  347 (398)
                      .+.+.++..+|.. ..+.++.++.+.++++.+.+.|++.+. ...++ ..+|+|+.++    +..++.+.| .++||.|+
T Consensus       225 ~~~~~~~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~-~~~f~~~~~~----~~~~~~~~l-~~~gi~v~  296 (330)
T PRK05664        225 GPTRWLAQAALAD-TPWQRRQRERLLAASQRLAALLRRHGL-TPAGG-CALFQWVRTE----DAAALHEFL-ARRGILTR  296 (330)
T ss_pred             HHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCC-cceEEEEecC----CHHHHHHHH-HHCCeEEE
Confidence            8899999999985 456677788889999999999988754 32222 2488888874    466777766 58899998


Q ss_pred             cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +   |..++++||+++. +.++++++.+.|++..+
T Consensus       297 ~---f~~~~~iRis~~~-~~~~~~~l~~al~~~~~  327 (330)
T PRK05664        297 L---FEQPASLRFGLPA-DEADWARLDQALLAYRK  327 (330)
T ss_pred             E---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHh
Confidence            5   4456899999995 56666666666665543

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=2.5e-38  Score=290.21  Aligned_cols=308  Identities=24%  Similarity=0.370  Sum_probs=248.2

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +++.++|+.|.++.++|  ..+....     ....|++.. .+++|+.+++++    ++++++|++++|+++++..+...
T Consensus        16 ~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~y~~~~-~~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~~~~~   83 (330)
T TIGR01140        16 PEDWLDFSTGINPLGPP--VPPIPAS-----AWARYPDPE-YDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRL   83 (330)
T ss_pred             hhheeEccccCCCCCCC--hhhcchH-----HHhhCCCcc-HHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHH
Confidence            56789999999888765  2222111     245676555 499999999987    67789999999999999997666


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                       +.+| +|+++.|+|..+...++..|.+++.+ +        |++.+++.++ .  ++++++++|+||||.+++.+++++
T Consensus        84 -l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~-~--------d~~~l~~~~~-~--~~~v~i~~p~NPtG~~~~~~~~~~  149 (330)
T TIGR01140        84 -LAPG-RVLVLAPTYSEYARAWRAAGHEVVEL-P--------DLDRLPAALE-E--LDVLVLCNPNNPTGRLIPPETLLA  149 (330)
T ss_pred             -hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEe-C--------CHHHHHhhcc-c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence             4677 79999999999999999999999888 4        7888988884 3  478999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      |+++|+++|+++|+||+|  +.+.. ....  ...+++++++|+||.+|++|+|+||++++   +++++.+.....  .+
T Consensus       150 l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~---~~~~~~l~~~~~--~~  223 (330)
T TIGR01140       150 LAARLRARGGWLVVDEAFIDFTPDA-SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH---PALLARLREALG--PW  223 (330)
T ss_pred             HHHHhHhcCCEEEEECcccccCCcc-chhhHhccCCCEEEEEecchhhcCchhhhhheeCC---HHHHHHHHhcCC--CC
Confidence            999999999999999999  44321 1111  13478899999999999999999999999   788888877664  45


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      +.+.++|.++..+++. .++.++..+.++++++.+.+.|++.+.+++.+ .+++|+|++++.    ..+++++|+ ++||
T Consensus       224 ~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~----~~~l~~~l~-~~gi  296 (330)
T TIGR01140       224 TVNGPARAAGRAALAD-TAWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD----AAALHEALA-RRGI  296 (330)
T ss_pred             CchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC----HHHHHHHHH-HCCE
Confidence            6788899999999985 46667788889999999999999987655544 458999999863    568888886 6899


Q ss_pred             EEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHH
Q 015890          345 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       345 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      .+.||..|.  ..++|||+++. ..++ ++++++|
T Consensus       297 ~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l  329 (330)
T TIGR01140       297 LIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL  329 (330)
T ss_pred             EEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence            999999885  35799999996 3343 5555554

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=1.5e-35  Score=275.33  Aligned_cols=337  Identities=31%  Similarity=0.490  Sum_probs=274.9

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhc
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      +||+.|+++...+|..+.++.+.-.......|++..+..++++.+++++...++.  ..+++++++|+++++..++.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~   80 (350)
T cd00609           1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL   80 (350)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence            4789999999888888887765222333567888899999999999999887653  36789999999999999999999


Q ss_pred             cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh--HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       111 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~--e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ++||+|+++.++|+++...++..|.+++.+ +.++.+. .+.  +.++....++  +++|++++++||||.++|.+++++
T Consensus        81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~~~~~~~~~~~~~~~--~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGG-FLLDLELLEAAKTPK--TKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             CCCCEEEEcCCCchhHHHHHHHCCCEEEEE-ecccccC-CccCHHHHHhhcCcc--ceEEEEECCCCCCCcccCHHHHHH
Confidence            999999999999999999999999999998 7765542 232  5566655544  599999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      |+++|+++|+++|+|++|  +.+.+...    .....+.+++++|++|.++.+|.++|++++++  +++.+.+.......
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~--~~~~~~~~~~~~~~  234 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP--EELLERLKKLLPYT  234 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH--HHHHHHHHHHHHhc
Confidence            999999999999999999  44444332    23345578999999999988999999999983  27888887777665


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +++.+...+.++..+++....+.++..+.+.++++++.+.|++.+...+..+..++++|+.++..  ...+.+.+++.++
T Consensus       235 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~  312 (350)
T cd00609         235 TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG--DDEEFLERLLLEA  312 (350)
T ss_pred             ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC--ChHHHHHHHHHhC
Confidence            67888999999999998743677888889999999999999988775434556689999998753  2445566677788


Q ss_pred             CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      ||.+.++..|.  .+.++|++++.. .+|+++++++|+
T Consensus       313 gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~  349 (350)
T cd00609         313 GVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA  349 (350)
T ss_pred             CEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence            99999988775  678999999986 889999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=3.2e-35  Score=258.34  Aligned_cols=319  Identities=21%  Similarity=0.310  Sum_probs=261.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHh-hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEE
Q 015890           61 ISKYGADEGLPELRDALVKKLN-QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH  137 (398)
Q Consensus        61 ~~~y~~~~~~~~~~~~l~~~l~-~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~  137 (398)
                      ..+|+++.|.+++...+.++.. ..+.  ....+|++|+|.|.+++.+++.+++.||.|++...+|.+.....+..|+++
T Consensus        93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~  172 (472)
T KOG0634|consen   93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI  172 (472)
T ss_pred             hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence            5689999999999999998655 2221  235689999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCCCCChHHHHHhhcc-------CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--e
Q 015890          138 ILVGPCSSKTLHPDADWLEKTLET-------KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F  207 (398)
Q Consensus       138 ~~~~~~~~~~~~~d~e~l~~~l~~-------~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~  207 (398)
                      +++ ++|++|  +++|.|++.++.       ++.+++++.. +.+||||..++.+..++|.++|++|++++|.||.|  +
T Consensus       173 ipv-~md~~G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L  249 (472)
T KOG0634|consen  173 IPV-KMDQDG--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL  249 (472)
T ss_pred             Eec-cccCCC--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence            999 888876  589999998862       2335666654 77999999999999999999999999999999999  3


Q ss_pred             ccC---CCc--------------------cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          208 MYD---GRK--------------------HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       208 ~~~---~~~--------------------~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      -+.   +..                    ...+..++||-..||||.++ ||+|+||+.++   +.+++++.......+.
T Consensus       250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~---~~~l~ril~~ae~~t~  325 (472)
T KOG0634|consen  250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN---SLFLKRILDLAEVATS  325 (472)
T ss_pred             eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC---HHHHHHHhhhcceeec
Confidence            332   110                    01123578999999999997 99999999999   7888888887777777


Q ss_pred             CcchHHHHHHHHHhcC-Cc----hHHHHHHHHHHHHHHHHHHHhcc-CCC--CccccCCccEEEEeeCC-------CCCC
Q 015890          265 CASIISQHLALYSLQT-GP----EWVTERVKDLVRNREIIREALSP-LGE--GAVKGGEGAIYLWARLP-------EKHL  329 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~--~~~~~~~~~~~~~~~~~-------~~~~  329 (398)
                      +++...|..+.++|+. +.    +|+.+.+..+..+++.+...|.+ ++.  .+++.|.+|+|+|++++       +...
T Consensus       326 ~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~  405 (472)
T KOG0634|consen  326 GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSIN  405 (472)
T ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchH
Confidence            7888999988888876 22    57777888888888888888876 343  36678999999999997       4333


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCC------CC-eEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGC------RG-HLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~------~~-~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +..++....+.++||.+.+|+.|..      .. ++|++++..+.++++++++++..++++...
T Consensus       406 q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~  469 (472)
T KOG0634|consen  406 QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI  469 (472)
T ss_pred             HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence            3567777777899999999998842      22 899999997888999999999999998654

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=2.1e-33  Score=265.35  Aligned_cols=349  Identities=14%  Similarity=0.095  Sum_probs=259.3

Q ss_pred             hHHHHHHHHHHcCCCeEEcCCccC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890           17 PIMVQIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS   91 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~g~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~   91 (398)
                      ....+..+..+.|.+.++|..|.+  ++.+|+   .+.+++.+++..+ ...|+++.+..++|++++++++      .++
T Consensus        23 ~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~------~~~   95 (460)
T PRK13238         23 TREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFG------YPY   95 (460)
T ss_pred             CHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhC------CCc
Confidence            444556666778999999999998  676655   5777777777554 4579999999999999999984      357


Q ss_pred             EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-------CCCC--CChHHHHHhhccC
Q 015890           92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-------KTLH--PDADWLEKTLETK  162 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~--~d~e~l~~~l~~~  162 (398)
                      +++|+|+++|+..++.+++++|| |+++.|.|..+...++..|.+++.+ +.++       +++.  +|++.|++.+++.
T Consensus        96 vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v-~~~~~~~~~~~~~f~g~id~e~Le~~i~~~  173 (460)
T PRK13238         96 TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDL-VIDEALDTGSRHPFKGNFDLEKLEALIEEV  173 (460)
T ss_pred             EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEE-eccccccccccccccCCcCHHHHHHHHhhc
Confidence            99999999999999999999999 9999999999998899999999988 7753       2444  9999999999842


Q ss_pred             --CCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece-e---ccCC-----Ccccccc-------CCcEE
Q 015890          163 --PTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY-F---MYDG-----RKHCCVE-------GDHVV  223 (398)
Q Consensus       163 --~~~~~v~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~-----~~~~~~~-------~~~~i  223 (398)
                        .++++|++++|+|||| .+++.+++++|.++|++||+++|+|+++ .   .|..     .......       .-..+
T Consensus       174 ~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~  253 (460)
T PRK13238        174 GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADG  253 (460)
T ss_pred             CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcE
Confidence              1369999999999998 8999999999999999999999999977 2   1211     1110000       00123


Q ss_pred             EEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----ccCCCCc-chHHHHHHHHHhcC--CchHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----DNIPICA-SIISQHLALYSLQT--GPEWVTERVKDLVRNR  296 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----~~~~~~~-~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~  296 (398)
                      ++.|..|....+  ..|++++++  +++++.++...    ...+++. +...+.|++.+++.  .+++...+    .+++
T Consensus       254 ~~~Sg~K~g~~~--~GG~i~~~d--~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~  325 (460)
T PRK13238        254 LTMSAKKDAMVN--IGGLLCFRD--EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV  325 (460)
T ss_pred             EEEecccCCCCc--ceeEEEcCh--HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence            334445543211  135677775  67888887663    2223444 44447777766654  22333333    3357


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCC-------------CC
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGC-------------RG  356 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~  356 (398)
                      ++|.+.|.+.|. .+..|.+++|+++++.+..       -.+.+++.+|+++.||.+.|++.|..             .+
T Consensus       326 ~~l~~~L~~~G~-~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~  404 (460)
T PRK13238        326 EYLGEGLEEAGV-PIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAE  404 (460)
T ss_pred             HHHHHHHHHCCC-CeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccc
Confidence            888888888765 7788999999999885421       13578999999999999999987631             36


Q ss_pred             eEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 015890          357 HLRISFGG--LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       357 ~iRi~~~~--~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+|+++++  -+.++++.+.++|.+..++
T Consensus       405 ~~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        405 LLRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             eEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            89999997  5889999999999887644

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.6e-33  Score=233.25  Aligned_cols=354  Identities=20%  Similarity=0.316  Sum_probs=264.5

Q ss_pred             HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHH----HhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCC--
Q 015890           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVK----ELVWD----PSISKYGADEGLPELRDALVKKLNQENKL--   87 (398)
Q Consensus        18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~----~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--   87 (398)
                      .|.++....+. .+.+.++.|.|...  |++.+...    +.+.+    ....+|..++|...+.+++++.+.+.+|.  
T Consensus        19 lMdDl~d~Lrt-~g~imLggGNPa~i--Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwni   95 (417)
T COG3977          19 LMDDLNDGLRT-PGAIMLGGGNPARI--PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNI   95 (417)
T ss_pred             HHHHHHhhccC-CCceeeCCCCcccC--hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCC
Confidence            34555544443 44888888866543  44443322    22222    22678988999999999999999999964  


Q ss_pred             CCCcEEEecChHHHHHHHHHHhcc---CC--CEEEEe-CCCCcChhhHHHhcCcEEEEecc---CCCC---CCCCChHHH
Q 015890           88 YKSSVMVTAGANQAFVNIVLTLCD---AG--DSVVMF-APYYFNSYMSFQMTGVTHILVGP---CSSK---TLHPDADWL  155 (398)
Q Consensus        88 ~~~~v~~~~g~t~a~~~~~~~l~~---~g--d~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~---~~~~---~~~~d~e~l  155 (398)
                      +.+||.+|+|+..+.+.++-.+.+   .|  .+|++| .|.|-+|..+--.-. -.+.++|   ..+.   .+++|.+++
T Consensus        96 t~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l  174 (417)
T COG3977          96 TAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHL  174 (417)
T ss_pred             ccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHc
Confidence            688999999999999999887753   23  367775 899988876321111 1122212   1222   246677666


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc---ccccCCcEEEEcccccc
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH---CCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~---~~~~~~~~i~~~s~sK~  231 (398)
                      .-.  +.  +.+|+++.|.||||.+++++++.+|-+++++||+++++|.+| .+|.+.-+   .....+|.+.|.|+||.
T Consensus       175 ~i~--e~--~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~  250 (417)
T COG3977         175 HIG--ES--TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL  250 (417)
T ss_pred             ccc--cc--cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhc
Confidence            543  33  589999999999999999999999999999999999999999 66655433   33456899999999994


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHH-----HHHHHHHHhc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR-----NREIIREALS  304 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~-----~~~~l~~~l~  304 (398)
                       |+||.|+|.++.+   ++++..+.......+..+..+.++.+..+++.++  ..-++..+-..+     ....++..+.
T Consensus       251 -GLPG~R~GIiIan---e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp  326 (417)
T COG3977         251 -GLPGSRCGIIIAN---EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLP  326 (417)
T ss_pred             -CCCCcceeEEEcc---HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcC
Confidence             7999999999999   8999999988887788888899999999999754  222333333333     3344555665


Q ss_pred             cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------CCCeEEEEecCCCHHHHHHHHH
Q 015890          305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------CRGHLRISFGGLVEDDCKAAAD  375 (398)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---------~~~~iRi~~~~~~~~~~~~~~~  375 (398)
                      +.++ .++.|+|+.|.|+-+.....+..++.++| +..|+.+.||..|-         ...++|+++.. +.+++++++.
T Consensus       327 ~~~~-~iHkpEGAIFlWLWf~dLPItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~Gva  403 (417)
T COG3977         327 EYRC-LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKGVA  403 (417)
T ss_pred             ccce-eeecCCcceeehhhhccCCCCHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHHHH
Confidence            5666 78899999999999887777899999987 68999999999762         24689999995 8899999999


Q ss_pred             HHHHHHHHHhc
Q 015890          376 RLRRGLEELVK  386 (398)
Q Consensus       376 ~l~~~~~~~~~  386 (398)
                      +|.+.+++.-+
T Consensus       404 ~lae~ve~~yq  414 (417)
T COG3977         404 ILAEEVERAYQ  414 (417)
T ss_pred             HHHHHHHHHHh
Confidence            99999887654

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=5.6e-33  Score=262.19  Aligned_cols=337  Identities=18%  Similarity=0.178  Sum_probs=245.9

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVN  104 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~  104 (398)
                      .+.+.|+.+.... .|+.+++++.+.+.+...    ..+.......+..+.+.+.+.+++|. ++++|++++|+|++++.
T Consensus        18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~   96 (401)
T PRK10874         18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL   96 (401)
T ss_pred             CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence            3578888887663 578999999888754210    01101111233334444445555577 68899999999999999


Q ss_pred             HHHHhc----cCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          105 IVLTLC----DAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       105 ~~~~l~----~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      ++.++.    ++||+|++++++|++    +...++..|++++.+ +.+.+ +.+|++++++.+++++  ++|++++++||
T Consensus        97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~i~~~~n~  172 (401)
T PRK10874         97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL-PLGAD-RLPDVDLLPELITPRT--RILALGQMSNV  172 (401)
T ss_pred             HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE-ecCCC-CcCCHHHHHHhcCcCc--EEEEEeCCccc
Confidence            999983    789999999999965    455667889999998 77653 5789999999998765  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      ||.++|   +++|+++|+++|+++|+|++| ++.....  ....+.++++.|++|.+|++|  +|+++.+   +++++.+
T Consensus       173 tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~~~--~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~~~~~~  242 (401)
T PRK10874        173 TGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFPAD--VQALDIDFYAFSGHKLYGPTG--IGVLYGK---SELLEAM  242 (401)
T ss_pred             ccCcCC---HHHHHHHHHHcCCEEEEECCcccccccCC--chhcCCCEEEEecccccCCCc--cEEEEEc---hHHHhcC
Confidence            999999   889999999999999999999 4432222  122235588899999988776  5998888   6776655


Q ss_pred             HHhhc---------------------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          256 LKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       256 ~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      .....                     ....+.+.+.+.++.++++... ....+..++..+.++++.+.|++++++.+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~  322 (401)
T PRK10874        243 SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFR  322 (401)
T ss_pred             CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence            32210                     1123556667777777776421 2234566777788899999998886656665


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++.+.++++.++.  .+..++.+.| .++||.+++|..|.        ..++||+|++. .+++|++++++.|+++++.+
T Consensus       323 ~~~~~i~~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        323 CQDSSLLAFDFAG--VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             CCCCcEEEEEECC--cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence            4445666667653  2466777766 58999999988763        35899999998 89999999999999887753

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=7.4e-33  Score=261.12  Aligned_cols=333  Identities=18%  Similarity=0.182  Sum_probs=244.7

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCC-------CcHHHHHHHHHHHhhhcCCC-CCcEEEecChHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADE-------GLPELRDALVKKLNQENKLY-KSSVMVTAGANQ  100 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-------~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~  100 (398)
                      ++++.|+.+... +.|+.+++++.+.+.... ...+....       ...++|+.+++++    +.+ +++|++++|+|+
T Consensus        15 ~~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~t~g~t~   89 (398)
T TIGR03392        15 DGTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAENIVWTRGTTE   89 (398)
T ss_pred             CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChHH
Confidence            367888888766 357899999988774321 11121111       1234555555555    764 789999999999


Q ss_pred             HHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890          101 AFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus       101 a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      +++.++.++    .++||+|++++++|++    +...++..|++++.+ +.+.+ +.+|++.+++.+++++  ++|++++
T Consensus        90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~~i~~~t--~lv~i~~  165 (398)
T TIGR03392        90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKL-PIGAD-LLPDIRQLPELLTPRT--RILALGQ  165 (398)
T ss_pred             HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHHhccCc--eEEEEEC
Confidence            999999988    4789999999999976    445668889999999 77654 4689999999998765  9999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      ++||||.++|   +++|+++|+++|+++++|++| ++......  ...+.++++.|.+|.+|++|  +||++.+   +++
T Consensus       166 ~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~--~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~~  235 (398)
T TIGR03392       166 MSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGPPDV--QALDIDFYAFSGHKLYGPTG--IGVLYGK---TEL  235 (398)
T ss_pred             ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCCCCh--hhcCCCEEEEecccccCCCc--eEEEEEc---HHH
Confidence            9999999999   889999999999999999999 44322211  12234578889999888666  7999988   677


Q ss_pred             HHHHHHhhc---------------------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          252 ATQLLKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       252 ~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      ++.+.....                     ....+.+.+.+.++.++++... ..+++..++..+.++++.+.|++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~  315 (398)
T TIGR03392       236 LEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGF  315 (398)
T ss_pred             HhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            666532211                     0123556666777777766411 224566677788889999999888665


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .+..+..+.++++.++.  .+..++...| .++||.+++|..|.        .+++||+|++. .+++|++++++.|+++
T Consensus       316 ~~~~~~~~~i~~~~~~~--~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~  392 (398)
T TIGR03392       316 RSFRCPGSSLLAFDFAG--VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA  392 (398)
T ss_pred             EEeCCCCCcEEEEEeCC--cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence            66544445566666653  3566777776 58999999998763        35799999998 8999999999999988


Q ss_pred             HHHH
Q 015890          381 LEEL  384 (398)
Q Consensus       381 ~~~~  384 (398)
                      ++.+
T Consensus       393 ~~~~  396 (398)
T TIGR03392       393 LELL  396 (398)
T ss_pred             HHHh
Confidence            7753

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=3.7e-32  Score=248.84  Aligned_cols=302  Identities=16%  Similarity=0.141  Sum_probs=227.4

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe---
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF---  119 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~---  119 (398)
                      ..+|.+.++..+.+..     |+   |..++.+.+.+.+.+.+|.+++++++++|+++++..++.++.++||+|+++   
T Consensus        33 ~~~~~~~~~~~~~~~~-----~~---g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d  104 (346)
T TIGR03576        33 AGGFKIDEEDLELLET-----YV---GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPE  104 (346)
T ss_pred             CCChhHHHHHHHHHHH-----hc---CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCC
Confidence            3578888888887655     21   345666777777777778888999999999999999999999999999975   


Q ss_pred             CCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890          120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (398)
Q Consensus       120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (398)
                      .|+|..+...++..|++++.+         .+++.++. . ++  +++|+++ +++++|.+++.+++++|+++|+++|++
T Consensus       105 ~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~--~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~  170 (346)
T TIGR03576       105 KPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DG--TSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAI  170 (346)
T ss_pred             CCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cC--ceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCE
Confidence            468888888899999876432         14454432 2 23  4788775 578999999999999999999999999


Q ss_pred             EEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHH
Q 015890          200 LVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL  275 (398)
Q Consensus       200 livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  275 (398)
                      +++||+| ...   .+..... ..+..+++.|+||+  ++|+|+||++++   +++++.+......+.++.+++.++++.
T Consensus       171 livDEAy~~~~~~~~~~~~~~-~~~~divv~s~SKa--laG~r~G~v~~~---~~li~~l~~~~~~~~~s~~~~~~~aa~  244 (346)
T TIGR03576       171 VLVDDASGARVRRLYGQPPAL-DLGADLVVTSTDKL--MDGPRGGLLAGR---KELVDKIKSVGEQFGLEAQAPLLAAVV  244 (346)
T ss_pred             EEEECCccccccccCCCCCHH-HcCCcEEEeccchh--ccccceEEEEeC---HHHHHHHHHhhcCcccCccHHHHHHHH
Confidence            9999999 322   1221111 11234778899994  579999999999   889999988877666677888999999


Q ss_pred             HHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-C
Q 015890          276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-C  354 (398)
Q Consensus       276 ~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~  354 (398)
                      ++|+...  .+...+.++++++.+.+.++.+   .+..++ ++|+|++++..  ++.+++.++++++||.++|+..|. .
T Consensus       245 ~aL~~~~--~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-~~f~~~~~~~~--~~~~~~~~ll~~~gV~v~~~~~f~~~  316 (346)
T TIGR03576       245 RALEEFE--LSRIRDAFKRKEEVYLRLFDKL---NVERTP-TGFVIKGVEEE--KLIEIGLDLLRNYGIITITAVGMPGA  316 (346)
T ss_pred             HHHhhcc--HHHHHHHHHHHHHHHHHHHHhC---CCCcCC-CeEEEEeCCCC--CHHHHHHHHHHhCCEEEeCCcccCCC
Confidence            9997522  2455666777777777777643   344444 66899998642  355777788889999999998773 4


Q ss_pred             CCeEEEEecCCCHH---HHHHHHHHHHHHH
Q 015890          355 RGHLRISFGGLVED---DCKAAADRLRRGL  381 (398)
Q Consensus       355 ~~~iRi~~~~~~~~---~~~~~~~~l~~~~  381 (398)
                      ++++||+++. .++   +++.++++|++.+
T Consensus       317 ~~~vRis~~~-~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       317 SKTLRFDLAA-KDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             CCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence            7899999997 443   6888888887654

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=8.2e-32  Score=253.89  Aligned_cols=329  Identities=17%  Similarity=0.144  Sum_probs=241.1

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCC---Cc----HHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADE---GL----PELRDALVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~----~~~~~~l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      +|+++++|+.|+. +++.+|++.+++.+++.+.. .+|+.+.   |.    .++++.+++++    +.  +++++++|++
T Consensus        36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~~~~~  108 (393)
T TIGR01822        36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILYASCF  108 (393)
T ss_pred             CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEECchH
Confidence            7889999999984 77889999999999886532 3455554   65    56666777666    43  4677778999


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGN  175 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~n  175 (398)
                      +|+..++.+++++||.|+++.|+|+++...++..+.+.+.+ +      ..|++++++.+++    ++++++|++.+++|
T Consensus       109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~-~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  181 (393)
T TIGR01822       109 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-A------NNDMADLEAQLKEARAAGARHRLIATDGVFS  181 (393)
T ss_pred             HHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhhhcCCCceEEEEeCCcc
Confidence            99999999999999999999999999988888888776555 2      3588999998874    12358888888999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc------cccccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK------HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~------~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      |||.+.+   +++|+++|++||+++|+||+| +++.+..      ......+.+++++|+||+++  |+|+||++++   
T Consensus       182 ~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~---  253 (393)
T TIGR01822       182 MDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTAR---  253 (393)
T ss_pred             CCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeC---
Confidence            9999998   999999999999999999999 5543211      01111245688999999985  6799999998   


Q ss_pred             HHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890          249 EGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  326 (398)
Q Consensus       249 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      +++++.+......  ...+.++..+.++.++++.. +..++..++++++++++.+.|++.+. .+..+. +.++.+.++.
T Consensus       254 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~  330 (393)
T TIGR01822       254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEAAGF-DIKPAD-HPIIPVMLYD  330 (393)
T ss_pred             HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCC
Confidence            7888877653322  22233455555566666532 22456677888889999998887654 444444 3445555443


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      . .+..+++..|+ ++||.+. +..|.    ....+|++++. .+++++++++++|.++++++
T Consensus       331 ~-~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~  390 (393)
T TIGR01822       331 A-VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL  390 (393)
T ss_pred             H-HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            2 24567888876 6799997 44332    22469999888 78999999999999887654

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=7.1e-32  Score=254.90  Aligned_cols=336  Identities=18%  Similarity=0.113  Sum_probs=245.1

Q ss_pred             HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      ++|+++++|+.|. ++++++|.+.+++.+.+.+...  ..|....|..++++.+++++.+.++.+ ++|++++| ++++.
T Consensus        39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~  116 (397)
T PRK06939         39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANG  116 (397)
T ss_pred             cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHH
Confidence            4789999999987 6777899999999988865321  122224577889999999999888754 66777777 68999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCcc
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~  179 (398)
                      .++.+++++||.|++++|+|+++...++..|.+++.+ +.      .|++.+++.++.    .+++++|++.+.+|++|.
T Consensus       117 ~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~  189 (397)
T PRK06939        117 GLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGD  189 (397)
T ss_pred             HHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCC
Confidence            9999999999999999999999998889999988777 43      378888888763    223577887778899999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC---cc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR---KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~---~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      ..+   +++|.++|+++|+++|+||+| +++.+.   ..   .....+.+++++|+||+++  |+|+||++++   ++++
T Consensus       190 ~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~---~~~~  261 (397)
T PRK06939        190 IAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR---KEVI  261 (397)
T ss_pred             cCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---HHHH
Confidence            777   999999999999999999999 543221   11   1111235689999999994  5589999998   7888


Q ss_pred             HHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890          253 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  330 (398)
Q Consensus       253 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      +.+.......  ..+.+...++++.++++.. ....+.++++.++++.+.+.|++.+. .+..+.+++ +++.++.. .+
T Consensus       262 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~-~~~~~~~~-~~  337 (397)
T PRK06939        262 DWLRQRSRPYLFSNSLAPAIVAASIKVLELL-EESDELRDRLWENARYFREGMTAAGF-TLGPGEHPI-IPVMLGDA-KL  337 (397)
T ss_pred             HHHHHhCccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCE-EEEEECCH-HH
Confidence            8876543221  2222344455555555431 12246677888889999999988764 444455444 33344322 24


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..+++.+|+ ++||.+.++.+..   ..++||++++. .+++++++++++|.+++++.
T Consensus       338 ~~~~~~~L~-~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        338 AQEFADRLL-EEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             HHHHHHHHH-HCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            567888887 5699998654321   23689999977 78999999999999888764

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.9e-32  Score=225.16  Aligned_cols=328  Identities=24%  Similarity=0.354  Sum_probs=259.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      -|++++.++.+.++..|+|+-++-         -..| +......++.+++.-    -+..+++++++-|+-+.++++++
T Consensus        39 ~G~~iv~ld~~e~~ryPdP~q~ef---------k~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~iiR  104 (375)
T KOG0633|consen   39 LGRDIVKLDANENPRYPDPEQMEF---------KYVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDLIIR  104 (375)
T ss_pred             cCCCceEeccccCCCCcCHHHccc---------cccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHHHHh
Confidence            367889999888888778876441         1234 333334444444433    36789999999999999999999


Q ss_pred             HhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ..+.|| ++|+...|+|.-|..-+...+++++.+ |... +|+++.|.+.+.++....+|++++++|+||||.++..+++
T Consensus       105 ~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkv-pl~p-dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di  182 (375)
T KOG0633|consen  105 CVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKV-PLNP-DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDI  182 (375)
T ss_pred             heecCCccceeecCCcceeEEEEeecCCceEEEe-cCCC-CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHH
Confidence            999999 899999999988888888889999999 7765 5889999999999977668999999999999999998888


Q ss_pred             HHHHHHHHHcCCEEEEeeceeccCCCc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          187 KRISDLCKAAGSWLVVDNTYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~~~~~~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      .+|.+.-.  |.++++||+|..|+|..   ....++++.+++.++||.||++|+|+|+-.++   ..+++-+.+...  +
T Consensus       183 ~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~---~~ia~iln~~Ka--P  255 (375)
T KOG0633|consen  183 LKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP---LSIAEILNRAKA--P  255 (375)
T ss_pred             HHHHhCCC--CcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc---HHHHHHHHhccC--C
Confidence            88887544  78999999996655532   23346899999999999999999999999999   788888888876  8


Q ss_pred             CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccCCccEEEEeeCCCCC-CChHHHHHHHHH
Q 015890          264 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKH-LDDFEVVRWLAH  340 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~  340 (398)
                      ++.+.+...++.+++.. .-..++..+..+.+.+.++...|..+++. .+.++..++|+.+++.... .-+..+..+++.
T Consensus       256 YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at  335 (375)
T KOG0633|consen  256 YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDAT  335 (375)
T ss_pred             ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHH
Confidence            88888888888888885 23678888999999999999999888763 4556666899999986432 124456667778


Q ss_pred             hcCeEEecCC-CCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          341 RHGVVVIPGG-ACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       341 ~~gi~v~~g~-~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      .+||.|+--. -.+..|++||+++.  +|+-+-+++.++++
T Consensus       336 ~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k~~K~~  374 (375)
T KOG0633|consen  336 KMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMKCLKQF  374 (375)
T ss_pred             hcceEEEEcCCccccceeEEEEcCC--cccchHHHHHHHhh
Confidence            9999997533 23467899999996  45556666666654

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=5.5e-32  Score=258.01  Aligned_cols=336  Identities=16%  Similarity=0.165  Sum_probs=249.7

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|++++||+.+. ..+..+|++.+++.+++.+...      ..|++..+..++++++++++    +. ++.|++++|.+ 
T Consensus       107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~~-~~~i~~s~G~~-  180 (481)
T PLN02822        107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----GT-PDSILYSYGLS-  180 (481)
T ss_pred             CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----CC-CCEEEECCHHH-
Confidence            678999999885 4666899999999999876321      13555566788888888887    32 46788888776 


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---c----CCCC-eEEEEeC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T----KPTP-KLVSVVN  172 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~----~~~~-~~v~i~~  172 (398)
                      ++..++.+++++||.|++....|..+...++..|.+++.+ +.+      |.+.++..++   .    .+.+ ++|+++.
T Consensus       181 a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~-~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~  253 (481)
T PLN02822        181 TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYF-KHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEA  253 (481)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEE-CCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence            6899999999999999988887777777788888888888 432      3344444332   1    1123 6888888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcc----ccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      +++++|.+.|   +++|.++|++||+++|+||+| ++ ++  |...    .....+.+++++|+||.+|.+|   ||+++
T Consensus       254 i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g  327 (481)
T PLN02822        254 IYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTG  327 (481)
T ss_pred             CCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEc
Confidence            9999999999   899999999999999999999 33 22  3211    1111245688999999998888   99999


Q ss_pred             cCCcHHHHHHHHHhhccCCCCcc--hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890          245 PSEVEGFATQLLKVQDNIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  322 (398)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  322 (398)
                      +   +++++.++.......++.+  +..+.++.++|+..+. ..+..++++++++++++.|++..++.+..+.+++++++
T Consensus       328 ~---~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l  403 (481)
T PLN02822        328 S---ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFL  403 (481)
T ss_pred             C---HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEE
Confidence            8   7888887755544455544  6667777778864222 25677889999999999998874446666666888888


Q ss_pred             eCCCCC----CC---hHHHHHHHHHhcCeEEecCCC--CC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          323 RLPEKH----LD---DFEVVRWLAHRHGVVVIPGGA--CG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       323 ~~~~~~----~~---~~~~~~~ll~~~gi~v~~g~~--~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .+++..    .+   ..+++++|++++||.+.++..  +.   .+.++|++++. .+++++++++++|++++.++..
T Consensus       404 ~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~  480 (481)
T PLN02822        404 HLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK  480 (481)
T ss_pred             EeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            886421    01   357888888788999997743  32   24579999887 7999999999999999988753

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=2.5e-31  Score=247.99  Aligned_cols=325  Identities=17%  Similarity=0.175  Sum_probs=233.5

Q ss_pred             HcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCC----cHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890           27 RGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEG----LPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        27 ~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~~----~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      .+|++++||+.|.+ +.+.||++.+++.+++.+...  ..|....+    ..++++.+++++    +. ++++++++|+ 
T Consensus        13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~~-~~~i~~~~G~-   86 (360)
T TIGR00858        13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK----GT-EAALLFSSGY-   86 (360)
T ss_pred             ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh----CC-CCEEEECchH-
Confidence            47899999999953 234569999999998864211  11212223    344556666655    42 5667777765 


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS  177 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt  177 (398)
                      +++..++.+++++||+|+++.|+|..+...++..|.+++.+ +.      +|++.+++.++..  ..+++|++.+++|+|
T Consensus        87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~  159 (360)
T TIGR00858        87 LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRY-RH------NDVEHLERLLEKNRGERRKLIVTDGVFSMD  159 (360)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-cC------CCHHHHHHHHHHcccCCCeEEEEeCCccCC
Confidence            66666778888999999999999999998899999988877 42      4889999998743  124888888999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCC--ccc----cccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGR--KHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~--~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      |...+   +++|.++|+++|+++|+||+| .. +...  ...    ....+++++++|+||+++++|   ||++++   +
T Consensus       160 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~---~  230 (360)
T TIGR00858       160 GDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS---Q  230 (360)
T ss_pred             CCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC---H
Confidence            99988   899999999999999999999 32 3221  111    112357899999999998666   999988   7


Q ss_pred             HHHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      ++++.+.......  ..+.+...++++.++++. .....+..+++.++++++.+.|++++. .+..+ .++++|+.++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~~~~~~  307 (360)
T TIGR00858       231 ALIDYLINRARTLIFSTALPPAVAAAALAALEL-IQEEPWRREKLLALIARLRAGLEALGF-TLMPS-CTPIVPVIIGDN  307 (360)
T ss_pred             HHHHHHHHhCccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHcCC-ccCCC-CCCEEEEEeCCH
Confidence            7877775433222  223445555566667753 122356678888999999999988764 55544 478888888642


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                       .+..++.++|+ ++||.+.++..+.   ..+++|++++. .+.+++++++++|+
T Consensus       308 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       308 -ASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             -HHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence             24567888775 7899999865543   24689999997 68999999988763

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=2.7e-31  Score=250.63  Aligned_cols=337  Identities=15%  Similarity=0.147  Sum_probs=241.1

Q ss_pred             HcCCCeEEcCCcc--CCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  +.++. +|.+.+++.+++....   +.......+++..+++++.+..+  .+++++++|+++|+.
T Consensus        36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~gg~eA~~  110 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG--MDKVFFCNSGAEANE  110 (396)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC--CCEEEECCCcHHHHH
Confidence            4789999999875  44554 6999999999886531   11122336788888888887765  479999999999999


Q ss_pred             HHHHHhccCC-------CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCCC----CCChHHHHHhhccCCCCeEEE
Q 015890          104 NIVLTLCDAG-------DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKTL----HPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       104 ~~~~~l~~~g-------d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~~----~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      .+++.+...+       ++|++..++|+++.......+.....   +.+.. .++    ..|++.+++.+.++  +++|+
T Consensus       111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~vi  187 (396)
T PRK02627        111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITDK--TAAVM  187 (396)
T ss_pred             HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCCC--eEEEE
Confidence            9999775332       67999999999887655444322211   10211 121    22899999999654  59999


Q ss_pred             EeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       170 i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      +++++||+| ..++++.+++|.++|+++|+++|+||+|  +.+.+........+....+.++||.++ +|+|+||++++ 
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~-~G~rig~~~~~-  265 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG-GGVPIGAVLAK-  265 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh-CCcccEEEEEc-
Confidence            998899999 5889999999999999999999999999  655553222111111112347999998 99999999998 


Q ss_pred             CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890          247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL  324 (398)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  324 (398)
                        +++++.+.......+++.+++.++++.++|+..  .++.++..+.....++.+.+.+.+.+.+....+. ++++|+.+
T Consensus       266 --~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~i~~  342 (396)
T PRK02627        266 --EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGL-GLMIGIEL  342 (396)
T ss_pred             --HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccC-cEEEEEEe
Confidence              788887765545567788999999999998752  2333333444444455555555445443333343 78888888


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.   +..+++.+++ ++||.+.|+.    .+++|++++. .+++++++++++|.++++++
T Consensus       343 ~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        343 DR---PAAEIVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             cC---cHHHHHHHHH-HCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence            32   4678888886 6699999863    4789999864 68999999999999988764

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=3.1e-31  Score=250.44  Aligned_cols=347  Identities=14%  Similarity=0.092  Sum_probs=246.9

Q ss_pred             HHHHHHHHHHc---CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCC-CC
Q 015890           18 IMVQIQELVRG---AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKL-YK   89 (398)
Q Consensus        18 ~~~~~~~~~~~---g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~-~~   89 (398)
                      .++..+...++   +.+++.|+.+.... +|+.+++++.+.+.....    ..|.......+..+.+++.+.++++. ++
T Consensus         7 ~~r~~fp~~~~~~~~~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~   85 (406)
T PRK09295          7 KVRADFPVLSREVNGLPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA   85 (406)
T ss_pred             HHHhhCccccCcCCCCceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC
Confidence            34555555442   34678888877553 578899999887753211    11111111223333344444444466 57


Q ss_pred             CcEEEecChHHHHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890           90 SSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus        90 ~~v~~~~g~t~a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      ++|++|+|+|++++.++.++    .++||+|+++.++|++    +...++..|++++.+ +.+.+ +.+|+++|++.+++
T Consensus        86 ~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~  163 (406)
T PRK09295         86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPALFDE  163 (406)
T ss_pred             CeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCCCHHHHHHhcCC
Confidence            89999999999999998874    5789999999998865    445567789999998 77654 46899999999987


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                      ++  ++|++++++||||.++|   +++|.++|+++|+++++|++| ++......  ...+.++++.|++|.+|++|  +|
T Consensus       164 ~t--~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~~~~--~~~~~D~~~~s~~K~~gp~G--~G  234 (406)
T PRK09295        164 RT--RLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHPVDV--QALDCDFYVFSGHKLYGPTG--IG  234 (406)
T ss_pred             Cc--EEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccccCc--hhcCCCEEEeehhhccCCCC--cE
Confidence            65  99999999999999999   899999999999999999999 55433222  22344588899999888666  79


Q ss_pred             EEEccCCcHHHHHHHHHhh----------------------ccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHH
Q 015890          241 YIAYPSEVEGFATQLLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNRE  297 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~  297 (398)
                      +++++   +++++.+....                      .....+.+...+.++.++++...+ .+++..++.+++++
T Consensus       235 ~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~  311 (406)
T PRK09295        235 ILYVK---EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMH  311 (406)
T ss_pred             EEEEc---hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            99988   56655442110                      012336777788888888875222 34666778888899


Q ss_pred             HHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCH
Q 015890          298 IIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVE  367 (398)
Q Consensus       298 ~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~  367 (398)
                      ++.+.|++++++++..+. ....+.+.++.  .+..++...| .++||.++.|+.|.        .++.+|+|++. .++
T Consensus       312 ~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~  388 (406)
T PRK09295        312 YALSQLESVPDLTLYGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH  388 (406)
T ss_pred             HHHHHHhcCCCEEEeCCCCCceEEEEEECC--cCHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence            999999888765666542 13344555553  2466776655 68999999988663        24689999999 899


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          368 DDCKAAADRLRRGLE  382 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~  382 (398)
                      +|++++++.|++...
T Consensus       389 ~did~l~~~l~~i~~  403 (406)
T PRK09295        389 EEVDRLVAGLQRIHR  403 (406)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987643

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=100.00  E-value=3.5e-31  Score=251.37  Aligned_cols=336  Identities=16%  Similarity=0.130  Sum_probs=244.7

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC----CCCCCC----CcHHHHHHHHHHHhhhcCCC-CCcEEEecChH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADE----GLPELRDALVKKLNQENKLY-KSSVMVTAGAN   99 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~----~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t   99 (398)
                      |++++.|+.+... ++|+.+++++.+.+......    .+....    ...++|+.+++++    +.+ +++|++++|+|
T Consensus        30 ~~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t  104 (424)
T PLN02855         30 GSKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNAT  104 (424)
T ss_pred             CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHH
Confidence            4578999988765 56888999998876432111    111111    1235555555555    664 57999999999


Q ss_pred             HHHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890          100 QAFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus       100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      ++++.++.++    +++||+|+++.++|++    +...++..|++++.+ +.+.++ .+|++.+++.+++++  ++|+++
T Consensus       105 ~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v-~~~~~~-~~~~~~l~~~i~~~t--~lv~i~  180 (424)
T PLN02855        105 EAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFV-GLTPDE-VLDVEQLKELLSEKT--KLVATH  180 (424)
T ss_pred             HHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEE-ecCCCC-CcCHHHHHHHhccCc--eEEEEe
Confidence            9999998863    5789999999998865    444567789999988 776544 479999999998754  999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      +++||||.++|   +++|+++|+++|+++++|++| ++.....  ....+.+++++|++|.+|++|  +|+++++   ++
T Consensus       181 ~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g~~~~~--~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~  250 (424)
T PLN02855        181 HVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVPHMPVD--VQTLGADFLVASSHKMCGPTG--IGFLWGK---SD  250 (424)
T ss_pred             CccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCcCCC--chhcCCCEEEeecccccCCCc--cEEEEEc---hh
Confidence            99999999999   889999999999999999999 5543322  222334578999999887555  7999988   56


Q ss_pred             HHHHHHHhh---------------------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          251 FATQLLKVQ---------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       251 ~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      +++.+....                     .....+.+.....++.++++... ..+++..++..+.++++++.|+++++
T Consensus       251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g  330 (424)
T PLN02855        251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG  330 (424)
T ss_pred             hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            665553221                     01123456666777777776422 24567778888889999999988766


Q ss_pred             CccccCC------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHH
Q 015890          309 GAVKGGE------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA  373 (398)
Q Consensus       309 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~  373 (398)
                      ++++.+.      .+.++.+.++.  .+..++...|.+++||.++.|..|.        .++++|+|++. .+++|++++
T Consensus       331 ~~i~~~~~~~~~~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l  408 (424)
T PLN02855        331 VRIYGPKPSEGVGRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF  408 (424)
T ss_pred             EEEeCCCcccccCcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence            5666432      13566667663  2466788877544499999988652        24689999998 899999999


Q ss_pred             HHHHHHHHHHHh
Q 015890          374 ADRLRRGLEELV  385 (398)
Q Consensus       374 ~~~l~~~~~~~~  385 (398)
                      ++.|+++++.+.
T Consensus       409 ~~~l~~~~~~~~  420 (424)
T PLN02855        409 IHALKDTIAFFS  420 (424)
T ss_pred             HHHHHHHHHHHH
Confidence            999999887753

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=5e-31  Score=249.28  Aligned_cols=334  Identities=20%  Similarity=0.189  Sum_probs=241.7

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC--C--CCCCC----CCcHHHHHHHHHHHhhhcCCC-CCcEEEecChH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI--S--KYGAD----EGLPELRDALVKKLNQENKLY-KSSVMVTAGAN   99 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~--~y~~~----~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t   99 (398)
                      |++++.|+.+... ++|+.+.+++.+.+.....  +  .+...    ....++|+.+++++    +.+ +++|++++|++
T Consensus        16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t   90 (403)
T TIGR01979        16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT   90 (403)
T ss_pred             CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence            5678999998876 4578899999887643210  0  11111    12335555555555    776 67999999999


Q ss_pred             HHHHHHHHHh----ccCCCEEEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890          100 QAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus       100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      ++++.++.++    .++||+|+++.+.|++.    ...++..|++++.+ +.+++ +.+|++.+++.+++++  ++|+++
T Consensus        91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~--~lv~~~  166 (403)
T TIGR01979        91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI-PLDDD-GTLDLDDLEKLLTEKT--KLVAIT  166 (403)
T ss_pred             HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE-ecCCC-CCCCHHHHHHHhccCC--eEEEEE
Confidence            9999998875    57899999999988763    34556789999988 77744 4689999999998765  999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      +++||||..+|   +++|.++|+++|+++|+|++| .+......  ...+.++++.|++|.+|++|  +|+++++   ++
T Consensus       167 ~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~--~~~~~d~~~~s~~K~~gp~G--~g~l~~~---~~  236 (403)
T TIGR01979       167 HVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMPVDV--QALDCDFYVFSGHKMYGPTG--IGVLYGK---EE  236 (403)
T ss_pred             cccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCccccCc--cccCCCEEEEecccccCCCC--ceEEEEc---hH
Confidence            99999999999   899999999999999999999 54322211  22345688999999988666  7999888   56


Q ss_pred             HHHHHHHhhc---------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          251 FATQLLKVQD---------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       251 ~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      +++.+.....                     ....+.+...+.++.++++...+ ..++..++..+.++.+.+.|+.+++
T Consensus       237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g  316 (403)
T TIGR01979       237 LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPG  316 (403)
T ss_pred             HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            6665432110                     01124556666666666654222 2466778888889999999988766


Q ss_pred             CccccCCc----cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHH
Q 015890          309 GAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD  375 (398)
Q Consensus       309 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~  375 (398)
                      ++++.+..    +.++.+.++.  .+..++.+.| +++||.+++|..|        +.++++|||++. .+++|++++++
T Consensus       317 ~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~  393 (403)
T TIGR01979       317 LRIYGPRDAEDRGGIISFNVEG--VHPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVE  393 (403)
T ss_pred             EEEeCCCCccccCceEEEEeCC--cCHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHH
Confidence            66665431    4455566653  2456676655 6899999987643        346799999997 78999999999


Q ss_pred             HHHHHHHHH
Q 015890          376 RLRRGLEEL  384 (398)
Q Consensus       376 ~l~~~~~~~  384 (398)
                      .|+++++.+
T Consensus       394 ~l~~~~~~~  402 (403)
T TIGR01979       394 ALKKVRKFF  402 (403)
T ss_pred             HHHHHHHHh
Confidence            999877664

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.8e-30  Score=240.35  Aligned_cols=346  Identities=19%  Similarity=0.153  Sum_probs=261.9

Q ss_pred             HHHHHHHHHc--CCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-Cc
Q 015890           19 MVQIQELVRG--AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYK-SS   91 (398)
Q Consensus        19 ~~~~~~~~~~--g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~   91 (398)
                      +++.++.+.+  +++++.|+.+.... .|..+++++.+.+..    .....|.......+..+..++.++++.+.++ ++
T Consensus         8 ~r~~fp~l~~~~~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~e   86 (405)
T COG0520           8 VRADFPALKREVGKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDE   86 (405)
T ss_pred             HHhhCHHHhhccCCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            5555555555  56889999887766 699999999987742    1122333333334444555555555558884 89


Q ss_pred             EEEecChHHHHHHHHHHh---ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890           92 VMVTAGANQAFVNIVLTL---CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l---~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~  164 (398)
                      |++|+|+|++++.+..++   .++||+|++..-.|++    |....+..|++++.+ |.+++ ..++.|.++..+++++ 
T Consensus        87 Ivft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i-~~~~~-g~~~~~~~~~~i~~~T-  163 (405)
T COG0520          87 IVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVI-PLDDD-GLLDLDALEKLITPKT-  163 (405)
T ss_pred             EEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCc-
Confidence            999999999999999999   5899999999999965    666777789999999 88744 5789999999999887 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccccc-ccCCCcceeEEE
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSK-AYGMMGWRVGYI  242 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~G~r~G~i  242 (398)
                       |+|.+++.+|.||.+.|   +++|+++|+++|+++++|.++ .++.....  ...+-+++.+|.+| .+|+.|  +|.+
T Consensus       164 -klvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~~idv--~~l~~Df~afsgHKwl~gP~G--iGvL  235 (405)
T COG0520         164 -KLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHLPIDV--QELGCDFLAFSGHKWLLGPTG--IGVL  235 (405)
T ss_pred             -eEEEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCccCCCc--hhcCCCEEEEcccccccCCCc--eEEE
Confidence             99999999999999999   999999999999999999999 66644333  23345588999999 445335  7999


Q ss_pred             EccCCcHHHHHHHHHhhc----------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHH
Q 015890          243 AYPSEVEGFATQLLKVQD----------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREII  299 (398)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l  299 (398)
                      +++   +++.+.+.+...                      ....+++.....++.++++...+ .+++..++.+++.+++
T Consensus       236 y~r---~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~  312 (405)
T COG0520         236 YVR---KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL  312 (405)
T ss_pred             EEc---hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            999   777777633211                      11234556666666666665222 2567777888889999


Q ss_pred             HHHhccCCCCccccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecC-CCH
Q 015890          300 REALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGG-LVE  367 (398)
Q Consensus       300 ~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~-~~~  367 (398)
                      .+.|++++.++++++.   ....+.+.++.  ....++...|. ++||.++.|..|..        +..+|+|++. .++
T Consensus       313 ~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~--~~~~dv~~~L~-~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~  389 (405)
T COG0520         313 LEGLSELPGVEIYGPPDADRGGIVSFNVKG--IHPHDVATLLD-EKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE  389 (405)
T ss_pred             HHHHhcCCCeEEecCCcccCceEEEEEeCC--CCHHHHHHHHH-hCCeEEEeccccccHHHHhcCCCCceEEEEeecCCH
Confidence            9999999988888765   34555666654  35788888774 78899999988853        3459999999 899


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          368 DDCKAAADRLRRGLE  382 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~  382 (398)
                      +|++++++.|+++.+
T Consensus       390 edid~l~~aL~~~~~  404 (405)
T COG0520         390 EDVDRLLEALKKALA  404 (405)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999998764

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=1.2e-30  Score=245.31  Aligned_cols=334  Identities=19%  Similarity=0.165  Sum_probs=245.1

Q ss_pred             HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|++++||+.++ ++++++|.+.+++.+++....  ...|....|..++++.+++++++.++. ++.+++++| ++++.
T Consensus        30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG-~~a~~  107 (385)
T TIGR01825        30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSG-FNTNQ  107 (385)
T ss_pred             ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHH
Confidence            4689999999986 677789999999998876422  345666778899999999999988775 356777666 57788


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~  181 (398)
                      .++.+++++||.|+++.|.|..+...+...|.++..+ +      .+|++++++.++..  +.+++|++.+++||||.+.
T Consensus       108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~  180 (385)
T TIGR01825       108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIY-K------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA  180 (385)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc
Confidence            8888999999999999999998887778888877665 2      35788888877632  1258888888899999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      +   +++|.++|++||+++|+||+| .. +.  +..   ......+.++++.|+||.+|++|   ||++.+   +++++.
T Consensus       181 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~---~~~~~~  251 (385)
T TIGR01825       181 P---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH---KELIEY  251 (385)
T ss_pred             C---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC---HHHHHH
Confidence            9   899999999999999999999 32 32  211   11122567899999999997665   999988   788887


Q ss_pred             HHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          255 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       255 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +......+  ....+++.+.++.++++...+. .+..+++.++++++.+.|++.+. .+..+. +.++.+.++.. .+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~-~~~~  327 (385)
T TIGR01825       252 LKNRARPFLFSTAQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGKLGY-DTGGSE-TPITPVVIGDE-KAAQ  327 (385)
T ss_pred             HHHhCccccccCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEECCH-HHHH
Confidence            76543211  2234566677777777642121 24556667788888888887754 555555 34555554421 1356


Q ss_pred             HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++..|+ ++||.+++.....   ...+||++++. .+++++++++++|++++++
T Consensus       328 ~~~~~L~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~  381 (385)
T TIGR01825       328 EFSRRLF-DEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE  381 (385)
T ss_pred             HHHHHHH-HCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            7888887 5699986433322   23689999875 7999999999999998865

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=2.1e-30  Score=241.10  Aligned_cols=321  Identities=19%  Similarity=0.159  Sum_probs=233.1

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      +.+.|+.+++++.+.+..   +.| +  ...++.+.+.+.+++.+|+++ +.+++++|+++++..++.+++++||+|+++
T Consensus         7 ~~~~~~~v~~a~~~~~~~---~~~-~--~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~   80 (356)
T cd06451           7 PSNVPPRVLKAMNRPMLG---HRS-P--EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVG   80 (356)
T ss_pred             CcCCCHHHHHHhCCCccC---CCC-H--HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEe
Confidence            556789999999765422   222 2  334556666666666668754 457888988999999999999999999999


Q ss_pred             CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (398)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (398)
                      .++|++  +...++..|++++.+ +.+++ +.+|++++++.+++.+ +++|++++++||+|.+.|   +++|.++|+++|
T Consensus        81 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~-~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~  154 (356)
T cd06451          81 VNGVFGDRWADMAERYGADVDVV-EKPWG-EAVSPEEIAEALEQHD-IKAVTLTHNETSTGVLNP---LEGIGALAKKHD  154 (356)
T ss_pred             cCCchhHHHHHHHHHhCCCeEEe-ecCCC-CCCCHHHHHHHHhccC-CCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence            998876  456778899999998 77654 4789999999998622 599999999999999999   888999999999


Q ss_pred             CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH---hhc-------------
Q 015890          198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK---VQD-------------  260 (398)
Q Consensus       198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~---~~~-------------  260 (398)
                      +++++|++| ++......  ...+.++++.|.+|+++.| .++||++.+   +++++.+..   ...             
T Consensus       155 ~~li~D~~~~~g~~~~~~--~~~~~d~~~~s~~K~l~~p-~g~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (356)
T cd06451         155 ALLIVDAVSSLGGEPFRM--DEWGVDVAYTGSQKALGAP-PGLGPIAFS---ERALERIKKKTKPKGFYFDLLLLLKYWG  228 (356)
T ss_pred             CEEEEeeehhccCccccc--cccCccEEEecCchhccCC-CCcceeEEC---HHHHHHHHhcCCCCceeecHHHHHhhhc
Confidence            999999998 54322211  1223346778999999743 468999998   677766653   000             


Q ss_pred             ---cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCCCCChHH
Q 015890          261 ---NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       261 ---~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  333 (398)
                         ....+++...+.++.++++. ....+++..++..++++++.+.|...+. .+..++   .+.++++.++.. .+..+
T Consensus       229 ~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~-~~~~~  306 (356)
T cd06451         229 EGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL-KLLAKPELRSPTVTAVLVPEG-VDGDE  306 (356)
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCCceEEEECCCC-CCHHH
Confidence               12233455555666666654 1234567777888888999999987754 444321   234456666543 36778


Q ss_pred             HHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +++.|.+++||.+.+|..+..+++||++++. .+++|+++++++|++++
T Consensus       307 ~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         307 VVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             HHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            8888864349999998766556799999987 68999999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=2.8e-30  Score=243.03  Aligned_cols=330  Identities=16%  Similarity=0.121  Sum_probs=236.0

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|++++||..|.+ ++.++|++++++.+.+....  ...|....+...+++.+++.+.+.++. ++ .++++++++++..
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~-~i~~~~g~~~~~~  114 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ER-ALLFSSGYAANLA  114 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-Cc-EEEECcHHHHHHH
Confidence            7899999999864 34568999999999886521  112222334455566666666665563 44 4445556678777


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCH
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~  183 (398)
                      ++..++++||.|+++.|.|+.+...++..|.+++.+ +.      .|++.+++.++.. ...+++++.+++|++|...+ 
T Consensus       115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~-  186 (385)
T PRK05958        115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRY-PH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP-  186 (385)
T ss_pred             HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC-
Confidence            888889999999999999999988888889888877 43      3788999998753 12466777788999999888 


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                        +++|+++|+++|+++|+||+| .. +.  +...    .....++++++.|+||.+|.+|   ||++.+   +++.+.+
T Consensus       187 --l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~---~~~~~~~  258 (385)
T PRK05958        187 --LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS---ETLIDYL  258 (385)
T ss_pred             --HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC---HHHHHHH
Confidence              999999999999999999999 43 22  2111    1112456788999999998666   898888   7777776


Q ss_pred             HHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          256 LKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       256 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      ......  ...+.++..++++.++++..... .+..+++.++++++.+.|+..+. .+..+. +.++++.++.. .+..+
T Consensus       259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~  334 (385)
T PRK05958        259 INRARPFIFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRALGF-QLMDSQ-SAIQPLIVGDN-ERALA  334 (385)
T ss_pred             HHhCccceecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHHH
Confidence            543221  12334555555666677642221 45667788888899999887764 555555 66777887642 24567


Q ss_pred             HHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      ++++|. ++||.+.++..+.   .++++||+++. .+++++++++++|+++
T Consensus       335 ~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        335 LAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA  384 (385)
T ss_pred             HHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence            888875 7899998854332   24689999986 6899999999999875

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=100.00  E-value=2.6e-30  Score=240.83  Aligned_cols=349  Identities=13%  Similarity=0.116  Sum_probs=254.4

Q ss_pred             HHHHHHHcCCCeEEcCCccC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890           21 QIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT   95 (398)
Q Consensus        21 ~~~~~~~~g~~~~~l~~g~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~   95 (398)
                      +.+++.+.|.+.+.|..+++  ++..+.   .+.+++.+++..+. ..|..+.+..+++++++++++      .++++++
T Consensus         2 r~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g------~~~vv~t   74 (431)
T cd00617           2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG------FKHIIPT   74 (431)
T ss_pred             hHHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC------CCeEEEc
Confidence            34566788999999999998  665443   55555555555443 459999999999999999984      3579999


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC---------CCCCChHHHHHhhccC--CC
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PT  164 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~e~l~~~l~~~--~~  164 (398)
                      +|+++|+..++.+++++||.| ++.|.|..+...+...|.+++.+ +.++.         .+.+|++.|++.++++  ..
T Consensus        75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v-~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~  152 (431)
T cd00617          75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDL-VIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN  152 (431)
T ss_pred             CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEE-ecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence            999999999999999999987 68899989988899999999998 77532         2349999999999865  22


Q ss_pred             CeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec---c-----CCCccccccCCcEEEEcccccccCC
Q 015890          165 PKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM---Y-----DGRKHCCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       165 ~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~---~-----~~~~~~~~~~~~~i~~~s~sK~~~~  234 (398)
                      +++|+++.|+||+ |..++.+++++|.++|++||+++|.|+++ +.   +     ++...... .+.++.++|++|.+.+
T Consensus       153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si-~ei~~e~~s~sd~~~m  231 (431)
T cd00617         153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI-AEIAREMFSYADGCTM  231 (431)
T ss_pred             ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-HHHHHHhhccCCEEEE
Confidence            5889999999998 99999999999999999999999999997 21   2     12111111 0112334566666666


Q ss_pred             Ccce------eEEEEccCCcHHHHHHHHHhh----ccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          235 MGWR------VGYIAYPSEVEGFATQLLKVQ----DNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       235 ~G~r------~G~i~~~~~~~~~~~~l~~~~----~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +|++      .||+++++  ++++++++...    ... ..+.+....++++.+|+...+  .+..+...++++++.+.|
T Consensus       232 S~~K~~~~~~GG~i~~~d--~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L  307 (431)
T cd00617         232 SAKKDGLVNIGGFLALRD--DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVEQVRYLGDRL  307 (431)
T ss_pred             EeecCCCCccceEEEeCc--HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence            6665      57999985  56888876432    111 122344444554446654211  123333344568899999


Q ss_pred             ccCCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEec-CCC-CC-----------CCCeEEEEec
Q 015890          304 SPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIP-GGA-CG-----------CRGHLRISFG  363 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~-g~~-~~-----------~~~~iRi~~~  363 (398)
                      ++.|. .+..|.+++++|++.+...       -++.+++.+|+++.||.+.. |+. ++           ....+|+++.
T Consensus       308 ~~~G~-~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p  386 (431)
T cd00617         308 DEAGV-PIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP  386 (431)
T ss_pred             HHCCC-CccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc
Confidence            98876 7777888999999976421       14788898999999999754 331 11           1268999988


Q ss_pred             C--CCHHHHHHHHHHHHHHHHHH
Q 015890          364 G--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       364 ~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +  -+.++++...+.|...+++-
T Consensus       387 rr~~t~~~~~~~~~~~~~~~~~~  409 (431)
T cd00617         387 RRVYTQDHMDYVAAAVIALYERR  409 (431)
T ss_pred             ccccCHHHHHHHHHHHHHHHhhH
Confidence            7  68899999999999888763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK02948 cysteine desulfurase; Provisional

Probab=100.00  E-value=6.8e-31  Score=246.40  Aligned_cols=336  Identities=15%  Similarity=0.100  Sum_probs=240.9

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      +.|+.+... ++|+.+++++.+.+....   ...|.......++.+.+.+.+.+.++.++++|++++|+++++..++.++
T Consensus         2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~   80 (381)
T PRK02948          2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL   80 (381)
T ss_pred             EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence            456666544 358899999988775321   1111111112334555555555556888899999999999999998887


Q ss_pred             c----cCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890          110 C----DAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       110 ~----~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~  182 (398)
                      .    ++|+.|+++..+|+++.   ..++..|.++..+ +.+++ +.+|+++|++.+++++  ++|++++|+||||.++|
T Consensus        81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~  156 (381)
T PRK02948         81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEI-PVDKS-GLIRLVDLERAITPDT--VLASIQHANSEIGTIQP  156 (381)
T ss_pred             HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEE-eeCCC-CCCCHHHHHHhcCCCC--EEEEEECCcCCcEeehh
Confidence            5    56899999987776544   3457779999988 77654 4689999999998665  89999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH-HHHHH----
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLL----  256 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-~~~l~----  256 (398)
                         +++|.++|+++|+++|+|+++ ++..+.  .....+.++++.|++|.+|++|  +|+++.++   ++ ...+.    
T Consensus       157 ---~~~I~~l~~~~~~~vivD~~~~~g~~~~--~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~~~  226 (381)
T PRK02948        157 ---IAEIGALLKKYNVLFHSDCVQTFGKLPI--DVFEMGIDSLSVSAHKIYGPKG--VGAVYINP---QVRWKPVFPGTT  226 (381)
T ss_pred             ---HHHHHHHHHHcCCEEEEEChhhcccccc--CcccCCCCEEEecHHhcCCCCc--EEEEEEcC---CCCCCCcccCCC
Confidence               889999999999999999877 654322  2223456688999999998777  68887774   22 11111    


Q ss_pred             HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE-----EEEeeCCCCCCCh
Q 015890          257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI-----YLWARLPEKHLDD  331 (398)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  331 (398)
                      .......++.+.+++.++.++++...+++++..+++.++++++.+.|++++. .+......+     .+.+.++.  .+.
T Consensus       227 ~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~i~~~~~~~--~~~  303 (381)
T PRK02948        227 HEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPL-PIEVEGHSTSCLPHIIGVTIKG--IEG  303 (381)
T ss_pred             CCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEeCCCccCcCCEEEEEeCC--CCH
Confidence            0111245688999999999999863356778888999999999999998865 333211111     22223332  245


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .++...| .++||.+++|+.|..                   .+++|+|++. .+++|++++++.|+++++.+.++
T Consensus       304 ~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~  378 (381)
T PRK02948        304 QYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYRG  378 (381)
T ss_pred             HHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            6677766 588999999886421                   3689999998 79999999999999998876654

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=2.2e-30  Score=243.31  Aligned_cols=336  Identities=14%  Similarity=0.173  Sum_probs=232.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ .+|++.+++.+++.+..  ..+. ....+....+++.+.+..+  .+++++++|+++|++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~  102 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLW--HVSN-LYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVE  102 (389)
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcC--cccc-ccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHH
Confidence            5788999998753  3332 58999999999987521  1111 1123344556666655433  468999999999999


Q ss_pred             HHHHHhc----cCCC----EEEEeCCCCcChhhHHHhcCcEEEEe---ccCCCCCCC----CChHHHHHhhccCCCCeEE
Q 015890          104 NIVLTLC----DAGD----SVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSKTLH----PDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~----~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~---~~~~~~~~~----~d~e~l~~~l~~~~~~~~v  168 (398)
                      .+++++.    .+||    +|++.+++|+++...+...+......   .+.. .++.    .|++.+++.++++  +++|
T Consensus       103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~~av  179 (389)
T PRK01278        103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITPN--TAAI  179 (389)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCCC--eEEE
Confidence            9998873    4555    89999999999887665554332221   0111 1122    5899999999764  5999


Q ss_pred             EEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          169 SVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       169 ~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      +++.++|++| ..++.+++++|.++|++||+++|+||+|  +.+.+........+....+.|+||.++ +|+|+||++++
T Consensus       180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~  258 (389)
T PRK01278        180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG-GGFPLGACLAT  258 (389)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc-CCcceEEEEEc
Confidence            9998889998 6889999999999999999999999999  655553222111111122458999998 89999999999


Q ss_pred             CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEEEEe
Q 015890          246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIYLWA  322 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~  322 (398)
                         +++++.+.......+++.+++.++++.++|+...  +..+...+.....++++.+..++.+ .+....+. +.++++
T Consensus       259 ---~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~-G~~~~i  334 (389)
T PRK01278        259 ---EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGK-GLLLGL  334 (389)
T ss_pred             ---HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecc-cEEEEE
Confidence               6788877666666677889999999988887421  2222222222222333333333333 22233343 677777


Q ss_pred             eCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+..   +..+++.+|+ ++||.+.|+.    .+++||+++. .+++++++++++|.+++.+
T Consensus       335 ~~~~---~~~~~~~~l~-~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        335 KCVV---PNRDLVQALR-DEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             EEec---CHHHHHHHHH-HCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence            7753   4678888887 6699999873    5799999765 7899999999999998865

>PRK10534 L-threonine aldolase; Provisional

Probab=100.00  E-value=1e-30  Score=240.78  Aligned_cols=314  Identities=16%  Similarity=0.173  Sum_probs=227.1

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD  111 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~  111 (398)
                      ++||+.+.++. ++|.+++++.+....  ...|++.+...++++++++++    |++  .+++++|+++++..++.+++.
T Consensus         1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~----g~~--~~~v~~~g~~a~~~~l~~~~~   71 (333)
T PRK10534          1 MIDLRSDTVTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS----GKE--AALFLPTGTQANLVALLSHCE   71 (333)
T ss_pred             CcccccccCCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh----CCC--eEEEeCchHHHHHHHHHHhcC
Confidence            47899998888 799999999875544  456878888899999999986    543  346777788889888888899


Q ss_pred             CCCEEEEeCCCCcC-hhhH-HHhcC-cEEEEeccCCCCCCCCChHHHHHhhccCC----CCeEEEEeCCCCCCccCCCHH
Q 015890          112 AGDSVVMFAPYYFN-SYMS-FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----~~~~v~i~~p~nptG~~~~~~  184 (398)
                      +||+|+++.|+|.. +... ....| .+++.+ +.++ ++.+|+++|+++++++.    ++++|++++|+  +|.+++.+
T Consensus        72 ~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~  147 (333)
T PRK10534         72 RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPI-DAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPRE  147 (333)
T ss_pred             CCCeeEEechhhhhHhcCCchHHhcCceEEee-cCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHH
Confidence            99999999888743 3221 23444 677777 6653 46889999999986521    25899999765  59999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc-ccC-CcEEEEcccccccCCCcceeE-EEEccCCcHHHHHHHHH
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC-VEG-DHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLK  257 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~-~~~-~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~l~~  257 (398)
                      ++++|+++|+++++++++||+| +..   .+..... ... +++  +.|+||.+|++   +| |++++   +++++.+..
T Consensus       148 ~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~--~~s~SK~~~~~---~G~~~~~~---~~~i~~~~~  219 (333)
T PRK10534        148 YLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSF--TICLSKGLGTP---VGSLLVGN---RDYIKRARR  219 (333)
T ss_pred             HHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEE--EEEeEcCCCCc---ccceEEcC---HHHHHHHHH
Confidence            9999999999999999999998 321   1211111 112 333  34899998754   67 67777   889998887


Q ss_pred             hhccCCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          258 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       258 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      ....+..+  .+.+.++++..+++.    ..+..+...+.++++.+.|+++|. .+..+. ++|++++++.  .+..++.
T Consensus       220 ~~~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~nfv~~~~~~--~~~~~~~  291 (333)
T PRK10534        220 WRKMTGGGMRQAGILAAAGLYALKH----NVARLQEDHDNAAWLAEQLREAGA-DVMRQD-TNMLFVRVGE--EQAAALG  291 (333)
T ss_pred             HHHHhCCchhhHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHhCCC-ccCCCC-ceEEEEECCc--hhHHHHH
Confidence            76543322  334556666666643    123344455567889999988865 666664 9999999873  1345665


Q ss_pred             HHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      + +++++||.++++.      ++|++.+. .+.+++++++++|.+++
T Consensus       292 ~-~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~  331 (333)
T PRK10534        292 E-YMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFL  331 (333)
T ss_pred             H-HHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence            5 5568999998863      58998764 68999999999998655

>PLN02721 threonine aldolase

Probab=100.00  E-value=2.8e-30  Score=240.16  Aligned_cols=327  Identities=19%  Similarity=0.248  Sum_probs=227.3

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      .+++|+.+.++. +++.+.+++.+.........|  ++...+++++++++++    .  +.+++++++++++..++.+++
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~----~--~~~~~~~~Gs~a~~~~l~~~~   76 (353)
T PLN02721          6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFG----K--EAALFVPSGTMGNLISVLVHC   76 (353)
T ss_pred             hhhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhC----C--ceeEEecCccHHHHHHHHHHc
Confidence            467899998886 688999998764222222333  3336889999999884    3  235666667778878888877


Q ss_pred             c-CCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-----CCCeEEEEeC-CCCCCccC
Q 015890          111 D-AGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVN-PGNPSGTY  180 (398)
Q Consensus       111 ~-~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~-p~nptG~~  180 (398)
                      + +||+|++++|+|.....   .+...|++++.+ +.+++ +.+|+|.+++.+++.     +.+++|++++ ++||+|.+
T Consensus        77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~  154 (353)
T PLN02721         77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTV-KNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRC  154 (353)
T ss_pred             cCCCCeEEEcCccceehhcccchhhhcCceeEec-CCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCcc
Confidence            7 99999999999865554   567789999988 76644 568999999999731     2358999976 57899999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQL  255 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l  255 (398)
                      ++.+++++|.++|+++|+++|+|++| +..   .+............++.|+||+++.   ++|+ ++.+   +++++.+
T Consensus       155 ~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~---~~~~~~~  228 (353)
T PLN02721        155 LSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGS---KSFIRKA  228 (353)
T ss_pred             ccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecC---HHHHHhH
Confidence            99999999999999999999999998 321   1221111111223445689999963   3465 5566   7888877


Q ss_pred             HHhhccCCCCcchHHHHHH--HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCC-CCCh
Q 015890          256 LKVQDNIPICASIISQHLA--LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK-HLDD  331 (398)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~  331 (398)
                      .........+.+...+.++  ...++   .+.++ .++..++++.+.+.|++++++.+ ..+..++++|++++.. ..+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (353)
T PLN02721        229 KRLRKTLGGGMRQVGVLAAAALVALQ---ENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA  304 (353)
T ss_pred             HHHHHhcCCCeehhHHHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence            6655433333332222222  22232   22332 33445667888899988765433 3333477889888642 1256


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+++++|. ++||.++++.    ++++|++++. .+++++++++++|++++..
T Consensus       305 ~~~~~~L~-~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        305 EKLCKSLE-EHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             HHHHHHHH-hCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence            77888885 8999999973    6799999985 7899999999999987654

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-30  Score=232.49  Aligned_cols=329  Identities=18%  Similarity=0.179  Sum_probs=247.8

Q ss_pred             CCcHHHHHHHHHhhcCC-----CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh--c----c
Q 015890           43 QPPKMAMEKVKELVWDP-----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL--C----D  111 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~-----~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l--~----~  111 (398)
                      ++.|+++++|...+...     +.+.|+.  ....+-+..++.+.+..|+++++|+||+|+|+++++++...  .    +
T Consensus        12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~--~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~   89 (386)
T COG1104          12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGR--EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQ   89 (386)
T ss_pred             CCCHHHHHHHHHHHHhhcCCccchhHhHH--HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhccc
Confidence            45899999998887652     1222221  11223333334444444899999999999999999999973  2    2


Q ss_pred             CCCEEEEeCCCCcChhhHHHhc---CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          112 AGDSVVMFAPYYFNSYMSFQMT---GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      .|..|+++.-.|+.....++.+   |+++.++ +++.+| .+|+|+|+++|++++  .+|.|.+.||.+|+++|   +++
T Consensus        90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl-~V~~~G-~v~~e~L~~al~~~T--~LVSim~aNnE~G~IQp---I~e  162 (386)
T COG1104          90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYL-PVDSNG-LVDLEQLEEALRPDT--ILVSIMHANNETGTIQP---IAE  162 (386)
T ss_pred             CCCeEEEcccccHHHHHHHHHHHhcCCeEEEe-CCCCCC-eEcHHHHHHhcCCCc--eEEEEEecccCeeeccc---HHH
Confidence            4689999999999888777666   9999999 888876 689999999999886  89999999999999999   999


Q ss_pred             HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcH--HHHHHHHHhhccCCCC
Q 015890          189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE--GFATQLLKVQDNIPIC  265 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~--~~~~~l~~~~~~~~~~  265 (398)
                      |.++|+++|+++++|.++ ++.-......  .+.++...|.||..|+.|  +|+++.+++.+  .++-.-.+.+.....+
T Consensus       163 i~~i~k~~~i~fHvDAvQa~Gkipi~~~~--~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGT  238 (386)
T COG1104         163 IGEICKERGILFHVDAVQAVGKIPIDLEE--LGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGT  238 (386)
T ss_pred             HHHHHHHcCCeEEEehhhhcCceeccccc--cCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCC
Confidence            999999999999999999 6653322222  234577889999999888  68877664211  1111112233345678


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC-CCCccccC---CccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                      .|.+.++++.++++...+.++....++...++++.+.|.+. +.+.+.+.   .-.+.+.+.++.  .+.+.+...| +.
T Consensus       239 env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g--v~gE~ll~~L-~~  315 (386)
T COG1104         239 ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG--VEGESLLLAL-DL  315 (386)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC--CcHHHHHHhc-cc
Confidence            89999999999998755667888889999999999999875 55344332   224566667764  3566666655 68


Q ss_pred             cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +||++..|+.|..                   .+.||||++. .+++|++.+++.|.++++.+++-
T Consensus       316 ~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~  381 (386)
T COG1104         316 AGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL  381 (386)
T ss_pred             cCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence            8999999999953                   2689999999 89999999999999999988754

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=100.00  E-value=3e-30  Score=243.57  Aligned_cols=328  Identities=16%  Similarity=0.075  Sum_probs=233.5

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      .+.|+.+.+.. +|+.+++++.+.+....   ...|....+..+..+.+.+.+.+.++.++++|++++|+++++..++.+
T Consensus        18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~   96 (397)
T TIGR01976        18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA   96 (397)
T ss_pred             eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence            67888776554 58899999988875421   123543334444555555556665677777899999999999888777


Q ss_pred             h---ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          109 L---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       109 l---~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      +   .++||+|+++.++|++..    ..++..|++++.+ +.+++++.+|++++++.+++++  ++|++++|+||||.+.
T Consensus        97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~  173 (397)
T TIGR01976        97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWA-RVDEATGELHPDDLASLLSPRT--RLVAVTAASNTLGSIV  173 (397)
T ss_pred             HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEE-eccccCCCcCHHHHHHhcCCCc--eEEEEeCCCCCCCccC
Confidence            5   578999999999997643    4457789999988 7765446789999999998765  9999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      +   +++|.++|+++|+++++|+++ .+...  ......+.+++++|++|++|   .++|+++++   +++++.+.....
T Consensus       174 ~---~~~i~~~~~~~~~~~ivD~a~~~~~~~--~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~---~~~~~~l~~~~~  242 (397)
T TIGR01976       174 D---LAAITELVHAAGALVVVDAVHYAPHGL--IDVQATGADFLTCSAYKFFG---PHMGILWGR---PELLMNLPPYKL  242 (397)
T ss_pred             C---HHHHHHHHHHcCCEEEEehhhhccccC--CCHHHcCCCEEEEechhhcC---CceEEEEEc---HHHHhhCCCccc
Confidence            9   999999999999999999999 43221  11222344577789999985   358999988   677766543321


Q ss_pred             c----------CCCCcchHHHHHHHHHhcC----Cc-----------hHHHHHHHHHHHHHHHHHHHhccCCCCccccC-
Q 015890          261 N----------IPICASIISQHLALYSLQT----GP-----------EWVTERVKDLVRNREIIREALSPLGEGAVKGG-  314 (398)
Q Consensus       261 ~----------~~~~~~~~~~~~~~~~l~~----~~-----------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-  314 (398)
                      .          ...+.+.....++..+++.    +.           ..+++..++..+.++++++.|++++.+++..+ 
T Consensus       243 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~  322 (397)
T TIGR01976       243 TFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVA  322 (397)
T ss_pred             cCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence            1          1123444444444444432    10           02456667777888899999988875566543 


Q ss_pred             ---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------CCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          315 ---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------CRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       315 ---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                         ..++++.+.++.  .+..++.++| .++||.++.+..|.           ..++||||++. .+++|++++++.|
T Consensus       323 ~~~~~~~~~~~~~~~--~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       323 RLAARVPTVSFTVHG--LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             CccCCCceEEEEeCC--cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence               135566666653  2466788877 58899999886653           24689999988 7889999888764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=100.00  E-value=4.6e-30  Score=237.27  Aligned_cols=314  Identities=20%  Similarity=0.172  Sum_probs=224.5

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      +++++||.+++++.+.....  ..|++.....++++.+++++    +  ++++++++|+++++..++.+++++||+|+++
T Consensus         6 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~   77 (338)
T cd06502           6 TVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             cCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence            56778999999998865432  35656665666666666665    5  5678888888899999999999999999999


Q ss_pred             CCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          120 APYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       120 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      .|+|.....   ..+..|++++.+ +.+.  +.+|++.+++++++.     .++++|++++|+|| |.+++.+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~  153 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPV-PGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA  153 (338)
T ss_pred             cCcceeeecCCcHHHHcCceEEee-cCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence            999976442   345689999888 6543  468999999999752     13599999999997 66679999999999


Q ss_pred             HHHHcCCEEEEeece-ec---cCCCccccccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhcc--CCC
Q 015890          192 LCKAAGSWLVVDNTY-FM---YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN--IPI  264 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~--~~~  264 (398)
                      +|+++|+++|+||+| ..   ..+........+..+++.|+||+++++|   |+ ++.+   +++++.+......  .++
T Consensus       154 ~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---g~~~~~~---~~~~~~~~~~~~~~~~~~  227 (338)
T cd06502         154 LAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV---GAVVVGN---RDFIARARRRRKQAGGGM  227 (338)
T ss_pred             HHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc---ceEEECC---HHHHHHHHHHHHHhCCCh
Confidence            999999999999998 22   1222111111223366889999998776   54 4566   7888887765432  233


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH--Hhc
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA--HRH  342 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~  342 (398)
                      +.+.+.+.++..+|+. ..+ .+..+++.++++++.+.|++++. .+..+. ++++.+.++........+.+++.  .++
T Consensus       228 ~~~~~~~~a~~~~L~~-~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~l~~~~~~  303 (338)
T cd06502         228 RQSGFLAAAGLAALEN-DLW-LRRLRHDHEMARRLAEALEELGG-LESEVQ-TNIVLLDPVEANAVFVELSKEAIERRGE  303 (338)
T ss_pred             hhHHHHHHHHHHHhcC-chH-HHHHHHHHHHHHHHHHHHHhcCC-Cccccc-CCeEEEecCCccHHHHHHHHHHHHhhhC
Confidence            4566777777777764 233 45557777788899999988876 555454 77777776532111122222222  157


Q ss_pred             CeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       343 gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      |+.+.+..    .++|||+++. .++++++++++++++
T Consensus       304 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         304 GVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             CEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            99997753    3889999987 689999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=100.00  E-value=8.7e-30  Score=236.52  Aligned_cols=328  Identities=20%  Similarity=0.185  Sum_probs=232.6

Q ss_pred             CeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           31 NAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        31 ~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+++|+.++ -..+.||++++++.+.+.+..  ...|....+..+..+.+.+.+.++++.+  +.++++++++++..++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~   79 (349)
T cd06454           2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE--AALVFSSGYAANDGVLS   79 (349)
T ss_pred             CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHH
Confidence            578888765 344557999999999987521  1122222344555556666666555653  34556667789998889


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC---CCCeEEEEeCCCCCCccCCCHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      +++++||+|+++.|+|+++...++..|++++.+ +.      +|.+.+++.+++.   .+++++++++++||||...+  
T Consensus        80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~--  150 (349)
T cd06454          80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIF-KH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP--  150 (349)
T ss_pred             HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEe-cC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC--
Confidence            999999999999999999888888899988877 42      3778888888742   23588888899999999988  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-eccCC---Cc---cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMYDG---RK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~~~---~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                       +++|+++|+++|+++|+|++| ++..+   ..   ......+.+++++|+||.++.+|   ||++.+   +++.+.+..
T Consensus       151 -~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---~~~~~~~~~  223 (349)
T cd06454         151 -LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---KELIDYLRS  223 (349)
T ss_pred             -HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---HHHHHHHHH
Confidence             899999999999999999999 43221   11   11122356788999999998655   899888   677776654


Q ss_pred             hhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          258 VQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       258 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      ....  ...+.+...++++.++++.... ..+..+++.++++.+.+.|.+.+. .+..+.++.+.++.++.. .+..++.
T Consensus       224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~  300 (349)
T cd06454         224 YARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKELGF-PVGGSPSHIIPPLIGDDP-AKAVAFS  300 (349)
T ss_pred             hchhhhccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCcEEEEeCCCh-HHHHHHH
Confidence            3322  2234566677777777765222 456677888889999998887764 444444344444444321 2467788


Q ss_pred             HHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +.|+ ++||.+.++....   ..+++|++++. .+++++++++++|+++
T Consensus       301 ~~L~-~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         301 DALL-ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             HHHH-hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            8876 6699998864321   24789999987 7899999999999763

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=2.6e-30  Score=243.71  Aligned_cols=338  Identities=16%  Similarity=0.094  Sum_probs=236.6

Q ss_pred             HcCCCeEEcCCc--cCCCCC-cHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHH
Q 015890           27 RGAKNAVSLAQG--VVYWQP-PKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~~-~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~  100 (398)
                      .+|++++||..|  .+.++. +|.+.+++.+++.+..  ...|...     ....+++++.+.++.+ ++++++++|+++
T Consensus        40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~-----~~~~la~~l~~~~~~~~~~~v~~~~sgse  114 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE-----PQIALAERLVELLGAPEGGRVFFCNSGAE  114 (398)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCH-----HHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence            368899999886  345555 7999999999887532  1234222     2245555565555543 478999999999


Q ss_pred             HHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC-CC--CCChHHHHHhhccCCCCeEEEEeCC
Q 015890          101 AFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK-TL--HPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       101 a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~-~~--~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      ++..+++.+...| ++|+..+++|+++...+... |.....  +.+.... ..  ..|++.+++.+.++  +++|+++++
T Consensus       115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~aviiep~  192 (398)
T PRK03244        115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDD--TAAVFLEPI  192 (398)
T ss_pred             HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCC--eEEEEEecc
Confidence            9999999877666 57888888998876544322 211110  0011000 00  13789999988643  599999999


Q ss_pred             CCCCccCCCHH-HHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          174 GNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       174 ~nptG~~~~~~-~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      +||+|.+++++ ++++|.++|++||+++|+||+|  +++.|........+....+.++||.++ +|+|+|+++.+   ++
T Consensus       193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~-~G~~ig~~~~~---~~  268 (398)
T PRK03244        193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLG-GGLPIGACLAF---GP  268 (398)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhh-CCcccEEEEEc---HH
Confidence            99999988655 5999999999999999999999  665553221111111111348899998 89999999999   77


Q ss_pred             HHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--CccccCCccEEEEeeCCCCC
Q 015890          251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLWARLPEKH  328 (398)
Q Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~  328 (398)
                      +++.+.......+++.+++.++++.++|+...  -.+..++.+++.+++.+.|++++.  +....+ .++++++.++.. 
T Consensus       269 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~~~i~~~~~-  344 (398)
T PRK03244        269 AADLLTPGLHGSTFGGNPVACAAALAVLDTIA--SEGLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLLLGIVLTAP-  344 (398)
T ss_pred             HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEEEEEEEecc-
Confidence            88877654455677889999999999987411  123445666667778888876532  122223 488899998642 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       ....+.+++. ++||.+.+.    .++.||++++. .+++|+++++++|.++++++.
T Consensus       345 -~~~~~~~~l~-~~Gv~~~~~----~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        345 -VAKAVEAAAR-EAGFLVNAV----APDVIRLAPPLIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             -HHHHHHHHHH-HCCeEEeec----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence             3566777775 789999874    25789999887 789999999999999997643

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.98  E-value=1.2e-29  Score=239.89  Aligned_cols=338  Identities=19%  Similarity=0.158  Sum_probs=236.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .++.++|..+.+..  +|.+++++.+.+...      +...|....+..++++..++.+++.++.+..+|+++ |+++++
T Consensus        18 ~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-sgt~a~   94 (402)
T cd00378          18 QRETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-SGSQAN   94 (402)
T ss_pred             HHhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-CcHHHH
Confidence            36688888776664  799999998765321      122344455567777777777878888876556555 467999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhH-----HHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMS-----FQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      ..++.+++++||+|+++.|+|.++...     ++..|.++..+ +.+.+  ++.+|++.+++.+.... ++++++++++|
T Consensus        95 ~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~id~~~l~~~i~~~~-~~~v~~~~~~~  172 (402)
T cd00378          95 LAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESV-PYGVDPETGLIDYDALEKMALEFK-PKLIVAGASAY  172 (402)
T ss_pred             HHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEe-cCCcCcccCCcCHHHHHHHHHhCC-CCEEEecCccc
Confidence            999999999999999999999766433     56678776666 55433  57899999999996332 58999888877


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      |  ...+   +++|+++|+++|+++|+|++| .+  +.+....... ...++++|+||++  +|+|+||++.++  ++++
T Consensus       173 ~--~~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l--~G~~gg~i~~~~--~~~~  242 (402)
T cd00378         173 P--RPID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL--RGPRGGLILTRK--GELA  242 (402)
T ss_pred             C--CCcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCC--CCCCceEEEecc--HHHH
Confidence            5  4556   899999999999999999997 32  3332122122 2347899999987  688899999884  4788


Q ss_pred             HHHHHhhccCCCC-cchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCC
Q 015890          253 TQLLKVQDNIPIC-ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHL  329 (398)
Q Consensus       253 ~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~  329 (398)
                      +.+.........+ .+...+.++..++.... ....+..+++.++++++.+.|++.+. .+. .+.+++++|+.++....
T Consensus       243 ~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~v~v~~~~~~~  321 (402)
T cd00378         243 KKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGF-KVVSGGTDNHLVLVDLRPKGI  321 (402)
T ss_pred             HHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC-eEeecCCCCeEEEEeCCccCC
Confidence            8876654322222 23334444344443212 25667778889999999999988765 444 45668999999974333


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCC------CCCeEEEEecCC-----CHHHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGGL-----VEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~~~-----~~~~~~~~~~~l~~~~~~  383 (398)
                      +...+.+ +++++||.+.+.....      .+.++|++++..     +++|++.+++.|.+++++
T Consensus       322 ~~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~  385 (402)
T cd00378         322 TGKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD  385 (402)
T ss_pred             CHHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence            4445555 5578999998643221      346899997662     478888888888876654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.98  E-value=6.2e-30  Score=241.82  Aligned_cols=330  Identities=15%  Similarity=0.094  Sum_probs=231.6

Q ss_pred             CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      |++.++|+.++ .+++.+|.+++++.+++.....      ..|+......++++.+++++    |. ++.+++++| +++
T Consensus        45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~sG-~~a  118 (410)
T PRK13392         45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTSG-YVS  118 (410)
T ss_pred             CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECcH-HHH
Confidence            46688888865 6777899999999988765321      11222223456666666665    53 455665555 688


Q ss_pred             HHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCC
Q 015890          102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPS  177 (398)
Q Consensus       102 ~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~npt  177 (398)
                      +..++..+..  +|+.|+++...|..+...++..|.++..+ +.+      |.+.+++.++.  ...+++|++++|+|||
T Consensus       119 ~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~-~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~t  191 (410)
T PRK13392        119 NDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVF-RHN------DLADLEEQLASVDPDRPKLIAFESVYSMD  191 (410)
T ss_pred             HHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence            8888887753  78888888778877777788889887666 321      45556665541  1235899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc-C--CCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY-D--GRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~-~--~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      |.+.+   +++|.++|+++|+++|+||+| ++. .  +....   ......+++++|+||+||++|   ||++++   ++
T Consensus       192 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~---~~  262 (410)
T PRK13392        192 GDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS---AD  262 (410)
T ss_pred             ccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC---HH
Confidence            99999   899999999999999999999 333 2  21111   011122478899999998877   899887   78


Q ss_pred             HHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890          251 FATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  328 (398)
Q Consensus       251 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  328 (398)
                      +++.+......+  +.+.+++.++++.++|+.. .......+.+.++++++.+.|++.+. .+..+. ++++.+.++.. 
T Consensus       263 ~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~~-  338 (410)
T PRK13392        263 LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-KTSQTERDAHQDRVAALKAKLNANGI-PVMPSP-SHIVPVMVGDP-  338 (410)
T ss_pred             HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence            888777665432  3345567788888888752 22234556778888999999988765 555555 55555555421 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+..++.++|++++||.++++....   ...++|++++. .+++|+++++++|.++++++
T Consensus       339 ~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        339 TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence            1345788888767899999875432   23689999976 68999999999999887764

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.98  E-value=1e-29  Score=236.82  Aligned_cols=317  Identities=17%  Similarity=0.199  Sum_probs=219.4

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCC---CC----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEE
Q 015890           44 PPKMAMEKVKELVWDPSISKYG---AD----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~---~~----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      ......+++.+.-.......+.   ..    +...++++.+++++    |.+  .+.+++|+++++..++.++.++||+|
T Consensus        20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~V   93 (370)
T TIGR02539        20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWV   93 (370)
T ss_pred             CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEE
Confidence            5677777777764321111110   11    12344555565555    654  56678999999999999999999999


Q ss_pred             EEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          117 VMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       117 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      +++.++|++....++..|++++.+ +.+. .++.+|+++|++.++..     ..+++|++++|+||+|...+   +++|.
T Consensus        94 l~~~~~h~s~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~  169 (370)
T TIGR02539        94 VLDGLAHYTSYVAAERAGLNVKEV-PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVA  169 (370)
T ss_pred             EECCcccHHHHHHHHHcCCEEEEE-ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHH
Confidence            999999877777889999999988 6543 34678999999998631     13689999999999999999   88999


Q ss_pred             HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC-----
Q 015890          191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI-----  264 (398)
Q Consensus       191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~-----  264 (398)
                      ++|+++|+++|+|++| ++..+.  .....+..++++|+||+++ +|.|+||++++   +++++.+......+..     
T Consensus       170 ~la~~~~~~livDea~~~g~~~~--~~~~~~~di~v~s~sK~~~-~~g~~G~l~~~---~~~i~~l~~~~~~~~~~~~~~  243 (370)
T TIGR02539       170 KVCREKGVPLLLNCAYTVGRMPV--SAKEIGADFIVGSGHKSMA-ASGPCGVLGMS---EEWEDIVLRKSRYSPVKEVEL  243 (370)
T ss_pred             HHHHHcCCeEEEECccccCCcCC--CHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhhcccccCCccceeee
Confidence            9999999999999999 542121  1112234577899999998 56689999998   7888887665432221     


Q ss_pred             ---CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc--ccCCccEEEEeeCCCCC-------CChH
Q 015890          265 ---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEKH-------LDDF  332 (398)
Q Consensus       265 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~  332 (398)
                         +.....+.++.++++...+++.+..+.+ ++++++++.|++++. .+  ..+..++|++++++...       .+..
T Consensus       244 ~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~-~~~~~l~~~L~~~g~-~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~  321 (370)
T TIGR02539       244 LGCTSRGAPIVTMMASFPHVVERVKRWDEEV-KKTRWFVAELEDIGF-IQLGQKPKEHDLVKFETPGFHEIAQKHKRRGY  321 (370)
T ss_pred             ecccccccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCc-EEEccCCCcCceEEEECCchhHHhhhhccccH
Confidence               1112244444555543223344333333 335689999998875 43  23445888888876310       1233


Q ss_pred             HHHHHHHHhcCeE-EecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       333 ~~~~~ll~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+.+.| .++||. ++++    .++++|+++...+.+++++++++|++.+++
T Consensus       322 ~~~~~L-~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~  368 (370)
T TIGR02539       322 FLYEEL-KKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE  368 (370)
T ss_pred             HHHHHH-HhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence            466666 588997 6543    367999997345899999999999988765

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.98  E-value=1.5e-29  Score=237.75  Aligned_cols=327  Identities=17%  Similarity=0.104  Sum_probs=249.3

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      .|...++++++++.+.+     ..| .+.+..++++.+++.++++++.+. +.+++++++|++++.++..+.++||+|++
T Consensus        16 GP~~~~~~V~~a~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv   89 (401)
T PLN02409         16 GPVNIPERVLRAMNRPN-----EDH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVS   89 (401)
T ss_pred             CCCCCCHHHHHHhcCCC-----CCC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEE
Confidence            35567889998886643     223 356778899999999999888865 56888999999999999999999999999


Q ss_pred             eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHHHHHHHHHH--
Q 015890          119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPERLLKRISDL--  192 (398)
Q Consensus       119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~l--  192 (398)
                      +.++|++.  ...++..|++++.+ +.+.++ .+|++.+++.+++.  +++++|++++++||||.++|   +++|.++  
T Consensus        90 ~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~-~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---~~~i~~l~~  164 (401)
T PLN02409         90 FRIGQFSLLWIDQMQRLNFDVDVV-ESPWGQ-GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---LAGVRKLLD  164 (401)
T ss_pred             eCCCchhHHHHHHHHHcCCceEEE-ECCCCC-CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC---HHHHHHHHh
Confidence            99999765  46778889999988 766433 47999999999862  13699999999999999999   5555555  


Q ss_pred             HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh------------
Q 015890          193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------------  259 (398)
Q Consensus       193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~------------  259 (398)
                      |+++|+++|+|+++ ++.  .+......+.++++.|.+|+++.| .++||++.+   +++++++....            
T Consensus       165 ~~~~g~~~vvD~v~s~g~--~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~  238 (401)
T PLN02409        165 CAQHPALLLVDGVSSIGA--LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCAS---PKALEASKTAKSPRVFFDWADYL  238 (401)
T ss_pred             hhccCcEEEEEcccccCC--ccccccccCccEEEEcCccccCcC-CCcceeEEC---HHHHHHHhcCCCCCeecCHHHHH
Confidence            99999999999999 543  222222234457788889999633 368999998   67777664321            


Q ss_pred             ------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCCCCC
Q 015890          260 ------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKH  328 (398)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~  328 (398)
                            ....++++.+.+.++.++++.. ...+++..++++++++++++.|+..+. ++..+.    .....++.++++ 
T Consensus       239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~-~~~~~~~~~~s~~v~~~~~p~~-  316 (401)
T PLN02409        239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL-KLCTKKPEWRSDTVTAVVVPEG-  316 (401)
T ss_pred             HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcccceEEEeCCCC-
Confidence                  0114477778888888888752 234677888899999999999987765 544332    123456677654 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .+..++...+++++||.+.+|......+.|||+... .+.+++..++.+|.+++.++.
T Consensus       317 ~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g  374 (401)
T PLN02409        317 IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG  374 (401)
T ss_pred             CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            366788888888999999998765457899999887 899999999999999998865

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.98  E-value=4.2e-30  Score=244.02  Aligned_cols=340  Identities=17%  Similarity=0.170  Sum_probs=237.5

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|  ...++ .+|.+.+++.+++...  ..|....+..+....+++.+.+.++.+.+++++++|+++|+.
T Consensus        33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~  110 (413)
T cd00610          33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE  110 (413)
T ss_pred             CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence            478999999987  44555 7899999999998652  344333345667777777777777777889999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCC-----CCCCChHHHHHhhccC-
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSK-----TLHPDADWLEKTLETK-  162 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~-----~~~~d~e~l~~~l~~~-  162 (398)
                      .+++.+.  .++++|++.+++|+++.......+             .+++.+ +.++.     .+..|++.|++.++.. 
T Consensus       111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~  189 (413)
T cd00610         111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHV-PYPYRYRPPAELADDLEALEEALEEHP  189 (413)
T ss_pred             HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEe-CCCccccchhhHHHHHHHHHHHHhcCC
Confidence            9999874  567999999999999765443322             123444 33311     1334889999998752 


Q ss_pred             CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee
Q 015890          163 PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV  239 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  239 (398)
                      ..+++++++..++++|.++ +.+++++|.++|++||+++|+||+|  ++..+........+....+.|+||.++ +|+|+
T Consensus       190 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~  268 (413)
T cd00610         190 EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPL  268 (413)
T ss_pred             CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEccccc-Ccccc
Confidence            2256777776678889865 6778999999999999999999999  544443211111111223458899998 58999


Q ss_pred             EEEEccCCcHHHHHHH--HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890          240 GYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG  313 (398)
Q Consensus       240 G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~  313 (398)
                      ||++++   +++++.+  .......+++.++..++++.++++....  .+..++++++.+++.+.|+..    +.+....
T Consensus       269 g~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  343 (413)
T cd00610         269 GAVLGR---EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVR  343 (413)
T ss_pred             EEEEEc---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEee
Confidence            999988   7888875  3333445677788888888888764211  234455566666666655543    2211122


Q ss_pred             CCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +. +.++++.++...       .....+.+.|. ++||.+.|+.    .+.+|++++. .+++++++++++|.+++
T Consensus       344 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l  413 (413)
T cd00610         344 GR-GLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             cC-ceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            33 677888775431       23456777665 8899999974    6789999887 68999999999998753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.98  E-value=2.1e-29  Score=236.29  Aligned_cols=333  Identities=16%  Similarity=0.183  Sum_probs=240.1

Q ss_pred             cCCccCCCCCcHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHHHHHH
Q 015890           35 LAQGVVYWQPPKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        35 l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      |+.+... ++++.+++++.+.+.+..     .+.| +......++++++++.... +. ++++|++|+|++++++.++.+
T Consensus         3 ld~aa~~-~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~-~~~~~~~i~~t~g~teal~~~~~~   79 (382)
T TIGR03403         3 LDNNATT-MLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGI-NARDLDDIIITSCATESNNWVLKG   79 (382)
T ss_pred             ccCcCCC-CCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHc-CcCCCCeEEEeCCHHHHHHHHHHH
Confidence            4444333 357889999988775421     1122 2234566777777766433 44 678999999999999999987


Q ss_pred             hc-----cC-CCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          109 LC-----DA-GDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       109 l~-----~~-gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      +.     ++ +++|+++...|+++..   .++..|++++.+ +.+++ +.+|++.+++.+++++  +++++++|+||||.
T Consensus        80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v-~~~~~-g~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~  155 (382)
T TIGR03403        80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL-PINEQ-GTITAEQVREAITEKT--ALVSVMWANNETGM  155 (382)
T ss_pred             HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE-ecCCC-CCCCHHHHHHhcccCC--eEEEEEcccCCCcc
Confidence            62     45 4689999877766543   356689999999 87755 4689999999998765  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH---
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---  255 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l---  255 (398)
                      ++|   +++|.++|+++|+++++|+++ ++....  .....+.++++.|.+|++|++|  +|+++.++.. .+...+   
T Consensus       156 ~~~---~~~I~~la~~~g~~~ivD~a~~~g~~~~--~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~p~~~g~  227 (382)
T TIGR03403       156 IFP---IKEIGEICKERGVLFHTDAVQAIGKIPV--DVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELTPLFHGG  227 (382)
T ss_pred             ccC---HHHHHHHHHHcCCEEEEechhhcCCCcc--CccccCCCEEEEcchhhCCCCc--eEEEEECCCC-CCCCcccCC
Confidence            999   889999999999999999998 543222  2222334488899999988777  4777766421 110001   


Q ss_pred             HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChH
Q 015890          256 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDF  332 (398)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  332 (398)
                      ........++++.+.+.++..+++...++++...++++++++++.+.|++++++.+..+..   ++++.+.++.  .+..
T Consensus       228 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  305 (382)
T TIGR03403       228 EHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG--VEGE  305 (382)
T ss_pred             CCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC--CCHH
Confidence            0011123567888888888888875345567777888999999999998887767765431   3455566642  3567


Q ss_pred             HHHHHHHHhcCeEEecCCCCC-------------------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          333 EVVRWLAHRHGVVVIPGGACG-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ++...| .++||.++.|+.|.                   ..+.||+|++. .+++|++++++.|+++++++.
T Consensus       306 ~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       306 AMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             HHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            777775 58899999887662                   12579999999 899999999999999888754

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=2.5e-29  Score=235.92  Aligned_cols=327  Identities=16%  Similarity=0.188  Sum_probs=230.5

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      .+|+.++||..|  .++++ .+|.+.+++.+++.+...  ..| +    .+....+++.+.+.++.  +++++++|++++
T Consensus        24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~----~~~~~~l~~~la~~~g~--~~~~~~~sg~~a   96 (379)
T TIGR00707        24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLY-Y----TEPQEELAEKLVEHSGA--DRVFFCNSGAEA   96 (379)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccccc-C----CHHHHHHHHHHHhhCCC--CEEEEeCCcHHH
Confidence            468899999986  34554 459999999998875321  122 2    34555666666666664  489999999999


Q ss_pred             HHHHHHHhc---c----CCCEEEEeCCCCcChhhHHHhcCcEEEE----eccCCCC-CCC--CChHHHHHhhccCCCCeE
Q 015890          102 FVNIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMTGVTHIL----VGPCSSK-TLH--PDADWLEKTLETKPTPKL  167 (398)
Q Consensus       102 ~~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~-~~~--~d~e~l~~~l~~~~~~~~  167 (398)
                      +..+++.+.   .    ++|+|+++.|+|+++...+...+.....    . +...+ .+.  .|++.+++.++++  +++
T Consensus        97 ~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~--~~~  173 (379)
T TIGR00707        97 NEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFE-PLVPGFSYAPYNDIESLKKAIDDE--TAA  173 (379)
T ss_pred             HHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCC-CCCCCceeeCCCCHHHHHHHhhhC--eeE
Confidence            999998663   2    3799999999999888766655543321    1 22111 111  1899999998765  489


Q ss_pred             EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc-CCcEEEEcccccccCCCcceeEE
Q 015890          168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGY  241 (398)
Q Consensus       168 v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~-~~~~i~~~s~sK~~~~~G~r~G~  241 (398)
                      |++++++|++|.. ++.+++++|.++|+++|+++|+||+|  +.+.+....  ... .++ +  .++||.++ +|+|+||
T Consensus       174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d-~--~t~sK~~~-~G~riG~  249 (379)
T TIGR00707       174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPD-I--ITLAKGLG-GGVPIGA  249 (379)
T ss_pred             EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCC-E--EEEccccc-CCcccEE
Confidence            9998777778864 68999999999999999999999999  655443211  111 122 2  37899999 9999999


Q ss_pred             EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC---CccccCCccE
Q 015890          242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAI  318 (398)
Q Consensus       242 i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~  318 (398)
                      ++.+   +++++.+........++.+++.++++.++|+...  ..+..++++++++.+++.|++.+.   .....+ .++
T Consensus       250 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~  323 (379)
T TIGR00707       250 TLAK---EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--KERLLENVKEKGDYFKERLEELGKNYPNKEVRG-KGL  323 (379)
T ss_pred             EEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcccc-Cce
Confidence            9998   7888888765445567788999999998887421  123445555566666655544321   111223 478


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ++++.++.   +..++.+.| .++||.+.|+.    .+++|++++. .+++++++++++|++++
T Consensus       324 ~~~~~~~~---~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       324 MLGIELEA---PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             EEEEEecC---cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            88888864   356777776 58999999853    5789999876 78999999999998753

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=8.3e-29  Score=230.40  Aligned_cols=320  Identities=17%  Similarity=0.154  Sum_probs=222.1

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCC
Q 015890           41 YWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAG  113 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~g  113 (398)
                      +-+..+++++++.+........   ....    .+...++++.+++++    |+  +++++++|+++++..++.+++++|
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~g   83 (361)
T cd06452          10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEKG   83 (361)
T ss_pred             CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCCC
Confidence            3456789999998877432111   1111    133456666666665    65  789999999999999999999999


Q ss_pred             CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       114 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      |+|+++.++|++....++..|++++.+ +.+.+ .+.+|++.+++.+++.     ..+++|++++|+||||...+   ++
T Consensus        84 d~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~  159 (361)
T cd06452          84 DWVVVDGLAHYTSYVAAERAGLNVREV-PNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AK  159 (361)
T ss_pred             CEEEEcCCcchHHHHHHHhcCCEEEEE-ecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HH
Confidence            999999999988877889999999999 77654 3678999999988631     23699999999999999888   89


Q ss_pred             HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----
Q 015890          188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----  262 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~----  262 (398)
                      +|.++|+++|+++|+|++| ++...  ......+.+++++|+||+++ ++.|+||++++   +++++.+......+    
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~~~--~~~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~---~~~~~~l~~~~~~~~~~~  233 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGRMP--VSGKELGADFIVGSGHKSMA-ASAPIGVLATT---EEWADIVFRTSQMFKIKE  233 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCCcC--CCHHHcCCCEEEecCCcccc-CCCCeEEEEEC---HHHHHHHhccccccccce
Confidence            9999999999999999999 43211  22222345689999999997 55699999998   78888876544321    


Q ss_pred             ----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEEeeCCCC-------CC
Q 015890          263 ----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEK-------HL  329 (398)
Q Consensus       263 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-------~~  329 (398)
                          ..+.+...+.++.++++...+.+++ ..+..++++++++.|+++++++++.  +...+++.++.+..       ..
T Consensus       234 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~  312 (361)
T cd06452         234 VELLGCTLRGAPLVTLMASFPHVKERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKR  312 (361)
T ss_pred             eeeeccccCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccc
Confidence                1111122233333444321222322 3333445578899999885556652  23356776666521       11


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ...++.++|+ ++||.+..   .+..+++|++....++++++.++++|+++.
T Consensus       313 ~~~~~~~~L~-~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         313 RGYFLYSELK-KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             cchhHHHHHH-HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            2336788775 78998532   234568999984357899999999887543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK07179 hypothetical protein; Provisional

Probab=99.97  E-value=1.1e-28  Score=232.97  Aligned_cols=328  Identities=19%  Similarity=0.176  Sum_probs=230.6

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-----CCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-----ISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-----~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      .|..+++|+.++ -++..+|++++++.+++.+..     ...|. ......++++.+++++    +.  +.+++++|+++
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~  125 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA  125 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence            456688888765 455578999999999886421     11111 1123455666666665    54  45688999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      |+..+++++..+||.|++..++|......++..|.+++.+ +      ..|++++++.+++.+ +++|++++++||||.+
T Consensus       126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~-~~lV~v~~v~n~tG~i  197 (407)
T PRK07179        126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPF-R------HNDVDHLRRQIERHG-PGIIVVDSVYSTTGTI  197 (407)
T ss_pred             HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEe-c------CCCHHHHHHHHHhcC-CeEEEECCCCCCCCcc
Confidence            9999999999999999999999988888888888887665 2      248999999997643 4889999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Cccc-cc--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKHC-CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      +|   +++|.++|+++|+++|+||+| ++..+   .... ..  ....++++.|+||++|.   |+|+++++   +++++
T Consensus       198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~---~~~~~  268 (407)
T PRK07179        198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG---RAGIITCP---RELAE  268 (407)
T ss_pred             cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc---cCeEEEeC---HHHHH
Confidence            99   889999999999999999999 54322   1111 11  11225888999999962   58999988   67777


Q ss_pred             HHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          254 QLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       254 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      .+.....  ....+.++...+++.++++.. ....+..++++++++++.+.|++++. .+. +. ++++++.++.. .+.
T Consensus       269 ~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~-~~i~~l~~~~~-~~~  343 (407)
T PRK07179        269 YVPFVSYPAIFSSTLLPHEIAGLEATLEVI-ESADDRRARLHANARFLREGLSELGY-NIR-SE-SQIIALETGSE-RNT  343 (407)
T ss_pred             HHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CC-CCEEEEEeCCH-HHH
Confidence            6654332  123344445445555555531 22345667888889999999988754 554 33 56777776432 123


Q ss_pred             HHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..+...| .++||.+.......   ..+.+||+++. .+++|+++++++|.+++.+.
T Consensus       344 ~~~~~~L-~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        344 EVLRDAL-EERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             HHHHHHH-HHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            4555555 58899854221111   24789999998 79999999999999888764

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.97  E-value=9e-29  Score=233.41  Aligned_cols=331  Identities=17%  Similarity=0.133  Sum_probs=230.6

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+++++|+.++ -++..+|++++++.+++.+....      .|+..+...++++.+++++    +.  +..++++++++
T Consensus        43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~----g~--~~~l~~~sG~~  116 (402)
T TIGR01821        43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH----GK--ESALVFTSGYV  116 (402)
T ss_pred             CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh----CC--CeEEEECchHH
Confidence            347789998876 56678999999999988663211      1112222345555555554    53  34566666789


Q ss_pred             HHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCC
Q 015890          101 AFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~np  176 (398)
                      ++..++..+..  +++.|+.....|......++..|.++..+ +.      .|.+++++.++..  ..+++|++++|+||
T Consensus       117 an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~  189 (402)
T TIGR01821       117 ANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIF-RH------NDVAHLEKLLQSVDPNRPKIIAFESVYSM  189 (402)
T ss_pred             HHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCC
Confidence            99999988865  66666666556666666677778776655 32      2677788877621  12589999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Ccccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      +|.+.|   +++|.++|+++|+++|+||+| ++.-+   .....   ...+.+++++|+||++|.+|   ||++++   +
T Consensus       190 ~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~---~  260 (402)
T TIGR01821       190 DGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS---R  260 (402)
T ss_pred             CCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC---H
Confidence            999999   899999999999999999999 44322   11110   11224688899999998777   899888   7


Q ss_pred             HHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      ++++.+......  ++.+.++..++++.++|+..... ....+...++++++.+.|++++. .+..+. ++++.+.++..
T Consensus       261 ~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~i~~~~~  337 (402)
T TIGR01821       261 KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEALGI-PVIPNP-SHIVPVIIGDA  337 (402)
T ss_pred             HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH
Confidence            888887654432  23456777788888888752222 34445566788888998888765 555555 55666655421


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                       ....++.++|++++||.+++...+.   ...++||+++. .+++|+++++++|+++++++
T Consensus       338 -~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       338 -ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             -HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence             1345777877766799998865432   23689999987 79999999999999988764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PLN02483 serine palmitoyltransferase

Probab=99.97  E-value=1.1e-28  Score=235.79  Aligned_cols=334  Identities=16%  Similarity=0.162  Sum_probs=232.4

Q ss_pred             CCCeEEcCCcc-CCC-----CCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           29 AKNAVSLAQGV-VYW-----QPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        29 g~~~~~l~~g~-~~~-----~~~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +++.+||+..+ -++     .+++.+.+++.+.-..  .....|+......++++.++++++     .++.+++++ +..
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-----~~~ai~~~~-G~~  172 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-----KPAAIVFGM-GYA  172 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-----CCcEEEECC-HHH
Confidence            46678887654 222     2345666666654322  112336667778888888888884     245566655 457


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-------C---CCCeEEEE
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-------K---PTPKLVSV  170 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-------~---~~~~~v~i  170 (398)
                      ++..++.+++++||.|++++++|.++...++..|++++.+ +.+      |++++++.++.       +   +..+++++
T Consensus       173 an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~-~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~liv  245 (489)
T PLN02483        173 TNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVF-QHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVI  245 (489)
T ss_pred             HHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhhhhccccccccCCceEEEE
Confidence            7778888999999999999999999999999999999888 532      45566655531       1   11254554


Q ss_pred             e-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCC---Ccc----ccccCCcEEEEcccccccCCCcceeEE
Q 015890          171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDG---RKH----CCVEGDHVVNLFSFSKAYGMMGWRVGY  241 (398)
Q Consensus       171 ~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~---~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~  241 (398)
                      + ...|++|.+.+   +++|+++|+++|+++|+||+| ++..+   ...    .....+.+++++|+||++|+.|   ||
T Consensus       246 ve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~  319 (489)
T PLN02483        246 VEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GY  319 (489)
T ss_pred             ECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eE
Confidence            4 55699999998   999999999999999999999 44322   111    1112356799999999998776   99


Q ss_pred             EEccCCcHHHHHHHHHhhccC--CCCcchHHHHHHHHHhc-----CCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          242 IAYPSEVEGFATQLLKVQDNI--PICASIISQHLALYSLQ-----TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       242 i~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      ++++   +++++.+.......  ..+.+++...++.++|+     .+.+...++.+.++++++.+++.|++++. .+..+
T Consensus       320 i~~~---~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~-~v~~~  395 (489)
T PLN02483        320 IAGS---KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF-EVLGD  395 (489)
T ss_pred             EEcC---HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC-cccCC
Confidence            9988   88999887654321  22334444444455553     12234556678899999999999998865 56555


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .++..+++.+... .+..++..+|+ ++||.+.+..++.   ..+.+|++++. .+++++++++++|.++++.+.-.
T Consensus       396 ~~sp~~~l~l~~~-~~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~  470 (489)
T PLN02483        396 NDSPVMPIMLYNP-AKIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGIK  470 (489)
T ss_pred             CCCCEEEEEECCH-HHHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCce
Confidence            5455666554322 13457888876 6899999743322   23689999987 79999999999999998876543

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.97  E-value=1.6e-28  Score=228.82  Aligned_cols=319  Identities=14%  Similarity=0.118  Sum_probs=232.7

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      |...++.+.+++.+..     ..+  .....+..+.+.+.++++++.++  ++|++++|+|++++.++.++..+||++++
T Consensus        11 p~~~~~~v~~~~~~~~-----~~~--~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv   83 (363)
T TIGR02326        11 PLTTSRTVKEAMLFDW-----CTW--DSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLV   83 (363)
T ss_pred             CCCCCHHHHHHhCCCC-----CCC--ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEE
Confidence            4445677777665433     112  23455566666677777778865  36999999999999999999988998888


Q ss_pred             eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      ..+++++.  ...++..|.+++.+ +.+++ ..+|++.+++.++.++.++++++.+++||||+.+|   +++|+++|+++
T Consensus        84 ~~~~~~~~~~~~~a~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~  158 (363)
T TIGR02326        84 VINGAYGARIVQIAEYLGIPHHVV-DTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH  158 (363)
T ss_pred             EeCChhhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc
Confidence            77777665  36678899999988 77644 46799999999986554678888999999999999   89999999999


Q ss_pred             CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHh----------------
Q 015890          197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKV----------------  258 (398)
Q Consensus       197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~----------------  258 (398)
                      |+++|+|+++ ++...  ......+.+++++|++|+++ ++|  +|+++++   ++.++.+...                
T Consensus       159 g~~livD~~~~~g~~~--~~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (363)
T TIGR02326       159 GKVTIVDAMSSFGGIP--IDIAELHIDYLISSANKCIQGVPG--FGFVIAR---QAELAACKGNARSLSLDLYDQWRCME  231 (363)
T ss_pred             CCEEEEEccccccCcc--cchhhcCccEEEecCccccccCCc--ceEEEEC---HHHHHHhhcCCCceeecHHHHHHHHh
Confidence            9999999888 54322  22333345588899999884 345  6999998   5666554210                


Q ss_pred             --hccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCC-CC
Q 015890          259 --QDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LD  330 (398)
Q Consensus       259 --~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-~~  330 (398)
                        .....++.+.+.+.++.++++.. . ..+++..+++.++++++++.|++++. .+..+   ..+...++.++... .+
T Consensus       232 ~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~  310 (363)
T TIGR02326       232 DNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGF-EPLLDDEIQSPIITSFYSPEDPDYR  310 (363)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCceEEEEECCCCCCCC
Confidence              01123567888888877777652 2 23567778899999999999988765 34322   23445667776431 24


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-CCCHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~l~~~~  381 (398)
                      ..++.+.| +++||.+.+|..+ ..++|||++. ..+.+++++++++|++++
T Consensus       311 ~~~v~~~L-~~~gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       311 FADFYQRL-KEQGFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             HHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            56777766 5889999998765 3578999964 478999999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.97  E-value=1.2e-28  Score=232.92  Aligned_cols=328  Identities=16%  Similarity=0.136  Sum_probs=230.5

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH-HHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ-AFV  103 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~-a~~  103 (398)
                      .+.++++.|.+++++|+.+.+++.+.  . ....|.+     ..|..+++++++++++++++.+.++++++++++. ++.
T Consensus        20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~   96 (398)
T cd00613          20 QSMSFLGSGTYKHNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA   96 (398)
T ss_pred             cCcccccccccCCcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence            44589999999998777777766665  2 1234554     6788999999999999999887767777775554 444


Q ss_pred             HHHHHhccC--CCEEEEeCCCCcChhhHHHhcC----cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          104 NIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTG----VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       104 ~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      .+..++..+  ||+|+++.+.|+.+...++..|    .+++.+ +.+++ +.+|++.+++.+.+++  ++|++++|+ |+
T Consensus        97 ~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~t--~~viv~~~~-~~  171 (398)
T cd00613          97 AGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV-PSDEG-GTVDLEALKEEVSEEV--AALMVQYPN-TL  171 (398)
T ss_pred             HHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe-ccCCC-CCcCHHHHHHhcCCCe--EEEEEECCC-CC
Confidence            555555565  9999999999999888887777    888888 76543 4689999999998664  999999885 89


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC----cceeEEEEccCCcHHHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~i~~~~~~~~~~  252 (398)
                      |.+.+  .+++|+++|+++|+++|+|+++ .......  ....+.+++++|++|++ .|    |+++|+++.+   ++++
T Consensus       172 G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~~~~--~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~---~~~~  243 (398)
T cd00613         172 GVFED--LIKEIADIAHSAGALVYVDGDNLNLTGLKP--PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK---KELV  243 (398)
T ss_pred             ceecc--hHHHHHHHHHhcCCEEEEEeccccccCCCC--hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh---hhhH
Confidence            99854  4699999999999999999988 3321111  11224568899999998 44    7889999998   5666


Q ss_pred             HHHHHh-----------------------------hccCCCCcchHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHH
Q 015890          253 TQLLKV-----------------------------QDNIPICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       253 ~~l~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      +.+...                             .....++.+.....++...+. .....+++..++++++++++.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~  323 (398)
T cd00613         244 RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKR  323 (398)
T ss_pred             hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            553110                             000112222233333333333 23456778889999999999999


Q ss_pred             hccCCCCccccCCccE--EEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          303 LSPLGEGAVKGGEGAI--YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                      |++++....  +.+..  .+++.++.. ..+..+++..|+ ++||.+.... ....+.+|++++. .+++|++++++.|
T Consensus       324 L~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         324 LKEVGGVLP--FNGPFFHEFVLRLPPLYGIRAEDLAKALI-DGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             HHhcCCccc--CCCCeeEEEEEEcCCcchHHHHHHHHhhh-hcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence            998776332  22222  246666531 124667888775 7899875421 2245789999988 8999999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.97  E-value=1e-28  Score=231.54  Aligned_cols=327  Identities=14%  Similarity=0.126  Sum_probs=231.6

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCC-----CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc---cCCC
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADE-----GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGD  114 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~---~~gd  114 (398)
                      ++|+.+++++.+.+...  ..++...     ...+..+.+.+.+.+.++.++++|++++|+|++++.++.++.   .+|+
T Consensus        10 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~   87 (379)
T TIGR03402        10 RVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKR   87 (379)
T ss_pred             CCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence            35789999998877542  2222111     113344555566666678888899999999999999998864   3568


Q ss_pred             EEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          115 SVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       115 ~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      +|++...+|+++..   .++..|.+++.+ +.+.+ +.+|++.+++.+++++  +++++++++||||.++|   +++|.+
T Consensus        88 ~vv~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-g~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~~---~~~I~~  160 (379)
T TIGR03402        88 HIITTAVEHPAVLSLCQHLEKQGYKVTYL-PVDEE-GRLDLEELRAAITDDT--ALVSVMWANNETGTIFP---IEEIGE  160 (379)
T ss_pred             eEEEcccccHHHHHHHHHHHHcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEEcccCCeeeccc---HHHHHH
Confidence            89998888876553   334569999988 77654 4689999999998765  99999999999999999   788999


Q ss_pred             HHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCCCcc
Q 015890          192 LCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICAS  267 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~  267 (398)
                      +|+++|+++++|+++ ++.....  ....+.++++.|.+|.+|++|  +|+++.++.. .+...+.   ........+.+
T Consensus       161 l~~~~g~~vivD~~~~~g~~~~~--~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~-~~~p~~~g~~~~~~~~~gt~~  235 (379)
T TIGR03402       161 IAKERGALFHTDAVQAVGKIPID--LKEMNIDMLSLSGHKLHGPKG--VGALYIRKGT-RFRPLLRGGHQERGRRAGTEN  235 (379)
T ss_pred             HHHHcCCEEEEECcccccccccC--cccCCCCEEEEcHHHcCCCCc--eEEEEECCCC-CCCCcccCCccCCCcCCCCcc
Confidence            999999999999999 5542222  222334578889999777666  6777766421 1100000   00011245677


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      .+...++.++++...+++++..++.+++++++.+.|.+ ++.+.+..+..   +..+.+.++.  .+..++...| +++|
T Consensus       236 ~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~g  312 (379)
T TIGR03402       236 VPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY--IEGEAILLLL-DMEG  312 (379)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC--CCHHHHHHhh-ccCC
Confidence            77788788888764456777778888889999998875 66655554321   1122223332  2466777765 6889


Q ss_pred             eEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          344 VVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       344 i~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      |.+++|..|..                   ++.||+|++. ++++|++++++.|+++++++.+
T Consensus       313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~  375 (379)
T TIGR03402       313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA  375 (379)
T ss_pred             EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999987732                   3689999999 8999999999999999887653

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.97  E-value=5.2e-28  Score=226.43  Aligned_cols=345  Identities=16%  Similarity=0.118  Sum_probs=243.1

Q ss_pred             chHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe
Q 015890           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT   95 (398)
Q Consensus        16 ~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~   95 (398)
                      ...++.+++..+++-++-.+ .+.....++|.+.+++.+++.... .......+..++.+.+++.+.+.+|.++.+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~   82 (371)
T PRK13520          5 EEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL-GDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYIT   82 (371)
T ss_pred             HHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEe
Confidence            34555555555555443333 344344568898999988776421 1111123455666777777777778877788999


Q ss_pred             cChHHHHHHHHHHhcc----CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890           96 AGANQAFVNIVLTLCD----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      +|+++++..++.++..    ++++|++..++|+.+...++..|.+++.+ +.+.+ +.+|++.|++.+++++  ++|++.
T Consensus        83 ~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~vi~~  158 (371)
T PRK13520         83 SGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRA-PLDDD-YRVDVKAVEDLIDDNT--IGIVGI  158 (371)
T ss_pred             cCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEe-cCCCC-CcCCHHHHHHHHhhCC--EEEEEE
Confidence            9999999999887754    57899999999999998889999999988 77643 4689999999998765  777777


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ec--cCCCc--cccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM--YDGRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~--~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      +++|+||.+.|   +++|.++|+++|+++++|++|  +.  +....  ......+...+..|.+|+. .+|.++|+++..
T Consensus       159 ~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~-~a~~~~G~~~~~  234 (371)
T PRK13520        159 AGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMG-LAPIPAGGILFR  234 (371)
T ss_pred             cCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcccc-CccCCceEEEEc
Confidence            88999999999   999999999999999999999  22  21111  1111122345566788954 467888987765


Q ss_pred             CCcHHHHHHHHHhhccC--------CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCC
Q 015890          246 SEVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGE  315 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~  315 (398)
                      +  +++++.+.......        ..+.+.....++.++++. ..+.+++..++..++++++.+.|++.+. . +..+.
T Consensus       235 ~--~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~  311 (371)
T PRK13520        235 D--ESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGF-EPVIEPV  311 (371)
T ss_pred             C--HHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCC-EEecCCC
Confidence            4  55666553221111        112334456666666654 2344677888899999999999988754 5 44444


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                       .+++.+.++    +..++..+|. ++||.+.++.   .++++|++++. .+++|++++++.|+++++
T Consensus       312 -~~~v~~~~~----~~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        312 -LNIVAFDDP----NPDEVREKLR-ERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             -ceEEEEecC----CHHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence             667777775    3567777775 7799998753   45789999876 689999999999987654

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.97  E-value=2.7e-28  Score=227.09  Aligned_cols=318  Identities=17%  Similarity=0.183  Sum_probs=229.9

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      |..+++.+.+++......     +  .....+..+.+.+.++++++++++  .|++++|+++++..++.+++.++|++++
T Consensus         7 p~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~   79 (355)
T TIGR03301         7 PLSTSATVRDAMLVDWCH-----W--DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLV   79 (355)
T ss_pred             CCCCCHHHHHHhhhhccC-----C--CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEE
Confidence            555788888888773211     1  112235555666666666677654  5788999999999999999988888887


Q ss_pred             eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      ..+++++  +...++..|.+++.+ +.+. ++.+|++++++.++++++.+++++++++||||...+   +++|+++|+++
T Consensus        80 ~~~~~~~~~~~~~a~~~g~~~~~i-~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~  154 (355)
T TIGR03301        80 LINGAYGERLAKICEYLGIPHTDL-NFSE-YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH  154 (355)
T ss_pred             ECCCchhhHHHHHHHHcCCceEEE-ecCC-CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc
Confidence            7777655  346678899999988 7654 346899999999986555678888899999999998   89999999999


Q ss_pred             CCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890          197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ---------------  259 (398)
Q Consensus       197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~---------------  259 (398)
                      |+++|+|+++ ++.  .+......+.+++++|++|++ |++|  +||++++   +++++.+....               
T Consensus       155 ~~~livD~~~s~g~--~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (355)
T TIGR03301       155 GAVLIVDAMSSFGA--IPIDIEELDVDALIASANKCLEGVPG--FGFVIAR---RDLLEASAGNARSLYLDLYDQWAYME  227 (355)
T ss_pred             CCEEEEEeccccCC--cccchhhcCccEEEecCCcccccCCc--eeEEEEC---HHHHHHhhCCCCCceeeHHHHHHHhh
Confidence            9999999877 543  222223335568899999987 4445  6999999   77777654210               


Q ss_pred             --ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCC-CCh
Q 015890          260 --DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LDD  331 (398)
Q Consensus       260 --~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~  331 (398)
                        ....++++...+.++..+++..  ...+.+..++++++++++.+.|++++. .+..+   .++.++++.++... .+.
T Consensus       228 ~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (355)
T TIGR03301       228 KTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF-QPLLPERWQSPIIVSFLYPDDPDFDF  306 (355)
T ss_pred             hcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC-eeecCCCCCCCcEEEEECCCCCcchH
Confidence              1134567777777777777642  123577777888899999999988765 43322   23456777776422 234


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .++..++ .++||.+.++..+.. +++||++.. .+.++++++++.|+++
T Consensus       307 ~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       307 DDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA  354 (355)
T ss_pred             HHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            5677766 588999999865433 799999865 7899999999999865

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=4.7e-29  Score=233.54  Aligned_cols=317  Identities=19%  Similarity=0.148  Sum_probs=224.1

Q ss_pred             CcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhcc---CCCE
Q 015890           44 PPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCD---AGDS  115 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~----~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~---~gd~  115 (398)
                      +|+.+++++.+.+......    .+.......+..+.+.+.+.+.++.+ ++++++++|++++++.++.++..   +||+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~   90 (373)
T cd06453          11 KPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDE   90 (373)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCE
Confidence            4788999998877442110    11111112233333444444444776 77899999999999999999987   8999


Q ss_pred             EEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          116 VVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       116 Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      |+++.++|++.    ...++..|++++.+ +.+. ++.+|++++++.++++  +++|++++++||||.+.|   +++|.+
T Consensus        91 vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~--~~~v~~~~~~~~tG~~~~---~~~i~~  163 (373)
T cd06453          91 IVTSVMEHHSNIVPWQQLAERTGAKLKVV-PVDD-DGQLDLEALEKLLTER--TKLVAVTHVSNVLGTINP---VKEIGE  163 (373)
T ss_pred             EEECcchhHHHHHHHHHHHhhcCcEEEEe-ecCC-CCCcCHHHHHHHhcCC--ceEEEEeCcccccCCcCC---HHHHHH
Confidence            99999999874    33445779999988 7764 4568999999999875  499999999999999999   889999


Q ss_pred             HHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc---------
Q 015890          192 LCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN---------  261 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~---------  261 (398)
                      +|+++|+++|+|++| ++.....  ....+.++++.|++|+++.  .++|+++++   +++++.+......         
T Consensus       164 ~~~~~~~~li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~~~--~g~g~~~~~---~~~~~~~~~~~~g~~~~~~~~~  236 (373)
T cd06453         164 IAHEAGVPVLVDGAQSAGHMPVD--VQDLGCDFLAFSGHKMLGP--TGIGVLYGK---EELLEEMPPYGGGGEMIEEVSF  236 (373)
T ss_pred             HHHHcCCEEEEEhhhhcCceeee--ccccCCCEEEeccccccCC--CCcEEEEEc---hHHhhcCCCeecCCCccccccc
Confidence            999999999999999 4332111  1112345777899999974  568999988   6776665433210         


Q ss_pred             ------------CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCCC
Q 015890          262 ------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPE  326 (398)
Q Consensus       262 ------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~  326 (398)
                                  ...+++.....++..+++.. +..+++..++.+++++++.+.|++++++.+..+.  .+.++++.++.
T Consensus       237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  316 (373)
T cd06453         237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEG  316 (373)
T ss_pred             cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECC
Confidence                        11244555555555555431 1235677778888899999999888765655321  24566777653


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                        .+..++.+.|. ++||.+.+|..|.        .+++||++++. .+++|++++++.|
T Consensus       317 --~~~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         317 --IHPHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             --cCHHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence              25677777774 7999998877542        36799999998 7899999988764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.97  E-value=1.9e-28  Score=231.74  Aligned_cols=331  Identities=16%  Similarity=0.116  Sum_probs=229.0

Q ss_pred             CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      |+++++|+.++ -++..+|++.+++.+++.+...+      .|++.+...++++.+++++    +. ++. +++++|+++
T Consensus        45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g~-~~~-~~~~sG~~a  118 (407)
T PRK09064         45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----GK-EAA-LVFTSGYVS  118 (407)
T ss_pred             CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----CC-CcE-EEECcHHHH
Confidence            47789998875 56678999999999887653221      1222333445555555554    53 344 455556688


Q ss_pred             HHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015890          102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS  177 (398)
Q Consensus       102 ~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt  177 (398)
                      +..++..+..  +++.|+.....|......++..|.++..+ +.      .|++++++.++..  ..+++|++++++|++
T Consensus       119 n~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~  191 (407)
T PRK09064        119 NDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIF-RH------NDVAHLEELLAAADPDRPKLIAFESVYSMD  191 (407)
T ss_pred             HHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCC
Confidence            8888887764  66666666556666656667777776555 32      3778888887621  235899999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cC--CCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YD--GRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~--~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      |.+.+   +++|.++|+++|+++|+||+| ++ +.  |.....   ...+.+++++|+||+||++|   ||++++   ++
T Consensus       192 G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~---~~  262 (407)
T PRK09064        192 GDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS---AA  262 (407)
T ss_pred             ccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC---HH
Confidence            99999   999999999999999999999 43 22  211111   11234688999999998777   999988   78


Q ss_pred             HHHHHHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890          251 FATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  328 (398)
Q Consensus       251 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  328 (398)
                      +++.+......+  +.+.++..++++.++++.... .....+++.++++++.+.|++.+. .+..+. ++++.+.++.. 
T Consensus       263 ~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~iv~i~~~~~-  338 (407)
T PRK09064        263 LVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE-SNEERERHQERAAKLKAALDAAGI-PVMPNE-SHIVPVMVGDP-  338 (407)
T ss_pred             HHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence            888776554322  334566667777777764222 133456778888999999988765 555554 66666666431 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ....++.++|++++||.+++...+..   .+++||+++. .+++|++++++.|+++++++.
T Consensus       339 ~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~  399 (407)
T PRK09064        339 EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG  399 (407)
T ss_pred             HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            23567888887667999988654332   3679999987 789999999999999987653

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.97  E-value=5.3e-28  Score=225.85  Aligned_cols=322  Identities=17%  Similarity=0.151  Sum_probs=231.9

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      |..+++.+++++...+ .    .+  .....+..+.+.+.++++.+.++  +.+++++|+++++..++.++..+||+|++
T Consensus        13 P~~~~~~~~~a~~~~~-~----~~--~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv   85 (368)
T PRK13479         13 PLTTSRTVREAMLRDW-G----SW--DDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLV   85 (368)
T ss_pred             CCCCCHHHHHHhCCCC-C----CC--ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEE
Confidence            5567888888876543 1    11  11233455555555666667754  45889999999999999999999999999


Q ss_pred             eCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      +.++|++.  ...++..|++++.+ +.+.+ +.+|++++++.++.+++.++|++++++||||...|   +++|.++|+++
T Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~  160 (368)
T PRK13479         86 PDNGAYGARIAQIAEYLGIAHVVL-DTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH  160 (368)
T ss_pred             EeCCchHHHHHHHHHHcCCcEEEE-ECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc
Confidence            99888775  36778899999998 77643 46799999999976554688999999999999999   88999999999


Q ss_pred             CCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890          197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ---------------  259 (398)
Q Consensus       197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~---------------  259 (398)
                      |+++|+|+++ ++..  +......+..++++|++|++ |++|  +||++++   +++++.+....               
T Consensus       161 ~~~livDa~~~~g~~--~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (368)
T PRK13479        161 GKRLIVDAMSSFGAI--PIDIAELGIDALISSANKCIEGVPG--FGFVIAR---RSELEACKGNSRSLSLDLYDQWAYME  233 (368)
T ss_pred             CCEEEEEcccccCCc--cccccccCceEEEecCccccccCCC--ceEEEEC---HHHHHHhhcCCCCeeecHHHHHhhhc
Confidence            9999999776 5432  22222233457788999976 5566  6999999   67777654321               


Q ss_pred             --ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCC-CCCh
Q 015890          260 --DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEK-HLDD  331 (398)
Q Consensus       260 --~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~  331 (398)
                        ....++++.+.+.++.++++..  ..++++..+++.++++++++.|++++. .+..+.   ......+.++.. ..+.
T Consensus       234 ~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (368)
T PRK13479        234 KTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGF-EPLLDAEIQSPIIVTFHAPADPAYDF  312 (368)
T ss_pred             ccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-cccCCchhcCceEEEEECCCCCCcCH
Confidence              1222466777777777776642  234577778899999999999988876 433221   112233334332 1256


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cCCCHHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .++.++|. ++||.+.+|..+ ..+++|++. +..++++++++++.|+++++++
T Consensus       313 ~~l~~~L~-~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        313 KEFYERLK-EQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             HHHHHHHH-HCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            67888775 789999987543 356899986 5488999999999999988764

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=9.1e-29  Score=219.80  Aligned_cols=343  Identities=17%  Similarity=0.184  Sum_probs=255.5

Q ss_pred             HHcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           26 VRGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        26 ~~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      ..+|+.|+||..|.  +.++ .+|.+.++++++..+-+..   ......+.+.++++.|.+..+ ..+.|++++|++||+
T Consensus        38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~---sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~  113 (404)
T COG4992          38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHV---SNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEAN  113 (404)
T ss_pred             CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhc---ccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHH
Confidence            45799999999765  4554 6899999999998763211   222224556677777766555 578999999999999


Q ss_pred             HHHHHHhcc----C-CCEEEEeCCCCcChhhHHHhcCcEEEEe---ccCCC----CCCCCChHHHHHhhccCCCCeEEEE
Q 015890          103 VNIVLTLCD----A-GDSVVMFAPYYFNSYMSFQMTGVTHILV---GPCSS----KTLHPDADWLEKTLETKPTPKLVSV  170 (398)
Q Consensus       103 ~~~~~~l~~----~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~---~~~~~----~~~~~d~e~l~~~l~~~~~~~~v~i  170 (398)
                      +.++....+    + ..+|+....+|++-...+-..+.+..+.   .|..+    ..| -|++++++++++++  .+|++
T Consensus       114 EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-nDi~al~~ai~~~t--aAviv  190 (404)
T COG4992         114 EAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-NDIEALEAAIDEDT--AAVIV  190 (404)
T ss_pred             HHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-CCHHHHHHHhccCe--EEEEE
Confidence            999998652    2 2489999999987554333333322111   01111    112 28999999999965  99999


Q ss_pred             eCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          171 VNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       171 ~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      +..+...|++ .+++.++++.++|++||+++|.||++  ++.+|..+....++....+.++.|.+| +|+++|+++.+  
T Consensus       191 EPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~Lg-GG~PigA~la~--  267 (404)
T COG4992         191 EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALG-GGFPIGAMLAT--  267 (404)
T ss_pred             ecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeecccc-CCccceeeEEc--
Confidence            9889999996 56678999999999999999999999  777776554443333344558899998 88999999998  


Q ss_pred             cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890          248 VEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  325 (398)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                       +.+.+.+.......+++.|+.+.+++.+.|+. . ++.+++..+.-...++.|.+...+.+.++-+... |+++-+.+.
T Consensus       268 -~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~-GLmiGiel~  345 (404)
T COG4992         268 -EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGR-GLMIGIELK  345 (404)
T ss_pred             -hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecc-eeEEEEEec
Confidence             56666677777788999999999999999986 2 2444555555555666677766666655666677 888888887


Q ss_pred             CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ... ...+++..+ .++|+.+.+.    .++.||+...- .+++++++++++|.+++.....
T Consensus       346 ~~~-~a~~~~~~~-~~~gvL~~~a----~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~  401 (404)
T COG4992         346 EPY-RARDIVRAL-REEGVLVLPA----GPNVIRFLPPLVITEEEIDEALDALERALAAASA  401 (404)
T ss_pred             Ccc-cHHHHHHHH-HHCCeEEecC----CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence            543 467788876 5899999886    47799999888 8999999999999999987654

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=2.2e-28  Score=212.22  Aligned_cols=336  Identities=22%  Similarity=0.362  Sum_probs=250.3

Q ss_pred             cHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhc-cCCCEEEEe
Q 015890           45 PKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMF  119 (398)
Q Consensus        45 ~~~v~~a~~~~~~~--~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~  119 (398)
                      |..+++.....+..  ++.+.|..+.|.+-+|+.+++|+.++-|.  ++++|++|+|++.|+..++..++ .+.+.|++|
T Consensus        88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliP  167 (475)
T KOG0258|consen   88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIP  167 (475)
T ss_pred             CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEee
Confidence            44555555555542  35788999999999999999999999874  57899999999999999999987 456899999


Q ss_pred             CCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890          120 APYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       120 ~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~  195 (398)
                      -|-|+-|......+|...+.+ ..+ +.+|.+|.++|++.++   ..-.++++++.||.||||.+++.+.+++|+.+|.+
T Consensus       168 iPQYPLYsAti~l~~~~~v~Y-yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~  246 (475)
T KOG0258|consen  168 IPQYPLYSATISLLGGTQVPY-YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAE  246 (475)
T ss_pred             cCCCchhHHHHHHhCCcccce-eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHH
Confidence            999999999999999988877 555 4579999999998876   33347899999999999999999999999999999


Q ss_pred             cCCEEEEeece--eccC-CCccccc---------cC-Cc--EEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890          196 AGSWLVVDNTY--FMYD-GRKHCCV---------EG-DH--VVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       196 ~~~~livDe~~--~~~~-~~~~~~~---------~~-~~--~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                      ++++++.||+|  -.|. +.++...         .+ ++  .+..+|.||.+ |-.|.|.||+-.-+..++..+.+.+..
T Consensus       247 ~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~  326 (475)
T KOG0258|consen  247 EGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLA  326 (475)
T ss_pred             cCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHH
Confidence            99999999999  3332 2222211         11 22  35567889988 447899999754443355555554443


Q ss_pred             ccCCCCcchHHHHHHHHHhcC---Cch-------HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC--CC
Q 015890          260 DNIPICASIISQHLALYSLQT---GPE-------WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--EK  327 (398)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~l~~---~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~--~~  327 (398)
                      . ...+++...|........-   ++.       .-......++.++..+.+.+..+.++.+..++|++|.+.++.  ..
T Consensus       327 s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~k  405 (475)
T KOG0258|consen  327 S-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPK  405 (475)
T ss_pred             h-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHH
Confidence            2 3456667777766666653   221       123345566777788889999998889999999999986653  21


Q ss_pred             ---------CCChHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          328 ---------HLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       328 ---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                               ...+.-.+.+||++.||++.||+.|++.   -|+|.++-.+.   + ..+++++++=+++..
T Consensus       406 aie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~---~-~~i~~~~~fH~~f~~  472 (475)
T KOG0258|consen  406 AIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG---L-EIIEKFKKFHAEFMD  472 (475)
T ss_pred             HHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch---h-HHHHHHHHHHHHHHH
Confidence                     1234456788999999999999999863   37999887522   3 666777666666554

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.97  E-value=1.3e-28  Score=230.93  Aligned_cols=328  Identities=16%  Similarity=0.139  Sum_probs=230.5

Q ss_pred             EcCCccCCCCCcHHHHHHHHHhhcCCC----CCCCCCC----CCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHH
Q 015890           34 SLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGAD----EGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVN  104 (398)
Q Consensus        34 ~l~~g~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~----~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~  104 (398)
                      .|+.+.+++++|+.+++++.+.+.+..    ...|...    ....++++.+++++    +.+. ++|++++|++++++.
T Consensus         2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~al~~   77 (376)
T TIGR01977         2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAPSSAHVVFTNNATTALNI   77 (376)
T ss_pred             CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHHHHHHH
Confidence            466677777788999999988776532    1123221    33345555555555    6643 589999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ++.+++++||+|+++.++|.++.    ..++..|.+++.+ +.+.+ +.+|++++++.+++++  ++|++++|+||||.+
T Consensus        78 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~n~tG~~  153 (376)
T TIGR01977        78 ALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIV-KCDNE-GLISPERIKRAIKTNT--KLIVVSHASNVTGTI  153 (376)
T ss_pred             HHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCC--eEEEEECCCCCcccc
Confidence            99999999999999999997754    3445669999988 76643 5689999999997654  999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-  258 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-  258 (398)
                      +|   +++|.++|+++|+++|+|+++ ++......  ...+.++++.|.+|+++.|. ..|.++.++.  ..+..+... 
T Consensus       154 ~~---~~~i~~l~~~~~~~livD~a~~~g~~~~~~--~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~--~~~~~~~~~~  225 (376)
T TIGR01977       154 LP---IEEIGELAQENGIFFILDAAQTAGVIPIDM--TELAIDMLAFTGHKGLLGPQ-GTGGLYIREG--IKLKPLKSGG  225 (376)
T ss_pred             CC---HHHHHHHHHHcCCEEEEEhhhccCccCCCc--hhcCCCEEEecccccccCCC-CceEEEEcCC--cCcCceecCC
Confidence            99   888999999999999999999 65433221  22344588899999985332 3566665542  111111100 


Q ss_pred             ---------------hccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccE
Q 015890          259 ---------------QDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAI  318 (398)
Q Consensus       259 ---------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~  318 (398)
                                     ......+.+.+...++..+++... ...++..++...+.+++.+.|.+.+++.+..+.    ...
T Consensus       226 ~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~  305 (376)
T TIGR01977       226 TGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVG  305 (376)
T ss_pred             CccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCC
Confidence                           001123456666666666665411 234566777888889999999877765665431    134


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------CRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      .+++.++.  .+..++...|.+++||.+..|..|.          ..+.||++++. .+++|+++++++|++
T Consensus       306 ~v~~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       306 VVSFTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             eEEEEECC--CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            56666653  2567788877644599999987653          34789999988 899999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.97  E-value=2.1e-28  Score=230.00  Aligned_cols=334  Identities=12%  Similarity=0.132  Sum_probs=227.7

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|..  .++ .+|.+.+++.+++.+....  .. ....+....+++.+....+  .+.+++++++++|+.
T Consensus        37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~--~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e  111 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT--SR-AFHSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVE  111 (396)
T ss_pred             CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccc--cc-ccCCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHH
Confidence            46888999987643  232 5899999999998763211  11 1122334445555554434  358999999999999


Q ss_pred             HHHHHhcc---------CC-CEEEEeCCCCcChhhHHH-hcCcEEEE--eccCCCCC---CCCChHHHHHhhccCCCCeE
Q 015890          104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQ-MTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKL  167 (398)
Q Consensus       104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~-~~g~~~~~--~~~~~~~~---~~~d~e~l~~~l~~~~~~~~  167 (398)
                      .+++....         +| ++|+....+|++....+. ..+.....  +.+....-   ...|++.+++.++++  +++
T Consensus       112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~  189 (396)
T PRK04073        112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPN--TAA  189 (396)
T ss_pred             HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccC--eEE
Confidence            99998742         34 689999999988664332 22211000  00110000   012789999998765  489


Q ss_pred             EEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          168 VSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       168 v~i~~p~nptG~~~~~-~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      |++++++||+|.++++ +++++|.++|+++|+++|+||+|  +++.+........+....+.++||.+|.+|+|+||+++
T Consensus       190 viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~  269 (396)
T PRK04073        190 FLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAA  269 (396)
T ss_pred             EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEE
Confidence            9999999999998765 47999999999999999999999  65555322211111112244679999988899999999


Q ss_pred             cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--CCccccCCccEEEEe
Q 015890          245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWA  322 (398)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~  322 (398)
                      +   +++++.+.......+++.++..++++.++|+...+  +...++..++.+++.+.|++++  .+....+. ++++++
T Consensus       270 ~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~  343 (396)
T PRK04073        270 N---RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGV  343 (396)
T ss_pred             c---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEE
Confidence            9   78888876554556778899999999999874211  1233445566777777776653  22333445 677888


Q ss_pred             eCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      .++.   +..++.++|+ ++||.+.+.    .+++|||+++. .+++++++++++|.+++
T Consensus       344 ~~~~---~~~~~~~~l~-~~Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        344 ELNE---PARPYCEALK-EEGLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             Eecc---hHHHHHHHHH-HCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence            8763   4567888775 789999763    35789999765 69999999999998765

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=5.8e-28  Score=226.19  Aligned_cols=333  Identities=16%  Similarity=0.166  Sum_probs=229.8

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|..  .++ .+|++.+++.+++.+..  .. ......+++..+++++.+..+  .+.+++++|+++|+.
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~a~~  100 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW--HV-SNLFTNSLQEEVASLLAENSA--GDLVFFCNSGAEANE  100 (377)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--cc-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHHHHH
Confidence            57899999988752  222 68999999999987631  12 223446788999999877654  357999999999999


Q ss_pred             HHHHHhc-cCC-CEEEEeCCCCcChhhHH-HhcCcEEEE--eccCCCC-CC--CCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSK-TL--HPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       104 ~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~-~~--~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      .+++... .+| ++|++.+++|++..... ...+.....  +.+...+ .+  ..|++.+++.+.++  +++|+++.+++
T Consensus       101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~ii~e~i~~  178 (377)
T PRK02936        101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEE--VAAVMLEVVQG  178 (377)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCC--eEEEEEecccC
Confidence            9999653 234 67999999998755322 222221100  1011111 00  12789999998755  48999998899


Q ss_pred             CCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       176 ptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      ++|.. .+++++++|.++|++||+++|+||+|  +++.+........+....+.++||.++ +|+|+||++++   +++.
T Consensus       179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~G~~ig~v~~~---~~~~  254 (377)
T PRK02936        179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG-NGIPVGAMIGK---KELG  254 (377)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc-CCCccEEEEEc---HHHH
Confidence            99886 58899999999999999999999999  666554322111111111347899998 89999999998   7888


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCCCccccCCccEEEEeeCCCCC
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVKGGEGAIYLWARLPEKH  328 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~  328 (398)
                      +.+.......+++.+++.++++.++|+...  .++..++++++.+.+++.|+    +++.+....+. +.++|+.++.  
T Consensus       255 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~~~~i~~~~--  329 (377)
T PRK02936        255 TAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGK-GLMIGIECTE--  329 (377)
T ss_pred             hhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-ceEEEEEecc--
Confidence            877655444566789999999999997521  12233344444444444443    34432223344 7889999874  


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                       +...+...+ .++||.+.|+    ..+++|++++. .+++++++++++|.+++
T Consensus       330 -~~~~~~~~l-~~~gv~v~~~----g~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        330 -EVAPVIEQL-REEGLLVLSA----GPNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             -hHHHHHHHH-HHCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence             245666655 5899999885    35799999754 78999999999998753

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.97  E-value=5.3e-28  Score=227.90  Aligned_cols=334  Identities=14%  Similarity=0.124  Sum_probs=231.9

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC--CCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY--GADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y--~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+.|+.+.+. +.|+.+++++.+.+.......+  ....+  ..+..+.+.+.+.+.++.++++|++++|+|++++.++.
T Consensus         4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~   82 (402)
T TIGR02006         4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIK   82 (402)
T ss_pred             cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHH
Confidence            4666666544 5689999999887643211111  00001  11233344444455558888899999999999999887


Q ss_pred             Hhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          108 TLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       108 ~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ++.    ++||+|+++.++|+.....+   +..|.+++.+ +.+++ +.+|++.+++.+++++  ++|++++++||||.+
T Consensus        83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~v~~~~n~tG~~  158 (402)
T TIGR02006        83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL-PPKSN-GLIDLEELKAAIRDDT--ILVSIMHVNNEIGVI  158 (402)
T ss_pred             HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCC--EEEEEECCCcCceec
Confidence            763    67899999999998765443   4568999998 77644 4689999999998765  999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-  258 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-  258 (398)
                      .|   +++|.++|+++|+++++|+++ ++......  ...+.++++.|.+|.+|++|  +|++++++   +....+... 
T Consensus       159 ~~---~~~I~~l~~~~g~~livD~a~a~g~~~~~~--~~~~~D~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~  228 (402)
T TIGR02006       159 QD---IAAIGEICRERKVFFHVDAAQSVGKIPINV--NELKVDLMSISGHKIYGPKG--IGALYVRR---KPRVRLEALI  228 (402)
T ss_pred             cc---HHHHHHHHHHcCCEEEEEcchhcCCcccCc--cccCCCEEEEehhhhcCCCc--eEEEEEcc---CCCCCCCcee
Confidence            99   889999999999999999999 55432222  22334588889999887556  68887774   211111111 


Q ss_pred             ------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCC
Q 015890          259 ------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHL  329 (398)
Q Consensus       259 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~  329 (398)
                            ......+.+.....++..+++.....++...++.+++++++.+.|+.++.+.+..+..   ...+.+.++.  .
T Consensus       229 ~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~--~  306 (402)
T TIGR02006       229 HGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY--V  306 (402)
T ss_pred             cCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC--c
Confidence                  0112356677777777777765344567778889999999999998877655543211   1112233432  2


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +..++...+   ++|.++.|..|..                   .+.||+|++. +|++|++++++.|.++++++.
T Consensus       307 ~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~  379 (402)
T TIGR02006       307 EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR  379 (402)
T ss_pred             CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344554433   5999988887742                   2689999999 899999999999999988764

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.97  E-value=2.5e-27  Score=221.94  Aligned_cols=334  Identities=16%  Similarity=0.138  Sum_probs=228.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC---CCC----CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYG----ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~---~y~----~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      ..++++..-.-.-++++.+++++.+........   .+.    ..+...++++.+++++    |.  +++++++|+++++
T Consensus        18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~   91 (387)
T PRK09331         18 EEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGK   91 (387)
T ss_pred             ccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHH
Confidence            356776643333356899999999887432111   111    1233466666666665    54  4678899999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccC-----CCCeEEEEeCCCCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNP  176 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~-----~~~~~v~i~~p~np  176 (398)
                      ..++.+++++||+|+++.++|++....++..|++++.+ +.+ +.++.+|++.+++.++..     +.+++|++++|+|+
T Consensus        92 ~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~  170 (387)
T PRK09331         92 FAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREV-PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGN  170 (387)
T ss_pred             HHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence            99999999999999999999988888889999999999 763 234578999999998742     24699999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      ||.+.+   +++|+++|+++|+++|+|++| ++..+.  .....+.+++++|++|+++ ++.++|+++++   +++++.+
T Consensus       171 tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~~--~~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~---~~~i~~~  241 (387)
T PRK09331        171 YGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMPV--DGKKLGADFIVGSGHKSMA-ASAPSGVLATT---EEYADKV  241 (387)
T ss_pred             Cccccc---HHHHHHHHHHcCCEEEEECCcccCCcCC--CHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhc
Confidence            999999   999999999999999999999 543221  1122345688999999997 55689999998   6777776


Q ss_pred             HHhhcc--------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEEeeCC
Q 015890          256 LKVQDN--------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLP  325 (398)
Q Consensus       256 ~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~  325 (398)
                      ......        ...+.+.....++.++++...+.. +..++..++.+++++.|+++++++++.  +...+++.++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~  320 (387)
T PRK09331        242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP  320 (387)
T ss_pred             ccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC
Confidence            443211        111222222333333443211222 334455667778999999985546653  222455555554


Q ss_pred             CC-------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          326 EK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       326 ~~-------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..       ..+..++.+.| .++||...+.   +....+|++....+.+++++++++|+++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~  382 (387)
T PRK09331        321 SFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY  382 (387)
T ss_pred             chhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence            11       11235677777 4789985432   23456777764468999999999999887763

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=3.9e-27  Score=222.37  Aligned_cols=334  Identities=14%  Similarity=0.087  Sum_probs=228.5

Q ss_pred             CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      ++++++|+.++ -.+..+|++++++.+++.+....  ......+..+..+.+.+.+.+.++.  +..++++++++++..+
T Consensus        44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~a  121 (406)
T PRK13393         44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAA  121 (406)
T ss_pred             CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHH
Confidence            46788988875 45557999999999998753211  1111112233344444444444453  4556666666899999


Q ss_pred             HHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015890          106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       106 ~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~  181 (398)
                      +..+.+  +|+.|+.....|......++..|.++..+ +.      .|++.+++.++.  ...+++|++++++|++|.+.
T Consensus       122 i~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~  194 (406)
T PRK13393        122 LSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIF-RH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA  194 (406)
T ss_pred             HHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEe-CC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence            997765  67777766777766677777778877666 32      267777777752  12258899999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      |   +++|.++|+++|+++|+||+| ++.   .|.....   ...+.+++++|+||.+|++|   ||++++   +++++.
T Consensus       195 ~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~---~~~~~~  265 (406)
T PRK13393        195 P---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS---AALCDF  265 (406)
T ss_pred             C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC---HHHHHH
Confidence            9   999999999999999999999 333   2221111   11224677899999998777   999888   788887


Q ss_pred             HHHhhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          255 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       255 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +......+  +.+.++..++++.++|+...... ..+++++++.+++.+.|++.+. .+..+. ++++.+.+... .+..
T Consensus       266 l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~-~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~v~~~~~-~~~~  341 (406)
T PRK13393        266 IRSFASGFIFTTSLPPAVAAGALASVRHLKASS-AERERHQDRVARLRARLDKAGI-PHLPNP-SHIVPVMVGDP-VLCK  341 (406)
T ss_pred             HHHhCcCceecCccCHHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCeEEEEeCCH-HHHH
Confidence            77654432  34556677778888887522222 2235567778888888887654 455555 55555555321 1346


Q ss_pred             HHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++..+|++++||.++++....   +.++|||+++. .+++|+++++++|.+++.++
T Consensus       342 ~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        342 QISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             HHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            777877755799998865433   23689999987 79999999999999988764

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.97  E-value=1.1e-27  Score=226.67  Aligned_cols=347  Identities=13%  Similarity=0.078  Sum_probs=238.7

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~  102 (398)
                      .+|+.++||..|.....   .+|.+.+++.+++.+... .+......+ ....+++++....+.+. +.+++++++++|+
T Consensus        38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~~~~~~f~~sGsea~  115 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDFAKKTLLVTTGSEAV  115 (425)
T ss_pred             CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            57889999988754333   489999999999876431 221222222 34477777766555432 4788888888998


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEE----------------EeccCCCCCCCC--ChHHHHHhhcc-
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHI----------------LVGPCSSKTLHP--DADWLEKTLET-  161 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~----------------~~~~~~~~~~~~--d~e~l~~~l~~-  161 (398)
                      +.+++...  .+..+|+...++|++....+...+....                .+ |.+..+...  +++.+++.++. 
T Consensus       116 e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~  194 (425)
T PRK08088        116 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGVSEDDAIASIERIFKND  194 (425)
T ss_pred             HHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCC-CccccCccHHHHHHHHHHHHHhc
Confidence            88888754  2335788889999998766555432211                01 111111111  14568887751 


Q ss_pred             --CCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          162 --KPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       162 --~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                        ...+++|+++.. ++++....+++.+++|.++|++||+++|+||+|  +.+.+........+.++.+.|+||.++ +|
T Consensus       195 ~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G  273 (425)
T PRK08088        195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GG  273 (425)
T ss_pred             cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEecccc-CC
Confidence              233678888854 455556789999999999999999999999999  555553322222234455789999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +|+||++++   +++++.+.......+++.+++.++++.++|+..  ++++++.++...+.++.+.+.+++.+.+....+
T Consensus       274 ~rig~v~~~---~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g  350 (425)
T PRK08088        274 FPLAGVTGR---AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG  350 (425)
T ss_pred             CcceeeEec---HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec
Confidence            999999999   788888876666677888999999999999862  244555555555556666666556665333444


Q ss_pred             CccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       315 ~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      . |.++|+.+.+..       ....+++..+. ++||.+.++..+  ++.||++++. .+++++++++++|.+++++.
T Consensus       351 ~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~  424 (425)
T PRK08088        351 L-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA  424 (425)
T ss_pred             c-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence            4 888999984321       12456666665 789998875433  4789999996 78999999999999998753

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.96  E-value=4.5e-27  Score=221.56  Aligned_cols=339  Identities=15%  Similarity=0.139  Sum_probs=229.7

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|  ...++ .+|++.+++.+++.+...  +... ...+....+++.+.+..+  .+.++++++|++|+.
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e  111 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDATF--AERVFFANSGAEANE  111 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHH
Confidence            467889999876  33333 689999999998865221  1111 112233455555554433  358999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcEEE---EeccCCCC--C-CCCChHHHHHhhccCCCCeEEE
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSK--T-LHPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~~--~-~~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      .+++....        ..++|+..+.+|++....+...+....   .+.+....  . ...|++.+++.+.++  +++|+
T Consensus       112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aaii  189 (403)
T PRK05093        112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDH--TCAVV  189 (403)
T ss_pred             HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCC--eEEEE
Confidence            99997531        235799999999887543322211100   00010000  0 012789999988754  48888


Q ss_pred             EeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          170 VVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       170 i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      ++ |.||+|.+.  +.+.+++|.++|++||+++|+||+|  +.+.|........+....+.|+||.++ +|+|+||++.+
T Consensus       190 ie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~rig~vv~~  267 (403)
T PRK05093        190 VE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFPIGAMLTT  267 (403)
T ss_pred             Ee-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEeccccc-CCcceEEEEEc
Confidence            88 667776654  8899999999999999999999999  666664322111111122568999998 89999999999


Q ss_pred             CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Ccc-ccCCccEEEEe
Q 015890          246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAV-KGGEGAIYLWA  322 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~-~~~~~~~~~~~  322 (398)
                         +++++.+.......+++.+++.++++.++|+...  -.+..++++++.+.+.+.|++++.  ..+ ..+..+.++|+
T Consensus       268 ---~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~  342 (403)
T PRK05093        268 ---AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGA  342 (403)
T ss_pred             ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEE
Confidence               7888887654444567788999999998776421  134456777778888887776532  111 22234788898


Q ss_pred             eCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       323 ~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .++... ....+++..++ ++||.+.++    ..+++|++++. .+++++++++++|.+++.++
T Consensus       343 ~l~~~~~~~~~~~~~~l~-~~Gv~v~~~----g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~  401 (403)
T PRK05093        343 ELKPQYKGRARDFLNAAA-EEGVMVLVA----GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV  401 (403)
T ss_pred             EecCcchhHHHHHHHHHH-HCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            886432 13567888776 689999874    35799998777 58999999999999988654

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.96  E-value=7.9e-27  Score=221.32  Aligned_cols=358  Identities=17%  Similarity=0.132  Sum_probs=233.1

Q ss_pred             HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC-----CCCCCC-CCcHHHHHHHHHHHh
Q 015890            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI-----SKYGAD-EGLPELRDALVKKLN   82 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~~-~~~~~~~~~l~~~l~   82 (398)
                      .++++.+.....-+.+.....++.++|..+.++  +||.+++++...+.+...     ..|... .....+.+...+.++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la   81 (416)
T PRK00011          4 DNLAEYDPEIADAIEQELKRQEEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK   81 (416)
T ss_pred             hhhhhcCHHHHHHHHHHHHHHhcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence            344444433333333322334788999998877  689999998776532111     111111 112233332344666


Q ss_pred             hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh-----HHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                      +.+|.+..+|++++ +++++..++.+++++||+|+++.|+|.++..     .+...|++++.+ +.+.+++.+|++++++
T Consensus        82 ~~~g~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~  159 (416)
T PRK00011         82 ELFGAEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY-GVDEETGLIDYDEVEK  159 (416)
T ss_pred             HHhCCCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeec-CcCcccCCcCHHHHHH
Confidence            66787766666655 5689999999999999999999999975432     123345778777 7765556789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccCC
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~~  234 (398)
                      .++... +++|+++++++  |...+   +++|.++|+++|+++|+|++| ++.  .+....... ..+++++|+||++  
T Consensus       160 ~i~~~~-~k~v~~~~~~~--~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l--  230 (416)
T PRK00011        160 LALEHK-PKLIIAGASAY--SRPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTL--  230 (416)
T ss_pred             HHHhcC-CCEEEECCCcC--CCccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCC--
Confidence            997532 58888875544  45567   899999999999999999998 432  221111111 3457799999987  


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCC-cchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      +|.|.||+++++  +++++.+.........+ +....++++..++.. ..++++++.+++.++++++++.|++.|. ++.
T Consensus       231 ~g~~gg~i~~~~--~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~  307 (416)
T PRK00011        231 RGPRGGLILTND--EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVV  307 (416)
T ss_pred             CCCCceEEEeCC--HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eee
Confidence            578889999864  67888776655432222 223333333333322 2234677888899999999999988764 444


Q ss_pred             c-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-C-----CCCCeEEEEec-----CCCHHHHHHHHHHHHHH
Q 015890          313 G-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-C-----GCRGHLRISFG-----GLVEDDCKAAADRLRRG  380 (398)
Q Consensus       313 ~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~-----~~~~~iRi~~~-----~~~~~~~~~~~~~l~~~  380 (398)
                      . +..++++|+.++....+..++.+.| +++||.+..+.. +     ..++.+|++..     ..+++|++++++.|+++
T Consensus       308 ~~~~~~~~~~i~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~  386 (416)
T PRK00011        308 SGGTDNHLVLVDLRSKGLTGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV  386 (416)
T ss_pred             ecCCCCeEEEEeCcccCCCHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence            2 2235888888864322456666655 689999975431 1     13457999642     14688999999999887


Q ss_pred             HHH
Q 015890          381 LEE  383 (398)
Q Consensus       381 ~~~  383 (398)
                      +..
T Consensus       387 ~~~  389 (416)
T PRK00011        387 LDN  389 (416)
T ss_pred             Hhc
Confidence            664

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.96  E-value=4.3e-27  Score=222.14  Aligned_cols=343  Identities=11%  Similarity=0.088  Sum_probs=225.6

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.....   .+|.+.+++.+++...... . .. ...+..+.+.+.+.+..+.  +.++++++|++|+.
T Consensus        28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~-~-~~-~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e  102 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLT-S-RA-FYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGE  102 (400)
T ss_pred             CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccc-c-cc-ccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHH
Confidence            47889999988754433   5899999999987653211 1 11 1123445555655554443  57899999999999


Q ss_pred             HHHHHhcc----------CCCEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC---CCCCChHHHHHhhccCCCCeE
Q 015890          104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK---TLHPDADWLEKTLETKPTPKL  167 (398)
Q Consensus       104 ~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~---~~~~d~e~l~~~l~~~~~~~~  167 (398)
                      .++..+..          .+++|++.+.+|++.....-.. +.....  +.+....   -...|++.+++.++.. .+++
T Consensus       103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~  181 (400)
T PTZ00125        103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDP-NVAA  181 (400)
T ss_pred             HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCC-CeEE
Confidence            99998741          3478999999998866433222 211100  0011100   0113899999999732 3699


Q ss_pred             EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       168 v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      |++++++||+|.+++ .+++++|.++|++||+++|+||+|  +++.|........+....+.++||.++.+++|+||+++
T Consensus       182 v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~  261 (400)
T PTZ00125        182 FIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLA  261 (400)
T ss_pred             EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEE
Confidence            999988999999886 566999999999999999999999  65555322211111111123578999844459999999


Q ss_pred             cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh----ccCCCCccccCCccEEE
Q 015890          245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEGAVKGGEGAIYL  320 (398)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~~~  320 (398)
                      +   +++++.+.......+++.+++.++++.++|+...+  ....++.+++.+.+++.|    ...+.+....+. +.++
T Consensus       262 ~---~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~~~  335 (400)
T PTZ00125        262 N---DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK-GLLN  335 (400)
T ss_pred             c---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc-cEEE
Confidence            9   78888776554445667788888888777764111  011223333334444444    333443334444 6777


Q ss_pred             EeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          321 WARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       321 ~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ++.++.. ..+..+++++|+ ++||.+.|+    ..++|||+++. .+++++++++++|.++++++.+
T Consensus       336 ~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~  398 (400)
T PTZ00125        336 AIVFDHSDGVNAWDLCLKLK-ENGLLAKPT----HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFDS  398 (400)
T ss_pred             EEEEccCcchHHHHHHHHHH-HCCeEEeec----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhc
Confidence            7777531 224567788776 789999885    36789999765 7899999999999999988754

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.3e-26  Score=208.35  Aligned_cols=330  Identities=21%  Similarity=0.211  Sum_probs=261.8

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      |...+++|++++.+.+    .+  +.++.+.++.+.+.+.++..++.+. +.+++++++|.+++.++.+++.+||+||+.
T Consensus        13 P~~v~~~V~~am~~~~----~~--h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~   86 (383)
T COG0075          13 PVPVPPRVLLAMARPM----VG--HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV   86 (383)
T ss_pred             CCCCCHHHHHHhcCCC----CC--CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            6668899999987654    22  2555667777788888888888774 668888999999999999999999999999


Q ss_pred             CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (398)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (398)
                      ..+.++  +.+.++.+|.+++.+ ... .|-.+|++++++.|+.++.+++|.+++.-++||+..|   +++|+++|++||
T Consensus        87 ~nG~FG~R~~~ia~~~g~~v~~~-~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g  161 (383)
T COG0075          87 VNGKFGERFAEIAERYGAEVVVL-EVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG  161 (383)
T ss_pred             eCChHHHHHHHHHHHhCCceEEE-eCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence            999977  678999999999988 544 5567899999999997777899999999999999999   999999999999


Q ss_pred             CEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHH----------------hh
Q 015890          198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLK----------------VQ  259 (398)
Q Consensus       198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~----------------~~  259 (398)
                      .++|||.+. ++  +.+.....++.++++++..|.++. ||  +|.+..+   ++..+.+..                +.
T Consensus       162 ~l~iVDaVsS~G--g~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S---~~a~e~~~~~~~~~~ylDL~~~~~~~~  234 (383)
T COG0075         162 ALLIVDAVSSLG--GEPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVS---ERALEAIEERKHPSFYLDLKKWLKYME  234 (383)
T ss_pred             CEEEEEecccCC--CcccchhhcCccEEEecCchhccCCCc--cceeEEC---HHHHHHHhcCCCCceeecHHHHHHHHh
Confidence            999999877 55  455566666777889999999974 55  5777777   444433321                11


Q ss_pred             --ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC--CccEEEEeeCCCCCCChHHH
Q 015890          260 --DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEV  334 (398)
Q Consensus       260 --~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  334 (398)
                        ..+++|++.....++..+|+.. .+.++++.++++++.+.+++.++.+|+..+..+  .......+..|++. ++.+.
T Consensus       235 ~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~-~~~~~  313 (383)
T COG0075         235 KKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGV-DDKKV  313 (383)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCC-CcHHH
Confidence              3678899999999999999863 355899999999999999999999988333312  22345566677765 34444


Q ss_pred             HHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcccc
Q 015890          335 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGM  389 (398)
Q Consensus       335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~  389 (398)
                      ...+++++|+.+.+|........+||+... .+..++...+.+|..+++++.....
T Consensus       314 ~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~  369 (383)
T COG0075         314 RRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVE  369 (383)
T ss_pred             HHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCccc
Confidence            447888889999998877677899999766 7889999999999999999865433

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.96  E-value=1.1e-26  Score=217.63  Aligned_cols=315  Identities=16%  Similarity=0.137  Sum_probs=222.9

Q ss_pred             CcHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc------cCCCEE
Q 015890           44 PPKMAMEKVKELVWDP-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC------DAGDSV  116 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~------~~gd~V  116 (398)
                      +.|.+.+++...+... ....+  ..+..++.+.+.+.+++++|.++.++++++|+++++..++.++.      ++||+|
T Consensus        32 ~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v  109 (373)
T TIGR03812        32 PHPIAVKAYDMFIETNLGDPGL--FPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNI  109 (373)
T ss_pred             chHHHHHHHHHHhhcCCCCccc--CccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEE
Confidence            4566677776664331 11111  13445666777777777778888888999999999988877664      367899


Q ss_pred             EEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       117 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      +++.++|+++...++..|++++.+ +.+. ++.+|++++++.+++++  ..+++..|+||||.+.+   +++|.++|+++
T Consensus       110 l~~~~~h~~~~~~~~~~G~~~~~v-~~~~-~~~~d~~~l~~~l~~~~--~~vv~~~~~~~tG~~~~---~~~i~~l~~~~  182 (373)
T TIGR03812       110 IVPESAHFSFEKAAEMLGLELRYA-PLDE-DYTVDVKDVEDLIDDNT--IGIVGIAGTTELGQIDD---IEELSKIALEN  182 (373)
T ss_pred             EECCcchHHHHHHHHHcCCeEEEE-eeCC-CCCcCHHHHHHHHhhCc--EEEEEECCCCCCCccCC---HHHHHHHHHHc
Confidence            999999999999999999999988 7654 45789999999998765  44444458999999999   89999999999


Q ss_pred             CCEEEEeece--e--ccC--CC---ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC----
Q 015890          197 GSWLVVDNTY--F--MYD--GR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP----  263 (398)
Q Consensus       197 ~~~livDe~~--~--~~~--~~---~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~----  263 (398)
                      |+++|+|++|  +  .+.  +.   .......+-..+..|.+| +++++.++|+++..+  +++++.+........    
T Consensus       183 ~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~--~~~~~~l~~~~~~~~~~~~  259 (373)
T TIGR03812       183 GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK-MGLSPIPAGGILFRS--KSYLKYLSVDAPYLTVKKQ  259 (373)
T ss_pred             CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccc-cCCCcCCceEEEEeC--HHHHhhhcccCcccCCCCC
Confidence            9999999999  2  111  00   111111122355678889 555677888666443  667666532111111    


Q ss_pred             ----CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890          264 ----ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL  338 (398)
Q Consensus       264 ----~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  338 (398)
                          .+.+.....++..+++. ....+++..+++.++++++++.|++++...+..+. .+++.+.++.    ..++.++|
T Consensus       260 ~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~v~~~~~~----~~~v~~~L  334 (373)
T TIGR03812       260 ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPV-LNIVAFEVDD----PEEVRKKL  334 (373)
T ss_pred             cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCC-ceEEEEEeCC----HHHHHHHH
Confidence                23445566666677764 23556788899999999999999988764444444 6777777652    45777777


Q ss_pred             HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          339 AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       339 l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      . ++||.++++.   .++++|++++. .+++|+++++++|++
T Consensus       335 ~-~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       335 R-DRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             H-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence            5 7899997753   46789999987 689999999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.96  E-value=9.2e-28  Score=222.51  Aligned_cols=302  Identities=17%  Similarity=0.166  Sum_probs=220.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc------------
Q 015890           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD------------  111 (398)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~------------  111 (398)
                      ..+.+.+...+ +.....|...++..++++++++++.+++|.+  ..++++|+|+|+++..++.+++.            
T Consensus        13 ~~~~~~~~~~~-n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~   91 (345)
T cd06450          13 ALLLEMLTSAK-NAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR   91 (345)
T ss_pred             HHHHHHHHHhc-CCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence            34444454444 4335568888899999999999999998875  45799999999999999998753            


Q ss_pred             CC--CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHH
Q 015890          112 AG--DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       112 ~g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                      ++  +.|+++.++|..+...++..|.+++.+ +.++++ .+|+++|++.+++    +..+++|++++++||||.+.+   
T Consensus        92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---  166 (345)
T cd06450          92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLV-PVDEDG-RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---  166 (345)
T ss_pred             ccCCeEEEEcCcchhHHHHHHHHHhcCeEEe-eeCCCC-CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---
Confidence            23  478889999999888888889999999 877654 7899999999975    112488889999999999988   


Q ss_pred             HHHHHHHHHHcCCEEEEeece--eccCCC--cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          186 LKRISDLCKAAGSWLVVDNTY--FMYDGR--KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~--~~~~~~--~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      +++|+++|+++|+++++|++|  +.....  ...... .+.+.+..|++|+++ ++.++|+++.+               
T Consensus       167 ~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~---------------  230 (345)
T cd06450         167 LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR---------------  230 (345)
T ss_pred             HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH---------------
Confidence            999999999999999999999  222111  110011 123466789999875 55677776533               


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---CCChHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRW  337 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  337 (398)
                             ...+.++...+.  ...++++.++..++++++.+.|++++.+.+..+...+++.+.++..   ..+..++.++
T Consensus       231 -------~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~  301 (345)
T cd06450         231 -------ALKLWATLRRFG--RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDR  301 (345)
T ss_pred             -------HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHH
Confidence                   333444444443  3556788888888999999999988765655443366666666542   1235677777


Q ss_pred             HHHhcCeEEecCCCCCCCCeEEEEecC-C-CHHHHHHHHHHHHH
Q 015890          338 LAHRHGVVVIPGGACGCRGHLRISFGG-L-VEDDCKAAADRLRR  379 (398)
Q Consensus       338 ll~~~gi~v~~g~~~~~~~~iRi~~~~-~-~~~~~~~~~~~l~~  379 (398)
                      |. ++|+.+.++..+...+++|++++. . +.+|++++++.|.+
T Consensus       302 L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         302 LN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             HH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence            75 776666555544456789999987 3 88999999998875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.96  E-value=1.1e-26  Score=218.73  Aligned_cols=342  Identities=16%  Similarity=0.150  Sum_probs=232.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ .+|++.+|+.+++.+..  .+... ...+....+++.+.+..+  .+.+++++|+++|++
T Consensus        36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e  110 (406)
T PRK12381         36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFW--HTGNG-YTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE  110 (406)
T ss_pred             CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcc--cccCc-cCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHH
Confidence            4688899998752  3332 48999999999986521  11111 112333455555554433  468999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCC---CCCCChHHHHHhhccCCCCeEEE
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK---TLHPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~---~~~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      .+++....        +..+|+..+++|++....+...+.....   +.+....   -...|++.+++.++++  +++|+
T Consensus       111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi  188 (406)
T PRK12381        111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQ--TCAVI  188 (406)
T ss_pred             HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCC--eeEEE
Confidence            99998631        3468999999999977544333321110   0011110   1124789999999754  47888


Q ss_pred             EeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          170 VVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       170 i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      ++ |.+++|-+.  +.+.+++|.++|++||+++|+||+|  +++.|........+....+.|++|.++ +|+++||++.+
T Consensus       189 iE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~-gG~~ig~~~~~  266 (406)
T PRK12381        189 VE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG-GGFPIGAMLTT  266 (406)
T ss_pred             Ee-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh-CCCceEEEEEc
Confidence            75 778877643  7899999999999999999999999  666554322111111122459999998 89999999999


Q ss_pred             CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccccCCccEEEE
Q 015890          246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVKGGEGAIYLW  321 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~  321 (398)
                         +++++.+.......+++.++..++++.++|+...  ..+..++++++.+++.+.|++++    .+...... +.+++
T Consensus       267 ---~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-Gl~~~  340 (406)
T PRK12381        267 ---EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGL-GLLIG  340 (406)
T ss_pred             ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecC-eEEEE
Confidence               7888877655555567788999999888876421  22455666677777777776542    11112233 67778


Q ss_pred             eeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccc
Q 015890          322 ARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       322 ~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                      +.+++.. .....+...+ .++||.+.+.    .++.+|++++. .+++++++++++|.++++++.+++
T Consensus       341 ~~l~~~~~~~~~~~~~~l-~~~Gv~v~~~----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~  404 (406)
T PRK12381        341 CVLNAEYAGKAKQISQEA-AKAGVMVLIA----GPNVVRFAPALNISEEEITTGLDRFARACERFVSRG  404 (406)
T ss_pred             EEecCchhhHHHHHHHHH-HHCCcEEeeC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            8876421 1234566655 5899999764    35789999887 799999999999999999887654

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.96  E-value=4.1e-27  Score=222.18  Aligned_cols=334  Identities=14%  Similarity=0.133  Sum_probs=225.4

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.....   .+|.+.+++.+++.+......   ....+....+++.+.+..+  .+.+++++|+++|+.
T Consensus        38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e  112 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR---AFRNDQLAPLYEELAALTG--SHKVLPMNSGAEAVE  112 (401)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc---ccCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence            46788999987754333   389999999999876322111   1112334444455544444  357999999999999


Q ss_pred             HHHHHhcc---------CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhccCCCCeE
Q 015890          104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKL  167 (398)
Q Consensus       104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~~~~~~~  167 (398)
                      .+++.+..         +| ++|++...+|++....+...+.....   +.+....-   ...|++.+++.+.+++  ++
T Consensus       113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~a  190 (401)
T PRK00854        113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNT--VA  190 (401)
T ss_pred             HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCe--EE
Confidence            99998852         23 68999999998876444333321111   10000000   0137899999998654  99


Q ss_pred             EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeE
Q 015890          168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       168 v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                      |++++|+||+|.+.+ ++++++|.++|++||+++|+||+|  +++.|.....    ..++  +++  ++|+++.+.+|+|
T Consensus       191 ii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D--~~~--~~K~l~gg~~~ig  266 (401)
T PRK00854        191 FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD--VTL--IGKALSGGFYPVS  266 (401)
T ss_pred             EEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCC--EEE--ecccccCCccCeE
Confidence            999999999999887 456999999999999999999999  5555422111    1122  332  3699973337999


Q ss_pred             EEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc--ccCCccE
Q 015890          241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI  318 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~  318 (398)
                      +++++   +++++.+.......+++.+++.++++.++|+...+  ....+.++++.+++.+.|++++...+  ..+. +.
T Consensus       267 ~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~-g~  340 (401)
T PRK00854        267 AVLSN---SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGR-GL  340 (401)
T ss_pred             EEEEc---HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEecc-ce
Confidence            99999   78888776544555667789999999998875211  23456677777888888876543212  2344 44


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      ++.+.+.....+..++++.|+ ++||.+.+.    ..+++|++++. .+++++++++++|.+++.
T Consensus       341 ~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        341 MLAVELEPEAGGARQYCEALK-ERGLLAKDT----HDHTIRLAPPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             EEEEEEecCchhHHHHHHHHH-HCCeEEecC----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence            444444322224667888886 689999753    35799999875 799999999999998764

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=6.7e-27  Score=218.52  Aligned_cols=333  Identities=14%  Similarity=0.127  Sum_probs=234.3

Q ss_pred             HcCCCeEEcCCc--cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      .+|+.++||..|  ...++.+|++++++.+++...  ..+ +.....++++.+++.+..   .....+++++|+++++..
T Consensus        26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~---~~~~~~~~~~SGseA~~~   99 (375)
T PRK04260         26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIG---DKDYLAFFCNSGAEANEA   99 (375)
T ss_pred             CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhc---CcCCEEEEcCccHHHHHH
Confidence            468889999876  345667899999999998652  222 233446678888887642   112246889999999999


Q ss_pred             HHHHhc--cCCCEEEEeCCCCcChhh-HHHhcCcEEE--Eec-cCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          105 IVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTGVTHI--LVG-PCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       105 ~~~~l~--~~gd~Vl~~~p~~~~~~~-~~~~~g~~~~--~~~-~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      +++...  .++++|++.+.+|++... .+...|.+..  .+. ...  ......|++.+++.++++  +++|++++++|+
T Consensus       100 Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~--~a~vi~e~v~~~  177 (375)
T PRK04260        100 AIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKN--TAAVMLELVQGE  177 (375)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCC--eEEEEECCeECC
Confidence            988864  345789999999987542 2222222110  000 000  000123889999988654  489999999999


Q ss_pred             CccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          177 SGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       177 tG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      +|.+. +.+.++++.++|+++|+++|+||+|  +...+........+....+.|+||.++ +|+|+||++++   +++.+
T Consensus       178 ~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~---~~~~~  253 (375)
T PRK04260        178 SGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA-NGVPVGAMLAK---SSLGG  253 (375)
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc-CCcceEEEEEc---HHHHh
Confidence            99975 5678999999999999999999999  555543222111111111448999998 89999999999   78877


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      .+.......+++.+++.++++.++|+..  +++.++.++.....++.+.+.+.+.+.+..... .++++|++++.   +.
T Consensus       254 ~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~---~~  329 (375)
T PRK04260        254 AFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTA---DL  329 (375)
T ss_pred             hcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecC---cH
Confidence            7765444556777899999999999652  245566667777777788887776654333333 48999999853   45


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .++.+++. ++||.+.|.    ..+.+|++++. .+++++++++++|.++
T Consensus       330 ~~~~~~l~-~~Gi~v~~~----~~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        330 SQLVEAAR-DKGLIVLTA----GTNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             HHHHHHHH-hCCCEEecC----CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            67777775 899999875    34789999966 8899999999999765

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.96  E-value=1.1e-26  Score=222.27  Aligned_cols=341  Identities=17%  Similarity=0.175  Sum_probs=232.0

Q ss_pred             hHHHHHHHHHHcC----CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-C-CCcHHHHHHHH---HHHhhhcCC
Q 015890           17 PIMVQIQELVRGA----KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-D-EGLPELRDALV---KKLNQENKL   87 (398)
Q Consensus        17 ~~~~~~~~~~~~g----~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~-~~~~~~~~~l~---~~l~~~~~~   87 (398)
                      +.++++.+.....    .....++.|.++...|..+.++.....   ....|.+ . ......++.+.   +++.+++|+
T Consensus        51 ~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~  127 (447)
T PRK00451         51 ELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTGM  127 (447)
T ss_pred             HHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC
Confidence            4555565555332    156678888888877777666553321   1223433 0 11233555555   556888899


Q ss_pred             CCCcEEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890           88 YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus        88 ~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                      +.+++.+++|+++++..++.++. .+||+|+++.+.|+.+...++.    .|.+++.+ +.+++  .+|++++++.++++
T Consensus       128 ~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~--~~d~~~l~~~i~~~  204 (447)
T PRK00451        128 DVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV-PYEDG--VTDLEALEAAVDDD  204 (447)
T ss_pred             CcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe-cCCCC--CCCHHHHHHhcCCC
Confidence            88899999999999999988875 7899999999999888776654    68999999 77654  78999999999876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE--eeceeccCCCccccccCCcEEEEc---ccccccCCCcc
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYFMYDGRKHCCVEGDHVVNLF---SFSKAYGMMGW  237 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv--De~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~  237 (398)
                      +  ++|++++| |+||.+.+   +++|+++|+++|+++++  |.+.++.-.   .....+.+++++   +++|.++++|+
T Consensus       205 t--~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~---~~~~~~~D~~~~s~~k~~~~~~~~Gp  275 (447)
T PRK00451        205 T--AAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK---PPGEYGADIVVGEGQPLGIPLSFGGP  275 (447)
T ss_pred             e--EEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC---CcccCCCCEEEECCCcCCCCCCCCCC
Confidence            5  99999998 89999988   99999999999999998  543322111   111223445555   56666667788


Q ss_pred             eeEEEEccCCcHHHHHHHH----------------------------HhhccCCCCcchHHH-HHHHHHhc-CCchHHHH
Q 015890          238 RVGYIAYPSEVEGFATQLL----------------------------KVQDNIPICASIISQ-HLALYSLQ-TGPEWVTE  287 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~~-~~~~~~l~-~~~~~~~~  287 (398)
                      ++||++++   +++++.+.                            ........+.+...+ .++..+++ ..+..+++
T Consensus       276 g~G~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~  352 (447)
T PRK00451        276 YLGFFATR---KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRE  352 (447)
T ss_pred             CchHHHhh---HHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHH
Confidence            99999988   67766631                            111111112222222 22222333 23466888


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCccccCCccEEE--EeeCCCCCCChHHHHHHHHHhcCeEE-ecCCCCC--CCCeEEEEe
Q 015890          288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVV-IPGGACG--CRGHLRISF  362 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~~--~~~~iRi~~  362 (398)
                      ..+++.++++++.+.|++++++.+.  .+.+|.  .++++   .+..++.++|+ ++||.+ .++..+.  ..+++|+++
T Consensus       353 ~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~---~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~  426 (447)
T PRK00451        353 LAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLP---KPAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCV  426 (447)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecC---CCHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEec
Confidence            8999999999999999988765665  224443  35553   24678888886 667663 3444332  247899999


Q ss_pred             cC-CCHHHHHHHHHHHHHHH
Q 015890          363 GG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       363 ~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +. .++++++++++.|.+.+
T Consensus       427 ~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        427 TEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             CCCCCHHHHHHHHHHHHHHh
Confidence            85 78999999999998653

>PRK07049 methionine gamma-lyase; Validated

Probab=99.96  E-value=9.8e-27  Score=218.72  Aligned_cols=289  Identities=17%  Similarity=0.154  Sum_probs=205.5

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+....+++.++++.    +  .+++++++|+++++..++.+++++||+|+++.|.|.++...+    +..|++++.+ 
T Consensus        81 ~~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~-  153 (427)
T PRK07049         81 NHPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGF-  153 (427)
T ss_pred             CCcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEE-
Confidence            4555677888888875    3  456888899999999999999999999999999999987653    5679887777 


Q ss_pred             cCCCCCCCCChHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEeeceeccCCCccc
Q 015890          142 PCSSKTLHPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA---AGSWLVVDNTYFMYDGRKHC  215 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~---~~~~livDe~~~~~~~~~~~  215 (398)
                      +.   +  .|.+.+++.+++   ...+++|++++|+||||.+++.+++.+|++.|+.   +++++|+|++|.......  
T Consensus       154 ~~---~--~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~--  226 (427)
T PRK07049        154 AD---G--LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK--  226 (427)
T ss_pred             eC---C--CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC--
Confidence            41   1  367777776642   1235999999999999999997777777776543   789999999982211111  


Q ss_pred             cccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890          216 CVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  294 (398)
Q Consensus       216 ~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  294 (398)
                      ....+.++++.|+||.+| .+|+|+||++.+   +++++.+.........+.+++.++++...++.    +..+.++..+
T Consensus       227 pl~~g~divv~S~SK~~gG~~glr~G~vv~~---~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t----l~~R~~~~~~  299 (427)
T PRK07049        227 PLEHGADLSVYSLTKYVGGHSDLVAGAVLGR---KALIRQVRALRSAIGTQLDPHSCWMLGRSLET----LVLRMERANR  299 (427)
T ss_pred             ccccCCCEEEEcCceeecCCCCcEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh----HHHHHHHHHH
Confidence            112345688999999998 589999999988   78888888877766777888888888777764    5566677788


Q ss_pred             HHHHHHHHhccCCCC-ccccCC------------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC
Q 015890          295 NREIIREALSPLGEG-AVKGGE------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC  352 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~  352 (398)
                      ++..+.+.|++++.+ +|..|.                  .+..+.+.+..    ..+...+++++-.+..   .-|...
T Consensus       300 ~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~l~~~~~slG~~~  375 (427)
T PRK07049        300 NARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG----GQAAAFRFLNALQIFKLAVSLGGTE  375 (427)
T ss_pred             HHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC----CHHHHHHHHHcCcccEEcccCCCCC
Confidence            999999999987652 333221                  13345556542    2233334444444333   111110


Q ss_pred             ----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          353 ----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       353 ----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                                            + .++.||+|++-   |+.+.+++.|.+++.
T Consensus       376 sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  425 (427)
T PRK07049        376 SLASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALD  425 (427)
T ss_pred             ceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence                                  0 13579999997   677788888888875

>PRK14012 cysteine desulfurase; Provisional

Probab=99.96  E-value=2.3e-26  Score=217.03  Aligned_cols=331  Identities=15%  Similarity=0.116  Sum_probs=222.6

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhc--CCCCCCC--CCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVW--DPSISKY--GADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~--~~~~~~y--~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      +.|+.+... ++|+.+++++.+++.  +.....+  ....+  ..+..+.+.+.+.+..+.+++++++++|+|++++.++
T Consensus         5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l   83 (404)
T PRK14012          5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI   83 (404)
T ss_pred             EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence            556665544 568899999988774  2111101  00001  0123444444555555888889999999999999998


Q ss_pred             HHhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          107 LTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       107 ~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      .++.    ++||+|+++.++|++....+   +..|++++.+ +.+++ +.+|++.|++.+++++  ++|++++++||||.
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v-~~~~~-g~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~  159 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-DPQSN-GIIDLEKLEAAMRDDT--ILVSIMHVNNEIGV  159 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE-ccCCC-CcCCHHHHHHhcCCCC--EEEEEECcCCCccc
Confidence            8764    78999999999997765444   3459999988 77654 4689999999998765  89999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      +.|   +++|.++|+++|+++|+|+++ ++.......  ..+.++++.|++|.+|++  ++|+++++++   ...++.+.
T Consensus       160 ~~~---~~~I~~la~~~g~~vivD~a~~~g~~~~~~~--~~~~D~~~~s~~K~~gp~--g~G~l~~~~~---~~~~~~~~  229 (404)
T PRK14012        160 IQD---IAAIGEICRERGIIFHVDAAQSVGKVPIDLS--KLKVDLMSFSAHKIYGPK--GIGALYVRRK---PRVRLEAQ  229 (404)
T ss_pred             hhh---HHHHHHHHHHcCCEEEEEcchhcCCcccCcc--cCCCCEEEEehhhccCCC--ceEEEEEecC---CCCCCCce
Confidence            999   899999999999999999999 554322211  223447788999988733  5788887742   11122111


Q ss_pred             h-------ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-----CccEEEEeeCCC
Q 015890          259 Q-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLPE  326 (398)
Q Consensus       259 ~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----~~~~~~~~~~~~  326 (398)
                      .       .....+.+.....++.++++.......+..++.++.++++.+.|++++.+.+...     ....++++.+. 
T Consensus       230 ~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~-  308 (404)
T PRK14012        230 MHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV-  308 (404)
T ss_pred             ecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc-
Confidence            0       0112234455555555555532234555667778888889998887765444321     11234454443 


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                         +..++...|   +++.+.+|..|..                   .+.||++++. ++++|++++++.|+++++.+.
T Consensus       309 ---~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~  381 (404)
T PRK14012        309 ---EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR  381 (404)
T ss_pred             ---CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence               234555543   3777777765522                   3689999999 899999999999999988763

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.96  E-value=1.1e-26  Score=220.49  Aligned_cols=336  Identities=18%  Similarity=0.147  Sum_probs=228.9

Q ss_pred             HcCCCeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|....   -.+|.+.+++.+++.+..  .|. +..+..++++++++++.    . .+.|++++|+++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~----~-~~~v~~~~sGseA~  117 (423)
T TIGR00713        45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP----S-VEMVRFVNSGTEAT  117 (423)
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC----c-ccEEEEeCCHHHHH
Confidence            4689999999876433   268999999999998743  233 55667788888888762    1 36899999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHh---cCcEEEEeccCCC--------CCC---CCChHHHHHhhccC-CCC
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM---TGVTHILVGPCSS--------KTL---HPDADWLEKTLETK-PTP  165 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~--------~~~---~~d~e~l~~~l~~~-~~~  165 (398)
                      +.+++...  ...++|+...++|+++...+..   .+...... +...        ...   ..|++.+++.++.. .++
T Consensus       118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~  196 (423)
T TIGR00713       118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL-PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI  196 (423)
T ss_pred             HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC-CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence            99998753  2458999999999997643332   11111100 0000        000   12789999988731 235


Q ss_pred             eEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEE
Q 015890          166 KLVSVV-NPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY  241 (398)
Q Consensus       166 ~~v~i~-~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  241 (398)
                      ++|+++ .++| +|.+.+ ++++++|.++|++||+++|+||+|  +.. +........+....+.++||.++ +|+|+||
T Consensus       197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~~~~~~~~~pDi~t~sK~l~-~G~pig~  273 (423)
T TIGR00713       197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGGAQEYFGVEPDLTTLGKIIG-GGLPVGA  273 (423)
T ss_pred             EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-CcchhHHHhCCCcchhhhhhhhc-CCCceee
Confidence            888887 5666 788877 689999999999999999999999  522 21111110111112448999998 8999999


Q ss_pred             EEccCCcHHHHHHHHH---hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          242 IAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       242 i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      ++++   +++++.+..   .....+++.+++.++++.++|+..  .++.++..+...+.++.+.+.+++++......+. 
T Consensus       274 v~~~---~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~-  349 (423)
T TIGR00713       274 FGGR---REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRV-  349 (423)
T ss_pred             eeEH---HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee-
Confidence            9999   788888753   223456778999999998888752  2356666777777788888888777653333344 


Q ss_pred             cEEEEeeCCCCC---------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKH---------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       317 ~~~~~~~~~~~~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +.++.+.+....         .+   ...++..++ ++||.+.++.    .+.+|+++. .+++++++++++|.+++.+
T Consensus       350 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~l~~~-~t~~~i~~~~~~l~~~l~~  422 (423)
T TIGR00713       350 GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ----FEACFLSAA-HTEEDIENTIEAAEEVFAE  422 (423)
T ss_pred             ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC----ccceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence            333333332110         01   124666676 7899987542    246889887 4899999999999998865

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=6.2e-27  Score=217.99  Aligned_cols=317  Identities=16%  Similarity=0.097  Sum_probs=222.1

Q ss_pred             cCCccCCCCCcHHHHHHHHHhhcCCCCCC----CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-
Q 015890           35 LAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-  109 (398)
Q Consensus        35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~----y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-  109 (398)
                      |+.+.+. ++|+.+++++.+.+.......    +.......+..+.+.+.+++.++.++++|++++|+|++++.++.++ 
T Consensus         3 ld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~   81 (364)
T PLN02651          3 LDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVM   81 (364)
T ss_pred             ccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence            4444433 568999999988774321111    1011222444556666666667888889999999999988887665 


Q ss_pred             ---ccCCCEEEEeCCCCcChhhH---HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          110 ---CDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       110 ---~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                         .++||+|+++...|+++...   ++..|++++.+ +.+++ +.+|++++++.+++++  +++++++++|+||.+.| 
T Consensus        82 ~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~v~~~~n~tG~~~~-  156 (364)
T PLN02651         82 HFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYL-PVKSD-GLVDLDELAAAIRPDT--ALVSVMAVNNEIGVIQP-  156 (364)
T ss_pred             HhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEECCCCCceeccc-
Confidence               36789999999888765433   34568888888 77644 4689999999998765  99999999999999999 


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---  259 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---  259 (398)
                        +++|.++|+++|+++++|+++ ++.....  ....+.++++.|.+|++|++  .+|+++.++   +....+....   
T Consensus       157 --l~~I~~~~~~~g~~~~vD~a~~~g~~~~~--~~~~~~D~~~~s~hK~~gp~--G~g~l~v~~---~~~~~l~p~~~g~  227 (364)
T PLN02651        157 --VEEIGELCREKKVLFHTDAAQAVGKIPVD--VDDLGVDLMSISGHKIYGPK--GVGALYVRR---RPRVRLEPLMSGG  227 (364)
T ss_pred             --HHHHHHHHHHcCCEEEEEcchhhCCcccC--cccCCCCEEEechhhhCCCC--ceEEEEEcC---CCCCCCCccccCC
Confidence              899999999999999999999 5543222  22334568889999975544  478888774   2222221111   


Q ss_pred             ----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc-----cEEEEeeCCCCCC
Q 015890          260 ----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG-----AIYLWARLPEKHL  329 (398)
Q Consensus       260 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~-----~~~~~~~~~~~~~  329 (398)
                          .....+.+.+...++.++++......++..++.++..+++.+.|++ +++++++.+..     ...+.+.++.  .
T Consensus       228 ~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~--~  305 (364)
T PLN02651        228 GQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY--V  305 (364)
T ss_pred             CccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC--C
Confidence                1235577888888888888763344566778888889999998875 55556665411     2245555552  3


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCK  371 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~  371 (398)
                      +..++...|. +  |.++.|+.|..                   .+.+|+|++. +|++|++
T Consensus       306 ~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        306 EGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             CHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence            5777787763 4  99999987732                   2689999999 7777763

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.96  E-value=3.1e-26  Score=211.95  Aligned_cols=319  Identities=12%  Similarity=0.050  Sum_probs=218.9

Q ss_pred             CeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           31 NAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        31 ~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+||-....+.+   .+|+++++++.+...+     |.   +..++++++.+++++.+|.  +++++++|+|+|+..++.
T Consensus         9 ~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~   78 (363)
T TIGR01437         9 KVINASGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVA   78 (363)
T ss_pred             eEEECCcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHH
Confidence            455554433222   3799999999998643     32   3467888888888888775  478999999999999999


Q ss_pred             HhccCCC---------------EEEEeCCCCcCh----hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890          108 TLCDAGD---------------SVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       108 ~l~~~gd---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      +++++||               +|+++.|.|..+    ...+...|++++++ +.+   +.+|++++++++++++  +++
T Consensus        79 al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v-~~~---~~~d~~~le~ai~~~t--~ai  152 (363)
T TIGR01437        79 AVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEA-GYA---NECSAEQLEAAITEKT--AAI  152 (363)
T ss_pred             HHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEE-cCC---CCCCHHHHHHhcChhc--eEE
Confidence            9999888               999999777655    46678889999988 552   3589999999999876  655


Q ss_pred             E-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          169 S-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       169 ~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      + +++|+||+|.+.+   +++|+++|+++|+++|+|++| ....    .....+.+++++|.||.+  +|++.|+++.+ 
T Consensus       153 ~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~~----~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~-  222 (363)
T TIGR01437       153 LYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDLQ----KYYRLGADLVIYSGAKAI--EGPTSGLVLGK-  222 (363)
T ss_pred             EEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCchH----HHHHcCCCEEEEeCCccc--CCCceEEEEEc-
Confidence            5 6678999999999   888999999999999999999 3221    011112357788999987  47789999887 


Q ss_pred             CcHHHHHHHHHhhccCC--CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--cc-----
Q 015890          247 EVEGFATQLLKVQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GA-----  317 (398)
Q Consensus       247 ~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~-----  317 (398)
                        +++++.+........  .........++.++++.......+..+...++++.+.+.|++++++.+..+.  .+     
T Consensus       223 --~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~  300 (363)
T TIGR01437       223 --KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIAR  300 (363)
T ss_pred             --HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCce
Confidence              677776643322110  1111122233333433211112233334445666799999988775655321  11     


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcC--eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +-+.+.......+..++.+.| +++|  |.+++  .+...+.+|+++...+++|++.++++|.+.
T Consensus       301 ~~v~~~~~~~g~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       301 AEIRFDESELGMTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI  362 (363)
T ss_pred             EEEEEeccCCCCCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence            122233322234678888877 4667  66665  355678999999887889999999998765

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.96  E-value=8.1e-26  Score=212.19  Aligned_cols=339  Identities=16%  Similarity=0.143  Sum_probs=225.8

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|  ...++ .+|++.+++.+++.+..  ..+.. ...+....+++.+.+..+  .+.+++++++++|+.
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~--~~~~~-~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e  106 (397)
T TIGR03246        32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLW--HIGNG-YTNEPVLRLAKKLVDATF--ADKVFFCNSGAEANE  106 (397)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc--cccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence            468999999876  33333 58999999999987521  11111 112334455555555444  368999999999999


Q ss_pred             HHHHHhc-------cCC-CEEEEeCCCCcChhhHHHh-cCcEEEE--eccCCCC--C-CCCChHHHHHhhccCCCCeEEE
Q 015890          104 NIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQM-TGVTHIL--VGPCSSK--T-LHPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       104 ~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~-~g~~~~~--~~~~~~~--~-~~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      .+++.+.       ++| ++|+..+.+|++.....-. .+.....  +.|....  . ...|++.+++.++++  +++|+
T Consensus       107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi  184 (397)
T TIGR03246       107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDK--TCAVI  184 (397)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccC--eEEEE
Confidence            9999863       123 6789999999887543322 2211100  0011100  0 013789999999754  58999


Q ss_pred             EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       170 i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      ++.++++.|... +++.+++|.++|++||+++|+||+|  +++.|........+....+.+++|.++ +|+++||++++ 
T Consensus       185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lg-gG~pigav~~~-  262 (397)
T TIGR03246       185 VEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALG-GGFPIGAMLTT-  262 (397)
T ss_pred             EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhh-CCcceeEEEEc-
Confidence            997677777654 7899999999999999999999999  655554322211122233448899998 89999999999 


Q ss_pred             CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccccCCccEEEEe
Q 015890          247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVKGGEGAIYLWA  322 (398)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~  322 (398)
                        +++++.+.......+++.+++.++++.++|+...  .++..++++++.+++.+.|++++    .+....+. +.++.+
T Consensus       263 --~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i  337 (397)
T TIGR03246       263 --TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGA  337 (397)
T ss_pred             --HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEE
Confidence              7888777654444567778888888888887521  13445666666666766665533    22223344 455555


Q ss_pred             eCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       323 ~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+.... .....++..|+ ++||.+.+.    .++++|++++. .+++++++++++|.+++.++
T Consensus       338 ~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       338 VLTEAYQGKAKQFVNAAA-EEGVIALIA----GPNVVRFAPSLVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             EEcCchhhHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            553211 13556777665 789998764    24789998766 79999999999999988764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.96  E-value=2.2e-26  Score=217.32  Aligned_cols=345  Identities=12%  Similarity=0.034  Sum_probs=228.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.....+.  ....+.+..+++.+.+..+. ..+.+++++++++|+
T Consensus        30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  107 (420)
T TIGR00700        30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM--VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAV  107 (420)
T ss_pred             CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc--ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            4789999998874  3333 5899999999998764222221  11123344556655554432 235799999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCC-CC---------CCCChHHHH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS-KT---------LHPDADWLE  156 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~---------~~~d~e~l~  156 (398)
                      +.+++...  ....+|+....+|++....+... +-             .+..+ +.+. ..         +.-+++.++
T Consensus       108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  186 (420)
T TIGR00700       108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRA-PLPYPYRDGLLDKQLSTDGELAAAR  186 (420)
T ss_pred             HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccchhHHHHHHHHH
Confidence            99998764  22357999999999976543322 10             11112 1110 00         000245666


Q ss_pred             Hhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890          157 KTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK  230 (398)
Q Consensus       157 ~~l~---~~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK  230 (398)
                      +.+.   ....+++|+++..+..+|..+ +++.+++|.++|++||+++|+||+|  +.+.+........+....+.++||
T Consensus       187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK  266 (420)
T TIGR00700       187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAK  266 (420)
T ss_pred             HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeec
Confidence            6653   233478999987788888865 5556999999999999999999999  766664322222222333557999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      .++ +|+|+||++++   +++++.+.......+++.++++++++.++|+. . ....+...+...+.++.+.+..++++.
T Consensus       267 ~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~  342 (420)
T TIGR00700       267 SLA-DGLPLSGVTGR---AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPR  342 (420)
T ss_pred             ccc-CCcceEEEEec---HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            998 99999999999   78888776555566788899999999888764 1 233333333444445555555555665


Q ss_pred             CccccCCccEEEEeeCCCCC--CC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKH--LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +..+.+. |.++++.+.+..  ..    ...+...+ .++||.+.|+..|  .++||++++. .+++++++++++|.+++
T Consensus       343 ~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l  418 (420)
T TIGR00700       343 IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAIL  418 (420)
T ss_pred             EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence            4455566 777777763210  01    23344444 4899999998755  3789999876 78999999999999887


Q ss_pred             H
Q 015890          382 E  382 (398)
Q Consensus       382 ~  382 (398)
                      +
T Consensus       419 ~  419 (420)
T TIGR00700       419 A  419 (420)
T ss_pred             h
Confidence            4

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN00144 acetylornithine transaminase

Probab=99.96  E-value=3.2e-26  Score=213.18  Aligned_cols=340  Identities=16%  Similarity=0.125  Sum_probs=231.7

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+..  .+ ......+....+++.+.+..+  .+.+++++++++|++
T Consensus        12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~-~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e   86 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA--HV-SNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANE   86 (382)
T ss_pred             CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC--Cc-cccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHH
Confidence            4789999998764  3333 58999999999987632  11 111123445566666655433  468999999999999


Q ss_pred             HHHHHhcc---C------------CCEEEEeCCCCcChhhHHHhcCcEEE---EeccCCCCC---CCCChHHHHHhhccC
Q 015890          104 NIVLTLCD---A------------GDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSKT---LHPDADWLEKTLETK  162 (398)
Q Consensus       104 ~~~~~l~~---~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~~~---~~~d~e~l~~~l~~~  162 (398)
                      .+++....   .            ..+|+....+|++....+........   .+.+.....   ...|++.+++.+..+
T Consensus        87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~  166 (382)
T PLN00144         87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG  166 (382)
T ss_pred             HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence            99997531   0            24799999999997755443322110   000111100   012789999888654


Q ss_pred             CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee
Q 015890          163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV  239 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  239 (398)
                      . +++|+++..+||.|.. ++.+.+++|.++|++||+++|+||+|  +++.+........+....+.+++|.++ +|+|+
T Consensus       167 ~-~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~-~G~pi  244 (382)
T PLN00144        167 K-TAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLA-GGLPI  244 (382)
T ss_pred             C-eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEeccccc-CCcce
Confidence            3 7888888668995553 35666999999999999999999999  666664322111111122668999997 89999


Q ss_pred             EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          240 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       240 G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      ||++.+   +++.+.+.......+++.++..++++.+.|+..  .+..++..+.-+..++.+.+.+.+.+.+.-+.. .|
T Consensus       245 g~v~~~---~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G  320 (382)
T PLN00144        245 GAVLVT---EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VG  320 (382)
T ss_pred             EEEEEc---HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeec-Cc
Confidence            999999   788887765555567788999999999666542  233333333333345566666666654323334 48


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++|+.+..   ....++..+. ++||.+.|+.   ..+.||++++. ++++++++++++|.+++.++
T Consensus       321 ~~~~l~l~~---~~~~~~~~~~-~~Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~  381 (382)
T PLN00144        321 LLVGIQLDV---PAGPLVDACR-DSGLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILADCLPAL  381 (382)
T ss_pred             eEEEEEecC---ccHHHHHHHH-HCCeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence            999999842   3456777664 8999998863   24889999998 89999999999999998754

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.96  E-value=5.1e-26  Score=214.34  Aligned_cols=344  Identities=13%  Similarity=0.113  Sum_probs=228.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+.....+  .....+....+++.+.+..+. ..+.+++++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~  114 (421)
T PRK09792         37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY--QIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAV  114 (421)
T ss_pred             CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc--CccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHH
Confidence            4789999998764  3233 589999999999876322112  112234445666666554432 235789999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCC--CCCCC--CChHHHHHhhcc-
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS--SKTLH--PDADWLEKTLET-  161 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~~~~--~d~e~l~~~l~~-  161 (398)
                      +.+++...  ....+|+....+|++....+... |.             .+..+ |.+  ..+..  -+++.+++.++. 
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~~~~~~~l~~~~~~~  193 (421)
T PRK09792        115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHV-PYPSDLHGISTQDSLDAIERLFKSD  193 (421)
T ss_pred             HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHhc
Confidence            99999865  22358999999999876433222 11             11222 221  11110  134778888762 


Q ss_pred             --CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          162 --KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       162 --~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                        ...+++|+++..++++|... |++.+++|.++|++||+++|+||++  +++.|........+....+.+++|.++ +|
T Consensus       194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~-~G  272 (421)
T PRK09792        194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLA-GG  272 (421)
T ss_pred             cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhc-CC
Confidence              23478999997799999865 8999999999999999999999999  766664332221112223568999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +++||++++   +++.+.+.......+++.++..++++.+.++..  .+.+++..+.-.+..+.+.+..++.+.+  ...
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v--~~v  347 (421)
T PRK09792        273 MPLSGVVGN---ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAI--AAV  347 (421)
T ss_pred             CceEEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCc--cee
Confidence            999999998   788877755555567788999999777777642  2333333333333344444443445542  334


Q ss_pred             Cc-cEEEEeeCCCCC------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          315 EG-AIYLWARLPEKH------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       315 ~~-~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      .+ |.++++.+++..      .....++..++ ++||.+.+...  ..+.||+.++. ++++++++++++|.+++.
T Consensus       348 rG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        348 RGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             cccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence            44 899999986431      12345666665 79999964221  25789999888 899999999999998874

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.96  E-value=1.1e-25  Score=212.68  Aligned_cols=354  Identities=14%  Similarity=0.112  Sum_probs=231.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+..  .+.......+.+..+++.|....+..-+.++++++|++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve  115 (443)
T PRK08360         38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDAND  115 (443)
T ss_pred             CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHH
Confidence            4689999998873  4443 58999999999987632  22222222345566677666655433357999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cCc------------EEEEeccCCCC-C--CC--------CChHHHHH
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK-T--LH--------PDADWLEK  157 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~-~--~~--------~d~e~l~~  157 (398)
                      .+++...  ....+|+....+|++....+-. .|.            .+..+ +.+.. .  +.        .+++.+++
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (443)
T PRK08360        116 GAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYI-PYPDCYRCPFGKEPGSCKMECVEYIKE  194 (443)
T ss_pred             HHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEE-eCCccccccccCchhhhHHHHHHHHHH
Confidence            9999764  2336888899999886533222 121            11222 11110 0  00        12455666


Q ss_pred             hhcc---CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890          158 TLET---KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       158 ~l~~---~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~  231 (398)
                      .++.   ..++++|+++..+||+|.+++ +++++++.++|++||+++|+||+|  +++.|........+....+.++||.
T Consensus       195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~  274 (443)
T PRK08360        195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKP  274 (443)
T ss_pred             HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEeccc
Confidence            6642   234789999877899999776 568999999999999999999999  6666643221111111112377999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      ++ +|+|+||++++   +++++.+.......+++.++..++++.++|+..  .+..++..+.....++.+.+...+.+.+
T Consensus       275 l~-~G~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v  350 (443)
T PRK08360        275 LG-GGLPISATIGR---AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELI  350 (443)
T ss_pred             cc-CCceeEEEEEc---HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            98 89999999998   788888765545567778888898988888752  2333333444444445554444445543


Q ss_pred             ccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ....+. +.++.+.+....       .....+...++ ++||.+.+.    ..+.+|++++. .+++++++++++|.+++
T Consensus       351 ~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lr~~P~l~~t~~~id~~~~~l~~~l  424 (443)
T PRK08360        351 GDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF----SGNVLRIQPPLTIEKEVLDEGLDILEEAI  424 (443)
T ss_pred             eeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            334455 666666663211       01235566654 899998653    24789998777 79999999999999999


Q ss_pred             HHHhccccccccc
Q 015890          382 EELVKDGMVQEHV  394 (398)
Q Consensus       382 ~~~~~~~~~~~~~  394 (398)
                      .++.+ +++-+++
T Consensus       425 ~~~~~-~~~~~~~  436 (443)
T PRK08360        425 EDVEE-GKVPDEV  436 (443)
T ss_pred             HHHHh-ccCCHHH
Confidence            98754 4554444

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.96  E-value=1e-25  Score=214.43  Aligned_cols=352  Identities=13%  Similarity=0.104  Sum_probs=225.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ -+|.+.+++.+++.+....  .......+.+..+++.+....+... +.++++++|++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~  128 (451)
T PRK06918         51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAV  128 (451)
T ss_pred             CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHH
Confidence            4688899998775  2333 5899999999998763211  1111123455666666665544222 5899999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC-C--CCCCC--------hHHH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-K--TLHPD--------ADWL  155 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-~--~~~~d--------~e~l  155 (398)
                      +.+++...  ....+|+....+|++....+.....              .+..+ |.+. .  .....        ++.+
T Consensus       129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  207 (451)
T PRK06918        129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKA-PFPYEYRRPEGLTEEQYDDFMIEEF  207 (451)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEc-CCCccccccccCchHHHHHHHHHHH
Confidence            99999764  2336799999999997754433211              11112 1110 0  00000        1234


Q ss_pred             HHhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890          156 EKTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS  229 (398)
Q Consensus       156 ~~~l~---~~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s  229 (398)
                      ++.+.   ....+.+|+++..+...|.++ +.+.+++|.++|++||+++|.||+|  +.+.+........+....+.|+|
T Consensus       208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~s  287 (451)
T PRK06918        208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVS  287 (451)
T ss_pred             HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeee
Confidence            43331   122367888886666667754 5666999999999999999999999  66666433222222222355899


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-chHHHHHH-HHHHHHHHHHHHHhccCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERV-KDLVRNREIIREALSPLG  307 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~l~~~l~~~~  307 (398)
                      |.++ +|+|+||++++   +++++.+.......+++.++..++++.+.++.. ++.+.+.. +.-...++.+.+..++++
T Consensus       288 K~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~  363 (451)
T PRK06918        288 KSLG-AGVPISGVIGR---KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN  363 (451)
T ss_pred             hhhc-CCCccEEEEEc---HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            9998 89999999999   788887765555667888999999988888642 12222222 222333444444444454


Q ss_pred             CCccccCCccEEEEeeCCCC--CC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEK--HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .+..+.+.|.++.|....+.  ..    ....+...+ .++||.+.++..|  .+++|++++. .+++++++++++|.++
T Consensus       364 ~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~~~  440 (451)
T PRK06918        364 CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIEES  440 (451)
T ss_pred             CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHHHH
Confidence            43344566566655443110  01    123344444 5899999997654  3789999976 7899999999999999


Q ss_pred             HHHHhccc
Q 015890          381 LEELVKDG  388 (398)
Q Consensus       381 ~~~~~~~~  388 (398)
                      ++++.++.
T Consensus       441 l~~~~~~~  448 (451)
T PRK06918        441 LQACYEKA  448 (451)
T ss_pred             HHHHHHhh
Confidence            99886654

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.96  E-value=5.2e-26  Score=212.46  Aligned_cols=331  Identities=14%  Similarity=0.122  Sum_probs=218.6

Q ss_pred             EcCCcc-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           34 SLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        34 ~l~~g~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      +|+.++ -.+..+|++.+++.+++.+..      ...|+......++++++++++    +. .+.+++++|. .++..++
T Consensus         2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~-e~al~~~sG~-~a~~~~i   75 (392)
T PLN03227          2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GT-ESAILYSDGA-STTSSTV   75 (392)
T ss_pred             CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CC-CcEEEecCcH-HHHHHHH
Confidence            344443 233468899999888876511      223555556677888888877    43 2455555555 5556888


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc---------CCCCeEEEEeCCCCCC
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---------KPTPKLVSVVNPGNPS  177 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---------~~~~~~v~i~~p~npt  177 (398)
                      .+++++||.|+++++.|.+....++..+.+++.+ +..+.   -+++.+.+.++.         .+.+++|++++++||+
T Consensus        76 ~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~-~~~d~---~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~  151 (392)
T PLN03227         76 AAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWF-RHNDM---KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNT  151 (392)
T ss_pred             HHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEe-CCCCH---HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCC
Confidence            8899999999999999999888777777777766 32210   133443334431         1235889999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC---cccc---c--cCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR---KHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~---~~~~---~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      |.+.|   ++++.++|++||+++|+||+| ++..|.   ....   .  ..+.++++.|+||.+|+.   .|+++++   
T Consensus       152 G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v~~~---  222 (392)
T PLN03227        152 GTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMTVGS---  222 (392)
T ss_pred             CcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEEecC---
Confidence            99999   889999999999999999999 554332   1110   0  123478899999988644   4888888   


Q ss_pred             HHHHHHHHHhhccCCCCc--chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc---------ccCCcc
Q 015890          249 EGFATQLLKVQDNIPICA--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV---------KGGEGA  317 (398)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------~~~~~~  317 (398)
                      +++++.+........++.  +++.++++.+++..... .++..++++++.+++++.|++.+...+         .....+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~  301 (392)
T PLN03227        223 EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPIS  301 (392)
T ss_pred             HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCC
Confidence            777776654433333443  35566666666643111 245666778888888888864322111         111225


Q ss_pred             EEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCC-------CCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGG-------ACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       318 ~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~-------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +++.+.+......        ..++++.++ ++|+.+.+..       .+..+..||++++. .+++|+++++++|++++
T Consensus       302 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~  380 (392)
T PLN03227        302 PIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAV  380 (392)
T ss_pred             CEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence            6666776431100        136666665 8899996532       12346789999999 89999999999999999


Q ss_pred             HHHh
Q 015890          382 EELV  385 (398)
Q Consensus       382 ~~~~  385 (398)
                      +++.
T Consensus       381 ~~~~  384 (392)
T PLN03227        381 EAIL  384 (392)
T ss_pred             HHHH
Confidence            8875

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.96  E-value=5.3e-26  Score=212.80  Aligned_cols=287  Identities=20%  Similarity=0.206  Sum_probs=202.9

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  141 (398)
                      +.+...+++++++++.+    .  +++++++|+++|+..++.+++++||+|+++.|.|.....    .++..|++++.+ 
T Consensus        62 ~~p~~~~Le~~iA~~~g----~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-  134 (400)
T PRK06234         62 GNPTSTEVENKLALLEG----G--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV-  134 (400)
T ss_pred             CCccHHHHHHHHHHHhC----C--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEE-
Confidence            67888999999999873    2  467888889999999999999999999999999976443    346789999888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEeece-eccCCCcccccc
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTY-FMYDGRKHCCVE  218 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~--~~~livDe~~-~~~~~~~~~~~~  218 (398)
                      +..      |++++++.+++++  ++|++++|+||||.+.+   +++|.++|+++  |+++|+|++| .++...+.   .
T Consensus       135 d~~------d~e~l~~~i~~~t--klI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~~l---~  200 (400)
T PRK06234        135 DTS------NLEEVRNALKANT--KVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQRPL---Q  200 (400)
T ss_pred             CCC------CHHHHHHHhccCC--eEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCCch---h
Confidence            432      7899999998765  99999999999999999   99999999997  9999999999 44322221   2


Q ss_pred             CCcEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 015890          219 GDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN  295 (398)
Q Consensus       219 ~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  295 (398)
                      .+.++++.|++|.++.+|.++ ||++++   +++++.++..  ....+.+.++...+.+...++.    +..+.++..++
T Consensus       201 ~g~Divv~S~sK~l~g~g~~~gG~v~~~---~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----l~~r~~~~~~n  273 (400)
T PRK06234        201 LGADVVVHSATKYLNGHGDVIAGFVVGK---EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----LQIRMEKHCKN  273 (400)
T ss_pred             hCCcEEEeeccccccCCCCceeEEEEec---HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHH
Confidence            245689999999998778764 899988   6777777542  2233456666666666666654    44555666677


Q ss_pred             HHHHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----
Q 015890          296 REIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----  353 (398)
Q Consensus       296 ~~~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----  353 (398)
                      ..++.+.|++++.+ +++.|.                .+..+.+++.........+++.| +-.++.+.-|....     
T Consensus       274 a~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p  352 (400)
T PRK06234        274 AMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNV-KLATLAVSLGDAETLIQHP  352 (400)
T ss_pred             HHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhC-CcceEeccCCCCCceecCC
Confidence            88888888876643 222111                13345666653211233444433 23333333332110     


Q ss_pred             ------------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 ------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 ------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                        .++.||+|++-   |+.+.+++.|.+++..+
T Consensus       353 ~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~~  398 (400)
T PRK06234        353 ASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDLI  398 (400)
T ss_pred             ccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHH
Confidence                              13679999997   67778888888888764

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.96  E-value=2e-25  Score=208.87  Aligned_cols=345  Identities=14%  Similarity=0.146  Sum_probs=229.7

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+.  ..++. ....+....+++.+....+. .+.+++++|+++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~--~~~~~-~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e  112 (408)
T PRK04612         37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL--WHTSN-VFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANE  112 (408)
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhc--ccccc-ccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHH
Confidence            4789999998774  3333 5899999999998763  12212 12234455666666554332 268999999999999


Q ss_pred             HHHHHhcc----C----C-CEEEEeCCCCcChhhHHHhc-CcEEEE--eccCCCC---CCCCChHHHHHhhccCCCCeEE
Q 015890          104 NIVLTLCD----A----G-DSVVMFAPYYFNSYMSFQMT-GVTHIL--VGPCSSK---TLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~~----~----g-d~Vl~~~p~~~~~~~~~~~~-g~~~~~--~~~~~~~---~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      .+++....    .    + .+|+....+|++....+-.. |.....  +.+....   --..|++.+++.++.++ +++|
T Consensus       113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~aav  191 (408)
T PRK04612        113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGD-VAAV  191 (408)
T ss_pred             HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCC-EEEE
Confidence            99987642    1    2 46999999999976544332 211100  1011111   01137889999887544 4555


Q ss_pred             EEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          169 SVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       169 ~i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      +++ |.+++|.++  +++++++|.++|++||+++|+||+|  +++.|........+..+.+.+++|.++ +|+++|+++.
T Consensus       192 i~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~-~G~piga~~~  269 (408)
T PRK04612        192 MLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG-GGFPIGAMLA  269 (408)
T ss_pred             EEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc-CCCceEEEEE
Confidence            555 555566543  3679999999999999999999999  666664333223345567889999998 8999999998


Q ss_pred             cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEe
Q 015890          245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA  322 (398)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  322 (398)
                      +   +++.+.+.......+++.+++.++++.+.|+...  +..++..+.....++.+.+..++.+.+....+. |.++.+
T Consensus       270 ~---~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~~i  345 (408)
T PRK04612        270 G---PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLMLGA  345 (408)
T ss_pred             C---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEEEE
Confidence            8   6777777655555677889999999999987522  222333333333344444433445544445566 666666


Q ss_pred             eCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          323 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       323 ~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .+... .....+++..+ .++||++.+.    .++.+|+.+.. .+++++++++++|.+++.++.++
T Consensus       346 ~~~~~~~~~a~~i~~~l-~~~Gvlv~~~----g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~~  407 (408)
T PRK04612        346 VLAPAHAGQAGAILDLA-AEHGLLLLQA----GPDVLRFVPALNLTDAELADGLARLRLALADYVAQ  407 (408)
T ss_pred             EecCchhhHHHHHHHHH-HHCCeEEeeC----CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhhc
Confidence            66421 11244566655 5899999774    34789999877 79999999999999999887643

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.95  E-value=1.4e-25  Score=211.29  Aligned_cols=344  Identities=13%  Similarity=0.104  Sum_probs=225.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.....+.  ....+....+++.+....+. ..+.+++++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~  114 (421)
T PRK06777         37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQ--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAV  114 (421)
T ss_pred             CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccc--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHH
Confidence            4689999998764  2333 5899999999998763222121  11123344555666554432 245799999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-CcE-------------EEEeccCCCCCC----CCChHHHHHhhcc-
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GVT-------------HILVGPCSSKTL----HPDADWLEKTLET-  161 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~d~e~l~~~l~~-  161 (398)
                      +.+++...  ....+|+....+|++....+... +..             +..+ +.+....    ..+++.+++.++. 
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~l~~~~~~~  193 (421)
T PRK06777        115 ENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHA-LYPNELHGVSVEEALSSVERLFKAD  193 (421)
T ss_pred             HHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCccccCcCHHHHHHHHHHHHHhc
Confidence            99999764  22357999999999977544322 210             1111 1111000    1135667777752 


Q ss_pred             --CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          162 --KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       162 --~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                        ...+++|+++..++..|. +++++.+++|.++|++||+++|+||+|  +++.|........+....+.+++|.++ +|
T Consensus       194 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~-~G  272 (421)
T PRK06777        194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLG-GG  272 (421)
T ss_pred             cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhc-CC
Confidence              234788888877888886 578999999999999999999999999  766664322222221222347999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCCCccc
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVK  312 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~  312 (398)
                      +|+||++++   +++++.+.......+++.++..++++.++|+..++  ++..++.+++.+++.+.|+    +.+.+..+
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v  347 (421)
T PRK06777        273 MPISAVVGR---AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKAKASCPAIVDI  347 (421)
T ss_pred             CceEEEEEc---HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence            999999999   78888776555556788899999999999974221  2334444444455544444    34554556


Q ss_pred             cCCccEEEEeeCCCC--CCChHHHHHHH---HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEK--HLDDFEVVRWL---AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~--~~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      .+.|.++ .+.+...  .....++...+   +.++||.+.|+..+  .+++||++.. .+++++++++++|.+++.
T Consensus       348 rg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        348 RARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             cCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            6775554 4433221  11122333322   34799999997654  3689999865 799999999999998863

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.95  E-value=7e-26  Score=211.65  Aligned_cols=314  Identities=20%  Similarity=0.207  Sum_probs=229.4

Q ss_pred             CCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHh---ccCCC
Q 015890           43 QPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL---CDAGD  114 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~----~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l---~~~gd  114 (398)
                      +.|+.+++++.+.+.+...    ..+.......+..+.+.+.++++.|.++ ++|++++|+|.+++.++.++   .++|+
T Consensus        10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~   89 (371)
T PF00266_consen   10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGD   89 (371)
T ss_dssp             B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTC
T ss_pred             CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccc
Confidence            4689999999988653211    1222233335555555555666668887 89999999999999999999   68999


Q ss_pred             EEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          115 SVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       115 ~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      +|++...+|++..    ...+..|+++..+ +.+.++ .+|++++++.+++++  ++|++++.+|.||...|   +++|.
T Consensus        90 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i-~~~~~~-~~~~~~~~~~l~~~~--~lv~~~~~~~~tG~~~p---i~~I~  162 (371)
T PF00266_consen   90 EVLVTSNEHPSNRYPWEEIAKRKGAEVRVI-PADPGG-SLDLEDLEEALNPDT--RLVSISHVENSTGVRNP---IEEIA  162 (371)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTTEEEEEE-EEGTTS-SCSHHHHHHHHHTTE--SEEEEESBETTTTBBSS---HHHHH
T ss_pred             ccccccccccccccccccccccchhhhccc-cccccc-hhhhhhhhhhhcccc--ceEEeecccccccEEee---eceeh
Confidence            9999999997755    4445779999888 776554 679999999998654  99999999999999999   99999


Q ss_pred             HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------
Q 015890          191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------  261 (398)
Q Consensus       191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~--------  261 (398)
                      ++|+++|+++++|.++ ++......  ...+.+++++|.+|.+|++|  +|+++++   ++.++++......        
T Consensus       163 ~~~~~~~~~~~vD~~~~~g~~~id~--~~~~~D~~~~s~~Kl~gp~G--~g~l~v~---~~~~~~~~p~~~~~~~~~~~~  235 (371)
T PF00266_consen  163 KLAHEYGALLVVDAAQSAGCVPIDL--DELGADFLVFSSHKLGGPPG--LGFLYVR---PEAIERLRPAKPGGGYLDFPS  235 (371)
T ss_dssp             HHHHHTTSEEEEE-TTTTTTSS--T--TTTTESEEEEESTSTTSSST--EEEEEEE---HHHHHHHHTSSSSSSTTTHHH
T ss_pred             hhhhccCCceeEechhccccccccc--cccccceeeecccccCCCCc--hhhheeh---hhhhhcccccccccccccccc
Confidence            9999999999999999 66543332  22345588999999555555  6999999   7777777432221        


Q ss_pred             -------------CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccEEEEee
Q 015890          262 -------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWAR  323 (398)
Q Consensus       262 -------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~  323 (398)
                                   ...+.+.+...++..+++.. ...+++..++..++.+++.+.|++++.+.+..+    ..+..+.+.
T Consensus       236 ~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~  315 (371)
T PF00266_consen  236 LQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFN  315 (371)
T ss_dssp             HHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEE
T ss_pred             chhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEe
Confidence                         12356777777777777653 234677778888899999999999888666442    223455556


Q ss_pred             CCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHH
Q 015890          324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA  373 (398)
Q Consensus       324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~  373 (398)
                      ++.  .+..++...|. ++||.+..|..|.        ..+.||+|++. .+++|++++
T Consensus       316 ~~~--~~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  316 LPG--SDADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             ETT--SSHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             ecC--CCHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            643  35777777765 6699999988775        35899999999 889998864

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.95  E-value=3.9e-25  Score=208.03  Aligned_cols=348  Identities=14%  Similarity=0.076  Sum_probs=228.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +.......+....+++.+.+..+-. .+.+++++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~  114 (425)
T PRK07495         37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAV  114 (425)
T ss_pred             CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            4689999998774  2333 589999999999876321  1111122334455666665544322 25799999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCC--CCCCC--CChHHHHHhhc--
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS--SKTLH--PDADWLEKTLE--  160 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~~~~--~d~e~l~~~l~--  160 (398)
                      +.+++...  ....+|+....+|++........ |.             .+..+ |.+  ..+..  -+++.+++.+.  
T Consensus       115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~l~~~~~~~  193 (425)
T PRK07495        115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHV-PFPVELHGVSVEQSLAALDKLFKAD  193 (425)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEe-cCCcccccccHHHHHHHHHHHHHhc
Confidence            99999764  22368999999999876433221 10             12222 222  11111  11455576664  


Q ss_pred             -cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          161 -TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       161 -~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                       ...++++|+++..+..+|. .+|++.+++|.++|++||+++|+||+|  ++..|........+....+.+++|.++ +|
T Consensus       194 ~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G  272 (425)
T PRK07495        194 VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GG  272 (425)
T ss_pred             cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CC
Confidence             2234788888865555885 578999999999999999999999999  666664333333344556789999998 89


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +++|+++++   +++.+.+.......+++.+++.++++.+.++...  +..++..+.-.+.++.+.+..++.+.+.-+..
T Consensus       273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG  349 (425)
T PRK07495        273 FPLAAVTGR---AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRG  349 (425)
T ss_pred             ccceEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence            999999999   7887777554455677889999998888776521  22233333333334444444444554333334


Q ss_pred             CccEEEEeeCCCCCC---C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          315 EGAIYLWARLPEKHL---D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      . |.++++.+.+...   +   ...++..+ .++|+.+.+...  ..+.+||.+.- .+++++++++++|.++++++.
T Consensus       350 ~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~  423 (425)
T PRK07495        350 P-GFMNAVEFNDADSGLPSAEFANRVRLKA-LEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDILEASILEAS  423 (425)
T ss_pred             C-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence            5 8889998853210   1   23455555 489999976421  14789999777 799999999999999998764

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.95  E-value=1.9e-25  Score=195.20  Aligned_cols=343  Identities=22%  Similarity=0.228  Sum_probs=253.6

Q ss_pred             HHHHHHHHH--cCCCeEEcCCcc--CCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC---
Q 015890           19 MVQIQELVR--GAKNAVSLAQGV--VYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---   88 (398)
Q Consensus        19 ~~~~~~~~~--~g~~~~~l~~g~--~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~---   88 (398)
                      +..+.+.+.  ...+-|||+.|.  +..   +.-+.|.+|-+..........|-+..|.+++.+.+++.+   +|.+   
T Consensus        13 IlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~   89 (396)
T COG1448          13 ILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---FGADSPA   89 (396)
T ss_pred             hhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---cCCCcHH
Confidence            333444443  346799999986  222   344667777776666666788989999999999999987   3432   


Q ss_pred             --CCc--EEEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890           89 --KSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus        89 --~~~--v~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                        .+.  -+=|.|||.|+......+-  .+..+|++++|+|+++...+...|+++..++-.|..+..+|.+.+-+.|+.-
T Consensus        90 l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a  169 (396)
T COG1448          90 LAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA  169 (396)
T ss_pred             HHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC
Confidence              222  2346899999999888774  4556799999999999999999999998883445555568999999988855


Q ss_pred             CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccC-CCcc-------ccccCCcEEEEcccccccC
Q 015890          163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYD-GRKH-------CCVEGDHVVNLFSFSKAYG  233 (398)
Q Consensus       163 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~-~~~~-------~~~~~~~~i~~~s~sK~~~  233 (398)
                      +...+|++. ..|||||.-++.+++.+|+++.++.|.+.++|-+|.+|. |...       ........+++.|+||.||
T Consensus       170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg  249 (396)
T COG1448         170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG  249 (396)
T ss_pred             CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence            544667666 459999999999999999999999999999999994442 2111       1112334788999999999


Q ss_pred             CCcceeEEE--EccCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCCc---h---HHHHHHHHHHHHHHHHHH
Q 015890          234 MMGWRVGYI--AYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTGP---E---WVTERVKDLVRNREIIRE  301 (398)
Q Consensus       234 ~~G~r~G~i--~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~---~~~~~~~~~~~~~~~l~~  301 (398)
                      +-|-|+|++  ++.+  .+.+.+    +.........+++......+...|.+.+   +   .+..+++++.+.|..+.+
T Consensus       250 LYgERVGa~~vva~~--~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~  327 (396)
T COG1448         250 LYGERVGALSVVAED--AEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVD  327 (396)
T ss_pred             hhhhccceeEEEeCC--HHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999974  3443  444433    3334444556677777777777777511   2   346677888888889999


Q ss_pred             HhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          302 ALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       302 ~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      .|+..+.   +..+..+.|+|.+..+.      .+.+.+|.+++||++..+.        |||++..++..++.+++.|.
T Consensus       328 ~L~~~~~~~~f~~i~~Q~GMFsy~Gls------~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~  393 (396)
T COG1448         328 ALKALGAPRNFDFIISQRGMFSYTGLS------PEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIA  393 (396)
T ss_pred             HHHhhCCCcccchHhhcCceeecCCCC------HHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHH
Confidence            9887432   45666777998886553      4667789899999998754        99999988999999988887


Q ss_pred             HH
Q 015890          379 RG  380 (398)
Q Consensus       379 ~~  380 (398)
                      ++
T Consensus       394 ~v  395 (396)
T COG1448         394 AV  395 (396)
T ss_pred             hh
Confidence            65

>PLN02624 ornithine-delta-aminotransferase

Probab=99.95  E-value=3.7e-25  Score=211.09  Aligned_cols=343  Identities=13%  Similarity=0.115  Sum_probs=221.4

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.....   .+|.+.+++.+++.+.....  . ....+....+++.+.+.++  .+.++++++|++|++
T Consensus        72 ~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~--~-~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e  146 (474)
T PLN02624         72 PEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSS--R-AFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVE  146 (474)
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcc--c-ccCCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHH
Confidence            45788999987754333   38999999999997633221  1 1112333445555554444  357999999999999


Q ss_pred             HHHHHhcc---------CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhcc-CCCCe
Q 015890          104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLET-KPTPK  166 (398)
Q Consensus       104 ~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~-~~~~~  166 (398)
                      .+++....         ++ ..|+....+|++....+-....+...   +.|....-   ...|++.+++.++. ...++
T Consensus       147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ia  226 (474)
T PLN02624        147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIA  226 (474)
T ss_pred             HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEE
Confidence            99986542         12 35888888998876444332211100   00110000   01268889998863 23478


Q ss_pred             EEEEeCCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          167 LVSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       167 ~v~i~~p~nptG~~~~~~-~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +|+++.++|++|.+++++ ++++|.++|++||+++|+||+|  +++.|........+....+.+++|.+|.+++++|+++
T Consensus       227 aiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~  306 (474)
T PLN02624        227 AFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVL  306 (474)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeee
Confidence            899999999999987666 6999999999999999999999  6555543222111111223357899986669999999


Q ss_pred             ccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cCCC-CccccCCccE
Q 015890          244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGE-GAVKGGEGAI  318 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~-~~~~~~~~~~  318 (398)
                      .+   +++++.+.......+++.++..++++.++|+...+  .+..+...++.+.+++.|+    +++. +....+. +.
T Consensus       307 ~~---~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G~  380 (474)
T PLN02624        307 AD---KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-GL  380 (474)
T ss_pred             ec---HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEee-EE
Confidence            98   67777766555555667888999999988875211  1122233333333333333    2332 2223345 45


Q ss_pred             EEEeeCCCCC---CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          319 YLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       319 ~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ++.+.+....   ....++++.| .++||++.|+    .++.|||+++. .+++++++++++|.+++++..
T Consensus       381 ~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~----~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~  446 (474)
T PLN02624        381 LNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPT----HDTIIRLAPPLSISEDELQECSKALSDVLEHDL  446 (474)
T ss_pred             EEEEEecCCCcChHHHHHHHHHH-HhCCeEEecC----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence            5555554321   1245677776 5899999886    36789999765 799999999999999986654

>PLN02242 methionine gamma-lyase

Probab=99.95  E-value=2.2e-25  Score=208.83  Aligned_cols=285  Identities=17%  Similarity=0.185  Sum_probs=199.9

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-----HhcCcEEEEec
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVG  141 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~  141 (398)
                      .+...++++.++++.    |  .+.+++++|+++|+..++.+++++||+|+++.|.|.++...+     +..|.+++.+ 
T Consensus        75 ~Pt~~~LE~~lA~l~----g--~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~-  147 (418)
T PLN02242         75 NPTVLNLGRQMAALE----G--TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV-  147 (418)
T ss_pred             ChhHHHHHHHHHHHh----C--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc-
Confidence            455566777777765    4  355778999999999999999999999999999998776554     3477787766 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG  219 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~  219 (398)
                      +.      .|++.++++++++. +++|++++|+||||.+.+   +++|+++|+++|+++|+|++|  +.+..     ...
T Consensus       148 d~------~d~e~l~~~i~~~~-tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~-----~~~  212 (418)
T PLN02242        148 DI------TDLEAVKKAVVPGK-TKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP-----ARL  212 (418)
T ss_pred             CC------CCHHHHHHhcCcCC-CEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH-----HHc
Confidence            33      27899999998642 499999999999999998   999999999999999999999  33321     112


Q ss_pred             CcEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890          220 DHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  296 (398)
Q Consensus       220 ~~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  296 (398)
                      +.++++.|+||.++.+|.+ .||++++   +++++.+......  ...+.+...+.+...++..  ..+..+.+++.+++
T Consensus       213 g~divv~S~SK~l~g~g~~~gG~iv~~---~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l--~tl~~r~~~~~~~a  287 (418)
T PLN02242        213 GADVVVHSISKFISGGADIIAGAVCGP---AELVNSMMDLHHGALMLLGPTMNPKVAFELSERL--PHLSLRMKEHCRRA  287 (418)
T ss_pred             CCcEEEEeCccccCCCCCceEEEEEcC---HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC--CcHHHHHHHHHHHH
Confidence            3568899999999878877 5899988   7888888766442  2344455566665555543  34566777889999


Q ss_pred             HHHHHHhccCCCCccccCC-------------------ccEEEEeeCCCCCCChHHHHHHHHHhc----CeEEecCCCCC
Q 015890          297 EIIREALSPLGEGAVKGGE-------------------GAIYLWARLPEKHLDDFEVVRWLAHRH----GVVVIPGGACG  353 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~----gi~v~~g~~~~  353 (398)
                      +.+.+.|++++. ++..|.                   .+-.+.+.+. .......+++.+ +--    .+.+.-|..-.
T Consensus       288 ~~la~~L~~~~~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l-~~~~~~~~~~~slG~~~s  364 (418)
T PLN02242        288 MEYAKRMKELGL-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD-TEERANRLMRYL-QNSTQFGFMAVSLGYYET  364 (418)
T ss_pred             HHHHHHHHhCCC-EEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-CHHHHHHHHHHh-hcccccceeeecCCCCCc
Confidence            999999998864 454321                   1234455553 111233344433 111    12232222110


Q ss_pred             -----------------------CCCeEEEEecCCCHH-HHHHHHHHHHHHHHHH
Q 015890          354 -----------------------CRGHLRISFGGLVED-DCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 -----------------------~~~~iRi~~~~~~~~-~~~~~~~~l~~~~~~~  384 (398)
                                             .++.||+|++-   | +.+.+++.|.+++.++
T Consensus       365 l~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~  416 (418)
T PLN02242        365 LMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM  416 (418)
T ss_pred             eeeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence                                   13579999997   5 4778888898888765

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.95  E-value=1.1e-24  Score=208.53  Aligned_cols=358  Identities=16%  Similarity=0.094  Sum_probs=238.0

Q ss_pred             hHHHHHHHHHHcCCC--eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC---CCCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890           17 PIMVQIQELVRGAKN--AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG---ADEGLPELRDALVKKLNQENKLYKSS   91 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~--~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~~~~~~~~~l~~~l~~~~~~~~~~   91 (398)
                      ...+.+.+.......  ..-++.|.+....+|.+.+++.+...-...+.|+   ...|..+++..+++++++++|++...
T Consensus        53 ~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~  132 (481)
T PRK04366         53 EVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVT  132 (481)
T ss_pred             HHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceE
Confidence            444555555544322  1224557677778899999888762112466773   45788999999999999999987444


Q ss_pred             EEEecChHHHHHHH--HH-HhccCCC----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890           92 VMVTAGANQAFVNI--VL-TLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (398)
Q Consensus        92 v~~~~g~t~a~~~~--~~-~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~  164 (398)
                      +..++|+++.+..+  ++ .+.++||    +|+++.++|+.+...++..|++++.+ +.+. ++.+|++.|++.+++++ 
T Consensus       133 l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v-~~~~-~~~~D~e~L~~~i~~~t-  209 (481)
T PRK04366        133 LQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEI-PSNE-DGLVDLEALKAAVGEDT-  209 (481)
T ss_pred             EEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHhhcccCC-
Confidence            54445554444422  22 3345665    99999999999999999999999999 7764 35789999999998765 


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC----ccee
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRV  239 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~  239 (398)
                       ++|++++|+ |||.+  .+++++|+++|+++|+++++|+++ ....+.. .....+.+++++|.+|+|+.|    |..+
T Consensus       210 -~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~  284 (481)
T PRK04366        210 -AALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGS  284 (481)
T ss_pred             -eEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC-CccccCCCEEEEechhhcCCCCCCCCCCe
Confidence             899999988 99975  234999999999999999999999 4422321 222334568899999998643    4567


Q ss_pred             EEEEccCCcHHHHHHHHHh-------------------hccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHH
Q 015890          240 GYIAYPSEVEGFATQLLKV-------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREII  299 (398)
Q Consensus       240 G~i~~~~~~~~~~~~l~~~-------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l  299 (398)
                      |++.++   +++.+.+...                   +....++.+.....++...+.. +.+.+++..++...+.+++
T Consensus       285 G~l~~~---~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l  361 (481)
T PRK04366        285 GPVGVK---EELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYL  361 (481)
T ss_pred             eeeeeh---hhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888877   4555443100                   0001112222333333444433 4456677778888888999


Q ss_pred             HHHhccCCCCccccCCccEEEEeeCC---CCCCChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEecC-CCHHHHHHHH
Q 015890          300 REALSPLGEGAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG-LVEDDCKAAA  374 (398)
Q Consensus       300 ~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~-~~~~~~~~~~  374 (398)
                      .+.|+++..+. +......-+.++++   ....+..++.++|. ++||.+....... ..+.+|++++. .+.+|+++++
T Consensus       362 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~  439 (481)
T PRK04366        362 KARLKDIYDLP-YDRPCMHEFVLSGKKLKETGVRTLDIAKRLL-DYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFI  439 (481)
T ss_pred             HHHhHhhCccc-CCCCeeEEEEEECccccccCCCHHHHHHHHH-HCCccCCccccccccCCeEEEcccCCCCHHHHHHHH
Confidence            98888762212 22111122334432   11235678888875 8899875322212 35789999987 7899999999


Q ss_pred             HHHHHHHHHHhcc
Q 015890          375 DRLRRGLEELVKD  387 (398)
Q Consensus       375 ~~l~~~~~~~~~~  387 (398)
                      +.|.++.++..++
T Consensus       440 ~~l~~i~~~~~~~  452 (481)
T PRK04366        440 AAMKQIAEEAKEN  452 (481)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999998877543

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.95  E-value=4e-25  Score=193.53  Aligned_cols=348  Identities=19%  Similarity=0.245  Sum_probs=215.7

Q ss_pred             HHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhc----------CCCCCCC-CCCCCcHHHHHHHHHHHhhhcCC
Q 015890           19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW----------DPSISKY-GADEGLPELRDALVKKLNQENKL   87 (398)
Q Consensus        19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~----------~~~~~~y-~~~~~~~~~~~~l~~~l~~~~~~   87 (398)
                      +++.-+.+....=-+||+.|-|.    ++-++--...+.          ..+.-+| +...|.+++|+-+++.+    ++
T Consensus        13 l~~~y~~~ka~~L~LdmtRGKPs----~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~ll----gv   84 (425)
T PF12897_consen   13 LRKQYEELKAKGLKLDMTRGKPS----PEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELL----GV   84 (425)
T ss_dssp             HHHHHHHHHHTT--EES---S------HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHH----TS
T ss_pred             HHHHHHHHHHcCCCcccCCCCCC----HHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHh----CC
Confidence            44444444454557888877543    333331111111          1125578 78899999999999988    89


Q ss_pred             CCCcEEEecChHHHH-HHHHH-Hhc----c---C-----CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890           88 YKSSVMVTAGANQAF-VNIVL-TLC----D---A-----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD  153 (398)
Q Consensus        88 ~~~~v~~~~g~t~a~-~~~~~-~l~----~---~-----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e  153 (398)
                      ++++|++..+++--+ +.++. +++    +   |     .-+.|+|.|+|..+..+.+.+|++.+.+ |+.++|  +|+|
T Consensus        85 ~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~V-pM~~dG--PDmD  161 (425)
T PF12897_consen   85 PPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPV-PMTEDG--PDMD  161 (425)
T ss_dssp             -GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEE-EEETTE--E-HH
T ss_pred             CHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEec-CCCCCC--CCHH
Confidence            999988886655433 33322 221    1   1     1268999999999999999999999999 998886  7999


Q ss_pred             HHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEeece-e-cc-CCCccc-----------cc
Q 015890          154 WLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTY-F-MY-DGRKHC-----------CV  217 (398)
Q Consensus       154 ~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l-~~~~~~~livDe~~-~-~~-~~~~~~-----------~~  217 (398)
                      .+++.+.+++.+|.+|.. --+||||.+++.|.+++++++ +...+..++.|.+| + .. +..+..           ..
T Consensus       162 ~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG  241 (425)
T PF12897_consen  162 MVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG  241 (425)
T ss_dssp             HHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT
T ss_pred             HHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC
Confidence            999999766678999887 448999999999999999998 44679999999999 2 22 121111           11


Q ss_pred             cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc----hHHHHHHHHHH
Q 015890          218 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP----EWVTERVKDLV  293 (398)
Q Consensus       218 ~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~  293 (398)
                      .+++++...|.||.. .||-+++++..+   ++-++.+.+.....+.+.....|..-..++.+.+    .++++.++.++
T Consensus       242 npdrv~~F~STSKIT-f~GaGva~~aaS---~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~  317 (425)
T PF12897_consen  242 NPDRVYVFASTSKIT-FPGAGVAFFAAS---EANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILR  317 (425)
T ss_dssp             -TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEecccccc-cCCcceeeeecC---HHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHh
Confidence            257889999999987 589999999999   7888888877777788999999999999998632    34555555555


Q ss_pred             HHHHHHH----HHhc-cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec-CCCC--C---CCCeEEEEe
Q 015890          294 RNREIIR----EALS-PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGAC--G---CRGHLRISF  362 (398)
Q Consensus       294 ~~~~~l~----~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~--~---~~~~iRi~~  362 (398)
                      -+.+...    +.|. ..+..++..|.||+|++++..++  .+..+++ ++++.||.+.| |..|  +   .+.+|||+.
T Consensus       318 PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G--~AkrvV~-lakeAGV~LT~AGAtfPyg~DP~D~nIRiAP  394 (425)
T PF12897_consen  318 PKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG--TAKRVVE-LAKEAGVALTPAGATFPYGKDPRDSNIRIAP  394 (425)
T ss_dssp             HHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT---HHHHHH-HHHHTTEE---TTTTSGGG--TTS-EEEE--
T ss_pred             hhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC--hHHHHHH-HHHHhCceeCCCCCCCCCCCCCCCCcEEecC
Confidence            5554444    4454 44556788899999999998764  3666665 67899999998 4444  2   246899999


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHH
Q 015890          363 GGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       363 ~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.++.+|++.+++.+.-+++-.
T Consensus       395 S~P~leel~~Am~~~~~cv~la  416 (425)
T PF12897_consen  395 SYPSLEELETAMDVFATCVKLA  416 (425)
T ss_dssp             SSS-HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998877543

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK07505 hypothetical protein; Provisional

Probab=99.95  E-value=9.6e-25  Score=205.82  Aligned_cols=330  Identities=16%  Similarity=0.163  Sum_probs=208.5

Q ss_pred             HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-CCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-ISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..+. ..+-.+|++.+++.+++.+.. ...... .....+..+.+++.+.+..+.   ..++++++++++.
T Consensus        43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~  119 (402)
T PRK07505         43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---SVLTFTSCSAAHL  119 (402)
T ss_pred             cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---CEEEECChHHHHH
Confidence            4688899997643 222468999999999986521 111111 112234455555555555564   4454555668888


Q ss_pred             HHHHHhc----cCC-CEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          104 NIVLTLC----DAG-DSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       104 ~~~~~l~----~~g-d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      .++..+.    .+| ..|++.+..|++..   ......+.+++.+ +.      .|++.+++.+++++  +++++++|+|
T Consensus       120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~-~~------~d~~~l~~~~~~~~--~~~vl~~p~~  190 (402)
T PRK07505        120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETI-DH------NDLDALEDICKTNK--TVAYVADGVY  190 (402)
T ss_pred             HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEe-CC------CCHHHHHHHHhcCC--CEEEEEeccc
Confidence            7876543    223 34767776665532   1122234566666 43      38899999987654  7888899999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-e-cc--CCCcc----ccc-cCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F-MY--DGRKH----CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~-~~--~~~~~----~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      |+|.+.+   +++|.++|+++|+++|+||+| + .+  .+...    ... .++++++++|+||.++.+|   ||++.++
T Consensus       191 ~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~  264 (402)
T PRK07505        191 SMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD  264 (402)
T ss_pred             ccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence            9999999   888899999999999999998 3 22  22211    111 3567889999999998665   8876543


Q ss_pred             CcHHHHHHHHHhhccCCC--CcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890          247 EVEGFATQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  323 (398)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  323 (398)
                        +++++.+.......++  +.+.++.+++.++++. .++++.+..+.++++...+...+...    + ...+.++.++.
T Consensus       265 --~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~g~~~~i~~~~  337 (402)
T PRK07505        265 --AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q-SGSFLPIRLIY  337 (402)
T ss_pred             --HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C-CCCCCCEEEEE
Confidence              7788887765543333  3445677777777762 23334444444544444433322111    1 12212223333


Q ss_pred             CCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++.. ....++.++|+ ++||.++++..+..   .++|||+++. .+++++++++++|.+++.+
T Consensus       338 ~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        338 IGDE-DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             eCCH-HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            3321 13456778776 88999998754322   3689999987 6899999999999988754

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.95  E-value=8e-25  Score=204.24  Aligned_cols=286  Identities=19%  Similarity=0.180  Sum_probs=198.9

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |.  +..++++++++++..++.+++++||+|+++.+.|.+....+    +..|+++..+ 
T Consensus        59 ~~pt~~~Le~~lA~l~----G~--~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~-  131 (386)
T PRK06767         59 GNPTVKLFEERMAVLE----GG--EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC-  131 (386)
T ss_pred             CCcchHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEe-
Confidence            4555677888888876    43  34555666678999999999999999999999887654443    3446665554 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++++++++  ++|++++|+||||.+.+   +++|.++|+++|+++|+|++| .++...+.   ..+
T Consensus       132 ~~------~d~~~l~~~i~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~pl---~~g  197 (386)
T PRK06767        132 DM------ETEADIENKIRPNT--KLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQRPL---ELG  197 (386)
T ss_pred             CC------CCHHHHHHhhCcCc--eEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hcC
Confidence            22      37889999998765  99999999999999999   899999999999999999999 44333221   223


Q ss_pred             cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHH-HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLL-KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      .++++.|++|.++.+|.++ |+++++   ++.++.+. ..........+++.++++...|+.    +..+.++.++++..
T Consensus       198 ~Div~~S~sK~l~g~g~~~gG~v~~~---~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----l~~r~~~~~~~a~~  270 (386)
T PRK06767        198 CDAVVHSATKYIGGHGDVVAGVTICK---TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAVRMDRHCDNAEK  270 (386)
T ss_pred             CcEEEecCcceecCCCCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHH
Confidence            4588899999998778775 888888   56665543 333323344555555554444443    45677778899999


Q ss_pred             HHHHhccCCCCc-cccCC----------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------------
Q 015890          299 IREALSPLGEGA-VKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------------  353 (398)
Q Consensus       299 l~~~l~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------  353 (398)
                      +.+.|++++.++ +..|.          .+..+.+.+.....+...+++.| +..++.+.-|....              
T Consensus       271 la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~  349 (386)
T PRK06767        271 IVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAIP  349 (386)
T ss_pred             HHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecCCCCcCccccCCCccccccCC
Confidence            999999987755 33221          23455566653222355666665 45666665553210              


Q ss_pred             ---------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 ---------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 ---------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                               .++.||+|++-   |+.+.+++.|.+++..
T Consensus       350 ~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~  385 (386)
T PRK06767        350 AELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK  385 (386)
T ss_pred             HHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                     13579999997   6777888888888764

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.95  E-value=1.7e-24  Score=196.64  Aligned_cols=326  Identities=20%  Similarity=0.183  Sum_probs=239.5

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|++++||+.++ -.+..+|.+++++.+.+.+...+      -++...-..++++.+++|+    |  .+..++.+++-.
T Consensus        37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g--~e~al~f~SGy~  110 (388)
T COG0156          37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----G--AEAALLFSSGFV  110 (388)
T ss_pred             CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh----C--CCcEEEEcccch
Confidence            368899999887 45568899999999988763211      2233344466677777766    4  345566666679


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--C--CCeEEEEeCCCCC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--P--TPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~--~~~~v~i~~p~np  176 (398)
                      |+..++.++++++|-|+...-.|.+....++..+.+.+.+ .      +.|+++||+.++..  .  +.++|+.....+.
T Consensus       111 AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f-~------HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSM  183 (388)
T COG0156         111 ANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRF-K------HNDLDHLEALLEEARENGARRKLIVTEGVFSM  183 (388)
T ss_pred             hHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEe-c------CCCHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence            9999999999999999999999999999999999998887 2      24889999999751  1  2477777788899


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCccc----cccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      .|.+.|   |++|++++++|+.++++||+| .   +..|....    ....+.+|+++|++|+||..|   ||+.++   
T Consensus       184 dGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~---  254 (388)
T COG0156         184 DGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS---  254 (388)
T ss_pred             CCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc---
Confidence            999999   999999999999999999999 3   33343322    112345799999999999777   999999   


Q ss_pred             HHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890          249 EGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  326 (398)
Q Consensus       249 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ..+++.+......  ++.+.++...+++.++++. .......+++++++...+++.+...+. .+.+.. +.++.+.+..
T Consensus       255 ~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~-l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~-s~I~pv~~gd  331 (388)
T COG0156         255 AALIDYLRNRARPFIFSTALPPAVAAAALAALRI-LEEGPERRERLQELAAFFRSLLKALGL-VLLPSE-SPIIPVILGD  331 (388)
T ss_pred             HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCeeeeEeCC
Confidence            7888888765332  2334456666667777775 233456677788888888877766565 333333 5556555543


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      . ....++...|++ .||++.+...+.   +...+|++++. .++++++++++.|.+.
T Consensus       332 ~-~~a~~~s~~l~~-~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         332 E-ERALEASRALLE-EGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             H-HHHHHHHHHHHH-CCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            2 236677777874 599998877654   34689999999 8999999999988764

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.95  E-value=1.5e-24  Score=202.28  Aligned_cols=279  Identities=20%  Similarity=0.217  Sum_probs=192.3

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~  143 (398)
                      +...++++.+++++    |.  +++++++|+++|+..++.+++++||+|+++.+.|.+...    .++..|++++.+ +.
T Consensus        61 p~~~~le~~la~l~----g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~  133 (390)
T PRK08133         61 PTVTMFQERLAALE----GA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFV-DL  133 (390)
T ss_pred             hHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEE-CC
Confidence            34455666666655    53  468889999999999999999999999999999976443    456789999888 54


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                      +      |++.+++.+++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| ......+   ...+.+
T Consensus       134 ~------d~~~l~~~i~~~t--klV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~p---l~~g~D  199 (390)
T PRK08133        134 T------DLDAWRAAVRPNT--KLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQP---LKLGAD  199 (390)
T ss_pred             C------CHHHHHHhcCcCC--eEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhCCc
Confidence            2      7889999998765  99999999999999999   899999999999999999998 3322221   122345


Q ss_pred             EEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  301 (398)
                      +++.|+||.++.+|.++ |+++.+   ++.++.+...........+...++.+...+    +.+..+.+++.+++..+.+
T Consensus       200 ivv~S~sK~~~g~g~~~GG~vv~~---~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl----~tl~~R~~~~~~~a~~la~  272 (390)
T PRK08133        200 VVIHSATKYLDGQGRVLGGAVVGS---KELMEEVFGFLRTAGPTLSPFNAWVFLKGL----ETLSLRMEAHSANALALAE  272 (390)
T ss_pred             EEEeecceeecCCcceEeEEEEcC---HHHHHHHHHHHHHhCCCCCHHHHHHHHccc----chHHHHHHHHHHHHHHHHH
Confidence            88999999998788887 566666   566666655444334445555444433333    3466677777788888999


Q ss_pred             HhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------
Q 015890          302 ALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------  353 (398)
Q Consensus       302 ~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------  353 (398)
                      .|++.+.+. ++.|.                .+..+.+++..    +.+.+.+++++-.+... +..++           
T Consensus       273 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~----~~~~~~~f~~~l~l~~~-~~slG~~~sl~~~p~~  347 (390)
T PRK08133        273 WLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG----GREAAWRVIDATRLISI-TANLGDTKTTITHPAT  347 (390)
T ss_pred             HHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC----CHHHHHHHHHhCCcceE-eccCCCcceeeecCCC
Confidence            998776532 22111                13345556642    23334444444444321 11110           


Q ss_pred             ----------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          354 ----------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       354 ----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                                      .++.||+|++-   |+.+.+++.|.++++
T Consensus       348 ~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  389 (390)
T PRK08133        348 TTHGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA  389 (390)
T ss_pred             CCcccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence                            13589999997   667778888888775

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.94  E-value=2e-24  Score=204.97  Aligned_cols=346  Identities=12%  Similarity=0.074  Sum_probs=223.4

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ .+|++.+++.+++.+.....  ......+....+++.|.+..+-..+.++++++|++|+.
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e  117 (433)
T PRK08117         40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP--SGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIE  117 (433)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence            4688999998874  3343 58999999999987532111  11112344556666666554333467999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C--c-----------EEEEeccCCCCC---CC--------CChHHHH
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--V-----------THILVGPCSSKT---LH--------PDADWLE  156 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g--~-----------~~~~~~~~~~~~---~~--------~d~e~l~  156 (398)
                      .+++...  ....+|+....+|++........ +  .           .+..+ |.+...   ..        .+++.++
T Consensus       118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  196 (433)
T PRK08117        118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQA-PYPYCDRCPKGEDPEVCFLECLRDLE  196 (433)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEe-CCCccccccccCchhHHHHHHHHHHH
Confidence            9999743  22368999999999876543211 1  0           11122 211100   00        1456677


Q ss_pred             Hhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890          157 KTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK  230 (398)
Q Consensus       157 ~~l~~---~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK  230 (398)
                      +.++.   ...+++|+++..+...|.+ .++++++++.++|++||+++|+||+|  ++..|........+....+.+++|
T Consensus       197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK  276 (433)
T PRK08117        197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAK  276 (433)
T ss_pred             HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhh
Confidence            76642   2336888888777777875 57889999999999999999999999  666664332222222234569999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc----cC
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PL  306 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~----~~  306 (398)
                      .+| +|+++|+++++   +++.+.+.......+++.+++.++++.++|+....  +...++++++.+++++.|+    ++
T Consensus       277 ~lg-~G~pigav~~~---~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~  350 (433)
T PRK08117        277 GIA-SGLPLSAVVAS---KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEVLKEKH  350 (433)
T ss_pred             hcc-CCCcceeEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            998 89999999999   78887775444455677899999999999875211  1223333333444444333    34


Q ss_pred             CCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +.+.-.... +.++.+.+....     .....+...+ .++||.+.+...  ..+.+|++++. .+++++++++++|.++
T Consensus       351 ~~~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~  426 (433)
T PRK08117        351 PVIGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEA  426 (433)
T ss_pred             CceeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence            432223333 566666663211     1123455555 589999876321  25789999765 7999999999999999


Q ss_pred             HHHHh
Q 015890          381 LEELV  385 (398)
Q Consensus       381 ~~~~~  385 (398)
                      ++++.
T Consensus       427 l~~~~  431 (433)
T PRK08117        427 LTEYE  431 (433)
T ss_pred             HHHHh
Confidence            98764

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.94  E-value=4.8e-25  Score=204.45  Aligned_cols=280  Identities=18%  Similarity=0.228  Sum_probs=199.9

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  142 (398)
                      .+...++++.++++.    |.+.  .++++|+++++..++ .++++||+|+++.|.|++..    ..++..|+++..+ +
T Consensus        51 ~pt~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d  122 (366)
T PRK08247         51 NPTRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYV-N  122 (366)
T ss_pred             CchHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEE-C
Confidence            344556666666665    5533  477788889999876 57789999999999998743    3455689998888 4


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .      .|++.+++.+++++  ++|++++|+||+|...+   +++|+++|+++|+++|+|++| .+....+   ...+.
T Consensus       123 ~------~d~~~l~~~i~~~t--klv~le~P~NP~~~~~d---l~~I~~la~~~g~~lIvD~t~~~~~~~~p---~~~g~  188 (366)
T PRK08247        123 T------ASLKAIEQAITPNT--KAIFIETPTNPLMQETD---IAAIAKIAKKHGLLLIVDNTFYTPVLQRP---LEEGA  188 (366)
T ss_pred             C------CCHHHHHHhcccCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccCc---hhcCC
Confidence            3      27899999998765  99999999999876555   999999999999999999999 4332222   12345


Q ss_pred             EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|+||.++. ++.+.|+++.++  +++.+.+...+.....+.+++.++++...++.    +..+.++.+++++.+.
T Consensus       189 di~i~S~sK~~~g~~d~~~G~iv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----l~~r~~~~~~~a~~l~  262 (366)
T PRK08247        189 DIVIHSATKYLGGHNDVLAGLVVAKG--QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMRQHEENAKAIA  262 (366)
T ss_pred             cEEEeecceeccCCCceeeeEEecCh--HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence            6899999999963 346889999874  56777777666555566777777776666653    4556667788999999


Q ss_pred             HHhccCCCCc-cccC-CccEEEEeeCCCCCCChHHHHHHHHH-------------hcCeEEecCCCCC------------
Q 015890          301 EALSPLGEGA-VKGG-EGAIYLWARLPEKHLDDFEVVRWLAH-------------RHGVVVIPGGACG------------  353 (398)
Q Consensus       301 ~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~-------------~~gi~v~~g~~~~------------  353 (398)
                      +.|++++.+. +..| .+++|.+ .+..     .+...++++             ...+.+.|++.++            
T Consensus       263 ~~L~~~p~v~~v~~P~~gg~~sf-~~~~-----~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~g  336 (366)
T PRK08247        263 AFLNEQPGVTDVLYPGRGGMLSF-RLQD-----EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANG  336 (366)
T ss_pred             HHHHhCCCeeEEecCCcCcEEEE-EECC-----HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcC
Confidence            9999887644 4444 6676666 5642     222222222             2345555654321            


Q ss_pred             -CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 -CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 -~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                       .++.+|+|++-   |+.+.+++.|.+++.+
T Consensus       337 i~~~~~R~svGl---E~~~dl~~dl~~al~~  364 (366)
T PRK08247        337 VCNRLLRFSVGI---ENVEDLIADLKQAFKQ  364 (366)
T ss_pred             CCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence             13579999996   6778888888888875

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.94  E-value=2.9e-24  Score=199.73  Aligned_cols=282  Identities=22%  Similarity=0.247  Sum_probs=201.2

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  141 (398)
                      ..+...++++.++++.    |.  +..++++++++|+..++.+++++||+|+++.+.|.+...    .++..|+++..+ 
T Consensus        38 ~~p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-  110 (369)
T cd00614          38 GNPTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV-  110 (369)
T ss_pred             CChhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe-
Confidence            4455666777777765    42  467778888999999999999999999999999987654    345678888877 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .+....   ....+
T Consensus       111 ~~~------d~~~l~~~i~~~~--~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~---~~~~g  176 (369)
T cd00614         111 DPD------DPEALEAAIKPET--KLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR---PLELG  176 (369)
T ss_pred             CCC------CHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC---hhhhC
Confidence            432      5889999998754  99999999999999999   899999999999999999999 433211   11234


Q ss_pred             cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++.+| .+.|++++++  +++++.+.......+.+.++...+++...++.    +..+.++..+++..+
T Consensus       177 ~Divv~S~tK~l~g~~~~~gG~v~~~~--~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----l~~r~~~~~~na~~l  250 (369)
T cd00614         177 ADIVVHSATKYIGGHSDVIAGVVVGSG--EALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRMERHSENALKV  250 (369)
T ss_pred             CcEEEeccceeccCCCCceEEEEEeCc--HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Confidence            5688999999997555 7899999983  37888887766555666777776666555543    455677788889999


Q ss_pred             HHHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-------------cC
Q 015890          300 REALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-------------PG  349 (398)
Q Consensus       300 ~~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-------------~g  349 (398)
                      .+.|++++.+ ++..|                ..+..+.+.+..   + .+...+++++-.+...             |.
T Consensus       251 a~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~-~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~  326 (369)
T cd00614         251 AEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---G-LEAAKKFLNALKLFSLAVSLGGVESLVEHPA  326 (369)
T ss_pred             HHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC---C-HHHHHHHHHcCCcceEcccCCCCceeeeCCc
Confidence            9999887753 22222                125566667752   1 2333344445555421             11


Q ss_pred             C--CC----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          350 G--AC----------G-CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       350 ~--~~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      .  .+          + .++.||+|++-   |+.+.+++.|.+++
T Consensus       327 ~~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al  368 (369)
T cd00614         327 SMTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL  368 (369)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence            1  00          0 13579999997   67777888887775

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.94  E-value=1.6e-25  Score=207.95  Aligned_cols=307  Identities=17%  Similarity=0.158  Sum_probs=210.3

Q ss_pred             CCcHHHHHHHHHhhcCCCC--CCCCCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc----CC-
Q 015890           43 QPPKMAMEKVKELVWDPSI--SKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AG-  113 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~--~~y~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~----~g-  113 (398)
                      ++|+.+++++.+.+.....  .......+  ..+..+.+.+.+.++++.++++|++++|+|++++.++.++..    +| 
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~   88 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK   88 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence            4689999999887743211  11001101  113334455555555588888999999999999999988753    55 


Q ss_pred             CEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          114 DSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       114 d~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      +.|++....|+.+..   .++..|++++.+ +.+++ +.+|++++++.+++++  ++|++++++||||.+.|   +++|.
T Consensus        89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~---~~~I~  161 (353)
T TIGR03235        89 KHIITSAIEHPAVLEPIRALERNGFTVTYL-PVDES-GRIDVDELADAIRPDT--LLVSIMHVNNETGSIQP---IREIA  161 (353)
T ss_pred             CeeeEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhCCCCC--EEEEEEcccCCceeccC---HHHHH
Confidence            778888777766443   345679999998 77654 4689999999998654  99999999999999999   89999


Q ss_pred             HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH--HHHh-------hc
Q 015890          191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--LLKV-------QD  260 (398)
Q Consensus       191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~--l~~~-------~~  260 (398)
                      ++|+++|+++|+|+++ ++.....  ....+.++++.|.+|++|++|  +|+++.++   +....  +...       ..
T Consensus       162 ~l~~~~~~~~ivD~a~~~g~~~~~--~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~---~~~~~~~~~~~~~~~~~~~~  234 (353)
T TIGR03235       162 EVLEAHEAFFHVDAAQVVGKITVD--LSADRIDLISCSGHKIYGPKG--IGALVIRK---RGKPKAPLKPIMFGGGQERG  234 (353)
T ss_pred             HHHHHcCCEEEEEchhhcCCcccc--ccccCCCEEEeehhhcCCCCc--eEEEEEcc---CcccccccCceeeCCCCcCc
Confidence            9999999999999998 5543222  222345588889999887556  78888884   32211  1111       01


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRW  337 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  337 (398)
                      ....+.+.+...++.++++......++..++++++++.+++.|+..+. ++..++.   ..++.+.++.  .+..++...
T Consensus       235 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~~--~~~~~v~~~  311 (353)
T TIGR03235       235 LRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSIDG--VNSEALIVN  311 (353)
T ss_pred             cccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeCC--cCHHHHHHH
Confidence            124566777777777777753345677788899999999999987544 5553321   2234444442  356677776


Q ss_pred             HHHhcCeEEecCCCCCCC----CeEEEEecCCCHHH
Q 015890          338 LAHRHGVVVIPGGACGCR----GHLRISFGGLVEDD  369 (398)
Q Consensus       338 ll~~~gi~v~~g~~~~~~----~~iRi~~~~~~~~~  369 (398)
                      | ++ +|.+.+|..|...    .++|.+++. +++.
T Consensus       312 L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~  344 (353)
T TIGR03235       312 L-RA-DAAVSTGSACSSSKYEPSHVLQAMGL-DTDR  344 (353)
T ss_pred             H-hC-CeEEEchhhcCCCCCCCCHHHHHcCC-CHHH
Confidence            6 44 9999999988533    368888886 4443

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.94  E-value=1.8e-24  Score=198.42  Aligned_cols=346  Identities=14%  Similarity=0.120  Sum_probs=239.9

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.+  .++ .+|.|.+|+.+++....  .+.......+....+++.|...... ..+.+++++++++|+
T Consensus        53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~  130 (447)
T COG0160          53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--HTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAV  130 (447)
T ss_pred             CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--cccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHH
Confidence            46899999999653  333 69999999999987632  1212222225556666666665554 356799999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHH-hc----------C---cEEEEeccCCC-C--CC--------CCChHHH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MT----------G---VTHILVGPCSS-K--TL--------HPDADWL  155 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~----------g---~~~~~~~~~~~-~--~~--------~~d~e~l  155 (398)
                      +.+++...  .....|+....+|++....+- ..          +   ..+..+ |.+. .  .+        ....+.+
T Consensus       131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~-Pyp~~yr~p~~~~~~~~~~~~~~~~  209 (447)
T COG0160         131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHV-PYPNPYRCPFGIGGEECGDDALEYI  209 (447)
T ss_pred             HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEe-cCCccccCcccCchhhhhHHHHHHH
Confidence            99999864  334689999999988553221 11          1   123333 3221 1  11        1124456


Q ss_pred             HHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccc
Q 015890          156 EKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSF  228 (398)
Q Consensus       156 ~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~  228 (398)
                      +..+.    ....++++++...+...|.+ .|++.++++.++|++||+++|+||++  ++..|..+.....+....+-++
T Consensus       210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~  289 (447)
T COG0160         210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL  289 (447)
T ss_pred             HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEe
Confidence            66443    22337899999889999985 67778999999999999999999999  8888855544433333445588


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccC
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      +|.+| .|+++|.++.+   +++.+ ........++..|+.+.+++.+.|+..+  +.+++..+.-...+++|.+.-++.
T Consensus       290 aK~ig-~G~Pl~avv~r---~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~  364 (447)
T COG0160         290 AKSLG-GGLPLSAVVGR---AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKH  364 (447)
T ss_pred             ccccc-CCCceeEEecc---HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99998 69999999999   78877 5445555678999999999999998522  334444444455566776666677


Q ss_pred             CCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      +.+--+... |+++.+++.+..       .....++.++. ++|+.+..+..  ..+.|||...- .+++++++++++|.
T Consensus       365 ~~IgdVRG~-Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~il~  440 (447)
T COG0160         365 PLIGDVRGL-GLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDILE  440 (447)
T ss_pred             Cceeccccc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHHHH
Confidence            755555566 778877775321       12345666664 89998876532  25789999877 79999999999999


Q ss_pred             HHHHHH
Q 015890          379 RGLEEL  384 (398)
Q Consensus       379 ~~~~~~  384 (398)
                      +++++.
T Consensus       441 ~al~~~  446 (447)
T COG0160         441 EALKEA  446 (447)
T ss_pred             HHHHhh
Confidence            999874

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.94  E-value=2.8e-24  Score=203.93  Aligned_cols=345  Identities=15%  Similarity=0.088  Sum_probs=220.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.  ..+.......+.+..+++.+.+..+.. .+.+++++++++|+
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~--~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  130 (443)
T PRK06058         53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF--THTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAV  130 (443)
T ss_pred             CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence            3588899998764  3333 5899999999998763  222222223456667777776655422 25788999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcC-c-------------EEEEeccCC-CCC----CCC--------ChH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-V-------------THILVGPCS-SKT----LHP--------DAD  153 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-~-------------~~~~~~~~~-~~~----~~~--------d~e  153 (398)
                      +.+++...  ...++|+...++|+++...+-... .             .+..+ +.. ...    ...        ..+
T Consensus       131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  209 (443)
T PRK06058        131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA-PMSYPYRDPKGLATDGEEAAARAIT  209 (443)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc-CCCcccccccccccchHHHHHHHHH
Confidence            99999543  233789999999999875443221 0             11111 110 000    000        122


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccc
Q 015890          154 WLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSK  230 (398)
Q Consensus       154 ~l~~~l~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK  230 (398)
                      .+++.+..+ .+++|+++..+...|.+ .+++.+++|.++|++||+++|.||++  |+..|........+....+.+++|
T Consensus       210 ~l~~~~~~~-~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK  288 (443)
T PRK06058        210 VIEKQVGAD-NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAK  288 (443)
T ss_pred             HHHHhhCCC-ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcc
Confidence            233433323 36888887556556765 56889999999999999999999999  665554332221111112336689


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      .++ +|+++|+++++   +++.+.+.......+++.|+.+++++.+.|+...  +..++..+.-...++.|.+..++.+.
T Consensus       289 ~l~-~G~Pi~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~  364 (443)
T PRK06058        289 GIA-GGLPLSAVTGR---AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDR  364 (443)
T ss_pred             ccc-CCCccEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence            998 89999999999   7888777655556688899999999999997521  22233333333334444444344454


Q ss_pred             CccccCCccEEEEeeCCCC--CCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEK--HLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.-+.+. |.++.+.+...  ...    ...+...++ ++||.+.++..+  .+.||+.+.. .+++++++++++|.+++
T Consensus       365 i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l~~~l  440 (443)
T PRK06058        365 IGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVLEAAL  440 (443)
T ss_pred             EEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence            3335566 55555555321  011    233445444 799999886543  3689998666 79999999999999998


Q ss_pred             HH
Q 015890          382 EE  383 (398)
Q Consensus       382 ~~  383 (398)
                      ++
T Consensus       441 ~~  442 (443)
T PRK06058        441 AD  442 (443)
T ss_pred             Hh
Confidence            65

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.94  E-value=1.5e-24  Score=201.47  Aligned_cols=284  Identities=23%  Similarity=0.197  Sum_probs=198.5

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    +  .+++++++|+++|+..++.+++++||+|+++.|+|.+....+    ...|.++..+ 
T Consensus        49 ~~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~-  121 (382)
T TIGR02080        49 GNPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV-  121 (382)
T ss_pred             CCchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE-
Confidence            4555677777777765    4  467999999999999999999999999999999998655433    3334555554 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++++++++  ++|++++|+||||.+++   +++|.++|+++|+++|+|++| .+....+.   ..+
T Consensus       122 d~------~d~~~l~~ai~~~t--klV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~pl---~~g  187 (382)
T TIGR02080       122 DQ------GDEQALRAALAQKP--KLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQNPL---ALG  187 (382)
T ss_pred             CC------CCHHHHHHhcCcCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhC
Confidence            21      27899999998765  99999999999999999   889999999999999999999 33211111   112


Q ss_pred             cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .+++++|++|.++ .++++.|+++.++  +++++++.......+.+.++...+.+...++    .+..+.++..+++..+
T Consensus       188 aDivv~S~sK~l~G~~~~~~G~i~~~~--~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----tl~~R~~~~~~na~~~  261 (382)
T TIGR02080       188 ADLVLHSCTKYLNGHSDVIAGAVIAKD--PQVAEELAWWANNLGVTGGAFDSYLTLRGLR----TLVARMRLQQRNAQAI  261 (382)
T ss_pred             CCEEEeecceeccCCCCceeEEEEeCC--HHHHHHHHHHHHccCCCCCHHHHHHHHcccc----hHHHHHHHHHHHHHHH
Confidence            3488999999985 4678899988765  7788888777766667777777666544444    3556677788888899


Q ss_pred             HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCe---EEecCCCC-------
Q 015890          300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC-------  352 (398)
Q Consensus       300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~~g~~~-------  352 (398)
                      .+.|+.++.+. |..|.                .+..+.+++...    .+...++++.-.+   .+.-|...       
T Consensus       262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~  337 (382)
T TIGR02080       262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG----EQTVRRFLGGLSLFTLAESLGGVESLIAHPA  337 (382)
T ss_pred             HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc----HHHHHHHHHcCCcceEeccCCCCcceeECCC
Confidence            99998877532 22211                133556666421    2223333333333   22212110       


Q ss_pred             ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                     + .++.||+|++-   |+.+.+++.|.+++.+
T Consensus       338 ~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~~  381 (382)
T TIGR02080       338 TMTHAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLRA  381 (382)
T ss_pred             ccCcccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                           0 13589999997   6677788888888753

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=2.3e-24  Score=200.22  Aligned_cols=287  Identities=23%  Similarity=0.204  Sum_probs=204.6

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+....+++.++++.    +.  +++++++|+++++..++.+++++||+|+++.|+|++....+    ...|.++..+ 
T Consensus        50 ~~pt~~~L~~~lA~l~----g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v-  122 (386)
T PRK08045         50 GNPTRDVVQRALAELE----GG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-  122 (386)
T ss_pred             CCccHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe-
Confidence            4555667777777765    42  46999999999999999999999999999999998644333    2234466555 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +      ..|++.+++.+++++  ++|++++|+||||.+++   +++|.++|+++|+++|+|++| .+....+.   ..+
T Consensus       123 d------~~d~e~l~~~l~~~t--klV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~pl---~~g  188 (386)
T PRK08045        123 D------QGDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQNPL---ALG  188 (386)
T ss_pred             C------CCCHHHHHHhcccCC--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCCch---hhC
Confidence            2      248899999998765  99999999999999999   889999999999999999999 33222221   223


Q ss_pred             cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++ .++...|+++.++  +++++.+.......+.+.+++.++.+...|+.    +..+.+++.+++..+
T Consensus       189 aDivv~S~tK~l~G~~d~~~G~vi~~~--~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----l~~R~~~~~~na~~l  262 (386)
T PRK08045        189 ADLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAI  262 (386)
T ss_pred             CCEEEeecceeccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----HHHHHHHHHHHHHHH
Confidence            3488999999995 4567789988754  67888777666666777888888888888875    677888889999999


Q ss_pred             HHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890          300 REALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-------  352 (398)
Q Consensus       300 ~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-------  352 (398)
                      .+.|++++.+ +|+.|.                .+-.+.+.+..    +.+.+.+++++-.+..   .-|...       
T Consensus       263 a~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~  338 (386)
T PRK08045        263 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG----DEQTLRRFLGGLSLFTLAESLGGVESLISHAA  338 (386)
T ss_pred             HHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC----cHHHHHHHHHhccceeEeccCCCCceeEeCCC
Confidence            9999988753 222210                12345556642    1222233433333321   111110       


Q ss_pred             ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                                     + .++.||+|++-   |+.+.+++.|.+++++..+
T Consensus       339 ~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~~  385 (386)
T PRK08045        339 TMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK  385 (386)
T ss_pred             CcccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhhc
Confidence                           0 13689999997   6778888999988887654

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.94  E-value=2.7e-24  Score=187.65  Aligned_cols=321  Identities=16%  Similarity=0.148  Sum_probs=217.6

Q ss_pred             cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      ++..+++|+++++|.+.-.. ....|+.++....+.+.+++.    ++.  ..++|++++|+++..++.+.+++|+.|++
T Consensus         7 Dn~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~----~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~   79 (342)
T COG2008           7 DNVAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAEL----FGK--EAALFVPSGTQANQLALAAHCQPGESVIC   79 (342)
T ss_pred             CccCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHH----hCC--ceEEEecCccHHHHHHHHHhcCCCCeEEE
Confidence            35557899999999886532 244566555555555555444    454  78999999999999999999999999999


Q ss_pred             eCCCCcChhh--HHHhcC-cEEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          119 FAPYYFNSYM--SFQMTG-VTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       119 ~~p~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      ..-+|-...+  ....++ ...+.+  .+..+..+++|+++..++    ++....++++.+..|..|+++|.++|++|.+
T Consensus        80 ~~~aHi~~~E~Ga~~~~~~~~~~~~--~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~  157 (342)
T COG2008          80 HETAHIYTDECGAPEFFGGGQKLPI--VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISA  157 (342)
T ss_pred             eccccceecccCcHHHHcCCceecc--CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHH
Confidence            9888844332  223333 333333  232345789999999887    2333455555556668899999999999999


Q ss_pred             HHHHcCCEEEEeece----eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCc-
Q 015890          192 LCKAAGSWLVVDNTY----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA-  266 (398)
Q Consensus       192 l~~~~~~~livDe~~----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~-  266 (398)
                      +|+++|+.|++|.+.    ....+.........-+.+..++||..+.|+   |.++..+  .++++....++....... 
T Consensus       158 ~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn--~~~~~~a~~~rK~~Ggl~~  232 (342)
T COG2008         158 VCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGN--RDFAKRARRWRKRAGGLMR  232 (342)
T ss_pred             HHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcC--HHHHHHHHHHHHHhcccHh
Confidence            999999999999999    233343222223334466778899886554   7766665  888888876665444443 


Q ss_pred             -chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeE
Q 015890          267 -SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV  345 (398)
Q Consensus       267 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~  345 (398)
                       .-+..++...+|++  +.......+-...+.+|.+.|...++.++..|..+|.+++.+++...+......++ ...|++
T Consensus       233 k~r~laA~~~~~l~~--~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~-~~~~~~  309 (342)
T COG2008         233 KARFLAAQGLYALED--DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGAL-FYRGVL  309 (342)
T ss_pred             hhhHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchh-heeeee
Confidence             34444445556653  32344455556668899999997766677776669999999986432222223322 245555


Q ss_pred             EecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          346 VIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       346 v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.+++     ..+|+..++ .+++++++++..+++++
T Consensus       310 ~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         310 IGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             ccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            54421     479999999 89999999988887654

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.94  E-value=1.9e-24  Score=203.78  Aligned_cols=330  Identities=12%  Similarity=0.127  Sum_probs=222.0

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.....   .+|++.+++.+++.....  .... ...+....+++.+.+.++  .+.++++++|++|+.
T Consensus        34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e  108 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL--SSRA-FYNDVFGEFAEYVTKLFG--YDKVLPMNTGAEAVE  108 (401)
T ss_pred             CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc--cccc-cCCHHHHHHHHHHHhhcC--CCEEEEeCccHHHHH
Confidence            46888999988754433   489999999998765321  1111 123344455555555445  358999999999999


Q ss_pred             HHHHHhcc---------C-CCEEEEeCCCCcChh-hHHHhcCc------------EEEEeccCCCCCCCCChHHHHHhhc
Q 015890          104 NIVLTLCD---------A-GDSVVMFAPYYFNSY-MSFQMTGV------------THILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus       104 ~~~~~l~~---------~-gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                      .+++.+..         + .+.|+....+|++.. ..+...+-            .+..+ +      ..|++++++.++
T Consensus       109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~le~~l~  181 (401)
T TIGR01885       109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI-P------YNNLEALEEALE  181 (401)
T ss_pred             HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe-C------CCCHHHHHHHHH
Confidence            99998631         2 367888888988743 32332221            11112 1      127889999886


Q ss_pred             c-CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCC
Q 015890          161 T-KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       161 ~-~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~  234 (398)
                      . ....++|+++.+++++|...+ .+.+++|.++|++||+++|+||+|  +++.|......  ....+++  +++|.++.
T Consensus       182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~  259 (401)
T TIGR01885       182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSG  259 (401)
T ss_pred             hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccC
Confidence            2 233678888888999999875 557999999999999999999999  65555432211  1112233  46799985


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Cccc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVK  312 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~  312 (398)
                      +++++|+++.+   +++++.+.......+++.+++.++++.++|+...+  ....++.+++.+++.+.|++++.  +...
T Consensus       260 g~~~ig~v~~~---~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~  334 (401)
T TIGR01885       260 GVYPVSAVLAD---DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKKLPKPIITEV  334 (401)
T ss_pred             CCCCcEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhccCCceeEE
Confidence            56899999998   78887775533344667788888888888875221  12334566667888888877643  1222


Q ss_pred             cCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      .+. +.+..+.++...  .+..+++.+|. ++||.+.|.    .++.+||+++. .+++++++++++|.+++
T Consensus       335 ~g~-g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       335 RGR-GLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT----HGNIIRLAPPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             eec-CeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec----CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence            344 445444454321  14567888775 889999875    36789999876 79999999999998875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.94  E-value=6.4e-24  Score=200.92  Aligned_cols=344  Identities=13%  Similarity=0.064  Sum_probs=222.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.....+  .....+.+..+++.+.+..+...+.++++++|++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e  116 (423)
T PRK05964         39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF--AGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVE  116 (423)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4689999998774  3343 589999999999876321111  0112344556677666554433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCC-CCCChHHHHHhhcc
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKT-LHPDADWLEKTLET  161 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~-~~~d~e~l~~~l~~  161 (398)
                      .+++....       +| .+|+....+|++....+....-             .+..+ +.+.+. ...+++.+++.+..
T Consensus       117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~l~~~l~~  195 (423)
T PRK05964        117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTA-PFPPDGYEQATLDALEALLEK  195 (423)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEe-CCCcchhHHHHHHHHHHHHHh
Confidence            99997641       23 5899999999987654433221             11122 221110 01127888888862


Q ss_pred             -CCCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          162 -KPTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       162 -~~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                       ...+++|+++. .++..|... +++++++|.++|++||+++|+||++  ++..|........+....+.+++|.++.++
T Consensus       196 ~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~  275 (423)
T PRK05964        196 HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGY  275 (423)
T ss_pred             CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCc
Confidence             23367888875 477788754 8999999999999999999999999  655553322121222233447889997333


Q ss_pred             ceeEEEEccCCcHHHHHHHHHh------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      +++|+++.+   +++.+.+...      ....+++.++.+.+++.+.++.  .+++.++..+.....++.+.+. .+.+.
T Consensus       276 ~p~~av~~~---~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l-~~~~~  351 (423)
T PRK05964        276 LPLAATLCT---AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPF-RDLPG  351 (423)
T ss_pred             ccceEEEEc---HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh-ccCCC
Confidence            899999988   7888777431      1234556788888888888874  2234444444444444444432 23333


Q ss_pred             CccccCCccEEEEeeCCCCCC--ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKHL--DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.-.... +.++.+.+.....  ....+...+. ++||.+.+.     .+.+|++++. .+++|+++++++|.++++++
T Consensus       352 i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-----~~~lR~~p~l~~t~edId~~v~~l~~al~~~  423 (423)
T PRK05964        352 VADVRVL-GAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-----GNTIYLMPPYIITAEELDRITDAIVEVADEL  423 (423)
T ss_pred             eEEeecc-cEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence            2223344 5666666653210  1445666664 899999873     2579999886 79999999999999998763

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=1.9e-24  Score=201.64  Aligned_cols=285  Identities=18%  Similarity=0.167  Sum_probs=200.4

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~  141 (398)
                      ..+...++++.++++.    |.  +..++++++++|+..++.+++++||+|+++.|+|.+...    .++..|+++..+ 
T Consensus        62 ~~p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v-  134 (398)
T PRK08249         62 TNPTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC-  134 (398)
T ss_pred             CChHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc-
Confidence            4455577777777776    43  456777777899999999999999999999999987543    355678888776 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++.+++++  ++|++++|+||||.+++   +++|.++|+++|+++|+|++| ..+...+.   ..+
T Consensus       135 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~l---~~~  200 (398)
T PRK08249        135 ET------GDHEQIEAEIAKGC--DLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQNPL---ALG  200 (398)
T ss_pred             CC------CCHHHHHHhcCCCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCCch---hhC
Confidence            32      48999999998765  99999999999999999   889999999999999999999 33322221   123


Q ss_pred             cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++.+|-++ |+++.+   +++++.+.........+.++..++.+...++.    +..+.++..+++..+
T Consensus       201 ~Divv~S~sK~l~g~~~~~gG~vv~~---~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~~l  273 (398)
T PRK08249        201 ADLVIHSATKFLSGHADALGGVVCGS---KELMEQVYHYREINGATMDPMSAYLILRGMKT----LKLRVRQQQESAMAL  273 (398)
T ss_pred             CCEEeccCceecCCCCCceEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHHHH
Confidence            3478899999998666555 666666   78888887776655666677776666555543    566667778888899


Q ss_pred             HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890          300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-------  352 (398)
Q Consensus       300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-------  352 (398)
                      .+.|++++.+. |..|.                .+-.+.+.+..    +.+...+++++-.+..   .-|...       
T Consensus       274 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~  349 (398)
T PRK08249        274 AKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG----GMDTVKRLLPKLRYAHRAANLGAVETIYGPAR  349 (398)
T ss_pred             HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC----CHHHHHHHHHhCCcceEccCCCCCCceeeCCc
Confidence            99998876532 22211                13345556542    1233334444444432   111100       


Q ss_pred             ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                                     + .++.||+|++-   |+.+.+++.|.+++..+.
T Consensus       350 ~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~  395 (398)
T PRK08249        350 TTSHVENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAHLE  395 (398)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHhh
Confidence                           0 13579999997   677788888888887654

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=3.3e-24  Score=198.52  Aligned_cols=287  Identities=19%  Similarity=0.172  Sum_probs=205.3

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  141 (398)
                      +.+....+++.++++.    +  .+++++++|+++++..++.+++++||+|+++.|+|.+....    .+..|++++.+ 
T Consensus        51 ~npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v-  123 (388)
T PRK08861         51 GNPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV-  123 (388)
T ss_pred             CCchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE-
Confidence            4455677777777776    4  47899999999999999999999999999999999864432    33456787777 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++++++++  ++|++++|+||||.+++   +++|.++|+++|+++|+|++| .+....+.   ..+
T Consensus       124 d~------~d~e~l~~~i~~~t--klV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~pl---~~G  189 (388)
T PRK08861        124 DQ------SDAAALDAALAKKP--KLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQKPL---ELG  189 (388)
T ss_pred             CC------CCHHHHHHhcCcCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCCCc---ccC
Confidence            32      38899999998765  99999999999999999   888999999999999999999 33222221   223


Q ss_pred             cEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++. .+...|+++.++  +++.+.+...+...+...+++..+.+...|+.    +.-+.+++.+++..+
T Consensus       190 aDivv~S~tK~l~G~~d~~gG~i~~~~--~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----l~lR~~~~~~~a~~~  263 (388)
T PRK08861        190 ADFVIHSTTKYINGHSDVIGGVLITKT--KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMRVHEESAQQI  263 (388)
T ss_pred             CCEEEeecceeccCCCcceeEEEEecH--HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----HHHHHHHHHHHHHHH
Confidence            45889999999963 346789988764  56777777666666667778877766666665    667777888888899


Q ss_pred             HHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890          300 REALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-------  352 (398)
Q Consensus       300 ~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-------  352 (398)
                      .+.|+++|.+ +|..|.                .+-.+.+.+..    +.+...++++.-.+..   .-|..-       
T Consensus       264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~  339 (388)
T PRK08861        264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG----SFEQLKVFVKALALFSLAESLGGVESLICHPA  339 (388)
T ss_pred             HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC----CHHHHHHHHhcCCcceEccCCCCCcceeeCCC
Confidence            9999887753 222221                13345566642    1233334443333322   111100       


Q ss_pred             ---------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          353 ---------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       353 ---------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                                     + .++.||+|++-   |+.+.+++.|.++++++.+
T Consensus       340 ~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~~~~  386 (388)
T PRK08861        340 SMTHRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAKAAE  386 (388)
T ss_pred             cccccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHh
Confidence                           0 13579999997   6778888999999887765

>PRK06460 hypothetical protein; Provisional

Probab=99.94  E-value=6.9e-24  Score=196.93  Aligned_cols=283  Identities=20%  Similarity=0.163  Sum_probs=191.6

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCc----ChhhHHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF----NSYMSFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~----~~~~~~~~~g~~~~~~~~  142 (398)
                      .+...++++.++++.    +.+ ..+++ +++++++..++.+++++||+|+++.+.|.    .+...++..|+++..+ +
T Consensus        44 ~p~~~~L~~~lA~l~----g~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~-~  116 (376)
T PRK06460         44 NPTVLELTKKIVELE----NAE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS-N  116 (376)
T ss_pred             CccHHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE-C
Confidence            466677888888876    443 34554 55569999999999999999999987664    3446678889998877 5


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .+      +.+.+++.++++  +++|++++|+||||.+++   +++|+++|+++|+++|+|++| ......+   ...+.
T Consensus       117 ~~------~~~~l~~~~~~~--tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~~~~---l~~~~  182 (376)
T PRK06460        117 PG------SDNIIEKAKSKR--YDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPINQKP---LELGA  182 (376)
T ss_pred             CC------CHHHHHHhcCCC--ceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccccCCh---hhcCC
Confidence            43      223455555554  499999999999999999   778899999999999999999 3332211   12345


Q ss_pred             EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|+||.++. .+.++||++.+   +++++.+......++.+.++..   +..+++ +.++++.+.+++.++++++.
T Consensus       183 divv~S~sK~l~G~~~~~~G~~~~~---~~l~~~l~~~~~~~g~~~~~~~---a~~~l~-~~~~l~~r~~~~~~n~~~l~  255 (376)
T PRK06460        183 DIVVHSASKFLAGHNDVIAGLAAGY---GKLLNVIDQMRRTLGTSLDPHA---AYLTLR-GIKTLKIRMDVINRNAEQIA  255 (376)
T ss_pred             CEEEeecceeccCCCCceEEEEecC---HHHHHHHHHHHHhcCCCCCHHH---HHHHHh-chhhHHHHHHHHHHHHHHHH
Confidence            6899999999952 23679999988   7888888877665555544432   223333 35677888889999999999


Q ss_pred             HHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---C----------C
Q 015890          301 EALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G----------G  350 (398)
Q Consensus       301 ~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g----------~  350 (398)
                      +.|++.+.+ +++.|                ..|-.+.+.+...    .+...++++.-.+....   |          +
T Consensus       256 ~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~----~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~  331 (376)
T PRK06460        256 EFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG----QESALKVMKSLKLIIPAQTLGGVNSVISHPAT  331 (376)
T ss_pred             HHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc----HHHHHHHHHhCCcceeccCCCCCceEEeCccc
Confidence            999987653 22222                1133455566421    22233344333321111   1          0


Q ss_pred             C----C--------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          351 A----C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       351 ~----~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .    +        + .++.||+|++-   |+.+.+++.|.+++..+
T Consensus       332 ~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~  375 (376)
T PRK06460        332 MSHRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL  375 (376)
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence            0    0        0 13579999997   67778888888888653

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.94  E-value=4.7e-24  Score=199.40  Aligned_cols=284  Identities=21%  Similarity=0.221  Sum_probs=194.9

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |.+.  .+++++++.++..++.+++++||+|+++.+.|.++...    ++..|++++.+ 
T Consensus        63 ~~p~~~~Le~~lA~l~----G~~~--~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-  135 (398)
T PRK07504         63 SNPTVDMFEKRMCALE----GAED--ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV-  135 (398)
T ss_pred             CCchHHHHHHHHHHHh----CCCe--eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE-
Confidence            4455677888888776    5543  34577888999888888899999999999999875443    35678888887 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +      .+|++.+++++++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| .+....+   ...+
T Consensus       136 d------~~d~e~l~~ai~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~~---~~~g  201 (398)
T PRK07504        136 D------GLDLDNWEKAVRPNT--KVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQKP---LELG  201 (398)
T ss_pred             C------CCCHHHHHHhcCcCc--eEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCCc---hhhC
Confidence            3      258999999998765  99999999999999999   899999999999999999999 3332211   1224


Q ss_pred             cEEEEcccccccCCCcceeE-EEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      .++++.|++|.++.+|.++| +++.+   ++.+. .+.........++++...+.+...|+.    +..+.++..++...
T Consensus       202 aDivv~S~sK~l~g~g~~~GG~vv~~---~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~  274 (398)
T PRK07504        202 AHIVVYSATKHIDGQGRCLGGVVLSD---KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAA  274 (398)
T ss_pred             CCEEEeeccccccCCccceEEEEEeC---cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHH
Confidence            56889999999988898886 55565   44443 344333333455666666666666554    56667777788888


Q ss_pred             HHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe---cCCCC------
Q 015890          299 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC------  352 (398)
Q Consensus       299 l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~---~g~~~------  352 (398)
                      +.+.|+.++.+. |..|                ..+..+.+++...    .+...+++++-.+.-.   -|...      
T Consensus       275 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~~~~~l~~~~~~~slG~~~sl~~~p  350 (398)
T PRK07504        275 IADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG----KEAAFRFLNALKIVRISNNLGDAKSLITHP  350 (398)
T ss_pred             HHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC----HHHHHHHHHhCCcceecccCCCCCeeeeCC
Confidence            888888776532 2211                1144566677421    2333334433343322   11110      


Q ss_pred             ----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                      + .++.||+|++-   |+.+.+++.|.+++.+.
T Consensus       351 ~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~  396 (398)
T PRK07504        351 ATTTHKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKKV  396 (398)
T ss_pred             CCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                            0 13579999997   66777888888888754

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=5.8e-24  Score=198.62  Aligned_cols=281  Identities=22%  Similarity=0.177  Sum_probs=191.1

Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCC
Q 015890           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLH  149 (398)
Q Consensus        74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~  149 (398)
                      .+.+.+.+.++.+. ++. ++++|+++++..++.+++++||+|+++.|.|.+    +...++..|.+++.+ +.      
T Consensus        62 ~~~Le~~lA~l~g~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v-~~------  132 (405)
T PRK08776         62 RDLLGEALAELEGG-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA-DL------  132 (405)
T ss_pred             HHHHHHHHHHHhCC-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE-CC------
Confidence            33444444444454 344 455666799999999999999999999999987    334455668888877 43      


Q ss_pred             CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc
Q 015890          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF  228 (398)
Q Consensus       150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~  228 (398)
                      .|++.+++.+++++  ++|++++|+||||.+.+   +++|+++|+++|+++|+|++| .+....+   ...+.++++.|.
T Consensus       133 ~d~~~l~~~i~~~t--klV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~~~p---l~~gaDivv~S~  204 (405)
T PRK08776        133 TDPRSLADALAQSP--KLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPALQKP---LEFGADLVLHST  204 (405)
T ss_pred             CCHHHHHHhcCcCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccccCCc---ccccCCEEEecC
Confidence            27889999998654  99999999999999988   999999999999999999999 3321111   122334888999


Q ss_pred             ccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          229 SKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       229 sK~~~~~-G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      +|.++.+ +...|+++.++  +++.+++.........+.+++.++++...++    +++.+.+...+++..+.+.|++++
T Consensus       205 tK~l~g~~~~~~G~vv~~~--~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~----tl~~r~~~~~~na~~la~~L~~~p  278 (405)
T PRK08776        205 TKYINGHSDVVGGAVVARD--AELHQQLVWWANALGLTGSPFDAFLTLRGLR----TLDARLRVHQENADAIAALLDGHA  278 (405)
T ss_pred             ceeecCCCCceEEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC----cHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999744 46789888765  6777777665554455667777766665554    477888888999999999998877


Q ss_pred             CCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC---------------
Q 015890          308 EGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC---------------  352 (398)
Q Consensus       308 ~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~---------------  352 (398)
                      .+. |..|                ..+-.+.+.+..    +.+.+.+++++-.+..   .-|...               
T Consensus       279 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~  354 (405)
T PRK08776        279 AVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG----GEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMT  354 (405)
T ss_pred             CeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC----CHHHHHHHHHhCCcceEccCCCCCceEEECCcccccccCC
Confidence            532 2221                113355566642    1233334444444322   111110               


Q ss_pred             -------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 -------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 -------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                             + .++.||+|++-   |+.+.+++.|.+++.++
T Consensus       355 ~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~~  391 (405)
T PRK08776        355 AEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLARA  391 (405)
T ss_pred             HHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence                   0 13579999997   55666677777777654

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.94  E-value=4.7e-24  Score=199.72  Aligned_cols=286  Identities=20%  Similarity=0.208  Sum_probs=195.2

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |.+  ..++++|+++|+..++.+++++||+|+++.|.|....    ..++..|++++.+ 
T Consensus        63 ~~p~~~~le~~lA~l~----g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v-  135 (403)
T PRK07503         63 SNPTLALLEQRMASLE----GGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV-  135 (403)
T ss_pred             CCchHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEe-
Confidence            3445667777777765    543  3566777889999999999999999999999986533    3456789998888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| .++...+.   ..+
T Consensus       136 d~~------d~~~l~~~i~~~t--klV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~~l---~~g  201 (403)
T PRK07503        136 DLT------DPAALKAAISDKT--RMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQRPL---ELG  201 (403)
T ss_pred             CCC------CHHHHHHhcCccC--cEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhC
Confidence            542      7899999998765  99999999999999999   899999999999999999999 44433222   123


Q ss_pred             cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      .+++++|++|.++.+| .+.|+++.+   ++++++++..  ......++++..++.+...|+.    +..+.++..++..
T Consensus       202 ~Di~v~S~tK~l~g~gd~~gG~v~~~---~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~  274 (403)
T PRK07503        202 ADLVVHSATKYLGGHGDITAGLVVGG---KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT----LALRMDRHCASAQ  274 (403)
T ss_pred             CCEEEccccccccCCCceeEEEEEcC---HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHH
Confidence            4588999999998655 778998866   7788877632  3333456666666555555543    5566666677888


Q ss_pred             HHHHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe---cCCCC-----
Q 015890          298 IIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC-----  352 (398)
Q Consensus       298 ~l~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~---~g~~~-----  352 (398)
                      .+.+.|++++.+. +..|.                .+-.+.+.+..+    .+...++..+..++..   -|...     
T Consensus       275 ~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~----~~~~~~~~~~l~l~~~~~slG~~~sl~~~  350 (403)
T PRK07503        275 AVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG----IAAGRRFMNALQLFARAVSLGDAESLAQH  350 (403)
T ss_pred             HHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC----HHHHHHHHHhCCcceeecccCCCCccCcC
Confidence            8888888776532 21110                122344455421    2222333333333211   11100     


Q ss_pred             -----C-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          353 -----G-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       353 -----~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                           +             .++.||||++-   |+.+.+++.|.+++.....
T Consensus       351 ~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al~~~~~  399 (403)
T PRK07503        351 PASMTHSTYTPEERAEHGISEGLVRLSVGL---EDVADILADLAQALDACAV  399 (403)
T ss_pred             CCCCccccCCHHHHHhcCCCCCeEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence                 0             13579999997   6777888888888876543

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.94  E-value=1.5e-23  Score=195.01  Aligned_cols=355  Identities=12%  Similarity=0.040  Sum_probs=247.4

Q ss_pred             ccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus        13 ~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      ..+...+..+.+.....++.++|--..|.  .+|.+++++...+.+.-.      -.|+-.....+++....+..++.++
T Consensus        32 ~~d~~~~~~~~~e~~rq~~~l~LiasEN~--~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~  109 (493)
T PRK13580         32 HVEPRIAEAIRQELADQRSSLKLIASENY--SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG  109 (493)
T ss_pred             hhCHHHHHHHHHHHHHHhcCceEeccccc--CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC
Confidence            45667777777777777899999988776  479999988776654211      2233355667788888888888899


Q ss_pred             CCCCcEEEecChHHHHHHHHHHhccC-------------------------------CCEEEEeCCCCcChhhH---HHh
Q 015890           87 LYKSSVMVTAGANQAFVNIVLTLCDA-------------------------------GDSVVMFAPYYFNSYMS---FQM  132 (398)
Q Consensus        87 ~~~~~v~~~~g~t~a~~~~~~~l~~~-------------------------------gd~Vl~~~p~~~~~~~~---~~~  132 (398)
                      .+.-+|-.-+|+ .|+..++.++++|                               ||+|+..+..+.++...   ...
T Consensus       110 a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~  188 (493)
T PRK13580        110 AEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNI  188 (493)
T ss_pred             CCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccch
Confidence            888788877766 8999999999876                               79999887776554321   122


Q ss_pred             cC--cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc
Q 015890          133 TG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY  209 (398)
Q Consensus       133 ~g--~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~  209 (398)
                      .|  .+...+ +.+.....+|++.+++.+++.+  +.|+++..+|- |...|   +++|.++|+++|+++++|++| ++.
T Consensus       189 ~~~~~~~~~y-~vd~~~g~iD~d~l~~~~~~~~--plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gl  261 (493)
T PRK13580        189 SGKMFHQRSY-GVDPDTGLLDYDEIAALAREFK--PLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGL  261 (493)
T ss_pred             hhheeeeEec-ccCcccCccCHHHHHHHHhhcC--CEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhce
Confidence            22  456666 6776556799999999999876  56666666665 44778   999999999999999999999 443


Q ss_pred             CCCcc-----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-Cch
Q 015890          210 DGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPE  283 (398)
Q Consensus       210 ~~~~~-----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  283 (398)
                      -+...     ... .+.+++++|+||++.  |.+.|+++++   +++++.+.........++.++..++...++.. ...
T Consensus       262 igg~~~~~~~~~~-~~~D~vtgT~hKaL~--GP~GG~I~~~---~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~  335 (493)
T PRK13580        262 VAGKVFTGDEDPV-PHADIVTTTTHKTLR--GPRGGLVLAK---KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTP  335 (493)
T ss_pred             eccccchhhcCCC-CCCcEEEeCChhhcc--CCCeEEEEec---HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCc
Confidence            22111     111 234588999999983  3445899988   78888775444333344555555555555543 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC------CCe
Q 015890          284 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGH  357 (398)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~  357 (398)
                      ...++++++.++.++|++.|.+.|+..+.+...+..+++.+.... .....+.+.|.+.||.+.+-..+..      +..
T Consensus       336 ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~-~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~sr  414 (493)
T PRK13580        336 EFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG-LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSG  414 (493)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH-HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCce
Confidence            236678899999999999999888733333333677777876432 1233444455699999976554321      467


Q ss_pred             EEEEecC-C----CHHHHHHHHHHHHHHHHHH
Q 015890          358 LRISFGG-L----VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       358 iRi~~~~-~----~~~~~~~~~~~l~~~~~~~  384 (398)
                      |||++.. +    +++|++++++.|.++++..
T Consensus       415 LRIg~~A~ttrg~teedi~~iad~l~~~l~~~  446 (493)
T PRK13580        415 IRLGTPALTTLGMGSDEMDEVAELIVKVLSNT  446 (493)
T ss_pred             EEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence            9999775 2    4789999999999888754

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.94  E-value=2.4e-23  Score=193.51  Aligned_cols=326  Identities=16%  Similarity=0.136  Sum_probs=226.0

Q ss_pred             CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCc----HHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGL----PELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~----~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      ++++++|+.++ -.+..+|++.++..+.+.+...+.-+  ...|.    .++++.+++++    +  .+..++++++..|
T Consensus       101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g--~e~all~sSGy~A  174 (476)
T PLN02955        101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K--KEDCLVCPTGFAA  174 (476)
T ss_pred             CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C--CCcEEEECChHHH
Confidence            35789999876 45668999999998888664322111  11233    56777777776    3  4667888888899


Q ss_pred             HHHHHHHhc--------------cCCCEEEEeCCCCcChhhHHHhc----CcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890          102 FVNIVLTLC--------------DAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus       102 ~~~~~~~l~--------------~~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      +..++.++.              ++++.|+...-.|.+....++..    +++++.+ +      +-|+++|+++++..+
T Consensus       175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f-~------HND~~~Le~~L~~~~  247 (476)
T PLN02955        175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVY-R------HCDMYHLNSLLSSCK  247 (476)
T ss_pred             HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEe-C------CCCHHHHHHHHHhCC
Confidence            999998872              45567888888898888887765    4666666 2      238999999986322


Q ss_pred             -CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece----eccCCCccc---cccCCcEEEEcccccccCCC
Q 015890          164 -TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHC---CVEGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       164 -~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~----~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~  235 (398)
                       ..++|+++...++.|.+.|   +++|.++|++||+++|+||+|    ++..|....   ....+.+++++|++|++|+.
T Consensus       248 ~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~  324 (476)
T PLN02955        248 MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH  324 (476)
T ss_pred             CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence             2356666677899999999   999999999999999999999    333332221   11246779999999999776


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCC--CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPI--CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      |   |+++++   +++++.+........+  ..+++..+++.++++.... ...+++++.++.+++++.+   |. .+  
T Consensus       325 G---Gfi~gs---~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~-~~~~r~~L~~n~~~fr~~~---G~-~~--  391 (476)
T PLN02955        325 G---GFIACS---KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK-EKWRRKAIWERVKEFKALS---GV-DI--  391 (476)
T ss_pred             C---ceeecH---HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhc---CC-CC--
Confidence            6   999998   7788877755443222  3344455555566654211 1245667777777887742   33 22  


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                        .+.++.+.+... ....++..+|+ ++||++.+..++.-   ...+||+++. .+++|++++++.|.++......+
T Consensus       392 --~sPI~pI~ig~~-~~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~~  465 (476)
T PLN02955        392 --SSPIISLVVGNQ-EKALKASRYLL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTA  465 (476)
T ss_pred             --CCCEEEEEeCCH-HHHHHHHHHHH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcce
Confidence              144454555432 24556677775 88999988776543   3469999998 89999999999999887766543

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.94  E-value=1.7e-23  Score=195.62  Aligned_cols=285  Identities=20%  Similarity=0.188  Sum_probs=197.2

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |  .++.+++++++.|+..++.+++++||+|+++...|.+    +...++..|++++.+ 
T Consensus        68 ~~p~~~~le~~lA~l~----g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v-  140 (403)
T PRK07810         68 GNPTVSMFEERLRLIE----G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV-  140 (403)
T ss_pred             CCchHHHHHHHHHHHh----C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE-
Confidence            4455667777777765    4  3467888888899999999999999999998866644    345567789999988 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++++++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .+....+.   ..+
T Consensus       141 d~------~d~~~l~~ai~~~t--klV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~~~---~~g  206 (403)
T PRK07810        141 DG------EDLSQWEEALSVPT--QAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQRGL---PLG  206 (403)
T ss_pred             CC------CCHHHHHHhcCcCc--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hcC
Confidence            43      28899999998765  99999999999999999   999999999999999999999 44322221   223


Q ss_pred             cEEEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      .++++.|++|.++..|.++ |+++++   ++.+. .+.........++++..++.+...|+.    +..+.++..++..+
T Consensus       207 aDivv~S~tK~l~g~g~~~gG~v~~~---~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----l~~R~~~~~~~a~~  279 (403)
T PRK07810        207 ADVVVYSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----LALRVRHSNASALR  279 (403)
T ss_pred             CcEEEccCCceecCCcCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHH
Confidence            4688999999998677776 778777   44443 455444444556777877777776665    66777778888888


Q ss_pred             HHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCe-------------EEec
Q 015890          299 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV-------------VVIP  348 (398)
Q Consensus       299 l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi-------------~v~~  348 (398)
                      +.+.|++++.+. |..|                ..+-.+.+.+........+...+++++-.+             ...|
T Consensus       280 ~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p  359 (403)
T PRK07810        280 IAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHP  359 (403)
T ss_pred             HHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCC
Confidence            888888877532 3322                124455566643110123333344433222             2223


Q ss_pred             CCC----C--------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          349 GGA----C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       349 g~~----~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ++.    +        + .++.+|+|++-   |+.+.+++.|.+++
T Consensus       360 ~~~~h~~~~~~~~~~~gi~~~lvR~svGl---E~~~dli~dl~~Al  402 (403)
T PRK07810        360 ATTTHRAMGPEGRAAIGLGDGVVRLSVGL---EDTDDLIADLDRAL  402 (403)
T ss_pred             CccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence            221    0        0 13579999997   66777777777765

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.94  E-value=1.5e-23  Score=193.92  Aligned_cols=290  Identities=17%  Similarity=0.133  Sum_probs=204.3

Q ss_pred             CCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCc
Q 015890           62 SKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGV  135 (398)
Q Consensus        62 ~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~  135 (398)
                      +.|+.  .+....+++.++++.    +  .+++++++|+++|+..++.+++++||+|++++|.|.++...    ++..|+
T Consensus        53 ~~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi  126 (394)
T PRK09028         53 MFYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGI  126 (394)
T ss_pred             ceecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcce
Confidence            44655  344568888888764    2  24789999999999999999999999999999999777643    356788


Q ss_pred             EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc
Q 015890          136 THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH  214 (398)
Q Consensus       136 ~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~  214 (398)
                      ++..+ +..      +.+.+++.+++++  ++|++++|+||||.+.+   +++|+++|+++|+++++|++| .+..   .
T Consensus       127 ~v~~v-~~~------~~e~l~~~l~~~T--klV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~~---~  191 (394)
T PRK09028        127 ETTYY-DPM------IGEGIRELIRPNT--KVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPIN---S  191 (394)
T ss_pred             EEEEE-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCcccccc---C
Confidence            88776 321      4578899888765  99999999999998877   999999999999999999999 4331   1


Q ss_pred             ccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHH
Q 015890          215 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  293 (398)
Q Consensus       215 ~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  293 (398)
                      .+...+.++++.|.+|+++ .+..-.|+++.+   +++.+.+.........+.++...+.+...|+.    +.-+.+++.
T Consensus       192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~  264 (394)
T PRK09028        192 RPFEMGVDISIQAATKYIVGHSDVMLGTATAN---EKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT----LGVRLAQHE  264 (394)
T ss_pred             CccccCceEEEEeCCeEecCCCCEEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHH
Confidence            1223456799999999994 345677887766   66667666555545667777777766666665    677788889


Q ss_pred             HHHHHHHHHhccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-
Q 015890          294 RNREIIREALSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-  352 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-  352 (398)
                      +++..+.+.|++++.+ +|..|                ..+-.+.+.+...   +.+...+++++-.+..   .-|... 
T Consensus       265 ~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~---~~~~~~~f~~~l~l~~~~~slG~~~s  341 (394)
T PRK09028        265 KNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQG---DPKAVTALVEGMQHFKMGFSWGGFES  341 (394)
T ss_pred             HHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCC---CHHHHHHHHHhCCcceEecccCCCcc
Confidence            9999999999988753 33322                1133455566421   1233334444333222   111100 


Q ss_pred             -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                                       + .++.||+|++-   |+.+.+++.|.+++.++.
T Consensus       342 Lv~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~~~  389 (394)
T PRK09028        342 LILGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFERYN  389 (394)
T ss_pred             eeECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHH
Confidence                             0 12579999997   567777888888887654

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.94  E-value=1.2e-23  Score=194.86  Aligned_cols=278  Identities=22%  Similarity=0.185  Sum_probs=194.9

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+...+++++++++.       .++.++++++++++..++.+++++||+|+++.|+|+++...+    +..|++++.+ 
T Consensus        49 ~~p~~~~Le~~lA~l~-------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v-  120 (366)
T PRK07582         49 SNPTWRALEAALGELE-------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA-  120 (366)
T ss_pred             CCccHHHHHHHHHHHc-------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEE-
Confidence            6677788888888875       234566667778999999999999999999999998876543    4579999988 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.++..     +    .+.++  +++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| ... +.....  .+
T Consensus       121 ~~~~~~-----~----~~~~~--t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~~p~~--~g  183 (366)
T PRK07582        121 PTAGMA-----E----AALAG--ADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQRPLE--LG  183 (366)
T ss_pred             CCCChH-----H----HhccC--ceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-ccCchh--cC
Confidence            553221     1    22233  499999999999999888   999999999999999999998 322 221111  23


Q ss_pred             cEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .+++++|++|.++ .+|+++||++.++  +++++.+.........+++++..+.+...++.    +..+.++..++...+
T Consensus       184 ~Divv~S~sK~l~G~~g~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----l~~R~~~~~~na~~l  257 (366)
T PRK07582        184 ADLVVASDTKALTGHSDLLLGYVAGRD--PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----LGLRFARQCANALAV  257 (366)
T ss_pred             CcEEEecccccccCCCCeeEEEEEcCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----HHHHHHHHHHHHHHH
Confidence            3488899999994 4679999999864  67888887766655566677776666666654    456667777888889


Q ss_pred             HHHhccCCCCc-ccc------C----------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------
Q 015890          300 REALSPLGEGA-VKG------G----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------  353 (398)
Q Consensus       300 ~~~l~~~~~~~-~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---------  353 (398)
                      .+.|++++.+. +..      |          ..+-.+.+.+.    +. +...+++++.++.....+ ++         
T Consensus       258 a~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~-~~~~~~~~~l~~~~~~~s-~G~~~sl~~~~  331 (366)
T PRK07582        258 AELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DA-AAAERFVAASRLVVAATS-FGGVHTSADRR  331 (366)
T ss_pred             HHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CH-HHHHHHHHhCCcceeccc-CCCccchhhhH
Confidence            99998877632 221      1          02334555664    23 334445567776653111 11         


Q ss_pred             -------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 -------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                             .++.||+|++.   |+.+.+++.|.++++.
T Consensus       332 ~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~  365 (366)
T PRK07582        332 ARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA  365 (366)
T ss_pred             HHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                   13579999997   4556677777777754

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=7.5e-24  Score=197.53  Aligned_cols=283  Identities=21%  Similarity=0.163  Sum_probs=193.0

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    +.+  ..++++++++|+..++.+++++||+|+++.|+|.+....+    +..|+++..+ 
T Consensus        59 ~~p~~~~Le~~lA~~~----g~~--~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~-  131 (388)
T PRK07811         59 GNPTRTALEEQLAALE----GGA--YGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV-  131 (388)
T ss_pred             CCccHHHHHHHHHHHh----CCC--ceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe-
Confidence            4567788888888887    332  2344566789999999999999999999999998654433    3357777776 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.      .|++.+++.+++++  ++|++++|+||+|...+   +++|.++|+++|+++|+|++| .+....+.   ..+
T Consensus       132 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~p~---~~g  197 (388)
T PRK07811        132 DL------SDLDAVRAAITPRT--KLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQPL---ALG  197 (388)
T ss_pred             CC------CCHHHHHHhcCcCC--eEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCCch---hhC
Confidence            33      38899999998765  99999999999999888   999999999999999999999 44322222   123


Q ss_pred             cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++.+| .+.||+++++  +++.+.+...........++...+.+...|+.    +..+.++..++...+
T Consensus       198 aDivv~S~sK~l~g~~~~~gG~vv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----l~~R~~~~~~na~~l  271 (388)
T PRK07811        198 ADVVVHSTTKYIGGHSDVVGGALVTND--EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----LAVRMDRHSENAEAV  271 (388)
T ss_pred             CcEEEecCceeecCCCCcEEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHH
Confidence            4588999999997543 5679988875  66777676555443444555554444444443    556667778888889


Q ss_pred             HHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-------
Q 015890          300 REALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-------  352 (398)
Q Consensus       300 ~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-------  352 (398)
                      .+.|+.++.+. ++.|.                .|-.+.+.+...    .+...+++++-.+..   .-|...       
T Consensus       272 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~  347 (388)
T PRK07811        272 AEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG----EEAARDFCARTKVFTLAESLGGVESLIEHPS  347 (388)
T ss_pred             HHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC----HHHHHHHHHhCCcceeeccCCCCcceEeCCc
Confidence            99998877532 22211                133556676421    222333444434322   111100       


Q ss_pred             ------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          353 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       353 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                                  + .++.||+|++-   |+.+.+++.|.+++.
T Consensus       348 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~  387 (388)
T PRK07811        348 AMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG  387 (388)
T ss_pred             ccCcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence                        0 13579999997   566777788877764

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=6.8e-24  Score=197.26  Aligned_cols=283  Identities=22%  Similarity=0.193  Sum_probs=196.6

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcCcEEEEecc
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGP  142 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~  142 (398)
                      ..+...++++.+++++    |  .+++++++|+++|+..++.+++++||+|+++.+.|.+....+   +..|+++..+ .
T Consensus        51 ~np~~~~lE~~lA~l~----g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-~  123 (385)
T PRK08574         51 ENPTLRPLEEALAKLE----G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-Y  123 (385)
T ss_pred             CCccHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE-C
Confidence            3456678888888886    4  356788899999999999999999999999999998876655   4457777665 2


Q ss_pred             CCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          143 CSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                             +|++.+++++++ +  +++|++++|+||||.+++   +++|+++|+++|+++|+|++| .+....+.   ..+
T Consensus       124 -------~d~~~l~~~i~~~~--tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~~l---~~G  188 (385)
T PRK08574        124 -------PSTEDIIEAIKEGR--TKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLYRPL---RHG  188 (385)
T ss_pred             -------CCHHHHHHhcCccC--ceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hhC
Confidence                   367899999986 5  499999999999999999   889999999999999999999 44322211   234


Q ss_pred             cEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++.+|-. .|+++.++  +++.+++.......+.++++...+.+...++.    +..+.++..+++..+
T Consensus       189 aDivv~S~sK~l~g~~d~~gG~vi~~~--~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----L~~R~~~~~~na~~l  262 (385)
T PRK08574        189 ADFVVHSLTKYIAGHNDVVGGVAVAWS--GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----LEVRFERQCRNAMAI  262 (385)
T ss_pred             CcEEEeeCceeecCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHHHHHHHH
Confidence            568899999999755533 47666654  67778777666545555666555555555543    566667777788888


Q ss_pred             HHHhccCCCCc-cccC------------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890          300 REALSPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-----  352 (398)
Q Consensus       300 ~~~l~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-----  352 (398)
                      .+.|+.++.+. |..|                  ..|..+.+++..    +.+.+.+++++-.+..   .-|...     
T Consensus       263 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~----~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~  338 (385)
T PRK08574        263 AEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG----GRDAVLKFLRSLKLIKPSPSLGGVESLATY  338 (385)
T ss_pred             HHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC----CHHHHHHHHHcCCcceEccCCCCCcceeeC
Confidence            88888776532 2211                  023455566642    1233334444444432   111111     


Q ss_pred             -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                       + .++.||+|++-   |+.+.+++.|.+++.+
T Consensus       339 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~  384 (385)
T PRK08574        339 PVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS  384 (385)
T ss_pred             CCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence                             0 13579999997   6677788888888754

>TIGR01814 kynureninase kynureninase

Probab=99.93  E-value=2.2e-23  Score=196.86  Aligned_cols=328  Identities=14%  Similarity=0.025  Sum_probs=216.7

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcC---CCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~---~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      ++++.|+.+... +.|+.+.+++.+++..   .....+.. ......+.+.+.+ + ++++.++++|++++|+|++++.+
T Consensus        26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~  102 (406)
T TIGR01814        26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL  102 (406)
T ss_pred             CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence            668999977655 4588999988876542   11111111 1122223333333 3 55688899999999999999999


Q ss_pred             HHHhccCC---CEEEEeCCCCcChh----hHHHhcCcEE----EEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCC
Q 015890          106 VLTLCDAG---DSVVMFAPYYFNSY----MSFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNP  173 (398)
Q Consensus       106 ~~~l~~~g---d~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p  173 (398)
                      +.++.+++   +.|++...+|++..    ..++..|+++    +.+ +.+. ++.+|++.+++.++. .+++++|+++++
T Consensus       103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~-~g~~~~~~l~~~~~~~~~~t~lv~~~~v  180 (406)
T TIGR01814       103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQI-EPRE-EETLRLEDILDTIEKNGDDIAVILLSGV  180 (406)
T ss_pred             HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEe-ccCC-CCccCHHHHHHHHHhcCCCeEEEEEecc
Confidence            99986554   36788888997733    3445678876    445 4433 345789999888852 123589999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~  251 (398)
                      +|.||.++|   +++|+++|+++|+++++|+++ ++.....  ....+.+++++|.+|+++ .||  .|..+.+   +. 
T Consensus       181 ~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~id--~~~~gvD~~~~s~hK~l~g~pG--~~l~v~~---~~-  249 (406)
T TIGR01814       181 QYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVPLD--LHDWGVDFACWCTYKYLNAGPG--AGAFVHE---KH-  249 (406)
T ss_pred             ccccceecC---HHHHHHHHHHcCCEEEEEcccccCCcccc--cccCCCCEEEEcCccccCCCCC--eEEEEeh---hh-
Confidence            999999999   999999999999999999999 6543322  222345688999999884 344  3333333   22 


Q ss_pred             HHHHHHhhc-----------------------cCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccC-
Q 015890          252 ATQLLKVQD-----------------------NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPL-  306 (398)
Q Consensus       252 ~~~l~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~-  306 (398)
                      ...+.....                       ....+++.+...++.++++.. ...+++..++...+.+++++.|++. 
T Consensus       250 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~  329 (406)
T TIGR01814       250 AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARC  329 (406)
T ss_pred             hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            212211100                       012456777777777777652 2235677777888888888888764 


Q ss_pred             ---CCCccccCCc----cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHH
Q 015890          307 ---GEGAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRL  377 (398)
Q Consensus       307 ---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l  377 (398)
                         +++.+..+..    +..+.+.++   .+..++...|. ++||.+...    .++.||+|+ +. ++++|+++++++|
T Consensus       330 ~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~-~~gi~v~~~----~~~~iRiS~~~~~nt~~did~l~~~l  401 (406)
T TIGR01814       330 GGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALI-KRGVIGDKR----EPSVIRVAPVPLYNTFVDVYDAVNVL  401 (406)
T ss_pred             CCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHH-HCCEEEecc----CCCeEEEechhccCCHHHHHHHHHHH
Confidence               2345554321    234555665   24667777774 789988532    357899998 44 7999999999999


Q ss_pred             HHHH
Q 015890          378 RRGL  381 (398)
Q Consensus       378 ~~~~  381 (398)
                      ++.+
T Consensus       402 ~~~~  405 (406)
T TIGR01814       402 EEIL  405 (406)
T ss_pred             HHHh
Confidence            8764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.93  E-value=1.2e-23  Score=195.93  Aligned_cols=215  Identities=21%  Similarity=0.236  Sum_probs=161.4

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcCh----hhHHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~  141 (398)
                      ..+...++++.+++++    |.  +.+++++|+++++..++.+++++||+|+++.+.|.+.    ...++..|+++..+ 
T Consensus        52 ~~p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v-  124 (380)
T TIGR01325        52 ANPTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFV-  124 (380)
T ss_pred             CCchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEE-
Confidence            3445567777777765    44  4678899999999999999999999999999888653    23567789998888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| ......+   ...+
T Consensus       125 ~~~------d~~~l~~~i~~~t--klV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~p---l~~g  190 (380)
T TIGR01325       125 DPT------DLNAWEAAVKPNT--KLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQP---LKLG  190 (380)
T ss_pred             CCC------CHHHHHHhcCCCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhC
Confidence            542      6889999887754  99999999999999999   899999999999999999999 3222211   1223


Q ss_pred             cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|++|.++.+|.++ |+++++   +++++.+.........+.++...+.+...++    .+..+.++..+++..+
T Consensus       191 ~Divv~S~sK~l~g~g~~~gG~vv~~---~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~----tl~~r~~~~~~~a~~l  263 (380)
T TIGR01325       191 ADVVVYSATKHIDGQGRVMGGVIAGS---EELMAEVAVYLRHTGPAMSPFNAWVLLKGLE----TLSLRMQKQFDSALAI  263 (380)
T ss_pred             CCEEEeeccceecCCCCeEEEEEEeC---HHHHHHHHHHHHhhCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHH
Confidence            4588889999998777765 677777   6777777765544444445555444333333    3566777788888889


Q ss_pred             HHHhccCCC
Q 015890          300 REALSPLGE  308 (398)
Q Consensus       300 ~~~l~~~~~  308 (398)
                      .+.|+++|.
T Consensus       264 a~~L~~~p~  272 (380)
T TIGR01325       264 AEWLQAQPQ  272 (380)
T ss_pred             HHHHHcCCC
Confidence            999988775

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.93  E-value=8e-23  Score=192.40  Aligned_cols=360  Identities=16%  Similarity=0.103  Sum_probs=226.9

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHH
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKK   80 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~   80 (398)
                      +++-++..|.....-+.+.....++.+++....|..  +|.+++++...+.+....+++.      .+...++.+...+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~   82 (416)
T PRK13034          5 FSDSLEEYDDEVFAAINKELERQQDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER   82 (416)
T ss_pred             hhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence            466666666666666666665557888888877774  8999999988863211111211      12234444411114


Q ss_pred             HhhhcCCCCCcE-EEecChHHHHHHHHHHhccCCCEEEEeCCCCcCh-hhHHHh--cCc--EEEEeccCCCCCCCCChHH
Q 015890           81 LNQENKLYKSSV-MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-YMSFQM--TGV--THILVGPCSSKTLHPDADW  154 (398)
Q Consensus        81 l~~~~~~~~~~v-~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~--~g~--~~~~~~~~~~~~~~~d~e~  154 (398)
                      +++.+|.+  .. ++++||+.|+..++.+++++||+|+++..+|.+. ...++.  .+.  +...+ ..+..+..+|+++
T Consensus        83 la~l~g~~--~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~d~~~  159 (416)
T PRK13034         83 AKQLFGCD--YANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY-GVDRLTGLIDYDE  159 (416)
T ss_pred             HHHHhCCC--ceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEc-ccccccCCcCHHH
Confidence            55545643  44 4567889999999999999999999999999762 222221  122  11344 4444556689999


Q ss_pred             HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEcccccc
Q 015890          155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~  231 (398)
                      +++.++... +++|++..+.  +|...+   +.+|.++|+++|+++++|++| ++.-  |...... ...+++++|++|+
T Consensus       160 le~~l~~~~-~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~-~~~Di~~~s~~K~  232 (416)
T PRK13034        160 VEELAKEHK-PKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF-PHAHVVTTTTHKT  232 (416)
T ss_pred             HHHHHhhcC-CeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC-CCceEEEEeCccc
Confidence            999986433 5888876543  467777   889999999999999999999 4332  3222222 2356889999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      ++.+  ..|++++++  +.+...++...... ..+.+++..+++..++.. ......++++++.++.+++++.|++.|+ 
T Consensus       233 l~g~--~GG~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~-  307 (416)
T PRK13034        233 LRGP--RGGMILTND--EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY-  307 (416)
T ss_pred             CCCC--CCeEEEECc--HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC-
Confidence            9422  247777764  45555555432211 112333344444433332 1122345678889999999999988765 


Q ss_pred             ccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC------CCCCCCeEEEEecC-----CCHHHHHHHHHHH
Q 015890          310 AVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACGCRGHLRISFGG-----LVEDDCKAAADRL  377 (398)
Q Consensus       310 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~~~~iRi~~~~-----~~~~~~~~~~~~l  377 (398)
                      .+..+ ..+..+++.+.....+...+...| ++.||.+....      ....+..+|++++.     .+++|++++++.|
T Consensus       308 ~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l  386 (416)
T PRK13034        308 DLVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI  386 (416)
T ss_pred             EeccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence            44432 236777777764333444555555 68899997521      11235679999554     3579999999999


Q ss_pred             HHHHHHH
Q 015890          378 RRGLEEL  384 (398)
Q Consensus       378 ~~~~~~~  384 (398)
                      .+++.+.
T Consensus       387 ~~~~~~~  393 (416)
T PRK13034        387 LDVLDDL  393 (416)
T ss_pred             HHHHhcC
Confidence            9887743

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.93  E-value=1.4e-23  Score=195.81  Aligned_cols=283  Identities=20%  Similarity=0.195  Sum_probs=194.0

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |.  +..++++|+++++..++.+++++||+|+++.+.|.+..    ..+...|+++..+ 
T Consensus        57 ~~p~~~~le~~lA~l~----g~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v-  129 (391)
T TIGR01328        57 GNPTVSNLEGRIAFLE----GT--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI-  129 (391)
T ss_pred             CCchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE-
Confidence            3445566788887776    43  34677888889999999999999999999999886533    3456688888888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| .+..+.+.   ..+
T Consensus       130 d~~------d~e~l~~~i~~~t--klV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~~~---~~g  195 (391)
T TIGR01328       130 NMA------IPEEVKAHIKDNT--KIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTNPV---ALG  195 (391)
T ss_pred             CCC------CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCCch---hcC
Confidence            543      7889999998765  99999999999999999   889999999999999999999 44333221   123


Q ss_pred             cEEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      .++++.|++|.+|.+|.+ .|+++.+   +++++.++....  ......++...+.+...|+.    +..+.++..++..
T Consensus       196 ~Divv~S~sK~lgg~g~~~gG~v~~~---~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t----l~~r~~~~~~na~  268 (391)
T TIGR01328       196 VDVVVHSATKYIGGHGDVVAGLICGK---AELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT----LNIRMKRHSENAM  268 (391)
T ss_pred             CCEEEccccccccCCCCceEEEEEcC---HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc----HHHHHHHHHHHHH
Confidence            448889999999877766 4677766   788877764321  22334555555555544543    4556777788888


Q ss_pred             HHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890          298 IIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-----  352 (398)
Q Consensus       298 ~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-----  352 (398)
                      .+.+.|++++.+. +..|                ..+-.+.+++..    +.+...+++++-.+..   .-|...     
T Consensus       269 ~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~----~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~  344 (391)
T TIGR01328       269 KVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG----GFAGAKKLLNNLKLIRLAVSLGDAETLIQH  344 (391)
T ss_pred             HHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC----CHHHHHHHHHhCCcceEecCCCCCcccCcC
Confidence            8888888776532 2211                113345566642    1222333444434332   111110     


Q ss_pred             -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                       + .++.||+|++-   |+.+.+++.|.+++++
T Consensus       345 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~  390 (391)
T TIGR01328       345 PASMTHAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDA  390 (391)
T ss_pred             CCccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhh
Confidence                             0 13579999997   6788888888888865

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.93  E-value=8.7e-24  Score=199.87  Aligned_cols=339  Identities=16%  Similarity=0.112  Sum_probs=221.7

Q ss_pred             HcCCCeEEcCCccCC--C-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVY--W-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~--~-~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|...  + -.+|.+.+++.+++.+. ...|.+.....++.+.+.+.+    . ..+.+++++|+++|++
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~la~~L~~~~----~-~~~~v~~~~sGseA~e  120 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-LSFGAPTELEVELAELVIELV----P-SIEMVRMVNSGTEATM  120 (426)
T ss_pred             CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhC----C-CCCEEEEecCHHHHHH
Confidence            468899999987532  2 26899999999999774 233334444444444444432    2 2467999999999999


Q ss_pred             HHHHHhcc--CCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCCC-CCCChHHHHHhhcc-CCCCe
Q 015890          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSKT-LHPDADWLEKTLET-KPTPK  166 (398)
Q Consensus       104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~-~~~d~e~l~~~l~~-~~~~~  166 (398)
                      .+++....  .+++|+...++|+++...+... |.            ....+ +..... ...|++.+++.+.. ...++
T Consensus       121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~l~~~i~~~~~~~a  199 (426)
T PRK00062        121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDF-AKHTLTAPYNDLEAVEELFEEYGDEIA  199 (426)
T ss_pred             HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccc-ccceEEcCCCCHHHHHHHHHhCCCcEE
Confidence            99998643  3578999999999986433221 10            00000 000000 01378899988852 23367


Q ss_pred             EEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          167 LVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       167 ~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +|+++.....+|.+.+ ++++++|.++|++||+++|+||+|  +.. +........+....+.+++|.++ +|+++|+++
T Consensus       200 aiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~~~~~~~~~pDi~~~gK~l~-~G~p~ga~~  277 (426)
T PRK00062        200 AVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGGAQGYYGVTPDLTTLGKIIG-GGLPVGAFG  277 (426)
T ss_pred             EEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCccHHHHhCCCcchHhhhhHhh-CCCcceeee
Confidence            8888866666888765 888999999999999999999999  522 22111111111122468899998 889999998


Q ss_pred             ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890          244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  318 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  318 (398)
                      .+   +++++.+...   ....+++.+++.++++.++|+...  +..++..+.....++.+.+.+++.+.+....+. +.
T Consensus       278 ~~---~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~-G~  353 (426)
T PRK00062        278 GR---REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRV-GS  353 (426)
T ss_pred             EH---HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe-cc
Confidence            88   7888877522   223456788999999988887522  344555555555566666665566653333455 44


Q ss_pred             EEEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       319 ~~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++.+.+.....         +   ...+...++ ++||.+.+..    .+.+++++. .+++++++++++|.+++.++
T Consensus       354 ~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        354 MFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ----FEAGFVSAA-HTDEDIEKTLEAARKAFAAL  425 (426)
T ss_pred             eEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC----cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence            44444432100         1   245666665 8899998742    346777765 59999999999999998764

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.93  E-value=1.3e-23  Score=195.86  Aligned_cols=287  Identities=17%  Similarity=0.100  Sum_probs=196.7

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~  142 (398)
                      .+...++++.++++.    |  .+++++++|+++|+..++.+++++||+|+++.|+|.++..    .++..|+++..+ +
T Consensus        64 ~pt~~~Le~~lA~l~----g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d  136 (394)
T PRK07050         64 TPTSLALAQRLAEIE----G--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY-D  136 (394)
T ss_pred             CHHHHHHHHHHHHHh----C--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE-C
Confidence            344455666666554    5  4689999999999999999999999999999999988663    457789998888 4


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      ..      +.+.+++.+++++  ++|++++|+||+|...+   +++|+++|+++|+++|+|++| .+..-   .....+.
T Consensus       137 ~~------~~~~l~~~i~~~t--klV~le~p~Np~~~~~d---i~~I~~ia~~~gi~livD~a~a~~~~~---~~l~~Ga  202 (394)
T PRK07050        137 PL------IGAGIADLIQPNT--RLIWLEAPGSVTMEVPD---VPAITAAARARGVVTAIDNTYSAGLAF---KPFEHGV  202 (394)
T ss_pred             CC------CHHHHHHhcCCCC--eEEEEECCCCCCccHhh---HHHHHHHHHHcCCEEEEECCccccccc---CHHHcCC
Confidence            32      4567888888765  99999999999987666   999999999999999999999 43211   1122234


Q ss_pred             EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|++|.++. .+.+.|+++.++  ++++++++..+...+.+.++.....+...++.    +..+.++..++..++.
T Consensus       203 Di~v~S~tK~~~g~~~~~gG~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----l~~Rl~~~~~~a~~la  276 (394)
T PRK07050        203 DISVQALTKYQSGGSDVLMGATITAD--AELHAKLKLARMRLGIGVSADDCSLVLRGLPS----LQVRLAAHDRSALEVA  276 (394)
T ss_pred             eEEEEECCceecCCCCeeEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHH
Confidence            6889999999962 445689888765  77888887776655666666655444444433    4556677777777888


Q ss_pred             HHhccCCCCc-cccC----------------CccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC--------
Q 015890          301 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--------  353 (398)
Q Consensus       301 ~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~--------  353 (398)
                      +.|++.+.+. ++.|                ..+..+.+.+....  .+..++++.| +..++.+.-|....        
T Consensus       277 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~  355 (394)
T PRK07050        277 EWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL-ELFAIGWSWGGACSLAMPYDVA  355 (394)
T ss_pred             HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC-CCCeeccccCCccceEeeCccc
Confidence            8888766422 2211                11223444553211  2234455544 34454433332110        


Q ss_pred             ---------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 ---------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 ---------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                               .++.||+|++-   |+.+.+++.|.+++...
T Consensus       356 ~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~~  392 (394)
T PRK07050        356 SMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEAA  392 (394)
T ss_pred             ccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence                     12579999997   66777888888888764

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.93  E-value=1.3e-23  Score=197.52  Aligned_cols=346  Identities=12%  Similarity=0.097  Sum_probs=217.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc--CCC-CCcEEE-ecChH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLY-KSSVMV-TAGAN   99 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~--~~~-~~~v~~-~~g~t   99 (398)
                      .+|+.++||..|.  ..++ .+|.+.+++.+++.+... .+ ......+.+..+++.+.+..  +.. .+.+.+ +++++
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs  109 (412)
T TIGR02407        32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI-IH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGT  109 (412)
T ss_pred             CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc-ee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCch
Confidence            4789999998764  3333 689999999999875211 11 11112345556666665432  111 124555 48999


Q ss_pred             HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCCC-C-CCChHHHHHhhccC
Q 015890          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSKT-L-HPDADWLEKTLETK  162 (398)
Q Consensus       100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~-~-~~d~e~l~~~l~~~  162 (398)
                      +|++.+++...  ....+|+....+|++....+... |.            .++.+ |.+... . .-+++.+++.++..
T Consensus       110 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       110 NAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRM-PYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             HHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEEC-CCCCccccchhHHHHHHHHHHhc
Confidence            99999999865  22368999999999977544322 11            11222 221100 0 01366788888631


Q ss_pred             ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCC
Q 015890          163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       163 ----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  235 (398)
                          ..+++|++...+++.|. .+|++.+++|.++|++||+++|+||++  ++..|........+....+.+++|.++..
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~  268 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGY  268 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCC
Confidence                23688888877888998 578999999999999999999999999  65555332211111111234678999833


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C-ch-HHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G-PE-WVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+++|+++.+   +++ +.+.......+++.++.+.+++.+.++. . ++ ..++..+.-.+.++.+.+..+.++.....
T Consensus       269 G~pigav~~~---~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~  344 (412)
T TIGR02407       269 GLPLALTLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQ  344 (412)
T ss_pred             ccceeEEEEc---hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEe
Confidence            9999999998   554 4443333445667778877776666662 1 22 22333333333344444444445421122


Q ss_pred             cCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ....|+++|+.++... ....+...+. ++||.+.+...  ..+.||++++. .+++++++++++|.+++++
T Consensus       345 vrg~Gl~~~l~l~~~~-~~~~~~~~~~-~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~  412 (412)
T TIGR02407       345 VRGRGLMQGIECGDGD-LAGKIAKAAF-ENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE  412 (412)
T ss_pred             eecceeEEEEEecChH-HHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence            2223888999997531 2445666664 89999987432  24689999888 8999999999999998853

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.93  E-value=2.6e-23  Score=196.87  Aligned_cols=352  Identities=15%  Similarity=0.131  Sum_probs=226.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+...  +.......+....+++.+.+..+.. .+.|++++++++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~  116 (445)
T PRK08593         39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAN  116 (445)
T ss_pred             CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            4689999997763  2333 589999999999876321  1111122345556666666554422 25799999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cCc-------------EEEEeccCCCC-C--C-CCC-------hHHH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-T--L-HPD-------ADWL  155 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~--~-~~d-------~e~l  155 (398)
                      +.+++...  ....+|+....+|++....+-. .+.             .+..+ |.++. .  + ..+       ++.+
T Consensus       117 e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~  195 (445)
T PRK08593        117 DGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHI-PFPDKYRGMYEEPDANFVEEYLAPL  195 (445)
T ss_pred             HHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccccccCCcHHHHHHHHHHH
Confidence            99999753  2235799999999987643321 110             12223 22111 0  0 011       2344


Q ss_pred             HHhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890          156 EKTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS  229 (398)
Q Consensus       156 ~~~l~~---~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s  229 (398)
                      ++.++.   ...+++|+++..++..|.+ .|++.++++.++|++||+++|+||++  ++..|........+....+.+++
T Consensus       196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g  275 (445)
T PRK08593        196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG  275 (445)
T ss_pred             HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec
Confidence            444431   2337889999888888886 78889999999999999999999999  66655432211111112244889


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      |.++ .|+++|+++++   +++++.+.......+++.++...+++.+.|+..+  +.+++..+.....++.+.+..++++
T Consensus       276 K~l~-~G~p~gav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~  351 (445)
T PRK08593        276 KSLA-GGMPMSAIVGR---KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN  351 (445)
T ss_pred             cccc-CCcccEEEEEc---HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9998 78999999999   7888877543444567788888888888887522  2333333444444555555444555


Q ss_pred             CCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      .+.-+... |.++.+.+....       .....++..++ ++||++.+.    ..+.+|++++. .+++|++++++++.+
T Consensus       352 ~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~  425 (445)
T PRK08593        352 FVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV----AGNVLRFQPPLVITYEQLDTALNTIEQ  425 (445)
T ss_pred             cEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc----CCCEEEEECCCccCHHHHHHHHHHHHH
Confidence            54444455 455555553210       01235666664 799999663    24689999888 899999999999999


Q ss_pred             HHHHHhcccccc
Q 015890          380 GLEELVKDGMVQ  391 (398)
Q Consensus       380 ~~~~~~~~~~~~  391 (398)
                      +++++.+..-++
T Consensus       426 ~l~~~~~~~~~~  437 (445)
T PRK08593        426 AFTALEAGKLDQ  437 (445)
T ss_pred             HHHHHhccccCC
Confidence            999886644333

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.93  E-value=4.6e-23  Score=196.43  Aligned_cols=356  Identities=15%  Similarity=0.075  Sum_probs=232.2

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-----CC-CCcHHHHHHHHHHHhhh
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-----AD-EGLPELRDALVKKLNQE   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~-~~~~~~~~~l~~~l~~~   84 (398)
                      +...|.....-+.+.....++.++|....|.  .+|.+++++...+.+.-..+++     .. .....+.+...+.+.+.
T Consensus        15 ~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~--~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l   92 (452)
T PTZ00094         15 LKEADPELYELIEKEKERQIEGLELIASENF--TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEA   92 (452)
T ss_pred             HhhhCHHHHHHHHHHHHHHHcCeeEeccccc--CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHH
Confidence            4344555555554444445789999988776  4799999988877542111222     11 11233332334456666


Q ss_pred             cCCCCCcEEEe---cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----------cCcEEEEeccCCCCCCCCC
Q 015890           85 NKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----------TGVTHILVGPCSSKTLHPD  151 (398)
Q Consensus        85 ~~~~~~~v~~~---~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d  151 (398)
                      ++.+++++.++   +|+++++..++.++.++||+|++....|.++...+..          .++++..+ +.+.+ +.+|
T Consensus        93 f~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~-~~~~~-g~id  170 (452)
T PTZ00094         93 FGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY-QVNEK-GLID  170 (452)
T ss_pred             hCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeec-ccCCC-CCcC
Confidence            68877777677   7899999999999999999999988888665543311          11334444 45544 4789


Q ss_pred             hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccccCCcEEEEccc
Q 015890          152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCVEGDHVVNLFSF  228 (398)
Q Consensus       152 ~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~~~~~~i~~~s~  228 (398)
                      +++|++.++... ++++++.  ++.+|...|   +++|.++|+++|+++++|++| ++.-+...  ... .+.+++++|.
T Consensus       171 ~~~L~~~l~~~~-~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S~  243 (452)
T PTZ00094        171 YDKLEELAKAFR-PKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTTT  243 (452)
T ss_pred             HHHHHHHHHHhC-CCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcCC
Confidence            999999997533 4777664  345999999   889999999999999999999 55432211  111 1356889999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      +|+++  |.+.|+++.++   ++.+.+..     ....+..+.+....+++.++++.. ....+++.+++.++++++.+.
T Consensus       244 hK~l~--GP~Gg~l~~~~---~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~  318 (452)
T PTZ00094        244 HKSLR--GPRSGLIFYRK---KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA  318 (452)
T ss_pred             ccCCC--CCCceEEEEec---ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence            99883  33347777763   33322211     111222356667777777777753 234567788889999999999


Q ss_pred             hccCCCCccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-cCCCCC----CCCeEEEEecC-CC----HHHHH
Q 015890          303 LSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACG----CRGHLRISFGG-LV----EDDCK  371 (398)
Q Consensus       303 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~----~~~~iRi~~~~-~~----~~~~~  371 (398)
                      |.+.+. .+..+ ......++.+.....+..++...| +++||.+. ++..+.    .++.||+|++. ++    ++|++
T Consensus       319 L~~~g~-~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~  396 (452)
T PTZ00094        319 LEKRGY-DLVTGGTDNHLVLVDLRPFGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK  396 (452)
T ss_pred             HHhCCc-EEecCCCCCceEeecCCcCCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence            977654 44432 112335555544333555566654 68899994 443332    35789999866 33    89999


Q ss_pred             HHHHHHHHHHHHH
Q 015890          372 AAADRLRRGLEEL  384 (398)
Q Consensus       372 ~~~~~l~~~~~~~  384 (398)
                      ++++.|.+.++..
T Consensus       397 ~l~~~l~~~~~~~  409 (452)
T PTZ00094        397 FVADFLDRAVKLA  409 (452)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988753

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.93  E-value=3.8e-23  Score=194.25  Aligned_cols=343  Identities=12%  Similarity=0.113  Sum_probs=224.4

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|  ...++ .+|.+.+|+.+++.+....   ......+.+..+++.+....+...+.+++++++++|++
T Consensus        72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~---~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e  148 (442)
T TIGR03372        72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH---SQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVE  148 (442)
T ss_pred             CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc---ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence            357889999887  44454 5899999999998763211   11122445566666666554433467999999999999


Q ss_pred             HHHHHhcc----CC-CEEEEeCCCCcChhhHHHhcCcEEEE---eccCCCC-C--CCCChHHHHHhhc----cCCCCeEE
Q 015890          104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK-T--LHPDADWLEKTLE----TKPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~---~~~~~~~-~--~~~d~e~l~~~l~----~~~~~~~v  168 (398)
                      .+++....    .| .+|+....+|++....+-....+...   +.|.... .  -..|.+.+++.++    ....+++|
T Consensus       149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAav  228 (442)
T TIGR03372       149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI  228 (442)
T ss_pred             HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEE
Confidence            99997642    24 68999999999977544333211110   0011110 0  0126677777664    22336888


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEc
Q 015890          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAY  244 (398)
Q Consensus       169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~  244 (398)
                      +++..+...|.. .|++.++++.++|++||+++|+||++  |+..|........+....+.+++|.+| .| +++|.+++
T Consensus       229 IvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg-~G~~Pigavv~  307 (442)
T TIGR03372       229 ILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALG-GGVMPIGATIA  307 (442)
T ss_pred             EEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhc-CCcccceEEEe
Confidence            888777777875 46888999999999999999999999  655554322222221122336899998 78 68999998


Q ss_pred             cCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEE
Q 015890          245 PSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIY  319 (398)
Q Consensus       245 ~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~  319 (398)
                      +   +++.+.+..  .....+++.|+.+.+++.+.|+..+  +..++..+.-...++.|.+...+.+ .+.-+... |.+
T Consensus       308 ~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~-Gl~  383 (442)
T TIGR03372       308 T---EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK-GLL  383 (442)
T ss_pred             c---HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc-eEE
Confidence            8   677776632  2334567778999999999887522  2233333444444555555444455 22223344 777


Q ss_pred             EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.+.+.+. .....++..++ ++||++.+...  ..+.+|+.+.. .+++++++++++|.+++
T Consensus       384 ~giel~~~-~~~~~i~~~l~-~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       384 MAIEFRDN-EIGYAFAKELF-QQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             EEEEeCCh-HHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            77887542 12456677765 78999975321  24689999887 79999999999998763

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.93  E-value=8.6e-23  Score=189.44  Aligned_cols=308  Identities=18%  Similarity=0.273  Sum_probs=205.1

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      +++.++++.+.+..++..+  .    .++++++.+++.+.++  .+++++++|+|+|+..++.++ +++||+|+++.++|
T Consensus        10 ~~~e~~a~~~~~~~~~~~~--~----g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~   81 (376)
T TIGR02379        10 TGQELEYIAEAISEGKLSG--D----GPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTF   81 (376)
T ss_pred             CHHHHHHHHHHHHcCCccC--C----cHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence            4666888888876643221  1    2355666666655555  467999999999999999888 79999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      ......+...|++++.+ +.+++++.+|++.+++.+++++  ++|+   |+||+|...+   +++|.++|+++|+++|+|
T Consensus        82 ~~~~~~~~~~G~~~v~v-d~d~~~~~~d~~~le~~i~~~t--k~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIESAITHRT--KAIV---PVHYAGVACD---MDTIMALANKHQLFVIED  152 (376)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence            99988889999999999 8888888899999999998754  8886   5678999998   889999999999999999


Q ss_pred             ece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------
Q 015890          204 NTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-----------------  261 (398)
Q Consensus       204 e~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-----------------  261 (398)
                      ++| ++  +.+.+.... .+  +.++|+  +|.+. +|.+.|++++++  +++.++++.++..                 
T Consensus       153 aa~~~g~~~~~~~~g~~-~~--~~~fSf~~~K~l~-~g~~gG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  226 (376)
T TIGR02379       153 AAQGVMSTYKGRALGSI-GH--LGTFSFHETKNYT-SGGEGGALLIND--QAFIERAEIIREKGTNRSQFFRGEVDKYTW  226 (376)
T ss_pred             CccccCCccCCcccCCC-CC--EEEEeCCCCCcCc-ccCCceEEEECC--HHHHHHHHHHHHhCCCCccccccCCCccee
Confidence            999 43  455433221 12  334444  47775 677889988886  7888887765431                 


Q ss_pred             ----CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CCcccc-CCc---c-EEEEeeCCCCCC
Q 015890          262 ----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVKG-GEG---A-IYLWARLPEKHL  329 (398)
Q Consensus       262 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~-~~~---~-~~~~~~~~~~~~  329 (398)
                          ..+.++.+..+.+...|+.    +++..+.-++..++..+.|..+.   ...... +++   . .++++.++.. .
T Consensus       227 ~~~g~n~~~~~~~Aa~g~~qL~~----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~  301 (376)
T TIGR02379       227 RDIGSSYLPSELQAAYLWAQLEQ----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-D  301 (376)
T ss_pred             eeecccCCccHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-C
Confidence                1112233333333334443    34444444444444555554432   111110 111   1 2345666543 2


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCC----------C--C----------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGAC----------G--C----------RGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~----------~--~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +..++...| +++||.++.....          .  .          ...+.+-+.. .++++++..++.|++++
T Consensus       302 ~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       302 DRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL  375 (376)
T ss_pred             CHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            567777766 5899988743211          0  0          1246666555 78899999999888754

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.93  E-value=1.3e-22  Score=189.09  Aligned_cols=328  Identities=19%  Similarity=0.147  Sum_probs=203.8

Q ss_pred             CCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC-------CCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890           30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-------ISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        30 ~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~-------~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      .++++|+.++ -++..+|.+.+++.+++.+..       .+..+.  ..|..+..+.+.+.+.++++.+ +.+++++ ++
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~s-G~   81 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPS-GY   81 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECC-hH
Confidence            4678888776 455567777777666654421       111111  1223344444444444444653 3355555 44


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN  175 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~n  175 (398)
                      .++..++..+.++||.|++..-.|......++......+.+ +      ..|+++|++.++..    +...+|++++++|
T Consensus        82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s  154 (370)
T PRK05937         82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVYS  154 (370)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence            77777666666778888888888877776666554333334 2      34889999988731    1235777889999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc-cc-CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC-VE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~-~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      ++|.+.|   +++|.++|+++|+++++||+| ++.   ++..... .. .+.++++.|+||.+|+.|   +.++..   +
T Consensus       155 ~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~---~  225 (370)
T PRK05937        155 FKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSS---S  225 (370)
T ss_pred             CCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcC---H
Confidence            9999999   999999999999999999999 443   2211110 11 122366889999998666   334444   3


Q ss_pred             HHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      +....+...  ...+..+.+++...++.++++...+..+...++++++++++.+.|...+.        +....+.++. 
T Consensus       226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~--------~~~~~i~~~~-  296 (370)
T PRK05937        226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP--------GCVQPIFLPG-  296 (370)
T ss_pred             HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC--------CCEEEEEeCC-
Confidence            444444321  11233445666666666666542222234556777778888887754321        0111233332 


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                       .+..++...| .++||.+..... ...+.+|++++. .+++|++++++.|.+.++++.++
T Consensus       297 -~~~~~~~~~L-~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~  354 (370)
T PRK05937        297 -ISEQELYSKL-VETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN  354 (370)
T ss_pred             -hhHHHHHHHH-HHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence             1345566655 588998874332 235689999998 89999999999999999887654

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.93  E-value=1.1e-22  Score=189.76  Aligned_cols=310  Identities=14%  Similarity=0.104  Sum_probs=208.5

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      +++-.+++.+.+.....  + ..+...++++.+++++    |.  +++++++|+|+|+.+++.++ +++||+|+++.++|
T Consensus        13 ~~~e~~~~~~~l~~~~~--~-~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~   83 (379)
T PRK11658         13 GDEELAAVKEVLRSGWI--T-TGPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW   83 (379)
T ss_pred             CHHHHHHHHHHHHcCCc--c-CCHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence            45667788887765432  2 3455788999999988    43  46788999999999999999 79999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      .++...+...|++++.+ +.+.+++.+|++.+++.+++++  ++|+   |+|++|...+   +++|.++|+++|+++|+|
T Consensus        84 ~~~~~~~~~~G~~~v~v-d~~~~~~~~d~~~l~~~i~~~t--kav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         84 VSTLNMIVLLGATPVMV-DVDRDTLMVTPEAIEAAITPRT--KAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED  154 (379)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcccCC--eEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence            99988899999999999 8887777899999999998765  8887   5567999988   889999999999999999


Q ss_pred             ece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------------
Q 015890          204 NTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------------  262 (398)
Q Consensus       204 e~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~------------------  262 (398)
                      ++| ++  +.+.....  .+..++.++.+|.+  ++.+.|+++.++  +++.++++......                  
T Consensus       155 ~a~a~g~~~~~~~~g~--~g~~~~Sf~~~K~l--~~g~GG~v~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~  228 (379)
T PRK11658        155 AAHAVGTYYKGRHIGA--RGTAIFSFHAIKNI--TCAEGGLVVTDD--DELADRLRSLKFHGLGVDAFDRQTQGRAPQAE  228 (379)
T ss_pred             CCCccCCeECCeecCC--CCCEEEeCCCCCcC--cccCceEEEECC--HHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence            999 43  33322222  22244444445655  456778888775  67777776543110                  


Q ss_pred             ----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----cc-EEEEeeCCCC--CCCh
Q 015890          263 ----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARLPEK--HLDD  331 (398)
Q Consensus       263 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~--~~~~  331 (398)
                          .++.......++.....  ...+++..++.+++.+++.+.|++++...+..+.    .. ..+.+.++..  ..+.
T Consensus       229 ~~~~G~n~~~~~l~AAl~~~q--l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  306 (379)
T PRK11658        229 VLTPGYKYNLADINAAIALVQ--LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISR  306 (379)
T ss_pred             eeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCH
Confidence                00111111122222221  1345666777777788888888887653332221    12 1223344321  2356


Q ss_pred             HHHHHHHHHhcCeEEecCCC-------CC--------------CCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGA-------CG--------------CRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~-------~~--------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      .++.+.| +++||.+.....       |.              ....+-+-+.. .++++++..++.|++++
T Consensus       307 ~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  377 (379)
T PRK11658        307 DALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA  377 (379)
T ss_pred             HHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence            7788877 588987653220       00              01345555555 78899999999988865

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.93  E-value=3.3e-23  Score=195.68  Aligned_cols=346  Identities=13%  Similarity=0.130  Sum_probs=215.4

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCC-cEEE-ecChH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMV-TAGAN   99 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~-~v~~-~~g~t   99 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+... .+ ......+.+..+++.+.+....  ..+ .+++ ++||+
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs  113 (425)
T PRK09264         36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI-TH-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT  113 (425)
T ss_pred             CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc-cc-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence            4689999998774  3333 689999999998875211 11 1111234455566665543211  112 4655 47999


Q ss_pred             HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C---------c---EEEEeccCCCCC-C-CCChHHHHHhhccC
Q 015890          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G---------V---THILVGPCSSKT-L-HPDADWLEKTLETK  162 (398)
Q Consensus       100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g---------~---~~~~~~~~~~~~-~-~~d~e~l~~~l~~~  162 (398)
                      +|++.+++...  ....+|+....+|++....+-.. |         .   .+..+ |.+... . .-|++.+++.++..
T Consensus       114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~  192 (425)
T PRK09264        114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM-PYDGYFGGDVDTLAYLEKLLEDS  192 (425)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEe-CCCCccccchhHHHHHHHHHHhc
Confidence            99999999864  22368999999999976433222 1         0   12223 222100 0 02677888888531


Q ss_pred             ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCC
Q 015890          163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       163 ----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  235 (398)
                          ..+++|+++..++..|. +++++.+++|.++|++||+++|+||++  ++..|........+....+.+++|.++..
T Consensus       193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~  272 (425)
T PRK09264        193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGY  272 (425)
T ss_pred             cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCC
Confidence                23678888877777787 568889999999999999999999999  65555322111111111134778999855


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHh----ccCCCC-
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREAL----SPLGEG-  309 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~-  309 (398)
                      |+++|+++++   +++ ..+.......+++.++++.+++.++++. ..+  .+..++++++.+++.+.|    ++.+.+ 
T Consensus       273 G~pigav~~~---~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~  346 (425)
T PRK09264        273 GLPMALVLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLG  346 (425)
T ss_pred             ccceEEEEEc---hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence            9999999998   554 3333323344566777777777677732 111  123333444444444333    334432 


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .-.... +.++++.++.. .....++..+. ++||.+.+...+  ...||+++.. .+++++++++++|.++++++.+
T Consensus       347 ~~vrg~-Gl~~~i~l~~~-~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~  419 (425)
T PRK09264        347 AEVRGR-GMMQGIDFGDG-ELAGKIAAEAF-ENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA  419 (425)
T ss_pred             ecceec-ccEEEEEecCh-HHHHHHHHHHH-HCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            112223 77788888642 12445666664 889999875322  3689999775 7899999999999999988654

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.93  E-value=9.2e-23  Score=193.04  Aligned_cols=348  Identities=13%  Similarity=0.118  Sum_probs=226.3

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|  ...++ .+|++.+|+.+++.+...  + ......+.+..+++.+....+...+.+++++++++|++
T Consensus        79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~--~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve  155 (459)
T PRK11522         79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL--H-SQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE  155 (459)
T ss_pred             CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc--c-ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHH
Confidence            357889999887  44444 589999999999876322  1 11222445566666666554433467999999999999


Q ss_pred             HHHHHhcc----CC-CEEEEeCCCCcChhhHHHhcCcEE-EE--eccCCCCC---CCCChHHHHHhhcc----CCCCeEE
Q 015890          104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQMTGVTH-IL--VGPCSSKT---LHPDADWLEKTLET----KPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~g~~~-~~--~~~~~~~~---~~~d~e~l~~~l~~----~~~~~~v  168 (398)
                      .+++....    +| .+|+....+|++....+-...... ..  +.+..+.-   -..|.+.+++.++.    ...+++|
T Consensus       156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav  235 (459)
T PRK11522        156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV  235 (459)
T ss_pred             HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence            99997641    23 479999999999775443322111 00  00111100   01267888887752    2336788


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEc
Q 015890          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAY  244 (398)
Q Consensus       169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~  244 (398)
                      +++..+...|.+ .|++.++++.++|++||+++|+||++  ++..|........+....+.+++|.+| .| +++|.+++
T Consensus       236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg-gG~~Pigav~~  314 (459)
T PRK11522        236 ILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALG-GGVMPIGATIA  314 (459)
T ss_pred             EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhh-CCCccceeEEE
Confidence            888777778885 57778999999999999999999999  555554322221111122338899998 67 68999999


Q ss_pred             cCCcHHHHHHHH--HhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCC-CCccccCCccEE
Q 015890          245 PSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG-EGAVKGGEGAIY  319 (398)
Q Consensus       245 ~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~  319 (398)
                      +   +++.+.+.  ......+++.++.+.+++.+.|+..+  +..++..+.-...++.|.+..++++ .+.-+... +.+
T Consensus       315 ~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~-Gl~  390 (459)
T PRK11522        315 T---EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK-GML  390 (459)
T ss_pred             c---HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec-eeE
Confidence            8   77777653  22334566778999988888887522  2233333333333444443333344 22223344 677


Q ss_pred             EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.+.+... .....+...++ ++||.+.+..  ...+.+|+.++. .+++++++++++|.++++++.+
T Consensus       391 ~giel~~~-~~~~~i~~~l~-~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~  454 (459)
T PRK11522        391 MAIEFVDN-EIGYNFASEMF-RQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV  454 (459)
T ss_pred             EEEEecCc-hHHHHHHHHHH-HCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence            77777542 12445666665 7999997642  134789999887 8999999999999999988654

>PRK07482 hypothetical protein; Provisional

Probab=99.93  E-value=1.3e-22  Score=192.68  Aligned_cols=347  Identities=13%  Similarity=0.012  Sum_probs=229.8

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|..  .++ .+|++.+++.+++.+..  .+.. .....+.+..+++.+.+..+.+-+.+++++++++|+
T Consensus        47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~--~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAv  124 (461)
T PRK07482         47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA--YYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN  124 (461)
T ss_pred             CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC--ccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence            46899999998753  332 58999999999997632  1111 112245566677777665443346799999999999


Q ss_pred             HHHHHHhc------c-C-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-C-----C------C
Q 015890          103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-T-----L------H  149 (398)
Q Consensus       103 ~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~-----~------~  149 (398)
                      +.+++...      . + ..+|+....+|++....+-....             .+..+ +.+.. .     .      .
T Consensus       125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~  203 (461)
T PRK07482        125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHT-EAPHYYRRADAGMSEEQFSA  203 (461)
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEc-CCCccccccccCCCHHHHHH
Confidence            99999864      1 2 25799999999996543222110             11111 11110 0     0      0


Q ss_pred             CChHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890          150 PDADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       150 ~d~e~l~~~l~-~-~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~  224 (398)
                      -+++.+++.+. . ...+++|+++..+...|.+ .+++.+++|.++|++||+++|+||++  |+..|........+....
T Consensus       204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD  283 (461)
T PRK07482        204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD  283 (461)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC
Confidence            03567788774 2 2337889999777777876 57789999999999999999999999  666664433322222223


Q ss_pred             EcccccccCCCcc-eeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHH
Q 015890          225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVR  294 (398)
Q Consensus       225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~  294 (398)
                      +-+++|.++ .|+ ++|.++++   +++.+.+..       .....+++.|+.+.+++.+.|+..  ++.+++..+.-..
T Consensus       284 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~  359 (461)
T PRK07482        284 LITVAKGLT-SAYAPLSGSIVG---EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAY  359 (461)
T ss_pred             EEEEccccc-cCccccceeeec---HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            346789997 775 89999988   677776642       123457788999999999998752  2334444444555


Q ss_pred             HHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890          295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  364 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  364 (398)
                      ..+.+.+.+++++.+.-+... |.++.+.+.+...     +     ...++..++ ++||++.++.   ..+.+|+.++.
T Consensus       360 l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~---~~~~i~~~Ppl  434 (461)
T PRK07482        360 FRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP---HGDILGFAPPL  434 (461)
T ss_pred             HHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC---CCCEEEEeCCC
Confidence            566666666667654445555 6666677643110     0     234566665 8999986532   24679998666


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHh
Q 015890          365 -LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       .+++|+++++++|.++++++.
T Consensus       435 ~it~~ei~~~~~~l~~~l~~~~  456 (461)
T PRK07482        435 VLTRAEADEIVAIAKDAVDEVL  456 (461)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH
Confidence             799999999999999998864

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.93  E-value=1.3e-22  Score=189.60  Aligned_cols=336  Identities=14%  Similarity=0.079  Sum_probs=220.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ .+|++.+++.+++.+.. +.+  .....+....+++++.+..+  .+.+++++|+++|++
T Consensus        33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~--~~~~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e  107 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPS--PAFYNEPMAKLAGLLTQHSC--FDKVFFANSGAEANE  107 (395)
T ss_pred             CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-ccc--ccccCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHH
Confidence            4789999998753  3333 47999999999987532 112  12335677788888875433  467999999999999


Q ss_pred             HHHHHhcc------CC-CEEEEeCCCCcChhhHH-HhcCcEEEE--eccCCCCCC----CCChHHHHHhhccCCCCeEEE
Q 015890          104 NIVLTLCD------AG-DSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSKTL----HPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       104 ~~~~~l~~------~g-d~Vl~~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~~~----~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      .+++.+..      +| .+|+..+.+|++..... ...|.....  +.|.. .++    ..|++.+++.+.++  +++|+
T Consensus       108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~aavi  184 (395)
T PRK03715        108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV-PGFPKAELNDIASVEKLITDK--TVAVM  184 (395)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC-CCceeeCCchHHHHHHHcCCC--ceEEE
Confidence            99998751      23 57999999998865433 222321110  00111 111    24789999988754  58899


Q ss_pred             EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       170 i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      ++..++..|.+. +++.+++|.++|++||+++|+||++  ++..|........+....+.+++|.+| .|+++|.++++ 
T Consensus       185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg-~G~p~~av~~~-  262 (395)
T PRK03715        185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIG-GGVPLAALLAK-  262 (395)
T ss_pred             EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhh-CCcceEEEEEc-
Confidence            987788888864 6889999999999999999999999  655554322211111122457889998 67999999988 


Q ss_pred             CcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890          247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL  324 (398)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  324 (398)
                        +++.. +.......+++.++...+++.+.|+...  +..++..+.....++.+.+...+.+. ...... +.++.+.+
T Consensus       263 --~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~i-~~vrG~-Glm~~i~l  337 (395)
T PRK03715        263 --AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGL-EGERGE-GLLRALLL  337 (395)
T ss_pred             --ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCCc-CeEEcc-eeEEEEEe
Confidence              45532 2222223466778888888888887522  22333333333334444443334443 333445 67777777


Q ss_pred             CCCCCChHHHHHHHHHhc---CeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          325 PEKHLDDFEVVRWLAHRH---GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ...  ....+... +.+.   ||.+.+.    .++.+|+++.. .+++++++++++|.++++++
T Consensus       338 ~~~--~~~~~~~~-~~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        338 GKD--IGPQIVEK-ARDMQPDGLLLNAP----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             cCc--hHHHHHHH-HHhccCCCEEEeec----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            532  12334433 3355   9998653    24689999888 89999999999999998764

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.93  E-value=1e-22  Score=193.03  Aligned_cols=348  Identities=11%  Similarity=0.110  Sum_probs=217.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCc-EEEecChHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSS-VMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~-v~~~~g~t~  100 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+... .+ ......+.+..+++.+....+..  ... +++++++++
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE  113 (442)
T TIGR00709        36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP-LH-TLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD  113 (442)
T ss_pred             CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC-cc-ccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence            4789999998775  3333 589999999999876321 11 11122355666777776655321  124 455689999


Q ss_pred             HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCC-CC--C----CCh----HH
Q 015890          101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-TL--H----PDA----DW  154 (398)
Q Consensus       101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~~--~----~d~----e~  154 (398)
                      |++.+++...  ....+|+....+|++....+... |.            .+..+ +.+.. ..  .    .+.    +.
T Consensus       114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  192 (442)
T TIGR00709       114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFM-PYPHEYRCPFGIGGEAGSNASIEY  192 (442)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence            9999999764  22368999999999977544332 10            12222 21110 00  0    011    22


Q ss_pred             HHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcc
Q 015890          155 LEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       155 l~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s  227 (398)
                      +++.++    ....+++|+++..++..|. .+|+++++++.++|++||+++|.||++  |++.|........+....+-+
T Consensus       193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~  272 (442)
T TIGR00709       193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV  272 (442)
T ss_pred             HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE
Confidence            344442    1123688888876666666 479999999999999999999999999  766664332221111122234


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhcc
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      ++|.++ .|+++|+++.+   ++ ++.+.......+++.++.+++++.+.|+.. + +..++..+.-....+.+.+..++
T Consensus       273 ~gK~l~-~G~Pigav~~~---~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~  347 (442)
T TIGR00709       273 MSKAVG-GGLPLAVLLIA---PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKE  347 (442)
T ss_pred             Eccccc-CCcccEEEEEc---hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence            799998 58999999998   55 344333333467788999999999999752 2 22232222333334444444345


Q ss_pred             CCCCccccCCccEEEEeeCCCCCC-------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH
Q 015890          306 LGEGAVKGGEGAIYLWARLPEKHL-------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK  371 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~  371 (398)
                      ++.+.-+... |.++.+.+.+...             -...+...+ .++||++.+...  ..+.||+.++. .++++++
T Consensus       348 ~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~  423 (442)
T TIGR00709       348 HPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETGGR--EGEVFRLLCPITIDQEECE  423 (442)
T ss_pred             CCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeecCC--CCCEEEEECCCCCCHHHHH
Confidence            5554445555 6666666632210             023345545 489999976432  24789998887 8999999


Q ss_pred             HHHHHHHHHHHHHhc
Q 015890          372 AAADRLRRGLEELVK  386 (398)
Q Consensus       372 ~~~~~l~~~~~~~~~  386 (398)
                      ++++++.+++.++.+
T Consensus       424 ~~~~~l~~~l~~~~~  438 (442)
T TIGR00709       424 EGISRFKQAVEEALA  438 (442)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988754

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.93  E-value=1.5e-22  Score=188.19  Aligned_cols=301  Identities=17%  Similarity=0.127  Sum_probs=205.6

Q ss_pred             HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChhh
Q 015890           50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYM  128 (398)
Q Consensus        50 ~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~~  128 (398)
                      +++.+.+....   |...+...++++.+++++    +  .+++++++|+|+++..++.++ .++||+|+++.++|++...
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~----~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~   73 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYL----G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN   73 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence            44555554432   334556678888888887    4  256888899999999999998 5899999999999999999


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e
Q 015890          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F  207 (398)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~  207 (398)
                      .+...|++++.+ +.++.++.+|++.+++.+++++  ++|+++   |++|...+   +++|.++|+++|+++|+|++| +
T Consensus        74 ~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          74 AILLLGATPVFV-DIDPDTYNIDPELIEAAITPRT--KAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHcCCeEEEE-ecCCCcCCcCHHHHHHhcCcCC--eEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999999 8776567889999999997654  888876   46899888   888999999999999999999 4


Q ss_pred             ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC---------------CCCcchHH
Q 015890          208 MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------PICASIIS  270 (398)
Q Consensus       208 ~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~  270 (398)
                      +........... .++.+.|++  |.++  +...|+++.++  +++.+.+.......               ...++...
T Consensus       145 g~~~~~~~~~~~-~d~~~~S~~~~K~~~--~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (352)
T cd00616         145 GATYKGRKVGTF-GDAGAFSFHPTKNLT--TGEGGAVVTND--EELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQ  219 (352)
T ss_pred             CCeECCEEcccC-cceeEEcCCCCCCCc--ccCceEEEECC--HHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHH
Confidence            432111111111 135566665  9884  33468888775  56766665433211               11122222


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc-----cEEEEeeCCCC-CCChHHHHHHHHHhcCe
Q 015890          271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG-----AIYLWARLPEK-HLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~ll~~~gi  344 (398)
                      .+.+...+    ..+++..++.+++.+++.+.|+.++++++..+..     ...+.+.++.. ..+..++.+.| +++||
T Consensus       220 aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gI  294 (352)
T cd00616         220 AAIGLAQL----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEAL-KEAGI  294 (352)
T ss_pred             HHHHHHHH----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHH-HHCCC
Confidence            22222222    2356666777888999999999876656654321     23444555431 23577788877 58899


Q ss_pred             EEecCCCCC----------------C-------CCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          345 VVIPGGACG----------------C-------RGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       345 ~v~~g~~~~----------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      .+.......                .       .+.+|++++. .+++|++.++++|+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         295 ETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             CeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            775332210                0       1579999998 89999999988763

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.92  E-value=8.5e-23  Score=189.79  Aligned_cols=281  Identities=20%  Similarity=0.167  Sum_probs=195.6

Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCCCCC
Q 015890           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH  149 (398)
Q Consensus        74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~  149 (398)
                      ++.+.+.+.++++.  ++++++++++.++..++. ++++||+|+++.+.|.+...    .++..|++++.+ +..     
T Consensus        49 ~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d~~-----  119 (378)
T TIGR01329        49 RTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHV-DTT-----  119 (378)
T ss_pred             HHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEe-CCC-----
Confidence            45555555555565  566777777889988776 77999999999999987654    345689999888 542     


Q ss_pred             CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc
Q 015890          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF  228 (398)
Q Consensus       150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~  228 (398)
                       |++.+++++++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|+++ .+....+.   ..+.+++++|+
T Consensus       120 -d~~~le~~i~~~t--klv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~~~~l---~~g~Di~v~S~  190 (378)
T TIGR01329       120 -DLDKVKAALGPKT--KLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLLCNPL---ELGADIVYHSA  190 (378)
T ss_pred             -CHHHHHHhcCcCc--eEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCcEEEEec
Confidence             7899999998665  99999999999999999   999999999999999999998 33322222   12345889999


Q ss_pred             ccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          229 SKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       229 sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      +|.++. ++...|++++++  +.+.+++.........+.++...+.+...++    .+..+.++..++...+.+.|++++
T Consensus       191 tK~l~G~~~~~~G~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~----tl~~R~e~~~~na~~la~~L~~~~  264 (378)
T TIGR01329       191 TKFLAGHSDVMAGVLAVKG--EEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK----TLAIRIEKQQENARAIAMFLSTHP  264 (378)
T ss_pred             ceeccCCccceeEEEEeCc--HHHHHHHHHHHHhcCCcCCHHHHHHHHccCC----CHHHHHHHHHHHHHHHHHHHHhCC
Confidence            998863 346789998864  5666777666543344455554433333333    356667777777777777777665


Q ss_pred             CC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------------
Q 015890          308 EG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------------  353 (398)
Q Consensus       308 ~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------------  353 (398)
                      .+ ++..|                ..+..+.+.+ .......++++.| +..++.++-|....                 
T Consensus       265 ~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~  342 (378)
T TIGR01329       265 RVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEV  342 (378)
T ss_pred             CccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHH
Confidence            42 11111                1133455566 2222255777766 56787777775421                 


Q ss_pred             ------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 ------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 ------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                            .++.||+|++-   |+.+.+++.|.+++.+
T Consensus       343 ~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~  375 (378)
T TIGR01329       343 REERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT  375 (378)
T ss_pred             HHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence                  13589999997   6777888888888875

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK05968 hypothetical protein; Provisional

Probab=99.92  E-value=8.6e-23  Score=190.47  Aligned_cols=283  Identities=18%  Similarity=0.105  Sum_probs=195.7

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~  143 (398)
                      +...++++.++++.    |.+  ..+++++++.|+..++.+++++||+|+++.+.|.+..    ..++..|++++.+ +.
T Consensus        63 p~~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~  135 (389)
T PRK05968         63 PTVRAFEEMLAKLE----GAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYV-DG  135 (389)
T ss_pred             hhHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEe-CC
Confidence            33456777777765    543  3455567779999999999999999999999997643    4566789998887 43


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                      +      |++.+++.+ ++  +++|++++|+|+++..   .++++|+++|+++|+++|+|++| ......+.   ..+.+
T Consensus       136 ~------d~~~l~~~i-~~--tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~---~~g~D  200 (389)
T PRK05968        136 R------DEEAVAKAL-PG--AKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQRPI---TLGVD  200 (389)
T ss_pred             C------CHHHHHHhc-cc--CCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccCch---hcCCc
Confidence            2      788999888 33  4899999777766555   44999999999999999999999 33211111   12335


Q ss_pred             EEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       223 i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      +++.|++|.++.+| .+.|+++.+   +++++++..... .....+++...+.+...|+.    +..+.++..++..++.
T Consensus       201 ivv~S~tK~l~g~~~~~gG~i~~~---~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----l~~r~~~~~~~a~~la  273 (389)
T PRK05968        201 LVIHSASKYLGGHSDTVAGVVAGS---KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----LPLRMKAHEASALEIA  273 (389)
T ss_pred             EEEeeccccccCCCCeEEEEEEEC---HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----HHHHHHHHHHHHHHHH
Confidence            88889999997544 578988877   677777765432 23345666666666555554    5667777777888899


Q ss_pred             HHhccCCCCcccc-C-----------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---------------
Q 015890          301 EALSPLGEGAVKG-G-----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------------  353 (398)
Q Consensus       301 ~~l~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---------------  353 (398)
                      +.|+.++.++.+. |           ..+..+.+.+... .+..++++.| +..++.+.-|..+.               
T Consensus       274 ~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~  351 (389)
T PRK05968        274 RRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQP  351 (389)
T ss_pred             HHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCH
Confidence            9998887653332 2           1133555666532 2456677665 45566655554332               


Q ss_pred             --------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                              .++.||+|++.   |+.+.+++.|.+++.+.
T Consensus       352 ~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~  387 (389)
T PRK05968        352 NSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA  387 (389)
T ss_pred             HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence                    14689999997   56677778888888754

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.92  E-value=4.1e-23  Score=190.39  Aligned_cols=285  Identities=18%  Similarity=0.206  Sum_probs=194.7

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCC
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS  144 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~  144 (398)
                      +.+...+++++++++.    +  .+++++++|+++|+.+++. ++++||+|+++.+.|.+....+...-.+ .+.+    
T Consensus        52 ~~p~~~~le~~lA~le----g--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----  120 (364)
T PRK07269         52 KNPTRAKLEETLAAIE----S--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----  120 (364)
T ss_pred             CCccHHHHHHHHHHHh----C--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----
Confidence            4566778888888886    3  5689999999999999984 6689999999999997655433222110 0111    


Q ss_pred             CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i  223 (398)
                        .+..|++.+++.+++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .++...+   ...+.++
T Consensus       121 --~~~~d~~~l~~~i~~~T--klV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~~p---l~~gaDi  190 (364)
T PRK07269        121 --TYANTEEELIAAIEEDT--DIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQRP---IELGADI  190 (364)
T ss_pred             --EecCCHHHHHHhcCcCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhhCCcE
Confidence              12348899999998776  99999999999999998   999999999999999999998 3332222   2233458


Q ss_pred             EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      ++.|++|.++..| .-.|++++++  +++.+++...+.....+.++...+.+...|+.    +..+.++.++++..+.+.
T Consensus       191 vv~S~tK~l~g~~d~~gG~v~~~~--~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t----L~~r~~~~~~na~~~a~~  264 (364)
T PRK07269        191 VLHSATKYLSGHNDVLAGVVVTND--LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRMERSTANAQEVVAF  264 (364)
T ss_pred             EEecCceeccCCCcccceEEEeCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHH
Confidence            8999999996323 2358888765  67777776655444556677777776666664    677778888899999999


Q ss_pred             hccCCCC-ccc-cCCccEEEEeeCCCCCCChHHHHHHH---------HHhcCeEEecCCCCC-------------CCCeE
Q 015890          303 LSPLGEG-AVK-GGEGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------CRGHL  358 (398)
Q Consensus       303 l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~-------------~~~~i  358 (398)
                      |+.++.+ ++. ++.++. +.+.+.. ......+++.+         .....+.+.|.+.++             .++.|
T Consensus       265 L~~~p~v~~v~ypg~gg~-~sf~~~~-~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~li  342 (364)
T PRK07269        265 LKKSPAVKEVLYTGKGGM-ISFKVAD-ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLL  342 (364)
T ss_pred             HHhCCCccEEeCCCcCcE-EEEEECC-HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeE
Confidence            9988753 444 444444 4444431 11112222221         112233444433221             14689


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHHH
Q 015890          359 RISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       359 Ri~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      |+|++-   |+.+.+++.|.+++.
T Consensus       343 RlsvGl---E~~~dli~dl~~al~  363 (364)
T PRK07269        343 RLSIGI---EDARDLIADLKQALE  363 (364)
T ss_pred             EEEecc---CCHHHHHHHHHHHhc
Confidence            999997   667777788887763

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.92  E-value=5.6e-23  Score=183.99  Aligned_cols=343  Identities=16%  Similarity=0.148  Sum_probs=217.4

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----CCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      ..+.+++.|+.+... +.++.|++++..++...    +...|+.  ..+.++.|+.+++++    +.++.+|+||+|+|+
T Consensus        39 ~~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATE  113 (428)
T KOG1549|consen   39 HHGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATE  113 (428)
T ss_pred             cCCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchH
Confidence            345678888888644 34899999998887642    2111222  223566677777766    888888999999999


Q ss_pred             HHHHHHHHhcc-CCC----EEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890          101 AFVNIVLTLCD-AGD----SVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus       101 a~~~~~~~l~~-~gd----~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      +++++++.+.. .+|    .|++....|+....   .++..|++++++ |++.+ ...|++.+++.+++++  ++|.|.+
T Consensus       114 s~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l-pv~~~-~~~d~~~~~~~i~~~T--~lv~I~~  189 (428)
T KOG1549|consen  114 SNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL-PVEDS-GLVDISKLREAIRSKT--RLVSIMH  189 (428)
T ss_pred             HHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe-ccCcc-ccccHHHHHHhcCCCc--eEEEEEe
Confidence            99999999752 344    88888888877554   556778999999 88844 4689999999999976  9999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      .+|.+|+++|   +++|.++|+++|+.+++|.+| .+.......  .-+.+++..|.||++|++|  +|+++++.+.+.+
T Consensus       190 Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQavG~i~vDV~--eln~D~~s~s~HK~ygp~~--iGaLYvr~~~~~~  262 (428)
T KOG1549|consen  190 VNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAVGKIPVDVQ--ELNADFLSISAHKIYGPPG--IGALYVRRKRPRL  262 (428)
T ss_pred             cccCcccccc---HHHHHHHhCcCCcEEEeehhhhcCCccccHH--HcCchheeeecccccCCCc--ceEEEEccCCCcc
Confidence            9999999999   999999999999999999999 665333222  2344588889999999998  8999888411222


Q ss_pred             HH--HH---HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCc---cEEEEe
Q 015890          252 AT--QL---LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWA  322 (398)
Q Consensus       252 ~~--~l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~---~~~~~~  322 (398)
                      ..  .+   ...+.....+...+.+..+-.+.+.....+.-....+.+....+...+.. .+.....++.-   ...+-+
T Consensus       263 ~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~  342 (428)
T KOG1549|consen  263 RVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSL  342 (428)
T ss_pred             cccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceee
Confidence            10  01   11222334566666666666666541111111112222344444444332 22222222110   111222


Q ss_pred             eCC--CCCCChHHHHHHHHHhcCeEEecCC-------------CCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          323 RLP--EKHLDDFEVVRWLAHRHGVVVIPGG-------------ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       323 ~~~--~~~~~~~~~~~~ll~~~gi~v~~g~-------------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .++  .+..-..+... +...-|..+....             .+....+|||+++. ++++|++.+++.+.+.+..+..
T Consensus       343 ~~~~~~g~~~~~~~~~-~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~  421 (428)
T KOG1549|consen  343 SFPYVEGESLLMDLKD-VALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE  421 (428)
T ss_pred             ecccccCcchhhhhhh-hhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence            222  11100001111 1111222221111             00124689999999 8999999999999988877654

>PRK06541 hypothetical protein; Provisional

Probab=99.92  E-value=4.1e-22  Score=189.09  Aligned_cols=346  Identities=17%  Similarity=0.127  Sum_probs=220.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+..  .+.......+....+++.+.+..+.+.+.+++++++++|++
T Consensus        49 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve  126 (460)
T PRK06541         49 DRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA--FFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVE  126 (460)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCc--CccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHH
Confidence            4689999998764  3343 58999999999987632  11111122344555666665544333468999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CC---CCCC-------
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KT---LHPD-------  151 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~---~~~d-------  151 (398)
                      .+++....        ...+|+....+|++....+-.. |.            .+..+ |.+. ..   +.-+       
T Consensus       127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  205 (460)
T PRK06541        127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRV-PNTNFYRAPELGDDPEAFGRW  205 (460)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEe-CCCccccccccCCCHHHHHHH
Confidence            99987542        1368999999999876433222 11            11122 1111 00   1112       


Q ss_pred             -hHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          152 -ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       152 -~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                       ++.+++.++.  ...+++|+++..+++.|.+. |++.+++|.++|++||+++|+||++  |+..|........+....+
T Consensus       206 ~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDi  285 (460)
T PRK06541        206 AADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDI  285 (460)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCE
Confidence             3667777752  23356777776689999875 5889999999999999999999999  6554433222111111112


Q ss_pred             cccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       226 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      .+++|.++ +|+ ++|+++++   +++++.+...    ....+++.++.+.+++.+.|+...+  ++..++.+++.+++.
T Consensus       286 vt~gK~l~-~G~~pigav~~~---~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~--~~~~~~~~~~g~~l~  359 (460)
T PRK06541        286 ITCAKGIT-SGYSPLGAMIAS---DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER--EGLLDHVRDNEPAFR  359 (460)
T ss_pred             EEeccccc-CCccceeEEEEc---HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHH
Confidence            36899998 887 99999999   7887776532    1234667788888888888875211  123345555555555


Q ss_pred             HHhccC---CCCccccCCccEEEEeeCCCCC------CCh-------HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890          301 EALSPL---GEGAVKGGEGAIYLWARLPEKH------LDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  364 (398)
Q Consensus       301 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  364 (398)
                      +.|+++   +.+....+. |.++.+.+.+..      ...       ..+...++ ++||++.+..  ...+.+|+++..
T Consensus       360 ~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~--~g~~~lrl~Ppl  435 (460)
T PRK06541        360 ATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRADD--RGDPVVQLAPPL  435 (460)
T ss_pred             HHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEecC--CCCCEEEEECCC
Confidence            555443   332334455 666666663211      000       13445554 8999998731  124679999886


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHh
Q 015890          365 -LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       .+++++++++++|.++++++-
T Consensus       436 ~~t~~~id~~~~~l~~~l~~~~  457 (460)
T PRK06541        436 ISGQEEFDEIEQILRSVLTEAW  457 (460)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH
Confidence             799999999999999998753

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=4.1e-22  Score=183.96  Aligned_cols=294  Identities=16%  Similarity=0.128  Sum_probs=199.6

Q ss_pred             CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEE
Q 015890           64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHIL  139 (398)
Q Consensus        64 y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~  139 (398)
                      |..+....+.++.+.+.+....+. .. .++++++++|+..++.+++++||+|+++.|.|+++..    .++.+|+++..
T Consensus        56 y~YsR~gnPt~~~Le~~la~le~~-~~-~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~  133 (395)
T PRK05967         56 YTYGTRGTPTTDALCKAIDALEGS-AG-TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY  133 (395)
T ss_pred             CccCCCCChHHHHHHHHHHHHhCC-CC-EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence            333344566677777777665542 33 4556668899999999999999999999999988764    45788999888


Q ss_pred             eccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcccccc
Q 015890          140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVE  218 (398)
Q Consensus       140 ~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~  218 (398)
                      + +..      +.+.+++++++++  ++|++++|+||++.+.+   +++|+++|+++|+++|+|++| .+..   ..+..
T Consensus       134 v-d~~------~~e~l~~al~~~T--klV~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~---~~pl~  198 (395)
T PRK05967        134 Y-DPE------IGAGIAKLMRPNT--KVVHTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLY---FRPLD  198 (395)
T ss_pred             e-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCcee---cChhH
Confidence            7 432      3577999998776  99999999999887666   999999999999999999999 3211   11222


Q ss_pred             CCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          219 GDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       219 ~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      .+.++++.|++|.++- ++.-.|+++.+   ++..+++.........+.++...+.+...++.    +.-+.+++.+++.
T Consensus       199 ~GaDivv~S~tKy~~Gh~d~~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----l~lR~~~~~~na~  271 (395)
T PRK05967        199 FGVDISIHAATKYPSGHSDILLGTVSAN---EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLEHHRKSAL  271 (395)
T ss_pred             cCCCEEEEecccccCCCCCeeEEEEEcC---HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----HHHHHHHHHHHHH
Confidence            3456899999999852 34667877766   56666665555444556677766555555544    6777788888888


Q ss_pred             HHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----
Q 015890          298 IIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-----  352 (398)
Q Consensus       298 ~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-----  352 (398)
                      .+.+.|++++.+ +|+.|.                .+-.+.+.+.....+..+.+.+++++-.+..   .-|...     
T Consensus       272 ~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~  351 (395)
T PRK05967        272 EIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALH  351 (395)
T ss_pred             HHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeee
Confidence            899999887754 233221                1334566665321012344444554444431   111100     


Q ss_pred             -----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                 + .++.||||++-   |+.+.+++.|.++++..
T Consensus       352 ~~~~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~  392 (395)
T PRK05967        352 VKLGDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAA  392 (395)
T ss_pred             CCCChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                       0 12479999997   67778888888888754

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=5.9e-22  Score=184.96  Aligned_cols=281  Identities=20%  Similarity=0.189  Sum_probs=191.3

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~  144 (398)
                      ...++++.++++.    |.+ ..++ +++|+.++..++. ++++||+|+++.+.|++..    ..++..|++++.+ +.+
T Consensus        55 ~~~~le~~lA~l~----g~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~  126 (390)
T PRK08064         55 TREALEDIIAELE----GGT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV-DMT  126 (390)
T ss_pred             hHHHHHHHHHHHh----CCC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEE-CCC
Confidence            3455666666654    554 3455 4556688888886 7789999999999997543    4456689999888 542


Q ss_pred             CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i  223 (398)
                            |++.+++.+++++  ++|++++|+||||.+.+   +++|.++|+++|+++|+|++| ......+.   ..+.++
T Consensus       127 ------d~~~l~~~l~~~t--klV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~~~---~~g~Di  192 (390)
T PRK08064        127 ------NLEEVAQNIKPNT--KLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQKPL---DLGADV  192 (390)
T ss_pred             ------CHHHHHHhcCCCc--eEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccCch---hhCCcE
Confidence                  6889999998765  99999999999999998   899999999999999999999 33221111   224568


Q ss_pred             EEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       224 ~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      ++.|++|.++ .+|...|++++++  +++++.+......+....++...+.+...    ...+..+.++..+++..+.+.
T Consensus       193 vv~S~tK~~~G~~~~laG~~v~~~--~~~~~~l~~~~~~~g~~~~~~~a~l~~~g----l~tl~~R~~~~~~~a~~la~~  266 (390)
T PRK08064        193 VLHSATKFLAGHSDVLAGLAVVKD--EELAQKLYFLQNSFGAVLGVQDCWLVLRG----LKTLHVRLEHSSETANKIALY  266 (390)
T ss_pred             EEeecceeccCCccceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcc----cCcHHHHHHHHHHHHHHHHHH
Confidence            8999999985 3445678877764  67888888777644444444444432222    233667777788888888888


Q ss_pred             hccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCe---EEecCC------------
Q 015890          303 LSPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGG------------  350 (398)
Q Consensus       303 l~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~~g~------------  350 (398)
                      |++++.+ +++.|                ..+..+.+.+.    + .+-...++++.++   .++-|.            
T Consensus       267 L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~----~-~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~  341 (390)
T PRK08064        267 LQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ----S-EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMS  341 (390)
T ss_pred             HhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC----C-HHHHHHHHHhCCcceEcccCCCCcceeECCcccc
Confidence            8876642 22211                11334555553    1 2334456667777   444441            


Q ss_pred             CCC-----------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          351 ACG-----------CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       351 ~~~-----------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .+.           .++.||+|++-   |+.+.+++.|.++++++.
T Consensus       342 h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~~  384 (390)
T PRK08064        342 HAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYVE  384 (390)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhcc
Confidence            111           14689999997   566777788888887754

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.92  E-value=1.6e-22  Score=187.24  Aligned_cols=282  Identities=16%  Similarity=0.100  Sum_probs=193.8

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS  145 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~  145 (398)
                      ...+++.++++.    +  .+++++++|+++|+..++.+++++||+|+++++.|++....    ++..|+++..+ +.. 
T Consensus        52 ~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~-d~~-  123 (377)
T TIGR01324        52 HFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY-DPL-  123 (377)
T ss_pred             HHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE-CCC-
Confidence            357777777765    4  35789999999999999999999999999999999876543    45678887766 321 


Q ss_pred             CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                           +.+.+++.+++++  ++|++++|+||+|...+   +++|+++|+++|+++|+|++| .+....   ....+.+++
T Consensus       124 -----~~e~l~~~i~~~t--klV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~~---pl~~gaDiv  190 (377)
T TIGR01324       124 -----IGEDIATLIQPNT--KVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLFK---PLEHGVDIS  190 (377)
T ss_pred             -----CHHHHHHhcCCCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccC---ccccCceEE
Confidence                 2378999988765  99999999999998877   999999999999999999999 544322   223456689


Q ss_pred             EcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          225 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       225 ~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +.|++|.++. ++...|+++.+   ++.++.+.........+.++...+.+...++.    +.-+.++..+++..+.+.|
T Consensus       191 v~S~tK~l~G~~d~~gG~v~~~---~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t----l~~R~~~~~~~a~~la~~L  263 (377)
T TIGR01324       191 IQAGTKYLVGHSDIMIGTVVAN---ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT----LGVRLKQHQESSLAIAKWL  263 (377)
T ss_pred             EecCceeccCCCCceEEEEEeC---HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHHH
Confidence            9999999963 34678888887   66666666444434455566555555544443    5566777788888888888


Q ss_pred             ccCCCC-ccccC----------------CccEEEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCC-------------
Q 015890          304 SPLGEG-AVKGG----------------EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGAC-------------  352 (398)
Q Consensus       304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~-------------  352 (398)
                      ++.+.+ +++.|                ..+..+.+++.. .......+++.| +-.++.+.-|...             
T Consensus       264 ~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~~~~~~~~~  342 (377)
T TIGR01324       264 SEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHL-QLFGLGYSWGGYESLALCNQPELGHR  342 (377)
T ss_pred             HhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEeccCCCccceeecCCCCCCHH
Confidence            877653 23322                113345556642 111233444433 2333333222210             


Q ss_pred             ------CCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 ------GCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 ------~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                            -.++.||+|++-   |+.+.+++.|.++++.
T Consensus       343 ~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~  376 (377)
T TIGR01324       343 PNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA  376 (377)
T ss_pred             HHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence                  012579999997   6677788888888764

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.92  E-value=4e-22  Score=187.39  Aligned_cols=286  Identities=19%  Similarity=0.236  Sum_probs=193.4

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  142 (398)
                      .+....+++.++++.    |  .+..++++|+++|+..++.+++++||+|+++.+.|++..    ..++..|++++.+ +
T Consensus        63 ~p~~~~Le~~lA~le----g--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v-d  135 (431)
T PRK08248         63 NPTTDVFEKRIAALE----G--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV-D  135 (431)
T ss_pred             CchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE-C
Confidence            334455666666654    5  356788999999999999999999999999999997633    4456789999988 5


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .      .|++.+++.+++++  ++|++++|+||||.+++   +++|+++|+++|+++|+|+++ .+....+   ...+.
T Consensus       136 ~------~d~e~l~~ai~~~t--klV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~~~~p---l~~ga  201 (431)
T PRK08248        136 P------SDPENFEAAITDKT--KALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPYLLRP---IEHGA  201 (431)
T ss_pred             C------CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccccCCh---hHcCC
Confidence            4      27899999998765  99999999999999999   889999999999999999998 3332221   23456


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHHH-------------------------------HHHHHHhhccCCCCcchHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-------------------------------ATQLLKVQDNIPICASIIS  270 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~~~~  270 (398)
                      ++++.|++|.+|.+|.++|.+++.+....+                               .+.............++..
T Consensus       202 Divv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~  281 (431)
T PRK08248        202 DIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFN  281 (431)
T ss_pred             CEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence            688999999999899888886664210000                               0111112222334555555


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChH
Q 015890          271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF  332 (398)
Q Consensus       271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~  332 (398)
                      .+.+...|+.    +..+.++..+++..+.+.|++++.++ +..|                . .|-.+.+.+...    .
T Consensus       282 a~l~~rgl~t----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~----~  353 (431)
T PRK08248        282 SFLLLQGLET----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGG----V  353 (431)
T ss_pred             HHHHhcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----H
Confidence            5554444443    66777888889999999999887633 2221                1 133455566421    2


Q ss_pred             HHHHHHHHhcCeEEec---CCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIP---GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~---g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +...++.++-.+....   |...                      + .++.||+|++-   |+.+.+++.|.+++.+.
T Consensus       354 ~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~Dl~~Al~~~  428 (431)
T PRK08248        354 EAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT---EAIDDILDDLRQAIRQS  428 (431)
T ss_pred             HHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence            3333344443433311   1110                      0 13579999997   67778888888888754

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=1.6e-21  Score=171.24  Aligned_cols=358  Identities=19%  Similarity=0.177  Sum_probs=258.8

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      +...+...+..+.+.....++.|+|--..|.  .++.|++++-..+.+.      .---|+-....+++++...+..+++
T Consensus         7 l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L   84 (413)
T COG0112           7 LADYDPEIFEAIQQELERQREHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL   84 (413)
T ss_pred             HHhcCHHHHHHHHHHHHHHhhceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence            3345666777777777777889999877766  4799999988777542      1223444566678888888889999


Q ss_pred             cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---HhcC--cEEEEeccCCCCCCCCChHHHHHhh
Q 015890           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTG--VTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      ++.+--||-..+|+ .|+.+++.++++|||+|+-.+-.+.++...-   ...|  .+.+.+ +++.++..+|.|++++..
T Consensus        85 Fga~~anVQPhSGs-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y-~vd~et~~IDyD~~~k~a  162 (413)
T COG0112          85 FGAEYANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY-GVDPETGLIDYDEVEKLA  162 (413)
T ss_pred             hCCCccccCCCCch-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEec-ccccccCccCHHHHHHHH
Confidence            99988888877776 9999999999999999998777776554322   2223  477788 888887889999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      .+.+ ||+|+......  -..+|   ++++.++|++.|.+|++|.+|   +...|.-+.+..+ ..++++|.||+|  +|
T Consensus       163 ~e~k-PK~ii~G~SaY--~r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTl--rG  233 (413)
T COG0112         163 KEVK-PKLIIAGGSAY--SRPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTL--RG  233 (413)
T ss_pred             HHhC-CCEEEECcccc--ccccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCC--CC
Confidence            8665 79998763333  34566   899999999999999999999   4445554455444 558899999998  68


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      .|.|.|.+++  +++.+++++.. .....++....+++.+-++.+ .+..++++.+++-++++.|.+.|.+.|...+.+.
T Consensus       234 PrGG~Il~~~--eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGg  311 (413)
T COG0112         234 PRGGIILTND--EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGG  311 (413)
T ss_pred             CCceEEEecc--HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCC
Confidence            8999999996  68889887743 333333333333333334433 3455789999999999999999999887444455


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-CC-----CCCeEEEEecC-----CCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-CG-----CRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~-----~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~  383 (398)
                      .....+.+++.....+.. .++.+|.+.||.+.--.. +.     .+..|||+...     ..++|+++..+.|.+++..
T Consensus       312 TdnHl~lVDl~~~~~~Gk-~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         312 TDNHLVLVDLRSKGLTGK-KAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             ccceEEEEEcccCCCCHH-HHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence            556677788874333444 445566799999854432 22     25689998433     4678899988888888876


Q ss_pred             H
Q 015890          384 L  384 (398)
Q Consensus       384 ~  384 (398)
                      .
T Consensus       391 ~  391 (413)
T COG0112         391 L  391 (413)
T ss_pred             c
Confidence            3

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.92  E-value=4.6e-22  Score=179.12  Aligned_cols=339  Identities=17%  Similarity=0.142  Sum_probs=230.6

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.||||..+..+..   .+|.|.+|+.+++.++.  .|+.+   .++.-.+++.+.++.+. .+.|-+++++|+|..
T Consensus        50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtm  123 (432)
T COG0001          50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVPS-IEKVRFVNSGTEATM  123 (432)
T ss_pred             CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcCc-ccEEEEecchhHHHH
Confidence            46899999998875553   68899999999999864  45432   34555666766665442 378999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHh-cC--cEEEE------eccCC--CC----CCCCChHHHHHhhccC-CCC
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG--VTHIL------VGPCS--SK----TLHPDADWLEKTLETK-PTP  165 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g--~~~~~------~~~~~--~~----~~~~d~e~l~~~l~~~-~~~  165 (398)
                      .+++...  ...|+|+..+.||+++.+.+.. .|  .....      + |.+  .+    .+ -|++.+++++++. .++
T Consensus       124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv-p~~~a~~ti~~~y-ND~~al~~~~~~~g~~I  201 (432)
T COG0001         124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV-PADVAKHTLVLPY-NDLEALEEAFEEYGDDI  201 (432)
T ss_pred             HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCC-ChhhhccEEEecC-CCHHHHHHHHHHcCCcE
Confidence            9998864  3448999999999997764432 22  11000      1 000  00    01 1899999999854 458


Q ss_pred             eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--ecc--CCCccccccCCcEEEEcccccccCCCcceeE
Q 015890          166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       166 ~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                      ++|+++......|.+ ..++.++.|.++|+++|++||.||+.  |..  .|...   .++....+.+++|.+| +|+++|
T Consensus       202 AaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~---~~gi~PDlttlGKiIG-GGlP~g  277 (432)
T COG0001         202 AAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG---YYGVEPDLTTLGKIIG-GGLPIG  277 (432)
T ss_pred             EEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc---ccCcCcchhhhhhhhc-CCccee
Confidence            889998655556775 55667999999999999999999999  332  23211   1223344779999998 999999


Q ss_pred             EEEccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          241 YIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      .+.++   +++++.+...   .+..+++.|+.+++|..+.|+...   ..+++..+.-.++++-+.+.+.+.+.......
T Consensus       278 a~gGr---~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~  354 (432)
T COG0001         278 AFGGR---AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNR  354 (432)
T ss_pred             eeccH---HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Confidence            99999   7888876543   345667889999999999988622   23555555666666667777777665333333


Q ss_pred             CccEEEEeeCCCCCC--------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHL--------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~--------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .++++.+.-.+....        +   -..+...++ ++||++.|+.    -...-+|..+ +++++++.++++.+++++
T Consensus       355 ~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~----~ea~flS~ah-te~di~~~~~a~~~~~~~  428 (432)
T COG0001         355 VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQ----FEAGFLSTAH-TEEDIDRTLEAADEAFKE  428 (432)
T ss_pred             ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCcc----ccceeeeccc-CHHHHHHHHHHHHHHHHH
Confidence            334433222221110        1   123455565 8999999863    1334466664 899999999999999988


Q ss_pred             Hhc
Q 015890          384 LVK  386 (398)
Q Consensus       384 ~~~  386 (398)
                      +..
T Consensus       429 ~~~  431 (432)
T COG0001         429 LAG  431 (432)
T ss_pred             hhc
Confidence            754

>PRK07678 aminotransferase; Validated

Probab=99.92  E-value=8.9e-22  Score=186.72  Aligned_cols=347  Identities=14%  Similarity=0.097  Sum_probs=224.7

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +... ...+....+++.+.+..+. .+.+++++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e  119 (451)
T PRK07678         44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY--FPLT-QSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANE  119 (451)
T ss_pred             CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc--cccc-cCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHH
Confidence            4689999998764  3333 589999999999876321  1111 1233445566666555443 347999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcC-c------------EEEEeccCCC-CCCC-------CC---
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG-V------------THILVGPCSS-KTLH-------PD---  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g-~------------~~~~~~~~~~-~~~~-------~d---  151 (398)
                      .+++....       +| .+|+....+|+++...+-... .            .+..+ +.+. ....       .+   
T Consensus       120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  198 (451)
T PRK07678        120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHV-PPPDCYRMPGIESEDIYDLEC  198 (451)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEe-CCCccccccccCChHHHHHHH
Confidence            99997642       23 579999999999765443221 1            11112 1110 0000       01   


Q ss_pred             hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.++  ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|........+....+-
T Consensus       199 ~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv  278 (451)
T PRK07678        199 VKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII  278 (451)
T ss_pred             HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE
Confidence            233566664  22347899999777667775 67789999999999999999999999  66666432222222222244


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE  297 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~  297 (398)
                      +++|.+| .| +++|.++++   +++.+.+..      .....+++.|+.+.+++.+.|+..  ++.+++..+.-...++
T Consensus       279 t~gK~lg-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~  354 (451)
T PRK07678        279 TMAKGIT-SAYLPLSATAVK---KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLE  354 (451)
T ss_pred             Eeecccc-cCCcceeEEEEc---HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            7799998 66 699999999   788877753      124567888999999999998752  2334444444455566


Q ss_pred             HHHHHhccCCCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCC--CCCCeEEEEecC-CC
Q 015890          298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--GCRGHLRISFGG-LV  366 (398)
Q Consensus       298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~--~~~~~iRi~~~~-~~  366 (398)
                      .|.+.+++++.+.-+... |.++.+.+.+..        .....++..++ ++||++.+....  ...+.+|+++.. .+
T Consensus       355 ~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it  432 (451)
T PRK07678        355 QLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKNGDTVAGYNNVLTLSPPLVIS  432 (451)
T ss_pred             HHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeecCccccCCCCEEEEECCCcCC
Confidence            666666666654434455 555555553211        01234556554 899999764221  224679999887 79


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 015890          367 EDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       367 ~~~~~~~~~~l~~~~~~~  384 (398)
                      ++|++++++++.++++++
T Consensus       433 ~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        433 SEEIAFIVGTLKTALERI  450 (451)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999998764

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.92  E-value=8.5e-22  Score=184.37  Aligned_cols=330  Identities=14%  Similarity=0.064  Sum_probs=228.2

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-C-CcEEE--ecChHHHHHHHHHHhcc-------
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSVMV--TAGANQAFVNIVLTLCD-------  111 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~-~~v~~--~~g~t~a~~~~~~~l~~-------  111 (398)
                      ++.|++.+.+...+.... ..+...+...++.+.+.+++.+.+|.+ + +++.+  |+|+|+|++.++.+...       
T Consensus        52 ~~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            457888888888876432 223234445688999999999988987 3 45554  79999999998876531       


Q ss_pred             -CC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890          112 -AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       112 -~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                       .|     ..|+++.-.|.++...++..|+++..+ +++++++.+|++.|++++++++  .+|+++.++|.||.+.|   
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i-~~d~~~~~vd~~~L~~~i~~~t--~lV~~t~g~t~tG~idp---  204 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREV-PMDPGRYVIDPEQVVEAVDENT--IGVVCILGTTYTGEYED---  204 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEE-ecCCCceeeCHHHHHHHHhhCC--eEEEEEeCCCCCcccCC---
Confidence             11     368999999999999999999999999 8877656899999999998775  89999999999999999   


Q ss_pred             HHHHHHHHHHc------CCEEEEeece----ecc--CCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHH-H
Q 015890          186 LKRISDLCKAA------GSWLVVDNTY----FMY--DGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEG-F  251 (398)
Q Consensus       186 l~~i~~l~~~~------~~~livDe~~----~~~--~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~-~  251 (398)
                      +++|+++|+++      |+++++|.+|    .++  ...+........+-+..|.||++ ++.  .+|+++.++  ++ +
T Consensus       205 i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~--g~G~l~~r~--~~~l  280 (431)
T TIGR01788       205 VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYP--GVGWVIWRD--EEAL  280 (431)
T ss_pred             HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCC--CcEEEEEeC--hHHc
Confidence            99999999999      9999999999    112  11111111223345778999987 544  478888775  32 2


Q ss_pred             HHHHHH---hhc------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEE
Q 015890          252 ATQLLK---VQD------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYL  320 (398)
Q Consensus       252 ~~~l~~---~~~------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~  320 (398)
                      ...+..   +..      ...++.+..........|.. +...+++..++..++.+++.+.|++.+.++++.+ +....+
T Consensus       281 ~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV  360 (431)
T TIGR01788       281 PEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLV  360 (431)
T ss_pred             chhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEE
Confidence            222211   000      00111111121222222222 4466788889999999999999999887677764 335666


Q ss_pred             EeeCCCC---CCChHHHHHHHHHhcCeEEecCCC---CCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          321 WARLPEK---HLDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       321 ~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+++...   ..+..++.+.| .++|+.+.....   ....-.+|+++.. .+.+.++++++.|.+++..+
T Consensus       361 ~Fr~~~~~~~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       361 AFKLKDDADPGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             EEEeCCCCCCCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            6676531   13456777766 578987633322   1123468999875 67889999999999888654

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK06062 hypothetical protein; Provisional

Probab=99.92  E-value=6.8e-22  Score=187.32  Aligned_cols=344  Identities=14%  Similarity=0.107  Sum_probs=223.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +.. ....+.+..+++.+.+..+...+.+.+++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve  126 (451)
T PRK06062         50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAPGDLSKVFFTNGGADANE  126 (451)
T ss_pred             CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHH
Confidence            4689999998764  3333 589999999999876321  111 222445566666666554433468999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-----------EEEEeccCCC-CC--CC--CC-------hHHHHH
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-----------THILVGPCSS-KT--LH--PD-------ADWLEK  157 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-----------~~~~~~~~~~-~~--~~--~d-------~e~l~~  157 (398)
                      .+++...  ....+|+....+|+++...+-.. +.           .+..+ +.+. ..  +.  -|       ++.+++
T Consensus       127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~le~  205 (451)
T PRK06062        127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF-FGPFLYRSEFHATTEEEECERALAHLER  205 (451)
T ss_pred             HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe-CCCCccccccCCCChHHHHHHHHHHHHH
Confidence            9999764  22368999999999976544322 11           01111 1110 00  10  12       567788


Q ss_pred             hhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890          158 TLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       158 ~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~  232 (398)
                      .++.  ...+++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|........+....+.+++|.+
T Consensus       206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~l  285 (451)
T PRK06062        206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGV  285 (451)
T ss_pred             HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhh
Confidence            7752  2347888888777777876 57889999999999999999999999  65555432222122222244789999


Q ss_pred             CCCcc-eeEEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHH-HHHHHHHHHHhccC
Q 015890          233 GMMGW-RVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGP--EWVTERVKDL-VRNREIIREALSPL  306 (398)
Q Consensus       233 ~~~G~-r~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~-~~~~~~l~~~l~~~  306 (398)
                      | .|+ ++|.++++   +++.+.+...  ....+++.++.+.+++.+.|+...  +..++..+.- ...++.|.+..++.
T Consensus       286 g-gG~~Pigav~~~---~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~  361 (451)
T PRK06062        286 N-SGYVPLGGVAIS---EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERH  361 (451)
T ss_pred             h-cCCcCcEEEEEc---HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            7 674 89999999   7787776532  234577888999999999887521  2222222222 23445555554555


Q ss_pred             CCCccccCCccEEEEeeCCCCCC-------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKHL-------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA  372 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~  372 (398)
                      +.+..+... |.++.+.+.+...             ....++..++ ++||++.+.     .+.+|+++.. .+++++++
T Consensus       362 ~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~  434 (451)
T PRK06062        362 PSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN-----GNRIHVVPPCTVTEDEVRE  434 (451)
T ss_pred             CcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec-----CCEEEEECCccCCHHHHHH
Confidence            543344455 5555666532110             1235566554 899998652     3579998866 79999999


Q ss_pred             HHHHHHHHHHHHh
Q 015890          373 AADRLRRGLEELV  385 (398)
Q Consensus       373 ~~~~l~~~~~~~~  385 (398)
                      +++++.++++++.
T Consensus       435 ~~~~l~~~l~~~~  447 (451)
T PRK06062        435 GLAILDAALAVAD  447 (451)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998754

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.91  E-value=3.2e-21  Score=179.91  Aligned_cols=307  Identities=18%  Similarity=0.224  Sum_probs=202.3

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      .++-.+++.+.+....  .|+    ..++++.+.+++++.++.  +++++++|+++|+..++.++ +++||+|+++.++|
T Consensus        10 ~~~~~~~~~~~l~~~~--~~g----~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~   81 (375)
T PRK11706         10 VGTELDYIQQAMSSGK--LCG----DGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF   81 (375)
T ss_pred             CHHHHHHHHHHHHcCC--ccC----CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence            3455777777765532  232    234566666666665564  68999999999999887766 68999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      ..+...+...|++++.+ +.+++++.+|++++++.+++++  ++|+++   |++|...+   +++|.++|+++|+++|+|
T Consensus        82 ~~~~~~~~~~G~~~v~~-d~d~~~~~~d~~~le~~i~~~t--k~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD  152 (375)
T PRK11706         82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIEAAITPKT--RAIVPV---HYAGVACE---MDTIMALAKKHNLFVVED  152 (375)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcCCCC--eEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEE
Confidence            99999999999999999 8888888899999999998754  888866   46898887   889999999999999999


Q ss_pred             ece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015890          204 NTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----------------  262 (398)
Q Consensus       204 e~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~----------------  262 (398)
                      ++| ++  +.+.+.... .  .+.+.|++  |.++ +|.+.++++.+   +++.+++..++...                
T Consensus       153 ~a~a~g~~~~~~~~g~~-~--~~~~~Sf~~~K~l~-~g~gG~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  225 (375)
T PRK11706        153 AAQGVMSTYKGRALGTI-G--HIGCFSFHETKNYT-AGEGGALLIND---PALIERAEIIREKGTNRSQFFRGQVDKYTW  225 (375)
T ss_pred             CccccccccCCeeeecC-c--CEEEEeCCCCcccc-ccCCeEEEECC---HHHHHHHHHHHHcCCCcchhhccCCCccee
Confidence            999 43  344322211 1  24445654  9996 57766677655   77777666554210                


Q ss_pred             -CCCcc----hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CCccc-cCC----ccEEEEeeCCCCCC
Q 015890          263 -PICAS----IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK-GGE----GAIYLWARLPEKHL  329 (398)
Q Consensus       263 -~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~-~~~----~~~~~~~~~~~~~~  329 (398)
                       ..+.+    ....+.+...+    ..+++..++-+++.+++.+.|+.++   .+... .+.    ...++++.++.. .
T Consensus       226 ~~~g~~~~~~~~~aa~~~~ql----~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  300 (375)
T PRK11706        226 VDIGSSYLPSELQAAYLWAQL----EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-E  300 (375)
T ss_pred             eecccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-C
Confidence             01122    12222222222    2245555556666677777777654   22221 121    123455666543 3


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCC----------C-----C-------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGAC----------G-----C-------RGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~----------~-----~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +..++.+.| .++||.++.....          .     .       ...+-+-+.. .+++|++..++.|++++
T Consensus       301 ~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        301 DRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             CHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence            567777776 5889987533210          0     0       1235554554 67888888888888754

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.91  E-value=1.2e-21  Score=185.49  Aligned_cols=344  Identities=10%  Similarity=0.033  Sum_probs=223.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+....  .......+.+..+++.+.+..+...+.+++++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve  128 (453)
T PRK06943         51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVE  128 (453)
T ss_pred             CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHH
Confidence            4688999998773  3333 5899999999998763211  011112345556666666554433357999999999999


Q ss_pred             HHHHHhc-------cC-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-CC--C--------CC
Q 015890          104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TL--H--------PD  151 (398)
Q Consensus       104 ~~~~~l~-------~~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~--~--------~d  151 (398)
                      .+++...       .+ ..+|+....+|++....+-...-             .+..+ +.+.. +.  .        -+
T Consensus       129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  207 (453)
T PRK06943        129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVV-ASPDARGARPGETAADVAARA  207 (453)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEE-CCCCccccccCCCHHHHHHHH
Confidence            9999862       12 36899999999987633322110             11122 11111 10  0        12


Q ss_pred             hHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.++ ....+++|+++. .+...|. ..|++.++++.++|++||+++|.||++  |+..|........+....+-
T Consensus       208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv  287 (453)
T PRK06943        208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL  287 (453)
T ss_pred             HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE
Confidence            467777775 223478899986 3777787 468889999999999999999999999  66666433322222222244


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE  297 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~  297 (398)
                      +++|.++ .| +++|.++++   +++.+.+..      .....+++.++.+.+++.+.|+..  ++.+++..+.-...++
T Consensus       288 t~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~  363 (453)
T PRK06943        288 CLSKGIS-GGYLPLSLVLSR---DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRA  363 (453)
T ss_pred             eeehhhc-cCcccceEEEEc---HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            6789998 78 599999999   777776642      123456778999999999988752  2334444444444455


Q ss_pred             HHHHHhccCCCCccccCCccEEEEeeCCCCCCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890          298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA  372 (398)
Q Consensus       298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~  372 (398)
                      .|.+. .+.+.+.-+... |.++.+.+......    ...+...+ .++||++.+.     .+.+|+++.. .+++++++
T Consensus       364 ~L~~l-~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~-~~~Gll~~~~-----g~~l~~~Ppl~it~~eid~  435 (453)
T PRK06943        364 ALAPL-AAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAA-LERELLLRPI-----GTTVYLMPPYVLDDDEIAW  435 (453)
T ss_pred             HHHHH-hcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCcCCHHHHHH
Confidence            55543 334443334455 66666666421111    23455655 4899999763     2469999665 79999999


Q ss_pred             HHHHHHHHHHHHh
Q 015890          373 AADRLRRGLEELV  385 (398)
Q Consensus       373 ~~~~l~~~~~~~~  385 (398)
                      ++++|.++++++.
T Consensus       436 ~~~~l~~al~~~~  448 (453)
T PRK06943        436 LAERTRATLDATL  448 (453)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998863

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=8.7e-22  Score=183.64  Aligned_cols=283  Identities=18%  Similarity=0.197  Sum_probs=191.1

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~  143 (398)
                      +....+++.++++.    +.  +..+.++|+++|+.+++.+++++||+|+++.++|.+....    +...|+++.++ ..
T Consensus        61 Ptv~~lE~~la~le----g~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v-d~  133 (432)
T PRK06702         61 PTLAAFEQKLAELE----GG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF-NP  133 (432)
T ss_pred             cHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEE-CC
Confidence            44566666776665    32  4578899999999999999999999999999999866554    67889999888 32


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                           .+|++.+++++++++  ++|++++|+||++.+.+   +++|+++|+++|+++|+|+++ .++--   .+...+.+
T Consensus       134 -----~~d~~~l~~~I~~~T--k~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~---~pl~~GAD  200 (432)
T PRK06702        134 -----NLTADEIVALANDKT--KLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLC---QAFEHGAN  200 (432)
T ss_pred             -----CCCHHHHHHhCCcCC--eEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhC---ChhhcCCC
Confidence                 358899999999876  99999999999999999   999999999999999999998 33211   11223445


Q ss_pred             EEEccccccc-----CCCccee-----EEEEccCCcHHHH---------------------H-HHHHhhccCCCCcchHH
Q 015890          223 VNLFSFSKAY-----GMMGWRV-----GYIAYPSEVEGFA---------------------T-QLLKVQDNIPICASIIS  270 (398)
Q Consensus       223 i~~~s~sK~~-----~~~G~r~-----G~i~~~~~~~~~~---------------------~-~l~~~~~~~~~~~~~~~  270 (398)
                      +++.|++|.+     +++|.++     +|...++  ++++                     . ...........+++++.
T Consensus       201 Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~  278 (432)
T PRK06702        201 IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKY--PELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFN  278 (432)
T ss_pred             EEEEccccccCCCcceeceEEEeCCCcccccccc--cccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHH
Confidence            8999999944     4444444     3333221  1111                     1 11112223456778888


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChH
Q 015890          271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF  332 (398)
Q Consensus       271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~  332 (398)
                      .+.+...|+.    +..+.++..+++..+.+.|++++.+. +..|                . .+-.+.+.+...    .
T Consensus       279 a~l~~rgL~T----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~----~  350 (432)
T PRK06702        279 AYISNIGLET----LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGG----L  350 (432)
T ss_pred             HHHHHhccCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----H
Confidence            8877777775    56666667788999999998877532 2221                1 133455666421    2


Q ss_pred             HHHHHHHHhcCeEEe-------------cCCCC------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVI-------------PGGAC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~-------------~g~~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +...+++++-.+...             |.+.-            + .++.||+|++-   |+.+.+++.|.+++..
T Consensus       351 ~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~Al~~  424 (432)
T PRK06702        351 EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---EDVSDIIADLEAALVG  424 (432)
T ss_pred             HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence            223334433333221             11100            0 13589999997   6777788888888765

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.91  E-value=9.8e-22  Score=184.62  Aligned_cols=339  Identities=12%  Similarity=0.071  Sum_probs=217.4

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.....  ......+....+++.+.+..+...+.+++++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve  117 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM--FGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVE  117 (428)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc--ccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence            4689999998764  3332 47999999999987632111  11112345566667666555433468999999999999


Q ss_pred             HHHHHhcc------C-CCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCCCC-----CCChHHHHH
Q 015890          104 NIVLTLCD------A-GDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLEK  157 (398)
Q Consensus       104 ~~~~~l~~------~-gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~e~l~~  157 (398)
                      .+++....      . ..+|+....+|++....+-.. +.             .++.+ +.+...+     .-|++++++
T Consensus       118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~d~~~l~~  196 (428)
T PRK07986        118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFA-PAPQSRFDGEWDERDIAPFAR  196 (428)
T ss_pred             HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEE-CCCCcccchhhHHHHHHHHHH
Confidence            99997642      2 368999999999865433222 11             11122 1111100     125677888


Q ss_pred             hhcc-CCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEEccccc
Q 015890          158 TLET-KPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNLFSFSK  230 (398)
Q Consensus       158 ~l~~-~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~~s~sK  230 (398)
                      .++. ...+.+|+++.. +...|.. .+++.+++|.++|++||+++|+||++  ++..|........+  .+++  +++|
T Consensus       197 ~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~--t~gK  274 (428)
T PRK07986        197 LMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL--CLGK  274 (428)
T ss_pred             HHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE--Eech
Confidence            8862 223677888763 6666764 56789999999999999999999999  55555432222111  1233  5899


Q ss_pred             ccCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHH
Q 015890          231 AYGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       231 ~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~  302 (398)
                      .++ .| +.+|.++++   +++.+.+...     ....+++.++.+.+++.+.|+..+  +..++..+...+.++.+.+ 
T Consensus       275 ~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~-  349 (428)
T PRK07986        275 ALT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAP-  349 (428)
T ss_pred             hhh-CCcccCcchhch---HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-
Confidence            997 78 589998988   7888877542     234567788889988888887522  2333333333333333333 


Q ss_pred             hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.+.+.+.-+... |.+..+.+.... ....+...++ ++||++.+.     .+.+|+.... .+++++++++++|.+++
T Consensus       350 l~~~~~i~~vRg~-Gl~~~ve~~~~~-~~~~~~~~l~-~~Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~l  421 (428)
T PRK07986        350 LRDAPMVADVRVL-GAIGVVETTRPV-NMAALQRFFV-EQGVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRAV  421 (428)
T ss_pred             HhcCCCEEeEecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            2233433333344 566666665322 3456666664 899999874     2589998776 79999999999999998


Q ss_pred             HH
Q 015890          382 EE  383 (398)
Q Consensus       382 ~~  383 (398)
                      ++
T Consensus       422 ~~  423 (428)
T PRK07986        422 QD  423 (428)
T ss_pred             hh
Confidence            54

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.91  E-value=1.7e-21  Score=184.91  Aligned_cols=346  Identities=14%  Similarity=0.078  Sum_probs=221.4

Q ss_pred             HcCCCeEEcCCc-cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           27 RGAKNAVSLAQG-VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        27 ~~g~~~~~l~~g-~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      .+|+.|+||..+ ...++ .+|.+.+++.+++.+..   +.......+....+++.+.+..+...+.+++++|+++|++.
T Consensus        69 ~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~  145 (459)
T PRK06082         69 VDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGM  145 (459)
T ss_pred             CCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHH
Confidence            357889999733 23344 68999999999987632   21112224556667777766654334689999999999999


Q ss_pred             HHHHhc--cCCCEEEEeCCCCcChhhHHH-hcCcE------------EEEeccCCC-CC--CC-CC------hHHHHHhh
Q 015890          105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVT------------HILVGPCSS-KT--LH-PD------ADWLEKTL  159 (398)
Q Consensus       105 ~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~-~~--~~-~d------~e~l~~~l  159 (398)
                      +++...  ....+|+....+|++....+- ..|..            +..+ +.+. ..  +. .|      ++.+++.+
T Consensus       146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i  224 (459)
T PRK06082        146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERI-PPAVSYRGAFPDADGSDVHYADYLEYVI  224 (459)
T ss_pred             HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEe-CCCcccccccCChhHHHHHHHHHHHHHH
Confidence            998764  223689999999988764332 22211            1112 1110 00  10 01      35577777


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-  236 (398)
                      +....+++|+++..++..+...+++.++++.++|++||+++|+||++  ++..|........+....+-+++|.+| .| 
T Consensus       225 ~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~-gG~  303 (459)
T PRK06082        225 EKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLG-GGL  303 (459)
T ss_pred             hcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEeccccc-CCC
Confidence            63334788888876766555788899999999999999999999999  655554322111111111225899998 67 


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +++|.++.+   +++...........+++.++.+.+++.+.|+..  ++..++..+.-...++.|.+..++++.+.-+..
T Consensus       304 ~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG  380 (459)
T PRK06082        304 VPIAAMITK---DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRG  380 (459)
T ss_pred             CcceEEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeee
Confidence            599999988   565543321111257778899988888888752  233344444444445555554445565444555


Q ss_pred             CccEEEEeeCCCCCC----C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          315 EGAIYLWARLPEKHL----D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~----~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      . |.++.+.+.....    +   ...++..++ ++||.+.+.    ..+.+|++... .++++++++++++.+++.++.+
T Consensus       381 ~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~  454 (459)
T PRK06082        381 I-GLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS----QGNVIQLSPPLIITREELTQALAILEEAIAKICQ  454 (459)
T ss_pred             c-cceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence            5 6666666642110    1   234555554 899999773    24789999776 7999999999999999988754

>PLN02509 cystathionine beta-lyase

Probab=99.91  E-value=6.4e-22  Score=186.19  Aligned_cols=289  Identities=20%  Similarity=0.182  Sum_probs=193.9

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcE
Q 015890           61 ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVT  136 (398)
Q Consensus        61 ~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~  136 (398)
                      .+.|... +. ..++.+.++++++.+  .+..++++|+++++..++ .++++||+|+++.+.|.++..    .+...|++
T Consensus       124 ~~~Y~r~-gn-pt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~  198 (464)
T PLN02509        124 PYDYTRS-GN-PTRDALESLLAKLDK--ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVV  198 (464)
T ss_pred             CCccCCC-CC-HHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence            3456544 44 367888888877765  456677788888987655 578999999999999988763    34567888


Q ss_pred             EEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccc
Q 015890          137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHC  215 (398)
Q Consensus       137 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~  215 (398)
                      ++.+ +.      .|++++++.+++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .+..+.+. 
T Consensus       199 v~~v-d~------~d~e~l~~ai~~~T--klV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-  265 (464)
T PLN02509        199 VKRV-NT------TNLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLSRPL-  265 (464)
T ss_pred             EEEe-CC------CCHHHHHHhCCcCC--eEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccCChh-
Confidence            8877 42      26899999998765  99999999999999876   999999999999999999999 44433222 


Q ss_pred             cccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890          216 CVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  294 (398)
Q Consensus       216 ~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  294 (398)
                        ..+.+++++|++|.++.+| .-.|++++++  +.+.+.+...........++...+.+...|+.    +..+.++..+
T Consensus       266 --~~gaDivv~S~tK~l~G~gdv~gG~v~~~~--~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t----L~~R~~r~~~  337 (464)
T PLN02509        266 --ELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQE  337 (464)
T ss_pred             --hcCCcEEEecCcccccCCCccceeEEEecc--HHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh----HHHHHHHHHH
Confidence              1234588999999996423 3467777654  45555554443333334455555555545543    6778888889


Q ss_pred             HHHHHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeE---EecCCCC--
Q 015890          295 NREIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC--  352 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~--  352 (398)
                      ++..+.+.|++++.+ +|..|.                .+-.+.+.+. .    .+...++++.-.+.   +.-|...  
T Consensus       338 nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~----~~~~~~f~~~l~l~~~a~slG~~~SL  412 (464)
T PLN02509        338 NARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-S----VALSKHLVETTKYFSIAVSFGSVKSL  412 (464)
T ss_pred             HHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-C----HHHHHHHHHcCCcceEcccCCCCCce
Confidence            999999999987764 233221                1223444552 1    23333344333322   1111100  


Q ss_pred             --------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 --------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 --------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                          + .++.||+|++-   |+.+.+++.|.++++.
T Consensus       413 i~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~~  461 (464)
T PLN02509        413 ISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFRT  461 (464)
T ss_pred             eeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHcc
Confidence                                0 13689999997   6777888888888754

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.91  E-value=4e-22  Score=187.75  Aligned_cols=159  Identities=23%  Similarity=0.290  Sum_probs=128.7

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~  141 (398)
                      +.+...++++.++++.    |.  +..++++|+++|+..++.+++++||+|+++.+.|++..    ..++..|++++.+ 
T Consensus        55 ~~p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-  127 (418)
T TIGR01326        55 MNPTTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV-  127 (418)
T ss_pred             CChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE-
Confidence            3444566777777665    43  46788999999999999999999999999999996543    3456789999888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| .++...+   ...+
T Consensus       128 ~~~------d~~~l~~~l~~~t--~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~~~---l~~g  193 (418)
T TIGR01326       128 DPD------DPEEFEKAIDENT--KAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLCRP---IDHG  193 (418)
T ss_pred             CCC------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcCCc---hhcC
Confidence            532      7899999998765  99999999999999998   899999999999999999999 4322111   2234


Q ss_pred             cEEEEcccccccCCCcceeEEEEcc
Q 015890          221 HVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      .++++.|++|.++.+|.|+|+++++
T Consensus       194 ~Divv~S~sK~l~g~G~~lGg~v~~  218 (418)
T TIGR01326       194 ADIVVHSATKYIGGHGTAIGGVIVD  218 (418)
T ss_pred             CeEEEECccccccCCccceEEEEEe
Confidence            6799999999999889999998886

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.91  E-value=1.9e-21  Score=185.79  Aligned_cols=344  Identities=14%  Similarity=0.085  Sum_probs=220.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQA  101 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a  101 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +... ....+....+++.+.+.+ +.+-+.++++++|++|
T Consensus        86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA  163 (504)
T PLN02760         86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEA  163 (504)
T ss_pred             CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHH
Confidence            4689999998863  3443 689999999999876321  1111 123445566666665543 2233579999999999


Q ss_pred             HHHHHHHhc------c-CC-CEEEEeCCCCcChhhHHHh-cCcE------------EEEeccCCC-CCC----C------
Q 015890          102 FVNIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQM-TGVT------------HILVGPCSS-KTL----H------  149 (398)
Q Consensus       102 ~~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~-~~~----~------  149 (398)
                      ++.+++...      . ++ .+|+....+|++.....-. .|..            +... +.+. ..+    .      
T Consensus       164 ~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~  242 (504)
T PLN02760        164 NDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHT-DCPHYWRFHLPGETEEEFS  242 (504)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEe-CCCcccccCCCCCcHHHHH
Confidence            999999874      1 23 6899999999887543322 2211            1111 1110 000    0      


Q ss_pred             -CChHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890          150 -PDADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       150 -~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i  223 (398)
                       ...+++++.+.  ....+++|+++..+...|.+ .|++.+++|.++|++||+++|+||++  |+..|........+...
T Consensus       243 ~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~P  322 (504)
T PLN02760        243 TRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKP  322 (504)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCC
Confidence             01245666664  22336888888777777875 57888999999999999999999999  76666543322222223


Q ss_pred             EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLV  293 (398)
Q Consensus       224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~  293 (398)
                      .+.+++|.+| .| +++|.++++   +++.+.+..       .....+++.++.+.+++.+.|+...  +.+++..+...
T Consensus       323 DivtlgK~lg-gG~~PigAv~~~---~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~  398 (504)
T PLN02760        323 DLVSLAKALS-SAYMPIGAVLVS---PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAP  398 (504)
T ss_pred             cEEEeccccc-CCccccceEeec---HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            3568899997 56 489999998   788777653       1234577889999999999987522  22333333333


Q ss_pred             HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC--C--------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890          294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL--D--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG  363 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~  363 (398)
                      ..++.|.+. .+.+.+.-+... |.++.+.+.....  +        ...+...++ ++||.+.+.     .+.+|+++.
T Consensus       399 ~l~~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~lrl~Pp  470 (504)
T PLN02760        399 RFQDGIKAF-SGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVA-----GDNIMMSPP  470 (504)
T ss_pred             HHHHHHHHH-hcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEec-----CCEEEEECC
Confidence            334444332 444443334455 5666666632110  0        234556554 899999763     257999977


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHh
Q 015890          364 G-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       364 ~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      . .+++|++++++++.+++.++.
T Consensus       471 l~it~eeid~~~~~l~~al~~~~  493 (504)
T PLN02760        471 LIITPEEVDELISIYGKALKATE  493 (504)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH
Confidence            6 699999999999999998764

>PRK05965 hypothetical protein; Provisional

Probab=99.91  E-value=3.1e-21  Score=183.30  Aligned_cols=347  Identities=15%  Similarity=0.098  Sum_probs=223.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.. +.........+.+..+++.+....+.+.+.+++++++++|++
T Consensus        43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~-~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve  121 (459)
T PRK05965         43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELP-YATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD  121 (459)
T ss_pred             CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcC-CcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence            4689999998764  3332 58999999999987632 101000112344456666666554434568999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CC--CCCC--------
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KT--LHPD--------  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~--~~~d--------  151 (398)
                      .+++....       ++ .+|+....+|++....+... +.            .+..+ +.+. ..  +.-|        
T Consensus       122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  200 (459)
T PRK05965        122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKI-PSPYPYRNPVGDDPQAIIAAS  200 (459)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEc-CCCcccccccCCChHHHHHHH
Confidence            99987541       22 57999999999976432111 11            01122 1110 00  0112        


Q ss_pred             hHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.++.  ...+++|+++..+...|.+ .|++.++++.++|++||+++|.||++  |+..|........+....+-
T Consensus       201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv  280 (459)
T PRK05965        201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM  280 (459)
T ss_pred             HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence            2567777752  1347899999777777874 67789999999999999999999999  66666443332222223344


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  296 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  296 (398)
                      +++|.++ .| +++|.++++   +++.+.+..       .....+++.++.+.+++.+.|+..  ++.+++..+.-....
T Consensus       281 ~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~  356 (459)
T PRK05965        281 TVAKGLT-SGYVPMGAVLMS---DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFA  356 (459)
T ss_pred             Eechhhc-cCCcceeEEEEc---HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            7789997 78 499999999   788776642       223457788999999999988752  123333333334444


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +.+.+. .+.+.+.-+... |.++.+.+....      .    -...+...+ .++||++.+.    ..+.||+.+.- .
T Consensus       357 ~~l~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~~~----g~~~i~~~PpL~i  429 (459)
T PRK05965        357 AGLDAL-RAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRA-YANGLVFRAF----GDGVLGFAPALCC  429 (459)
T ss_pred             HHHHhh-ccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHH-HhCCeEEEec----CCcEEEEECCCcC
Confidence            444442 334543334455 566666663211      0    023455555 4899999763    24679998776 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++++++|.++++++..
T Consensus       430 t~~ei~~~~~~l~~~l~~~~~  450 (459)
T PRK05965        430 TEGEFDLIFERTRKTLDDVLA  450 (459)
T ss_pred             CHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999998744

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=7.4e-22  Score=166.00  Aligned_cols=329  Identities=18%  Similarity=0.203  Sum_probs=227.4

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      ..+||-.- .-..|..+++++|.++...++.  |+.++....|++..++.++      .+.-+|++|+|.++.++++.-+
T Consensus        22 ~~vDLRSD-TvT~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G------KEAgLFv~SGTmgNllaIm~Hc   92 (384)
T KOG1368|consen   22 RSVDLRSD-TVTVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG------KEAGLFVPSGTMGNLLAIMVHC   92 (384)
T ss_pred             eccccccc-cccCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC------ccceeeecccccccHHHHHHHh
Confidence            34555433 2334689999999998776544  5555556788888888874      4556788888899999998877


Q ss_pred             -cCCCEEEEeCCCC-cChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc------cCCCCeEEEEeCCCCCCc-c
Q 015890          111 -DAGDSVVMFAPYY-FNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE------TKPTPKLVSVVNPGNPSG-T  179 (398)
Q Consensus       111 -~~gd~Vl~~~p~~-~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~------~~~~~~~v~i~~p~nptG-~  179 (398)
                       ++|.+||+.+-+| +.|.  ......|+.+..+ ... ++..+++++||+.++      +.+..++|++.+-+|.+| .
T Consensus        93 ~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv-~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~  170 (384)
T KOG1368|consen   93 HQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV-KNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGK  170 (384)
T ss_pred             cCCCceEEeccchheeehhccChhhhccceeEee-eeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCce
Confidence             5899999999888 3333  2445667777777 333 334689999999998      234468999998765555 8


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      ++|.|++.++.+||++||+.++.|.+. |..   .+.+..-.-...+-+.-.+||.+|.|   +|.++..+  ++++++-
T Consensus       171 vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~--k~FI~kA  245 (384)
T KOG1368|consen  171 VLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGS--KDFIDKA  245 (384)
T ss_pred             EeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEcc--HHHHHHH
Confidence            999999999999999999999999998 322   23222111011112233678998644   67655443  7888887


Q ss_pred             HHhhccCCCCcchHHH--HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChH
Q 015890          256 LKVQDNIPICASIISQ--HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       256 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  332 (398)
                      ...+.....++-....  +++.-+|++  .+  ...+.-.+++..+.+.+...+.+++.-+ ...+++.+.+-....+..
T Consensus       246 ~~~RKalGGGmRQsGvLaaaaLval~~--~~--~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~  321 (384)
T KOG1368|consen  246 RHFRKALGGGMRQSGVLAAAALVALDE--NV--PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAE  321 (384)
T ss_pred             HHHHHHhcCchhHHHHHHHHHHHHhhc--ch--HHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHH
Confidence            7666655555544444  444444443  22  2445556677778888887775555444 447888777755556888


Q ss_pred             HHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH-HHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR-RGLEEL  384 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~-~~~~~~  384 (398)
                      ++++.+ +++||.+.++.    ...+|+.+.+ .+.++++.....+. .++.+.
T Consensus       322 ~l~~~~-~k~gi~lm~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~  370 (384)
T KOG1368|consen  322 ELCKFL-EKNGILLMGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL  370 (384)
T ss_pred             HHHHHH-HHCCeEEeecc----ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence            999987 58999999875    4459999999 89999999999984 444443

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.91  E-value=3.3e-21  Score=183.08  Aligned_cols=344  Identities=13%  Similarity=0.077  Sum_probs=223.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.. +.. ......+.+..+++.+....+...+.+++++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~-~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  121 (466)
T PRK07030         44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLE-HVI-LAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIE  121 (466)
T ss_pred             CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcC-Ccc-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            4688999998764  3333 58999999999987631 111 11122345566677666554433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCC-----CC------CCC
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSK-----TL------HPD  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~-----~~------~~d  151 (398)
                      .+++....       +| .+|+....+|++....+-..+..             +..+ |.+..     +.      .-+
T Consensus       122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  200 (466)
T PRK07030        122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKV-PSPDCYLRPEGMSWEEHSRRM  200 (466)
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEc-CCCCccccccCCCHHHHHHHH
Confidence            99998631       23 57999999999976544332211             1112 11110     00      002


Q ss_pred             hHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.++ ....+++|+++. .+...|. ..+++.++++.++|++||+++|+||++  |+..|........+....+-
T Consensus       201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv  280 (466)
T PRK07030        201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL  280 (466)
T ss_pred             HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence            456677775 223478888886 4666777 467789999999999999999999999  66666433222222222344


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNR  296 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~  296 (398)
                      +++|.++ .| +++|.++++   +++.+.+..       .....+++.++.+.+++.+.|+..+  +.+++..+.-.+.+
T Consensus       281 ~~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~  356 (466)
T PRK07030        281 CLSKALT-GGYLPLAAVLTT---DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMA  356 (466)
T ss_pred             eeehhcc-CCcccceEEEec---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            6789998 78 499999999   788776642       2344577789999999999887522  33333333334444


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +.+.+. .+.+.+.-+... |.++.+.+.+...       +   ...+...++ ++|+.+.+.     .+.+|+.+.. .
T Consensus       357 ~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~i~~~Ppl~i  428 (466)
T PRK07030        357 EATAHL-ADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-----GSVVYFLPPYVI  428 (466)
T ss_pred             HHHHHH-hcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCccC
Confidence            444433 344543334455 6667776642110       0   124556554 899999763     2579998666 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHh
Q 015890          366 VEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +++++++++++|.++++++.
T Consensus       429 t~~eid~~~~~l~~al~~~~  448 (466)
T PRK07030        429 TPEQIDFLAEVASEGIDIAT  448 (466)
T ss_pred             CHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999984

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.91  E-value=5.5e-21  Score=179.02  Aligned_cols=309  Identities=19%  Similarity=0.146  Sum_probs=210.6

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      +++-++++.+.+....   |...+...++++.++++++    .  ++.++++|+++|+..++.++ +++||+|+++.++|
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g----~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~   79 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG----A--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITF   79 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC----C--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcch
Confidence            4566778888776542   3345567889999999884    3  34566778899999999998 78999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (398)
                      ..+...++..|++++.+ +.+++.+.+|++++++.++    ++  +++|+++   |++|...+   +++|.++|+++|++
T Consensus        80 ~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~~--t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~  150 (380)
T TIGR03588        80 VATANCALYCGAKVDFV-DIDPDTGNIDEDALEKKLAAAKGKL--PKAIVPV---DFAGKSVD---MQAIAALAKKHGLK  150 (380)
T ss_pred             HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHhhcccCCC--ceEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence            99998899999999999 8876667789999999998    44  4888755   46898888   89999999999999


Q ss_pred             EEEeece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------
Q 015890          200 LVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------  262 (398)
Q Consensus       200 livDe~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~------------  262 (398)
                      +|+|++| ++  +++.+..... ..++.+.|++  |.++.+  ..|+++.++  +++.++++......            
T Consensus       151 lI~D~a~a~g~~~~~~~~g~~~-~~d~~~~S~~~~K~~~~~--~GG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~  225 (380)
T TIGR03588       151 IIEDASHALGAEYGGKPVGNCR-YADATVFSFHPVKIITTA--EGGAVTTND--EELAERMRLLRSHGITKDPLLFEKQD  225 (380)
T ss_pred             EEEECCCcccCccCCEeCCCcc-ccceEEEecCCCCccccc--CceEEEECC--HHHHHHHHHHHHCCCCCCcccccccc
Confidence            9999999 43  3343222200 1235566765  888632  467777776  67777765433210            


Q ss_pred             -------------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----cc-EEEEeeC
Q 015890          263 -------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARL  324 (398)
Q Consensus       263 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~-~~~~~~~  324 (398)
                                   .+.++....+.+...|+    .+++..++-+++.+++.+.|+.++.+.+..+.    .. ....+.+
T Consensus       226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~----~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~  301 (380)
T TIGR03588       226 EGPWYYEQQELGFNYRMTDIQAALGLSQLK----KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILL  301 (380)
T ss_pred             cCcceeeeeccccccCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEE
Confidence                         01112222222222332    24666677777888899999888765543321    11 2233344


Q ss_pred             CC-CCCChHHHHHHHHHhcCeEEecCCCC-----------C---C-------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          325 PE-KHLDDFEVVRWLAHRHGVVVIPGGAC-----------G---C-------RGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       325 ~~-~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~---~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +. ...+..++.+.| +++||.++....+           .   .       ...+++.+.. .+++|++..++.|++++
T Consensus       302 ~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       302 DQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL  380 (380)
T ss_pred             CCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence            32 123567777776 5889988744321           0   0       1468887776 78999999999888763

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK06105 aminotransferase; Provisional

Probab=99.91  E-value=1.9e-21  Score=184.75  Aligned_cols=347  Identities=14%  Similarity=0.081  Sum_probs=224.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.... ........+.+..+++.+.+..+.+-+.+++++++++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  123 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFY-HTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND  123 (460)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCe-ecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4689999998764  3333 5899999999998763210 1111122345556666666655433467999999999999


Q ss_pred             HHHHHhc------c-CC-CEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCC-CCCC-----------C
Q 015890          104 NIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-KTLH-----------P  150 (398)
Q Consensus       104 ~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-~~~~-----------~  150 (398)
                      .+++...      . ++ .+|+....+|++....+-.. +.            .+..+ +.+. ..+.           .
T Consensus       124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  202 (460)
T PRK06105        124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHT-GCPHYYRFGLPGESEEAFATR  202 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEc-CCCcccccccCCCChHHHHHH
Confidence            9999853      1 23 58999999998876433221 11            01111 1110 0000           0


Q ss_pred             ChHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          151 DADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       151 d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      .++++++.+.  ....+++|+++..+...|.. .+++.++++.++|++||+++|+||++  ++..|........+....+
T Consensus       203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi  282 (460)
T PRK06105        203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDI  282 (460)
T ss_pred             HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCe
Confidence            1356777774  22347889988777777875 68889999999999999999999999  6655543332222222334


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN  295 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~  295 (398)
                      .+++|.++ .| +++|+++++   +++.+.+...       ....+++.|+.+.+++.+.|+..  ++.+++..+.-...
T Consensus       283 ~~~gK~lg-gG~~P~~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l  358 (460)
T PRK06105        283 LVMSKQLS-SSYQPLSAVLMN---EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARL  358 (460)
T ss_pred             eeeecccc-cCcccceEEEEc---HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence            58899997 56 689999999   7887776532       13456778889998888888752  23334444444444


Q ss_pred             HHHHHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890          296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  364 (398)
Q Consensus       296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-  364 (398)
                      ++.|.+. ++++.+..+... |.+..+.+.....      .    ...+...+ .++||.+.+.     .+.+|+++.. 
T Consensus       359 ~~~L~~l-~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~-~~~Gvl~~~~-----g~~i~l~Ppl~  430 (460)
T PRK06105        359 QARLRAL-ADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAA-HEHGVISRAM-----GDTLAFCPPLI  430 (460)
T ss_pred             HHHHHHh-hcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHH-HHCCeEEEec-----CCEEEEECCCc
Confidence            5555543 555544444455 6666666532110      0    13455555 4899999873     2589999776 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          365 LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .+++|+++++++|.++++++...
T Consensus       431 it~~eid~~~~~l~~~l~~~~~~  453 (460)
T PRK06105        431 ITAAQVDEMVDRFGRALDDVAAW  453 (460)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999887653

>PRK06917 hypothetical protein; Provisional

Probab=99.91  E-value=5.2e-21  Score=181.13  Aligned_cols=353  Identities=13%  Similarity=0.095  Sum_probs=226.7

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.. +.+. .....+.+..+++.+....+...+.+++++++++|++
T Consensus        28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~-~~~~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  105 (447)
T PRK06917         28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVS-FVYR-SQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANE  105 (447)
T ss_pred             CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCc-Cccc-cccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHH
Confidence            5789999998774  3343 58999999999987632 2211 1112345566777776655433457999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-CcE------------EEEeccCCC-CC--CC--------CC
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GVT------------HILVGPCSS-KT--LH--------PD  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~-~~--~~--------~d  151 (398)
                      .+++....       +| .+|+....+|+++...+-.. +..            +..+ +.+. ..  +.        -+
T Consensus       106 ~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  184 (447)
T PRK06917        106 TAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTI-SAPYCYRCPVQKVYPTCQLAC  184 (447)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEe-CCCcccccccCCChHHHHHHH
Confidence            99998631       23 68999999999977544221 110            1111 1110 00  00        02


Q ss_pred             hHHHHHhhccC--CCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          152 ADWLEKTLETK--PTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       152 ~e~l~~~l~~~--~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      ++.+++.++..  ..+++|+++..+. ..|. ..+++.++++.++|++||+++|+||++  |+..|........+....+
T Consensus       185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi  264 (447)
T PRK06917        185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI  264 (447)
T ss_pred             HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence            45667777622  2378899986554 3445 567889999999999999999999999  6555543322212212224


Q ss_pred             cccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREI  298 (398)
Q Consensus       226 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~  298 (398)
                      .+++|.++ .|+ ++|.++++   +++.+.+...    ....+++.++...+++.+.|+..  .+.+++..+.-.+.++.
T Consensus       265 ~~~gK~l~-~G~~Pi~a~~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~  340 (447)
T PRK06917        265 MTLGKGLG-AGYTPIAATVVS---DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKG  340 (447)
T ss_pred             EEeeehhc-cCCcceEEEEEc---HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence            47799997 785 89999998   7887776532    22346778899999999988752  23344444444445555


Q ss_pred             HHHHhccCCCCccccCCccEEEEeeCCCCC------CC----hHHHHHHHHHhcCeEEecCCC-C-C-CCCeEEEEecC-
Q 015890          299 IREALSPLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGA-C-G-CRGHLRISFGG-  364 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~ll~~~gi~v~~g~~-~-~-~~~~iRi~~~~-  364 (398)
                      |.+..++.+.+.-+... |.++.+.+.+..      ..    ...++..++ ++||.+.+... . + ..+.+|++... 
T Consensus       341 L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~  418 (447)
T PRK06917        341 LQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMT  418 (447)
T ss_pred             HHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCc
Confidence            55555556554444455 566656553110      01    234555554 89999987531 1 1 24689999775 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhccc
Q 015890          365 LVEDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                      .+++|+++++++|.++++++.+++
T Consensus       419 it~~eid~~~~~l~~~l~~~~~~~  442 (447)
T PRK06917        419 ITYSELDELLSIFAKSVEEMMQKG  442 (447)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhc
Confidence            699999999999999999886543

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.91  E-value=3.4e-21  Score=182.50  Aligned_cols=348  Identities=12%  Similarity=0.082  Sum_probs=220.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+....  .......+....+++.+.+..+...+.+.+++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e  127 (457)
T PRK05639         50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHS--MIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVD  127 (457)
T ss_pred             CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccc--ccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHH
Confidence            4688999998774  3333 5899999999998763211  111111234445666665554433468999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCC-CC--CC----CCh--------
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS-KT--LH----PDA--------  152 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~--~~----~d~--------  152 (398)
                      .+++...  ....+|+....+|++....+... |.             .+..+ |.+. ..  +.    .+.        
T Consensus       128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~  206 (457)
T PRK05639        128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWI-PYPNPYRNPWGINGYEEPDELINRFL  206 (457)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEe-CCCccccccccccccCCHHHHHHHHH
Confidence            9999864  23368999999999976533221 10             12222 2211 00  00    022        


Q ss_pred             HHHHHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          153 DWLEKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       153 e~l~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      +.+++.+.    ....+++|+++..+...|.+ .|++.++++.++|++||+++|+||++  |+..|........+....+
T Consensus       207 ~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi  286 (457)
T PRK05639        207 DYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDL  286 (457)
T ss_pred             HHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCE
Confidence            23555442    12347899999777777874 57889999999999999999999999  6555543222111111122


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      -+++|.++ .|+++|+++++   +++.+ ........+++.++...+++.+.|+..  ++.+++..+.-...++.|.+..
T Consensus       287 v~~gK~l~-gG~pi~av~~~---~~i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~  361 (457)
T PRK05639        287 IIFGKGVA-SGMGLSGVIGR---KELMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMK  361 (457)
T ss_pred             EEechhhc-CCCcceeEEeh---HHHHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence            24799997 78999999998   67766 222122346677888888888888752  2333444444444455555544


Q ss_pred             ccCCCCccccCCccEEEEeeCCCCCC--C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          304 SPLGEGAVKGGEGAIYLWARLPEKHL--D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                      .+.+.+.-+... |.++.+.+.....  +   ...++..++ ++|+++.+...  ..+.+|+.+.. .+++++++++++|
T Consensus       362 ~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g~--~~~~lr~~Ppl~it~~~id~~~~~l  437 (457)
T PRK05639        362 ESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYGM--FGNVIRITPPLVITKEIAEKGLEIM  437 (457)
T ss_pred             HhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHH
Confidence            555544444555 5666666532110  1   234555554 79999976421  24789999887 8999999999999


Q ss_pred             HHHHHHHhc
Q 015890          378 RRGLEELVK  386 (398)
Q Consensus       378 ~~~~~~~~~  386 (398)
                      .+++.++.+
T Consensus       438 ~~~l~~~~~  446 (457)
T PRK05639        438 ERAIKDALA  446 (457)
T ss_pred             HHHHHHHHH
Confidence            999988754

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=1.2e-21  Score=181.94  Aligned_cols=213  Identities=21%  Similarity=0.219  Sum_probs=153.2

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~  143 (398)
                      +...++++.++++.    |.+ .. +++++++.++..++ .++++||+|+++.|.|.+...    .++..|++++.+ +.
T Consensus        50 p~~~~Le~~lA~l~----g~~-~~-~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~  121 (377)
T PRK07671         50 PTRAALEELIAVLE----GGH-AG-FAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV-DT  121 (377)
T ss_pred             hHHHHHHHHHHHHh----CCC-ce-EEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE-CC
Confidence            33455666666554    543 33 44555667887665 577899999999999975443    345578998888 43


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                            .|++.+++++++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| ..+...+.   ..+.+
T Consensus       122 ------~d~~~l~~ai~~~t--klV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~p~---~~g~D  187 (377)
T PRK07671        122 ------SNLEEVEEAIRPNT--KAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQSPI---SLGAD  187 (377)
T ss_pred             ------CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCChh---hhCCe
Confidence                  27899999998765  99999999999999988   999999999999999999999 43322221   23446


Q ss_pred             EEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       223 i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  301 (398)
                      +++.|++|.++.++ .-.|++++++  +++++.+...+.......++...+.+...++    .+..+.++.+++...+.+
T Consensus       188 ivv~S~sK~l~G~~~~~~G~~v~~~--~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~~la~  261 (377)
T PRK07671        188 IVLHSATKYLGGHSDVVAGLVVVNS--PELAEDLHFVQNSTGGILGPQDSWLLLRGLK----TLGIRMEEHETNSRAIAE  261 (377)
T ss_pred             EEEecCcccccCCccceeEEEEeCc--HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHHHHHH
Confidence            88999999997332 3467777764  6788888777665455555555544443333    356677788888999999


Q ss_pred             HhccCCC
Q 015890          302 ALSPLGE  308 (398)
Q Consensus       302 ~l~~~~~  308 (398)
                      .|++.+.
T Consensus       262 ~L~~~~~  268 (377)
T PRK07671        262 FLNNHPA  268 (377)
T ss_pred             HHHcCCC
Confidence            9987765

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.91  E-value=2.5e-21  Score=183.73  Aligned_cols=345  Identities=14%  Similarity=0.097  Sum_probs=222.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-----CCCcEEEecCh
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGA   98 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-----~~~~v~~~~g~   98 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+-. + ........+.+..+++.+....+.     +.+.+++++++
T Consensus        61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~-~-~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG  138 (472)
T PRK08742         61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELE-Q-VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG  138 (472)
T ss_pred             CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCC-C-ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence            4688999998774  3333 58999999999886421 1 101111234456666666654432     23589999999


Q ss_pred             HHHHHHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-C--CC-----
Q 015890           99 NQAFVNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-T--LH-----  149 (398)
Q Consensus        99 t~a~~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~--~~-----  149 (398)
                      ++|++.+++....       +| .+|+....+|++....+-..+.             .+..+ |.+.. .  +.     
T Consensus       139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~-~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA-PSPDAYLAEPGQSAED  217 (472)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe-CCCCccccccCCCHHH
Confidence            9999999998642       22 6899999999997644432221             11122 11110 0  00     


Q ss_pred             ---CChHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCc
Q 015890          150 ---PDADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDH  221 (398)
Q Consensus       150 ---~d~e~l~~~l~-~~~~~~~v~i~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~  221 (398)
                         -+++.+++.++ ....+.+|+++. .++..|. ..|++.++++.++|++||+++|.||++  |+..|........+.
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv  297 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV  297 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC
Confidence               02466777775 223478888886 4677787 567889999999999999999999999  666664433322222


Q ss_pred             EEEEcccccccCCCcc-eeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLV  293 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~  293 (398)
                      ...+-+++|.++ +|+ ++|.++++   +++.+.+..      .....+++.++.+.+++.+.|+..+ +.+.++.+...
T Consensus       298 ~PDiv~~gKgl~-gG~~Plaav~~~---~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g  373 (472)
T PRK08742        298 MPDLLCLSKGLT-GGFLPLSAVLAT---QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTA  373 (472)
T ss_pred             CCCEEEEccccc-CCCCCcceeecc---HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            233446789997 784 99999999   777776642      1234577789999999999887522 22223333332


Q ss_pred             HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890          294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG  363 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~  363 (398)
                      +....+.+.+++++.+.-+... |+++.+.+.....       +   ...+...++ ++||++.+.     .+.|||.+.
T Consensus       374 ~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~vi~~~Pp  446 (472)
T PRK08742        374 ARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL-----GDVLYWMPP  446 (472)
T ss_pred             HHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECC
Confidence            2222344445556654445555 6667776642110       0   123455554 899999873     268999988


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHh
Q 015890          364 G-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       364 ~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      - .+++++++++++|.++++++.
T Consensus       447 L~it~~ei~~~~~~l~~~l~~~~  469 (472)
T PRK08742        447 YCVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHh
Confidence            7 799999999999999998764

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.91  E-value=2.8e-21  Score=181.83  Aligned_cols=340  Identities=13%  Similarity=0.074  Sum_probs=218.7

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ -+|++.+++.+++.+..  .+.......+.+..+++.+....+...+.+++++++++|++
T Consensus        41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve  118 (429)
T PRK06173         41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMS--HIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVE  118 (429)
T ss_pred             CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcC--CccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHH
Confidence            4689999998763  3332 57999999999987632  11111112344455666665544433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCCCC-----CCChHHHH
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLE  156 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~e~l~  156 (398)
                      .+++....       +| .+|+....+|++....+-.. +.             .+..+ |.+...+     .-+++.++
T Consensus       119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~l~~l~  197 (429)
T PRK06173        119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFL-PQPSIKFGEEWNDEAIEPLQ  197 (429)
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEe-CCCCcccchhHHHHHHHHHH
Confidence            99987642       23 57999999998854222111 10             11122 2111100     01356677


Q ss_pred             Hhhc-cCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccc
Q 015890          157 KTLE-TKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~-~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~s  229 (398)
                      +.+. ....+++|+++.. ++..|.. .|++.++++.++|++||+++|+||++  ++..|........  ..+++  +++
T Consensus       198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--~~g  275 (429)
T PRK06173        198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIM--CIG  275 (429)
T ss_pred             HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEE--Eee
Confidence            7775 2234788998864 7777875 78889999999999999999999999  5555543222111  12244  489


Q ss_pred             cccCCCc-ceeEEEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          230 KAYGMMG-WRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       230 K~~~~~G-~r~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      |.++ .| +.++.++.+   +++.+.+..     .....+++.++...+++.+.|+...+  +...++.+++.+++.+.|
T Consensus       276 K~l~-gG~~p~~a~~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L  349 (429)
T PRK06173        276 KALT-GGYLTLSATITT---EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE--SPWQQNIQRIEAQLKQEL  349 (429)
T ss_pred             hhhh-CCccccceEEec---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence            9997 77 478999988   777777642     12334566788888888888875221  122344444455555555


Q ss_pred             cc---CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          304 SP---LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       304 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      ++   .+.+.-+... +.++.+.+... .+...+...+. ++||++.+.     .+.||+.+.. .+++++++++++|.+
T Consensus       350 ~~~~~~~~v~~vRg~-Gl~~~iel~~~-~~~~~i~~~l~-e~Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~  421 (429)
T PRK06173        350 APAAEFDSVAEVRVL-GAIGVVEMKEP-VNMATLQPRFV-EHGIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLR  421 (429)
T ss_pred             HHhhcCCCeeeeecc-ceEEEEEeCCc-ccHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHH
Confidence            43   2322222244 66676777532 13456676664 889999774     2589999887 799999999999999


Q ss_pred             HHHHHh
Q 015890          380 GLEELV  385 (398)
Q Consensus       380 ~~~~~~  385 (398)
                      ++.++.
T Consensus       422 ~l~~~~  427 (429)
T PRK06173        422 VLKQEY  427 (429)
T ss_pred             HHHHHh
Confidence            998754

>PRK07483 hypothetical protein; Provisional

Probab=99.91  E-value=6.3e-21  Score=180.37  Aligned_cols=351  Identities=15%  Similarity=0.124  Sum_probs=226.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+++.+++.+...  +.......+....+++.+....+...+.+++++++++|++
T Consensus        27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve  104 (443)
T PRK07483         27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY--AHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVE  104 (443)
T ss_pred             CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHH
Confidence            4789999998874  3343 689999999999876321  1111112344556666666554433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCC-CCCCC---C--------
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCS-SKTLH---P--------  150 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~-~~~~~---~--------  150 (398)
                      .+++....       ++ .+|+....+|++....+-....             .+..+ +.. .....   .        
T Consensus       105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  183 (443)
T PRK07483        105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHV-SPCYAYREQRAGESDEAYGQR  183 (443)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEe-CCCccccccccCCCHHHHHHH
Confidence            99997542       33 5799999999987643322210             11112 111 01000   0        


Q ss_pred             ChHHHHHhhc--cCCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890          151 DADWLEKTLE--TKPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       151 d~e~l~~~l~--~~~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~  224 (398)
                      .++.+++.+.  ....+++|+++..+. ..|. ..+++.++++.++|++||+++|+||++  |+..|........+....
T Consensus       184 ~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD  263 (443)
T PRK07483        184 LADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD  263 (443)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC
Confidence            0256666554  223378888886664 3465 567889999999999999999999999  665554333222222222


Q ss_pred             EcccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHH
Q 015890          225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNRE  297 (398)
Q Consensus       225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~  297 (398)
                      +-+++|.++ .|+ ++|.++.+   +++.+.+...    ....+++.++.+.+++.+.|+..  ++.+++..+.-...++
T Consensus       264 iv~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~  339 (443)
T PRK07483        264 LVTIAKGLG-AGYQPIGAVLAS---DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRA  339 (443)
T ss_pred             eeeehhhhc-cCccccEEEEEc---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            447789997 785 99999999   7777766432    23457778999999999988752  2344444444555566


Q ss_pred             HHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCC--C-CCCeEEEEecC
Q 015890          298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG  364 (398)
Q Consensus       298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~--~-~~~~iRi~~~~  364 (398)
                      .|.+.+++++.+.-+... |.++.+.+.+..      .    ....++..++ ++|+++.+....  + ..+.|||....
T Consensus       340 ~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~PpL  417 (443)
T PRK07483        340 RLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAPPF  417 (443)
T ss_pred             HHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEECCC
Confidence            666666666654444455 566666653211      0    0234556555 899999875321  1 14689999877


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhc
Q 015890          365 -LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                       .+++++++++++|.+++.++..
T Consensus       418 ~it~~eid~~~~~l~~~l~~~~~  440 (443)
T PRK07483        418 IITAAQIDEIVERLGDAIDAALA  440 (443)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh
Confidence             7999999999999999987653

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.91  E-value=2e-21  Score=178.37  Aligned_cols=313  Identities=12%  Similarity=0.105  Sum_probs=220.4

Q ss_pred             CCcHHHHHHHHHhhcC---CCCCCCCCCC---CcHHHHHHHHHHHhhhcCCC-CCcEEEecC-hHHHHHHHHHHhccCCC
Q 015890           43 QPPKMAMEKVKELVWD---PSISKYGADE---GLPELRDALVKKLNQENKLY-KSSVMVTAG-ANQAFVNIVLTLCDAGD  114 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~---~~~~~y~~~~---~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g-~t~a~~~~~~~l~~~gd  114 (398)
                      ..|..|++++.+.+.+   .....|....   .+.++.+.+.+.++++++.+ ..+|++++| +|.++++++.++..+|+
T Consensus         2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            3588999999998874   2233443333   23367777777788888863 446777755 99999999999999999


Q ss_pred             EEEEeCCCCcC--hhhHHHhcCcEEEEeccCCC---CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          115 SVVMFAPYYFN--SYMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       115 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~---~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      ++++...+.++  +.+.++.+|. +..+ ..++   .+-.++++.++  +++  .+++|.+++..|.||+..+       
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~v~~th~ETstGv~~~-------  148 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVV-ASGKEGNYTKIPDPSTWE--ISE--DAAYVHYCANETIHGVEFR-------  148 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEE-eccccCCCCCCCCHHhcC--CCC--CCCEEEEcCCCCcccEecc-------
Confidence            99998888865  5678888998 6655 4332   22234555554  233  3699999999999999865       


Q ss_pred             HHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh----------
Q 015890          190 SDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----------  258 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~----------  258 (398)
                       ++++.+++++++|.++ ++.......  ..+  ++++|.+|++|++|  +|.++.+   +++++++...          
T Consensus       149 -~l~~~~~~l~iVDavss~g~~~id~~--~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~~~~~~~~~~~~~~~~~~  218 (349)
T TIGR01364       149 -ELPDVKNAPLVADMSSNILSRPIDVS--KFG--LIYAGAQKNIGPAG--LTVVIVR---KDLLGRASRITPSMLNYKIH  218 (349)
T ss_pred             -eecccCCCeEEEEccccccCccCCHH--Hcc--EEEEecccccCCCc--eEEEEEC---HHHHhhcccCCCCcchHHHH
Confidence             5566789999999999 665333322  233  88899999999777  6888888   6666544221          


Q ss_pred             h--ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccc-c-C--CccEEEEeeCCCCCCC
Q 015890          259 Q--DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVK-G-G--EGAIYLWARLPEKHLD  330 (398)
Q Consensus       259 ~--~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~  330 (398)
                      .  ...++|+|.....++.++|+... . .++++.++.+++.+++++.|++++++... . +  .....+.+.++... .
T Consensus       219 ~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~-~  297 (349)
T TIGR01364       219 AENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE-L  297 (349)
T ss_pred             HhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh-H
Confidence            1  22346888899999888888633 3 47889999999999999999998642222 1 1  21244555655321 1


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      ..++...+ .++|+++.++..  ..+.+|+|+.. .+.+|++.++++|+++++
T Consensus       298 ~~~~~~~~-~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~  347 (349)
T TIGR01364       298 EKRFLKEA-EERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQK  347 (349)
T ss_pred             hHHHHHHH-HHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence            24554544 589997777654  34789999888 889999999999998664

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.91  E-value=1.3e-21  Score=183.74  Aligned_cols=286  Identities=22%  Similarity=0.216  Sum_probs=189.2

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----cCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~  142 (398)
                      .+...++++.++++.    +  .+..++++++++|+..++.+++++||+|+++.+.|.+....+..    .|+++..+ +
T Consensus        57 ~pt~~~Le~~lA~l~----g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~-d  129 (425)
T PRK06084         57 NPTNDVLEQRVAALE----G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA-A  129 (425)
T ss_pred             CchHHHHHHHHHHHh----C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE-C
Confidence            344456666666664    4  23566788888999999999999999999999999865544432    46666655 3


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .      .|++.+++.+++++  ++|++++|+||||.+++   +++|.++|+++|+++|+|++| .+....+   ...+.
T Consensus       130 ~------~d~e~le~ai~~~t--klV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~p---~~~ga  195 (425)
T PRK06084        130 H------DDIAALEALIDERT--KAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCRP---FEHGA  195 (425)
T ss_pred             C------CCHHHHHHHhccCC--cEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCCh---hhcCC
Confidence            2      38899999998765  99999999999999999   899999999999999999999 4443221   12345


Q ss_pred             EEEEcccccccCCCcceeEEEEccC-Cc--HHHH-----------------------------HHHHHhhccCCCCcchH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPS-EV--EGFA-----------------------------TQLLKVQDNIPICASII  269 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~-~~--~~~~-----------------------------~~l~~~~~~~~~~~~~~  269 (398)
                      ++++.|++|.++.+|.++|.+++.+ ..  ....                             .............+++.
T Consensus       196 Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~  275 (425)
T PRK06084        196 DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPF  275 (425)
T ss_pred             CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHH
Confidence            5889999999987888888765532 10  0100                             00011122334555666


Q ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCCh
Q 015890          270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDD  331 (398)
Q Consensus       270 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~  331 (398)
                      ..+.+...|+.    +..+.++.+++...+.+.|++++.+. +..|                . .+..+.+++..    +
T Consensus       276 ~a~l~lrgl~t----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~----~  347 (425)
T PRK06084        276 NAFLILQGLET----LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG----G  347 (425)
T ss_pred             HHHHHHcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC----C
Confidence            55555555554    67777888888888999998877532 2221                1 13445556642    1


Q ss_pred             HHHHHHHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+...+++++-.+...   -|...                      + .++.||||++-   |+.+.+++.|.+++.+.
T Consensus       348 ~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---Ed~~dLi~dl~~Al~~~  423 (425)
T PRK06084        348 QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI---EHIDDIIADLAQALDAS  423 (425)
T ss_pred             HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence            2223334433333321   11110                      0 13689999997   67778888888888753

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.91  E-value=2.7e-21  Score=195.60  Aligned_cols=347  Identities=15%  Similarity=0.066  Sum_probs=221.5

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVN  104 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~  104 (398)
                      ++++.|+.+.....++..+.+++.+.+.+..   ...|.......+..+..++.+.++++++++  .|++|+|+|++++.
T Consensus        33 ~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnl  112 (805)
T PLN02724         33 KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKL  112 (805)
T ss_pred             CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHH
Confidence            4478888876665445566666655543211   111222222233444444555555587654  58999999999999


Q ss_pred             HHHHh-ccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCC-------CCCCCCh--HHHHHhhc--------cCC
Q 015890          105 IVLTL-CDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSS-------KTLHPDA--DWLEKTLE--------TKP  163 (398)
Q Consensus       105 ~~~~l-~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~-------~~~~~d~--e~l~~~l~--------~~~  163 (398)
                      ++.++ .++||+|++..-.|.+..   ..++..|+++..+ +.+.       ....+++  +.+++.++        ..+
T Consensus       113 va~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~  191 (805)
T PLN02724        113 VGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV-DIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGE  191 (805)
T ss_pred             HHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec-cchhccccccccccccccchhhhhhhhhhhhccccccCC
Confidence            99988 578999999887876544   3345568888888 6551       1112332  56666532        012


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCc
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-----GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMG  236 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-----~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G  236 (398)
                      .+++|.+.+.+|.||.++|.+.+..+.+.++.+     ++++++|.++ .++......  ..+.++++.|.+|++| +.|
T Consensus       192 ~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~--~~~~Dfl~~S~HK~~GgP~G  269 (805)
T PLN02724        192 AYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLS--RYPADFVVVSFYKIFGYPTG  269 (805)
T ss_pred             CcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChh--hcCCCEEEEecceeccCCCC
Confidence            248999999999999999954433333322222     3689999999 666443332  2344588999999997 444


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhc------------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHH
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQD------------------------NIPICASIISQHLALYSLQTGPE-WVTERVKD  291 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~  291 (398)
                        +|+++++   +++.+.+.....                        ....+.|.+...++.++++.... .+++..++
T Consensus       270 --~G~L~vr---~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~  344 (805)
T PLN02724        270 --LGALLVR---RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMH  344 (805)
T ss_pred             --ceEEEEe---hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHH
Confidence              6888888   555554432211                        11235677777777777765222 25667778


Q ss_pred             HHHHHHHHHHHhccCC------CCccccCC--------ccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCCC-
Q 015890          292 LVRNREIIREALSPLG------EGAVKGGE--------GAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC-  354 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~------~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~-  354 (398)
                      ...+.+++.+.|++++      .++++++.        .+..+.+.+....  .-....+.+++.++||.++.|..|.. 
T Consensus       345 ~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~  424 (805)
T PLN02724        345 TWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPG  424 (805)
T ss_pred             HHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCch
Confidence            8888899999888765      35566532        1233433443211  01123355677789999999988741 


Q ss_pred             ----------------------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          355 ----------------------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       355 ----------------------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                                                        .+.+|+|++. .+.+|++++++.|++.+...
T Consensus       425 ~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~  489 (805)
T PLN02724        425 ACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST  489 (805)
T ss_pred             HHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence                                              2779999999 89999999999999977443

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.91  E-value=5.4e-21  Score=180.75  Aligned_cols=342  Identities=14%  Similarity=0.073  Sum_probs=216.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  ........+....+++.+.+..+...+.+.+++++++|++
T Consensus        43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e  120 (442)
T PRK13360         43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVD  120 (442)
T ss_pred             CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4689999998764  3333 589999999999875211  1111112344556666665554323458999999999999


Q ss_pred             HHHHHhcc-------C-CCEEEEeCCCCcChhhHHHh-cC------------cEEEEeccCCC--C--CCCC--------
Q 015890          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCSS--K--TLHP--------  150 (398)
Q Consensus       104 ~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~--~--~~~~--------  150 (398)
                      .+++....       + ..+|+....+|++....+-. .|            ..+..+ |...  .  .+..        
T Consensus       121 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  199 (442)
T PRK13360        121 TALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHL-PHTLDLARNAFSKGQPEHGAE  199 (442)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEe-CCCchhhccccCCChHHHHHH
Confidence            99987541       2 25899999999987543211 11            011222 2111  0  0111        


Q ss_pred             ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      .++.+++.+..  ...+.+|+++..+...|.+ .+++.+++|.++|++||+++|+||++  ++..|........+....+
T Consensus       200 ~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi  279 (442)
T PRK13360        200 LADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDL  279 (442)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCce
Confidence            14577777751  2336788888777777886 57788999999999999999999999  6555544322222222223


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      .+++|.++ .| +++|.++++   +++.+.+...       ....+++.++...+++.+.|+...+  +...++.+++.+
T Consensus       280 vt~gK~l~-gG~~P~gav~~~---~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~  353 (442)
T PRK13360        280 LTCAKGLT-NGAIPMGAVFVS---SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLAP  353 (442)
T ss_pred             eeeeeccc-cCccceEEEEEc---HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence            48899997 56 789999988   7777766431       2335677888888888888875221  123334444444


Q ss_pred             HHHHHhcc---CCCCccccCCccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          298 IIREALSP---LGEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       298 ~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      ++.+.|++   .+.+.-+... |.+..+.+...    .....++...++ ++||++.+.     .+.+||++.. .++++
T Consensus       354 ~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lr~~Ppl~~t~~e  426 (442)
T PRK13360        354 YWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCF-EKGLMIRYT-----GDILALSPPLIIEEAQ  426 (442)
T ss_pred             HHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCccCHHH
Confidence            44444443   3322222333 44444444211    112345666665 789999763     3579999777 79999


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLEEL  384 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~  384 (398)
                      +++++++|.++++++
T Consensus       427 id~~~~~l~~~l~~~  441 (442)
T PRK13360        427 IDELFDILAQALKET  441 (442)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999764

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.91  E-value=3.6e-21  Score=182.11  Aligned_cols=339  Identities=14%  Similarity=0.102  Sum_probs=215.7

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|..  .++ .+|++.+++.+++.+...  +.......+....+++.+....+.. .+.+++++++++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~  128 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESN  128 (441)
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence            46888999988743  333 589999999999876321  1111112344566777766554322 36899999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCC-C--CC-C--------ChHH
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSK-T--LH-P--------DADW  154 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~--~~-~--------d~e~  154 (398)
                      +.+++...  ....+|+....+|+++...+-.. +.             .+..+ +.+.. .  +. -        .++.
T Consensus       129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  207 (441)
T PRK05769        129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHV-PYPNPYRNPWGIENPEECGNAVLDF  207 (441)
T ss_pred             HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEe-CCCccccccccCCchHHHHHHHHHH
Confidence            99998754  23368999999999977543222 11             11222 21110 0  00 0        1234


Q ss_pred             HHH-hhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEE
Q 015890          155 LEK-TLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNL  225 (398)
Q Consensus       155 l~~-~l~---~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~  225 (398)
                      +++ .++   ....+++|+++..+...|.+ .+++++++|.++|++||+++|+||++  ++..|........+  .+++ 
T Consensus       208 le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv-  286 (441)
T PRK05769        208 IEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII-  286 (441)
T ss_pred             HHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE-
Confidence            555 332   12347888888777777885 56788999999999999999999999  65555332211111  1233 


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc-
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS-  304 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-  304 (398)
                       +++|.++ .|+++|+++++   +++.+.. ......+++.++..++++.+.|+...+   +..++.+++.+++++.|+ 
T Consensus       287 -t~~K~l~-~G~p~gav~~~---~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~  357 (441)
T PRK05769        287 -TLAKAIA-GGLPLGAVIGR---AELMFLP-PGSHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKE  357 (441)
T ss_pred             -EEccccc-CCcccEEEEEe---hhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence             5789998 78999999988   5665432 222344666788899888888875222   334445555555555443 


Q ss_pred             ---cCCCCccccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHH
Q 015890          305 ---PLGEGAVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD  375 (398)
Q Consensus       305 ---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~  375 (398)
                         +++.+.-.... |.++.+.+.....     ....+...++ ++||++.+.    ..+.+|+++.. .+++|++++++
T Consensus       358 l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~----~~~~lr~~p~l~~t~~~id~~~~  431 (441)
T PRK05769        358 LKEKYEFIGDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGA----GKSAIRIIPPLIITEEEADIGLE  431 (441)
T ss_pred             HHHhCCCeeeeecc-eEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecC----CCCEEEEeCCCCCCHHHHHHHHH
Confidence               34443333344 5666666632110     1234555554 799999763    24689999887 79999999999


Q ss_pred             HHHHHHHHH
Q 015890          376 RLRRGLEEL  384 (398)
Q Consensus       376 ~l~~~~~~~  384 (398)
                      ++.+++.++
T Consensus       432 ~l~~~l~~~  440 (441)
T PRK05769        432 ILEEAIKEL  440 (441)
T ss_pred             HHHHHHHHh
Confidence            999998764

>PRK02769 histidine decarboxylase; Provisional

Probab=99.91  E-value=7.5e-21  Score=175.71  Aligned_cols=289  Identities=10%  Similarity=0.043  Sum_probs=209.5

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCCcE--EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  144 (398)
                      ...++.+.+.+++.+.++.+++++  ++|+|+|+++..++....  .+++.|+++...|++....++.+|.+...+ +.+
T Consensus        62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V-~~~  140 (380)
T PRK02769         62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVI-TSL  140 (380)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCcee-ccC
Confidence            356788888888888889876654  889999999987766543  467899999999999999999999888878 766


Q ss_pred             CCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC---CEEEEeece-e---ccCCC--cc
Q 015890          145 SKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG---SWLVVDNTY-F---MYDGR--KH  214 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~---~~livDe~~-~---~~~~~--~~  214 (398)
                      ++ +.+|++.|++.+++. ..+.+|+++.++|+||.+.|   +++|+++|+++|   +++++|.++ .   ++...  +.
T Consensus       141 ~~-g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~  216 (380)
T PRK02769        141 PN-GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF  216 (380)
T ss_pred             CC-CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence            54 468999999999864 12588999999999999999   999999999998   699999999 2   22111  11


Q ss_pred             ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCCCcchHHHHHHHHHhcC-CchHHH
Q 015890          215 CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPICASIISQHLALYSLQT-GPEWVT  286 (398)
Q Consensus       215 ~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~-~~~~~~  286 (398)
                      ... .+.+.++.|.||+++ ....+|.++.+   ++..+.+....       .....+.+.....++.++|+. +...++
T Consensus       217 d~~-~~vDsis~s~HK~~~-~P~g~G~l~~r---~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~  291 (380)
T PRK02769        217 SFA-DGIDSIAISGHKFIG-SPMPCGIVLAK---KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLR  291 (380)
T ss_pred             Ccc-CCCCEEEECCcccCC-CCCCcEEEEEe---hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHH
Confidence            111 234577889999986 34558998888   44544442111       112234455556666666665 456678


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       287 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +..++..++.+++.+.|++.+. .+...+..+.+.++.+.     .+    +.  +|..+.+.     .+.+|+++.. .
T Consensus       292 ~~~~~~~~la~~l~~~L~~~g~-~~~~~p~~~~v~f~~~~-----~~----~~--~~w~l~~~-----~~~~hi~~~~~~  354 (380)
T PRK02769        292 QRVQHCLDMAQYAVDRLQANGI-PAWRNPNSITVVFPCPS-----ER----IW--KKWHLATS-----GNQAHIITMPHH  354 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCC-EEEcCCCceEEEEcCCC-----HH----HH--hCeeEccc-----CCEEEEEECCCC
Confidence            8899999999999999988766 44444447767665442     12    22  45555542     3589999887 6


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015890          366 VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+.++++++.|.+.+...
T Consensus       355 ~~~~~~~f~~dl~~~~~~~  373 (380)
T PRK02769        355 NKQQIDSLIDELIFDLKNP  373 (380)
T ss_pred             CHHHHHHHHHHHHHHHhcc
Confidence            8888999999988877644

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.90  E-value=3e-21  Score=183.40  Aligned_cols=345  Identities=11%  Similarity=0.069  Sum_probs=219.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  ........+.+..+++.+.+..+...+.+++++++++|++
T Consensus        53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  130 (460)
T PRK06916         53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVE  130 (460)
T ss_pred             CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4588999998764  2332 589999999999876211  1111112344556666666555433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-----CCCC------CC
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-----KTLH------PD  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-----~~~~------~d  151 (398)
                      .+++....       +| .+|+....+|++....+-..+.             .+..+ |.+.     .+..      -+
T Consensus       131 ~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~-p~p~~~~~~~~~~~~~~~~~~  209 (460)
T PRK06916        131 IAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKM-PYPYTYRSPYGNDKAEIVKKH  209 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence            99997652       33 6899999999996644332211             11112 1110     0000      13


Q ss_pred             hHHHHHhhc-cCCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~-~~~~~~~v~i~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.++ ....+++|+++. .+...|.+ ++++.++++.++|+++|+++|+||++  ++..|........+....+.
T Consensus       210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv  289 (460)
T PRK06916        210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM  289 (460)
T ss_pred             HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee
Confidence            556677775 223478899886 47777875 68889999999999999999999999  65555433222222222234


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  296 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  296 (398)
                      +++|.++ .| +++|.++++   +++.+.+..       .....+++.++...+++.+.|+..  .+.+++..+.-...+
T Consensus       290 ~~gK~l~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~  365 (460)
T PRK06916        290 TAGKGLT-GGYLPIAITVTT---DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVA  365 (460)
T ss_pred             eeehhhh-cCccccceeeec---HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            7799997 78 599999999   777776542       223446777899988888888752  123333333333333


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +.+.+. .+.+.+.-+... |.++.+.+.+...       +   ...++..++ ++||++.+.     .+.+|+.++. .
T Consensus       366 ~~l~~l-~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~l~~~Ppl~i  437 (460)
T PRK06916        366 TQLEDL-FALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL-----GNTIVFMPPLAS  437 (460)
T ss_pred             HHHHHh-hcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccc
Confidence            444332 234433334445 5555555532110       0   134556554 899999874     2578998666 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++|+++++++|.++++++..
T Consensus       438 t~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06916        438 TIDELDEMLRILYKAISDVTE  458 (460)
T ss_pred             CHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999987654

>PRK05939 hypothetical protein; Provisional

Probab=99.90  E-value=5.7e-21  Score=178.09  Aligned_cols=278  Identities=21%  Similarity=0.169  Sum_probs=184.6

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTL  148 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~  148 (398)
                      .+++.++++.    +.  +..++++++++|+..++.+++++||+|+++.+.|++..   ..++..|++++.+ +.     
T Consensus        51 ~lE~~la~le----g~--~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v-~~-----  118 (397)
T PRK05939         51 ALEAKITKME----GG--VGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV-DA-----  118 (397)
T ss_pred             HHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE-CC-----
Confidence            5666666554    43  23455666789999999999999999999999997643   3466789999888 54     


Q ss_pred             CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcc
Q 015890          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s  227 (398)
                       .|++++++.+++++  ++|++++|+||||.+.+   +++|+++|+++|+++|+|++| .+..   ......+.++++.|
T Consensus       119 -~d~e~l~~~l~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~~---~~~~~~gaDivv~S  189 (397)
T PRK05939        119 -TDVQNVAAAIRPNT--RMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPWL---FRPKDVGASLVINS  189 (397)
T ss_pred             -CCHHHHHHhCCCCC--eEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcccccc---cCccccCCEEEEec
Confidence             27899999998765  99999999999999977   999999999999999999998 3321   11222346799999


Q ss_pred             cccccCCCcceeEEEEccCCcHH------H-------------HHHHHH-hhccCCCCcchHHHHHHHHHhcCCchHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEG------F-------------ATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTE  287 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~------~-------------~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  287 (398)
                      ++|.++..|.++|+++..+....      +             +..+.. ........+++...+.+...++.    +..
T Consensus       190 ~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t----l~~  265 (397)
T PRK05939        190 LSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET----LAL  265 (397)
T ss_pred             CeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc----HHH
Confidence            99999878999999776421000      1             111111 11122344555555444444443    667


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---e
Q 015890          288 RVKDLVRNREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---I  347 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~  347 (398)
                      +.+++.+++..+.+.|+++|.+. |..|                ..|..+.+++..    .. ...++++.-.+..   .
T Consensus       266 R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~----~~-~~~~f~~~l~l~~~~~s  340 (397)
T PRK05939        266 RVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD----GI-DCFDFLNRLKLVIKATH  340 (397)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC----HH-HHHHHHHhCCcceEccC
Confidence            77777788899999999877532 2221                124455666652    11 2223443334321   1


Q ss_pred             cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          348 PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       348 ~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      -|...                      + .++.||+|++-   |+.+.+++.|.+++.
T Consensus       341 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~  395 (397)
T PRK05939        341 LGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALD  395 (397)
T ss_pred             CCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHh
Confidence            11100                      0 13579999997   677788888888875

>PRK07480 putative aminotransferase; Validated

Probab=99.90  E-value=4e-21  Score=182.16  Aligned_cols=346  Identities=13%  Similarity=0.061  Sum_probs=221.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.... ........+.+..+++.+....+...+.+++++++++|++
T Consensus        47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  125 (456)
T PRK07480         47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYY-NTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND  125 (456)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            4688999998764  3333 5899999999998763211 0011122345566666666555433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcC-cE------------EEEeccCCC-CC--CCCC--------
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG-VT------------HILVGPCSS-KT--LHPD--------  151 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g-~~------------~~~~~~~~~-~~--~~~d--------  151 (398)
                      .+++....       +| .+|+....+|++........+ ..            +..+ +.+. ..  +..+        
T Consensus       126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  204 (456)
T PRK07480        126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHI-DQPYWFGEGGDMTPEEFGLAA  204 (456)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeec-CCCcccccccCCChHHHHHHH
Confidence            99987642       33 478999999988654322221 10            1111 1100 00  0001        


Q ss_pred             hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ++.+++.+.  ....+++|+++..+...|.+ .|++.++++.++|++||+++|+||++  |+..|........+....+.
T Consensus       205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv  284 (456)
T PRK07480        205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLM  284 (456)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCee
Confidence            256665553  22347889998777777875 67778999999999999999999999  66556433222222223345


Q ss_pred             ccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCCCcchHHHHHHHHHhcCCc--hHHHHH-HHHHHHHHHH
Q 015890          227 SFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGP--EWVTER-VKDLVRNREI  298 (398)
Q Consensus       227 s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~  298 (398)
                      +++|.++ .|+ ++|.++++   +++.+.+..    .....+++.++.+.+++.+.|+..+  +.+.+. .+.-...++.
T Consensus       285 ~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~  360 (456)
T PRK07480        285 TIAKGLT-SGYIPMGAVGVG---DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKR  360 (456)
T ss_pred             eeehhhc-cCCccceEEEEc---HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            7799997 674 89999998   778776631    2244578889999999999997522  233333 2334444555


Q ss_pred             HHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890          299 IREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE  367 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~  367 (398)
                      +.+ +.+++.+..+... |.++.+.+.+...      +    ...+...+ .++||.+.+.     .+.+|+++.. .++
T Consensus       361 l~~-l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-----~~~l~~~Ppl~it~  432 (456)
T PRK07480        361 LRE-LADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHC-FANGLIMRAV-----GDRMIISPPLVITH  432 (456)
T ss_pred             HHH-hhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHH-HHCCcEEeec-----CCEEEEECCCCCCH
Confidence            555 4555544444455 5666666632110      1    12344444 4899999762     2579999887 799


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 015890          368 DDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++++|.+++.++.+
T Consensus       433 ~eid~~~~~l~~al~~~~~  451 (456)
T PRK07480        433 AEIDELVEKARKALDATAA  451 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998755

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.90  E-value=4.7e-21  Score=181.91  Aligned_cols=347  Identities=14%  Similarity=0.133  Sum_probs=220.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---CcEEEe-cChH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVT-AGAN   99 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---~~v~~~-~g~t   99 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.....  ......+.+..+++.+....+..-   +.++++ ++++
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS  137 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH--TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT  137 (464)
T ss_pred             CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc--ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence            4588999998764  3333 58999999999986422111  111123444455555554332111   246565 6889


Q ss_pred             HHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc------------EEEEeccCCCC-C--C--------CCChH
Q 015890          100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-T--L--------HPDAD  153 (398)
Q Consensus       100 ~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~--~--------~~d~e  153 (398)
                      +|++.+++...  ....+|+....+|+++...+... |.            .+..+ +.+.. .  +        ..+++
T Consensus       138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFL-PYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEe-CCCccccccccCchhhHHHHHHH
Confidence            99999999764  22368999999999976544331 10            11222 22110 0  0        01256


Q ss_pred             HHHHhhccC----CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          154 WLEKTLETK----PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       154 ~l~~~l~~~----~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      .+++.++..    ..+++|+++..+...|.+ .|++.++++.++|++||+++|.||++  |+..|........+....+-
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv  296 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV  296 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE
Confidence            777777631    237889888767777875 56889999999999999999999999  66555433222222223344


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhc
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      +++|.+| .|+++|.++.+   +++ +.+.......+++.++.+.+++.+.|+...  +..++..+.-.+.++.+.+..+
T Consensus       297 ~~gKglg-gG~PlsAv~~~---~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~  371 (464)
T PRK06938        297 VLSKAIG-GSLPLAVVVYR---EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQR  371 (464)
T ss_pred             Eeecccc-CCCceEEEeeh---hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789998 78999999988   453 444333345677889999999999987522  2333333333444555555445


Q ss_pred             cCCCCccccCCccEEEEeeCCCCCC----------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890          305 PLGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC  370 (398)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~  370 (398)
                      +++.+.-+... |.++.+.+.....          +   ...++..++ ++|+.+.++..  ..+.||+.+.. .+++++
T Consensus       372 ~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~--~~~~l~~~Ppl~it~~ei  447 (464)
T PRK06938        372 DYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR--HGSVVRFLPPLIITAEQI  447 (464)
T ss_pred             hCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCccCHHHH
Confidence            56654445555 6667777632110          0   234555554 89999977421  24689998666 799999


Q ss_pred             HHHHHHHHHHHHHHh
Q 015890          371 KAAADRLRRGLEELV  385 (398)
Q Consensus       371 ~~~~~~l~~~~~~~~  385 (398)
                      +++++++.+++.++.
T Consensus       448 d~~~~~l~~~l~~~~  462 (464)
T PRK06938        448 DEVAEIFAEAVAAAV  462 (464)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998754

>PRK07481 hypothetical protein; Provisional

Probab=99.90  E-value=6.6e-21  Score=180.72  Aligned_cols=346  Identities=14%  Similarity=0.075  Sum_probs=220.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+...... ......+.+..+++.+.+..+ ...+.+++++++++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAv  117 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSV  117 (449)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec-ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHH
Confidence            4689999998763  3343 579999999999876321110 001123455566666665542 1235799999999999


Q ss_pred             HHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-C--CCC-CChHH---
Q 015890          103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-K--TLH-PDADW---  154 (398)
Q Consensus       103 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-~--~~~-~d~e~---  154 (398)
                      +.+++....       +| .+|+....+|++....+...+.             .+..+ +.+. .  .+. .|.+.   
T Consensus       118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~d~~~~~~  196 (449)
T PRK07481        118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHV-ETPWLYRNPFTEQDPEELAR  196 (449)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEe-CCCcccccccCCCCHHHHHH
Confidence            999997642       23 5799999999997653322211             11112 1110 0  011 13333   


Q ss_pred             -----HHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEE
Q 015890          155 -----LEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       155 -----l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~  224 (398)
                           +++.+.  ....+++|+++..+...|.+ .+++.++++.++|++||+++|.||++  |+..|........+....
T Consensus       197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD  276 (449)
T PRK07481        197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD  276 (449)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC
Confidence                 344443  22347899999777777875 57788999999999999999999999  655554322222222222


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHH
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR  294 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~  294 (398)
                      +-+++|.++ .| +++|.++++   +++.+.+...       ....+++.++.+.+++.+.|+...  +.+++..+.-..
T Consensus       277 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~  352 (449)
T PRK07481        277 IMCLAKGIT-SGYVPLGATMVN---ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAY  352 (449)
T ss_pred             EEEEeeccc-CCCcCceEEEEc---HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            446789997 67 589999999   7787776531       234567788999999999887522  233444444444


Q ss_pred             HHHHHHHHhccCCCCccccCCccEEEEeeCCCCC------C----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890          295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------L----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  364 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  364 (398)
                      .++.+.+..++.+.+.-+... |.++.+.+....      .    ....+...+ .++||++.+..     +.+|++...
T Consensus       353 l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~g-----~~i~l~Ppl  425 (449)
T PRK07481        353 LLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVA-RENGVLVRPSG-----TKIILSPPL  425 (449)
T ss_pred             HHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHH-HhCCeEEEecC-----CEEEEECCC
Confidence            455555544445544444455 566666663211      0    123455555 48999998742     358999776


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHh
Q 015890          365 -LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       .+++|+++++++|.++++++.
T Consensus       426 ~it~~eid~~~~~l~~~l~~~~  447 (449)
T PRK07481        426 VIQREDVDRIVDALDAGLSAVP  447 (449)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcc
Confidence             699999999999999998753

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.90  E-value=6e-21  Score=177.24  Aligned_cols=278  Identities=17%  Similarity=0.144  Sum_probs=181.8

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS  145 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~  145 (398)
                      ...+++.++++.    |.  +..+++++++.|+..++ .++++||+|+++.+.|.+..    ..++..|+++..+ +.  
T Consensus        52 ~~~Le~~la~l~----g~--~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v-d~--  121 (380)
T PRK06176         52 RFALEELIADLE----GG--VKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII-DT--  121 (380)
T ss_pred             HHHHHHHHHHHh----CC--CCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc-CC--
Confidence            455555555554    53  23455666678998766 56799999999999997543    3456678888877 43  


Q ss_pred             CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                          .|++.+++.+++++  ++|++++|+||+|.+.+   +++|.++|+++|+++|+|++| ..+...+.   ..+.+++
T Consensus       122 ----~d~e~l~~ai~~~t--~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~p~---~~gaDiv  189 (380)
T PRK06176        122 ----SDLSQIKKAIKPNT--KALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQNPL---LLGADIV  189 (380)
T ss_pred             ----CCHHHHHHhcCcCc--eEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCCcc---ccCCCEE
Confidence                27899999998765  99999999999999999   899999999999999999999 43333222   2234588


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +.|++|.++.+| .-.|+++.++  +++.+++...+.......++...+.+...++    .+..+.+++.++..++.+.|
T Consensus       190 v~S~tK~l~g~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~----tl~~R~~~~~~~a~~la~~L  263 (380)
T PRK06176        190 VHSGTKYLGGHSDVVAGLVTTNN--EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK----TLGLRMEAHQKNALCVAEFL  263 (380)
T ss_pred             EecCceeccCCccceeeEEEecH--HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHH
Confidence            999999997544 4467777764  5677777665554344444444443333332    24555566667777777777


Q ss_pred             ccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----------
Q 015890          304 SPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-----------  352 (398)
Q Consensus       304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-----------  352 (398)
                      ++.+.+ +++.|                ..+..+.+++..     .+.+.+++++-.+.-   .-|...           
T Consensus       264 ~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-----~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~  338 (380)
T PRK06176        264 EKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-----DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH  338 (380)
T ss_pred             HhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-----HHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence            766542 12111                113445566642     123334444444322   111110           


Q ss_pred             -----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                 + .++-||+|++-   |+.+.+++.|.+++++
T Consensus       339 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~  378 (380)
T PRK06176        339 ACIPKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAK  378 (380)
T ss_pred             ccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                       0 13579999996   6777888888888865

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.90  E-value=1.7e-21  Score=181.70  Aligned_cols=324  Identities=13%  Similarity=0.037  Sum_probs=214.7

Q ss_pred             eEEcCCccCCCCCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEec-ChHHHHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTA-GANQAFVNIVLT  108 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~-v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~-g~t~a~~~~~~~  108 (398)
                      .+.|+.|  +..++|. |++++.+.+...    .+.+....++.+...+.++++++.+ +++|++++ |+|.+++.++.+
T Consensus        13 ~~~f~~G--p~~~~~~~v~~a~~~~~~~~----~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~   86 (378)
T PRK03080         13 DPRFSSG--PCKKRPGWQLEALADALLGR----SHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWS   86 (378)
T ss_pred             CCCcCCC--CcCCChHHHHHHHHhhhccc----CcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHh
Confidence            3445555  4556777 999998765321    1223345566666666677777874 45788875 999999999999


Q ss_pred             hccC-CCEEEEeCCCCcC-hhh-HHHhcCc-EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          109 LCDA-GDSVVMFAPYYFN-SYM-SFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       109 l~~~-gd~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      +.++ ++.|+. ...|.. +.. ..+.+|. ++..+ +.+ .+..+|+++++    . +  ++|.+++..|.||..+|  
T Consensus        87 l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~-~~~-~g~~~d~~~i~----~-~--~~V~~~h~~t~tG~~~p--  154 (378)
T PRK03080         87 LLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVL-EAD-YGSLPDLSAVD----F-D--RDVVFTWNGTTTGVRVP--  154 (378)
T ss_pred             cCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEe-ccC-CCCCCCHhhcC----C-C--CCEEEEecCCccceecc--
Confidence            9874 344444 444432 333 2366788 88887 655 34456776633    2 3  67899999999999999  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----  259 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----  259 (398)
                       +++|++  +++|+++++|.++ ++........    .+++++|.+|+++. ...+|+++.+   ++.++++....    
T Consensus       155 -i~~I~~--~~~g~~~vVDa~qs~G~~pidv~~----iD~~~~s~~K~l~~-P~G~g~l~v~---~~~~~~~~p~~~~~~  223 (378)
T PRK03080        155 -VARWIG--ADREGLTICDATSAAFALPLDWSK----LDVYTFSWQKVLGG-EGGHGMAILS---PRAVERLESYTPARP  223 (378)
T ss_pred             -chhhcc--ccCCCeEEEecccccccCCCCHHH----CcEEEEehhhhCCC-CCceEEEEEC---HHHHHhhhcccCCCC
Confidence             788877  7889999999999 6654333222    25889999999953 2347998888   67766654311    


Q ss_pred             -------------------ccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCcccc--C--
Q 015890          260 -------------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKG--G--  314 (398)
Q Consensus       260 -------------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~--  314 (398)
                                         .....+++.....++..+|+...+  .++++.++.+++.+++++.|+++++..+..  +  
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~  303 (378)
T PRK03080        224 IPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPAT  303 (378)
T ss_pred             CchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence                               111234455555555556654222  367778888889999999999887645542  1  


Q ss_pred             CccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          315 EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       315 ~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ..+..+.+.++... ....++..+++ ++||.+..|......+.+|+|++. .+.+|+++++++|++++++..
T Consensus       304 ~s~~i~~~~~~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~  375 (378)
T PRK03080        304 RSNTSVTLDFVDAQAAVDAAAVAKLL-RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK  375 (378)
T ss_pred             cCccEEEEEcCCchHHHHHHHHHHHH-HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            12234555665300 01345666676 568888876543335789999988 899999999999999877643

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.90  E-value=2.7e-21  Score=178.43  Aligned_cols=317  Identities=13%  Similarity=0.092  Sum_probs=222.3

Q ss_pred             CCCCcHHHHHHHHHhhcC---CCCCCCCC---CCCcHHHHHHHHHHHhhhcCCC-CCc-EEEecChHHHHHHHHHHhccC
Q 015890           41 YWQPPKMAMEKVKELVWD---PSISKYGA---DEGLPELRDALVKKLNQENKLY-KSS-VMVTAGANQAFVNIVLTLCDA  112 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~---~~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~-~~~-v~~~~g~t~a~~~~~~~l~~~  112 (398)
                      |...|++|++|+.+.+.+   ...+.+..   +..+.++.+.+.+.++++++.+ ... ++++++++.+++.++.+++.+
T Consensus        11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~   90 (360)
T PRK05355         11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGG   90 (360)
T ss_pred             CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCC
Confidence            666899999999988632   11222222   3333467777777777777863 334 555588899999999999999


Q ss_pred             CCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH-hhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          113 GDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       113 gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~-~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      |+++++...+.++  +.+.++.+|.. ..+ ..+. .+. .+..++++ .++++  +++|.+++..+.||+..+  .+.+
T Consensus        91 g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~-~~~~~~g~-~~~~~~~~~~l~~~--~~~V~~th~eTstGv~~~--~i~~  163 (360)
T PRK05355         91 GKKADYVDTGSWSKKAIKEAKKYGEV-NVA-ASSEDDGF-TYIPPLDEWQLSDD--AAYVHYTSNETIDGTEFH--ELPD  163 (360)
T ss_pred             CCeEEEEECCHHHHHHHHHHHHhCCc-eEE-ecccccCC-CCCCChhhccCCCC--CCEEEEccCCCcceEecC--cccc
Confidence            9999988877765  55778888865 444 3332 343 34444444 67654  599999999999999983  1655


Q ss_pred             HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH-h--------
Q 015890          189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-V--------  258 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~-~--------  258 (398)
                      |      +|+++++|.++ ++.......  ..+  ++++|.+|.+|++|  +|.++++   +++++++.. .        
T Consensus       164 i------~g~l~vVDavss~g~~~idv~--~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~l~~~~~~~~~~~~~~~  228 (360)
T PRK05355        164 T------GDVPLVADMSSDILSRPIDVS--KFG--LIYAGAQKNIGPAG--LTIVIVR---EDLLGRALPSIPSMLDYKT  228 (360)
T ss_pred             c------CCCcEEEEcCccccCccCCHH--Hcc--EEEEeccccccCCc--eEEEEEC---HHHHhhcccCCChHHHHHH
Confidence            5      79999999999 665433332  233  88899999998776  6888888   566655433 1        


Q ss_pred             ---hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEeeCCCCCCC
Q 015890          259 ---QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKHLD  330 (398)
Q Consensus       259 ---~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~  330 (398)
                         ....++++|.....++.++|+... . .++++.++.+++.+++++.|++++......+   .....+.+.++.. ..
T Consensus       229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-~~  307 (360)
T PRK05355        229 HADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE-EL  307 (360)
T ss_pred             HHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh-HH
Confidence               112457888999999998888622 3 4788889999999999999999885332221   2224455666643 12


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..++...+ .++|+.+.++..  ..+.+|+|+.. .+.+|++++++.|+++++.
T Consensus       308 ~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        308 DKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR  358 (360)
T ss_pred             HHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            34555555 478999866542  35789999988 8999999999999987653

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.90  E-value=3.4e-21  Score=176.98  Aligned_cols=323  Identities=11%  Similarity=0.102  Sum_probs=214.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +.+. ...+.+..+++.+.+..+  .+.+++++++++|++
T Consensus        21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~SGseA~e   95 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWVN--YEYVYMGNSGTEAVE   95 (364)
T ss_pred             CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhcC--CCEEEEeCchHHHHH
Confidence            4789999998764  3343 579999999999876321  1111 123344555555554443  357999999999999


Q ss_pred             HHHHHhc-cCC-CEEEEeCCCCcChhhHHHhc-C-------cEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890          104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSFQMT-G-------VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       104 ~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~~~~-g-------~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      .+++... .+| ++|+....+|++....+-.. +       ..+... ......+ .|.+.+++.+.++  +++|+++..
T Consensus        96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~-~~~~~~~-~d~~~l~~~i~~~--~aAvivEpi  171 (364)
T PRK04013         96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVP-GFKHIPF-NDVEAAKEAITKE--TAAVIFEPI  171 (364)
T ss_pred             HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCC-CcEEecC-CCHHHHHHHhcCC--cEEEEEcCC
Confidence            9999874 344 79999999999876443321 1       111000 0111111 2678889888754  589999877


Q ss_pred             CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          174 GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       174 ~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      +...|.. .|++.++++.++|++||+++|.||++  + ..|........+....+-+++|.+| .|+++|.++.+.   +
T Consensus       172 ~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lg-gG~P~~a~~~~~---~  246 (364)
T PRK04013        172 QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIG-NGVPVSLTLTNF---D  246 (364)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEeccccc-CCceeEEEEecc---c
Confidence            7777774 57789999999999999999999999  5 5554322221222222446789998 789999998883   3


Q ss_pred             HHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC
Q 015890          251 FATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH  328 (398)
Q Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  328 (398)
                      +    .......+++.++.+.+++.+.|+..+  +..++..+       .+. .+.. +.+.-+... |.++-+.+.+  
T Consensus       247 ~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~-------~l~-~l~~-~~v~~vRG~-Gl~~gve~~~--  310 (364)
T PRK04013        247 V----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGE-------KFI-EIKG-ERVVTTRGR-GLMIGIVLKK--  310 (364)
T ss_pred             c----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHH-------HHH-Hhcc-CcceeeeeC-cEEEEEEeCC--
Confidence            3    122345678889999999999887522  22222221       122 2222 333334455 7777788853  


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       ....+...++ ++|+.+.+.    ..+.+|+.+.. .+++++++++++|.++++++.
T Consensus       311 -~~~~i~~~~~-~~Gll~~~~----g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        311 -PVGKYVEELQ-NRGYLVHTA----GQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL  362 (364)
T ss_pred             -cHHHHHHHHH-hCCcEEeeC----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence             2445666664 899999764    24789999887 799999999999999998754

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.90  E-value=7.9e-21  Score=178.59  Aligned_cols=338  Identities=13%  Similarity=0.058  Sum_probs=214.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.....+.  ....+....+++.+.+..+...+.+++++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  114 (422)
T PRK05630         37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG--GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVE  114 (422)
T ss_pred             CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC--CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence            4689999998764  3333 5899999999998763211111  111234455666665544333468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCCCC-CCCC-C----hHHH
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSK-TLHP-D----ADWL  155 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~-~~~~-d----~e~l  155 (398)
                      .+++....       ++ .+|+....+|++....+-.. +.             ....+ |.+.. +... +    .+.+
T Consensus       115 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~  193 (422)
T PRK05630        115 VAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFA-PAPPVRGSSPQEISEYLRSL  193 (422)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEc-CCCcccCCChHHHHHHHHHH
Confidence            99997542       23 57999999999865433221 10             11222 22111 1000 1    2344


Q ss_pred             HHhhccCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890          156 EKTLETKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~  231 (398)
                      ++.+.+  .+.+|+++.. +...|.. .+++.++++.++|++||+++|+||++  ++..|........+....+.+++|.
T Consensus       194 ~~~~~~--~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~  271 (422)
T PRK05630        194 ELLIDE--TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKA  271 (422)
T ss_pred             HHHHhh--ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeech
Confidence            555543  3688998863 7777874 57789999999999999999999999  5555543222212222223378999


Q ss_pred             cCCCc-ceeEEEEccCCcHHHHHHHHHh------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890          232 YGMMG-WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       232 ~~~~G-~r~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      ++ .| ..+|+++++   +++.+.+...      ....+++.++...+++.++|+...+  +...++..++.+++.+.|+
T Consensus       272 l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~L~  345 (422)
T PRK05630        272 LT-GGFMSFAATLCT---DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAGLS  345 (422)
T ss_pred             hh-cCccccceeecc---HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHH
Confidence            96 67 479999999   7777766421      2345778889999988888875221  1122233344444444333


Q ss_pred             ---cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          305 ---PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       305 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                         +.+.+.-+... |.++.+.+.... +...+...++ ++|+++.+.     .+.+|+.+.. .+++++++++++|.++
T Consensus       346 ~l~~~~~v~~vRg~-Gl~~~ie~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~~a  417 (422)
T PRK05630        346 PLAHLPGVADVRVL-GAIGVVEMEQPV-DMEEATQAAV-DHGVWLRPF-----GRLVYVMPPYITTSEQIAQICAALAAA  417 (422)
T ss_pred             HhhcCCCeeeeecc-ccEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCccCCHHHHHHHHHHHHHH
Confidence               33332323344 677777775321 3456666654 899999763     2689999877 7999999999999999


Q ss_pred             HHH
Q 015890          381 LEE  383 (398)
Q Consensus       381 ~~~  383 (398)
                      +++
T Consensus       418 l~~  420 (422)
T PRK05630        418 VKA  420 (422)
T ss_pred             Hhc
Confidence            865

>PRK07046 aminotransferase; Validated

Probab=99.90  E-value=2e-20  Score=177.12  Aligned_cols=335  Identities=13%  Similarity=0.064  Sum_probs=219.5

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|..  .++ .+|.+.+++.+++.+.....+ +    .+....+++.+.+..+  .+.+.+++++|+|+.
T Consensus        72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~-~----~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e  144 (453)
T PRK07046         72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML-P----SEDAAWVGEELARRFG--LPYWQVATTATDANR  144 (453)
T ss_pred             CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHHhC--CCEEEEECCHHHHHH
Confidence            35788999976642  233 579999999999987433222 2    3445556666665544  568999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHH-h-cCcEE----------EEe-ccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-M-TGVTH----------ILV-GPCSSKTLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~-~g~~~----------~~~-~~~~~~~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      .+++...  ...++|+....+|+++....- . .+...          ..+ .+.....+ -|++.+++.+..+ .+++|
T Consensus       145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~-~vAav  222 (453)
T PRK07046        145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADG-DVAAV  222 (453)
T ss_pred             HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCC-CeEEE
Confidence            9999864  233789999999999853221 1 00000          000 00000011 2789999988643 37888


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      +++..+...|.+ .+++.++++.++|++||+++|+||++ |  ++.+...   ..+....+.+++|.+| .|+++|.+++
T Consensus       223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~---~~gv~PDi~t~gK~lg-gG~Pi~av~g  298 (453)
T PRK07046        223 LAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTR---AHGLEPDFLVVGKPIA-GGVPCAVYGF  298 (453)
T ss_pred             EECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhH---HhCCCccceeehhhhc-CCCcceeeee
Confidence            888666666765 56678999999999999999999999 3  3333211   1122233447899998 7899999999


Q ss_pred             cCCcHHHHHHHHHh---------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          245 PSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       245 ~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      +   +++.+.+...         ....+++.++...+++.+.|+.  ..+.+++..+...+.++.+.+.+++.+....+.
T Consensus       299 ~---~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~  375 (453)
T PRK07046        299 S---AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVT  375 (453)
T ss_pred             h---HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            8   7888777531         1234677889999999998874  224455555555666667776666666533343


Q ss_pred             CCccEEEEeeCCC-CCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPE-KHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       314 ~~~~~~~~~~~~~-~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ..+.. +.+.+.. ...         +   ...++..++ ++||++.+.     .+.++++.. .+++|++++++++.++
T Consensus       376 g~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~~~~~p~-~t~~did~~~~~~~~~  447 (453)
T PRK07046        376 RVGAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRGVLITPF-----HNMMLVCPA-TTAADVDRLVAAFDAC  447 (453)
T ss_pred             EeCcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCCCEEecc-----cCcEEEeCC-CCHHHHHHHHHHHHHH
Confidence            44333 3333311 110         1   123445554 789999763     246788877 5999999999999999


Q ss_pred             HHHHh
Q 015890          381 LEELV  385 (398)
Q Consensus       381 ~~~~~  385 (398)
                      ++++.
T Consensus       448 l~~~~  452 (453)
T PRK07046        448 LGELL  452 (453)
T ss_pred             HHHHh
Confidence            98764

>PLN02271 serine hydroxymethyltransferase

Probab=99.90  E-value=1.8e-20  Score=175.09  Aligned_cols=356  Identities=14%  Similarity=0.065  Sum_probs=243.1

Q ss_pred             hccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhc
Q 015890           12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus        12 ~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~   85 (398)
                      ...+...+.-+.+.....++-++|--..|.  .++.+++++...+.+.-.-+|      +-.....+++....+..++.+
T Consensus       130 ~~~Dpei~~li~~E~~rQ~~~l~LIASEN~--~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF  207 (586)
T PLN02271        130 PEADPDIHELMEKEKQRQFKGIELIASENF--VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAF  207 (586)
T ss_pred             hhhCHHHHHHHHHHHHHHhcCeeecccccc--CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHh
Confidence            344555555566655556788888877666  479999988777755222222      223444566666667777778


Q ss_pred             CCCC----CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH---------HhcC--cEEEEeccCCCCCCCC
Q 015890           86 KLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---------QMTG--VTHILVGPCSSKTLHP  150 (398)
Q Consensus        86 ~~~~----~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---------~~~g--~~~~~~~~~~~~~~~~  150 (398)
                      +.+.    -||... |++.|+.+++.++++|||+|+..+..|.++....         ...|  ++.+++ +.+++...+
T Consensus       208 ~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY-~~d~~~g~I  285 (586)
T PLN02271        208 GLDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPY-KVNPQTGYI  285 (586)
T ss_pred             CCcccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEc-ccccccCcc
Confidence            8765    566666 5669999999999999999999888887655422         3345  355555 676666679


Q ss_pred             ChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEc
Q 015890          151 DADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLF  226 (398)
Q Consensus       151 d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~  226 (398)
                      |.|++++... .+  ||+|++....+|  ..+|   ++++.++|+++|+++++|.+| .+.-  +....+..+ .+++++
T Consensus       286 Dyd~lek~a~~~r--PKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-aDvvt~  357 (586)
T PLN02271        286 DYDKLEEKALDFR--PKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-CDIVTS  357 (586)
T ss_pred             CHHHHHHHhhhcC--CeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-CcEEEe
Confidence            9999999554 44  599999877777  6677   889999999999999999999 4432  222222222 458899


Q ss_pred             ccccccCCCcceeEEEEccCCc-----------------HHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHH
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEV-----------------EGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTE  287 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~-----------------~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~  287 (398)
                      |.+|++  .|.|.|.+..+++.                 +++.+++.... .....++....+++.+.++.. ....+.+
T Consensus       358 TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~  435 (586)
T PLN02271        358 TTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKA  435 (586)
T ss_pred             CCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHH
Confidence            999998  46667888876421                 13455554332 222333344445565666654 2344589


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEe
Q 015890          288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISF  362 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~  362 (398)
                      +.+++.++++.|.+.|.+.|...+.+......+++++.....+. ..++++|++.||.+.--..++     .++.|||+.
T Consensus       436 Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G-~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT  514 (586)
T PLN02271        436 YMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTG-KNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGT  514 (586)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCH-HHHHHHHHHcCeEeccccCCCCCCCCCCCcccccC
Confidence            99999999999999999888844555555677888886544344 455556688999995443322     357899984


Q ss_pred             cC-----CCHHHHHHHHHHHHHHHH
Q 015890          363 GG-----LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       363 ~~-----~~~~~~~~~~~~l~~~~~  382 (398)
                      ..     ..++|+++..+.|.++++
T Consensus       515 ~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        515 PAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             HHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            33     466888988888888876

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.90  E-value=1.5e-20  Score=159.14  Aligned_cols=323  Identities=14%  Similarity=0.103  Sum_probs=237.4

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCC
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP  121 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p  121 (398)
                      ..++.+.+|+...     ..+| .++....+.+.+.+-++..+... ..-+++..+++.+++.++..++.|||+|++...
T Consensus        27 nl~~~V~~A~~~~-----~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~  100 (385)
T KOG2862|consen   27 NLSGRVQEAMSRP-----SLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVST  100 (385)
T ss_pred             CCCHHHHHhhcCC-----cccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEe
Confidence            3466666666443     2334 45555666666666666666543 456888888999999999999999999999877


Q ss_pred             CCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890          122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (398)
Q Consensus       122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (398)
                      +-++  +.+.++.+|+++..+ +.+. |....+|.+++++..++ +++|++++..+.||+..+.  ++.+.++|++|+++
T Consensus       101 G~wg~ra~D~~~r~ga~V~~v-~~~~-G~~~~le~i~~~lsqh~-p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~l  175 (385)
T KOG2862|consen  101 GTWGQRAADCARRYGAEVDVV-EADI-GQAVPLEEITEKLSQHK-PKAVFVTHGDSSTGVLQDL--LAISGELCHKHEAL  175 (385)
T ss_pred             chHHHHHHHHHHhhCceeeEE-ecCc-ccCccHHHHHHHHHhcC-CceEEEEecCccccccchH--HHHHHHHhhcCCeE
Confidence            7755  567889999999988 6653 45689999999999876 8999999999999999873  56667789999999


Q ss_pred             EEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhh------------------
Q 015890          200 LVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQ------------------  259 (398)
Q Consensus       200 livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~------------------  259 (398)
                      ++||.+. ++  +.++..+.++.++......|++|. +|+  +-+..+   +...++++.-+                  
T Consensus       176 llVD~VaSlg--gt~F~mDewgVDvaytgSQKaL~aP~GL--siisfS---~ka~~~~~~rK~~~~~~yFd~~~~~~~wg  248 (385)
T KOG2862|consen  176 LLVDTVASLG--GTEFEMDEWGVDVAYTGSQKALGAPAGL--SIISFS---DKALEAIRDRKTKPVSFYFDILRLGNFWG  248 (385)
T ss_pred             EEEechhhcC--CccceehhhcccEEEecchhhcCCCCCc--ceeecC---HHHHHHHhhccCCceEEEEeHHhhcchhc
Confidence            9999887 44  344555556666777777899974 443  557777   55555554321                  


Q ss_pred             -----ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc---CCccEEEEeeCCCCCCC
Q 015890          260 -----DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG---GEGAIYLWARLPEKHLD  330 (398)
Q Consensus       260 -----~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~  330 (398)
                           ..+..+++.-....+.++|.. .++.+++..+++++..+.++..|+++|..-+..   ....-.-.+.+|.. .|
T Consensus       249 c~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~g-vD  327 (385)
T KOG2862|consen  249 CDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYG-VD  327 (385)
T ss_pred             cCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCC-CC
Confidence                 134456777778888888875 346789999999999999999999887622221   11122334555554 48


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      -.+++.++...+++.+..|-....+..+||++..  -+.+.+++.++.|+.++++-
T Consensus       328 w~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  328 WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             HHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            8899999987778888777666677899999655  47788999999999888763

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.90  E-value=8.7e-21  Score=179.50  Aligned_cols=342  Identities=14%  Similarity=0.088  Sum_probs=217.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+..  .++......+....+++.+.+..+...+.|++++++++|++
T Consensus        46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve  123 (445)
T PRK09221         46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLD--YAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVD  123 (445)
T ss_pred             CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            4689999998764  3333 58999999999987621  11111112334455666666554433468999999999999


Q ss_pred             HHHHHhcc-------C-CCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC--C--CCCC--------
Q 015890          104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS--K--TLHP--------  150 (398)
Q Consensus       104 ~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~--~~~~--------  150 (398)
                      .+++....       + ..+|+....+|++....+-..+.             .+..+ +.+.  .  .+..        
T Consensus       124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  202 (445)
T PRK09221        124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHL-PHTLDLPENAFSKGQPEHGAE  202 (445)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEe-CCCccccccccCCChHHHHHH
Confidence            99987541       1 25899999999987543221110             11122 1110  0  0000        


Q ss_pred             ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      .++++++.++.  ...+++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|........+....+
T Consensus       203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi  282 (445)
T PRK09221        203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI  282 (445)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE
Confidence            13567777752  1347889998778778885 56778999999999999999999999  6655543322211111124


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      .+++|.++ .| +++|.++++   +++.+.+..       .....+++.++...+++.+.|+...+  +...++.+++.+
T Consensus       283 ~~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~  356 (445)
T PRK09221        283 ITFAKGLT-NGAIPMGAVIAS---DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--EDLFERAAELAP  356 (445)
T ss_pred             EEeccccc-cCcccceeeEEc---HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence            47899997 55 689999888   777776642       12234677788888888888875211  123444555555


Q ss_pred             HHHHHhccC---CCCccccCCccEEEEeeCCCCC----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          298 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       298 ~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      ++++.|+++   +.+.-+... |.+..+.+....    .....+.+.++ ++||.+.++     .+.+|+++.. .++++
T Consensus       357 ~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~lr~~Ppl~~t~~e  429 (445)
T PRK09221        357 YFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCF-EKGLLVRYT-----GDTIALSPPLIIEKAQ  429 (445)
T ss_pred             HHHHHHHhhccCCCEEEEecC-ceEEEEEEecccccccchHHHHHHHHH-HCCeEEeec-----CCEEEEECCccCCHHH
Confidence            555555443   322223334 455555553211    12345666665 889999763     3579999777 79999


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLEEL  384 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~  384 (398)
                      +++++++|.+++.++
T Consensus       430 id~~~~~l~~~l~~~  444 (445)
T PRK09221        430 IDELVDALGDALRAV  444 (445)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999764

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.90  E-value=9.9e-21  Score=179.35  Aligned_cols=338  Identities=17%  Similarity=0.122  Sum_probs=210.3

Q ss_pred             HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|...  ++ .+|++.+++.+++.+...  +..   ..+.+..+++.+.+..+. .+.+.+++++++|+.
T Consensus        96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e  169 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACM  169 (474)
T ss_pred             CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHH
Confidence            357889999876532  33 589999999999987432  221   234556667777665432 478999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc---CcEEE------EeccC--CC----CCCCCChHHHHHhhcc-CCCC
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT---GVTHI------LVGPC--SS----KTLHPDADWLEKTLET-KPTP  165 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~------~~~~~--~~----~~~~~d~e~l~~~l~~-~~~~  165 (398)
                      .+++...  ....+|+....+|+++...+...   +....      .+ +.  ..    ..+ -|++.+++.++. ...+
T Consensus       170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~i  247 (474)
T PLN02482        170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGV-PKAATSATLTAPY-NDLEAVKKLFEANKGEI  247 (474)
T ss_pred             HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCC-CCCCCCCeEEecC-CChHHHHHHHHhCCCce
Confidence            9999764  22368999999999976422110   10000      00 00  00    011 178889988863 2336


Q ss_pred             eEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeeceec-cCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          166 KLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      ++|+++..+...|.+.+ +++++++.++|++||+++|+||++.+ ..+........+....+.+++|.+| .|+++|.++
T Consensus       248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~gK~lg-gG~Pigav~  326 (474)
T PLN02482        248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLGKVIG-GGLPVGAYG  326 (474)
T ss_pred             EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEecchhh-CCCceEEEE
Confidence            78888877777887654 78899999999999999999999922 3332211111111222457899998 889999998


Q ss_pred             ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890          244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  318 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  318 (398)
                      ++   +++++.+...   ....+++.+++..+++.+.|+..  .+.+++..+.....++.|.+...+.+...+.....++
T Consensus       327 g~---~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~  403 (474)
T PLN02482        327 GR---REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGM  403 (474)
T ss_pred             Ec---HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceE
Confidence            88   7888877532   23345667888888888888752  2333444444444455555544444331121222233


Q ss_pred             EEEeeCCCC-C--------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       319 ~~~~~~~~~-~--------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      + .+.+... .        .+   ...+...++ ++||++.+....  .+.  +++. .+++|++++++++.+++.+
T Consensus       404 ~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~--psl~-ht~~dId~~l~al~~~l~~  473 (474)
T PLN02482        404 F-GFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAPSQFE--AGF--TSLA-HTEEDIDFTIAAAERVLAR  473 (474)
T ss_pred             E-EEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEeccCCC--CCc--CCCC-CCHHHHHHHHHHHHHHHHh
Confidence            2 2222110 0        01   124555555 799999874321  111  3444 5899999999999999875

>PRK12403 putative aminotransferase; Provisional

Probab=99.90  E-value=1.8e-20  Score=178.04  Aligned_cols=344  Identities=13%  Similarity=0.061  Sum_probs=217.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+...  +... .+..+....+++.+....+...+.++++++|++|+
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~  128 (460)
T PRK12403         51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEAN  128 (460)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence            4688999987653  2232 579999999999876321  1111 12234455566666555443346899999999999


Q ss_pred             HHHHHHhc-------cCCC-EEEEeCCCCcChhhHH-HhcCcE-----------EEEeccCCC---CCCCC--------C
Q 015890          103 VNIVLTLC-------DAGD-SVVMFAPYYFNSYMSF-QMTGVT-----------HILVGPCSS---KTLHP--------D  151 (398)
Q Consensus       103 ~~~~~~l~-------~~gd-~Vl~~~p~~~~~~~~~-~~~g~~-----------~~~~~~~~~---~~~~~--------d  151 (398)
                      +.+++...       ++++ .|+....+|++..... ...|..           +..+ |.+.   ..+..        +
T Consensus       129 e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  207 (460)
T PRK12403        129 EVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHI-DEPYWYANGGELTPAEFGRRA  207 (460)
T ss_pred             HHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence            99999874       1223 4556677888864332 222211           1222 1110   00000        1


Q ss_pred             hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEE
Q 015890          152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVN  224 (398)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~  224 (398)
                      ++++++.+.  ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|........+  .+++
T Consensus       208 ~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv  287 (460)
T PRK12403        208 ALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL  287 (460)
T ss_pred             HHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE
Confidence            355666553  22336788888777777875 57788999999999999999999999  66666433322111  1233


Q ss_pred             EcccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCCc--hHHHHHH-HHHHHHH
Q 015890          225 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGP--EWVTERV-KDLVRNR  296 (398)
Q Consensus       225 ~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~~~  296 (398)
                        +++|.++ .|+ ++|.++++   +++.+.+...    ....+++.++.+.+++.+.|+..+  +.+++.. +.....+
T Consensus       288 --~~gK~lg-gG~~Piga~v~~---~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~  361 (460)
T PRK12403        288 --SIAKGLT-SGYVPMGGLVLS---KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQ  361 (460)
T ss_pred             --EEccccc-ccccceEEEEEC---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence              5899997 785 89999888   7777766421    133567788999999999887522  2333332 3444455


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +.+.+..++.+.+.-+... |.++.+.+.....     .     ...+...+ .++|+.+.+.     .+.+|++... .
T Consensus       362 ~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-----~~~~~l~Ppl~i  434 (460)
T PRK12403        362 RCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIG-FEEGVIIRST-----LGRMIMAPALVA  434 (460)
T ss_pred             HHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHH-HhCCEEEEec-----CCEEEEECCCCC
Confidence            5566555566654445555 6666666632110     0     11223333 4799999753     2468999887 7


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++++++|.+++.++.+
T Consensus       435 t~~eid~~~~~l~~al~~~~~  455 (460)
T PRK12403        435 GRAEIDELVDKTRIAVDRTAR  455 (460)
T ss_pred             CHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998864

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.90  E-value=2.3e-20  Score=177.15  Aligned_cols=361  Identities=15%  Similarity=0.084  Sum_probs=230.0

Q ss_pred             HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhh
Q 015890           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ   83 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~   83 (398)
                      .+...+...+.-+.+.....++.++|--..|.  .++.+++++...+.+.-..+|+      -.....++++...+...+
T Consensus        14 ~~~~~d~~~~~~i~~e~~~q~~~l~liasen~--~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~   91 (475)
T PLN03226         14 PLEEVDPEIADIIEKEKRRQWKGLELIASENF--TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALE   91 (475)
T ss_pred             hhhhcCHHHHHHHHHHHHHHHcCeeEecCCcc--CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHH
Confidence            35556667777777777666889999888776  4789999988888432122221      123334454444444555


Q ss_pred             hcCCCCCcEEE---ecChHHHHHHHHHHhccCCCEEEEeCC---CCcChhhHH---HhcCc----EEEEeccCCCCCCCC
Q 015890           84 ENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAP---YYFNSYMSF---QMTGV----THILVGPCSSKTLHP  150 (398)
Q Consensus        84 ~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~Vl~~~p---~~~~~~~~~---~~~g~----~~~~~~~~~~~~~~~  150 (398)
                      .++.....+.+   .++|+.|+..++.+++++||+|+..+.   +|..+....   +..+.    +++.+ ..+.++..+
T Consensus        92 ~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y-~~~~~~g~i  170 (475)
T PLN03226         92 AFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY-RLDESTGLI  170 (475)
T ss_pred             HhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee-eecCCCCCc
Confidence            66766655544   367789999999999999999998543   443322211   11111    22233 344455678


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccccCCcEEEEcc
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCVEGDHVVNLFS  227 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~~~~~~i~~~s  227 (398)
                      |+++|++.+.... +++|++. .+ .+|...|   +++|.++|+++|+++++|++| ++.-+...  ... ...+++++|
T Consensus       171 D~d~Le~~l~~~~-pklIv~~-~S-~~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~-~~~Div~~t  243 (475)
T PLN03226        171 DYDKLEKKAMLFR-PKLIIAG-AS-AYPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF-EYCDVVTTT  243 (475)
T ss_pred             CHHHHHHHHhhcC-CeEEEEe-cC-cCCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC-CCCeEEEec
Confidence            9999999997543 5776663 23 3678888   889999999999999999999 44322111  111 235688999


Q ss_pred             cccccCCCcceeEEEEccCCcH-----------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVE-----------GFATQLLKVQ-DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVR  294 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~-----------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~  294 (398)
                      ++|+++  |.+.|++++++...           ++.+.+.... .....+++....+++..+++.. ....+++.+++.+
T Consensus       244 ~hK~L~--GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~  321 (475)
T PLN03226        244 THKSLR--GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKA  321 (475)
T ss_pred             Cccccc--CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence            999993  33348888773110           2222222111 1223445566666666667652 2235677888999


Q ss_pred             HHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEE----ecC
Q 015890          295 NREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRIS----FGG  364 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~----~~~  364 (398)
                      +.+++.+.|.+.|. .+..+ .....+++++.....+..++...| ++.||.+..+..++     .++.||++    ..+
T Consensus       322 na~~L~~~L~~~G~-~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~  399 (475)
T PLN03226        322 NAAALANRLMSKGY-KLVTGGTDNHLVLWDLRPLGLTGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSR  399 (475)
T ss_pred             HHHHHHHHHHhCCC-EEEcCCCCCCEEEEEccCCCCCHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcHHHHHC
Confidence            99999999988765 55442 335667778754334555565544 68999997664221     35679985    222


Q ss_pred             -CCHHHHHHHHHHHHHHHHHH
Q 015890          365 -LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~  384 (398)
                       .+++|++++.+.|.++++..
T Consensus       400 g~~~~d~~~ia~~i~~~~~~~  420 (475)
T PLN03226        400 GLVEKDFEKVAEFLHRAVTIA  420 (475)
T ss_pred             CCCHHHHHHHHHHHHHHHHHh
Confidence             57899999999999999853

>PRK07036 hypothetical protein; Provisional

Probab=99.90  E-value=2.1e-20  Score=177.70  Aligned_cols=345  Identities=12%  Similarity=0.062  Sum_probs=220.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.. ...+  .....+.+..+++.+....+..-+.+.+++|+++|+
T Consensus        48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAv  125 (466)
T PRK07036         48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF--GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAV  125 (466)
T ss_pred             CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence            4689999998764  3333 58999999999987621 1111  112234556666666655443346799999999999


Q ss_pred             HHHHHHhc------c-CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC---CCCCC-------
Q 015890          103 VNIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK---TLHPD-------  151 (398)
Q Consensus       103 ~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~---~~~~d-------  151 (398)
                      +.+++...      + ++ .+|+....+|++....+.....             .+..+ +.+..   ....+       
T Consensus       126 e~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~  204 (466)
T PRK07036        126 DSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHL-SSPNPYRRPAGMSEAAFCDF  204 (466)
T ss_pred             HHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEe-cCCcccccccCCChHHHHHH
Confidence            99999753      1 22 5899999999997644322211             12222 11110   00111       


Q ss_pred             -hHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEE
Q 015890          152 -ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVN  224 (398)
Q Consensus       152 -~e~l~~~l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~  224 (398)
                       ++.+++.+.  ....+++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|...... ..+....
T Consensus       205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD  284 (466)
T PRK07036        205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD  284 (466)
T ss_pred             HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC
Confidence             234555553  22347899999777777875 57888999999999999999999999  65555322221 1111122


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHH
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVR  294 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~  294 (398)
                      +.+++|.++ .| +++|.++++   +++.+.+..       .....+++.++.+.+++.+.|+..  .+.+++..+.-..
T Consensus       285 ivt~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~  360 (466)
T PRK07036        285 IITFAKGLT-SGYQPLGAVIIS---ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPY  360 (466)
T ss_pred             EEEEccccc-cCccccEEEEEc---HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            447799997 78 489999998   788777653       123347778999999999988752  2333444444444


Q ss_pred             HHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC------C----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890          295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  364 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  364 (398)
                      .++.|.+ +++++.+.-+... |.++.+.+.....      .    ...+...+ .++||.+.+.     .+.+|+++..
T Consensus       361 l~~~L~~-l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~-----~~~~~l~Ppl  432 (466)
T PRK07036        361 FEERLAS-LRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHC-QERGLLVRPL-----EHLCVLSPPL  432 (466)
T ss_pred             HHHHHHH-hccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHH-HHCCcEEeec-----CCEEEEeCCC
Confidence            4555543 3445543334455 5666676632110      0    23455555 4899999763     2578898776


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHhc
Q 015890          365 -LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                       .+++|+++++++|.+++.++.+
T Consensus       433 ~it~~~id~~~~~l~~al~~~~~  455 (466)
T PRK07036        433 IITRAQIDEIVAILRAAIEETAD  455 (466)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHH
Confidence             7999999999999999988743

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.90  E-value=1.3e-21  Score=176.48  Aligned_cols=226  Identities=13%  Similarity=0.142  Sum_probs=156.2

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS  145 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  145 (398)
                      |..-..++++.+++++    |.+ +.+++++|+|+++..++.+++++||+|+++.++|.+....+...|.+++++ +.+.
T Consensus        57 ~~g~i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v-~~~~  130 (294)
T cd00615          57 PTGPIKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYL-KPER  130 (294)
T ss_pred             CChHHHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEe-cCcc
Confidence            4444566777777766    543 345569999999999999999999999999999999988899999998888 5432


Q ss_pred             CC-----CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-cccc
Q 015890          146 KT-----LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-KHCC  216 (398)
Q Consensus       146 ~~-----~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~~~~  216 (398)
                      +.     ..+|++.+++.+++++.+++|++++| |++|.+++   +++|+++|+++|+++|+||+|   +.+.+. +...
T Consensus       131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~  206 (294)
T cd00615         131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA  206 (294)
T ss_pred             CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence            21     36899999999986545799999988 68999999   999999999999999999999   334332 2223


Q ss_pred             ccCCcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890          217 VEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  294 (398)
Q Consensus       217 ~~~~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  294 (398)
                      ...+.++++.|++|++  +|++.|+ +..++.. ....++.... ...+.+++.+.++++..++........+..++..+
T Consensus       207 ~~~~~div~~S~hK~l--~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~  283 (294)
T cd00615         207 AMAGADIVVQSTHKTL--PALTQGSMIHVKGDL-VNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIE  283 (294)
T ss_pred             hhcCCcEEEEchhccc--chHhHHHHHHhCCCc-CCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            3346779999999987  5776655 4444321 1112222221 12244555556666666654322223444555566


Q ss_pred             HHHHHHHHhc
Q 015890          295 NREIIREALS  304 (398)
Q Consensus       295 ~~~~l~~~l~  304 (398)
                      +.+.+++.+.
T Consensus       284 ~~~~~r~~l~  293 (294)
T cd00615         284 LALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHh
Confidence            6666666553

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.90  E-value=1.8e-20  Score=188.51  Aligned_cols=313  Identities=17%  Similarity=0.104  Sum_probs=226.7

Q ss_pred             CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChH----HHHHHHHHHhccC-CC----EEEEeCCCCcChhh
Q 015890           61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN----QAFVNIVLTLCDA-GD----SVVMFAPYYFNSYM  128 (398)
Q Consensus        61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t----~a~~~~~~~l~~~-gd----~Vl~~~p~~~~~~~  128 (398)
                      .+.|.|.   +|..++...+.+++++++|.  +.|.++++++    ++++.+++.+.++ ||    .|+++...|.....
T Consensus       554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a  631 (993)
T PLN02414        554 IHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA  631 (993)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH
Confidence            5666663   57777778888888888786  8899999999    8999999999866 77    89999999998888


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-  206 (398)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-  206 (398)
                      .++..|++++.+ +.+++| .+|+++|++++++++ .+++|++++|+|-+|...+   +++|+++|+++|+++++|.++ 
T Consensus       632 ~a~~~G~~vv~v-~~d~~G-~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~  706 (993)
T PLN02414        632 SAAMCGMKIVVV-GTDAKG-NINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANM  706 (993)
T ss_pred             HHHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCH
Confidence            888899999999 887665 789999999998532 3589999999999999988   999999999999999999999 


Q ss_pred             eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHh------------hccCCCCcc---
Q 015890          207 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV------------QDNIPICAS---  267 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~------------~~~~~~~~~---  267 (398)
                      .+..+... ....+.+++++|.+|+|+    .+|..+|.+.++   +++...+-..            ...+..+.+   
T Consensus       707 ~a~~~l~~-p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~---~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~  782 (993)
T PLN02414        707 NAQVGLTS-PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAP  782 (993)
T ss_pred             HhccCcCC-ccccCCCEEEecCCccCCcCcccCCCCeeeEEEc---hhhcccCCCCccccCCCcccccCCCCcCCccchh
Confidence            44423221 222345688999999775    244568999888   4444433210            100011211   


Q ss_pred             ---hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc--EEEEeeCCC----CCCChHHHHHH
Q 015890          268 ---IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA--IYLWARLPE----KHLDDFEVVRW  337 (398)
Q Consensus       268 ---~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~  337 (398)
                         .....++...+.. +.+.+++..+....+++++++.|++...+.+..+.+.  .=+.++++.    ...+..++.++
T Consensus       783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~kr  862 (993)
T PLN02414        783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKR  862 (993)
T ss_pred             hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHH
Confidence               1222233333333 5567788888888899999999977433344433322  123344441    12356889999


Q ss_pred             HHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          338 LAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       338 ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      |+ ++||.....+ |..++.+||+++- .+.+|+++++++|.....+..+
T Consensus       863 L~-d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        863 LM-DYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             HH-HcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            87 8999875533 4457899999888 7899999999999988887764

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.89  E-value=3.1e-20  Score=176.27  Aligned_cols=348  Identities=14%  Similarity=0.125  Sum_probs=221.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-C--CcEEEecChHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K--SSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~--~~v~~~~g~t~  100 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++.+.... + ......+.+..+++.+....+.. .  ..+++++++++
T Consensus        55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~-~-~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE  132 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-H-TLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD  132 (459)
T ss_pred             CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccc-c-ccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence            4688999998874  3333 5899999999998652111 1 11122455666777776654322 1  23455588999


Q ss_pred             HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC-CC--CC----CChHHH---
Q 015890          101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS-KT--LH----PDADWL---  155 (398)
Q Consensus       101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~-~~--~~----~d~e~l---  155 (398)
                      |++.+++...  ....+|+....+|+++...+-....             .+..+ +.+. ..  +.    -+.+.+   
T Consensus       133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  211 (459)
T PRK06931        133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM-PYPHEYRCPLGIGGEAGVKALTYY  211 (459)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence            9999999764  2336899999999998755442211             11222 2111 00  00    012222   


Q ss_pred             -HHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcc
Q 015890          156 -EKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       156 -~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s  227 (398)
                       ++.++    ....+++|+++..+...|.+ .+++.++++.++|++||+++|.||++  |+..|........+....+.+
T Consensus       212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt  291 (459)
T PRK06931        212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV  291 (459)
T ss_pred             HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE
Confidence             33332    12236889988777767775 57889999999999999999999999  665554333222222233447


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhcc
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      ++|.++ .|+++|.++.+   +++ +.+.......+++.|+.+.+++.+.|+..  ++.+.+..+.-.+.++.|.+..++
T Consensus       292 ~gK~l~-gG~Pi~av~~~---~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~  366 (459)
T PRK06931        292 MSKAVG-GGLPLAVLGIK---KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKR  366 (459)
T ss_pred             eccccc-CCcceeeeeeH---HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            789998 78999988877   443 54433344567788999999999988752  233444444445555666665555


Q ss_pred             CCCCccccCCccEEEEeeCCCCCC----------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH
Q 015890          306 LGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK  371 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~  371 (398)
                      ++.+.-+... |.++.+.+.+...          +   ...+...++ ++||++.+...  ..+.+|+.++. .++++++
T Consensus       367 ~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid  442 (459)
T PRK06931        367 YPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR--NGNVVRLLPPLLITQAECE  442 (459)
T ss_pred             CCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCcCHHHHH
Confidence            6654445555 6666666632110          0   123455554 89999976431  24679998777 7999999


Q ss_pred             HHHHHHHHHHHHHhc
Q 015890          372 AAADRLRRGLEELVK  386 (398)
Q Consensus       372 ~~~~~l~~~~~~~~~  386 (398)
                      +++++|.+++.++.+
T Consensus       443 ~~~~~l~~~l~~~~~  457 (459)
T PRK06931        443 EFIDRFEQALLAAVK  457 (459)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988765

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=6e-20  Score=165.77  Aligned_cols=309  Identities=19%  Similarity=0.235  Sum_probs=216.4

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      ..+.++++.+.+.+++..   ..+...++++.+++|++      ....+.++++|.|+.++++++ +++||+|+++..+|
T Consensus        14 ~~~e~~~v~~vl~sg~i~---~G~~v~~FE~~~ae~~G------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf   84 (374)
T COG0399          14 GEEELAAVQEVLKSGWLT---GGPFVRRFEQAFAEYLG------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF   84 (374)
T ss_pred             chHHHHHHHHHHHcCCee---cChHHHHHHHHHHHHhC------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence            467788888888776543   35556889999999983      567888999999999999976 59999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      ..........|++++++ ++|.+.+.+|++.||++|.+++  |+|+..+   --|...+   +++|.++|++||+++|+|
T Consensus        85 vATan~i~~~Ga~PVFv-Did~~T~nid~~~ie~aIt~~t--KAIipVh---l~G~~~d---m~~i~~la~~~~l~vIED  155 (374)
T COG0399          85 VATANAVLLVGAKPVFV-DIDPDTLNIDPDLIEAAITPRT--KAIIPVH---LAGQPCD---MDAIMALAKRHGLPVIED  155 (374)
T ss_pred             HHHHHHHHHcCCeEEEE-ecCCcccCCCHHHHHHHcccCC--eEEEEeh---hccCCCC---HHHHHHHHHHcCCeEEEE
Confidence            99999999999999999 9999999999999999999886  9988664   4677777   999999999999999999


Q ss_pred             ece---eccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----------------C
Q 015890          204 NTY---FMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------I  262 (398)
Q Consensus       204 e~~---~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~----------------~  262 (398)
                      .++   ..|.|...... ++  +.++||  +|.++ .| ..|.+++++  +++.++++.++..                .
T Consensus       156 aAqa~Ga~y~gk~vGt~-Gd--~~~fSF~~~K~it-tg-EGGav~tnd--~ela~k~~~lr~hG~~~~~~~~y~~~~~G~  228 (374)
T COG0399         156 AAQAHGATYKGKKVGSF-GD--IGAFSFHATKNLT-TG-EGGAVVTND--EELAEKARSLRNHGLSRDAVFKYLHEELGY  228 (374)
T ss_pred             cchhccCeecCcccccc-cc--eEEEEecCCCCcc-cc-CceEEEeCC--HHHHHHHHHHHHhCcCCCccccceeeeccc
Confidence            999   44556544433 22  344455  78886 44 669999988  8888888665421                1


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCc---cEE-EEeeCCCCCCChHHHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEG---AIY-LWARLPEKHLDDFEVVRW  337 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~---~~~-~~~~~~~~~~~~~~~~~~  337 (398)
                      .+.++....+.....|+.    +++..+.-++..+.+.+.|++++...+.. +.+   .++ ..+.+++...+...+.+.
T Consensus       229 N~rm~~iqAAigl~QL~~----l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~  304 (374)
T COG0399         229 NYRLTEIQAAIGLAQLER----LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMES  304 (374)
T ss_pred             ccCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHH
Confidence            222334444444444443    45555555566667777777665423322 221   122 233444332345566665


Q ss_pred             HHHhcC----eEEecCCCC--------C-----------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          338 LAHRHG----VVVIPGGAC--------G-----------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       338 ll~~~g----i~v~~g~~~--------~-----------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      | ++.|    ++.+|....        .           ....+.+-+.. .+++++++.++.|.+++..
T Consensus       305 L-~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~  373 (374)
T COG0399         305 L-KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS  373 (374)
T ss_pred             H-HhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence            5 6774    555553221        0           02356665555 7899999999999887753

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.89  E-value=1.7e-20  Score=177.34  Aligned_cols=338  Identities=13%  Similarity=0.072  Sum_probs=212.6

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|..  .++ .+|.+.+++.+++.+.....+ +.    +.+..+++.+....+ ..+.+.+++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~----~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e  123 (428)
T PRK12389         50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT-PT----ELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVM  123 (428)
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCC-CC----HHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHH
Confidence            46889999987643  333 589999999999876432222 22    334555555554433 2468999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-CcEEE--------Eecc-CCCCC---CCCChHHHHHhhcc-CCCCeE
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GVTHI--------LVGP-CSSKT---LHPDADWLEKTLET-KPTPKL  167 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~--------~~~~-~~~~~---~~~d~e~l~~~l~~-~~~~~~  167 (398)
                      .+++...  ....+|+....+|++....+... |....        .+.+ ..++-   ...|++.+++.++. ...+++
T Consensus       124 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaa  203 (428)
T PRK12389        124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAA  203 (428)
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEE
Confidence            9999764  22368999999999976543322 21110        0000 00000   01268889888862 233688


Q ss_pred             EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEc
Q 015890          168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       168 v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      |+++..++..|.+ .+++++++|.++|++||+++|+||++  | ..+........+....+.+++|.+| .|+++|.+++
T Consensus       204 vi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lg-gG~Pi~av~~  281 (428)
T PRK12389        204 VLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIG-GGLPIGAYGG  281 (428)
T ss_pred             EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhc-CCCceeEEeE
Confidence            8888777778875 46788999999999999999999999  4 2221111111111122348899997 7899999988


Q ss_pred             cCCcHHHHHHHHH---hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCC-ccccCCccE
Q 015890          245 PSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAI  318 (398)
Q Consensus       245 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~  318 (398)
                      +   +++.+.+..   .....+++.|+.+.+++.+.|+..  ++.+++..+.....++.+.+..++++.+ .+.... ++
T Consensus       282 ~---~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~-g~  357 (428)
T PRK12389        282 R---KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLK-GA  357 (428)
T ss_pred             H---HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC-cE
Confidence            8   788877642   223346778899999998888752  2333443344444445555444445542 222333 33


Q ss_pred             EEEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       319 ~~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      + .+.+.....         +   ...+...+ .++||++.+..    .+.+.+++. .+++|++++++++.+++++
T Consensus       358 ~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~l~-~t~e~id~~~~~l~~~l~~  427 (428)
T PRK12389        358 L-TVYFTDEKVTNYDQAERSDGEAFGKFFKLM-LNQGINLAPSK----YEAWFLTTA-HTEEDIEETLEAVDRAFAQ  427 (428)
T ss_pred             E-EEEEeCCCCCChhhhcccCHHHHHHHHHHH-HHCCcEeecCC----CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence            2 233321100         1   23455555 48999998752    233556655 5899999999999999865

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=2.5e-20  Score=171.87  Aligned_cols=284  Identities=15%  Similarity=0.079  Sum_probs=198.2

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~  147 (398)
                      ..++.+.+.+..+.+  .+..++++||++|+..++.+++++||+|+++...|.+....    ++.+|+++..+ +.    
T Consensus        62 Pt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v-d~----  134 (395)
T PRK08114         62 LTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF-DP----  134 (395)
T ss_pred             hhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE-CC----
Confidence            344455555554444  35678888899999999999999999999999999776654    46689998888 32    


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC--CEEEEeece-eccCCCccccccCCcEEE
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG--SWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~--~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                        .|.+.+++++++++  ++|++++|+||+|.+.|   +++|+++|+++|  +++++|.++ .++.   ..+...+.+++
T Consensus       135 --~d~~~l~~~l~~~T--rlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~---~~pl~~GaDiv  204 (395)
T PRK08114        135 --LIGADIAKLIQPNT--KVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL---FKALDFGIDIS  204 (395)
T ss_pred             --CCHHHHHHhcCCCc--eEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc---cCHHHcCCcEE
Confidence              26789999998776  99999999999999999   999999999984  999999999 4432   22233345699


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +.|.+|.++.++ .-.|.++.+   ++..+.+...........++...+.+...|+.    +.-+.+++.+++..+.+.|
T Consensus       205 v~S~tKyl~Ghsdv~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~~na~~va~~L  277 (395)
T PRK08114        205 IQAGTKYLVGHSDAMIGTAVAN---ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRLRQHEESSLKVAEWL  277 (395)
T ss_pred             EEcCcccccCCCcceeEEEEcC---HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHH
Confidence            999999886443 567877766   56666665554445556677777666666654    6777788889999999999


Q ss_pred             ccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeE---EecCCCC-----------
Q 015890          304 SPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC-----------  352 (398)
Q Consensus       304 ~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~-----------  352 (398)
                      +++|.+. |+.|                ..+-.+.+.+....  +.+...+++++-.+.   +.-|..-           
T Consensus       278 ~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~--~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~  355 (395)
T PRK08114        278 AEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL--TDEQLANYLDNFSLFSMAYSWGGFESLILANQPEEI  355 (395)
T ss_pred             HcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc--cHHHHHHHHHhCCcceeecccCCccceeccCCchhh
Confidence            9887632 3322                12345556664210  123333444443331   1111100           


Q ss_pred             ----------CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 ----------GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 ----------~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                ..++.||+|++-   |+.+.+++.|.+++..+
T Consensus       356 ~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~  394 (395)
T PRK08114        356 AAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI  394 (395)
T ss_pred             hccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                      012579999996   67788888888888753

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.89  E-value=4.2e-21  Score=174.93  Aligned_cols=347  Identities=19%  Similarity=0.173  Sum_probs=214.4

Q ss_pred             CchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCC
Q 015890           15 EMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLY   88 (398)
Q Consensus        15 ~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~   88 (398)
                      +.....-+.+.....++.++|--..|.  .+|.+++++...+.+.-.-+|      +-.....++++...+..+++++.+
T Consensus         5 d~ei~~li~~e~~rq~~~l~LiaSEN~--~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~   82 (399)
T PF00464_consen    5 DPEIYELIEKEEERQRSTLNLIASENY--MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE   82 (399)
T ss_dssp             THHHHHHHHHHHHHHHHSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S
T ss_pred             CHHHHHHHHHHHHHHhcCccccCcccc--cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC
Confidence            444444455555555678898877766  478999988777755322222      223444567777777788888987


Q ss_pred             CC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-----H-----HhcCcEEEEeccCCCCCCCCChHH
Q 015890           89 KS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----F-----QMTGVTHILVGPCSSKTLHPDADW  154 (398)
Q Consensus        89 ~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~d~e~  154 (398)
                      ++    +|-. .|++.|+..++.+|+++||+|+..++.+.++...     .     .....+.+.+ +++++...+|.|+
T Consensus        83 ~~~w~anvqp-~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~~d~~~~~ID~d~  160 (399)
T PF00464_consen   83 PKEWYANVQP-HSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPY-PVDPDTGLIDYDE  160 (399)
T ss_dssp             TTTEEEE----SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEE-EB-TTTSSB-HHH
T ss_pred             cccceEEeec-CCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEee-eeecCCCeECHHH
Confidence            44    3333 5666999999999999999999988887655421     1     2233578888 8887778899999


Q ss_pred             HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccc
Q 015890          155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       155 l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~  231 (398)
                      +++.++... |++|++...++|  ..++   ++++.++|++.|.+|++|.+|   +...|.-..+..+ .+++++|.+|+
T Consensus       161 l~~~a~~~k-PklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKt  233 (399)
T PF00464_consen  161 LEKLAKEHK-PKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKT  233 (399)
T ss_dssp             HHHHHHHH---SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGG
T ss_pred             HHHHHhhcC-CCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeecccc
Confidence            999998654 799999854433  2344   899999999999999999999   4445554455544 45889999999


Q ss_pred             cCCCcceeEEEEccCC-----------cHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHH
Q 015890          232 YGMMGWRVGYIAYPSE-----------VEGFATQLLKVQD-NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREI  298 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~-----------~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~  298 (398)
                      |  +|.|.|.|.++++           .+++.+++..... ....++.....++.+-++.. ....+.++.+++.++++.
T Consensus       234 l--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~  311 (399)
T PF00464_consen  234 L--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKA  311 (399)
T ss_dssp             G---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred             c--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence            8  6888999988810           1678888876543 22233444444555455544 345578999999999999


Q ss_pred             HHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC-----CCHH
Q 015890          299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG-----LVED  368 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~-----~~~~  368 (398)
                      |.+.|.+.|...+.+...+..+++++.....+..+... .|++.||.+.....+.     .+..|||+...     ..++
T Consensus       312 La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~-~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~  390 (399)
T PF00464_consen  312 LAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEK-ALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEE  390 (399)
T ss_dssp             HHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHH-HHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HH
T ss_pred             HHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHH-HHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHH
Confidence            99999998884444555577888898654445555554 5579999995432221     24689999544     3445


Q ss_pred             HHHHHHH
Q 015890          369 DCKAAAD  375 (398)
Q Consensus       369 ~~~~~~~  375 (398)
                      |+.+..+
T Consensus       391 dm~~iA~  397 (399)
T PF00464_consen  391 DMKEIAE  397 (399)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555444

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PLN03032 serine decarboxylase; Provisional

Probab=99.89  E-value=3.6e-20  Score=169.86  Aligned_cols=310  Identities=13%  Similarity=0.063  Sum_probs=215.7

Q ss_pred             cHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcE--EEecChHHHHHHHHHHhc--cCCCEEE
Q 015890           45 PKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVV  117 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl  117 (398)
                      .+.+++++...+.+..   ...+.......++.+.+.+++.+.++.+++++  ++|+|+|+|+..++.+..  .++..|+
T Consensus        36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi  115 (374)
T PLN03032         36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY  115 (374)
T ss_pred             ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence            3456777777765421   11222233568899999999999999988776  999999999998888765  2445899


Q ss_pred             EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      ++.-.|++....++.+|..+..+ |++.+| .+|+++|++++++++ .+.+|+++..+|+||.+.|   +++|+++|+++
T Consensus       116 ~s~~~H~Sv~kaa~~lg~~~~~V-~~d~~g-~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~  190 (374)
T PLN03032        116 ASRESHYSVFKAARMYRMEAVKV-PTLPSG-EIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL  190 (374)
T ss_pred             eCCCceeHHHHHHHHcCCCCeEe-eeCCCC-cCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh
Confidence            99999999999999999988888 887665 789999999998532 2578888889999999999   99999999999


Q ss_pred             C-----CEEEEeece-e---ccCCC-ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------
Q 015890          197 G-----SWLVVDNTY-F---MYDGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------  260 (398)
Q Consensus       197 ~-----~~livDe~~-~---~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~------  260 (398)
                      |     +++++|.++ .   ++... +......+.+-++.|.||.++ ....+|.++.+   .+.++.+.....      
T Consensus       191 g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g-~P~g~G~ll~r---~~~~~~~~~~~~Yl~~~d  266 (374)
T PLN03032        191 GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLG-CPMPCGVALTR---KKHVKALSQNVEYLNSRD  266 (374)
T ss_pred             CCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccC-CCcCeEEEEEE---chhhHhhccCCcccCCCC
Confidence            6     589999999 2   22111 111111224466789999887 34558998888   344444422111      


Q ss_pred             -cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890          261 -NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL  338 (398)
Q Consensus       261 -~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  338 (398)
                       ....+-+......+...|.. +.+.+.+..++..++++++.+.|++.+...+..|. .+.+.+.-+.    ...    +
T Consensus       267 ~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~-~~~V~f~~~~----~~~----~  337 (374)
T PLN03032        267 ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL-SSTVVFERPM----DEA----F  337 (374)
T ss_pred             CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC-ceEEEEcCCC----cHh----H
Confidence             11122233344444445544 56778999999999999999999887764445555 6666555442    111    2


Q ss_pred             HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          339 AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       339 l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                        .+|..+.+     ..+.+|+++.. .+.+.++++++.|++
T Consensus       338 --~~~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        338 --IKKWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             --hheeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence              24555554     23589999887 677888888887764

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.89  E-value=8.8e-21  Score=165.54  Aligned_cols=319  Identities=17%  Similarity=0.150  Sum_probs=229.0

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc--CCC
Q 015890           43 QPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--AGD  114 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~--~gd  114 (398)
                      ..+|+|++|+.+.+.....+.-      +.+.....|++++++.-    +  .+.-++.++.--|++..+..|.+  ||-
T Consensus       185 s~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH----q--K~aALlFsSCfVANDstLftLak~lpgc  258 (570)
T KOG1360|consen  185 SRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH----Q--KEAALLFSSCFVANDSTLFTLAKKLPGC  258 (570)
T ss_pred             cCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh----c--CcceeeeeeeeeccchHHHHHHHHCCCc
Confidence            4699999999999876331111      11233345566666543    3  33345555565777777777643  677


Q ss_pred             EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      .|......|.+.....+..++.-.-+    .   +-|+++|++++.  +...||.|.+++.++.+|.+.|   |++|+++
T Consensus       259 ei~SD~gNHASMI~GIrns~v~K~IF----r---HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDv  328 (570)
T KOG1360|consen  259 EIFSDEGNHASMIQGIRNSRVPKHIF----R---HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDV  328 (570)
T ss_pred             EEeccccchHHHHHHhhhcCCcceee----c---cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHH
Confidence            88888888888888888777643333    1   228888998887  4445899999999999999999   9999999


Q ss_pred             HHHcCCEEEEeece-e-ccCCCcccc-----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC
Q 015890          193 CKAAGSWLVVDNTY-F-MYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC  265 (398)
Q Consensus       193 ~~~~~~~livDe~~-~-~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~  265 (398)
                      +++||.+.++||++ . .|+...-..     .....+|+.+++.|+||+-|   ||+...   ..+++.++.+..++-++
T Consensus       329 ah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat---~~LvDmiRSyAaGFIFT  402 (570)
T KOG1360|consen  329 AHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT---RKLVDMIRSYAAGFIFT  402 (570)
T ss_pred             HHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh---hhHHHHHHHhcCceEEe
Confidence            99999999999999 2 333222211     12234588999999999888   999988   79999999887655444


Q ss_pred             --cchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          266 --ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       266 --~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                        .++...+.+.++++.. .+..+..++..+++..++++.|.+.|. -+.+.+ +..+.+.+... .-+.+..+.|+.++
T Consensus       403 TSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~Gi-PVi~~p-SHIiPv~vgda-~l~~~~sd~Li~~h  479 (570)
T KOG1360|consen  403 TSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGI-PVIPNP-SHIIPVRVGDA-ALAKQASDILISKH  479 (570)
T ss_pred             cCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCC-cccCCC-cceeeeeccCH-HHHHHHHHHHHHhc
Confidence              4566666666666641 122356667788889999999999887 444444 56666666432 24567888899999


Q ss_pred             CeEEecCCCC---CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          343 GVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       343 gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ||+|..-.+.   .+...+||...- .+.+.++.+++.|..++.++.-
T Consensus       480 ~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l  527 (570)
T KOG1360|consen  480 NIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGL  527 (570)
T ss_pred             CeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence            9999877654   345689998765 6888999999999999988753

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.89  E-value=4.2e-21  Score=177.64  Aligned_cols=316  Identities=14%  Similarity=0.100  Sum_probs=205.2

Q ss_pred             CCCCCcHHHHHHHHHhhcCC---CCCCCCCC---CCcHHHHHHHHHHHhhhcCC-CCCcEEEecC-hHHHHHHHHHHhcc
Q 015890           40 VYWQPPKMAMEKVKELVWDP---SISKYGAD---EGLPELRDALVKKLNQENKL-YKSSVMVTAG-ANQAFVNIVLTLCD  111 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~---~~~~y~~~---~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g-~t~a~~~~~~~l~~  111 (398)
                      .+...|+.|++++.+.+.+.   ....|...   ....++.+..++.++++++. ++++|++++| +|++++.++.++..
T Consensus         6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~   85 (355)
T cd00611           6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG   85 (355)
T ss_pred             CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence            36668999999999987431   12223223   22234555555556666676 4678999977 99999999999987


Q ss_pred             CC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCC-hHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          112 AG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       112 ~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      ++   |.|+. .+....+...++..|.++..+ +.++++...+ .+..+..++++  +++|.+++..|.||+..+     
T Consensus        86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~lV~~~h~~t~tG~~~~-----  156 (355)
T cd00611          86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIV-AAKEEGKYTKIPDVETWDLAPD--AAYVHYCSNETIHGVEFD-----  156 (355)
T ss_pred             CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEE-ecccccCCCCCCCHhhcCCCCC--CCEEEEeCCcccccEEcc-----
Confidence            44   44433 222223344778889988888 6554331113 22333344444  599999999999999743     


Q ss_pred             HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh--------
Q 015890          188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV--------  258 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~--------  258 (398)
                         ++++.+|+++++|.++ ++.......  ..+  ++..|.+|.+|++|  +|.++++   +++.+++...        
T Consensus       157 ---~i~~~~g~~~~VDa~qs~g~~~idv~--~~~--~~~ss~~K~lGP~G--~g~l~~~---~~~~~~~~~~~~~~~~~~  224 (355)
T cd00611         157 ---EVPDTGGVPLVADMSSNILSRPIDVS--KFG--VIYAGAQKNLGPAG--VTVVIVR---KDLLGKARKITPSMLNYK  224 (355)
T ss_pred             ---eecccCCCeEEEEccccccCCCCCHH--HhC--EEEeecccccCCCc--eEEEEEC---HHHHhhcccCCCCcccHH
Confidence               2344599999999999 665433322  223  45566899998776  6888888   6666554321        


Q ss_pred             ----hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCc-c-ccC--CccEEEEeeCCCCC
Q 015890          259 ----QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGA-V-KGG--EGAIYLWARLPEKH  328 (398)
Q Consensus       259 ----~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~--~~~~~~~~~~~~~~  328 (398)
                          .....+++|.....++.++++... . .++++.++.+++.+++++.|++++++. . ..+  ..+..+.+.++.. 
T Consensus       225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~-  303 (355)
T cd00611         225 THADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE-  303 (355)
T ss_pred             HHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh-
Confidence                011245778888888888888633 2 378888899999999999999985421 1 111  2123355555432 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      ....++...+ .+.|+.+.++..  ..+.+|+|+.. .+.+|+++++++|+++
T Consensus       304 ~l~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         304 ELEKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             hhhHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            1123333444 478998655543  34789999988 8999999999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=3.7e-20  Score=174.08  Aligned_cols=287  Identities=21%  Similarity=0.212  Sum_probs=189.7

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~  143 (398)
                      +...++++.++++.    +.  +..++++|+++|+++++.+++++||+|+++...|.+....+    +..|++++++ +.
T Consensus        64 p~~~~le~~lA~l~----g~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~  136 (433)
T PRK08134         64 PTVAVLEERVAALE----GG--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV-KP  136 (433)
T ss_pred             hHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE-CC
Confidence            34566666666665    43  34688999999999999999999999999999997654433    5589999988 54


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                      +      |++.+++.+++++  ++|++.+|+||+|.+.|   +++|+++|+++|+++|+|.++ .++...+   ...+.+
T Consensus       137 ~------d~~~l~~~i~~~T--klV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~p---l~~GaD  202 (433)
T PRK08134        137 G------DIDGWRAAIRPNT--RLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLRP---FEHGAD  202 (433)
T ss_pred             C------CHHHHHHhcCCCC--eEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---hhcCCC
Confidence            2      7899999999876  99999999999999999   999999999999999999999 4443222   123456


Q ss_pred             EEEcccccccCCCcceeEEEEccC-CcH-----------------------------HHHHHHH-HhhccCCCCcchHHH
Q 015890          223 VNLFSFSKAYGMMGWRVGYIAYPS-EVE-----------------------------GFATQLL-KVQDNIPICASIISQ  271 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G~i~~~~-~~~-----------------------------~~~~~l~-~~~~~~~~~~~~~~~  271 (398)
                      +++.|.+|.++.+|-.+|.++... ...                             .+....+ ..........++...
T Consensus       203 ~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A  282 (433)
T PRK08134        203 LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNA  282 (433)
T ss_pred             EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHH
Confidence            889999999987775566554321 000                             0000000 011122334555555


Q ss_pred             HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChHH
Q 015890          272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~  333 (398)
                      +.+...|+.    +..+.++..+++.++.+.|+.++.+. +..|                . .+-.+.+++..    +.+
T Consensus       283 ~l~~~gL~t----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~----~~~  354 (433)
T PRK08134        283 WQLLQGIET----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG----GRA  354 (433)
T ss_pred             HHHhcCCCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC----CHH
Confidence            544444443    67777788888888888888776532 2111                1 13345556642    123


Q ss_pred             HHHHHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          334 VVRWLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       334 ~~~~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ...+++++-.+...   -|...                      + .++.||+|++-   |+.+.+++.|.+++++..+
T Consensus       355 ~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dli~dl~~Al~~~~~  430 (433)
T PRK08134        355 AGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL---EDADDLIDDLKRALKAAEK  430 (433)
T ss_pred             HHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhh
Confidence            33344444444321   11110                      0 13579999997   6777888999998887554

>PRK06148 hypothetical protein; Provisional

Probab=99.89  E-value=2.8e-20  Score=191.57  Aligned_cols=346  Identities=12%  Similarity=0.068  Sum_probs=228.4

Q ss_pred             HcCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      .+|+.|+||..|...++ .+|++.+++.+++.+.....    ....+....+++.+....+...+.+.+++||++|++.+
T Consensus       621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~----~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~A  696 (1013)
T PRK06148        621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT----RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLA  696 (1013)
T ss_pred             CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC----CcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHH
Confidence            45899999988865554 68999999999987531111    11234455666666655443346799999999999999


Q ss_pred             HHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC---CCCC-CC-------hHHHHHhh
Q 015890          106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS---KTLH-PD-------ADWLEKTL  159 (398)
Q Consensus       106 ~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~---~~~~-~d-------~e~l~~~l  159 (398)
                      ++...  ....+|+....+|++....+-....             .+..+ +.+.   ..+. .+       .+.+++.+
T Consensus       697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~l~~~i  775 (1013)
T PRK06148        697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVA-EVPDSYRGPERWPDAEHGRRFAESVAEQI  775 (1013)
T ss_pred             HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEc-CCCCccccCCCCChhhhHHHHHHHHHHHH
Confidence            99864  2336899999999987643222110             11111 1110   0011 01       13455555


Q ss_pred             c----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-ccccccCCcEEEEcccccc
Q 015890          160 E----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       160 ~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~~~~~i~~~s~sK~  231 (398)
                      +    ....+++|+++..+...|. ..|++.++++.++|+++|+++|.||++  |+..|. .......+....+.+++|.
T Consensus       776 ~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~  855 (1013)
T PRK06148        776 AAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKP  855 (1013)
T ss_pred             HhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeeccc
Confidence            3    2234788988877766676 467889999999999999999999999  665554 2222222333345578999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      +| .|+++|.++++   +++.+.+.... ...+++.|+.+.+++.+.|+..  ++..++..+.-...++.|.+..++++.
T Consensus       856 lg-gG~Plgav~~~---~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~  931 (1013)
T PRK06148        856 IG-NGHPMGAVVTT---REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDI  931 (1013)
T ss_pred             cc-CCcceEEEEEc---HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            98 88999999999   78887765321 3457788999999999988752  233444444445556666665556665


Q ss_pred             CccccCCccEEEEeeCCCCCC-------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +.-+... |.++.+.+.....       ....+++.++ ++||++.+...  ..+.+||.+.. .+++++++++++|.++
T Consensus       932 i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~~~ 1007 (1013)
T PRK06148        932 IGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLDDV 1007 (1013)
T ss_pred             ceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence            4445555 6777777643210       1234556554 89999976421  24779998777 7999999999999999


Q ss_pred             HHHHh
Q 015890          381 LEELV  385 (398)
Q Consensus       381 ~~~~~  385 (398)
                      +.++.
T Consensus      1008 l~~~~ 1012 (1013)
T PRK06148       1008 LAAAL 1012 (1013)
T ss_pred             HHHHh
Confidence            98753

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.89  E-value=2.4e-20  Score=175.41  Aligned_cols=342  Identities=12%  Similarity=0.033  Sum_probs=214.6

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+|+..|..  .++ .+|.+.+++.+++.+.....+ +    .+....+++.+....+...+.+.+++++++|++
T Consensus        50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e  124 (433)
T PRK00615         50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGL-T----SEQEILFAEELFSYLGLEDHKIRFVSSGTEATM  124 (433)
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            46889999987743  333 589999999999876432111 2    234455666665544433368999999999999


Q ss_pred             HHHHHhcc-CC-CEEEEeCCCCcChhhH---HHhc-CcE--E--EEe--ccCCCCCC---CCChHHHHHhhcc-CCCCeE
Q 015890          104 NIVLTLCD-AG-DSVVMFAPYYFNSYMS---FQMT-GVT--H--ILV--GPCSSKTL---HPDADWLEKTLET-KPTPKL  167 (398)
Q Consensus       104 ~~~~~l~~-~g-d~Vl~~~p~~~~~~~~---~~~~-g~~--~--~~~--~~~~~~~~---~~d~e~l~~~l~~-~~~~~~  167 (398)
                      .+++.... .| .+|+....+|+++...   .... +-.  .  ...  .+......   .-|++.+++.+.. ...+++
T Consensus       125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aa  204 (433)
T PRK00615        125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAG  204 (433)
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEE
Confidence            99997652 23 6899999999997521   1111 100  0  000  00000000   1267889888863 233678


Q ss_pred             EEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeeceec-cCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          168 VSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       168 v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      |+++..+...|.+. +++.+++|.++|++||+++|+||++.+ ..|........+....+.+++|.+| .|+++|+++++
T Consensus       205 vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~~gK~lg-gG~p~~av~~~  283 (433)
T PRK00615        205 VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITVYGKILG-GGLPAAAVVAH  283 (433)
T ss_pred             EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEEEccccc-CCcceeeeeec
Confidence            88887677778754 577899999999999999999999922 2332211111111111235899997 77889999999


Q ss_pred             CCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCC-CccccCCccEE
Q 015890          246 SEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE-GAVKGGEGAIY  319 (398)
Q Consensus       246 ~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~  319 (398)
                         +++++.+...   ....+++.++...+++.+.|+..  .+.+++..+.....++.+++.+++.+. +.... . +.+
T Consensus       284 ---~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~-G~~  358 (433)
T PRK00615        284 ---KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y-GSM  358 (433)
T ss_pred             ---HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e-ceE
Confidence               7888877432   12345567888888888888752  233444444444455556666555443 22233 3 566


Q ss_pred             EEeeCCCCCC---------C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          320 LWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       320 ~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.+.+.....         +   ...+...++ ++||++.+...   +. .=++.. .+++|++++++++.++++++.
T Consensus       359 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~---~~-~~ls~~-ht~~did~~~~a~~~~~~~~~  430 (433)
T PRK00615        359 FSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPF---EA-SFLSSA-HSMENLDYAQNVLIDSLEKVF  430 (433)
T ss_pred             EEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCccc---cc-cceecC-CCHHHHHHHHHHHHHHHHHHh
Confidence            6666643210         1   124566665 78999987542   11 124555 589999999999999998865

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.89  E-value=2.2e-20  Score=176.14  Aligned_cols=338  Identities=14%  Similarity=0.092  Sum_probs=213.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ .+|++.+++.+++.+......  .....+....+++.+.+..+..-+.+++++++++|++
T Consensus        42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e  119 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF--GGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVE  119 (427)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHH
Confidence            4688999998764  2332 589999999999876321111  0011223445555555544433468999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhc-CcE-------------EEEeccCCCCCC-----CCChHHHH
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GVT-------------HILVGPCSSKTL-----HPDADWLE  156 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~-----~~d~e~l~  156 (398)
                      .+++....       +| .+|+....+|++....+-.. +..             ...+ +.+...+     .-|+++++
T Consensus       120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~l~  198 (427)
T TIGR00508       120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFA-PAPQNRFDEEWNEEAITPLA  198 (427)
T ss_pred             HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEc-CCCCccccchhHHHHHHHHH
Confidence            99987542       23 68999999999865433222 111             0111 1111101     01456777


Q ss_pred             Hhhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccc
Q 015890          157 KTLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~~-~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~s  229 (398)
                      +.+.. ...+++|+++.. ++..|. ..+.+++++|.++|++||+++|+||++  ++..|........  ..+++  +++
T Consensus       199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~--~~g  276 (427)
T TIGR00508       199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDIL--CVG  276 (427)
T ss_pred             HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEE--Eec
Confidence            77752 233677888863 666666 457889999999999999999999999  5555543222111  12233  479


Q ss_pred             cccCCCcc-eeEEEEccCCcHHHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          230 KAYGMMGW-RVGYIAYPSEVEGFATQLLKVQ-----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       230 K~~~~~G~-r~G~i~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      |.++ +|+ .++.++.+   +++.+.+....     ...++..++++.+++.++|+...+  ++..++.+++.+++++.|
T Consensus       277 K~l~-gG~~p~~a~~~~---~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L  350 (427)
T TIGR00508       277 KALT-GGYMTLSATVTT---DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKREL  350 (427)
T ss_pred             hhhh-cCcccceEEEEc---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence            9996 785 78888888   78878776421     234566788888888888874111  122344555555555555


Q ss_pred             ccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          304 SPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       304 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      +++..   +.-.... +.++.+.+... .....+..+++ ++||.+.+.     ...+|+++.. .+++|++++++++.+
T Consensus       351 ~~l~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~  422 (427)
T TIGR00508       351 SPLRKNPVVKDVRVL-GAIGVVEMYKP-VNVEELQKKFV-EQGVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIE  422 (427)
T ss_pred             HHhhcCCCEEeEecc-ccEEEEEECCc-cCHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            54322   1112223 55566666432 23566777765 889999764     2479998876 689999999999999


Q ss_pred             HHHH
Q 015890          380 GLEE  383 (398)
Q Consensus       380 ~~~~  383 (398)
                      ++.+
T Consensus       423 ~l~~  426 (427)
T TIGR00508       423 ALHE  426 (427)
T ss_pred             HHhc
Confidence            8854

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=4.1e-20  Score=173.54  Aligned_cols=286  Identities=19%  Similarity=0.188  Sum_probs=187.3

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~  144 (398)
                      ....+++.++++.    |.  +..+++++|++|+..++.+++++||+|+++...|.+...    .++..|++++.+ + +
T Consensus        70 ~~~~Le~~lA~l~----g~--~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-d  141 (436)
T PRK07812         70 TQDVVEQRIAALE----GG--VAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV-E-D  141 (436)
T ss_pred             hHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEE-C-C
Confidence            3345555555554    53  346888888999999999999999999999988876553    344578888777 3 2


Q ss_pred             CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i  223 (398)
                      .    .|++.+++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|+++ .+....   ....+.++
T Consensus       142 ~----~d~e~l~~ai~~~t--klV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~~---pl~~GaDi  209 (436)
T PRK07812        142 P----DDLDAWRAAVRPNT--KAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLIR---PLEHGADI  209 (436)
T ss_pred             C----CCHHHHHHhCCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC---chhcCCCE
Confidence            1    28899999998765  99999999999999999   999999999999999999998 433221   12234558


Q ss_pred             EEcccccccCCCcceeEEEEccCC-c---------------------------HHHHHHHH-HhhccCCCCcchHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSE-V---------------------------EGFATQLL-KVQDNIPICASIISQHLA  274 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~-~---------------------------~~~~~~l~-~~~~~~~~~~~~~~~~~~  274 (398)
                      ++.|++|.+|..|--+|.+++.++ .                           +.++..+. ..........++...+.+
T Consensus       210 vv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~  289 (436)
T PRK07812        210 VVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI  289 (436)
T ss_pred             EEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            889999999866655666554321 0                           00111111 112223455566555554


Q ss_pred             HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccC----------------C-ccEEEEeeCCCCCCChHHHHH
Q 015890          275 LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG----------------E-GAIYLWARLPEKHLDDFEVVR  336 (398)
Q Consensus       275 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~  336 (398)
                      ...|+.    +..+.++..+++..+.+.|++++.+ +++.|                . .|-.+.+++..+    .+...
T Consensus       290 ~rgl~t----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~----~~~~~  361 (436)
T PRK07812        290 AQGLET----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGG----VEAGK  361 (436)
T ss_pred             hcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC----HHHHH
Confidence            444443    6778888889999999999988763 22222                1 133455566421    22233


Q ss_pred             HHHHhcCeEEe---cCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          337 WLAHRHGVVVI---PGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       337 ~ll~~~gi~v~---~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +++++-.+.-.   -|...                      + .++.||+|++-   |+.+.+++.|.+++.+..
T Consensus       362 ~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl---Ed~~dli~dl~~Al~~~~  433 (436)
T PRK07812        362 AFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI---EGIDDILADLEAGFAAAK  433 (436)
T ss_pred             HHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhh
Confidence            34433333222   12111                      0 13579999997   677788888888887654

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.88  E-value=5.1e-20  Score=168.05  Aligned_cols=345  Identities=14%  Similarity=0.087  Sum_probs=228.8

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~  102 (398)
                      +|+.++|-..|-  +..+ -.|++.+|+.+++.+-  ..|.+. ..... -..+++.|.+..+ .+-+.|++++|+++|+
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l--~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAv  118 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKL--PHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAV  118 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhC--CchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHH
Confidence            466777766543  1221 4899999999999872  222111 11111 3455555555445 3367899999999999


Q ss_pred             HHHHHHhc-------cCC-CEEEEeCCCCcChhhHHHhcC--------------cEEEEeccCCC---C---C-CC----
Q 015890          103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQMTG--------------VTHILVGPCSS---K---T-LH----  149 (398)
Q Consensus       103 ~~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~---~---~-~~----  149 (398)
                      +.+++...       ++. .+++.-..+|++-.-.+-+.|              ..+..+ +.+.   .   + +.    
T Consensus       119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~-~~P~~y~~~~~~~~~~~~~  197 (449)
T COG0161         119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHL-PAPYAYRRGFFGEGDEEFA  197 (449)
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceec-CCCcccccCCCCCChHHHH
Confidence            99999864       232 358888999987443221111              112222 2221   0   1 11    


Q ss_pred             CChHHHHHhhcc-C-CCCeEEEEeCCCCC-CccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890          150 PDADWLEKTLET-K-PTPKLVSVVNPGNP-SGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       150 ~d~e~l~~~l~~-~-~~~~~v~i~~p~np-tG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i  223 (398)
                      -.+++|++++.. + ..+++++++..... +|++ +|+..++++.++|++||+++|.||+-  |+..|..+.....+...
T Consensus       198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~P  277 (449)
T COG0161         198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVP  277 (449)
T ss_pred             HHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCC
Confidence            125677777763 2 33788888865555 7875 56678999999999999999999999  88888776665544444


Q ss_pred             EEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNR  296 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~  296 (398)
                      .+-+++|.++-+-+++|.+++.   +++.+.+...     ..+.+++.|+.+.+++.+.|+.  .++++++..+.-....
T Consensus       278 Di~~~aKGLT~GY~Pl~a~l~~---~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~  354 (449)
T COG0161         278 DILCLAKGLTGGYLPLSAVLTS---DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQ  354 (449)
T ss_pred             CeeeecccccccchhhHhHhhh---HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            4558889997344688988888   6777776543     4567788999999999998885  2355555555555566


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE  367 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~  367 (398)
                      +.|.+.+...+.+.-+... |++..+++.....+        ...+...+ .++|++++|.     .+.+-++... .+.
T Consensus       355 ~~L~~~l~~~p~VgdVR~~-Gli~~iElv~d~~t~~~f~~~~~~~~~~~~-~e~Gl~iRp~-----g~~i~~~PPliit~  427 (449)
T COG0161         355 AGLQAALADHPLVGDVRGL-GLIGAIELVADKATKTPFEARVGARVRAAA-LERGLLIRPL-----GDVIYLMPPLIITR  427 (449)
T ss_pred             HHHHHhcccCCcEEEeecc-ceEEEEEEecccccccchhhhHHHHHHHHH-HHCCeEEeec-----CCEEEEcCCccCCH
Confidence            6676666655554445555 77777777543321        23444444 5899999996     3466666665 799


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 015890          368 DDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~~~~~  386 (398)
                      ++++++++++.+++++...
T Consensus       428 ~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         428 EEIDELVDALREALDETLA  446 (449)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999988654

>PLN02880 tyrosine decarboxylase

Probab=99.88  E-value=7.9e-20  Score=174.36  Aligned_cols=335  Identities=13%  Similarity=0.079  Sum_probs=227.8

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-------cEEEecChHHHHHHHHHHhcc------
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-------SVMVTAGANQAFVNIVLTLCD------  111 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~------  111 (398)
                      ++.++..+.....+.....|..++...++++.+.+|+.+..|.+..       .-++++|+|+++..++.+...      
T Consensus        95 ~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~  174 (490)
T PLN02880         95 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKV  174 (490)
T ss_pred             HHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHh
Confidence            4555555544445544566667788899999999999999988653       367899999999888776542      


Q ss_pred             -----CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCC-CCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCc
Q 015890          112 -----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSG  178 (398)
Q Consensus       112 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG  178 (398)
                           +.-.|++++-+|.+...+++.+|+   .++.+ |++. ..+.+|++.|++++++    +..|-+|+.+.++..||
T Consensus       175 g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V-p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~G  253 (490)
T PLN02880        175 GKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL-KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSST  253 (490)
T ss_pred             cccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe-ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCc
Confidence                 111456788889999999999998   36778 8875 3568999999999962    22356777778899999


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          179 TYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      .+.|   +++|+++|+++|+|++||.+| ..  .... ...... ...+-++.++||+++ ....+|.++.++. ..+..
T Consensus       254 aiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~-~~l~~  328 (490)
T PLN02880        254 AVDP---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDR-NALIQ  328 (490)
T ss_pred             ccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCH-HHHHH
Confidence            9999   999999999999999999999 21  1111 001110 123466779999995 6778999888852 22333


Q ss_pred             HHHHhhcc--------------CCCC---cchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890          254 QLLKVQDN--------------IPIC---ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  315 (398)
Q Consensus       254 ~l~~~~~~--------------~~~~---~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  315 (398)
                      .+..-..+              ..++   ...+....+...++. +.+.+.++.++..++++++.+.+++.+..++..++
T Consensus       329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~  408 (490)
T PLN02880        329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR  408 (490)
T ss_pred             HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence            32111000              0000   001112222223333 55777888888889999999999887766777665


Q ss_pred             ccEEEEeeCCCCCCCh-------HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhc
Q 015890          316 GAIYLWARLPEKHLDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ..+.++++++....+.       .++.++|.++..+++.+ ..+.+..++|++++.  +++++++.+++.|.+..+++..
T Consensus       409 ~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~  487 (490)
T PLN02880        409 IFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG  487 (490)
T ss_pred             ceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            5667777775322111       34566665445565544 334456799999887  4568999999999999888754

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.88  E-value=7.3e-19  Score=165.95  Aligned_cols=323  Identities=16%  Similarity=0.194  Sum_probs=207.2

Q ss_pred             CCeEEcCCccCCCCC-----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           30 KNAVSLAQGVVYWQP-----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~-----~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      .....|+.|.++.+.     +++-+.++.+.+...+ ..  ......++++.+++++    +.  +++++++|+|+++..
T Consensus        23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~--~G~~~~~fe~~lA~~~----g~--~~~v~~~sGt~al~~   93 (438)
T PRK15407         23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LT--TGRFNDAFEKKLAEFL----GV--RYALLVNSGSSANLL   93 (438)
T ss_pred             cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-cc--CChhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHH
Confidence            344556777765542     2333444545444322 11  2233578888888887    33  468999999999999


Q ss_pred             HHHHh---------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          105 IVLTL---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       105 ~~~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      ++.++         +++||+|+++.++|..+...+...|++++.+ +.+...+.+|++.+++.+++++  ++|+++++  
T Consensus        94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v-dvd~~~~~id~~~le~~i~~~t--kaVi~~~~--  168 (438)
T PRK15407         94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFV-DVELPTYNIDASLLEAAVSPKT--KAIMIAHT--  168 (438)
T ss_pred             HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHcCcCC--eEEEEeCC--
Confidence            99876         3789999999999999999999999999999 8876667889999999998765  89988853  


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                       +|...+   +++|.++|+++|+++|+|++| ++  +.|...... ++  +.++|+  +|.+. .|- .|++++++  ++
T Consensus       169 -~G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~-gd--~~~fSf~~~k~~~-~ge-GG~l~t~d--~~  237 (438)
T PRK15407        169 -LGNPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF-GD--IATLSFYPAHHIT-MGE-GGAVFTND--PL  237 (438)
T ss_pred             -CCChhh---HHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc-Cc--eEEEeCCCCCCcc-ccC-ceEEEECC--HH
Confidence             565555   899999999999999999999 43  445433322 23  444555  57674 332 58999887  67


Q ss_pred             HHHHHHHhhcc---------------------------------------CCCCcchHHHHHHHHHhcCCchHHHHHHHH
Q 015890          251 FATQLLKVQDN---------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKD  291 (398)
Q Consensus       251 ~~~~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  291 (398)
                      +.+.++..+..                                       ..+.++....+.+...|+    .+++..+.
T Consensus       238 l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~----~l~~~~~~  313 (438)
T PRK15407        238 LKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLE----KLPGFIEA  313 (438)
T ss_pred             HHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHH----HHHHHHHH
Confidence            76665543321                                       111223333333333443    24566666


Q ss_pred             HHHHHHHHHHHhccCCC-Cccc-cCCc---cE-EEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCC--------CC---
Q 015890          292 LVRNREIIREALSPLGE-GAVK-GGEG---AI-YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGA--------CG---  353 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~-~~~~-~~~~---~~-~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~--------~~---  353 (398)
                      -+++.+++.+.|+.++. .... .+.+   .+ .+.+.++.. ..+..++++.| +++||.++....        |.   
T Consensus       314 R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p~~~~~~  392 (438)
T PRK15407        314 RKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYL-EENKIGTRLLFAGNLTRQPYFKGVK  392 (438)
T ss_pred             HHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCccccCCCccccChhhhhcC
Confidence            66677777888877653 2221 1221   12 223344321 12457778877 588997754321        00   


Q ss_pred             ---C----------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          354 ---C----------RGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       354 ---~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                         .          ...+-+-+.. .++++++..++.|+++++
T Consensus       393 ~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        393 YRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             CCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence               0          1224444444 688999999999988774

>PLN02590 probable tyrosine decarboxylase

Probab=99.88  E-value=2.8e-19  Score=170.53  Aligned_cols=336  Identities=14%  Similarity=0.075  Sum_probs=230.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-------CcEEEecChHHHHHHHHHHhccC----
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCDA----  112 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-------~~v~~~~g~t~a~~~~~~~l~~~----  112 (398)
                      .++.++..+..+..+.....|..++...++++.+.+|+.+..+.+.       ..-++++|+|+|+..++.+....    
T Consensus       142 ~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~  221 (539)
T PLN02590        142 SVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK  221 (539)
T ss_pred             cHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh
Confidence            3455555555544554466777788899999999999999998864       24678999999998887765421    


Q ss_pred             ----C--C-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCC-CCCCChHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015890          113 ----G--D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSK-TLHPDADWLEKTLET----KPTPKLVSVVNPGNPS  177 (398)
Q Consensus       113 ----g--d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~d~e~l~~~l~~----~~~~~~v~i~~p~npt  177 (398)
                          +  + .|++++.+|+++..+++.+|+   .++.+ |++.. .+.+|++.|+++|++    +..|-+|+.+..+..|
T Consensus       222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V-p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t  300 (539)
T PLN02590        222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL-KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS  300 (539)
T ss_pred             hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE-eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence                1  1 455678889999999999997   57778 88753 478999999999963    2235677888889999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece--ec-cCCCcccccc--CCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FM-YDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~-~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      |.+-|   +++|+++|++||+|++||.+|  +. ..........  ...+=+..+.||++. ..+.+|.+++++. ..+.
T Consensus       301 GaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~-~~l~  375 (539)
T PLN02590        301 AAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDR-YSLI  375 (539)
T ss_pred             cccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCH-HHHH
Confidence            99999   999999999999999999999  21 1111111111  111234568999996 6678898888862 1233


Q ss_pred             HHHHH---hhc---------------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          253 TQLLK---VQD---------------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       253 ~~l~~---~~~---------------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      +.+..   +..               ....+- .+....+...|+. +.+.+.+++++..++++++.+.+++.+.+++..
T Consensus       376 ~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsR-r~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~  454 (539)
T PLN02590        376 DALKTNPEYLEFKVSKKDTVVNYKDWQISLSR-RFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT  454 (539)
T ss_pred             HHhhcCHHHhCCcccccccCCCccccCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence            32211   000               011111 2233333444443 567789999999999999999999888767776


Q ss_pred             CCccEEEEeeCCCCCCC-------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++.-+.+++++.....+       ..++.+++. +.|..........+..++|++++.  +++++++.+++.|.+...++
T Consensus       455 ~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~-~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~  533 (539)
T PLN02590        455 TRYFSLVCFRLAPVDGDEDQCNERNRELLAAVN-STGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF  533 (539)
T ss_pred             CCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence            65466677776432111       235566665 455555444444455689999877  67889999999999988777


Q ss_pred             hcc
Q 015890          385 VKD  387 (398)
Q Consensus       385 ~~~  387 (398)
                      .++
T Consensus       534 ~~~  536 (539)
T PLN02590        534 TRN  536 (539)
T ss_pred             ccc
Confidence            653

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.88  E-value=1.8e-19  Score=166.01  Aligned_cols=290  Identities=23%  Similarity=0.220  Sum_probs=194.0

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEE
Q 015890           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTH  137 (398)
Q Consensus        62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~  137 (398)
                      +.|+..  .....+.+.+.+..+.+.  +.++++++|..|+..++.+++++||+|+++...|.+....+    ...|+++
T Consensus        47 ~~Y~R~--gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v  122 (386)
T PF01053_consen   47 YIYSRY--GNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEV  122 (386)
T ss_dssp             CSBTTT--C-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEE
T ss_pred             cceecc--ccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEE
Confidence            445432  244555555555555553  67888999999999999999999999999999998866544    4579998


Q ss_pred             EEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEeece-eccCCCccc
Q 015890          138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTY-FMYDGRKHC  215 (398)
Q Consensus       138 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~livDe~~-~~~~~~~~~  215 (398)
                      .++ +.      -|++++++++++++  ++|+++.|.||+..+.+   |++|+++|+++| +++++|.++ .++.-   .
T Consensus       123 ~~~-d~------~d~~~l~~~l~~~t--~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~---~  187 (386)
T PF01053_consen  123 TFV-DP------TDLEALEAALRPNT--KLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ---N  187 (386)
T ss_dssp             EEE-ST------TSHHHHHHHHCTTE--EEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----
T ss_pred             EEe-Cc------hhHHHHHhhccccc--eEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee---c
Confidence            887 32      27899999999865  99999999999999999   999999999998 999999988 33211   1


Q ss_pred             cccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890          216 CVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  294 (398)
Q Consensus       216 ~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  294 (398)
                      +...+.++++.|++|.++- ...-.|.++.++. +++.+.+.........+.++...+.+...++.    +.-+.+++.+
T Consensus       188 pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~-~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T----l~~R~~~~~~  262 (386)
T PF01053_consen  188 PLELGADIVVHSATKYLSGHSDVMGGAVVVNGS-SELYDRLREFRRLLGATLSPFDAWLLLRGLRT----LPLRMERQNE  262 (386)
T ss_dssp             GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSH-HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT----HHHHHHHHHH
T ss_pred             cCcCCceEEEeeccccccCCcceeeEEEEECch-hhhhhhhcchhhhcCccchHHHHHHHhcCCCc----HHHHHHHHHH
Confidence            2223455889999999952 2244678876632 46777777666655666777777777777765    6777888889


Q ss_pred             HHHHHHHHhccCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CCCC--
Q 015890          295 NREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGAC--  352 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~~--  352 (398)
                      ++..+.+.|++++.++ |+.|                ..+-.+.+.+..    ..+.+.+++++-.+....   |...  
T Consensus       263 nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~----~~~~~~~f~~~l~l~~~~~SlGg~~SL  338 (386)
T PF01053_consen  263 NAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG----GEEAARRFLDALKLFSIAPSLGGVESL  338 (386)
T ss_dssp             HHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS----HHHHHHHHHHH-SSSEESSS-SSSS-E
T ss_pred             HHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc----chhhhHhHHhhhhhHhhhhhcCCcccc
Confidence            9999999999887643 3332                122356667763    223444455555544211   1110  


Q ss_pred             --------C-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          353 --------G-------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       353 --------~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                              .             .++.||+|++-   |+.+.+++.|.++++
T Consensus       339 i~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  339 ISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE  386 (386)
T ss_dssp             EEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred             cccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence                    0             13679999997   777888888888874

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=1e-19  Score=171.55  Aligned_cols=283  Identities=19%  Similarity=0.192  Sum_probs=185.6

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~  144 (398)
                      ...++++.++++.    |.  +..++++++++|+..++.+++++||+|+++.+.|.+..    ..++..|++++.+ +.+
T Consensus        64 ~~~~le~~lA~l~----g~--~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~  136 (427)
T PRK05994         64 TNAVLEERVAALE----GG--TAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA-DAD  136 (427)
T ss_pred             cHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEE-CCC
Confidence            3455666666654    53  34778888999999999999999999999999998643    3457789998888 432


Q ss_pred             CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEE
Q 015890          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i  223 (398)
                            |++.+++++++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|+++ .++...+   ...+.++
T Consensus       137 ------d~~~l~~ai~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~p---l~~gaDi  202 (427)
T PRK05994        137 ------DPASFERAITPRT--KAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIRP---IEHGADI  202 (427)
T ss_pred             ------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCCc---cccCCcE
Confidence                  7889999998765  99999999999999999   899999999999999999999 4432222   2234558


Q ss_pred             EEcccccccCCCcceeEEEEcc-CCcH---------------H-----HHHHHH----------HhhccCCCCcchHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYP-SEVE---------------G-----FATQLL----------KVQDNIPICASIISQH  272 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~-~~~~---------------~-----~~~~l~----------~~~~~~~~~~~~~~~~  272 (398)
                      ++.|++|.+|.+|-.+|.++.. ..+.               .     +.+.+.          .........+++...+
T Consensus       203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~  282 (427)
T PRK05994        203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF  282 (427)
T ss_pred             EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence            8999999998655445544432 1000               0     111100          0111223345555555


Q ss_pred             HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccC----------------C-ccEEEEeeCCCCCCChHHH
Q 015890          273 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEV  334 (398)
Q Consensus       273 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~  334 (398)
                      .+...|+.    +..+.++..+++..+.+.|+++|.+. +..|                . .+-.+.+++..    ..+.
T Consensus       283 l~~~~l~t----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~----~~~~  354 (427)
T PRK05994        283 LILTGIET----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG----GYEA  354 (427)
T ss_pred             HHHcCccc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC----CHHH
Confidence            55555544    67777888888888999998877632 2221                1 13345555542    2233


Q ss_pred             HHHHHHhcCeEE---ecCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          335 VRWLAHRHGVVV---IPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       335 ~~~ll~~~gi~v---~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..+++++-.+..   .-|...                      + .++.||+|++-   |+.+.+++.|.+++.+
T Consensus       355 ~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~dl~~Al~~  426 (427)
T PRK05994        355 GVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI---EDVDDIIADLEQALAK  426 (427)
T ss_pred             HHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhh
Confidence            444544444332   112111                      0 13579999997   6677788888888763

>PRK06149 hypothetical protein; Provisional

Probab=99.87  E-value=1.9e-19  Score=185.48  Aligned_cols=344  Identities=13%  Similarity=0.044  Sum_probs=220.5

Q ss_pred             HcCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      .+|+.|+||..|...++ .+|++.+++.+++.......    ....+....+++.+....+-..+.+++++||++|++.+
T Consensus       582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~----~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~A  657 (972)
T PRK06149        582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS----RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLA  657 (972)
T ss_pred             CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc----cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence            35889999998776566 78999999999987532211    11123445566666554433346899999999999999


Q ss_pred             HHHhc--cCCCEEEEeCCCCcChhhHHHhc-C-----c--------EEEEeccCCC-CC--CC-CC-----hHHHHHhhc
Q 015890          106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-----V--------THILVGPCSS-KT--LH-PD-----ADWLEKTLE  160 (398)
Q Consensus       106 ~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~-~~--~~-~d-----~e~l~~~l~  160 (398)
                      ++...  ....+|+....+|++....+-.. +     .        .+..+ +.+. ..  +. .+     .+++++.++
T Consensus       658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l~  736 (972)
T PRK06149        658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPV-ESPNTYRGRFRGADSAADYVRDVVAQLE  736 (972)
T ss_pred             HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEe-CCCcccCCcCCCcccHHHHHHHHHHHHH
Confidence            99543  22368999999999866332111 0     0        01112 1111 00  11 11     234444332


Q ss_pred             ----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEccccccc
Q 015890          161 ----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       161 ----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~sK~~  232 (398)
                          ....+++|+++..+...|. ..+++.++++.++|++||+++|+||++  |+..|... .....+....+.+++|.+
T Consensus       737 ~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~l  816 (972)
T PRK06149        737 ELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGM  816 (972)
T ss_pred             HHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccc
Confidence                2334688888866666665 567889999999999999999999999  65555422 111111122233889999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHh-hccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      | .|+++|+++++   +++.+.+... ....+++.|+.+.+++.+.|+..+  +..++..+.-...++.|.+..++.+.+
T Consensus       817 g-~G~Pl~av~~~---~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i  892 (972)
T PRK06149        817 G-NGHPLGAVITR---REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLI  892 (972)
T ss_pred             c-CCeeeEEEEEc---HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            8 88999999999   7887776531 112356788999999999887522  233333344444555666555556655


Q ss_pred             ccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ..+... |.++.+.+....       .....++..++ ++||++.+...  ..+.+||.... .+++++++++++|.+++
T Consensus       893 ~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~~l  968 (972)
T PRK06149        893 GAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDRVL  968 (972)
T ss_pred             EEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence            555566 677777663211       01234666665 78999987521  13679998775 79999999999999998


Q ss_pred             HH
Q 015890          382 EE  383 (398)
Q Consensus       382 ~~  383 (398)
                      .+
T Consensus       969 ~~  970 (972)
T PRK06149        969 TE  970 (972)
T ss_pred             Hh
Confidence            65

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.87  E-value=2.5e-19  Score=169.54  Aligned_cols=342  Identities=13%  Similarity=0.081  Sum_probs=209.0

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHH--HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCcEEEecChHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAME--KVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQA  101 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~--a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~v~~~~g~t~a  101 (398)
                      +|+.|+||..|.  ..++ .+|++.+  ++.+++.+-............+....+++.+.+.. +...+.|++++||++|
T Consensus        43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA  122 (443)
T PRK08297         43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA  122 (443)
T ss_pred             CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence            688999998764  3333 5899999  99988864210000010111233344555554443 2224689999999999


Q ss_pred             HHHHHHHhc----------c---C-CCEEEEeCCCCcChhhHHHhcC-cEEE---Eec-------cCCCC-----CCC--
Q 015890          102 FVNIVLTLC----------D---A-GDSVVMFAPYYFNSYMSFQMTG-VTHI---LVG-------PCSSK-----TLH--  149 (398)
Q Consensus       102 ~~~~~~~l~----------~---~-gd~Vl~~~p~~~~~~~~~~~~g-~~~~---~~~-------~~~~~-----~~~--  149 (398)
                      ++.+++...          .   + ..+|+....+|++....+-... ....   ...       +.+..     +..  
T Consensus       123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (443)
T PRK08297        123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE  202 (443)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence            999999873          1   1 2579999999999765443322 1100   000       00000     000  


Q ss_pred             -------CChHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc
Q 015890          150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE  218 (398)
Q Consensus       150 -------~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~  218 (398)
                             -+++.+++.+. ....+++|+++..+...|.+ .|++.+++|.++|++||+++|.||++  |+..|.......
T Consensus       203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~  282 (443)
T PRK08297        203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ  282 (443)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence                   02345566665 22337889998777777774 78889999999999999999999999  666654322111


Q ss_pred             CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH-----HhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHH
Q 015890          219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL-----KVQDNIPICASIISQHLALYSLQT--GPEWVTERVKD  291 (398)
Q Consensus       219 ~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~  291 (398)
                      .+....+.+++|.++     +|.++..   +++.+...     ......+++.++.+.+++.+.|+.  .++.+++..+.
T Consensus       283 ~gv~PDiv~~gK~l~-----~~a~l~~---~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~  354 (443)
T PRK08297        283 LGVRPDIVAFGKKTQ-----VCGIMAG---RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ  354 (443)
T ss_pred             cCCCCCEEEeccccc-----ccceecc---hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            111122336789874     2344444   23222111     112345677888999888888874  22334444444


Q ss_pred             HHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          292 LVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      ....++.+.+..++.+.+. .+.+. |.++.+.++.. .....++..++ ++||++.++.    ...+|++++. .++++
T Consensus       355 g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gvl~~~~~----~~~lr~~P~l~~t~~e  427 (443)
T PRK08297        355 GEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTT-ADRDEVIRRLW-EEGVLVLPCG----ERSIRFRPALTVTTEE  427 (443)
T ss_pred             HHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCH-HHHHHHHHHHH-HCCEEEecCC----CCeEEEECCccCCHHH
Confidence            4555555655555555432 33455 67777777532 12346677665 8999998752    3579997666 79999


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLEEL  384 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~  384 (398)
                      +++++++|.+++.++
T Consensus       428 id~~l~~l~~~l~~~  442 (443)
T PRK08297        428 IDAAIDALRRALPEV  442 (443)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999998765

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.86  E-value=5.4e-19  Score=164.17  Aligned_cols=304  Identities=22%  Similarity=0.278  Sum_probs=206.9

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCc
Q 015890           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYF  124 (398)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~  124 (398)
                      .+.++++.+.+.+++...+  .....++++.++++++      .+.++.++++|.|+.+++.++ +++||+|+++..++.
T Consensus         5 ~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~   76 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFG------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP   76 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHT------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred             HHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhC------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence            5667777777776543322  4555788888888884      578999999999999999998 488999999999999


Q ss_pred             ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890          125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN  204 (398)
Q Consensus       125 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe  204 (398)
                      .....+...|++++++ +++++.+.+|++.+++++++++  ++|++.+   ..|...+   +.+|.++|+++|+++|.|.
T Consensus        77 ~~~~ai~~~G~~pv~~-Di~~~~~~id~~~~~~~i~~~t--~ai~~~h---~~G~~~d---~~~i~~~~~~~~i~lIeD~  147 (363)
T PF01041_consen   77 ATASAILWAGAEPVFV-DIDPETLNIDPEALEKAITPKT--KAILVVH---LFGNPAD---MDAIRAIARKHGIPLIEDA  147 (363)
T ss_dssp             HHHHHHHHTT-EEEEE--BETTTSSB-HHHHHHHHHTTE--EEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-
T ss_pred             HHHHHHHHhccEEEEE-eccCCcCCcCHHHHHHHhccCc--cEEEEec---CCCCccc---HHHHHHHHHHcCCcEEEcc
Confidence            9999999999999999 9998889999999999999887  9998775   4566666   9999999999999999999


Q ss_pred             ce-e--ccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------C
Q 015890          205 TY-F--MYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-----------------I  262 (398)
Q Consensus       205 ~~-~--~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-----------------~  262 (398)
                      ++ +  .+.|...... ++  +.++||  +|.++  .-..|++++++  +++.+++..++..                 .
T Consensus       148 a~a~g~~~~g~~~G~~-gd--~~~fSf~~~K~i~--~geGG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  220 (363)
T PF01041_consen  148 AQAFGARYKGRPVGSF-GD--IAIFSFHPTKIIT--TGEGGAVVTND--PELAERARALRNHGRSRDAFRRYRHELPPGY  220 (363)
T ss_dssp             TTTTT-EETTEETTSS-SS--EEEEESSTTSSS---SSS-EEEEEST--HHHHHHHHHHTBTTEETSECSTTEESSSS--
T ss_pred             ccccCceeCCEeccCC-CC--ceEecCCCCCCCc--CCCCeeEEecH--HHHHHHhhhhhccCcCccccccccccccCCc
Confidence            99 4  3344333322 33  445555  68884  22358888887  7888887765431                 2


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc----E-EEEeeCCCCC-CChHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----I-YLWARLPEKH-LDDFEVV  335 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~----~-~~~~~~~~~~-~~~~~~~  335 (398)
                      .+.++.+..+.+...|+.    +++..+.-+++.+.+.+.|.+.+.+.... +.+.    + .+.+.++... .+..++.
T Consensus       221 n~rm~~~~AAigl~QL~~----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~  296 (363)
T PF01041_consen  221 NFRMSELQAAIGLAQLKR----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELV  296 (363)
T ss_dssp             B-B-BHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHH
T ss_pred             ccccHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHH
Confidence            234555555555666654    56666667778888889998887643322 2211    1 2344444321 2466777


Q ss_pred             HHHHHhcCeEEecCCC-C-C------C----------------CCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGA-C-G------C----------------RGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~-~-~------~----------------~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      +.| ++.||.+.+... + .      .                ...+-+-+.. .++++++..++.|+
T Consensus       297 ~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  297 EAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             HHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             HHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence            776 588999987662 1 0      0                1246666555 78888888887764

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.86  E-value=1.2e-19  Score=170.80  Aligned_cols=338  Identities=9%  Similarity=0.001  Sum_probs=204.1

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHh-hcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKEL-VWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~-~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      .+|+.|+||..|..  .++ .+|.+.+|+.++ .....  ...+ ......++.+.+.+.+.+..+.+.+.+++++|+++
T Consensus        55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE  133 (464)
T TIGR00699        55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD  133 (464)
T ss_pred             CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence            46889999998753  333 689999999974 22211  1112 11112223333333222333323468999999999


Q ss_pred             HHHHHHHHhcc--------------------------CC---CEEEEeCCCCcChhhHHHhc-CcE-----------EEE
Q 015890          101 AFVNIVLTLCD--------------------------AG---DSVVMFAPYYFNSYMSFQMT-GVT-----------HIL  139 (398)
Q Consensus       101 a~~~~~~~l~~--------------------------~g---d~Vl~~~p~~~~~~~~~~~~-g~~-----------~~~  139 (398)
                      |++.+++....                          +|   .+|+....+|++....+-.. |..           ...
T Consensus       134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~  213 (464)
T TIGR00699       134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ  213 (464)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence            99999997631                          11   27999999999876544322 111           111


Q ss_pred             eccCCCC--CC-----------CCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEee
Q 015890          140 VGPCSSK--TL-----------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDN  204 (398)
Q Consensus       140 ~~~~~~~--~~-----------~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe  204 (398)
                      + |.+..  .+           .-+++.+++.++. ...+++|+++..+...|.+. +++.++++.++|++||+++|+||
T Consensus       214 ~-p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE  292 (464)
T TIGR00699       214 A-PFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE  292 (464)
T ss_pred             c-CCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence            1 11110  00           0135667777752 23378999997777788865 78899999999999999999999


Q ss_pred             ce--eccCCCccccccCCcE--EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC
Q 015890          205 TY--FMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT  280 (398)
Q Consensus       205 ~~--~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  280 (398)
                      ++  |+..|........+..  ..+.+++|.+|..|    +++..   + .+..........+++.++.+.+++.+.|+.
T Consensus       293 V~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG----~~~~~---~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~  364 (464)
T TIGR00699       293 VQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAG----YFFHD---P-AFRPNKPYRQFNTWMGDPSRALILREIIQE  364 (464)
T ss_pred             eeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCC----ccccc---h-hccCCCCcccccCCCCCHHHHHHHHHHHHH
Confidence            99  6554532222111111  22457789995234    33333   2 211111222345677888888888888765


Q ss_pred             C--chHHHHHHHHHHHHHHHHHHHhccCC-CCcccc--CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCC
Q 015890          281 G--PEWVTERVKDLVRNREIIREALSPLG-EGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR  355 (398)
Q Consensus       281 ~--~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~  355 (398)
                      .  ++.+.+..+.-...++.+.+..++++ .+..+.  +. +.++.+.++.. .....+...++ ++|+++.+.    ..
T Consensus       365 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~gie~~~~-~~~~~i~~~~~-~~Gvl~~~~----g~  437 (464)
T TIGR00699       365 IKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIAWDTPDE-AKRDKLLKKAR-NNGVNIGGC----GV  437 (464)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEEEecCCH-HHHHHHHHHHH-HCCcEEecC----CC
Confidence            2  23333333334444555555444555 333333  44 77777777532 12345666665 789999764    34


Q ss_pred             CeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          356 GHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       356 ~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.|||.+.. .+++|+++++++|.+++
T Consensus       438 ~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       438 KAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             CeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            789999887 79999999999998763

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.86  E-value=4.8e-19  Score=165.02  Aligned_cols=302  Identities=17%  Similarity=0.118  Sum_probs=199.9

Q ss_pred             cHHHHHHHHHHHhhhcCCCC-CcEEEecChH-HHHHHHHHHhcc---CCCEEEEeCCCCcChhhHHHhcCcEEEEecc--
Q 015890           70 LPELRDALVKKLNQENKLYK-SSVMVTAGAN-QAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--  142 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t-~a~~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~--  142 (398)
                      ...+.+.+.+.+.+..|++. +..++++|+| .++.+++.++..   +||.|+++..+|.+...++...|++++.+ +  
T Consensus       103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~V-d~~  181 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVI-ETV  181 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEe-eee
Confidence            45666677777777778753 4588888888 588877777652   58999999999999999999999999999 6  


Q ss_pred             CCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCC-cc--ccc
Q 015890          143 CSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGR-KH--CCV  217 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~-~~--~~~  217 (398)
                      .+++++.+|++.|++++++.+ +..++++.+|+  |+.....+++++|+++|++||+++|+|++| +..... ..  ...
T Consensus       182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~  259 (444)
T TIGR03531       182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAI  259 (444)
T ss_pred             ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccc
Confidence            456778999999999998533 24566665554  333333444999999999999999999999 322110 00  111


Q ss_pred             cC-CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890          218 EG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  296 (398)
Q Consensus       218 ~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  296 (398)
                      .. ..++++.|++|.+.++|. .|.++.++  +++++.+.....  ....+.+.+.+...++..+.+.++++.++..+++
T Consensus       260 ~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d--~el~~~i~~~y~--g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a  334 (444)
T TIGR03531       260 KVGRVDAVVSSTDKNFMVPVG-GAIIYSFD--ENFIQEISKSYP--GRASASPSLDVLITLLSLGSKGYLELLKERKEMY  334 (444)
T ss_pred             cccCCCeEEEeCccCCCCCCC-EEEEEECC--HHHHHHHHHhcc--CCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            11 125778899999987765 34454655  788887765433  2234456777777777767788888888888888


Q ss_pred             HHHHHHhccC----CCCcccc-CCccEEEEeeCCCC-CCChHHHHHHHHHhcCeE----EecCC-------CC---CC--
Q 015890          297 EIIREALSPL----GEGAVKG-GEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV----VIPGG-------AC---GC--  354 (398)
Q Consensus       297 ~~l~~~l~~~----~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~----v~~g~-------~~---~~--  354 (398)
                      +.+.+.|+++    +. ++.. +.+..-+.+.+... ..+...+-..| -.++|.    |.++.       .|   +.  
T Consensus       335 ~~l~~~L~~l~~~~~~-~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l-~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~  412 (444)
T TIGR03531       335 KYLKELLQKLAERHGE-RLLDTPENPISSAMTLSTLKGKDPTMLGSML-YSRRVTGPRVVTNGDSKTVGGCEFKGYGSHT  412 (444)
T ss_pred             HHHHHHHHHHHHhhCc-EeecCCCCceeEEEecccccccCHHHHHHHH-HhCCCCCceeecCCCceEECCEEeecccccc
Confidence            8888877753    33 4443 33334444444321 11344444444 355552    23443       12   11  


Q ss_pred             ----CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          355 ----RGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       355 ----~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                          ..++-++.+- .+.+|++.++++|.+++
T Consensus       413 ~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       413 SNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             cCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence                1244444333 68999999999998763

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.86  E-value=3.1e-19  Score=167.64  Aligned_cols=282  Identities=16%  Similarity=0.138  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~  146 (398)
                      ..+++.++++.    |.  +..++++++++|+.+++.+++++||+|+++...|.+..    ..++..|++++++ + +. 
T Consensus        72 ~~le~~la~l~----g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-~~-  142 (437)
T PRK05613         72 EALENRIASLE----GG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFV-E-NP-  142 (437)
T ss_pred             HHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEE-C-CC-
Confidence            44555555544    54  34555555668998989888999999999999998763    4457789999988 5 22 


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                         .|++.+++.+++++  ++|++.++.||+|.+.|   +++|+++|+++|+++|+|.++ .+..-   .....+.++++
T Consensus       143 ---~d~e~l~~~l~~~t--k~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~---~p~~~GaDivv  211 (437)
T PRK05613        143 ---DDPESWQAAVQPNT--KAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALV---RPLELGADVVV  211 (437)
T ss_pred             ---CCHHHHHHhCCccC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccccc---ChHHhCCCEEE
Confidence               17899999998775  89999999999999999   999999999999999999998 43211   11122346889


Q ss_pred             cccccccCCCcceeE-EEEccCCc--------------------------------HHHH-HHHHHhhccCCCCcchHHH
Q 015890          226 FSFSKAYGMMGWRVG-YIAYPSEV--------------------------------EGFA-TQLLKVQDNIPICASIISQ  271 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G-~i~~~~~~--------------------------------~~~~-~~l~~~~~~~~~~~~~~~~  271 (398)
                      .|++|.++..|--+| .++.+...                                +.+. +...........+.++...
T Consensus       212 ~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a  291 (437)
T PRK05613        212 ASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNA  291 (437)
T ss_pred             eeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence            999999975554444 44433110                                0000 1111222334556677777


Q ss_pred             HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccC----------------C-ccEEEEeeCCCCCCChHH
Q 015890          272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG----------------E-GAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~----------------~-~~~~~~~~~~~~~~~~~~  333 (398)
                      +.+...|+.    +.-+.++..+++..+.+.|+++|.+ +|..|                . .|-.+.+.+..    +.+
T Consensus       292 ~l~~rgl~T----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~----~~~  363 (437)
T PRK05613        292 WVTAQGLDT----LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKG----GKD  363 (437)
T ss_pred             HHHHcccCc----HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecC----CHH
Confidence            666666654    6777788889999999999988763 22211                1 13345556642    223


Q ss_pred             HHHHHHHhcCeEEec---CCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIP---GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~---g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ...+++++-.+....   |...                      + .++.||+|++-   |+.+.+++.|.+++++
T Consensus       364 ~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dLi~Dl~~Al~~  436 (437)
T PRK05613        364 EAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI---EDIDDIIADLEGGFAA  436 (437)
T ss_pred             HHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence            333444444443221   1100                      0 13579999997   6777888888888764

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.86  E-value=2.8e-18  Score=157.71  Aligned_cols=321  Identities=13%  Similarity=0.094  Sum_probs=217.1

Q ss_pred             HHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCc
Q 015890           46 KMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF  124 (398)
Q Consensus        46 ~~v~~a-~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~  124 (398)
                      +.+.++ +...+..+  -.|..++...++++.+++++    |  .+.++.++++|.|++.+....+++||.|  +.+.|+
T Consensus        50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~----G--~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f  119 (450)
T TIGR02618        50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELY----G--FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYF  119 (450)
T ss_pred             HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHH----C--CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeH
Confidence            566665 55444332  24888888899999999998    3  4579999999999998877778999977  677775


Q ss_pred             ChhhH-HHhcCcEEEEeccCC---------CCCCCCChHHHHHhhccCC--CCeEEEEeCCCCC-CccCCCHHHHHHHHH
Q 015890          125 NSYMS-FQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVVNPGNP-SGTYIPERLLKRISD  191 (398)
Q Consensus       125 ~~~~~-~~~~g~~~~~~~~~~---------~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~np-tG~~~~~~~l~~i~~  191 (398)
                      ..... ....|...+-+ +.+         +..+.+|++.|++.+++..  ..++|++++++|. .|..++.++++++.+
T Consensus       120 ~Tt~ahIe~~Gav~vDi-~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~e  198 (450)
T TIGR02618       120 TTTRYHQEKNGATFVDI-IIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRE  198 (450)
T ss_pred             HHHHHHHHhCCeEEEee-ecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHH
Confidence            54443 67788865555 333         3346789999999998532  2357788877775 489999999999999


Q ss_pred             HHHHcCCEEEEeece-ec-----------cCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          192 LCKAAGSWLVVDNTY-FM-----------YDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~-----------~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      +|++||+.+|.|.++ +.           +.+.+...    .....+.++.|..|.++.+-  .|+++.++  +++++++
T Consensus       199 lA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d--~~l~~k~  274 (450)
T TIGR02618       199 LCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI--GGFLCMND--DEMFQSA  274 (450)
T ss_pred             HHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC--ceEEEeCC--HHHHHHH
Confidence            999999999999999 41           11111100    00112357889999887551  27777676  8888888


Q ss_pred             HHhhccC----CC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---
Q 015890          256 LKVQDNI----PI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---  327 (398)
Q Consensus       256 ~~~~~~~----~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---  327 (398)
                      +......    ++ ..+...+.+++..|++..  -+.+.++-....++|.+.|.+.|. .+..|.+++.++++..+.   
T Consensus       275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~--~~~y~~~r~~~a~~La~~L~~~Gv-pv~~p~ggh~V~vda~~~lph  351 (450)
T TIGR02618       275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREAV--DYEYIEHRVKQVRYLGDKLKAAGV-PIVEPVGGHAVFLDARRFLPH  351 (450)
T ss_pred             HHHhhhcCCccccCchhhhhHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCcceEEEEhHHhCCC
Confidence            7764322    11 223334455555555411  123333444457778888877755 556677788888865321   


Q ss_pred             ----CCChHHHHHHHHHhcCeEEecCCCC--CC-----------CCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          328 ----HLDDFEVVRWLAHRHGVVVIPGGAC--GC-----------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       328 ----~~~~~~~~~~ll~~~gi~v~~g~~~--~~-----------~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                          .-....+..+|-.+.||.-.--..+  +.           -..+|+++.+  -|.++++...+++....++-
T Consensus       352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  427 (450)
T TIGR02618       352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR  427 (450)
T ss_pred             CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence                1135567777777889876443322  11           1479999888  58889999999998887663

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.86  E-value=1e-18  Score=158.81  Aligned_cols=281  Identities=25%  Similarity=0.233  Sum_probs=191.0

Q ss_pred             HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCC
Q 015890           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTL  148 (398)
Q Consensus        73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~  148 (398)
                      .++.+.+.+..+.|  .+..+.+++|.+|+..++.+++++||+|+++...|.+..    ..++.+|+++.++ +..    
T Consensus        64 T~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~-d~~----  136 (396)
T COG0626          64 TRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV-DPG----  136 (396)
T ss_pred             cHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE-CCC----
Confidence            33444444433333  567888999999999999999999999999999997754    3457788999887 221    


Q ss_pred             CCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890          149 HPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       149 ~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~  226 (398)
                        +.+.+++++. +++  ++|++++|+||+..+.+   |.+|+++|+++|+++|+|+++ -++ -..  +...+.+|++.
T Consensus       137 --~~~~~~~~~~~~~t--k~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~-~q~--PL~~GaDIVvh  206 (396)
T COG0626         137 --DDEALEAAIKEPNT--KLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPV-LQR--PLELGADIVVH  206 (396)
T ss_pred             --ChHHHHHHhcccCc--eEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccc-ccC--hhhcCCCEEEE
Confidence              4456666666 455  99999999999999999   999999999999999999999 222 111  12223559999


Q ss_pred             ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890          227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      |.+|.++- .-.=.|.+++++  +++.+.+..... ......++...+.+...++.    +.-+.+++.+++..+.+.|+
T Consensus       207 SaTKyl~GHsDvl~G~v~~~~--~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~nA~~IA~~L~  280 (396)
T COG0626         207 SATKYLGGHSDVLGGVVLTPN--EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----LALRMERHNENALKIAEFLA  280 (396)
T ss_pred             eccccccCCcceeeeEEecCh--HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHh
Confidence            99999962 224467666664  556665533322 24555666666666666654    67777888889999999999


Q ss_pred             cCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC----------C-
Q 015890          305 PLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----------G-  353 (398)
Q Consensus       305 ~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----------~-  353 (398)
                      +.+.+ +|+.|.                .+-.+.+.+..+     +.+.+++++-.+..   .-|...          + 
T Consensus       281 ~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-----~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~  355 (396)
T COG0626         281 DHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHA  355 (396)
T ss_pred             cCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-----HHHHHHHHhCCccEEeccCCCcccccccccccCcc
Confidence            87763 344432                244455666532     33333443334333   222111          0 


Q ss_pred             ------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                  .++-||+|++-   |+.+.+++.|.+++..+
T Consensus       356 ~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~  395 (396)
T COG0626         356 SIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA  395 (396)
T ss_pred             cCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence                        14689999997   77777888888887754

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.85  E-value=7.9e-19  Score=162.39  Aligned_cols=316  Identities=12%  Similarity=0.055  Sum_probs=203.6

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEe-cChHHHHHHHHHHhccCCCEEEE
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVT-AGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~-~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      |...||++++++....... ....+.+..+.++.+...+.+.+++++++ .+|+++ +|+|.+++.++.+++.+ +.+.+
T Consensus        11 P~~~~~~v~~a~~~~~~~~-~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i   88 (361)
T TIGR01366        11 PSKVRLEQLQALTTTAASL-FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL   88 (361)
T ss_pred             CcCCCHHHHHHHHhcCccc-cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence            6668899999987542110 10112334445565566666666667754 478876 66999999999999743 33333


Q ss_pred             eCCCCc-ChhhHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890          119 FAPYYF-NSYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       119 ~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~  195 (398)
                      ....|. .+.+.++..  +.++..+ +.+. +..++.     .++++  +++|++++..|.||+..|   +++|   +++
T Consensus        89 ~~G~~~~~~~~~a~~~~~~~~~~~~-~~~~-~~~~~~-----~~~~~--~~lV~~~h~et~tG~~~p---i~~I---~~~  153 (361)
T TIGR01366        89 SFGEFSSKFAKAVKLAPWLGEPIIV-TADP-GSAPEP-----QADPG--VDVIAWAHNETSTGVAVP---VRRP---EGS  153 (361)
T ss_pred             ecCHHHHHHHHHHHhhhccCCceEE-ecCC-CCCCCC-----ccCCC--CCEEEEcccCCccceecc---cccc---ccc
Confidence            344442 244444442  2255555 4432 222332     23343  599999999999999999   5555   478


Q ss_pred             cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890          196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------------  259 (398)
Q Consensus       196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---------------  259 (398)
                      +|+++++|.++ ++.......  .  .+++++|.+|++|++| .++.++.+   +++++++....               
T Consensus       154 ~g~~~iVDavqs~g~~~idv~--~--~D~~~~s~~K~lg~~~-Gl~~~~~s---~~~~~~~~~~~~~~~~~p~~~d~~~~  225 (361)
T TIGR01366       154 DDALVVIDATSGAGGLPVDIA--E--TDVYYFAPQKNFASDG-GLWLAIMS---PAALERIEAIAASGRWVPEFLSLPTA  225 (361)
T ss_pred             CCCeEEEEcCccccCCCCCHH--H--CCEEEEEchhhcCCCC-ceEEEEEC---HHHHhhhhcccCCCCCCchhhhHHHH
Confidence            99999999999 666443332  1  3478899999998764 24555666   55555543210               


Q ss_pred             ------ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCcccc-CC---ccEEEEeeCCCC
Q 015890          260 ------DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG-GE---GAIYLWARLPEK  327 (398)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~---~~~~~~~~~~~~  327 (398)
                            ..++++++.....++.++++... . .++...++++++.+++++.+.+.+..+.+. ..   ......+.++++
T Consensus       226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g  305 (361)
T TIGR01366       226 VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDD  305 (361)
T ss_pred             HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCc
Confidence                  12345566665656666766422 2 256777888899999999999888644442 11   122234555543


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                       .+..++...| +++||.+.++......+.+|+|+.. .+.+|+++++++|++++++
T Consensus       306 -~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~  360 (361)
T TIGR01366       306 -IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER  360 (361)
T ss_pred             -cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence             4677788877 5789999876533335789999988 8999999999999998765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.85  E-value=1.1e-18  Score=153.71  Aligned_cols=340  Identities=15%  Similarity=0.107  Sum_probs=218.8

Q ss_pred             HcCCCeEEcCCccC--CC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      .+|+.|+||..+--  .. ...|++.+++.+++.+-.  ...|...+ .-++.+.+.+.+.   ....+.|.+++++|+|
T Consensus        53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~---~~~~~rvff~nsGTeA  128 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLG---KGSAERVFFCNSGTEA  128 (433)
T ss_pred             CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhccc---CCCccEEEEecCCcHH
Confidence            47899999987542  22 148999999999987632  22232222 3334444444432   2367899999999999


Q ss_pred             HHHHHHHhccC------C--CEEEEeCCCCcChhhHH-HhcCcEEEEeccC----CCCC--CCCChHHHHHhhccCC-CC
Q 015890          102 FVNIVLTLCDA------G--DSVVMFAPYYFNSYMSF-QMTGVTHILVGPC----SSKT--LHPDADWLEKTLETKP-TP  165 (398)
Q Consensus       102 ~~~~~~~l~~~------g--d~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~----~~~~--~~~d~e~l~~~l~~~~-~~  165 (398)
                      ++.++....+.      -  .+++....+|++-...+ ...+...... |.    ++..  ..-|.+++++.++.++ .+
T Consensus       129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~-~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~I  207 (433)
T KOG1401|consen  129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL-PFDPIAPDVVTAEYNDSTALEKLFESHKGEI  207 (433)
T ss_pred             HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC-CCCCCCCceeecccCCHHHHHHHHHhCCCce
Confidence            99999986531      1  24999999998754333 2223222211 11    1110  1127899999998443 58


Q ss_pred             eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEE
Q 015890          166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  242 (398)
Q Consensus       166 ~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i  242 (398)
                      .+|+++..+...|.+ .++|.+..|.++|+++|+++|.||++  |+..|......-.+-...+.++.|.++ .|+++|+.
T Consensus       208 aAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~-gGlPigA~  286 (433)
T KOG1401|consen  208 AAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLG-GGLPIGAT  286 (433)
T ss_pred             EEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhcc-CCceeEEE
Confidence            899999888888886 57888999999999999999999999  666554322211112233558899998 88999999


Q ss_pred             EccCCcHHHHHHHHHhhc---cCCCCcchHHHHHHHHHhcC-C-chHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCc
Q 015890          243 AYPSEVEGFATQLLKVQD---NIPICASIISQHLALYSLQT-G-PEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG  316 (398)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~  316 (398)
                      +++   +++.+.+.....   ..+++.++.+..++...++. . .++..+..+.....++.+.+.+.+.+....- ... 
T Consensus       287 ~v~---~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~gr-  362 (433)
T KOG1401|consen  287 GVR---DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGR-  362 (433)
T ss_pred             eeh---HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeee-
Confidence            999   688888865444   77888999999999999986 2 3566777777788888899988876651111 122 


Q ss_pred             cEEEEeeCCCC---CCChHHH----HHHHH---HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          317 AIYLWARLPEK---HLDDFEV----VRWLA---HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       317 ~~~~~~~~~~~---~~~~~~~----~~~ll---~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ++++.+.+...   ..+....    ...+.   .+.|++++|-.        -+++. .++|.++++++++.+.+.++.
T Consensus       363 gl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~-~~~E~i~~~l~i~~~~l~~~~  432 (433)
T KOG1401|consen  363 GLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVE-HTPEVIQRLLTILEKVLSALN  432 (433)
T ss_pred             EEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccc--------ccccc-CcHHHHHHHHHHHHHHHHHhc
Confidence            34333333211   1111111    11111   12244444410        01122 357889999999999888764

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.85  E-value=8.6e-19  Score=153.22  Aligned_cols=337  Identities=15%  Similarity=0.134  Sum_probs=225.2

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      ++|+.|+|+-.|..  .++ .+|++.+++.+++..-  ....| ..+...++.+.|.+.+    .-+-+.++|++|+++|
T Consensus        47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~-~~~pi~~~Ae~L~s~~----P~~l~~vfF~nsGsEA  121 (442)
T KOG1404|consen   47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGY-LNPPIHDLAEALVSKL----PGDLKVVFFVNSGSEA  121 (442)
T ss_pred             CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccc-cCCcHHHHHHHHHHhC----CCCceEEEEecCCchH
Confidence            46888999988763  222 6899999999988541  12334 3333445555555554    5455679999999999


Q ss_pred             HHHHHHHhc--cCCCEEEEeCCCCcChhhHH-HhcCcEEEEe-------------ccCCCCC-CCCC---------hHHH
Q 015890          102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSF-QMTGVTHILV-------------GPCSSKT-LHPD---------ADWL  155 (398)
Q Consensus       102 ~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~-------------~~~~~~~-~~~d---------~e~l  155 (398)
                      ++++++...  ...-.|+....+|++..... -..|......             +|.+..+ |.-+         .+++
T Consensus       122 Nelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l  201 (442)
T KOG1404|consen  122 NELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKEL  201 (442)
T ss_pred             HHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHH
Confidence            999998753  23347888888998765433 2222222211             0111101 0001         2445


Q ss_pred             HHhhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccc
Q 015890          156 EKTLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFS  229 (398)
Q Consensus       156 ~~~l~---~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~s  229 (398)
                      ++.+.   ..+ +++.+.+..+.-.|.+ +++-.+++..++|+++|.++|.||++  |+..|.-+.....+.+..+-|++
T Consensus       202 ~d~i~~~~~~~-vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA  280 (442)
T KOG1404|consen  202 EDLILYDGPET-VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA  280 (442)
T ss_pred             HHHHHhcCCCc-eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHH
Confidence            55544   344 6788888888878886 67779999999999999999999999  88888666666677777788999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHH-HHHHHHHHHHhccC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDL-VRNREIIREALSPL  306 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-~~~~~~l~~~l~~~  306 (398)
                      |.+| .|+++|.+++.   +++.+-+.+-. ..++++.++.+.+++.+.|+. .++.+.++.... ....+.+.+...+.
T Consensus       281 KgiG-nG~Pl~AVvtt---~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h  356 (442)
T KOG1404|consen  281 KGIG-NGFPLGAVVTT---PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKH  356 (442)
T ss_pred             hhcc-CCCcceeeecC---HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9998 88999999999   88888776655 667888899999888888875 223344443333 23345555555555


Q ss_pred             CCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                      +.+--+... |+++-+++-+..        .....+.++. +++|+.|--|..++.  .+||+... .|.+|++.+++..
T Consensus       357 ~iIGdVRG~-GLm~GvE~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i~G~--vfriaPPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  357 PIIGDVRGR-GLMLGVELVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGIHGN--VFRIAPPLCITKEDIDFAVEYF  432 (442)
T ss_pred             Cceeecccc-eeEEEEEEecccCCCCCcchHHHHHHHHHH-HHhCeeeecccccce--EEEecCCeeccHHHHHHHHHHH
Confidence            554445566 777766663221        1123445555 599999966554433  99999777 7999997666655

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.84  E-value=3.6e-18  Score=157.79  Aligned_cols=277  Identities=16%  Similarity=0.184  Sum_probs=184.1

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  142 (398)
                      .+...++++.++++.    +  .+..+++++++.|+.+++.+++++||+|+++.+.|.+..    ..+...|++++++ +
T Consensus        63 ~P~~~~lE~~la~le----g--~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv-d  135 (384)
T PRK06434         63 NPTVQAFEEKYAVLE----N--AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI-D  135 (384)
T ss_pred             ChhHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEE-C
Confidence            344455666666654    4  345788888889999999999999999999988775544    5567789999998 6


Q ss_pred             CCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          143 CSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       143 ~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      .++ +.+.         ++.. .+++|++.+|+||++.+.+   +++|+++|++++  +++|.++ .++.+.+..   .+
T Consensus       136 ~~~~~~~~---------l~~~-~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~~~pl~---~g  197 (384)
T PRK06434        136 TDRLNSLD---------FDPS-NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYNQNPLD---LG  197 (384)
T ss_pred             CCChhhee---------ecCC-CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcccCCchh---cC
Confidence            543 2222         2222 2599999999999999988   999999999998  5679998 444333322   23


Q ss_pred             cEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|.+|.++.+| .-.|.++.++  +++.+++...........++...+.+...|+.    +..+.++..+++..+
T Consensus       198 aDivv~S~tK~i~G~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----L~~R~~r~~~~a~~~  271 (384)
T PRK06434        198 ADVVIHSATKYISGHSDVVMGVAGTNN--KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRMEKHNKNGMEL  271 (384)
T ss_pred             CCEEEeecccccCCCCCceEEEEecCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----HHHHHHHHHHHHHHH
Confidence            4588999999996433 4467777765  66777766554334445555554444444443    677788888899999


Q ss_pred             HHHhccCCCC-ccccCC----------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCC-----------C--
Q 015890          300 REALSPLGEG-AVKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGA-----------C--  352 (398)
Q Consensus       300 ~~~l~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~-----------~--  352 (398)
                      .+.|+.+|.+ +|+.|.          .+..+.+.+..     .+.+.+++++-.+..   .-|..           .  
T Consensus       272 a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-----~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~  346 (384)
T PRK06434        272 ARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-----MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSS  346 (384)
T ss_pred             HHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-----HHHHHHHHHhCCcceEccCCCCCCeeeECCCcccccc
Confidence            9999988764 333322          23445556642     233344544444332   11110           0  


Q ss_pred             ---------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          353 ---------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       353 ---------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                               + .++.||+|++-   |+.+.+++.|.+++.
T Consensus       347 ~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~  383 (384)
T PRK06434        347 LSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALS  383 (384)
T ss_pred             CCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence                     0 13579999997   677778888887764

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.84  E-value=2.5e-18  Score=162.60  Aligned_cols=338  Identities=14%  Similarity=0.107  Sum_probs=202.0

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHH--HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAM--EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQA  101 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~--~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a  101 (398)
                      +|+.|+||..|.  ..++ .+|.+.  +++.+++.+.............+....+++.+.+..+ -..+.+++++||++|
T Consensus        36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA  115 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA  115 (431)
T ss_pred             CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence            789999998764  3333 578888  8988887653211111111112233344444444321 123679999999999


Q ss_pred             HHHHHHHhcc--------C------CCEEEEeCCCCcChhhHHHhc-CcE-EE--Eec-------cCC-------CCCCC
Q 015890          102 FVNIVLTLCD--------A------GDSVVMFAPYYFNSYMSFQMT-GVT-HI--LVG-------PCS-------SKTLH  149 (398)
Q Consensus       102 ~~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~~~-g~~-~~--~~~-------~~~-------~~~~~  149 (398)
                      ++.+++....        .      +.+|+....+|++....+-.. |.. ..  ..+       +.+       .....
T Consensus       116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  195 (431)
T TIGR03251       116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD  195 (431)
T ss_pred             HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence            9999997641        1      368999999999876544322 211 00  000       000       00000


Q ss_pred             -------CChHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc
Q 015890          150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE  218 (398)
Q Consensus       150 -------~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~  218 (398)
                             -+++.+++.+. ....+++|+++..+...|.+ .+++.+++|.++|++||+++|+||++  ++..|.......
T Consensus       196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~  275 (431)
T TIGR03251       196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ  275 (431)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence                   12444555664 22337899999777778875 67889999999999999999999999  666553322111


Q ss_pred             C--CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH--HhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHH
Q 015890          219 G--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDL  292 (398)
Q Consensus       219 ~--~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~  292 (398)
                      .  ..+++  +++|.+. .   .|++.... ..++.....  ......+++.++...+++.+.|+..  .+..++..+..
T Consensus       276 ~gv~PDi~--~~gK~~~-~---~g~~~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g  348 (431)
T TIGR03251       276 LGVQPDIV--AFGKKTQ-V---CGIMAGRR-VDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG  348 (431)
T ss_pred             cCCCCCEE--EecccCc-c---ceEEecch-HHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            1  12233  5788762 2   25554331 112222111  1123346677888888888888752  23334555555


Q ss_pred             HHHHHHHHHHhccCC-CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890          293 VRNREIIREALSPLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC  370 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~  370 (398)
                      .+..+.|.+..++.+ .+....+. +.++.+.++.. .....+...++ ++||++.+..    .+.+|++++. .+++|+
T Consensus       349 ~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gvl~~~~g----~~~lr~~P~l~~t~~ei  421 (431)
T TIGR03251       349 AHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPST-ADRDEVIRQLY-REGVLLLGCG----ERSIRFRPPLTVTREEI  421 (431)
T ss_pred             HHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCH-HHHHHHHHHHH-hCCeEEecCC----CCeEEEECCccCCHHHH
Confidence            555666666545555 32233344 66667777532 12345677665 8999997742    3679998887 799999


Q ss_pred             HHHHHHHHH
Q 015890          371 KAAADRLRR  379 (398)
Q Consensus       371 ~~~~~~l~~  379 (398)
                      ++++++|.+
T Consensus       422 d~~l~~l~~  430 (431)
T TIGR03251       422 DAAIDAIRR  430 (431)
T ss_pred             HHHHHHHHh
Confidence            999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PLN02263 serine decarboxylase

Probab=99.84  E-value=5.3e-17  Score=151.11  Aligned_cols=293  Identities=11%  Similarity=0.022  Sum_probs=209.3

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  144 (398)
                      +..++++.+.+|+.++++.+++  .-++|+|||+++..++.+..+  +...|+++..+|++...+++.+|++++.+ |++
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~V-p~d  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKV-DTL  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEe-ccC
Confidence            5688999999999999998653  368899999999999888764  23478889999999999999999999999 887


Q ss_pred             CCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-----EEEEeece----eccC-CCc
Q 015890          145 SKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS-----WLVVDNTY----FMYD-GRK  213 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~-----~livDe~~----~~~~-~~~  213 (398)
                      ++ +.+|++.|++++..++ .|-+|+.+.++.++|.+-|   +++|+++|+++|+     |++||.+|    +++. ..+
T Consensus       209 ~~-g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 VS-GEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             CC-CcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence            54 5899999999997443 2567777788999999999   9999999999997     99999999    2221 111


Q ss_pred             cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCCCcchHHHHHHHHHhcC-CchHH
Q 015890          214 HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPICASIISQHLALYSLQT-GPEWV  285 (398)
Q Consensus       214 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~-~~~~~  285 (398)
                      ........+=+..+.||+++ ..+.+|.++.++   +....+....       .....+-+......+...|.. +.+.+
T Consensus       285 ~~df~~~vDSIsvD~HK~l~-~P~~cgvll~R~---~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~  360 (470)
T PLN02263        285 KVTFKKPIGSVSVSGHKFVG-CPMPCGVQITRM---EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGF  360 (470)
T ss_pred             ccCCCcCccEEEECCccccC-CCcCEEEEEEeh---hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHH
Confidence            11111122334568899986 667899998884   3333332111       111122222223344444443 56778


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890          286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  364 (398)
Q Consensus       286 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-  364 (398)
                      .+..++..++++++.+.|++.+...+..|. .+.+.+.-+.    ...     . .+|..+.+     .++.+++++.. 
T Consensus       361 ~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~-s~~V~f~~p~----~~~-----~-~~gW~L~~-----~~~~~Hivvmph  424 (470)
T PLN02263        361 QKEVQKCLRNAHYLKDRLREAGISAMLNEL-SSTVVFERPK----DEE-----F-VRRWQLAC-----QGNIAHVVVMPS  424 (470)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEEeCCC-ceEEEEecCc----hHH-----h-hcceEEcc-----CCCcEEEEEcCC
Confidence            999999999999999999988774555555 6666655431    111     1 35666655     24568998887 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015890          365 LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .+.+.++++++.|++.......
T Consensus       425 v~~~~id~fi~DL~~~~~~~~~  446 (470)
T PLN02263        425 VTIEKLDYFLKELVEKRSTWYP  446 (470)
T ss_pred             CCHHHHHHHHHHHHHHHhhhhh
Confidence            6889999999999988876543

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.84  E-value=3.2e-17  Score=151.14  Aligned_cols=306  Identities=13%  Similarity=0.088  Sum_probs=206.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEec
Q 015890           63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVG  141 (398)
Q Consensus        63 ~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~  141 (398)
                      .|..++...++++.+++++    |  .+.++.++++|.|+++++...+++||.|  +..+|+..... ....|...+-+ 
T Consensus        73 ~Yagd~s~~~LE~~vAe~l----G--~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi-  143 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY----G--FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDI-  143 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEee-
Confidence            4888888899999999998    4  3569999999999999877778999965  55555544333 56677754433 


Q ss_pred             c---------CCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec
Q 015890          142 P---------CSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM  208 (398)
Q Consensus       142 ~---------~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~  208 (398)
                      .         .++.++.+|++.|++.+++.+  .++++.+..++|.. |...|.++++++.++|++||+.+|.|.++ +.
T Consensus       144 ~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~g  223 (460)
T PRK13237        144 IIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVE  223 (460)
T ss_pred             ecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhc
Confidence            2         123457899999999998542  23467777777877 78888899999999999999999999999 44


Q ss_pred             -----------cCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----CC-Ccch
Q 015890          209 -----------YDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----PI-CASI  268 (398)
Q Consensus       209 -----------~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~----~~-~~~~  268 (398)
                                 |.+.+...    ...-.+.++.|++|.++.+-  .|++++++  +++.++++.....+    ++ +.+.
T Consensus       224 na~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D--~eL~~~~r~~~~~~eG~~tygg~~g  299 (460)
T PRK13237        224 NAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMND--EELFDEAKELVVVYEGMPSYGGMAG  299 (460)
T ss_pred             ChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECC--HHHHHHHHHhccccCCCcCCCChhh
Confidence                       22221110    00112466788999986541  48888887  88999888764322    11 2223


Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC-------CCCChHHHHHHHHHh
Q 015890          269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDDFEVVRWLAHR  341 (398)
Q Consensus       269 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~  341 (398)
                      -.+.+++-.|.+..+  ..+.+..-...++|.+.|.+.|. .+..|.+|.-++++..+       ..-....+..+|-.+
T Consensus       300 rd~~alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~~Gv-pv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~  376 (460)
T PRK13237        300 RDMEAMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLAAGV-PIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIE  376 (460)
T ss_pred             hHHHHHHhHHHhhch--HHHHHHHHHHHHHHHHHHHHCCC-ceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence            344455545543221  14444444556777788877665 55567777777775422       111355677777778


Q ss_pred             cCeEEecCCCC--CC-----------CCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGAC--GC-----------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       342 ~gi~v~~g~~~--~~-----------~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .||...--..+  +.           -..+|+++.+  -|.++++...++|....++-
T Consensus       377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  434 (460)
T PRK13237        377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR  434 (460)
T ss_pred             hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence            89876432222  10           1579999888  58889999999998887663

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.83  E-value=3.3e-18  Score=143.91  Aligned_cols=329  Identities=16%  Similarity=0.110  Sum_probs=213.1

Q ss_pred             CCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        30 ~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      +++++|+.++ -.+..+|++.++-.+++++.....-+  -.-|.+..-+.+...+.++++  .++.++.+++-.|+..++
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f  144 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF  144 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence            5688888765 35568999999999988764321110  112444455555555555444  466677777889999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      .++..|.|.|+..+-.|.+..+..+.+.    .+       .++|+-.++..+.+.  -+.++|+.....+..|.+.|  
T Consensus       145 eail~pedAvfSDeLNhASIIdGirLck----ry-------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP--  211 (417)
T KOG1359|consen  145 EAILTPEDAVFSDELNHASIIDGIRLCK----RY-------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP--  211 (417)
T ss_pred             HHhcChhhhhhccccccchhhhhhHHHh----hh-------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc--
Confidence            9999999999998888877776665543    11       134555566555421  11366776677888999999  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece----eccCCCccccc---cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~----~~~~~~~~~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                       +++|.+++++||.++++||+|    ++..|......   ..+.+++.++++|++|  |...||..++   +.++.-+++
T Consensus       212 -l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp---~~li~llrq  285 (417)
T KOG1359|consen  212 -LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP---KPLISLLRQ  285 (417)
T ss_pred             -HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC---hhHHHHHHh
Confidence             999999999999999999999    33344332221   2456788899999997  4445999999   778777765


Q ss_pred             hhccC--CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          258 VQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       258 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      -...+  +.+.++.....+.++++. .-.-.+.....+.+.+++++..+.-|+ .+.+.. .....+-+.. ..-+....
T Consensus       286 r~RpylFSnslppavV~~a~ka~dl-lm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~-hPI~pv~lGd-a~lA~~~a  361 (417)
T KOG1359|consen  286 RSRPYLFSNSLPPAVVGMAAKAYDL-LMVSSKEIQSRQANTQRFREFMEAAGF-TISGAS-HPICPVMLGD-ARLASKMA  361 (417)
T ss_pred             cCCceeecCCCChhhhhhhHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCC-CCccceeccc-HHHHHHHH
Confidence            43322  222232222222333321 011133444556667778887776665 555432 2222222221 12345667


Q ss_pred             HHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++|| +.||+|...+++.-   .-.||+.++. .+++|++++++++.++.+-+
T Consensus       362 d~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359|consen  362 DELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             HHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence            7887 78999987776532   2368988888 89999999999998877653

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.83  E-value=1.8e-17  Score=165.05  Aligned_cols=339  Identities=13%  Similarity=0.055  Sum_probs=215.8

Q ss_pred             CeEEcCCcc--CCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHH
Q 015890           31 NAVSLAQGV--VYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI  105 (398)
Q Consensus        31 ~~~~l~~g~--~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~  105 (398)
                      .++|+..+-  ..++  .+|++.+|+.+++.+..  .+.......+....+++.|.+..+-+ .+.|+++++|++|++.+
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~A  443 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVA  443 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHH
Confidence            677877653  3333  38999999999987632  22111122345556777665532211 35799999999999999


Q ss_pred             HHHhcc---------------------CCCEEEEeCCCCcChhhHHHhcCcE---------E------EEec-cCC----
Q 015890          106 VLTLCD---------------------AGDSVVMFAPYYFNSYMSFQMTGVT---------H------ILVG-PCS----  144 (398)
Q Consensus       106 ~~~l~~---------------------~gd~Vl~~~p~~~~~~~~~~~~g~~---------~------~~~~-~~~----  144 (398)
                      ++...+                     ...+|+....+|++....+-..+..         .      ..+. |..    
T Consensus       444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~  523 (817)
T PLN02974        444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN  523 (817)
T ss_pred             HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence            987631                     1247999999998855433222210         0      0110 000    


Q ss_pred             -------CCC-----------CC-----CC------------hHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-C
Q 015890          145 -------SKT-----------LH-----PD------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-I  181 (398)
Q Consensus       145 -------~~~-----------~~-----~d------------~e~l~~~l~~------~~~~~~v~i~~p-~nptG~~-~  181 (398)
                             ..+           |.     .+            .+.+++.|+.      ...+++|+++.. ++..|++ +
T Consensus       524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~  603 (817)
T PLN02974        524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI  603 (817)
T ss_pred             ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence                   000           00     00            2456666642      234788888863 6777886 5


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHH-
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-  257 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-  257 (398)
                      +++.++++.++|++||+++|.||++  |+..|........+....+-+++|.++ +| +++|.++++   +++.+.+.. 
T Consensus       604 ~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~Plaa~l~~---~~I~~~f~~~  679 (817)
T PLN02974        604 DPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLVPLAATLAT---EEVFEAFRGP  679 (817)
T ss_pred             CHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCCccEEEEEc---HHHHHhhccc
Confidence            7889999999999999999999999  777776544433333344557889997 78 599999999   788877742 


Q ss_pred             -----hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH----HHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890          258 -----VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR----EIIREALSPLGEGAVKGGEGAIYLWARLPE  326 (398)
Q Consensus       258 -----~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                           +....+++.++.+.+++.+.|+..  .+...+..+...+..    +.+.+.+.+++.+.-+... |.++.+.+.+
T Consensus       680 ~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~~iel~~  758 (817)
T PLN02974        680 SKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVLALELDA  758 (817)
T ss_pred             cccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEEEEEEec
Confidence                 234568889999999999988752  222233333333333    3443445556654445555 6677777743


Q ss_pred             CCC-------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          327 KHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       327 ~~~-------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ...       -...++..++.++||++++.     .+.||+.... .++++++++++.|.+.+
T Consensus       759 ~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        759 EGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             CCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            211       02345555543799999984     3678876555 78999999999998765

>PRK04311 selenocysteine synthase; Provisional

Probab=99.83  E-value=2.3e-17  Score=155.47  Aligned_cols=312  Identities=18%  Similarity=0.115  Sum_probs=197.0

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           44 PPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      .++++++++.+.+.......|...     .....+++.+++++    |.  +..++++++++|+..++.++ .+||+|++
T Consensus        98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----Ga--e~a~vv~sgtaAl~l~l~~l-~~GdeVIv  170 (464)
T PRK04311         98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----GA--EDALVVNNNAAAVLLALNAL-AAGKEVIV  170 (464)
T ss_pred             CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHh-CCCCEEEE
Confidence            689999999988765432222211     11134455555544    54  35778888889999888664 78999999


Q ss_pred             eCCCCcC------hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC--Cc--cCCCHHHHHH
Q 015890          119 FAPYYFN------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP--SG--TYIPERLLKR  188 (398)
Q Consensus       119 ~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np--tG--~~~~~~~l~~  188 (398)
                      +...+..      +...++..|++++.+ +...   ..+++++++++++++  ++|++.+++|+  +|  ...+   +++
T Consensus       171 s~~e~~~~ggs~~i~~~~~~~G~~l~~v-~~~~---~t~~~dle~aI~~~T--klV~~vh~sN~~i~G~~~~~d---l~e  241 (464)
T PRK04311        171 SRGELVEIGGAFRIPDVMRQAGARLVEV-GTTN---RTHLRDYEQAINENT--ALLLKVHTSNYRIEGFTKEVS---LAE  241 (464)
T ss_pred             cchhhhhcCcchhhHHHHHHCCcEEEEE-CCCC---CCCHHHHHHhcCccC--eEEEEEcCCCccccccCCcCC---HHH
Confidence            8865431      234567789999888 5432   237899999999876  99999999998  34  4567   999


Q ss_pred             HHHHHHHcCCEEEEeece--ec----cC--CCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          189 ISDLCKAAGSWLVVDNTY--FM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~----~~--~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      |+++|++||+++++|..+  +.    +.  ..+.  .....+.+++++|.+|.+|  |...|+++++   +++++++...
T Consensus       242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~li~~l~~~  316 (464)
T PRK04311        242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIARLKKH  316 (464)
T ss_pred             HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEc---HHHHHHHhhc
Confidence            999999999999999865  21    10  1111  1122456799999999986  3458999988   7888877632


Q ss_pred             hccCCCCcchHHHHHHHHHhcC----Cc--------hHHHHHHHHHHHHHHHHHHHhccCCC----CccccC--------
Q 015890          259 QDNIPICASIISQHLALYSLQT----GP--------EWVTERVKDLVRNREIIREALSPLGE----GAVKGG--------  314 (398)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~l~~----~~--------~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~--------  314 (398)
                      .-............+..++|..    .+        ..+....+.+.+++..+.+.|+....    ..+...        
T Consensus       317 ~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs  396 (464)
T PRK04311        317 PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGS  396 (464)
T ss_pred             hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCC
Confidence            2111222333444444444431    11        11233345666677888888876531    122211        


Q ss_pred             --Cc-cEEEEeeCCCCCCChHHHHHHHHHhcC--eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          315 --EG-AIYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       315 --~~-~~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                        .. -.-+.+.+.....+..++..+| ++..  |+.+-     ..+.+.+-+....++|++.++++|.+++.
T Consensus       397 ~p~~~~~~~~v~~~~~~~~~~~l~~~l-r~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        397 LPVDRLPSAAVTLTPKDRSLEALAARL-RLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEALN  463 (464)
T ss_pred             CcCCCCCeEEEEEeCCCCCHHHHHHHH-hcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence              00 0122333333234567777765 4644  44442     57888888888788888888888887653

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.83  E-value=8.3e-18  Score=150.75  Aligned_cols=214  Identities=21%  Similarity=0.213  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (398)
                      +.+..+...+....+  ....+++++|..|+..++..|+..|+.|++....|.+....+    ..+|++..++ ..+   
T Consensus        77 Pt~~~le~~iaal~g--a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v-d~~---  150 (409)
T KOG0053|consen   77 PTRDVLESGIAALEG--AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFV-DVD---  150 (409)
T ss_pred             CchHHHHHHHHHHhC--CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeee-chh---
Confidence            344555555554445  345888899989999999999999999999999998866544    4566777666 322   


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~  226 (398)
                         +++.+++.+++++  ++||+++|.||+..+.+   |++++++|+++|+++|||+++ -++--   .+...+.+|++.
T Consensus       151 ---~~~~~~~~i~~~t--~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~---~pL~lGADIV~h  219 (409)
T KOG0053|consen  151 ---DLKKILKAIKENT--KAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ---DPLPLGADIVVH  219 (409)
T ss_pred             ---hHHHHHHhhccCc--eEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc---ChhhcCCCEEEE
Confidence               6778888888865  99999999999999999   999999999999999999998 33211   112233559999


Q ss_pred             ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890          227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      |.+|.+|- .-+=.|.++.+.  +++..++........++.++.........++.    +.-+.++..++.-.+.+.|+.
T Consensus       220 SaTKyi~Ghsdvi~G~iv~n~--~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt----l~lRi~~~~ena~~~A~~Le~  293 (409)
T KOG0053|consen  220 SATKYIGGHSDVIGGSVVLNS--EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT----LHLRINKHSENALKIALLLEA  293 (409)
T ss_pred             eeeeeecCCcceeeeEEecCc--HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch----hhhhHHHHHHHHHHHHHHhhh
Confidence            99999962 335567888764  88999988888777778887776665555543    344455556666666666665


Q ss_pred             CCC
Q 015890          306 LGE  308 (398)
Q Consensus       306 ~~~  308 (398)
                      .+.
T Consensus       294 ~~~  296 (409)
T KOG0053|consen  294 HPK  296 (409)
T ss_pred             CCc
Confidence            554

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.82  E-value=7.3e-18  Score=146.82  Aligned_cols=289  Identities=19%  Similarity=0.238  Sum_probs=190.9

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~  142 (398)
                      .+-...++++++..=.   |+   --+.++|+.+|+..++..+.++||+|+....-|.+..    ..++.+|.++.++ +
T Consensus        61 NPT~~vlE~RiAaLEG---G~---aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv-d  133 (426)
T COG2873          61 NPTTDVLEERIAALEG---GV---AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV-D  133 (426)
T ss_pred             CchHHHHHHHHHHhhc---ch---hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe-C
Confidence            3444566666666421   22   2356788889999999999999999999988887644    4568889999988 3


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .      .|+|.+++++++++  |+|+++...||-+.+.+   +++|+++|+++|+++|||..+ -+|--.+   ...+.
T Consensus       134 ~------~d~~~~~~aI~~nT--kavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~rP---~~hGA  199 (426)
T COG2873         134 P------DDPENFEAAIDENT--KAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCRP---IEHGA  199 (426)
T ss_pred             C------CCHHHHHHHhCccc--ceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecch---hhcCC
Confidence            2      27899999999998  99999999999999999   999999999999999999988 4442222   22345


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHHHHH--HHH-----------------------------HhhccCCCCcchHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLL-----------------------------KVQDNIPICASIIS  270 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~--~l~-----------------------------~~~~~~~~~~~~~~  270 (398)
                      +|++.|++|++|-.|-.+|-+++..+.-++.+  ++.                             ........+.+++.
T Consensus       200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn  279 (426)
T COG2873         200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN  279 (426)
T ss_pred             CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence            69999999999878888887665542111110  000                             00011222334444


Q ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-----------------CC-ccEEEEeeCCCCCCChH
Q 015890          271 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----------------GE-GAIYLWARLPEKHLDDF  332 (398)
Q Consensus       271 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~  332 (398)
                      .......++.    +.-+.+++.+++..+.+.|+++|.+..+.                 +. .+-.+.+.+..+.....
T Consensus       280 Afl~lqGlET----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~  355 (426)
T COG2873         280 AFLLLQGLET----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGK  355 (426)
T ss_pred             HHHHHhchhh----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHH
Confidence            3333333332    45667778888889999998876532221                 11 13355556654332233


Q ss_pred             HHHHHHH---------HhcCeEEecCCCCC-------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLA---------HRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       333 ~~~~~ll---------~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+++.|-         +.+-+.+.|.+-..             .++.||+|++-   |+++.++..|++++++
T Consensus       356 ~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~DiiaDl~qAl~~  425 (426)
T COG2873         356 KFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDIDDIIADLEQALEA  425 (426)
T ss_pred             HHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhc
Confidence            3433221         12235555654321             25799999996   7777788888887754

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.82  E-value=4.3e-17  Score=165.11  Aligned_cols=313  Identities=16%  Similarity=0.118  Sum_probs=206.5

Q ss_pred             CCCCCC---CCCcHHHHHHHHHHHhhhcCCCCCcEEEec-ChHHHHHHHHHHhc----cCCC----EEEEeCCCCcChhh
Q 015890           61 ISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIVLTLC----DAGD----SVVMFAPYYFNSYM  128 (398)
Q Consensus        61 ~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~-g~t~a~~~~~~~l~----~~gd----~Vl~~~p~~~~~~~  128 (398)
                      .+.|.|   .+|..++...+.+++.+.+|.+  ++.+.. |++++....+.++.    ++|+    +|+++...|.....
T Consensus       528 ~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~  605 (954)
T PRK05367        528 LHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA  605 (954)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH
Confidence            444544   2467788889999999999975  455555 55565544443333    4554    69999999988888


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-  206 (398)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-  206 (398)
                      .++..|++++.+ +.+.+| .+|+++|+++++++ +.+.+|++++|++-.+...+   +++|+++|+++|+++++|.++ 
T Consensus       606 sa~~~G~~vv~v-~~d~~G-~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~  680 (954)
T PRK05367        606 SAVMAGMKVVVV-ACDENG-NIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANM  680 (954)
T ss_pred             HHHHCCCEEEEE-CCCCCC-CcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcCh
Confidence            899999999999 887654 78999999999863 44678888888876433467   999999999999999999999 


Q ss_pred             eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHhh-----c---cCCCCcchH----H
Q 015890          207 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKVQ-----D---NIPICASII----S  270 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~~-----~---~~~~~~~~~----~  270 (398)
                      ....+.... ...+.+++..|.+|+|+    .+|..+|.+.++   +.+...+....     .   ......+..    .
T Consensus       681 ~al~~l~~p-g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr---~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~  756 (954)
T PRK05367        681 NAQVGLARP-GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK---AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASI  756 (954)
T ss_pred             hhccCCCCh-hhcCCCEEEecCcccCCCCcCCCCCceEEEeec---ccccccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence            343332221 12334588899999975    234557888877   33332221110     0   001111111    1


Q ss_pred             HHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc--cEEEEeeC---CCC-CCChHHHHHHHHHhcC
Q 015890          271 QHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG--AIYLWARL---PEK-HLDDFEVVRWLAHRHG  343 (398)
Q Consensus       271 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~---~~~-~~~~~~~~~~ll~~~g  343 (398)
                      ...+...+.. +.+.+++..+....+++++.+.|++...+.+..+.+  ..=+++++   ++. ..+..++.++|. ++|
T Consensus       757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G  835 (954)
T PRK05367        757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYG  835 (954)
T ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCC
Confidence            1112223322 556677888878888999999887643223322211  11123333   221 235678889885 899


Q ss_pred             eEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          344 VVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.....+ |..++.++|+++- .+.+|+++++++|.....++.+
T Consensus       836 ~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        836 FHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             CeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence            9886633 4457889999888 7899999999999988877754

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.82  E-value=2.9e-17  Score=139.26  Aligned_cols=358  Identities=17%  Similarity=0.187  Sum_probs=243.7

Q ss_pred             ccCchHHHHHHHHHHcC--CCeEEcCCcc--CCCC---CcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890           13 ETEMPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus        13 ~~~~~~~~~~~~~~~~g--~~~~~l~~g~--~~~~---~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      ...........+.+.+.  ..-++|+.|.  .+-+   +-|.|.++-.....+ .-.+.|-|..|.+.+++..++.+-..
T Consensus        11 ~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~   90 (410)
T KOG1412|consen   11 VAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA   90 (410)
T ss_pred             cCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence            33444555555555443  3467777775  1222   235555544443332 22678888999999999999886422


Q ss_pred             cC--CCCCcE--EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-EEEEeccCCCCCCCCChHHHHH
Q 015890           85 NK--LYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-THILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        85 ~~--~~~~~v--~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                      ..  +..+.+  +=+-|||.|+......+.  -+...|.+..|+|.++...++..|. .+..++-.+.+.-.+|++.+..
T Consensus        91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Ls  170 (410)
T KOG1412|consen   91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLS  170 (410)
T ss_pred             CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHH
Confidence            11  112221  223566688887766653  2345799999999999999999995 4444422344445679999999


Q ss_pred             hhccCCCCeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-------cccCCcEEEEcc
Q 015890          158 TLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-------CVEGDHVVNLFS  227 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~-p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-------~~~~~~~i~~~s  227 (398)
                      .|+..+....+++.. .+||||.-.+.|++.+|++..++.+.+.+.|-+|  |..++....       ...+...+++.|
T Consensus       171 dl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QS  250 (410)
T KOG1412|consen  171 DLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQS  250 (410)
T ss_pred             HHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence            998766334555553 4999999999999999999999999999999999  443332211       122445789999


Q ss_pred             cccccCCCcceeEE--EEccCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCC---chH---HHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGY--IAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG---PEW---VTERVKDLVRN  295 (398)
Q Consensus       228 ~sK~~~~~G~r~G~--i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~---~~~~~~~~~~~  295 (398)
                      |+|.||+.+-|+|.  ++.++  +..+..    +........++++.....++.+.|...   ++|   +..+..++.+.
T Consensus       251 FaKNfGlYneRvGnltvv~~n--~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~M  328 (410)
T KOG1412|consen  251 FAKNFGLYNERVGNLTVVVNN--PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKM  328 (410)
T ss_pred             hhhhcccccccccceEEEecC--hhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999996  34444  444443    333444456678888888999998862   233   34556677778


Q ss_pred             HHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHH
Q 015890          296 REIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA  372 (398)
Q Consensus       296 ~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~  372 (398)
                      |.+|++.|..++.   +.-+..+.|+|.+-.+.      ...++.|.++++|++.+..        ||+++..+...++.
T Consensus       329 R~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt------p~qV~~li~~h~vyLl~~G--------RInisGLN~~Nvey  394 (410)
T KOG1412|consen  329 RTALRDHLVALKTPGTWDHITQQIGMFSYTGLT------PAQVDHLIENHKVYLLSDG--------RINISGLNMKNVEY  394 (410)
T ss_pred             HHHHHHHHHhcCCCCcHHHHHhhccceeecCCC------HHHHHHHHHhceEEEecCC--------cEeeeccccccHHH
Confidence            8888888876543   33344556888776654      3557778889999998754        88998888888999


Q ss_pred             HHHHHHHHHHHHhc
Q 015890          373 AADRLRRGLEELVK  386 (398)
Q Consensus       373 ~~~~l~~~~~~~~~  386 (398)
                      ...+|.++++.+..
T Consensus       395 VAkAIde~Vr~~~~  408 (410)
T KOG1412|consen  395 VAKAIDETVRAIKS  408 (410)
T ss_pred             HHHHHHHHHHhhcc
Confidence            99999888887654

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.82  E-value=6.5e-17  Score=134.69  Aligned_cols=332  Identities=17%  Similarity=0.150  Sum_probs=217.7

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--------CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--------DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      +++||++.=...-..+++.++|+.+.-+..+...|-.        .+....+.+.+++|+    |  -+.+-+|+|+.++
T Consensus        15 r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl----g--~D~~R~t~GARe~   88 (382)
T COG1103          15 RGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL----G--MDEVRVTAGAREA   88 (382)
T ss_pred             cCccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh----C--Cceeeecccchhh
Confidence            3566665322222368899999988755443333321        133455666677776    4  4678999999999


Q ss_pred             HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cC-CCCeEEEEeCCCCC
Q 015890          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TK-PTPKLVSVVNPGNP  176 (398)
Q Consensus       102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~-~~~~~v~i~~p~np  176 (398)
                      =++++.+++++||-|++...+|....-+++..|+++..++....-.+.+++|...+.++    +. ..+.+.+++++...
T Consensus        89 KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~  168 (382)
T COG1103          89 KFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGE  168 (382)
T ss_pred             HHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCC
Confidence            99999999999999999999999988899999999998832333346778887776665    32 33788889999888


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      -|.+.+   .+.++++|+++|+++++..+| .+.-.  .+....+.+++++|-+|+++ +.-++|.+...   .++.+.+
T Consensus       169 YGNl~D---akkva~ic~e~gvPlllN~AYt~Grmp--vs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~---eE~ae~V  239 (382)
T COG1103         169 YGNLAD---AKKVAKICREYGVPLLLNCAYTVGRMP--VSGKEIGADFIVGSGHKSMA-ASAPIGVLAMS---EEWAEIV  239 (382)
T ss_pred             cCCchh---hHHHHHHHHHcCCceEeecceeecccc--ccccccCCCEEEecCccchh-ccCCeeEEeeh---hHHHHHH
Confidence            888877   899999999999999999999 44422  22222344599999999997 44579999988   5666654


Q ss_pred             HHhh-c--------cCCCCcchHHHHHHHHHhcCCchHHHH---HHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEE
Q 015890          256 LKVQ-D--------NIPICASIISQHLALYSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLW  321 (398)
Q Consensus       256 ~~~~-~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~  321 (398)
                      .+.. .        ....+.-...+   ..++.+ -.+..+   +.+.--++.+.+.+.+++++++...+  |.....+.
T Consensus       240 ~r~Sg~~~~~KEvellGCT~rGapi---vTlmAS-fP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~  315 (382)
T COG1103         240 LRRSGRAFPKKEVELLGCTVRGAPI---VTLMAS-FPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMK  315 (382)
T ss_pred             HhhcccccccceeeeecccccCchH---HHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceee
Confidence            3221 1        01111111111   112222 222222   23334455677888888888655543  33222232


Q ss_pred             eeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          322 ARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       322 ~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +..|...       ....-+.+.| +++||.-   ...+...++.+|+-..+.++++..++++++.+++.
T Consensus       316 Fetp~f~eIakk~~r~gyFlY~EL-K~RgI~G---I~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         316 FETPVFHEIAKKHKRKGYFLYEEL-KKRGIHG---IQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             ecCchHHHHHHhCcCCceeeHHHH-HhcCccc---cccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            3332110       1223345555 5788743   22346789999977789999999999999887753

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.81  E-value=1.5e-17  Score=157.23  Aligned_cols=328  Identities=16%  Similarity=0.119  Sum_probs=194.6

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|.+.+|+.+++.+..  .+.. .  ...+-.+++.+....+. .+.+.+++++++|++
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~~~-~--~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e  118 (431)
T PRK06209         45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NFTR-P--SAIELDAAESFLELIDG-ADMVKFCKNGSDATS  118 (431)
T ss_pred             CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CCCC-C--CHHHHHHHHHHHHhCCc-cceEEEecCHHHHHH
Confidence            4688999998764  3333 58999999999998743  2321 1  22333445555443321 357999999999999


Q ss_pred             HHHHHhc-cCC-CEEEEe-CCCCcChhhHHH-----hcCcE--EE--EeccCCCCCCCCChHHHHHhhcc-CCCCeEEEE
Q 015890          104 NIVLTLC-DAG-DSVVMF-APYYFNSYMSFQ-----MTGVT--HI--LVGPCSSKTLHPDADWLEKTLET-KPTPKLVSV  170 (398)
Q Consensus       104 ~~~~~l~-~~g-d~Vl~~-~p~~~~~~~~~~-----~~g~~--~~--~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i  170 (398)
                      .+++... -.| .+|+.. ..+|+++.....     ..|..  ..  .. ...    .-|++.+++.++. ...+++|++
T Consensus       119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~~~~aavi~  193 (431)
T PRK06209        119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV-TFR----YNDIASLEALFEDHPGRIACVIL  193 (431)
T ss_pred             HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc-ccC----CCCHHHHHHHHHhCCCCEEEEEE
Confidence            9999754 123 456655 344443211100     00110  00  00 111    1278999998863 223567777


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc-CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      +..   .|...+.+.+++|.++|++||+++|+||++  +.+.+  ..... .+....+.+++|.+| .|+.+|+++++  
T Consensus       194 Epv---~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~--~g~~~~~gv~PDi~t~gK~lg-gG~p~~av~~~--  265 (431)
T PRK06209        194 EPA---TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM--RGAQKLYGIVPDLSCFGKALG-NGFAVSALAGK--  265 (431)
T ss_pred             ccc---cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc--chhhHHhCCCcceeeehhhhc-CCcccEEEEEH--
Confidence            643   344778889999999999999999999999  43321  11110 111123457899998 77899999998  


Q ss_pred             cHHHHHH--HHHh------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          248 VEGFATQ--LLKV------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       248 ~~~~~~~--l~~~------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                       +++.+.  +...      ....++++++...+++.+.|+..  ++..++..+.....++.+.+...+++........+.
T Consensus       266 -~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~  344 (431)
T PRK06209        266 -REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGR  344 (431)
T ss_pred             -HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecc
Confidence             677765  2111      12345566778888888887752  233444445555555555555455554322222222


Q ss_pred             EEEEeeC--CCCCCCh----HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          318 IYLWARL--PEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       318 ~~~~~~~--~~~~~~~----~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ...+..+  .......    ..+..+++ ++||++.|         ++++.. .+++++++++++|.+++.++.
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~---------l~is~~-ht~~dId~~l~~l~~~l~~~~  407 (431)
T PRK06209        345 PCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS---------LVVSYA-HGDADIERTIDAVHGALGVYR  407 (431)
T ss_pred             eEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc---------cccccc-CCHHHHHHHHHHHHHHHHHHH
Confidence            2222111  1111111    14456654 78997732         456644 589999999999999998874

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.81  E-value=3.7e-17  Score=156.36  Aligned_cols=308  Identities=10%  Similarity=0.094  Sum_probs=201.4

Q ss_pred             CCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-------------CCcEEEecChHHHHHHHHHHhcc-------------
Q 015890           58 DPSISKYGADEGLPELRDALVKKLNQENKLY-------------KSSVMVTAGANQAFVNIVLTLCD-------------  111 (398)
Q Consensus        58 ~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-------------~~~v~~~~g~t~a~~~~~~~l~~-------------  111 (398)
                      +.....+..++...++++.+.+|+.+..+..             ...-++++|+|+|+..++.+..+             
T Consensus       115 N~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~  194 (522)
T TIGR03799       115 NQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVA  194 (522)
T ss_pred             cCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccc
Confidence            3335667678888999999999998876321             12357899999999988876432             


Q ss_pred             -------------CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEe
Q 015890          112 -------------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVV  171 (398)
Q Consensus       112 -------------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~  171 (398)
                                   ++..|+++.-+|+++..+++..|+   +++.+ |++++ +.+|++.|++.++    .++.+-+|+.+
T Consensus       195 ~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~v-p~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvat  272 (522)
T TIGR03799       195 REGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAI-KTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGV  272 (522)
T ss_pred             cccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEE-EeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEE
Confidence                         124688899999999999999998   78888 88765 4799999999986    34323334444


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccC
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      ..++.||.+.|   +++|+++|+++|+++++|.+| ...  ... ...... ...+.++.|.||+++ ....+|.++.++
T Consensus       273 aGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~-~P~g~G~llvr~  348 (522)
T TIGR03799       273 AGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLY-VPMGAGMVLFKD  348 (522)
T ss_pred             ecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCC-cCcccEEEEEeC
Confidence            66789999999   999999999999999999999 221  110 000111 123467889999775 446689988875


Q ss_pred             CcHHHHHHHHHhhc-------------cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          247 EVEGFATQLLKVQD-------------NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       247 ~~~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                        +...+.+.....             ....+.+..+ ..+..+++. +...+++..++..++++++.+.|++.+.++++
T Consensus       349 --~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~  425 (522)
T TIGR03799       349 --PALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELV  425 (522)
T ss_pred             --HHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence              455444432100             0111222222 234444443 44668899999999999999999988777777


Q ss_pred             cCCccEEEEeeCCC-CCC--------------C------hHHHHHHHHHhcCeEEecCCC-----CCCC--CeEEEEecC
Q 015890          313 GGEGAIYLWARLPE-KHL--------------D------DFEVVRWLAHRHGVVVIPGGA-----CGCR--GHLRISFGG  364 (398)
Q Consensus       313 ~~~~~~~~~~~~~~-~~~--------------~------~~~~~~~ll~~~gi~v~~g~~-----~~~~--~~iRi~~~~  364 (398)
                      .++.-+.+++++.. ...              .      ...+.+++. +.|........     +.+.  -.+|++++.
T Consensus       426 ~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~n  504 (522)
T TIGR03799       426 TEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQPTVVFRVVLAN  504 (522)
T ss_pred             cCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCCCcEEEEEEecC
Confidence            65545556666422 110              0      123444443 44554433221     2112  369999887


Q ss_pred             --CCHHHHHHHHH
Q 015890          365 --LVEDDCKAAAD  375 (398)
Q Consensus       365 --~~~~~~~~~~~  375 (398)
                        ++.++++.+++
T Consensus       505 p~tt~~~i~~~l~  517 (522)
T TIGR03799       505 PLTTHEILQDILD  517 (522)
T ss_pred             CCCCHHHHHHHHH
Confidence              46666766554

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-16  Score=157.93  Aligned_cols=310  Identities=13%  Similarity=0.098  Sum_probs=204.0

Q ss_pred             CCCCCC---CCCcHHHHHHHHHHHhhhcCCCCCcEEEec-ChHHHHHHHHHHhcc-------C-CCEEEEeCCCCcChhh
Q 015890           61 ISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIVLTLCD-------A-GDSVVMFAPYYFNSYM  128 (398)
Q Consensus        61 ~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~-g~t~a~~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~  128 (398)
                      .+.|.|   .+|..++...+.+++++.+|.+.-  -+.+ +++.+..+.+.++..       + .++|+++...|+....
T Consensus       529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa  606 (954)
T PRK12566        529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA  606 (954)
T ss_pred             CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence            467777   789999999999999999887554  3443 455666566666432       2 3678899988866666


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-  206 (398)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-  206 (398)
                      .+...|++++.+ +.+++| .+|+++|+++++ .+++.++|.+++|++-++...+   +++|+++|+++|+++++|.++ 
T Consensus       607 sa~~~GieVv~V-p~D~~G-~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~---V~eI~~iah~~Galv~vDgA~~  681 (954)
T PRK12566        607 SAQMAGMRVVIV-ECDPDG-NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG---IREICEVVHQHGGQVYMDGANL  681 (954)
T ss_pred             HHHHCCCEEEEe-ccCCCC-CcCHHHHHHHhhccCCCEEEEEEEecCcCceecch---HHHHHHHHHHcCCEEEEEeeCh
Confidence            688899999999 887665 789999999997 3444578888888775544444   999999999999999999999 


Q ss_pred             eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHHhh----------ccCC--CC-cchH
Q 015890          207 FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLKVQ----------DNIP--IC-ASII  269 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~~~----------~~~~--~~-~~~~  269 (398)
                      ....+.... ...+.+++.++++|+|+.    +|..+|.+.+.   +.+...+....          ....  .+ .+..
T Consensus       682 ~a~~~l~~P-g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~---~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~  757 (954)
T PRK12566        682 NAQVGLARP-ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR---AHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSAS  757 (954)
T ss_pred             hhccCCCCh-hhcCCCEEEecCCcccCcCccCCCCccchhhhh---hhhhhhccCCCCcCCCCCCCCCCceeecccchHH
Confidence            444333221 223456889999999852    23445555555   33333332211          0000  11 1111


Q ss_pred             HHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc---EEEEeeCC---C-CCCChHHHHHHHHHh
Q 015890          270 SQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA---IYLWARLP---E-KHLDDFEVVRWLAHR  341 (398)
Q Consensus       270 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~---~-~~~~~~~~~~~ll~~  341 (398)
                      ...++...+.. +.+ +.+.......+++++.+.|++...+.+ .+..+   .=+.+++.   + ...+..++.++|+ +
T Consensus       758 ~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-d  834 (954)
T PRK12566        758 ILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLM-D  834 (954)
T ss_pred             HHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHH-H
Confidence            12222333332 344 555555567788899988876333233 32212   22333433   1 1245678999987 8


Q ss_pred             cCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          342 HGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +||.... ..|...+.+||+.+- .+.+|+++++++|.+..+++.
T Consensus       835 ~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~  878 (954)
T PRK12566        835 YGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG  878 (954)
T ss_pred             CCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence            9998755 344457899999888 889999999999998888864

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.80  E-value=2.1e-16  Score=148.59  Aligned_cols=310  Identities=15%  Similarity=0.120  Sum_probs=186.9

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEE
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV  117 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl  117 (398)
                      +.|+++++++.+.+.......|...     .....+++.+++++    |.+  ..+++++++.|+..++.+ +.+||+|+
T Consensus        92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~----gae--~alvv~sg~aAi~l~l~~-l~~GdeVI  164 (454)
T TIGR00474        92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT----GAE--DALVVNNNAAAVLLALNT-LAKGKEVI  164 (454)
T ss_pred             CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHH-hCCcCEEE
Confidence            3589999999988765432223211     11244555555554    543  356677888999988855 57899999


Q ss_pred             EeCCCCc---C---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC--c--cCCCHHHHH
Q 015890          118 MFAPYYF---N---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--G--TYIPERLLK  187 (398)
Q Consensus       118 ~~~p~~~---~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt--G--~~~~~~~l~  187 (398)
                      ++...|.   +   ....++..|++++.+ +...   ..+++++++++++++  ++|++.+++|++  |  ...|   ++
T Consensus       165 vs~~e~v~~ggs~~i~~~~~~~G~~~~~v-~~~~---~~~l~dle~aI~~~T--~lv~~~h~sN~~~~G~~~~~d---l~  235 (454)
T TIGR00474       165 VSRGELVEIGGSFRIPDVMEQSGAKLVEV-GTTN---RTHLKDYEDAITENT--ALLLKVHTSNYRIVGFTEEVS---IA  235 (454)
T ss_pred             ECCChhhhhcchhhHHHHHHHcCCEEEEe-CCCC---CCCHHHHHHhcCcCC--EEEEEEccCcccccCCCCCCC---HH
Confidence            9987642   2   234567789999888 5432   247899999998876  999999999985  5  4677   99


Q ss_pred             HHHHHHHHcCCEEEEeece--ec----cC--CCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          188 RISDLCKAAGSWLVVDNTY--FM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~----~~--~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +|+++|+++|+++++|.+.  +.    +.  ..+.  .....+.+++++|.+|++|  |...|+++++   +++++.+..
T Consensus       236 ~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~~i~~l~~  310 (454)
T TIGR00474       236 ELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIERLKK  310 (454)
T ss_pred             HHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEEC---HHHHHhhhh
Confidence            9999999999999999764  21    10  1111  1222345689999999996  3357999988   677766543


Q ss_pred             hhccCCCCcchHHHHHHHHHhcC----Cc--------hHHHHHHHHHHHHHHHHHHHhccC--CC--CccccCC----cc
Q 015890          258 VQDNIPICASIISQHLALYSLQT----GP--------EWVTERVKDLVRNREIIREALSPL--GE--GAVKGGE----GA  317 (398)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~l~~----~~--------~~~~~~~~~~~~~~~~l~~~l~~~--~~--~~~~~~~----~~  317 (398)
                      ..-...........+++.+.+..    .+        ..+....+.+++++..+.+.|++.  +.  ..+....    +|
T Consensus       311 ~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg  390 (454)
T TIGR00474       311 NPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGG  390 (454)
T ss_pred             chhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCC
Confidence            22111112222233333333321    11        112223445666677777777653  21  1222111    00


Q ss_pred             -------EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          318 -------IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       318 -------~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                             .-+.+.+.....+..++..+| ++....|..-   -.++.+.+-+....++|++.++++|
T Consensus       391 ~~p~~~l~~~~v~~~~~~~~~~~l~~~l-r~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       391 SLPDERLPSYAVTLTPDGLSAEKLEARL-RELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             CCcCCCCCeEEEEEecCCCCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence                   112233322234567777765 5666333221   2477888888887778887777665

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.80  E-value=5.5e-19  Score=153.21  Aligned_cols=282  Identities=21%  Similarity=0.246  Sum_probs=178.2

Q ss_pred             cHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHhccC----C--CEEEEeCCCCcChhhHHHhcCcEEEEec
Q 015890           70 LPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDA----G--DSVVMFAPYYFNSYMSFQMTGVTHILVG  141 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~----g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~  141 (398)
                      .++|.+.|.+.-....++  +...|++++|+|+.+++++.+|...    +  -+|+...|.|+.|......+.-....+ 
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w-  123 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW-  123 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE-
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc-
Confidence            366666666654444343  4567999999999999999998532    1  379999999988887654443222222 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCccccccC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCCVEG  219 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~~~~  219 (398)
                      .-|...+. +        +..+.+-.=++++||||.|.+     .+.++   +..+..+|.|-+| .+ |......   .
T Consensus       124 ~Gda~~~~-~--------~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI~~~---a  183 (363)
T PF04864_consen  124 AGDASNFK-N--------SDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPITAP---A  183 (363)
T ss_dssp             EEECCCGT-T---------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS---S----B
T ss_pred             cccHHhhc-c--------CCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccccCCC---C
Confidence            12222221 0        011112344788999999986     33333   4567788999999 33 2333332   3


Q ss_pred             CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC----Cc------hHHHHHH
Q 015890          220 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT----GP------EWVTERV  289 (398)
Q Consensus       220 ~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~------~~~~~~~  289 (398)
                      +.++.++|+||.-|-+|-|+||.++.+  +++.+++..+....+.+++.-.|.-+.+.|..    ..      +.+.--.
T Consensus       184 D~DiMLFT~SK~TGHAGSR~GWAlVKD--~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~  261 (363)
T PF04864_consen  184 DHDIMLFTLSKLTGHAGSRFGWALVKD--EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGY  261 (363)
T ss_dssp             --SEEEEEHHHHCS-GGG-EEEEEES---HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred             CCceEEEEEecccCccccccceeeecC--HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHH
Confidence            456999999999999999999999998  88999998888888889999899888887764    11      2444456


Q ss_pred             HHHHHHHHHHHHHhccCCCC--------------ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-C
Q 015890          290 KDLVRNREIIREALSPLGEG--------------AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-C  354 (398)
Q Consensus       290 ~~~~~~~~~l~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~  354 (398)
                      +.++++..+|++.+.+-.-+              ++..| ...|.|++.....   .+-|..++++.||..+.|..|+ .
T Consensus       262 ~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~ee---d~DC~~~l~~~~I~tr~G~~fga~  337 (363)
T PF04864_consen  262 STMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCEREE---DEDCYAVLREAKIITRSGVLFGAD  337 (363)
T ss_dssp             HHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSCG---GSSHHHHHHCTTEEEEEGGGGTS-
T ss_pred             HHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCcc---cccHHHHHHhCCcccCCCCccCCC
Confidence            67788888999988754321              12222 3678999997532   2335556679999999999997 4


Q ss_pred             CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          355 RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       355 ~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      +.++|+|+-. ++++++.++++|.+
T Consensus       338 ~ryVRlSml~-~~d~Fd~l~~rL~~  361 (363)
T PF04864_consen  338 SRYVRLSMLK-RDDDFDQLLERLSK  361 (363)
T ss_dssp             TTEEEEESSS--HHHHHHHHHHHHC
T ss_pred             CCeEEEeccC-CHHHHHHHHHHHHh
Confidence            6899999996 89999999999875

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK15029 arginine decarboxylase; Provisional

Probab=99.80  E-value=6.4e-16  Score=151.85  Aligned_cols=163  Identities=17%  Similarity=0.105  Sum_probs=122.7

Q ss_pred             HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCC--CCCC-
Q 015890           76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--LHPD-  151 (398)
Q Consensus        76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~~~d-  151 (398)
                      ...+..++.+|. ..-.++++|+|.+|.+++.+++++||+|+++..||-+....+...|+.++++.|.- +.|  ..++ 
T Consensus       209 eAq~~aA~~fgA-~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~  287 (755)
T PRK15029        209 ESEKYAARVFGA-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYP  287 (755)
T ss_pred             HHHHHHHHHhCC-CcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCc
Confidence            333334444465 35688899999999999999999999999999999999999999999999984432 222  1234 


Q ss_pred             ----hHHHHHhhccCCCCe--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-cc-
Q 015890          152 ----ADWLEKTLETKPTPK--------LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-KH-  214 (398)
Q Consensus       152 ----~e~l~~~l~~~~~~~--------~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~~-  214 (398)
                          ++.++++++..+..+        ++++++|++ -|++++   +++|+++|+++|++|++||||   +.|... +. 
T Consensus       288 ~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~  363 (755)
T PRK15029        288 QEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH  363 (755)
T ss_pred             cccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCcccccc
Confidence                889999997544344        899999876 799999   999999999999999999999   555432 21 


Q ss_pred             ccc-----c-CCc-EEEEcccccccCCCcceeEE-EEcc
Q 015890          215 CCV-----E-GDH-VVNLFSFSKAYGMMGWRVGY-IAYP  245 (398)
Q Consensus       215 ~~~-----~-~~~-~i~~~s~sK~~~~~G~r~G~-i~~~  245 (398)
                      .+.     . .+. ++++.|.||.+  |++.-|. +-.+
T Consensus       364 sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~  400 (755)
T PRK15029        364 YAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVR  400 (755)
T ss_pred             ccccccccccCCCceEEEEchhhcc--cchhhhhhheeC
Confidence            222     1 233 48899999998  4666554 4443

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.80  E-value=5.5e-18  Score=155.29  Aligned_cols=232  Identities=14%  Similarity=0.170  Sum_probs=146.3

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CC-
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KT-  147 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~-  147 (398)
                      ..+.++.+++.+    |. .+-.++++|+|.++.+++.+++++||+||++..+|.+....+...|+.++++.|.+. .| 
T Consensus        68 I~eAe~~aA~~f----GA-d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi  142 (417)
T PF01276_consen   68 IKEAEELAARAF----GA-DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI  142 (417)
T ss_dssp             HHHHHHHHHHHH----TE-SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred             HHHHHHHHHHhc----CC-CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence            344455555544    54 345888999999999999999999999999999999999999999999999855422 12 


Q ss_pred             -CCCCh-----HHHHHhhccCCCCeE---EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccc
Q 015890          148 -LHPDA-----DWLEKTLETKPTPKL---VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHC  215 (398)
Q Consensus       148 -~~~d~-----e~l~~~l~~~~~~~~---v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~  215 (398)
                       ..+++     +.++++++..+..++   |+|++|+. -|++++   +++|+++|+++|++|++||||   +.|...+..
T Consensus       143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~  218 (417)
T PF01276_consen  143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS  218 (417)
T ss_dssp             BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred             ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence             23456     999999986555555   99999876 799999   999999999999999999999   555533333


Q ss_pred             cccCC-------cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcCC-chHH
Q 015890          216 CVEGD-------HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQTG-PEWV  285 (398)
Q Consensus       216 ~~~~~-------~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~~~  285 (398)
                      ....+       .++++.|.||.++  ++.- +++-.+++-.--.++++...... +.+++.+.++.+..+.... ....
T Consensus       219 a~~~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G  296 (417)
T PF01276_consen  219 ALALGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEG  296 (417)
T ss_dssp             CSSTTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH
T ss_pred             hhhccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh
Confidence            32222       3488999999984  6544 45555542101133443333222 3444444444444443322 2233


Q ss_pred             HHHHHHHHHHHHHHHHHh---ccCCCCccc
Q 015890          286 TERVKDLVRNREIIREAL---SPLGEGAVK  312 (398)
Q Consensus       286 ~~~~~~~~~~~~~l~~~l---~~~~~~~~~  312 (398)
                      ++..+...++...+++.+   .+..++++.
T Consensus       297 ~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~  326 (417)
T PF01276_consen  297 RELLEEAIELAEEFRKKINRLNDIWGFKVL  326 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence            445555555555565555   555444443

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.80  E-value=8.1e-17  Score=147.81  Aligned_cols=313  Identities=14%  Similarity=0.075  Sum_probs=212.2

Q ss_pred             CCCCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhc-cCCCEE
Q 015890           41 YWQPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLC-DAGDSV  116 (398)
Q Consensus        41 ~~~~~~~-v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~-~~gd~V  116 (398)
                      |....|. ..+++.+.+..    ..+.++.+.++.+.+.+.+++.++.+.+  -++++.|+|.++++++.+++ ++|++|
T Consensus        11 p~~~~~~~~~~~~~~~~~~----~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~v   86 (374)
T TIGR01365        11 PCAKRPGWSIEELKNAPLG----RSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDV   86 (374)
T ss_pred             ccCCCchhhHHHHhhhhcc----cCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeE
Confidence            4444555 66666654433    2235666677888888888888886433  47779999999999999999 588899


Q ss_pred             EEeCCCCcC--hh-hHHHhcCc-EEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          117 VMFAPYYFN--SY-MSFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       117 l~~~p~~~~--~~-~~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      ++..  +++  +. +.++.+|+ ++..+ .. +.|..+++++++.    .   +.|++++..+.||+..|   +++++..
T Consensus        87 Lv~g--~FG~r~~~eia~~~g~~~v~~l-~~-~~g~~~~~~~ve~----~---~~v~~vhnETSTGv~np---v~~i~~~  152 (374)
T TIGR01365        87 LAWE--SFGKGWVTDVTKQLKLPDVRVL-EA-EYGKLPDLKKVDF----K---NDVVFTWNGTTSGVRVP---NGDFIPA  152 (374)
T ss_pred             EEEC--HHHHHHHHHHHHhcCCCCcEEE-cC-CCCCCCCHHHcCC----C---CCEEEecCCCchheecc---ccccccc
Confidence            9864  444  34 77888999 46766 43 3555678888873    1   23678888899999999   5555532


Q ss_pred             HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-------------
Q 015890          193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------------  258 (398)
Q Consensus       193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-------------  258 (398)
                      +  ++.++|+|.+. ++-......    +.++++.|..|.+++|+ .+++++.+   ++.+++....             
T Consensus       153 ~--~~~lliVDavSs~g~~~l~~d----~iDv~~tgsQK~L~~pp-Gls~v~vs---~~Al~~~~~~~~y~~~~~~~~~~  222 (374)
T TIGR01365       153 D--REGLTICDATSAAFAQDLDYH----KLDVVTFSWQKVLGGEG-AHGMLILS---PRAVARLESYTPAWPLPKIFRLT  222 (374)
T ss_pred             c--CCCcEEEEccchhcCCCCChh----HCcEEEEechhccCCCC-ceEEEEEC---HHHHHHHhhcCCCCCChhhhccc
Confidence            2  48999999888 554332222    25588889999998643 35778878   5555443310             


Q ss_pred             ----------hccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccEEEEe
Q 015890          259 ----------QDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWA  322 (398)
Q Consensus       259 ----------~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~  322 (398)
                                ...++++++.....++..+++.. + ..++.+.++++++++.+++.++++|+......    .......+
T Consensus       223 ~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v  302 (374)
T TIGR01365       223 KGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCL  302 (374)
T ss_pred             cccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEE
Confidence                      12345566666777766666531 1 24889999999999999999999984344431    11223444


Q ss_pred             eCCCCCC-----C-----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       323 ~~~~~~~-----~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      .++....     +     ..++...+ +++||.+.+|..-..+..+||+... .+.+|++.+++.|.=+.+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       303 KVVDPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             EeCCccccccccchhhHHHHHHHHHH-HHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence            5543311     2     45666655 5789999988765456889998666 899999999998875543

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.79  E-value=1.1e-16  Score=150.26  Aligned_cols=297  Identities=16%  Similarity=0.142  Sum_probs=208.4

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccC--------C
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDA--------G  113 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~--------g  113 (398)
                      .+++...+.+...+..+ .......++..++.+.+..++.+.++.+ .-.-.+|+|+|+++...+.+....        +
T Consensus        73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~  151 (460)
T COG0076          73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES  151 (460)
T ss_pred             CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence            35677777777776653 3333345577899999999999999874 446889999999999888875421        1


Q ss_pred             C------EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          114 D------SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       114 d------~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      .      +|+++...|+++.++++.+|++...+ +++.....+|++++++++++.+...+|+.+.++.++|.+-|   ++
T Consensus       152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v-~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~  227 (460)
T COG0076         152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRV-PTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IE  227 (460)
T ss_pred             cccCCCCeEEecCcchhHHHHHHHHhCCCceeE-EeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HH
Confidence            1      69999999999999999999988888 77665678999999999998772223777778999999988   99


Q ss_pred             HHHHHHHHcCCEEEEeece----eccCCCccc-ccc-CCcEEEEcccccccCCCcceeEEEEccCCcH-HHHHHHHHhhc
Q 015890          188 RISDLCKAAGSWLVVDNTY----FMYDGRKHC-CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLLKVQD  260 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~----~~~~~~~~~-~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~-~~~~~l~~~~~  260 (398)
                      +|+++|++++++++||.++    +.|...... ... ...+-+..++||.+ ...+.+||++.++  + .+.+.+.....
T Consensus       228 ~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g-~aP~~~G~il~rd--~e~l~~~~~~~~~  304 (460)
T COG0076         228 ELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYG-LAPIGCGVVLFRD--EEALRRILIFADY  304 (460)
T ss_pred             HHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccccc-CCCCCceEEEEEC--HHHhhhhhhcccc
Confidence            9999999999999999999    333222222 122 22334567999987 4667899999997  5 34443321111


Q ss_pred             cCC----------CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCC
Q 015890          261 NIP----------ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL  329 (398)
Q Consensus       261 ~~~----------~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (398)
                      ..+          ++.+.....+..+.+.. +.+.+.+..++..++++++.+.+++.+...+..++..+.+.+++++...
T Consensus       305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~  384 (460)
T COG0076         305 YLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDED  384 (460)
T ss_pred             cCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCccc
Confidence            111          11223233333444443 5677899999999999999999999986577665558888888854221


Q ss_pred             ChHHHHHHHHHhcCeEEec
Q 015890          330 DDFEVVRWLAHRHGVVVIP  348 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~  348 (398)
                      ...+..+++ ++.|..+..
T Consensus       385 ~~~~~~~~~-~~~gw~v~~  402 (460)
T COG0076         385 TLADLSERL-DRRGWQVPA  402 (460)
T ss_pred             chhchHHHH-HhcCceeec
Confidence            133344444 356666643

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.79  E-value=1.8e-17  Score=142.53  Aligned_cols=350  Identities=17%  Similarity=0.181  Sum_probs=240.1

Q ss_pred             chHHHHHHHHHHcC--CCeEEcCCcc--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-C-
Q 015890           16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-K-   86 (398)
Q Consensus        16 ~~~~~~~~~~~~~g--~~~~~l~~g~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~-   86 (398)
                      ...+--+..++...  ..-+||++|.  .+.+   +-|.|.+|-.+.+.....-.|-|-.|.+++.+..++++-... . 
T Consensus        36 pDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~  115 (427)
T KOG1411|consen   36 PDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPV  115 (427)
T ss_pred             CCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchh
Confidence            33344455555544  4467777775  2222   458888887776664445689999999999999998863211 1 


Q ss_pred             CCCCcEEEe--cChHHHHHHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890           87 LYKSSVMVT--AGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus        87 ~~~~~v~~~--~g~t~a~~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                      +..+.|+.+  -++|.|+......+  .-++..|.+|.|+|.++...++..|+.+..++.-+.....+|.+.+-+.+...
T Consensus       116 ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~  195 (427)
T KOG1411|consen  116 IKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA  195 (427)
T ss_pred             hhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC
Confidence            123344443  45557776555544  34678999999999999999999999877663444555567888877777755


Q ss_pred             CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-------ccccCCcEEEEccccccc
Q 015890          163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-------CCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       163 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-------~~~~~~~~i~~~s~sK~~  232 (398)
                      +.-..|++. ..+||||+-.+.|++++|.++.++.+.+-+.|.+|  |..+....       ....+.+++++.|++|.+
T Consensus       196 p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM  275 (427)
T KOG1411|consen  196 PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM  275 (427)
T ss_pred             CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc
Confidence            533445554 45999999999999999999999999999999999  44332211       122356788899999999


Q ss_pred             CCCcceeEEE--EccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC---chHH---HHHHHHHHHHHHHHH
Q 015890          233 GMMGWRVGYI--AYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG---PEWV---TERVKDLVRNREIIR  300 (398)
Q Consensus       233 ~~~G~r~G~i--~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~---~~~~~~~~~~~~~l~  300 (398)
                      |+-|-|+|.+  ++.+  .+...++    ..+......++|.....++...|.+.   .+|.   .-+..++...+..+.
T Consensus       276 GLYgERvGa~svvc~~--ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~  353 (427)
T KOG1411|consen  276 GLYGERVGALSVVCKD--ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLF  353 (427)
T ss_pred             chhhhccceeEEEecC--HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHh
Confidence            9999999974  5554  4444443    33444555667777777777777652   2343   445666777788888


Q ss_pred             HHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          301 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       301 ~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      +.|++.+.   +..+..+-|+|.+-.+.      .+.+++|.+++.|+...-        -|||++..+...+..+.++|
T Consensus       354 d~L~~~gs~~~W~hI~~QIGMF~fTgl~------peQv~~l~ke~~iYmT~d--------GRiS~aG~ss~nV~yLa~ai  419 (427)
T KOG1411|consen  354 DALEKEGSPGNWSHITKQIGMFCFTGLN------PEQVDWLTKEYHIYLTKD--------GRISMAGLSSSNVPYLADAI  419 (427)
T ss_pred             HHhhcCCCCccHHHHHHhhheeeecCCC------HHHHHHHHhhheeeeccC--------ceEeeccccccCCcccchhh
Confidence            88887654   22344555788776664      367788888999998642        28998886667777777766


Q ss_pred             HHHH
Q 015890          378 RRGL  381 (398)
Q Consensus       378 ~~~~  381 (398)
                      .++-
T Consensus       420 h~vt  423 (427)
T KOG1411|consen  420 HAVT  423 (427)
T ss_pred             HhHh
Confidence            6543

>PLN02452 phosphoserine transaminase

Probab=99.79  E-value=1.2e-16  Score=146.74  Aligned_cols=323  Identities=13%  Similarity=0.123  Sum_probs=219.1

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFV  103 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~  103 (398)
                      .++|+-|  |...|++|++++.+.+.+..      +-..+.++.+.++.+.+.+.++++++++.  +-+++..|+|.+++
T Consensus         8 ~~~f~pG--P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e   85 (365)
T PLN02452          8 VFNFSAG--PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA   85 (365)
T ss_pred             eEeeeCC--CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence            4566555  77789999999988764311      11112355556777777788888888743  34677799999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++..+++.+|+++++...++++  +.+.++.+|...+.. .....  ...++++++    +..+.++.|.+++..+.||+
T Consensus        86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~v~~~hnETstGv  160 (365)
T PLN02452         86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIA-SGKDEKYTKIPSVSEW----ELTPDAKFVHICANETIHGV  160 (365)
T ss_pred             HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEE-ecCCCCCCCCCChHHc----CCCCCCcEEEECCCCCCCcE
Confidence            9999999999999998888866  556778888633332 11111  123565554    32334689999988899999


Q ss_pred             C-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          180 Y-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       180 ~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      . .+   ++++.      ++++|+|.++ ++....  .....+  ++..|.+|.+|++|  +|.++++   +++++++..
T Consensus       161 ~~~~---~~~i~------~~~lvVDa~Ss~g~~pi--dv~~~~--v~~~saqK~lGP~G--l~~v~vr---~~~l~~~~~  222 (365)
T PLN02452        161 EFKD---YPDVG------NVPLVADMSSNFLSKPV--DVSKYG--VIYAGAQKNVGPSG--VTIVIIR---KDLIGNARP  222 (365)
T ss_pred             ecCc---ccccC------CCeEEEECCccccCccc--CHHHcC--EEEEecccccCCCC--eEEEEEc---HHHHhhccc
Confidence            5 55   54443      3899999988 654332  222233  34469999999888  5888888   666655422


Q ss_pred             h------------hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCC-cc-ccC--CccEE
Q 015890          258 V------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AV-KGG--EGAIY  319 (398)
Q Consensus       258 ~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~~-~~~--~~~~~  319 (398)
                      .            .....+|+|.....++..+|+...+  .++.+.++.+++++.+++.|++..++ .. ..+  .....
T Consensus       223 ~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~  302 (365)
T PLN02452        223 ITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMN  302 (365)
T ss_pred             CCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeE
Confidence            1            1123357888888888888886322  47888899999999999999886432 11 111  22345


Q ss_pred             EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +.+.++.. ....++.+.+ +++|+...+|...  -+.+|+|+-. .+.++++.+++.++++.++
T Consensus       303 vsF~~~~~-~~~~~f~~~~-~~~g~~~~~G~r~--~gg~R~s~yna~~~~~v~~L~~~m~~f~~~  363 (365)
T PLN02452        303 VPFTLGGS-ELEAEFVKEA-AKAGMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  363 (365)
T ss_pred             EEEEcCCc-hhHHHHHHHH-HHCCCcccCCccc--cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            66666543 2455666655 7999999998743  2349999666 8889888888888877654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.79  E-value=5.7e-16  Score=154.42  Aligned_cols=313  Identities=16%  Similarity=0.088  Sum_probs=206.4

Q ss_pred             CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc--------CCCEEEEeCCCCcChhhH
Q 015890           61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--------AGDSVVMFAPYYFNSYMS  129 (398)
Q Consensus        61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~  129 (398)
                      .+.|.|.   +|..++...+..|+.+.+|.+. .-+..++++.+....+.+...        ..++|+++...|......
T Consensus       516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas  594 (939)
T TIGR00461       516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS  594 (939)
T ss_pred             cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH
Confidence            4555543   5678899999999999999874 233345555555544444432        235789999999888888


Q ss_pred             HHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e
Q 015890          130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F  207 (398)
Q Consensus       130 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~  207 (398)
                      ++..|++++.+ +.+++| .+|+++|++++++ +..+++|++++|+| +|.+.+.  +++|+++|+++|.++++|.++ .
T Consensus       595 a~~~G~~Vv~V-~~d~~G-~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~--I~eI~~iah~~G~~v~VDgAq~~  669 (939)
T TIGR00461       595 AAMAGMQVVPV-NCDQDG-NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT--IQHACDIVHSFGGQVYLDGANMN  669 (939)
T ss_pred             HHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc--HHHHHHHHHHcCCEEEEEecChh
Confidence            99999999999 887554 7899999999984 23368999999999 7877432  999999999999999999999 4


Q ss_pred             ccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHH--h-------------hccCC-CCcc
Q 015890          208 MYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLK--V-------------QDNIP-ICAS  267 (398)
Q Consensus       208 ~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~--~-------------~~~~~-~~~~  267 (398)
                      ...+... ....+.+++++|.+|.|+    .+|..+|.+.++   +++...+..  .             ..... ...+
T Consensus       670 al~~l~~-Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr---~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~  745 (939)
T TIGR00461       670 AQVGLTS-PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGS  745 (939)
T ss_pred             hCCCCCC-ccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh---hhchhhcCCCcccccccCCCCccccccccccccCc
Confidence            3333221 122345688999999775    355668999888   343332210  0             00001 1112


Q ss_pred             hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE---EEEeeCCC----CCCChHHHHHHHH
Q 015890          268 IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI---YLWARLPE----KHLDDFEVVRWLA  339 (398)
Q Consensus       268 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~ll  339 (398)
                      ......+...+.. +.+.+++..+....+++++.+.|++... ..+....+.   =+.++++.    ...+..++.++|+
T Consensus       746 a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~-~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~  824 (939)
T TIGR00461       746 ASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYP-ILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ  824 (939)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCc-ccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence            2222333333332 5677888888888899999999987332 223222122   24556652    1246788999987


Q ss_pred             HhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          340 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                       ++|+.... ..|...+.+=|.++- .+.+|+|++++++.+..+++.+
T Consensus       825 -d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       825 -DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             -hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence             88998644 333334454444444 5889999999999887776654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.79  E-value=1.8e-17  Score=141.68  Aligned_cols=331  Identities=14%  Similarity=0.150  Sum_probs=222.6

Q ss_pred             HHcCCCeEEcCCccCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           26 VRGAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      ...|+.++||-.+-...   -.+|-+++++.++..+-.+.+-   .....+.-.+++++..+++  -+.|+..+.+.+|.
T Consensus        55 D~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssr---afYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~  129 (427)
T KOG1402|consen   55 DPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSR---AFYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAV  129 (427)
T ss_pred             CCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhH---HHhhhhHHHHHHHHHHhcC--cceeeecccchhHH
Confidence            34688899998654222   3689999999998875211111   1112333344444444445  35577777778999


Q ss_pred             HHHHHHhcc--------C-C-CEEEEeCCCCcChhh----------HHHhcCcE----EEEeccCCCCCCCCChHHHHHh
Q 015890          103 VNIVLTLCD--------A-G-DSVVMFAPYYFNSYM----------SFQMTGVT----HILVGPCSSKTLHPDADWLEKT  158 (398)
Q Consensus       103 ~~~~~~l~~--------~-g-d~Vl~~~p~~~~~~~----------~~~~~g~~----~~~~~~~~~~~~~~d~e~l~~~  158 (398)
                      +.++....+        | . ..|+....+|++-..          ..+.+|.-    +..+    +.+   |+++|+..
T Consensus       130 Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v----~Y~---d~eale~~  202 (427)
T KOG1402|consen  130 ETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKV----PYG---DAEALEVA  202 (427)
T ss_pred             HHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceee----ccC---CHHHHHHH
Confidence            999887651        2 2 245556666655332          22333310    1111    112   79999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcE-EEEcccccccCC
Q 015890          159 LETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHV-VNLFSFSKAYGM  234 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~-i~~~s~sK~~~~  234 (398)
                      ++... .+++++...+...|++ .|+..+.+..++|.+||+++|.||++  ++..|...... ++++ ..+--+.|+++ 
T Consensus       203 l~~~~-vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d-~env~PDivilgKalS-  279 (427)
T KOG1402|consen  203 LKSPN-VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACD-YENVRPDIVILGKALS-  279 (427)
T ss_pred             hcCCC-eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEee-hhhcCCCeEEEecccc-
Confidence            99744 7888888889999996 56668999999999999999999999  77777543332 1111 11224569997 


Q ss_pred             Cc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-----
Q 015890          235 MG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-----  308 (398)
Q Consensus       235 ~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----  308 (398)
                      +| ++++.++++   +++.-.+.......+++.|+.+.+++.++|+...  -++..++....-+.+++.|.+++.     
T Consensus       280 GG~~Pvsavl~~---~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~~lG~~l~~~L~~l~~~~p~~  354 (427)
T KOG1402|consen  280 GGVYPVSAVLAD---DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRDQLNKLQKKFPHV  354 (427)
T ss_pred             CCeeeeEEEEec---HHHHhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccccch
Confidence            45 588888888   6888778887788899999999999999998522  245555566666666666665543     


Q ss_pred             CccccCCccEEEEeeCC---CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      ++..... |++..+.+.   ....++.+++..+ +++|+...|-.    .+-||++..- ++++|+++.++++.+++.
T Consensus       355 v~~VRGr-Gl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  355 VKEVRGR-GLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             hheeecc-ceEEEEEeccccccchhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            2444556 666666664   2224566777755 68999887753    5689999777 899999999999998764

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.78  E-value=1.2e-17  Score=138.26  Aligned_cols=164  Identities=23%  Similarity=0.253  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh-hHHHhcCcEEEEeccCCCCCC-
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTL-  148 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~-  148 (398)
                      .++++.+++++    +.+.+++++++|+|+++..++.++.+++++|+++.++|++.. ..++..|+++..+ +.+..+. 
T Consensus         3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~   77 (170)
T cd01494           3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPV-PVDDAGYG   77 (170)
T ss_pred             HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEe-ccCCCCcc
Confidence            46677777766    355788999999999999999999988999999999999988 8889999999988 6655432 


Q ss_pred             CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      ..+.+.+++..... .++++++++++|++|...+   +++|.++|+++|+++|+|++|  +............+.++++.
T Consensus        78 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~  153 (170)
T cd01494          78 GLDVAILEELKAKP-NVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF  153 (170)
T ss_pred             chhhhhhhhccccC-ceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence            22323554444332 3699999999999999998   688999999999999999999  22222111122234568889


Q ss_pred             ccccccCCCcceeEEEEcc
Q 015890          227 SFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~  245 (398)
                      |++|.++.  .++|+++++
T Consensus       154 s~~K~~~~--~~~G~l~~~  170 (170)
T cd01494         154 SLHKNLGG--EGGGVVIVK  170 (170)
T ss_pred             EcccccCC--CceEEEEeC
Confidence            99999973  678998764

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.78  E-value=1.1e-18  Score=154.77  Aligned_cols=246  Identities=19%  Similarity=0.212  Sum_probs=164.8

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY  123 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~  123 (398)
                      ++|++++++.+....+ . .|+.++...++++.+++.+    |  .+..++++++|.++.+++++++++++.|++..++|
T Consensus         7 ~~~~m~~a~~~a~~gd-~-~Yg~D~~~~~l~~~i~~l~----g--~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aH   78 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGD-D-AYGEDPTTARLEERIAELF----G--KEAALFVPSGTMANQLALRAHLRPGESVICADTAH   78 (290)
T ss_dssp             S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEH
T ss_pred             CCHHHHHHHHccccCC-c-ccCCChhHHHHHHHHHHHc----C--CCEEEEeCCCChHHHHHHHHHHhcCCceeccccce
Confidence            6899999996654433 2 5888877788888888877    4  45667999999999999999999999999999988


Q ss_pred             cC---hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCC-CccCCCHHHHHHHHHHHHH
Q 015890          124 FN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP-SGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       124 ~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~np-tG~~~~~~~l~~i~~l~~~  195 (398)
                      ..   ........|.+++.+ +.++. ..+++++|++.++.    .+.+++|+|++++|. .|.+++.+++++|.++|++
T Consensus        79 i~~~E~ga~~~~~G~~~~~l-~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~  156 (290)
T PF01212_consen   79 IHFDETGAIEELSGAKLIPL-PSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE  156 (290)
T ss_dssp             HHHSSTTHHHHHTTCEEEEE-BECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH
T ss_pred             eeeeccchhhHhcCcEEEEC-CCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh
Confidence            42   223336689999988 65542 47899999999984    234799999999886 3889999999999999999


Q ss_pred             cCCEEEEeeceec----cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc--hH
Q 015890          196 AGSWLVVDNTYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS--II  269 (398)
Q Consensus       196 ~~~~livDe~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~--~~  269 (398)
                      +|+.++.|.+.+.    ..+.........-+.+..|++|.+++++  .+.++++   +++++.-...+......+.  .+
T Consensus       157 ~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~--Gavl~~~---~~~i~~~~~~~k~~gg~~~~~G~  231 (290)
T PF01212_consen  157 HGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG--GAVLAGN---KEFIAKARRQRKRLGGGMRQAGV  231 (290)
T ss_dssp             HT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS--EEEEEES---HHHHHHHHHHHHHHTHHHHHTTH
T ss_pred             CceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc--ceEEEec---hHHHHHHHHHHHHhccCeeecce
Confidence            9999999999821    1121111111234477789999887655  2455666   6766554433332221111  11


Q ss_pred             HHH------HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          270 SQH------LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       270 ~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      ..+      ++...++.   + .....+..++.+++.+.|+.+++
T Consensus       232 ~~a~~~~~~~~l~~l~~---~-~~~~~~~~~~A~~La~~l~~~~~  272 (290)
T PF01212_consen  232 LAAAELYQFAALRALEL---W-LERARHANAMAKRLAAGLEALGG  272 (290)
T ss_dssp             HHHHHHHHHHHHCHEEC---S-HHHHHCHHHHHHCHHHCHHEECE
T ss_pred             eeeechhhHHHHHHHHh---h-HHHHHHHHHHHHHHHHHHHHCCC
Confidence            111      22223332   2 45556677778889999988776

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.76  E-value=1.1e-17  Score=153.27  Aligned_cols=289  Identities=15%  Similarity=0.105  Sum_probs=182.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..+.  ..++ -+|++.+++.+++....  .........+....+++.+.+..+-..+.+.+++|+++|++
T Consensus        13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~--~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve   90 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLN--YVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVE   90 (339)
T ss_dssp             TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCS--SCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCCccceecCCCccccchhHHHHhhhcc--cccccceeccchhhhhhhhhhccccccceeeeccCchHHHH
Confidence            4788999998653  4443 57999999999887632  12223444566777888887776445678999999999999


Q ss_pred             HHHHHhc-------c-CCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCCCC----CCChHHHHHh
Q 015890          104 NIVLTLC-------D-AGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTL----HPDADWLEKT  158 (398)
Q Consensus       104 ~~~~~l~-------~-~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~----~~d~e~l~~~  158 (398)
                      .+++...       . ...+|+....+|++....+...+             ..+..+ |.+....    .-..+.+++.
T Consensus        91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~  169 (339)
T PF00202_consen   91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFV-PFPDPAADEEEQACLNALEEL  169 (339)
T ss_dssp             HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEE-ETTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccc-cCCccchhhhHHHHHHHHHHH
Confidence            9999876       1 23699999999998654332211             122233 3221100    0001113332


Q ss_pred             hc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC--CcEEEEcccccc
Q 015890          159 LE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKA  231 (398)
Q Consensus       159 l~--~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~--~~~i~~~s~sK~  231 (398)
                      +.  ....+.+|+++..+...|.. .+++.+++|.++|++||+++|+||++  ++..|........  ..+++  +++|.
T Consensus       170 ~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv--~~gK~  247 (339)
T PF00202_consen  170 IAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIV--TFGKG  247 (339)
T ss_dssp             HHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEE--EEEGG
T ss_pred             HHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccc--ccccc
Confidence            22  12236889999767666764 57788999999999999999999999  6566644322211  12244  55799


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      ++ .|+++|.++.+   +++.+.+.......+++.++.+.+++.+.|+..+  +..++..+.-.+..+.|.+.-+..+.+
T Consensus       248 l~-gG~p~sav~~~---~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i  323 (339)
T PF00202_consen  248 LG-GGLPISAVLGS---EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLI  323 (339)
T ss_dssp             GG-TTSSEEEEEEE---HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             hh-hhhhccccccc---chhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            97 77999999999   7777766555555678888999999999888622  334444444444455555333334554


Q ss_pred             ccccCCccEEEEeeCC
Q 015890          310 AVKGGEGAIYLWARLP  325 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~  325 (398)
                      .-+... |.++.+++.
T Consensus       324 ~~vrg~-Gl~~~ie~~  338 (339)
T PF00202_consen  324 GEVRGI-GLMIGIELV  338 (339)
T ss_dssp             EEEEEE-TTEEEEEES
T ss_pred             EEEeee-CeEEEEEEE
Confidence            444455 555555553

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.75  E-value=1.2e-15  Score=138.44  Aligned_cols=323  Identities=15%  Similarity=0.090  Sum_probs=212.6

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFV  103 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~  103 (398)
                      .++|+.|  |...|++|++++.+.+.+...      --.+.++.+.++.+.+.+.++++++++.  +-+++..|+|.++.
T Consensus         5 ~~nF~aG--Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e   82 (364)
T PRK12462          5 QLNFSGG--PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS   82 (364)
T ss_pred             cceecCC--CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence            4566655  666789999999987755221      1122345567777777788888888843  34556677999999


Q ss_pred             HHHHHhccCCCEEE-EeCCCCcC--hhhHHHhcCcEEEEeccC---CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          104 NIVLTLCDAGDSVV-MFAPYYFN--SYMSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl-~~~p~~~~--~~~~~~~~g~~~~~~~~~---~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      ++...++.+|++++ +...++++  +...++.+| ++..+ ..   ...+..++++.+    +..+..+.|.+++..+.|
T Consensus        83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~-~~~~~~~~~~~p~~~~~----~~~~d~~~v~~t~NETst  156 (364)
T PRK12462         83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVV-WDGAASGYRTLPSLAEL----DWDARAPFRHYVSNETVE  156 (364)
T ss_pred             HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEe-cCcCCCCCCcCCCHHHh----ccCCCCcEEEEccCCCCc
Confidence            99999999999776 66667655  556677777 44433 21   112233455554    322235889999888889


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      |+.++        ++.+.++.++|+|.+. +.-  .+......  +++..+..|.+|+||  ++.++.+   ++++++..
T Consensus       157 Gv~~~--------~~~~~~~~llvvD~sS~~~s--~pid~~~~--dvi~agsQKnlgP~G--ltvvivs---~~al~~~~  219 (364)
T PRK12462        157 GLQFP--------DAAGLPDSPLIADMSSDFMS--RPFDVEAY--GMVYAHAQKNLGPAG--VTVAIIR---RALLERVP  219 (364)
T ss_pred             eEecC--------cccccCCCeEEEEcCchhhC--CCCChHHc--cEEEeeccccCCCCc--eEEEEEC---HHHHhhcc
Confidence            99886        1222368999999888 533  23333333  477888999999777  4777777   56555433


Q ss_pred             Hh------------hccCCCCcchHHHHHHHHHhcCC-ch--HHHHHHHHHHHHHHHHHHHhccCCCCcc--cc--CCcc
Q 015890          257 KV------------QDNIPICASIISQHLALYSLQTG-PE--WVTERVKDLVRNREIIREALSPLGEGAV--KG--GEGA  317 (398)
Q Consensus       257 ~~------------~~~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~--~~~~  317 (398)
                      ..            ......|++.+.+.++...++.. ++  .++.+.++.+++++.+++.+++.++...  ..  ....
T Consensus       220 ~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~  299 (364)
T PRK12462        220 DTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST  299 (364)
T ss_pred             ccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence            21            11234578888888888887652 23  6788889999999999999988763111  11  2223


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +-+.+++... ....+|... ++++|+.-..|.  ..-+.+|+|+-. .+.+.++++++-++++-++
T Consensus       300 mnv~f~~~~~-~l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        300 MNVAFRFRQP-RLDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             ceEEEEcCCH-HHHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            4455566532 124455554 468999886664  346779999766 7888887777777766543

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.73  E-value=9.1e-15  Score=147.75  Aligned_cols=330  Identities=13%  Similarity=0.050  Sum_probs=213.7

Q ss_pred             hHHHHHHHHHHcCCCeEEcCC-ccCCCCCcHHHHHHHHHhhcC-CCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWD-PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~-g~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      ...+.+++....+..+.+|.. |.-+...|+.+++++.+...- ...+.|++.  +|..+....+...+.++.|.+++++
T Consensus        89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~ana  168 (993)
T PLN02414         89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNA  168 (993)
T ss_pred             HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhE
Confidence            344555555555455555553 444555778887887764431 224555543  5555555666666777779999999


Q ss_pred             EEecChHHHHHHHHHHhc-cCC--CEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC-DAG--DSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~-~~g--d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      .++.++|++.++++.++. ++|  ++|++++..|+.....+    +..|++++.+ +.+..+          ...+.  +
T Consensus       169 SL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v-~~~~~~----------~~~~~--v  235 (993)
T PLN02414        169 SLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVA-DEKDFD----------YSSGD--V  235 (993)
T ss_pred             eecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEe-cchhhc----------cccCc--e
Confidence            999999999999887773 433  78999999998876544    4568888888 553211          01111  3


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC---CCcceeEE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG---MMGWRVGY  241 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~---~~G~r~G~  241 (398)
                      ..+++..|+ .+|.+.|   +++|+++|+++|+++++ .++ +...+... +...+-++++++.+|+.+   ..|.+.|+
T Consensus       236 ~~vlvq~P~-~~G~v~d---v~~I~~~ah~~GaL~iV-aad~lal~~l~~-pge~GADi~vgsgqKwg~P~G~GGP~aGf  309 (993)
T PLN02414        236 CGVLVQYPA-TDGEVLD---YAEFVKNAHANGVKVVM-ATDLLALTMLKP-PGEWGADIVVGSAQRFGVPMGYGGPHAAF  309 (993)
T ss_pred             EEEEEecCC-CCeEEcC---HHHHHHHHHHcCCEEEE-EECHHHhcCCCC-HhhccCcEEEECCCccccCCCCCCCCeeE
Confidence            455555554 4999998   99999999999999999 666 44433321 222345688999999872   23556899


Q ss_pred             EEccCCcHHHHHHHHH-hh---------cc--------------CCCCcchHHHHHHHHHhc------CCchHHHHHHHH
Q 015890          242 IAYPSEVEGFATQLLK-VQ---------DN--------------IPICASIISQHLALYSLQ------TGPEWVTERVKD  291 (398)
Q Consensus       242 i~~~~~~~~~~~~l~~-~~---------~~--------------~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~  291 (398)
                      +.++   +++.+.+.. +.         ..              -..+.|.....++.+.+.      .+...+++..++
T Consensus       310 lavr---~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~r  386 (993)
T PLN02414        310 LATS---QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR  386 (993)
T ss_pred             EEEC---HHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence            9998   455443210 00         00              012334433333333332      123446777888


Q ss_pred             HHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890          292 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC  370 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~  370 (398)
                      +.++..++.+.|+..|. ++..+....-+.+.++    +..++.++|+ ++||.++...    .+.+|+|++. .+++|+
T Consensus       387 i~~la~~l~~~L~~~G~-~~~~~~~f~~vt~~~~----~~~~v~~~L~-~~gI~l~~~~----~~~lrvs~~e~~T~edI  456 (993)
T PLN02414        387 VHGLAGVFAAGLKKLGF-QVQSLPFFDTVKVKCS----DADAIADAAA-KVGINLRVVD----ANTVTVSFDETTTLEDV  456 (993)
T ss_pred             HHHHHHHHHHHHhhcCC-ccCCCCCcCeEEEecC----CHHHHHHHHH-HCCCeeEEec----CCeEEEEeeccCCHHHH
Confidence            89999999999987664 5544332233444553    3577888775 8899776532    5679999999 899999


Q ss_pred             HHHHHHHH
Q 015890          371 KAAADRLR  378 (398)
Q Consensus       371 ~~~~~~l~  378 (398)
                      +.+++.|.
T Consensus       457 d~L~~~l~  464 (993)
T PLN02414        457 DKLFKVFA  464 (993)
T ss_pred             HHHHHHHc
Confidence            99999996

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.72  E-value=3.4e-14  Score=138.44  Aligned_cols=162  Identities=14%  Similarity=0.114  Sum_probs=116.4

Q ss_pred             HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEeccCC-CCC--CCCC
Q 015890           76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS-SKT--LHPD  151 (398)
Q Consensus        76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~-~~~--~~~d  151 (398)
                      ...+..++.+|.+ +-.++++|+|.+|.+++.+++++||+||++..||-+.... +-..|+.++++.|.. ..|  ..++
T Consensus       178 eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~  256 (720)
T PRK13578        178 DAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGID  256 (720)
T ss_pred             HHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCC
Confidence            3333344444653 4588899999999999999999999999999999998885 889999999984432 222  1245


Q ss_pred             h-----HHHHHhhccC-CC-------CeEEEEeCCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEeece---eccCCC--
Q 015890          152 A-----DWLEKTLETK-PT-------PKLVSVVNPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTY---FMYDGR--  212 (398)
Q Consensus       152 ~-----e~l~~~l~~~-~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~l-~~~~~~~livDe~~---~~~~~~--  212 (398)
                      .     +.|+++++.. +.       .++++|++|+. -|.+++   ++.|+++ ++.++ +|++||||   +.|...  
T Consensus       257 ~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~  331 (720)
T PRK13578        257 AHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMA  331 (720)
T ss_pred             hHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccCcccc
Confidence            4     4488888754 21       48899998865 799999   8889888 67777 99999999   444331  


Q ss_pred             --ccccccC----CcEEEEcccccccCCCcceeEE-EEcc
Q 015890          213 --KHCCVEG----DHVVNLFSFSKAYGMMGWRVGY-IAYP  245 (398)
Q Consensus       213 --~~~~~~~----~~~i~~~s~sK~~~~~G~r~G~-i~~~  245 (398)
                        +......    +.++++.|.||.+  +++.-+. +-.+
T Consensus       332 ~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk  369 (720)
T PRK13578        332 DCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK  369 (720)
T ss_pred             cCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence              1111111    2348899999998  4665554 4443

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=1.6e-15  Score=135.10  Aligned_cols=316  Identities=17%  Similarity=0.175  Sum_probs=208.9

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY  122 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~  122 (398)
                      +..+.+.+++...--..+...  ...|..++-+.+.+..+++.|. ++.+++..|- ..+...+.+++.+|.-|+..+-.
T Consensus       155 ~ca~~~~~~~~kygl~~css~--~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mGf-~TNs~~~p~l~~~gsLIiSDelN  230 (519)
T KOG1357|consen  155 PCAEASLKSFDKYGLSRCSSR--HEAGTTEEHKELEELVARFLGV-EDAIVFSMGF-ATNSMNIPSLLGKGSLIISDELN  230 (519)
T ss_pred             cCChHHHHHHHHhcccccccc--hhcccHHHHHHHHHHHHHhcCC-cceEEEeccc-cccccCcceeecCCcceeecccc
Confidence            355777777766432211111  1223334444444444433353 5567777763 77778888999999999999999


Q ss_pred             CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc----------cCCCCeEEEEe-CCCCCCccCCCHHHHHHHHH
Q 015890          123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----------TKPTPKLVSVV-NPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----------~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~  191 (398)
                      |.+....++.-|+.+..+ .   ++   |++.||+.|+          +.+.-+.+++. .-....|.+..   +.++.+
T Consensus       231 HaSi~~GaRLSgAtiRVf-k---HN---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vva  300 (519)
T KOG1357|consen  231 HASLITGARLSGATTRVF-R---HN---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVA  300 (519)
T ss_pred             chheeccccccCceEEEE-e---cC---CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHH
Confidence            999999999999877666 1   22   6677777765          11222454444 55667888888   999999


Q ss_pred             HHHHcCCEEEEeece-ec---cCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          192 LCKAAGSWLVVDNTY-FM---YDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~---~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      +++++..+++.||+| .+   ..|...    .....+.++.++++.|+||..|   |++.++   +++++.++.......
T Consensus       301 lkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags---k~lid~lrt~s~~~~  374 (519)
T KOG1357|consen  301 LKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS---KELIDYLRTPSPSAL  374 (519)
T ss_pred             hhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc---HHHHhhhccCCCcee
Confidence            999999999999999 33   333322    2223456788999999999777   999999   788888765432211


Q ss_pred             --CCcchHHHHHHHHHhcC-----CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHH
Q 015890          264 --ICASIISQHLALYSLQT-----GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR  336 (398)
Q Consensus       264 --~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (398)
                        ...+++........+..     +.+..++..+++.++..+++..|.+.++ .+++..++..+.+-+-.. .....+-.
T Consensus       375 yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gf-ivyG~~dSpVvplll~~~-~k~~~f~r  452 (519)
T KOG1357|consen  375 YATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGF-IVYGNNDSPVVPLLLYGP-AKIVAFSR  452 (519)
T ss_pred             ecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcE-EEecCCCCCcceeeecCc-ccccHHHH
Confidence              23344444444555543     2356788889999999999999988777 666665554443333211 12345555


Q ss_pred             HHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          337 WLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       337 ~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +++ +++|.+.-..+..   ....+|++.+. ++.|+++.+++.+.+.=
T Consensus       453 ~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g  500 (519)
T KOG1357|consen  453 EML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG  500 (519)
T ss_pred             HHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence            666 6677666555432   24678999888 88999998888887654

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.69  E-value=1.3e-13  Score=134.22  Aligned_cols=292  Identities=14%  Similarity=0.089  Sum_probs=175.7

Q ss_pred             HHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCC--CCC-
Q 015890           76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTL--HPD-  151 (398)
Q Consensus        76 ~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~--~~d-  151 (398)
                      ...+..++.+|.+ .-.++++|+|.+|.+++.+++.+||+||++..+|-+....+...|+.++++.|.. ..|.  .++ 
T Consensus       199 eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~  277 (714)
T PRK15400        199 EAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQ  277 (714)
T ss_pred             HHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCc
Confidence            3333344444653 4588899999999999999999999999999999999999999999999984432 2221  234 


Q ss_pred             ----hHHHHHhhccCCCCe---EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-c-cccccC
Q 015890          152 ----ADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-K-HCCVEG  219 (398)
Q Consensus       152 ----~e~l~~~l~~~~~~~---~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~-~~~~~~  219 (398)
                          .+.+++++...+..+   .++|++|+ --|.+++   ++.|.++|+.++  +++||||   +.|... + .++...
T Consensus       278 ~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~  351 (714)
T PRK15400        278 SEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSG  351 (714)
T ss_pred             cccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhc
Confidence                799999998554334   78888885 4899999   888899988776  7999999   444331 1 222211


Q ss_pred             -----CcEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhccCCCCcchHHHHH-HHHHhcCCc-hHHHHHHHH
Q 015890          220 -----DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHL-ALYSLQTGP-EWVTERVKD  291 (398)
Q Consensus       220 -----~~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~  291 (398)
                           +.++++.|.||.+  +++.-+. +-.+....  .++++........++|+....| +..+..... +..++..+.
T Consensus       352 ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd--~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~  427 (714)
T PRK15400        352 GRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVN--EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING  427 (714)
T ss_pred             CCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence                 3348899999998  4665554 33332111  1334333322333444433333 222222111 122344444


Q ss_pred             HHHHHHHHHHHhccCCC------CccccCC-----------------------------ccEEEEeeCCC---------C
Q 015890          292 LVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLPE---------K  327 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~------~~~~~~~-----------------------------~~~~~~~~~~~---------~  327 (398)
                      ..+....+++.+.+++.      +.+..++                             +..-+.+..+.         .
T Consensus       428 ~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~  507 (714)
T PRK15400        428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDF  507 (714)
T ss_pred             HHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCcccccc
Confidence            44444555555544332      1222111                             01112333322         1


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +..+..+.++| +++||.+.-..    ...+-+-++- .+.++++.++++|.++-+.
T Consensus       508 Gipg~~v~~~L-~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~  559 (714)
T PRK15400        508 GIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA  559 (714)
T ss_pred             CCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence            23455666665 78999997643    4444444443 5888999898888876443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.68  E-value=4.4e-14  Score=143.46  Aligned_cols=329  Identities=15%  Similarity=0.109  Sum_probs=209.8

Q ss_pred             hHHHHHHHHHHcCCCeEEc-CCccCCCCCcHHHHHHHHHhh-cCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELV-WDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l-~~g~~~~~~~~~v~~a~~~~~-~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      ...+++++....+..+.+| +.|.-+.-.|+.+.+.+.+.- +-...+.|++  ++|.-+..-.+...+.++.|.+..++
T Consensus        62 e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~ana  141 (954)
T PRK05367         62 EALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANA  141 (954)
T ss_pred             HHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhc
Confidence            3445555555444443333 345444445666656554421 1111334443  35666667777777888889999999


Q ss_pred             EEecChHHHHHHHHHHhc-cC--CCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC-DA--GDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~-~~--gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      .+..++|++.+.++.++. .+  +++|++++..|+.....    ++..|++++.+ +.+.+     ++      .+ . .
T Consensus       142 Sl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~-~~~~d-----~~------~~-~-~  207 (954)
T PRK05367        142 SLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG-DAAKA-----LD------HD-D-V  207 (954)
T ss_pred             cccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe-cCccC-----CC------cc-c-E
Confidence            999999999998888873 34  48999999999876644    46679999988 65431     11      11 2 4


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccc-----cCCCcceeE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKA-----YGMMGWRVG  240 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~r~G  240 (398)
                      .++++..| |.+|.+.|   +++|+++|+++|+++++|..+....... .+...+-+++++|.+|+     +|  |...|
T Consensus       208 ~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l~-~pge~GaDi~vgs~qkfg~P~g~G--GP~aG  280 (954)
T PRK05367        208 FGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLLT-PPGEMGADIAVGSAQRFGVPMGFG--GPHAA  280 (954)
T ss_pred             EEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCCC-ChhhcCCCEEEeeCcccCCCCCCC--CCCEE
Confidence            56666666 56999998   9999999999999999997552221111 12223456889999998     54  44589


Q ss_pred             EEEccCCcHHHHHHHHHh-hc-----------------------cCCCCcchHHHHHHHHH-----hc-CCchHHHHHHH
Q 015890          241 YIAYPSEVEGFATQLLKV-QD-----------------------NIPICASIISQHLALYS-----LQ-TGPEWVTERVK  290 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~-~~-----------------------~~~~~~~~~~~~~~~~~-----l~-~~~~~~~~~~~  290 (398)
                      ++.++   +++.+.+... ..                       .-..+.|.....++.+.     +. .+...+++..+
T Consensus       281 flavr---~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~  357 (954)
T PRK05367        281 YFAVR---DAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIAR  357 (954)
T ss_pred             EEEEC---HHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence            99998   5555554210 00                       00012222211111111     11 23455778888


Q ss_pred             HHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       291 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      +...+..++.+.|+..+. ++..+....-+.++++   .+..++.++|+ ++||.++.-    ..+.+|+|++. .+++|
T Consensus       358 ~~~~la~~l~~~L~~~G~-~~~~~~~f~~~~~~~~---~~~~~i~~~l~-~~gi~~~~~----~~~~l~is~~e~~t~~d  428 (954)
T PRK05367        358 RVHRLAAILAAGLRALGL-EVVHDSFFDTLTVEVG---GDAAAVLARAL-AAGINLRRV----DDDHVGISLDETTTRED  428 (954)
T ss_pred             HHHHHHHHHHHHHHhcCc-ccCCCCCCCeEEEeCC---CCHHHHHHHHH-HCCceeccc----cCCEEEEEecccCCHHH
Confidence            889999999999977554 4433321223344443   25778888885 889988432    25689999998 88999


Q ss_pred             HHHHHHHHH
Q 015890          370 CKAAADRLR  378 (398)
Q Consensus       370 ~~~~~~~l~  378 (398)
                      ++++++.|.
T Consensus       429 id~l~~~l~  437 (954)
T PRK05367        429 LAALLAVFG  437 (954)
T ss_pred             HHHHHHHHc
Confidence            999999997

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.67  E-value=9.6e-13  Score=128.29  Aligned_cols=290  Identities=13%  Similarity=0.056  Sum_probs=171.6

Q ss_pred             HHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCC--CCCCh-
Q 015890           77 LVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--LHPDA-  152 (398)
Q Consensus        77 l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~~~d~-  152 (398)
                      ..+..++.+|.+ +-.++++|+|.+|.+++.+++.+||+||++..+|-+....+-..|+.++++.|.. +.|  ..++. 
T Consensus       200 Ae~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~  278 (713)
T PRK15399        200 AEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRR  278 (713)
T ss_pred             HHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChh
Confidence            333344444653 4588899999999999999999999999999999999999999999999984432 223  12444 


Q ss_pred             ----HHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEeece---eccCC-Cc-ccccc-
Q 015890          153 ----DWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTY---FMYDG-RK-HCCVE-  218 (398)
Q Consensus       153 ----e~l~~~l~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-ivDe~~---~~~~~-~~-~~~~~-  218 (398)
                          +.++++++..+.   |++++|++|+ --|.+++   ++.|.++|   |+.+ ++||||   +.|.. .+ ..+.. 
T Consensus       279 ~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~  351 (713)
T PRK15399        279 EFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSG  351 (713)
T ss_pred             hccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhC
Confidence                899999985432   4689999885 4899999   77788877   5666 699999   44433 11 22221 


Q ss_pred             ---CCc-EEEEcccccccCCCcceeE-EEEccCCcHHHHHHHHHhhccCCCCcchHHHHH-HHHHhcCCc-hHHHHHHHH
Q 015890          219 ---GDH-VVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL-ALYSLQTGP-EWVTERVKD  291 (398)
Q Consensus       219 ---~~~-~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~~~~~  291 (398)
                         .+. ++++.|.||.+  +++.-+ ++-.+....  .++++........+.|+....| +..+..... ...++..+.
T Consensus       352 ~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd--~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~  427 (713)
T PRK15399        352 ERVPGKVIFETQSTHKML--AAFSQASLIHIKGEYD--EETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINR  427 (713)
T ss_pred             CCCCCeeeeeeeehhccc--cccchheeeeecCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence               122 34488999998  466555 444443111  2344433332333444433333 222222111 122333344


Q ss_pred             HHHHHHHHHHHhccCCC------CccccCC-----------------------------ccEEEEeeCC---------CC
Q 015890          292 LVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLP---------EK  327 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~------~~~~~~~-----------------------------~~~~~~~~~~---------~~  327 (398)
                      ..+....+++.+.+++.      +.+..++                             +..-+.+..+         +.
T Consensus       428 ~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~  507 (713)
T PRK15399        428 SVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEE  507 (713)
T ss_pred             HHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccC
Confidence            44444444444433221      1222110                             0111223332         11


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +..+..+.++| +++||.+.-..    ...+-+-++- .+.++++.+++.|.++-+.
T Consensus       508 Gi~g~~l~~~L-~e~gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~  559 (713)
T PRK15399        508 GIPAALVAKFL-DERGIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA  559 (713)
T ss_pred             CCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence            24566677765 68999997643    3444444443 5888999998888876443

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.67  E-value=1.5e-14  Score=133.76  Aligned_cols=273  Identities=16%  Similarity=0.189  Sum_probs=180.1

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-------CcEEEecChHHHHHHHHHHhcc-----
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD-----  111 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-------~~v~~~~g~t~a~~~~~~~l~~-----  111 (398)
                      .++.++..+.....+.....|...+...++++.+.+++.+.+|.+.       ..-++|+|+|+++..++.+..+     
T Consensus        51 ~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~  130 (373)
T PF00282_consen   51 SPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPR  130 (373)
T ss_dssp             CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhh
Confidence            3555555555444454566676677889999999999999998762       3478899999999988876531     


Q ss_pred             ---CC-----C-EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc---C-CCCeEEEEeCCCCCCc
Q 015890          112 ---AG-----D-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---K-PTPKLVSVVNPGNPSG  178 (398)
Q Consensus       112 ---~g-----d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~---~-~~~~~v~i~~p~nptG  178 (398)
                         .|     . .|++++-+|.++..++..+|+.++.+ |++++ +.+|.++|+++++.   + ..|-+|+.+.++..+|
T Consensus       131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I-~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G  208 (373)
T PF00282_consen  131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKI-PTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG  208 (373)
T ss_dssp             HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE--BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred             hhhcccccccccccccccccccHHHHhcceeeeEEEEe-cCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence               12     2 56677779999999999999999999 88875 47899999998862   2 2134667778889999


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCC-Ccccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          179 TYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDG-RKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~-~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      .+-|   +++|+++|+++++|++||.+| .  .... ....... ...+=+..+.||+++ ..+.+|+++.++  +....
T Consensus       209 a~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~--~~~l~  282 (373)
T PF00282_consen  209 AIDP---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD--KSDLR  282 (373)
T ss_dssp             BB-S---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS--GGGHH
T ss_pred             cccC---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhc-CCccceeEEeec--ccchH
Confidence            9988   999999999999999999999 1  1211 1111111 111233558999997 556899998887  43333


Q ss_pred             HHHH----hhc-------------cCCCCcc-hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          254 QLLK----VQD-------------NIPICAS-IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       254 ~l~~----~~~-------------~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      ....    +..             ..+...+ ......+...+.. +.+.+.++.++..+.++++.+.+++.+.+++..+
T Consensus       283 ~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~  362 (373)
T PF00282_consen  283 DAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE  362 (373)
T ss_dssp             GGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred             HHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence            2110    000             0011111 2233333334432 5577889999999999999999999887677665


Q ss_pred             CccEEEEeeC
Q 015890          315 EGAIYLWARL  324 (398)
Q Consensus       315 ~~~~~~~~~~  324 (398)
                      +..+.+++++
T Consensus       363 ~~~~~vcFr~  372 (373)
T PF00282_consen  363 PDLNIVCFRY  372 (373)
T ss_dssp             TSSSEEEEEE
T ss_pred             CCceEEEEEe
Confidence            5466666553

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.66  E-value=3.8e-13  Score=125.91  Aligned_cols=297  Identities=16%  Similarity=0.178  Sum_probs=188.6

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CC-CC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS-KT  147 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~-~~  147 (398)
                      ..+..+..++.+    |.+ ...++++|+|.|+..++.+++.+||.||++.++|-+....+-..|+.++++.|. ++ -|
T Consensus        72 i~eAqe~aA~~f----gAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g  146 (557)
T COG1982          72 IKEAQELAARVF----GAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG  146 (557)
T ss_pred             HHHHHHHHHHHh----CCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence            344555555544    543 357889999999999999999999999999999999998888999999988333 22 22


Q ss_pred             --CCCChHHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCc-cccccCC
Q 015890          148 --LHPDADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRK-HCCVEGD  220 (398)
Q Consensus       148 --~~~d~e~l~~~l~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~-~~~~~~~  220 (398)
                        ..++.+.+++.+..++.. +++++++|+. -|++++   +++|.++++..++|+.+|+++   +.+.+.. .+....+
T Consensus       147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~  222 (557)
T COG1982         147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGG  222 (557)
T ss_pred             ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcC
Confidence              357999999988866656 8899988865 799999   899999999999999999999   3433322 2233356


Q ss_pred             cEEEEcccccccCCCcceeEE-EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-----CchHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----GPEWVTERVKDLVR  294 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~-i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~  294 (398)
                      .++++.|.||.++  ++..+. +-.+++-.--.+++.........+.+.....|....-+.     +....++..+..-+
T Consensus       223 ~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~  300 (557)
T COG1982         223 ADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAID  300 (557)
T ss_pred             ceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence            7889999999985  665554 444421011123443333333444444444443333211     12222333555556


Q ss_pred             HHHHHHHHhccCCCCccccCC---------------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890          295 NREIIREALSPLGEGAVKGGE---------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG  353 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~  353 (398)
                      .++.+++...+.+++.+..+.                     +..-+.+..++.+..+..+..+| +++||...-..   
T Consensus       301 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L-~e~gii~e~~~---  376 (557)
T COG1982         301 FRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYL-REHGIIPEETG---  376 (557)
T ss_pred             HHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHH-HHcCCeeeecC---
Confidence            666666666666654443332                     11223455555566788888877 57777765432   


Q ss_pred             CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 ~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                       ...+-+-+.. ...+....++.|.++.+.
T Consensus       377 -d~~~lll~~~-~~gk~~~lv~~L~~f~r~  404 (557)
T COG1982         377 -DYSNLLLFSP-GIGKWQTLVDRLLEFKRR  404 (557)
T ss_pred             -CceeeEEeee-ccchHHHHHHHHHHHHHh
Confidence             2222233322 225555666666666663

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=2.1e-14  Score=125.81  Aligned_cols=336  Identities=17%  Similarity=0.134  Sum_probs=224.0

Q ss_pred             HcCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890           27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        27 ~~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      -+|++++||+... -.+...+++.+.+...+.+.+      .+-|+..+-.-.+.+.+++++    |. .+.|++..|- 
T Consensus        91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G~-E~aivYs~gF-  164 (467)
T KOG1358|consen   91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----GT-EDAIVYSYGF-  164 (467)
T ss_pred             ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----CC-cceeeecccc-
Confidence            3678889988754 455678888888777776643      233655555667889999998    43 4567777666 


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC----------C-CeEE
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----------T-PKLV  168 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----------~-~~~v  168 (398)
                      .++..++.+++++||-|.+.+-..+.....++...-.+.++.+       .|++.++..+.+.+          . -+.|
T Consensus       165 ~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfi  237 (467)
T KOG1358|consen  165 STIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFI  237 (467)
T ss_pred             chhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEE
Confidence            7888899999999999999988877777777766666666612       26677766654221          1 2345


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc----ccCCcEEEEcccccccCCCcceeE
Q 015890          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                      ++..-.-++|.+.|   +.+|.++..+|...+|+||.+ |+-   .|.....    ...+.+++++|+.-+++-.|   |
T Consensus       238 v~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---g  311 (467)
T KOG1358|consen  238 VVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---G  311 (467)
T ss_pred             EEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---c
Confidence            55656677999999   999999999999999999999 443   3332221    12355688999999886554   6


Q ss_pred             EEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890          241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL  320 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  320 (398)
                      ++.++.. --..+++.....-++.+.++....++..++.. .++-.++.+.++.....+...|....+..+.+...+..+
T Consensus       312 Fc~G~~~-i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~  389 (467)
T KOG1358|consen  312 FCAGKSF-IADHQRLSGSGYCFSASLPPYLAGAAIKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPII  389 (467)
T ss_pred             eeeccee-eEeeeeccccceeeeccCchhhhhhHHHHHHH-HhhCcchhhhhhccccccchhhhcCCceEEecCcCCcee
Confidence            6666521 11223444333334445566666666666664 333344666666666777777776554466655557777


Q ss_pred             EeeCCCCCCC-------hHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          321 WARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       321 ~~~~~~~~~~-------~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+.+.+...+       .+++++..+.+ |+.+.....-      .-+..+||++.. .+++|++++.+.|++...++
T Consensus       390 hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~  466 (467)
T KOG1358|consen  390 HLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV  466 (467)
T ss_pred             eeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence            7777653221       23456666544 7777544322      235689999999 89999999999999877654

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.65  E-value=3.7e-13  Score=122.94  Aligned_cols=330  Identities=13%  Similarity=0.100  Sum_probs=208.3

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD  111 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~  111 (398)
                      +|||-+-..--.++++.+++|..    + --.|..++....|++.+++.+.      .+.+++++.++.+..+++..+++
T Consensus        43 ~IDLrSDTgT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G------~E~alpthqGRgaE~Il~~~~~~  111 (467)
T TIGR02617        43 FIDLLTDSGTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFG------YQYTIPTHQGRGAEQIYIPVLIK  111 (467)
T ss_pred             EEECccCCCCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhC------CceEEECCCCchHHHHHHHhhcc
Confidence            55655443222378999999886    1 2358788888899999999883      45688898899999999999998


Q ss_pred             -CCCEEEEeCC-------CCcC-hhhHHHhcCcEEEEeccCC---------CCCCCCChHHHHHhhccCC--CCeEEEEe
Q 015890          112 -AGDSVVMFAP-------YYFN-SYMSFQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVV  171 (398)
Q Consensus       112 -~gd~Vl~~~p-------~~~~-~~~~~~~~g~~~~~~~~~~---------~~~~~~d~e~l~~~l~~~~--~~~~v~i~  171 (398)
                       +|+++++..+       .|+. ....+...|+.+..+ +.+         .....+|++.|++.+++..  .+..+...
T Consensus       112 ~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l-~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~t  190 (467)
T TIGR02617       112 KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV-YTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVAT  190 (467)
T ss_pred             cccccccccccccccceEEEEecchHHHHHcCceeecc-cchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeee
Confidence             6777775443       3233 234567778776664 322         1234789999999998521  12233222


Q ss_pred             -CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e-----------ccCCCccccc----cCCcEEEEcccccccCC
Q 015890          172 -NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCCV----EGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       172 -~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~~----~~~~~i~~~s~sK~~~~  234 (398)
                       ..|.-.|+.+|.+.++++.++|++||+.+++|.+. +           .+.+.+....    ....+.+..|+||.+++
T Consensus       191 lt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA  270 (467)
T TIGR02617       191 ITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV  270 (467)
T ss_pred             EEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC
Confidence             12334688999999999999999999999999987 3           1222221111    02234667799999976


Q ss_pred             C-cceeEEEEccCCcH---HHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890          235 M-GWRVGYIAYPSEVE---GFATQLLKVQ-----DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       235 ~-G~r~G~i~~~~~~~---~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      | |   |++++++  +   ++.++.+...     ..+..+.+.-.+.+++..|.+.  .+++..+..+.    ++|.+.|
T Consensus       271 pvG---g~Lag~d--~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv----~yl~~~L  341 (467)
T TIGR02617       271 PMG---GLLCFKD--DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQV----QYLVNGL  341 (467)
T ss_pred             ccc---ceEEecc--hhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHH----HHHHHHH
Confidence            6 4   6777775  5   4444443321     1223356666677776667652  24455554444    4555555


Q ss_pred             ccCCCCccccCCccEEEEeeC-------CCCCCChHHHHHHHHHhcCeEEecCCCC--C---------C--CCeEEEEec
Q 015890          304 SPLGEGAVKGGEGAIYLWARL-------PEKHLDDFEVVRWLAHRHGVVVIPGGAC--G---------C--RGHLRISFG  363 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~--~---------~--~~~iRi~~~  363 (398)
                      .+.|. -+.. .||.-++++-       |...-.+..+..+|-.+.||...--..+  +         .  -..+|+++.
T Consensus       342 ~~~Gv-pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip  419 (467)
T TIGR02617       342 EEIGV-VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP  419 (467)
T ss_pred             HhCCC-cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence            55554 2233 4455555532       2111235567777777889875433322  1         0  157999988


Q ss_pred             C--CCHHHHHHHHHHHHHHHHHH
Q 015890          364 G--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       364 ~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +  -|.++++...+++....++-
T Consensus       420 Rrvyt~~h~d~v~~~~~~~~~~~  442 (467)
T TIGR02617       420 RATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_pred             cccccHhHHHHHHHHHHHHHhhh
Confidence            8  58899999999998877653

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.64  E-value=3.6e-13  Score=117.15  Aligned_cols=357  Identities=17%  Similarity=0.137  Sum_probs=231.3

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhh----
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQE----   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~----   84 (398)
                      +.+.+.+.+.-+.+..+....-+.|--..|.  .+..|.+|+-..+.+.-.-+|+-  -.|-.++.+.+....+++    
T Consensus        21 l~~~DPev~~ii~~Ek~RQ~~gieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALea   98 (477)
T KOG2467|consen   21 LEEVDPEVHDIIEKEKERQKRGIELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEA   98 (477)
T ss_pred             hhhcChHHHHHHHHHHHhhhcceeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHH
Confidence            4456667777677777666677777766554  46888998888776532233422  134455666655544433    


Q ss_pred             cCCCCC----cEEEecChHHHHHHHHHHhccCCCEEE---EeCCCC--cChhhHHHhcCc-----EEEEeccCCCCCCCC
Q 015890           85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVV---MFAPYY--FNSYMSFQMTGV-----THILVGPCSSKTLHP  150 (398)
Q Consensus        85 ~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl---~~~p~~--~~~~~~~~~~g~-----~~~~~~~~~~~~~~~  150 (398)
                      ++++++    ||..-+|+ -|++.+..+++.|+++|.   +|+.+|  ++|..--+...+     +-.++ .+++....+
T Consensus        99 F~ldp~kWGVNVQp~SGS-PANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPY-kv~~~TG~I  176 (477)
T KOG2467|consen   99 FGLDPEKWGVNVQPYSGS-PANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPY-KVDPSTGYI  176 (477)
T ss_pred             hCCCHHHCceeeccCCCC-chhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCce-eeCCCCCce
Confidence            577654    56655655 899999999999999987   455555  233321122222     22233 456666679


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s  227 (398)
                      |.|.||+.-..-. |++++....  .-...++   ..++.++|.+.|.+++.|-+|   +...+.-.+++.+ -+|++.+
T Consensus       177 DYD~Le~~A~~fr-Pk~iiaG~S--aY~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTT  249 (477)
T KOG2467|consen  177 DYDKLEKTATLFR-PKLIIAGTS--AYSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTT  249 (477)
T ss_pred             ehHHHHHHHHhcC-CcEEEeccc--cchhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeecc
Confidence            9999998766433 588875422  2234455   788888888999999999999   4444444444433 2477889


Q ss_pred             cccccCCCcceeEEEEccCCcH------------HHHHHHHH-hhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLK-VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLV  293 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~  293 (398)
                      .+|++  -|.|.|.|..+.+.+            ++-++++. .......++....+++++-+|.. ....+..+.++..
T Consensus       250 THKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~  327 (477)
T KOG2467|consen  250 THKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVL  327 (477)
T ss_pred             ccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHH
Confidence            99987  588889887765321            12233322 22233345666667777777765 4566788999999


Q ss_pred             HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC----
Q 015890          294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG----  364 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~----  364 (398)
                      ++.+.+.+.|...|...+.++.+...+.+++.....+. .-++++++.-+|.+.--..++     .|+.||++...    
T Consensus       328 ~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dG-arvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsR  406 (477)
T KOG2467|consen  328 KNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDG-ARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSR  406 (477)
T ss_pred             HHHHHHHHHHHHcCceEecCCccceEEEEeccccCCch-HHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhccc
Confidence            99999999999988855666665677788887655454 334555666677764444333     47899998443    


Q ss_pred             -CCHHHHHHHHHHHHHHH
Q 015890          365 -LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~  381 (398)
                       ..++|+++..+-|.+++
T Consensus       407 G~~e~df~~v~~fi~~av  424 (477)
T KOG2467|consen  407 GFGEEDFEKVADFIDRAV  424 (477)
T ss_pred             CccHHHHHHHHHHHHHHH
Confidence             35677877777776665

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.61  E-value=6.6e-12  Score=121.56  Aligned_cols=340  Identities=12%  Similarity=0.051  Sum_probs=212.8

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC----------
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA----------  112 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~----------  112 (398)
                      +.+|.++..+...+.++....|..++....+++.+.+++.+..|.+...-++|+|||.|+..++...++.          
T Consensus        94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~  173 (608)
T TIGR03811        94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV  173 (608)
T ss_pred             CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence            3567777766666777667777778888999999999999999987666678999999999877664321          


Q ss_pred             ------------------------------------------C------CEEEEeCCCCcChhhHHHhcCc---EEEEec
Q 015890          113 ------------------------------------------G------DSVVMFAPYYFNSYMSFQMTGV---THILVG  141 (398)
Q Consensus       113 ------------------------------------------g------d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~  141 (398)
                                                                |      -+++++...|+++..++..+|+   .++.+ 
T Consensus       174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V-  252 (608)
T TIGR03811       174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV-  252 (608)
T ss_pred             cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe-
Confidence                                                      0      0578888889999999999998   58888 


Q ss_pred             cCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEeece--ec---cC
Q 015890          142 PCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTY--FM---YD  210 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~--~livDe~~--~~---~~  210 (398)
                      |++++ +.+|++.|++.++    .+..+-+|+.+.++..+|.+-|.++|.+|++.++++|+  ++++|.+|  +.   +.
T Consensus       253 pvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~  331 (608)
T TIGR03811       253 PVDSN-YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFL  331 (608)
T ss_pred             ecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhc
Confidence            88765 5899999999886    23324567777889999999994444444443477898  69999999  21   11


Q ss_pred             C-----Ccc--------------------cc-----c--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          211 G-----RKH--------------------CC-----V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       211 ~-----~~~--------------------~~-----~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      .     .+.                    ..     .  -...+=++..+||++. ..+.+|.++.++  +.+.+.+...
T Consensus       332 ~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd--~~~~~~~~~~  408 (608)
T TIGR03811       332 DEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQD--IRMRDVISYF  408 (608)
T ss_pred             cccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeC--HHHHHHHhcC
Confidence            1     000                    00     0  0122234568999985 567889988887  4444433211


Q ss_pred             hc-------c-------CCCCcchHH--HHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHHhccCC------CCcc--
Q 015890          259 QD-------N-------IPICASIIS--QHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLG------EGAV--  311 (398)
Q Consensus       259 ~~-------~-------~~~~~~~~~--~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~--  311 (398)
                      ..       .       .....+.+.  ..++..+++.   +.+.+.+..++..+.++++.+.|+..+      .+.+  
T Consensus       409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~  488 (608)
T TIGR03811       409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP  488 (608)
T ss_pred             cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence            00       0       011112222  2333333332   456788888999999999998887742      2333  


Q ss_pred             ccCCccEEEEeeCCCCCCC----hHHHHHHHHHhcC----------eEEecCCCC----C-----------CC-------
Q 015890          312 KGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHG----------VVVIPGGAC----G-----------CR-------  355 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~g----------i~v~~g~~~----~-----------~~-------  355 (398)
                      ..++..+.+++++.....+    ..++-.++.++..          +.+......    +           ..       
T Consensus       489 ~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~  568 (608)
T TIGR03811       489 LTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRA  568 (608)
T ss_pred             cCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccC
Confidence            3333366666665432222    2223333332211          112111100    0           00       


Q ss_pred             ---CeEEEEecC---CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          356 ---GHLRISFGG---LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       356 ---~~iRi~~~~---~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                         ..+|-++..   .+.+.++..++.|++++++..++
T Consensus       569 ~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~~  606 (608)
T TIGR03811       569 GKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLEK  606 (608)
T ss_pred             CceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHHh
Confidence               257777665   25577888999998888876653

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.60  E-value=1.9e-12  Score=111.25  Aligned_cols=346  Identities=14%  Similarity=0.065  Sum_probs=222.7

Q ss_pred             hHHHHHHHHHHcCCCeEEcCCccCCCCC---cHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSLAQGVVYWQP---PKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~---~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      ..+..++..+....+.+.|+.++-...+   ..+..++..+.........+. ......++-+.+.+.+..+.|..+.++
T Consensus        17 dpl~~lr~~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Ev   96 (407)
T COG3844          17 DPLAKLRDRFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEV   96 (407)
T ss_pred             CchhhhHhhccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCce
Confidence            4466677778777889999877644432   233344444433322111111 133445666788888888889999999


Q ss_pred             EEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhh-----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      +++.+++--++.++.+.+  .+|++||+++..-++...     .+...+..   +   +- -..+.++++++.+++..  
T Consensus        97 vv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~---~~-~~~~~P~~~~~~~~dd~--  167 (407)
T COG3844          97 VVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y---DL-EGVIAPRALEEAITDDV--  167 (407)
T ss_pred             EEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c---cc-eeeeChHHHHHhhccce--
Confidence            999999988888888765  458899998766554332     22332221   1   11 12456778999998775  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIA  243 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~  243 (398)
                      .+|++++.+.-||+.++   +.+|-++++++|++++.|=+| .+.-  +......+.++-+++..|.++. ||-..|..+
T Consensus       168 AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav--p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v  242 (407)
T COG3844         168 AVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV--PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFV  242 (407)
T ss_pred             EEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc--ceeecccCCCeeeeeeceeccCCCCCceeEEe
Confidence            99999999999999999   999999999999999999888 3321  2222234455778888999852 554444444


Q ss_pred             ccCCcHHHHHHHHH-------------------hhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHh
Q 015890          244 YPSEVEGFATQLLK-------------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       244 ~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      .++..+.....+..                   .......+.+..+.+++..+|+... -.+.+.+++.-...+.+.+.+
T Consensus       243 ~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLv  322 (407)
T COG3844         243 APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELV  322 (407)
T ss_pred             ccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHH
Confidence            44211111111100                   0111223556677777777777522 226677777777778887777


Q ss_pred             ccC-C--CCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHH
Q 015890          304 SPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAA  374 (398)
Q Consensus       304 ~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~  374 (398)
                      +.. +  +..+..|.    -|..+.+..+    ...++++.| .++||..    .|..++.+|++++-  .+-.|+=.++
T Consensus       323 Ea~~~~~~l~l~tPr~~~~rGsqvS~~hp----~~~~V~qaL-i~rGVig----D~R~P~vlRfgftPlY~~~~DVw~AV  393 (407)
T COG3844         323 EARCEYYGLTLVTPRAHEERGSQVSLYHP----HGYQVMQAL-IDRGVIG----DFREPDVLRFGFTPLYVSFVDVWDAV  393 (407)
T ss_pred             HhccccCCcEEeccchhhhccceeeEecC----cHHHHHHHH-HHcCccc----cccCCCeeeecCccceechhHHHHHH
Confidence            642 1  22444332    2455555666    366788877 4899965    34578999999876  6788999999


Q ss_pred             HHHHHHHHHHh
Q 015890          375 DRLRRGLEELV  385 (398)
Q Consensus       375 ~~l~~~~~~~~  385 (398)
                      +.|.++++...
T Consensus       394 ~~L~evL~t~a  404 (407)
T COG3844         394 DALEEVLDTLA  404 (407)
T ss_pred             HHHHHHHHhhc
Confidence            99999988754

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.59  E-value=3.2e-12  Score=114.06  Aligned_cols=310  Identities=18%  Similarity=0.129  Sum_probs=196.5

Q ss_pred             CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEe--cChHHHHHH---HHHHh-ccCC----CEEEEeCCCCcChh
Q 015890           61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVT--AGANQAFVN---IVLTL-CDAG----DSVVMFAPYYFNSY  127 (398)
Q Consensus        61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~--~g~t~a~~~---~~~~l-~~~g----d~Vl~~~p~~~~~~  127 (398)
                      .+.|.|.   +|..++...+.+||++..|.+.  |.+.  +|+ ++=..   +++.. ...|    +.+|+|+..|....
T Consensus        95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGA-qGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP  171 (496)
T COG1003          95 IHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGA-QGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP  171 (496)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCc-chhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence            5666663   6788899999999999888654  4444  333 32222   22222 2233    58999999998888


Q ss_pred             hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-
Q 015890          128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-  206 (398)
Q Consensus       128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-  206 (398)
                      ..+...|++++.+ +.+++| .+|+|+|++++.++.  +++.|++||. .|..  .+.|.+|+++.+++|..+..|.+- 
T Consensus       172 ASAam~G~~VV~V-~~~~~G-~VDlddLk~k~~~~~--AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANl  244 (496)
T COG1003         172 ASAAMAGFKVVVV-KCDENG-NVDLDDLRAKAEDNL--AALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANL  244 (496)
T ss_pred             hhHhhcCceEEEE-ecCCCC-CccHHHHHHHhccce--eEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcch
Confidence            8899999999999 888776 689999999999775  9999999975 5665  567999999999999999999988 


Q ss_pred             eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHH-----hh---------------ccC
Q 015890          207 FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK-----VQ---------------DNI  262 (398)
Q Consensus       207 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~-----~~---------------~~~  262 (398)
                      -..-|.-...+. +.+++=..++|.|+.    +|...|-+.+.   ..++.-+-.     ..               ...
T Consensus       245 NA~vG~~rPGd~-G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk---~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a  320 (496)
T COG1003         245 NAIVGLARPGDM-GFDVVHLNLHKTFCIPHGGGGPGAGPVGVK---AHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAA  320 (496)
T ss_pred             hhhhcccccccc-ccceEEeecccccccCCCCCCCCCCceehH---hhccccCCCCcccCCCccccccCCCCccceeecc
Confidence            111222222111 223555578898853    34555666655   333322211     00               001


Q ss_pred             CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCC----CCCCChHHHH
Q 015890          263 PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLP----EKHLDDFEVV  335 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~  335 (398)
                      .++ |......+...+.. +.+.+++..+..--+++++...|+..-. ..+.+.  ...=+.++..    +...+..++.
T Consensus       321 ~~G-s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~-~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA  398 (496)
T COG1003         321 PYG-SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYP-VPYTGENRVAHECILDARPLKKETGVRALDVA  398 (496)
T ss_pred             ccC-cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCc-cccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence            112 22222333333332 4566777777777788999999986322 122222  1222344443    2335788999


Q ss_pred             HHHHHhcCeEEecCCCC-CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          336 RWLAHRHGVVVIPGGAC-GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      ++|+ ++|+.-..-++. --.+.+=|=..- .+.++++++++++.++.++..+.
T Consensus       399 KrLl-D~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~  451 (496)
T COG1003         399 KRLL-DYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV  451 (496)
T ss_pred             HHHH-hcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9998 899987544332 134555555444 45677888888888877776543

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.56  E-value=3.3e-13  Score=114.43  Aligned_cols=345  Identities=14%  Similarity=0.117  Sum_probs=204.5

Q ss_pred             cCCCeEEcCCccCCCC-CcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~-~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      +|..++|--.+.-..+ .+|++.+|...++.... ...+ ..   .++-+........+-+  -+.++|++++++|++++
T Consensus        45 ~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RF-lh---d~lv~cA~~l~stlPe--Lsvc~F~NSGSEANDLA  118 (452)
T KOG1403|consen   45 EGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRF-LH---DELVQCARTLTSTLPE--LSVCFFVNSGSEANDLA  118 (452)
T ss_pred             CcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchh-hH---HHHHHHHHHHhhcCCC--ceEEEEecCCchhhHHH
Confidence            4555655544432222 58999999888876422 1122 22   2233333332222111  45689999999999999


Q ss_pred             HHHhcc--CCCEEEEeCCCCcChhhHH--------Hhc-C---cEEEEeccCCCC--C-CC-----------CChHHHHH
Q 015890          106 VLTLCD--AGDSVVMFAPYYFNSYMSF--------QMT-G---VTHILVGPCSSK--T-LH-----------PDADWLEK  157 (398)
Q Consensus       106 ~~~l~~--~gd~Vl~~~p~~~~~~~~~--------~~~-g---~~~~~~~~~~~~--~-~~-----------~d~e~l~~  157 (398)
                      ++...+  +-..||+.+..|+++....        ..- +   .+.+.+.|.++.  | +.           .-.+.+++
T Consensus       119 LRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~  198 (452)
T KOG1403|consen  119 LRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKE  198 (452)
T ss_pred             HHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHH
Confidence            987642  2235666677787755322        100 1   122322232210  0 11           11344555


Q ss_pred             hhc----cCCCCeEEEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccccCCcEEEEcccc
Q 015890          158 TLE----TKPTPKLVSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCVEGDHVVNLFSFS  229 (398)
Q Consensus       158 ~l~----~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~~~~~~i~~~s~s  229 (398)
                      .++    ....+++.+..+-++..|.++|+ ...+.+++..+.+|...|.||++  |+.-|... ....++.+..+-++.
T Consensus       199 I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg  278 (452)
T KOG1403|consen  199 ICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG  278 (452)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheec
Confidence            554    33335566666778889987655 47899999999999999999999  66555432 233344444566899


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhc-c
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALS-P  305 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~-~  305 (398)
                      |-+| .|.+++.++..   +++.+.+..  .....+++.|+.+.+++.+.++.. ++.+....++.-.....+...++ +
T Consensus       279 KpmG-NGhPVa~Vatt---keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~k  354 (452)
T KOG1403|consen  279 KPMG-NGHPVAAVATT---KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQK  354 (452)
T ss_pred             ccCC-CCCeeeEEecc---HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence            9998 99999999999   888888865  334457888999999888888752 23333333333333222222222 2


Q ss_pred             CCCCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          306 LGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                      ...+--+.+. |+|+-+++-+..       ..+.-++.+|-+.++|.+..-..  ..+.+.|-... .+++..++.+..|
T Consensus       355 h~~IGDvRGv-GLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~l  431 (452)
T KOG1403|consen  355 HECIGDVRGV-GLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGL  431 (452)
T ss_pred             ccceeccccc-eEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHH
Confidence            3333333344 788888774322       12334566777777888865321  13446665333 5788888888888


Q ss_pred             HHHHHHHh
Q 015890          378 RRGLEELV  385 (398)
Q Consensus       378 ~~~~~~~~  385 (398)
                      .+++.-+.
T Consensus       432 d~iLT~me  439 (452)
T KOG1403|consen  432 DEILTVME  439 (452)
T ss_pred             HHHHHHHH
Confidence            88877443

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.55  E-value=8.3e-12  Score=125.07  Aligned_cols=331  Identities=11%  Similarity=0.100  Sum_probs=210.5

Q ss_pred             hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHHHhh-cCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKELV-WDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~~~~-~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      ...+.+++....+..+.+|- .|.-+...|+.+.+.+.+-- +-...+.|++  ++|.-+..-.+...+.++.|.+..|.
T Consensus        50 e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNa  129 (939)
T TIGR00461        50 EALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANA  129 (939)
T ss_pred             HHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhh
Confidence            44455555655555554544 45555556788876655421 1111344443  35666666666777888889998898


Q ss_pred             EEecChHHHHHHHHHHhc---cCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      -+..++|++.++++.+..   +++++|++++..|+.+...+    +..|++++.+          |+++|++.+  +  .
T Consensus       130 Sl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~--~  195 (939)
T TIGR00461       130 SLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--D--V  195 (939)
T ss_pred             hccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--C--E
Confidence            999999999998877753   23479999999998877544    4778888776          344566655  2  4


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCC----CcceeEE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGY  241 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~  241 (398)
                      .++++.+|++ .|.+.+   +++|+++++++|.+++++.-........... ..+.+|++++ +|.||.    +|.-.|+
T Consensus       196 ~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg-e~GaDi~vg~-~q~fg~p~g~GGP~aG~  269 (939)
T TIGR00461       196 FGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMALTLLTPPG-HYGADIVLGS-SQRFGVPMGYGGPHAAF  269 (939)
T ss_pred             EEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHhCCcCCHH-HcCCcEEeeC-CCccCCCCCCCCCceee
Confidence            7888888865 788876   9999999999999999954333322222222 2234455554 344443    3555788


Q ss_pred             EEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHHHHHHH--HhcCCchHHHHHHHH
Q 015890          242 IAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQHLALY--SLQTGPEWVTERVKD  291 (398)
Q Consensus       242 i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~  291 (398)
                      +.++   +++...+                            ++.+...+.|.+....+..+.  +.-.+.+.+++..++
T Consensus       270 ~a~~---~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~  346 (939)
T TIGR00461       270 FAVK---DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARR  346 (939)
T ss_pred             eeec---HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence            8877   4444433                            111111222333333332222  222356778888999


Q ss_pred             HHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHH
Q 015890          292 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC  370 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~  370 (398)
                      ...+..++.+.|++.|. ++..+.-..-+.++++.  .+..++.++++ ++||.++..    ..+.+++|+.- .+.+|+
T Consensus       347 ~~~~a~~l~~~L~~~G~-~~~~~~fF~~~~v~~~~--~~~~~i~~~~~-~~gi~l~~~----~~~~i~~s~~E~~t~~di  418 (939)
T TIGR00461       347 IHSLTSILANGLENDPH-ELINKTWFDTLTVKVGN--GISSELLKAAE-EFNINLRAV----DTTTVGIALDETTTKADV  418 (939)
T ss_pred             HHHHHHHHHHHHHhCCC-cccCCCccceEEEEeCC--CCHHHHHHHHH-HCCCeeeec----CCCEEEEEeecCCCHHHH
Confidence            99999999999998665 55443212224445531  24677888775 889998763    35689999998 889999


Q ss_pred             HHHHHHHH
Q 015890          371 KAAADRLR  378 (398)
Q Consensus       371 ~~~~~~l~  378 (398)
                      +.+++.+.
T Consensus       419 ~~l~~~~~  426 (939)
T TIGR00461       419 ENLLKVFD  426 (939)
T ss_pred             HHHHHHhc
Confidence            99999885

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.50  E-value=6.4e-12  Score=115.55  Aligned_cols=332  Identities=16%  Similarity=0.172  Sum_probs=176.2

Q ss_pred             hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHH-HhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVK-ELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~-~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      ...+.+.+....+.....|- .|.-....|+.+.+.+. +.-+-...+.|++  ++|.-+..-.+...+.++.|.+.-|.
T Consensus        51 e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNa  130 (429)
T PF02347_consen   51 ELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANA  130 (429)
T ss_dssp             HHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-S
T ss_pred             HHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCC
Confidence            34444555544433333332 23333345565555233 2221111334444  45666666677777888889887777


Q ss_pred             EEecChHHHHHHHHHHhc---cCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      -+-.+++++-++++.+..   ++.++|+++...|+.+...+    ...|++++.+ +.++.+. .|        ++  .+
T Consensus       131 Slyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~-~~~~~~~-~d--------~~--~~  198 (429)
T PF02347_consen  131 SLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV-PLDEDGT-TD--------DD--DT  198 (429)
T ss_dssp             EBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE--BBTTCS-B---------ST--TE
T ss_pred             CCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe-cccccCC-cc--------cc--Ce
Confidence            788888888887766653   23359999999998887744    4468899888 7665543 23        23  36


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC----CcceeE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVG  240 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G  240 (398)
                      .+|++.+||+ .|.+-+   +++|+++++++|.++++ .+- ....+...+.. .+.+|++++ +|.||.    +|...|
T Consensus       199 a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge-~GADI~vg~-~Q~fg~p~~~GGP~~G  271 (429)
T PF02347_consen  199 AAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADPNALGGLKSPGE-YGADIVVGE-HQTFGIPMGFGGPGAG  271 (429)
T ss_dssp             EEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG-GT-SEEEEC-CTTTT---CCC-S--E
T ss_pred             EEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh-cCccEEeeC-CCCCcccCCCCCCCee
Confidence            9999999975 788877   99999999999999988 565 44434333322 334466665 777653    456678


Q ss_pred             EEEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHH--HHHHHHhcCCchHHHHHHH
Q 015890          241 YIAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQ--HLALYSLQTGPEWVTERVK  290 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~  290 (398)
                      ++.+++   +++..+                            ++.+.....|.+....  .++.++.-.+.+.+++..+
T Consensus       272 ~~a~~~---~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~  348 (429)
T PF02347_consen  272 FFAVRE---DLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAE  348 (429)
T ss_dssp             EEEE-G---GGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEhh---hhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            888874   443332                            2222223344444333  3333333346688999999


Q ss_pred             HHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       291 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      ....++.++.+.|++.....+..+.--.++......  ....++.++.. ..|+...    +...+++-+|+.- .+.+|
T Consensus       349 ~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~--~~~~~l~~~~~-~~gl~~~----~~~~~~~li~~TE~~t~ed  421 (429)
T PF02347_consen  349 RIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD--KEVEELLKRGI-EGGLNLR----YPDDGALLICVTETRTKED  421 (429)
T ss_dssp             HHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS---HHHHHHHHTT-----EEEG----GG-SSEEEEE--TT--HHH
T ss_pred             HHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc--HHHHHHHHHHH-hcCCCcc----ccCCCeEEEEccCCCCHHH
Confidence            999999999999998733233333212233333321  11222333332 3443331    2235588888887 67788


Q ss_pred             HHHHHHHH
Q 015890          370 CKAAADRL  377 (398)
Q Consensus       370 ~~~~~~~l  377 (398)
                      +++++++|
T Consensus       422 id~lv~~f  429 (429)
T PF02347_consen  422 IDRLVEAF  429 (429)
T ss_dssp             HHHHHH--
T ss_pred             HHHHHhcC
Confidence            88887764

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.50  E-value=1.9e-11  Score=110.22  Aligned_cols=336  Identities=14%  Similarity=0.118  Sum_probs=214.0

Q ss_pred             CCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhc---c
Q 015890           36 AQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC---D  111 (398)
Q Consensus        36 ~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~---~  111 (398)
                      ..+...+. +++..+-+.+.+..-....-...++..++..+...+++..++.+++ -=..|.|+|+++..+-....   .
T Consensus        85 vS~~v~~~-~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~  163 (491)
T KOG1383|consen   85 ASGVVYWG-EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRK  163 (491)
T ss_pred             eeEEEecC-CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHH
Confidence            33444444 4445444444444311111112356677888888888888866543 23456888888555444421   1


Q ss_pred             --CC---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          112 --AG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       112 --~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                        .|   ..++.+...+..+...++-+++++..+ |.++..+.+|+..+.+.+++++  ..++.+.|+.|+|.+-+   +
T Consensus       164 ~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V-~~~~~~~~~D~~k~~~~i~eNt--i~lv~~~~~~p~G~~e~---v  237 (491)
T KOG1383|consen  164 AQKGIDKPNIVTPQNVHAAFEKAARYFEVELREV-PLDEGDYRVDPGKVVRMIDENT--IMLVGSLPNFPTGEIED---V  237 (491)
T ss_pred             hccCCCCccccchHHHHHHHHHHHhhEEEEEEee-eccccceEecHHHHHHHhccce--EEEEEEcCCCCccchhh---H
Confidence              22   368888888888999999999999999 9998889999999999999997  88888899999999877   8


Q ss_pred             HHHHHHHHH-cCCEEEEeece--eccC----CCccccccCCcEEEE-cccccccCCCcceeEEEEccCCcHHHH------
Q 015890          187 KRISDLCKA-AGSWLVVDNTY--FMYD----GRKHCCVEGDHVVNL-FSFSKAYGMMGWRVGYIAYPSEVEGFA------  252 (398)
Q Consensus       187 ~~i~~l~~~-~~~~livDe~~--~~~~----~~~~~~~~~~~~i~~-~s~sK~~~~~G~r~G~i~~~~~~~~~~------  252 (398)
                      ++|.++..+ +++.+++|.+-  |...    ......+..+.+..+ .+-|| +|+.--..+|++-++  +++.      
T Consensus       238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~--k~~~~~q~~~  314 (491)
T KOG1383|consen  238 EKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRN--KELLPHQLFF  314 (491)
T ss_pred             HHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccce-eeeeecCcEEEEEcc--cccccceEEE
Confidence            889998888 99999999887  3321    111111111222222 23455 455444478988775  3322      


Q ss_pred             --HHHHHhhccCCCC---cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          253 --TQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       253 --~~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                        +++.......+.+   ++.-..++-+.++..+.+.+.+..+.+.+....+++.+++.+.+.+++.+  .+.++-+...
T Consensus       315 ~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp--~vs~~~~~s~  392 (491)
T KOG1383|consen  315 HTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP--LVSFILFGSN  392 (491)
T ss_pred             eccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC--cEEEEEccCC
Confidence              1111111111111   12222222333444467778899999999999999999998887887654  3333333333


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      ..+-.++-+. +++.|..+..-.   .|..+.+++..  ..++-.++++..|.++++++...
T Consensus       393 ~~~i~elsd~-l~~~GW~lnalq---~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~  450 (491)
T KOG1383|consen  393 DVNIFELSDL-LRKKGWILNALQ---FPAAIHICVTRVHAREDVADRFVADIRKVVEELKSL  450 (491)
T ss_pred             ccchhhhhHH-HHhcCcCccccC---CCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence            3455666664 468898875543   34466666655  34455788999999999888653

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.36  E-value=2.1e-10  Score=103.16  Aligned_cols=219  Identities=15%  Similarity=0.094  Sum_probs=154.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEE-----
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVV-----  117 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl-----  117 (398)
                      .++++++++...+.......|.-..+...-  ++...-..+.++. .+.++++++.+.|+..++.++..++..|+     
T Consensus        39 ~~~e~iea~~~~~~~~v~Le~~l~~g~~~~--R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~l  116 (395)
T COG1921          39 YSPEAIEAMKEAMRAPVELETDLKTGKRGA--RLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGEL  116 (395)
T ss_pred             CCHHHHHHHHHHhcccceeeeecccchhhH--HHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccc
Confidence            579999999998876543345444333222  2222222223443 67899999999999999999987544443     


Q ss_pred             EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHHHHH
Q 015890          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT--YIPERLLKRISDLCKA  195 (398)
Q Consensus       118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~--~~~~~~l~~i~~l~~~  195 (398)
                      ++ +++++..+..+..|++++.+ -..   ..-...+++.++.+++  ++++=.+-+|. |.  ..+   +++++++|++
T Consensus       117 V~-gg~~~v~d~~~~aG~~l~Ev-G~t---n~t~~~d~~~AIne~t--a~llkV~s~~~-~f~~~l~---~~~l~~ia~~  185 (395)
T COG1921         117 VE-GGAFRVPDIIRLAGAKLVEV-GTT---NRTHLKDYELAINENT--ALLLKVHSSNY-GFTGMLS---EEELVEIAHE  185 (395)
T ss_pred             cc-CCCCChhHHHHHcCCEEEEe-ccc---CcCCHHHHHHHhccCC--eeEEEEeeccc-ccccccc---HHHHHHHHHH
Confidence            33 67788999999999999887 222   1347889999999987  55443333332 33  244   7889999999


Q ss_pred             cCCEEEEeece-eccC--CCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHH
Q 015890          196 AGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH  272 (398)
Q Consensus       196 ~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  272 (398)
                      +|+++++|.+. ..-+  .........+.+++++|-.|.+|  |.+.|.++++   +++++++++......+....+..+
T Consensus       186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk---KelI~~lq~~~l~Ralrv~K~tla  260 (395)
T COG1921         186 KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGK---KELIEKLQSHPLKRALRVDKETLA  260 (395)
T ss_pred             cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcC--CCccceEech---HHHHHHHHhhhhhhhhhcCcHhHH
Confidence            99999999887 2211  11112222345688899999996  8889999999   899999988777677788888888


Q ss_pred             HHHHHhcC
Q 015890          273 LALYSLQT  280 (398)
Q Consensus       273 ~~~~~l~~  280 (398)
                      +..++|+.
T Consensus       261 ~l~~aLe~  268 (395)
T COG1921         261 ALEAALEL  268 (395)
T ss_pred             HHHHHHHH
Confidence            88888875

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.34  E-value=7e-09  Score=93.11  Aligned_cols=338  Identities=15%  Similarity=0.111  Sum_probs=205.3

Q ss_pred             hHHHHHHHHHHcCCCeEEcCC-ccCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHhhhcCCCCC
Q 015890           17 PIMVQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKS   90 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~-g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~~~~~~~~~l~~~l~~~~~~~~~   90 (398)
                      ..++++++....++.+.+|-. |.-+.-.|+.+...+.+.  ..+.+.|.|     ++|.-+..-.....+..+.|.+..
T Consensus        61 e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA  138 (450)
T COG0403          61 EALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA  138 (450)
T ss_pred             HHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc
Confidence            445555555555555555543 444555677777454331  223444443     345555444555567777798888


Q ss_pred             cEEEecChHHHHHHHHHHhcc---CCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890           91 SVMVTAGANQAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        91 ~v~~~~g~t~a~~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      |--+--++|++-++++.+..-   +.++++++...|+.+...++.    .|.+++.. +.+      |++.+++. ++..
T Consensus       139 NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~-~~~------d~~~l~~~-~~~~  210 (450)
T COG0403         139 NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV-DAD------DLDDLESA-DDGD  210 (450)
T ss_pred             cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe-ccc------hhhhhhhc-cccC
Confidence            888888999998888887652   247999999999888876644    34566555 332      77788888 4432


Q ss_pred             CCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEccccc---ccCCCccee
Q 015890          164 TPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSK---AYGMMGWRV  239 (398)
Q Consensus       164 ~~~~v~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK---~~~~~G~r~  239 (398)
                       +.++++..|+. .| ...+   ++++.+.++++|.++++=.--+...-.+ ++...+.+|++++..-   -+|.+|..+
T Consensus       211 -~~gv~vQyP~~-~G~~~~d---~~~l~~~~h~~~al~~v~aDplaL~LL~-pPGe~GADIvvG~~QrfGvPmgfGGPha  284 (450)
T COG0403         211 -VFGVLVQYPNT-FGIVEED---LRALIEAAHSAGALVIVAADPLALGLLK-PPGEFGADIVVGSAQRFGVPMGFGGPHA  284 (450)
T ss_pred             -eEEEEEecCCC-CCccchh---HHHHHHHHhhcCCEEEEEechhHhhccC-CccccCCceEEecCcccCCCcCCCCcce
Confidence             58999999874 56 4444   9999999999999887642112211111 1122345577777543   223356778


Q ss_pred             EEEEccCCcHHHHH----------------------------HHHHhhccCCCCcchHHHHHHHH--HhcCCchHHHHHH
Q 015890          240 GYIAYPSEVEGFAT----------------------------QLLKVQDNIPICASIISQHLALY--SLQTGPEWVTERV  289 (398)
Q Consensus       240 G~i~~~~~~~~~~~----------------------------~l~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~  289 (398)
                      |++.+.+   ++..                            ++++.+...+.|.+....+.++.  +.-.+.+.+.+..
T Consensus       285 g~fA~~~---~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA  361 (450)
T COG0403         285 GYFAVKD---EFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIA  361 (450)
T ss_pred             eeeeEhH---hHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence            8887773   3332                            22333333444444333333222  2223667889999


Q ss_pred             HHHHHHHHHHHHHhccCCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCH
Q 015890          290 KDLVRNREIIREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE  367 (398)
Q Consensus       290 ~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~  367 (398)
                      ++..+...++.+.|++.+. .++.....-.-+.+++++  .....+..+. ...|+-++.-    .++++-+++.- .+.
T Consensus       362 ~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~--~~~~~l~~~~-~~~G~~L~~~----~~~~~~ia~tEt~t~  434 (450)
T COG0403         362 ERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE--EVAEALLAAA-IAGGINLRRV----DADTVLIALTETTTK  434 (450)
T ss_pred             HHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch--hHHHHHHHHH-HhcCCceeee----cCCceEEEeecccCH
Confidence            9999999999999996552 244433212234555553  1234444444 3667776553    24577778777 567


Q ss_pred             HHHHHHHHHHHHH
Q 015890          368 DDCKAAADRLRRG  380 (398)
Q Consensus       368 ~~~~~~~~~l~~~  380 (398)
                      ++++.+++.+...
T Consensus       435 ~~i~~l~~~~~~~  447 (450)
T COG0403         435 EDIDALVAAFGGV  447 (450)
T ss_pred             HHHHHHHHHHhhh
Confidence            7888777776543

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.33  E-value=6e-10  Score=98.22  Aligned_cols=196  Identities=19%  Similarity=0.180  Sum_probs=117.6

Q ss_pred             HHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe---cChHHHHHHHHHHhccCCCEEEE
Q 015890           46 KMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        46 ~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~---~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      ..|++|+.+.--.    .+.++|+..   +.=|+.+.+.+.+.++.+.  -++-   -|+|+|+..++.++++|||+++.
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~  101 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVLRPGDELLS  101 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--TT-EEEE
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcCCCCCeEEE
Confidence            4556655543211    124455543   2345555555555556532  2221   46789999999999999999985


Q ss_pred             -eCCCCcChhh----------HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHH
Q 015890          119 -FAPYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLL  186 (398)
Q Consensus       119 -~~p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l  186 (398)
                       ...-|.....          .++.+|+....+ +..++| .+|.|.+++.+++++  |+|+|... ...+=..++.++|
T Consensus       102 ~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v-~L~~dg-~~D~~~i~~~~~~~t--k~v~IQRSrGYs~R~sl~i~~I  177 (403)
T PF06838_consen  102 ITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV-PLTEDG-TIDWEAIKKALKPNT--KMVLIQRSRGYSWRPSLTIEEI  177 (403)
T ss_dssp             SSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE---B-TTS-SB-HHHHHHHHHTTE--EEEEEE-S-TTSSS----HHHH
T ss_pred             cCCCchhhHHHHhCCCCCCCCChHHhCceeEEE-eecCCC-CcCHHHHHHhhccCc--eEEEEecCCCCCCCCCCCHHHH
Confidence             4555644443          346778888888 777665 689999999999765  99999843 4444446888999


Q ss_pred             HHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc--eeEEEEccCCcHHHHHHHHH
Q 015890          187 KRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       187 ~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +++++++++  .+++++||.+|  |.-.-.+..   -+.+++.+|+=|..| +|+  -.||++++   ++++++...
T Consensus       178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~---vGADl~aGSLIKNpG-GgiAptGGYIaGr---~~lVe~~a~  247 (403)
T PF06838_consen  178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE---VGADLMAGSLIKNPG-GGIAPTGGYIAGR---KDLVERAAY  247 (403)
T ss_dssp             HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG---GT-SEEEEETTSGGG-TTT-SS-EEEEES---HHHHHHHHH
T ss_pred             HHHHHHHHhhCCCeEEEEeCCcceeccccCccc---cchhheeccceeCCC-CCccCcCCEEech---HHHHHHHHh
Confidence            999999875  58999999999  554332222   234589999999987 554  35899999   899887643

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=99.27  E-value=1.5e-09  Score=96.77  Aligned_cols=315  Identities=14%  Similarity=0.132  Sum_probs=191.6

Q ss_pred             hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhcc--------CC-----CEEE-Ee
Q 015890           55 LVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD--------AG-----DSVV-MF  119 (398)
Q Consensus        55 ~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~--------~g-----d~Vl-~~  119 (398)
                      +..+.+.+.|...+.+.-..+.+-..+.+..|.+.. +=++++|++-++..++.+...        .|     +-|+ ..
T Consensus       124 ~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS  203 (510)
T KOG0629|consen  124 STANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS  203 (510)
T ss_pred             hccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec
Confidence            334444666766666665566666666665676653 667788887777777665431        12     2344 45


Q ss_pred             CCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          120 APYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       120 ~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      +-+|++...++..+|+   .++.+ +.++.| .+++++||++|-+    +..|-.|..+..+.--|..-|   |..|+++
T Consensus       204 eesHYSi~kaAa~lg~gtd~c~~v-~t~e~G-km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadi  278 (510)
T KOG0629|consen  204 EESHYSIKKAAAFLGLGTDHCIKV-KTDERG-KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADI  278 (510)
T ss_pred             ccchhhHHHHHHHhccCCceeEEe-cccccC-ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHH
Confidence            7788899999999994   78888 888776 6899999999862    222455666666777788877   9999999


Q ss_pred             HHHcCCEEEEeeceec---cCCC---ccccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----
Q 015890          193 CKAAGSWLVVDNTYFM---YDGR---KHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----  261 (398)
Q Consensus       193 ~~~~~~~livDe~~~~---~~~~---~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~----  261 (398)
                      |++|++|+++|.++.+   .+..   ..... ..+  =+..+.+|.+| .++.++..+.+.  ..+..+.......    
T Consensus       279 C~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~~g-aplqCsa~l~r~--~gll~~Cn~~~A~YLFq  353 (510)
T KOG0629|consen  279 CEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKLMG-APLQCSAFLTRE--EGLLQRCNQMSAIYLFQ  353 (510)
T ss_pred             HHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHhhc-CcchhhHHHHHH--HHHHHhhcccchhhhhc
Confidence            9999999999998811   1111   11111 122  23558899998 678888888874  3455554332210    


Q ss_pred             -------CCCCcchHHHHH-------HHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc--CCccEEEEee
Q 015890          262 -------IPICASIISQHL-------ALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGE-GAVKG--GEGAIYLWAR  323 (398)
Q Consensus       262 -------~~~~~~~~~~~~-------~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~--~~~~~~~~~~  323 (398)
                             ..-+.....|..       ...+++. +...+++.++++.++++++.+.+++.++ ..+..  |+..++.+..
T Consensus       354 ~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~  433 (510)
T KOG0629|consen  354 QDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY  433 (510)
T ss_pred             cCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc
Confidence                   000111112211       2233332 4566899999999999999999998765 33333  4434444333


Q ss_pred             CCCC---CCChH-----------HHHHHHHHhcCeEEecCCCCC-CCCeEEEEecC--CCHHHHHHHHHHHHHH
Q 015890          324 LPEK---HLDDF-----------EVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRG  380 (398)
Q Consensus       324 ~~~~---~~~~~-----------~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~  380 (398)
                      +|+.   ...+.           .+-.+++ ++|-.-..=...+ .++++|+.++.  .+..+++-+++.|...
T Consensus       434 vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  434 VPPSLRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             CchHhccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence            3321   11111           2333444 4444332212121 35789998776  3777888887777653

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.23  E-value=1.4e-10  Score=92.50  Aligned_cols=90  Identities=18%  Similarity=0.361  Sum_probs=72.2

Q ss_pred             CCeEEcCCccCCCC-----------------CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC----CC
Q 015890           30 KNAVSLAQGVVYWQ-----------------PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LY   88 (398)
Q Consensus        30 ~~~~~l~~g~~~~~-----------------~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~   88 (398)
                      .++|+|+.++|.+.                 .|+.+.++..+.      ..|++..|..++|+++++|+.+.++    ++
T Consensus        43 ~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~  116 (153)
T PLN02994         43 QGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVKFD  116 (153)
T ss_pred             CceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccc
Confidence            55999998776332                 223334444331      3488888999999999999998866    46


Q ss_pred             CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC
Q 015890           89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN  125 (398)
Q Consensus        89 ~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~  125 (398)
                      +++|++|+|++++++.++.+++++||.|+++.|+|++
T Consensus       117 pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994        117 ADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             hhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            8899999999999999999999999999999999964

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=99.21  E-value=1.7e-08  Score=91.24  Aligned_cols=318  Identities=14%  Similarity=0.105  Sum_probs=189.5

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhcCCC---------CCcEEEecChHHHHHHHHHHhc-------cCCC------------
Q 015890           63 KYGADEGLPELRDALVKKLNQENKLY---------KSSVMVTAGANQAFVNIVLTLC-------DAGD------------  114 (398)
Q Consensus        63 ~y~~~~~~~~~~~~l~~~l~~~~~~~---------~~~v~~~~g~t~a~~~~~~~l~-------~~gd------------  114 (398)
                      ....++..++++..+.+|+.+..+++         +.-=++..+++++...++.+..       +.+.            
T Consensus       104 tW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l  183 (511)
T KOG0628|consen  104 TWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL  183 (511)
T ss_pred             eeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence            34456788999999999999887653         1123344555577776666532       1221            


Q ss_pred             EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe--EEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK--LVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~--~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      .+...+-+|.+...++...|++...+ +.++ ++.++.+.|+++++++..-.  -++++.--..||.+ .-+++.+|..+
T Consensus       184 V~Y~SDqahssveka~~i~~VklR~l-~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~c-a~D~l~elg~V  260 (511)
T KOG0628|consen  184 VAYCSDQAHSSVEKACLIAGVKLRAL-PTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSC-AFDELEELGPV  260 (511)
T ss_pred             eEEecCcccchHHHhHhhcceeEEEe-eccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccc-ccccHHHhcch
Confidence            24456777778888888888898888 8876 78889999999998432101  12222222234433 33459999999


Q ss_pred             HHHcCCEEEEeecee--ccCCCcccc-ccC--CcEEEEcccccccCCCcceeEEEEccCCc---------HHHHHHH--H
Q 015890          193 CKAAGSWLVVDNTYF--MYDGRKHCC-VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEV---------EGFATQL--L  256 (398)
Q Consensus       193 ~~~~~~~livDe~~~--~~~~~~~~~-~~~--~~~i~~~s~sK~~~~~G~r~G~i~~~~~~---------~~~~~~l--~  256 (398)
                      |+++|+||++|.+|.  .+.-..... ..+  ..+=+-...||++ +--+-+..+...++.         +.+.+.-  .
T Consensus       261 c~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~  339 (511)
T KOG0628|consen  261 CREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG  339 (511)
T ss_pred             hhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhee-EEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence            999999999999991  111111000 000  0011233456655 344445544444320         1111110  0


Q ss_pred             HhhccCCCCcc------hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890          257 KVQDNIPICAS------IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  330 (398)
Q Consensus       257 ~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      .......+..+      +.-.+.....+  +-+.++++.+++.+.++.+.+.+.+-+-+.+..+..--.+++++......
T Consensus       340 ~~~Dyrhwqipl~rRfRSLKlWfv~R~~--Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~  417 (511)
T KOG0628|consen  340 SAPDYRHWQIPLGRRFRSLKLWFVLRSY--GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEI  417 (511)
T ss_pred             cCCCccccccccccchhhHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHH
Confidence            00011111111      11111111111  23556777777777777887777776655666555444566677655556


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .+.+.+++.....|.+.|.+ ..+.-.||++++.  .++++++...+.|.+....+.+.
T Consensus       418 ne~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~  475 (511)
T KOG0628|consen  418 NEALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA  475 (511)
T ss_pred             HHHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence            77888888888889998865 2233469999988  67889999999999998886554

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=99.16  E-value=6.8e-11  Score=105.38  Aligned_cols=247  Identities=17%  Similarity=0.140  Sum_probs=57.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHH-HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPEL-RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY  122 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~-~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~  122 (398)
                      .++++.+++.+.........|.-..|...- ...+.+.+....|  .+..+++++..+|+.+++.++.. |.+|++....
T Consensus        18 l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGe   94 (367)
T PF03841_consen   18 LSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG--AEAALVVNNNAAAVLLALNTLAK-GKEVIVSRGE   94 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-cccccccccc
Confidence            568888888877666554555433322222 2334444554444  45667778887999998888864 5677766543


Q ss_pred             C------cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC--ccCCCHHHHHHHHHHHH
Q 015890          123 Y------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--GTYIPERLLKRISDLCK  194 (398)
Q Consensus       123 ~------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt--G~~~~~~~l~~i~~l~~  194 (398)
                      -      +...+..+..|++.+.+ -...   .-.+++++++++++|  ++++-.+++|..  |..-. -.+++++++++
T Consensus        95 lVeiGgsFRip~vm~~sGa~lvEV-GttN---~t~~~Dye~AI~e~T--a~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~  167 (367)
T PF03841_consen   95 LVEIGGSFRIPDVMRQSGARLVEV-GTTN---RTHLSDYEKAITENT--AALLKVHTSNFRIQGFTGE-VSLEELAELAK  167 (367)
T ss_dssp             -------------------------------------------------------------------------HHHHHHH
T ss_pred             cccccccccccccccccccccccc-cccc---ccccccccccccccc--ccccccccccccccccccc-ccHHHHHHHHh
Confidence            3      33556778888888877 2211   225778999999887  777666666653  22211 13899999999


Q ss_pred             HcCCEEEEeece--e-cc--CC---Cc--cccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          195 AAGSWLVVDNTY--F-MY--DG---RK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       195 ~~~~~livDe~~--~-~~--~~---~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +||+++++|-..  + ..  .+   .+  ......+.+++++|-.|.+|  |...|.++++   +++++++++-.-...+
T Consensus       168 ~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk---k~lI~~lk~~pl~Ral  242 (367)
T PF03841_consen  168 EHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK---KELIEKLKKHPLGRAL  242 (367)
T ss_dssp             HHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE---HHHHHHHHHHHHTTT-
T ss_pred             hcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC---HHHHHHHhhCCCcceE
Confidence            999999999776  1 11  11   11  11223456688999999997  6778999999   8999998765545566


Q ss_pred             CcchHHHHHHHHHhcCCc------------hHHHHHHHHHHHHHHHHHHHhcc
Q 015890          265 CASIISQHLALYSLQTGP------------EWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      -......+++.++|+...            ..+....+.++++++++...|+.
T Consensus       243 rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~  295 (367)
T PF03841_consen  243 RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA  295 (367)
T ss_dssp             B--HHHHHHHHHHHHH-------------------------------------
T ss_pred             eeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            677888888887776411            11233334455555566655554

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.10  E-value=1.1e-07  Score=95.39  Aligned_cols=327  Identities=14%  Similarity=0.073  Sum_probs=196.0

Q ss_pred             hHHHHHHHHHHcCCCeEEcC-CccCCCCCcHHHHHHHHHh-hcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcE
Q 015890           17 PIMVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKEL-VWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSV   92 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~-~g~~~~~~~~~v~~a~~~~-~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v   92 (398)
                      +..+.+++....++.+.+|- .|.-+.-.|+.+.+.+.+- -+-...+.|++  ++|.-+..-.+...+..++|.+..|-
T Consensus        65 e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNA  144 (954)
T PRK12566         65 AALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANA  144 (954)
T ss_pred             HHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhh
Confidence            33444555544444455554 3445555677775655431 11111334443  35555555566666777788887776


Q ss_pred             EEecChHHHHHHHHHHhc-c--CCCEEEEeCCCCcChhhHHH----hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           93 MVTAGANQAFVNIVLTLC-D--AGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~-~--~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                      -+-.++|++-++++.+.. .  +..+|+++...|+.+...++    ..|++++.             +++++.++++  +
T Consensus       145 Sl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~--~  209 (954)
T PRK12566        145 SLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA--V  209 (954)
T ss_pred             hhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC--E
Confidence            677777777776555543 2  24689999999987776554    33445442             2344444443  5


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccc---ccccCCCcceeEE
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSF---SKAYGMMGWRVGY  241 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~---sK~~~~~G~r~G~  241 (398)
                      .+|++.+|+. .|.+-+   +++|.+++++.|.+++ +.+. +.....+.. ...+.+|++++.   +=-+|.+|.-.|+
T Consensus       210 ~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~-~~~d~laL~ll~~P-ge~GADI~vG~~Q~fGvp~~~GGP~ag~  283 (954)
T PRK12566        210 FGALLQYPDT-HGEIRD---LRPLIDQLHGQQALAC-VAADLLSLLVLTPP-GELGADVVLGSTQRFGVPMGYGGPHAAY  283 (954)
T ss_pred             EEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEE-EEeCHHHHhCCCCh-hhcCCcEEeeCCCcCCCCCCCCCCCeee
Confidence            8899998864 788866   9999999999999866 4444 333332222 223445666642   2223334666899


Q ss_pred             EEccCCcHHHHHHH----------------------------HHhhccCCCCcchHHHHHHHHH--hcCCchHHHHHHHH
Q 015890          242 IAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQHLALYS--LQTGPEWVTERVKD  291 (398)
Q Consensus       242 i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~  291 (398)
                      +.++   +++...+                            ++.+...+.|.+....+.++.+  .-.+.+.+++..++
T Consensus       284 ~a~~---~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~  360 (954)
T PRK12566        284 FACR---DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQR  360 (954)
T ss_pred             eeeh---HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            8888   4444333                            2222233344443333333332  22356778888999


Q ss_pred             HHHHHHHHHHHhccCCCCccccCCccEE--EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHH
Q 015890          292 LVRNREIIREALSPLGEGAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  368 (398)
Q Consensus       292 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  368 (398)
                      ...+..++.+.|++.|. ++...  .+|  +.+++.   .+..++..+.+ +.||-++-.    ..+.+.||+.- .+.+
T Consensus       361 ~~~~a~~l~~~l~~~g~-~~~~~--~fF~~~~v~~~---~~~~~~~~~a~-~~~~n~r~~----~~~~~~~s~de~~~~~  429 (954)
T PRK12566        361 VHRLTAILAAGLEAKGI-KRLNR--HFFDTLTLEVG---GAQAAIIESAE-AARINLRIL----GRGRLGVSLDETCDEA  429 (954)
T ss_pred             HHHHHHHHHHHHHhcCC-ccccC--CccceEEEEcc---CCHHHHHHHHH-HCCCeeEEe----CCCeEEEEeCCCCCHH
Confidence            99999999999998664 44322  333  333442   13566666554 788877753    35678899888 7888


Q ss_pred             HHHHHHHHHH
Q 015890          369 DCKAAADRLR  378 (398)
Q Consensus       369 ~~~~~~~~l~  378 (398)
                      |++.++..+.
T Consensus       430 ~~~~~~~~f~  439 (954)
T PRK12566        430 TVARLFDIFL  439 (954)
T ss_pred             HHHHHHHHhc
Confidence            8988888884

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.09  E-value=1e-07  Score=84.35  Aligned_cols=326  Identities=13%  Similarity=0.075  Sum_probs=188.7

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhcCCCCC-cEEEe-cChHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKS-SVMVT-AGANQAFV  103 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~-~g~t~a~~  103 (398)
                      ..+|+.|  |...|+++++.+.+.+.+-...+++      .++...++-+...+.+..+++++.+ .|++. .|+|....
T Consensus         6 ~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~   83 (365)
T COG1932           6 VYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFA   83 (365)
T ss_pred             CCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHH
Confidence            4556655  6667899988887766542111111      2333445555555667777788644 45555 67788888


Q ss_pred             HHHHHhccCCCEEEEeCCCCcCh-hhHHHhcCcEEEEec---cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNS-YMSFQMTGVTHILVG---PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~---~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++..+|+.+...-.+....|... ..-++..+-.+....   .....+.-++++...  +.++.  .-|+.++-.+-+|+
T Consensus        84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~--ayv~~~~NeTi~Gv  159 (365)
T COG1932          84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDND--AYVHFCWNETISGV  159 (365)
T ss_pred             HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCc--cEEEEecCCcccce
Confidence            88888886543202333333221 123444443211110   111233344544433  22222  44777766666787


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      -++.  ...+.     .+.++|.|... ...  .+.....  ..++..+..|.+|..|  ++.++.+   ++++++++..
T Consensus       160 ~v~~--~p~~~-----~~~~~v~D~SS~ils--r~iDvsk--~dviyagaQKnlGpaG--ltvvIvr---~~~l~r~~~~  223 (365)
T COG1932         160 EVPE--LPDIG-----SDGLLVADASSAILS--RPIDVSK--YDVIYAGAQKNLGPAG--LTVVIVR---PDLLERAESY  223 (365)
T ss_pred             EccC--CCCCC-----CCceEEEecccHHhc--CCCChhH--cceEEEehhhccCccc--eEEEEEc---HHHHhccccc
Confidence            6552  22111     13789999766 221  2222222  2377889999999777  7888999   7888877553


Q ss_pred             -------------hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc---cCCccEEE
Q 015890          259 -------------QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK---GGEGAIYL  320 (398)
Q Consensus       259 -------------~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~~~~~~~  320 (398)
                                   ......|++.+..+.....++.  ....++...++-+++.+.|++.+.+.++..-.   .....+.+
T Consensus       224 ~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV  303 (365)
T COG1932         224 TLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNV  303 (365)
T ss_pred             CCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeE
Confidence                         1122234555555555555543  23446777777888899999999887652221   22334556


Q ss_pred             EeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          321 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++.+.... -+..++..+ ++.|+..--|  ....+.+|+++.. .+.++++.+++.++.+.+.
T Consensus       304 ~f~~~~~~-ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~  363 (365)
T COG1932         304 TFTLVDAE-LDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET  363 (365)
T ss_pred             EEEcCcHH-HHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence            66765321 244566655 4677766666  3456679999887 7889888888888877654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.04  E-value=1.1e-06  Score=77.23  Aligned_cols=320  Identities=12%  Similarity=0.105  Sum_probs=197.1

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-----CCEEEE
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----GDSVVM  118 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~-----gd~Vl~  118 (398)
                      .+...+.+|..-     --.|.-+.+.-.|.+++.+.+    |  -+.++.++-+..|=++++..++++     |.+..+
T Consensus        60 ms~~qwaamm~G-----DEAYagsrs~~~L~~avkdif----G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~  128 (471)
T COG3033          60 MTDKQWAAMMRG-----DEAYAGSRSYYALADAVKDIF----G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVA  128 (471)
T ss_pred             ccHHHHHHHhcc-----chhhcccccHHHHHHHHHHhc----C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccc
Confidence            456666666543     234777788888888888887    4  356777877777877777777754     445666


Q ss_pred             eCCCCcChh-hHHHhcCcEEEEeccCCC---------CCCCCChHHHHHhhccCCC--CeEEEEe-CCCCCCccCCCHHH
Q 015890          119 FAPYYFNSY-MSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETKPT--PKLVSVV-NPGNPSGTYIPERL  185 (398)
Q Consensus       119 ~~p~~~~~~-~~~~~~g~~~~~~~~~~~---------~~~~~d~e~l~~~l~~~~~--~~~v~i~-~p~nptG~~~~~~~  185 (398)
                      ++..|+... ...+..|..++-+ ++++         -...+|++.|++.|++-..  +-.|+++ ..|.-.|+-.+.+.
T Consensus       129 ~sN~~FdTTr~h~~~ng~~~~n~-~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n  207 (471)
T COG3033         129 FSNYHFDTTRGHIQINGATPRNV-YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMAN  207 (471)
T ss_pred             cccceecchhHHHHhcCCccccc-cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHh
Confidence            777776544 3445666655544 3332         1235799999999984220  2334444 55667888899999


Q ss_pred             HHHHHHHHHHcCCEEEEeeceec------cCCC-cc---cc-------ccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          186 LKRISDLCKAAGSWLVVDNTYFM------YDGR-KH---CC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~~~------~~~~-~~---~~-------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      ++++.++|++|+++++.|.+.|.      ..-. ..   +.       .++.+ -++-|.-|-- +..+ .|+++.+++.
T Consensus       208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD-~~~mS~KKD~-lvnm-GGfl~~~D~~  284 (471)
T COG3033         208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD-GCTMSAKKDG-LVNM-GGFLCFKDDS  284 (471)
T ss_pred             HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh-hheeeccccc-eecc-ccEEEecCcc
Confidence            99999999999999999987721      1110 00   00       01211 2334555532 2111 2788888731


Q ss_pred             H-HHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890          249 E-GFATQLLKVQ-----DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL  320 (398)
Q Consensus       249 ~-~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  320 (398)
                      - ++...++...     ..+..+.+.-.+.+++..|.+  ..+|+..+..+++    +|.+.|.+.|. .+..|.||.-+
T Consensus       285 ~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~GV-pi~~paGGHav  359 (471)
T COG3033         285 FFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEAGV-PIVQPAGGHAV  359 (471)
T ss_pred             HHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhcCC-eeEecCCCceE
Confidence            0 2444443321     122234455566666666665  2366666666555    45566666665 46667777766


Q ss_pred             EeeCCC-------CCCChHHHHHHHHHhcCeEEecCCCCCC-------------CCeEEEEecC--CCHHHHHHHHHHHH
Q 015890          321 WARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGHLRISFGG--LVEDDCKAAADRLR  378 (398)
Q Consensus       321 ~~~~~~-------~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~~~iRi~~~~--~~~~~~~~~~~~l~  378 (398)
                      +++..+       ..-.+..+..+|-++.||...-...+..             -..+|+++.+  -+.++++..++.++
T Consensus       360 fvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~  439 (471)
T COG3033         360 FVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFK  439 (471)
T ss_pred             EeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHH
Confidence            665432       1123566777788899998876655421             1469999887  47888888888887


Q ss_pred             HHHHH
Q 015890          379 RGLEE  383 (398)
Q Consensus       379 ~~~~~  383 (398)
                      +..++
T Consensus       440 ~l~e~  444 (471)
T COG3033         440 ALKEN  444 (471)
T ss_pred             HHHhc
Confidence            76655

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.98  E-value=1.1e-07  Score=85.90  Aligned_cols=300  Identities=16%  Similarity=0.092  Sum_probs=155.7

Q ss_pred             HHHHHHHHhhhcCCC-CCcEEEecChHH-HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CC-CC
Q 015890           74 RDALVKKLNQENKLY-KSSVMVTAGANQ-AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS-KT  147 (398)
Q Consensus        74 ~~~l~~~l~~~~~~~-~~~v~~~~g~t~-a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~-~~  147 (398)
                      ...+...+-+..|+. ....++.+-+|. ++.+.+.++.  ..++.|+.+.-.+.....++...|++++.+ |. .+ +.
T Consensus        58 tn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV-~~~~~~d~  136 (389)
T PF05889_consen   58 TNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVV-ENVLEGDE  136 (389)
T ss_dssp             HHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE--EEEETTE
T ss_pred             HHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEe-eccCCCCe
Confidence            333333344445664 344556655533 3333444443  456899999999988888999999999888 43 22 22


Q ss_pred             CCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCC--CccccccCCc
Q 015890          148 LHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDG--RKHCCVEGDH  221 (398)
Q Consensus       148 ~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~--~~~~~~~~~~  221 (398)
                      ..-|++.+++.+++ +..+.+.++++.+---|...+  ++++|+++|++||++.++-.|| .  ...-  .......+--
T Consensus       137 l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv  214 (389)
T PF05889_consen  137 LITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV  214 (389)
T ss_dssp             EEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC
T ss_pred             eeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc
Confidence            34478888888873 222456666665544445433  5999999999999999999999 3  1100  0000000112


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchH----HHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW----VTERVKDLVRNRE  297 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~  297 (398)
                      .+++.|..|.| +-+..-+.+...+  +..+..+...-....+..+.  .......+..+...    +.++.+.+....+
T Consensus       215 da~vqS~dkNF-~VPvGgai~As~~--~~~i~~vs~~YpGRas~sp~--ld~~itLl~LG~~g~~~ll~~r~~~f~~l~e  289 (389)
T PF05889_consen  215 DAFVQSTDKNF-MVPVGGAIMASFD--PSGILAVSKEYPGRASASPS--LDLFITLLSLGCTGYGALLKERKASFPYLKE  289 (389)
T ss_dssp             SEEEEEHHHHH-CEESSHEEEEESS--HHHHHHHHHTSHSHBTSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeecCCCE-EecCCCcEEEecC--HHHHHHHHHHhhhhhhcccc--hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            36788999988 3333335555554  77888776544332333332  22233333222222    3333334444444


Q ss_pred             HHHHHhccCCCCccccCCccEEEEeeCCCCC---CC-hHHHHHHHHHhcCeEE----ecCCCC-------CCCCeEEEEe
Q 015890          298 IIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD-DFEVVRWLAHRHGVVV----IPGGAC-------GCRGHLRISF  362 (398)
Q Consensus       298 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~ll~~~gi~v----~~g~~~-------~~~~~iRi~~  362 (398)
                      ++.+.-++.+......|.+...+.+.++...   .. ...+-..| ..+||.-    .+....       +...++-++.
T Consensus       290 rl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~L-f~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As  368 (389)
T PF05889_consen  290 RLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSML-FKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS  368 (389)
T ss_dssp             HHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHH-HHTTEESSEEEETSSCEEETTSS--SSSEEEEEE
T ss_pred             HHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHH-HhCCcccceeeccCCCcccccCCCCchHHHHHHH
Confidence            4444444444311122333333444443221   11 23444544 5776642    222111       1236787754


Q ss_pred             cC-CCHHHHHHHHHHHHHHHH
Q 015890          363 GG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       363 ~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      .. .+.+|++.++++|.++++
T Consensus       369 aiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  369 AIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             -TT--HHHHHHHHHHHHHHHH
T ss_pred             HhCCCHHHHHHHHHHHHHHhC
Confidence            44 799999999999999874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.84  E-value=1.7e-06  Score=74.26  Aligned_cols=179  Identities=17%  Similarity=0.218  Sum_probs=121.1

Q ss_pred             CCCCCC-CCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEEeC-CCCcChh---------
Q 015890           61 ISKYGA-DEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFA-PYYFNSY---------  127 (398)
Q Consensus        61 ~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~-p~~~~~~---------  127 (398)
                      .++|+. +.|.+.|.+..++-+    +.+..  ...+.+ +|+|+..++..+++|||+.+... .-|....         
T Consensus        57 stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~  131 (416)
T COG4100          57 STGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEG  131 (416)
T ss_pred             CCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCC
Confidence            344544 446666666666655    54322  334445 45999999999999999988543 3343333         


Q ss_pred             -hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHH--cCCEEEEe
Q 015890          128 -MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKA--AGSWLVVD  203 (398)
Q Consensus       128 -~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~--~~~~livD  203 (398)
                       ..++.+|.....+ |...+| .+|.+.++..+++++  |+|.|... ....--.++.+++++++++.++  .|++++||
T Consensus       132 ~gSL~dfgi~Y~~v-~Lt~~g-kiD~~~v~~~i~~~t--kli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD  207 (416)
T COG4100         132 QGSLKDFGIKYKAV-PLTADG-KIDIQAVKTAISDRT--KLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD  207 (416)
T ss_pred             cccHHHhCcceeec-ccccCC-cccHHHHHHhcCccc--eEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence             2456677777777 666555 789999999999887  99998743 2222224677889999998875  47999999


Q ss_pred             ece--eccCCCccccccCCcEEEEcccccccCCCcc--eeEEEEccCCcHHHHHHH
Q 015890          204 NTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       204 e~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~i~~~~~~~~~~~~l  255 (398)
                      .+|  |.-.-.+...   +.+++.+|+-|.-| +|+  -.||+.++   .++++..
T Consensus       208 NCYGEFvE~~EPt~v---GaDliAGSLIKNpG-GgiaktGGYiaGk---~~~ve~~  256 (416)
T COG4100         208 NCYGEFVEEKEPTHV---GADLIAGSLIKNPG-GGIAKTGGYIAGK---AELVEAA  256 (416)
T ss_pred             ccchhhhhccCcccc---chhhhccceeeCCC-Cceeeccceeech---HHHHHhh
Confidence            999  5543322222   34577899999886 554  24788888   7787754

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.82  E-value=3.5e-06  Score=72.63  Aligned_cols=339  Identities=12%  Similarity=0.028  Sum_probs=190.3

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC-CCCCCCCCCCc---HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP-SISKYGADEGL---PELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~~~---~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      .++.+.|..++-.+. |....+.+.+.++.= ....|+...|-   ...-+.+-..+++.-|...++|.+.++-|.-+..
T Consensus        65 d~~~iYlcGNSLGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~  143 (465)
T KOG3846|consen   65 DKPVIYLCGNSLGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHS  143 (465)
T ss_pred             CCCeEEEeccccccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHH
Confidence            456777776665553 555555555444320 01111111110   1112233344444458888899999999999999


Q ss_pred             HHHHhccCC---CEEEEeCCCCcC----hhhHHHhcCcE----EEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeC
Q 015890          105 IVLTLCDAG---DSVVMFAPYYFN----SYMSFQMTGVT----HILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVN  172 (398)
Q Consensus       105 ~~~~l~~~g---d~Vl~~~p~~~~----~~~~~~~~g~~----~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~  172 (398)
                      ++.++.+|-   -+|++..-.|++    ....++..|..    .+.+.|.. ....+..+++.+.|+ ++..+++|+++.
T Consensus       144 Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE-GEetlRteDILd~IEkngDeiA~v~fSG  222 (465)
T KOG3846|consen  144 LLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE-GEETLRTEDILDTIEKNGDEIALVCFSG  222 (465)
T ss_pred             HHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc-cccchhHHHHHHHHHhcCCeEEEEEeec
Confidence            999998765   378888777755    44566777753    33442332 223466778877776 444477888888


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      .+.-||+.++   +.+|-..-+..|+++=.|=+| ++.  .+.....++.++.+...-|-++.+.-.+|-+....  +..
T Consensus       223 vqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe--kh~  295 (465)
T KOG3846|consen  223 VQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE--KHT  295 (465)
T ss_pred             ceeecccccc---hhhhhhcccCCCcEechhhhhhhcC--CceEEeecCCceEEEeeecccccCCCccceeeeeh--hhh
Confidence            8999999999   888886666778998889877 543  22333345566777777787743222344433332  111


Q ss_pred             HHHHHHhh------------------------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccC
Q 015890          252 ATQLLKVQ------------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       252 ~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      .+...++.                        ...-.+++.....++...|+.-. -.+++.+++..-...++...++..
T Consensus       296 ~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~  375 (465)
T KOG3846|consen  296 KESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKAS  375 (465)
T ss_pred             cchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHh
Confidence            11111111                        11123445555566666665411 123333333333333333333321


Q ss_pred             CC-----------CccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHH
Q 015890          307 GE-----------GAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDD  369 (398)
Q Consensus       307 ~~-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~  369 (398)
                      .+           +.++.|.    .|--+.+.+..   ....+..+| .++|+.+--    ..++.||+....  .+-.|
T Consensus       376 ~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~f~D  447 (465)
T KOG3846|consen  376 KGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNTFSD  447 (465)
T ss_pred             cccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHH-HHcCeeccc----cCCCceEeecchhhccHHH
Confidence            11           1122221    12222223321   234666666 588997643    257899999665  57789


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGLEEL  384 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~  384 (398)
                      +-.++..|.+++..+
T Consensus       448 vy~f~n~L~e~~d~~  462 (465)
T KOG3846|consen  448 VYIFVNALNEAMDKL  462 (465)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999988887654

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.73  E-value=1.4e-06  Score=76.46  Aligned_cols=214  Identities=13%  Similarity=0.052  Sum_probs=122.4

Q ss_pred             hHHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCC
Q 015890          152 ADWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGD  220 (398)
Q Consensus       152 ~e~l~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~  220 (398)
                      ++++|+.|.    .+..++++++...+...|. ..+++.++.|.++|++||+.+|+||++  -+..|.-..    ....+
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            566777765    2223677888877888887 478999999999999999999999999  333332211    11223


Q ss_pred             cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC-c-hHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P-EWVTERVKDLVRNREI  298 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~  298 (398)
                      .+++  +|||-|- .|   ||..-.    +++- -..++...+|...+.-...+.+.++.. + +.+++....-......
T Consensus       335 pD~v--TFSKK~q-~g---Gffh~~----~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~g  403 (484)
T KOG1405|consen  335 PDVV--TFSKKFQ-TG---GFFHDE----EFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKG  403 (484)
T ss_pred             ccce--ehhhhhh-cC---ccccCc----ccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            2333  7889884 44   543322    2211 012222234555555555555555531 2 2222222222333444


Q ss_pred             HHHHhccCCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHH
Q 015890          299 IREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR  376 (398)
Q Consensus       299 l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~  376 (398)
                      |.+.-++.|. +.-..+. |-|+.++++.+. -...++. .++.+|+-+-.+    +...||+..+. ..+-+.+-++++
T Consensus       404 L~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~-~Rdk~i~-~~~~nGv~~GGC----g~~siRfRPsLvf~~~Ha~i~l~~  476 (484)
T KOG1405|consen  404 LLELQAKYPGKINNLRGR-GTFIAWDCPSGS-IRDKLIL-IARLNGVNLGGC----GDKSIRFRPSLVFRKHHADIFLDI  476 (484)
T ss_pred             HHHHHHhCchhhhccccc-ceEEEEeCCChH-HHHHHHH-HHHHcCceeccc----ccceeeeccceeehhhhHHHHHHH
Confidence            4444445555 2223455 666777887643 2233444 556889877432    35567776665 466778888888


Q ss_pred             HHHHHHH
Q 015890          377 LRRGLEE  383 (398)
Q Consensus       377 l~~~~~~  383 (398)
                      +.+.++.
T Consensus       477 ~~k~l~~  483 (484)
T KOG1405|consen  477 FDKILAG  483 (484)
T ss_pred             HHHHhcc
Confidence            8877654

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.71  E-value=7.5e-06  Score=77.39  Aligned_cols=308  Identities=17%  Similarity=0.151  Sum_probs=184.3

Q ss_pred             CCCCCCC---CCcHHHHHHHHHHHhhhcCCCCCcEEEecChH-H----HHHHHHHHh-ccCCC----EEEEeCCCCcChh
Q 015890           61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN-Q----AFVNIVLTL-CDAGD----SVVMFAPYYFNSY  127 (398)
Q Consensus        61 ~~~y~~~---~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t-~----a~~~~~~~l-~~~gd----~Vl~~~p~~~~~~  127 (398)
                      ++.|.|.   +|..++...+.++|....|.  +.+.+.+++. +    ++. ++++. ..+|+    .-++|...|....
T Consensus       568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~--D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNP  644 (1001)
T KOG2040|consen  568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF--DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNP  644 (1001)
T ss_pred             CCCCCchHHHhhHHHHHHHHHHHhheeecc--cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCCh
Confidence            5556553   67788888888888877774  4566654332 2    233 33333 33342    3577888888888


Q ss_pred             hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890          128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY  206 (398)
Q Consensus       128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~  206 (398)
                      ..++..|.+++.+ ..+.+| .+|+.+|+++.+. ....+++.++-|+. .|+.  .+.+++++++.++||.-+..|.+-
T Consensus       645 ASA~MagmkvvpV-~~~~~G-~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGAN  719 (1001)
T KOG2040|consen  645 ASAAMAGMKVVPV-GCDANG-NIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGAN  719 (1001)
T ss_pred             hhHHhcCCEEEEe-eccCCC-CccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCC
Confidence            8899999999999 888776 6899999998873 33357788887764 4554  345999999999999999999887


Q ss_pred             -eccCCCccccccCCcEEEEcccccccCC----CcceeEEEEccCCcHHHHHHHHH--h------hc--------cCCCC
Q 015890          207 -FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK--V------QD--------NIPIC  265 (398)
Q Consensus       207 -~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i~~~~~~~~~~~~l~~--~------~~--------~~~~~  265 (398)
                       -..-|.-...+ .+.+++=-.++|.|+.    +|..+|-+.+.   +.++..+..  .      ..        ..+++
T Consensus       720 MNAqVGlc~pGd-~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK---~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~G  795 (1001)
T KOG2040|consen  720 MNAQVGLCRPGD-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWG  795 (1001)
T ss_pred             ccceecccCCcc-ccccceeecccceeeecCCCCCCCCCccchh---hhccccCCCCCccCCCCCCCCCCccceeccCCC
Confidence             22222211111 2233444577888854    33445555544   233222210  0      00        11111


Q ss_pred             c--chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE---EEEeeCCC----CCCChHHHHH
Q 015890          266 A--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI---YLWARLPE----KHLDDFEVVR  336 (398)
Q Consensus       266 ~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~  336 (398)
                      .  =.+.-++..+++..  ..+.+..+...-+++++...|+..-.+.+.... +.   =+.+++++    ...+..++++
T Consensus       796 sa~ILpISwaYikmMG~--~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~-~~vaHEFIlD~r~fK~~agieavDvAK  872 (1001)
T KOG2040|consen  796 SALILPISWAYIKMMGS--GGLKDASKIAILNANYMAKRLESHYKILFRGEN-GLVAHEFILDLRPFKKTAGIEAVDVAK  872 (1001)
T ss_pred             cceeehhHHHHHHHhcc--cccchhhHHHhhhhHHHHHHHhhccceeEecCC-cceeeeeeeechhhccccCCcHHHHHH
Confidence            1  12333444455542  334444445556788888888875442333322 32   23444432    2257888999


Q ss_pred             HHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          337 WLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       337 ~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +|. ++|..-...++. -++.+=|-..- .+.+|++++++++-..-+++.
T Consensus       873 RL~-DYgFHaPTmswP-V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~  920 (1001)
T KOG2040|consen  873 RLM-DYGFHAPTMSWP-VAGTLMIEPTESEDKAELDRFCDALISIREEIA  920 (1001)
T ss_pred             HHH-hccCCCCccccc-cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence            886 899877544433 45556555544 456678888888766555543

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.04  E-value=0.0025  Score=60.93  Aligned_cols=312  Identities=14%  Similarity=0.120  Sum_probs=164.8

Q ss_pred             ccCCCCCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-cc
Q 015890           38 GVVYWQPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CD  111 (398)
Q Consensus        38 g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~  111 (398)
                      |--...+|+.++.-+.+.  ..|..+|.|-     +|..|-.--....+....|++-.|--+-.-+|+|-++...+. ..
T Consensus       126 GYyn~~vP~~I~RNilen--p~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~  203 (1001)
T KOG2040|consen  126 GYYNTHVPAVILRNILEN--PGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN  203 (1001)
T ss_pred             ccccccCcHHHHHHhhhC--CcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc
Confidence            333445677777665442  2445566553     333222222233344556777555555555556666555554 35


Q ss_pred             CCCEEEEeCCCCcChhhHHHhc----CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          112 AGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      ++.+.++...+|+.....++..    |+++...          |   +++.-...+.+..+++..|.. -|.+.+   ..
T Consensus       204 krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~---~~~~~~s~~~v~gvlvQYP~t-~G~i~d---~~  266 (1001)
T KOG2040|consen  204 KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------D---IKEADYSSKDVSGVLVQYPDT-EGSVLD---FD  266 (1001)
T ss_pred             ccceEEecCCCCcchhhhhhccccccceeEEec----------C---HHHhhccccceeEEEEEcCCC-CCcccC---HH
Confidence            5678999999998877665432    2332221          2   222222222267888887765 578888   88


Q ss_pred             HHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccc---cCCCcceeEEEEccC------------------
Q 015890          188 RISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKA---YGMMGWRVGYIAYPS------------------  246 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~---~~~~G~r~G~i~~~~------------------  246 (398)
                      ++++.++++|.++++-.--+...-.. ++...+.+|.++|...+   +|.+|.-.|++.+.+                  
T Consensus       267 el~~~a~~~~s~vv~atDLLaLtiLr-pPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~  345 (1001)
T KOG2040|consen  267 ELVELAHANGSLVVMATDLLALTILR-PPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDAL  345 (1001)
T ss_pred             HHHHHhhccCceEEEeehhhHHHccC-ChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeeccc
Confidence            88999999988876542122221111 11123445777774331   222233333332221                  


Q ss_pred             CcHHHHHH-------HHHhhccCCCCcchHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          247 EVEGFATQ-------LLKVQDNIPICASIISQHLALYSLQ--TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       247 ~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      +.+.+.-.       +++.+.....|......+-+.++..  .+.+.+++..+++......|.+.|+..+. ++..-  .
T Consensus       346 gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~agh-el~~k--~  422 (1001)
T KOG2040|consen  346 GKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGH-ELQHK--P  422 (1001)
T ss_pred             ccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcch-hhccc--c
Confidence            00111111       1111111112221111111112221  24566788888888888899999987774 44322  3


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      +|=.+.+.-+. +.+++..+.+ +++|-++--    ..+.|-+++.- .+++|++.++..+.
T Consensus       423 fFDTLkI~~~~-s~~~~l~rA~-~~~iNlr~~----ed~tigvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  423 FFDTLKIRCGC-SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             ccceEEEEecC-cHHHHHHHHH-hhcCceEEe----ecCceEEeecccccHHHHHHHHHHHc
Confidence            55455554332 5677777765 666755542    46788888877 67778888877775

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.70  E-value=0.0024  Score=54.91  Aligned_cols=329  Identities=13%  Similarity=0.104  Sum_probs=174.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQ  100 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~  100 (398)
                      .+..++|+-|  |...|.+|+..+.+-+-+-...+-      +.+.....+.+.-...+.+++.++.  +-+++..|+|.
T Consensus         5 ~~~vvnFaaG--PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~   82 (370)
T KOG2790|consen    5 PERVVNFAAG--PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG   82 (370)
T ss_pred             ccceeecCCC--cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence            3567888877  555566666666555543110000      0223334444444445555567653  23555677777


Q ss_pred             HHHHHHHHhc--cCCCEE-EEeCCCCcC-hhhHHHhcCcE-EEEeccCCCCC--CCCChHHHHHhhccCCCCeEEEEeCC
Q 015890          101 AFVNIVLTLC--DAGDSV-VMFAPYYFN-SYMSFQMTGVT-HILVGPCSSKT--LHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       101 a~~~~~~~l~--~~gd~V-l~~~p~~~~-~~~~~~~~g~~-~~~~~~~~~~~--~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      -..++...|+  +.|+.. .+...+|.. ...-++.+|.. .+.. +..+..  -.+|.+.++..    ++.+.|+.|.-
T Consensus        83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~-~~k~y~ygkvPd~~~w~~~----~da~yvyyCaN  157 (370)
T KOG2790|consen   83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIP-KLKSYTYGKVPDPSTWELN----PDASYVYYCAN  157 (370)
T ss_pred             cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEec-cccccccCcCCChhhcccC----CCccEEEEecC
Confidence            7777777776  455311 111223311 22234556643 3333 444333  34565554432    22467888865


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      ..-.|+-++.  +.    +-.-+|..+|.|-.. |..  .+......  .++.....|.+|++|+  -.++.+   ++++
T Consensus       158 ETVHGVEf~~--~P----~~~~~~~vlVaDmSSnflS--rpvDvsk~--gvi~aGAQKN~G~aG~--Tvvivr---~dll  222 (370)
T KOG2790|consen  158 ETVHGVEFDF--IP----VNDPKGAVLVADMSSNFLS--RPVDVSKF--GVIFAGAQKNVGPAGV--TVVIVR---KDLL  222 (370)
T ss_pred             ceeeceecCC--CC----CCCCCCceEEEecccchhc--CCccchhc--ceEEeccccccCcccc--EEEEEe---hhhh
Confidence            5666776541  11    112468899999666 443  23333333  3667788999998874  556666   4555


Q ss_pred             HHHHHhh------------ccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc--cC--
Q 015890          253 TQLLKVQ------------DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK--GG--  314 (398)
Q Consensus       253 ~~l~~~~------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~--  314 (398)
                      ......-            .....++|.+.+...-..++.  ....+..+.+.-.+....+++.+.+..++-..  .+  
T Consensus       223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~  302 (370)
T KOG2790|consen  223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSV  302 (370)
T ss_pred             cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhh
Confidence            4432211            111224444444444443332  12345666666777788899999875331111  11  


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..-+-+.+++.+.. -..++..... +++..-.-|  ..+-+.||-|+-. .+-++.+++++.++++.+.
T Consensus       303 RS~MNV~Fri~~d~-Le~eFLkeA~-~~~mv~LKG--hRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~  368 (370)
T KOG2790|consen  303 RSRMNVPFRIEKDE-LEAEFLKEAA-KEHMVQLKG--HRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK  368 (370)
T ss_pred             hhhcccceeecchH-HHHHHHHHHH-Hhhhhcccc--ccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence            11344555665321 2345555554 344433233  3456889999776 8889999988888876653

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=97.66  E-value=0.00042  Score=58.84  Aligned_cols=280  Identities=17%  Similarity=0.181  Sum_probs=140.6

Q ss_pred             HHHHHHHHhc--cCCCE-EEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeE-EEEeCCCC
Q 015890          101 AFVNIVLTLC--DAGDS-VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKL-VSVVNPGN  175 (398)
Q Consensus       101 a~~~~~~~l~--~~gd~-Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~-v~i~~p~n  175 (398)
                      ++.+.+.++.  +|..+ |+-+.-.-.+.....-..|++++.+.+.-+ +...-|++.+++.+++.. ... +++.+-.+
T Consensus        88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-~dcilci~stts  166 (432)
T KOG3843|consen   88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-EDCILCIHSTTS  166 (432)
T ss_pred             cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-CceEEEEeeccc
Confidence            3444455554  34433 333444444455556678888887744432 223448899999998654 353 34332221


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      .. .--+++.+++|+.+|..|+++-|+..+| +-....-.    ...-+-.+.++.|+.|.|-.|=  .|.++..-+ ..
T Consensus       167 cf-apr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk-~n  242 (432)
T KOG3843|consen  167 CF-APRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFK-DN  242 (432)
T ss_pred             cc-CCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhH-HH
Confidence            11 1234567999999999999999999999 32211000    0111122356789999995432  144443211 45


Q ss_pred             HHHHHHHhhccCCCCcchHHHHHHHHHhcCCc----hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC--
Q 015890          251 FATQLLKVQDNIPICASIISQHLALYSLQTGP----EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL--  324 (398)
Q Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--  324 (398)
                      .+..+.+...+.....++...  +...|..+.    +.+.++.+...+.++.+....+.++.-.+..|++.......+  
T Consensus       243 ~iq~iak~ypgrasa~ps~dl--litll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~t  320 (432)
T KOG3843|consen  243 FIQEIAKMYPGRASASPSLDL--LITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKT  320 (432)
T ss_pred             HHHHHHHhCCCccccCccHHH--HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhcc
Confidence            666665554433333333333  333333333    223444455555555555544444432223333222222222  


Q ss_pred             -CCCCCChHHHHHHHHHhcCe---EEecCCCCC--CC----------------CeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          325 -PEKHLDDFEVVRWLAHRHGV---VVIPGGACG--CR----------------GHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       325 -~~~~~~~~~~~~~ll~~~gi---~v~~g~~~~--~~----------------~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                       ++....+..++--++-.+||   .|.|.+...  -+                +++-+.... .+..|++.+..+|...+
T Consensus       321 i~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~  400 (432)
T KOG3843|consen  321 IDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCL  400 (432)
T ss_pred             CChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHH
Confidence             22111122222222234444   344443321  01                233333222 56788999999998888


Q ss_pred             HHHhcc
Q 015890          382 EELVKD  387 (398)
Q Consensus       382 ~~~~~~  387 (398)
                      .++.++
T Consensus       401 a~~~ke  406 (432)
T KOG3843|consen  401 AAFRKE  406 (432)
T ss_pred             HHHHHH
Confidence            777654

>PLN02672 methionine S-methyltransferase

Probab=97.19  E-value=0.024  Score=59.32  Aligned_cols=226  Identities=10%  Similarity=0.081  Sum_probs=138.2

Q ss_pred             HHHHHHHHHcC----CCeEEcCCccCCCCCc-HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCc
Q 015890           19 MVQIQELVRGA----KNAVSLAQGVVYWQPP-KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS   91 (398)
Q Consensus        19 ~~~~~~~~~~g----~~~~~l~~g~~~~~~~-~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~   91 (398)
                      ...+++...+|    ++.+||+.-+...... -..+..+...+.+.....|.+..|...+|+-++.|++..+++  .+++
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  451 (1082)
T PLN02672        372 VKTIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDN  451 (1082)
T ss_pred             HHHHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccc
Confidence            44455555555    5567777654333210 123455666677766788888999999999999999998875  5899


Q ss_pred             EEEecChHHHHHHHHHHh------ccCCCEEEEeCCCCcChhhHHHhcC--------cEEEEeccCCCCCCCCChHHHHH
Q 015890           92 VMVTAGANQAFVNIVLTL------CDAGDSVVMFAPYYFNSYMSFQMTG--------VTHILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l------~~~gd~Vl~~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                      |++.++-..|++.+++.+      ++.+.+-.++.    -|...+...|        ..+..+ +.+.   +  .+.+.+
T Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~--~~~~~~  521 (1082)
T PLN02672        452 VVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK----KWLTSLAIENATSDSKSDDVITVI-EAPR---Q--SDLVIE  521 (1082)
T ss_pred             eEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH----HHHhHhhhhcccccCccCCeEEEE-eCCC---c--chHHHH
Confidence            999999999998877764      33332332221    2333333333        222222 2111   1  234556


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcc--ccc-------cCCcEEEEcc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH--CCV-------EGDHVVNLFS  227 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~--~~~-------~~~~~i~~~s  227 (398)
                      .++.-+ +++|+..-....   ..+-..++.|.+.+++.|.+++.|..- |..++.+.  ...       .+.+..++..
T Consensus       522 ~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  597 (1082)
T PLN02672        522 LIKKLK-PQVVVTGMADFE---MRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICG  597 (1082)
T ss_pred             HHHhCC-CeEEEEeccchh---hhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhh
Confidence            666443 688876533322   233445899999999999999999766 44332211  111       1345566667


Q ss_pred             cccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      +-|.-=.+.+.+.+++.-+  ..+.+.+.+...
T Consensus       598 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  628 (1082)
T PLN02672        598 LVKNQVYSDLEVAFVISEN--EAVLKALSKTGE  628 (1082)
T ss_pred             hhhccccccceEEEEecCc--HHHHHHHHHHHH
Confidence            7665545899999988775  556666654433

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=86.97  E-value=8.6  Score=32.58  Aligned_cols=100  Identities=17%  Similarity=0.250  Sum_probs=66.0

Q ss_pred             cEEEecChHHHHHHHHHHhccCCCEE---E--EeCCC--C-------cChhhHHHhcCcEEEEeccCCCCCCCCChHHHH
Q 015890           91 SVMVTAGANQAFVNIVLTLCDAGDSV---V--MFAPY--Y-------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE  156 (398)
Q Consensus        91 ~v~~~~g~t~a~~~~~~~l~~~gd~V---l--~~~p~--~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  156 (398)
                      -+.+.+||-.++.++..++. .|..|   +  .|...  |       .-....++..|..++.. ..... ..-..++|.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~-~~~g~-~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTF-DTSGE-EEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEE-ecCcc-chhhHHHHH
Confidence            36788999999887777663 34322   1  22222  1       11234668888887777 44321 123577888


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV  201 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li  201 (398)
                      +.++.-. ..+|+       +|.+.+..+..++-.+|++.|+..+
T Consensus        80 ~~l~~l~-~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~  116 (223)
T COG2102          80 EALRRLK-VDGIV-------AGAIASEYQKERVERLCEELGLKVY  116 (223)
T ss_pred             HHHHhCc-ccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence            8887543 44555       7899999999999999999998743

>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]

Probab=86.77  E-value=21  Score=31.35  Aligned_cols=158  Identities=12%  Similarity=0.059  Sum_probs=82.9

Q ss_pred             HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEec---C
Q 015890           22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA---G   97 (398)
Q Consensus        22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~---g   97 (398)
                      +.-+.++|.+++.|+.... |...=|.+..+-.+++.++    + ..   ...-+.+.++-+.  +.+..-++++-   -
T Consensus        37 i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g----~-t~---~~~lel~~~~r~~--~~~~Pivlm~Y~Npi  106 (265)
T COG0159          37 IKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAG----V-TL---EDTLELVEEIRAK--GVKVPIVLMTYYNPI  106 (265)
T ss_pred             HHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCC----C-CH---HHHHHHHHHHHhc--CCCCCEEEEEeccHH
Confidence            3334667788888887653 3333466666666666542    2 11   2222223222111  22222344442   1


Q ss_pred             hHHHHHHHHHHhccCC-CEEEEeCCCC---cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890           98 ANQAFVNIVLTLCDAG-DSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus        98 ~t~a~~~~~~~l~~~g-d~Vl~~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      -.-++...++-+.+.| |.+++++--+   ..+...++.+|+.++++ -.+ .   -+.+.+++..+...  ..++..+-
T Consensus       107 ~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~l-vaP-t---t~~~rl~~i~~~a~--GFiY~vs~  179 (265)
T COG0159         107 FNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFL-VAP-T---TPDERLKKIAEAAS--GFIYYVSR  179 (265)
T ss_pred             HHhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEE-eCC-C---CCHHHHHHHHHhCC--CcEEEEec
Confidence            2234444444444555 7888876554   23556777788877776 221 1   14456666666543  55666666


Q ss_pred             CCCCccCCC-HHHHHHHHHHHHHc
Q 015890          174 GNPSGTYIP-ERLLKRISDLCKAA  196 (398)
Q Consensus       174 ~nptG~~~~-~~~l~~i~~l~~~~  196 (398)
                      +.-||.-.+ ...+.++++..+++
T Consensus       180 ~GvTG~~~~~~~~~~~~v~~vr~~  203 (265)
T COG0159         180 MGVTGARNPVSADVKELVKRVRKY  203 (265)
T ss_pred             ccccCCCcccchhHHHHHHHHHHh
Confidence            667787554 22356666666654

>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=86.27  E-value=7  Score=35.48  Aligned_cols=114  Identities=11%  Similarity=0.038  Sum_probs=69.1

Q ss_pred             HHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCCh
Q 015890           75 DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA  152 (398)
Q Consensus        75 ~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  152 (398)
                      ...+++...++.++..  .|+.....  .+..+.....+.+  += ..-.|.+|.+.++.-.++++++ +.+.- .  -.
T Consensus        16 ~ia~~f~~al~~~p~s~~~Ivava~~--s~~~A~~fAq~~~--~~-~~k~y~syEeLakd~~vDvVyi-~~~~~-q--H~   86 (351)
T KOG2741|consen   16 RIARDFVRALHTLPESNHQIVAVADP--SLERAKEFAQRHN--IP-NPKAYGSYEELAKDPEVDVVYI-STPNP-Q--HY   86 (351)
T ss_pred             HHHHHHHHHhccCcccCcEEEEEecc--cHHHHHHHHHhcC--CC-CCccccCHHHHhcCCCcCEEEe-CCCCc-c--HH
Confidence            3444555555555533  33333322  4555544443322  11 3456788999999999999998 54321 1  24


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY  206 (398)
Q Consensus       153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~  206 (398)
                      +.+--++..+   |.|++.-|     ..++.++.++|.+.|+++| .++.|..+
T Consensus        87 evv~l~l~~~---K~VL~EKP-----la~n~~e~~~iveaA~~rg-v~~meg~~  131 (351)
T KOG2741|consen   87 EVVMLALNKG---KHVLCEKP-----LAMNVAEAEEIVEAAEARG-VFFMEGLW  131 (351)
T ss_pred             HHHHHHHHcC---CcEEeccc-----ccCCHHHHHHHHHHHHHcC-cEEEeeee
Confidence            5555555544   55777654     4567889999999999988 66667666

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=83.45  E-value=16  Score=31.41  Aligned_cols=94  Identities=26%  Similarity=0.177  Sum_probs=53.9

Q ss_pred             ecChHHHHHHHHHHhccCCCEEE-EeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVV-MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      +..|..+ ..++..|..++-+|. +..+.-......++..|++++.. +.+      |.+.|.++++.-   ..|++..+
T Consensus         5 GatG~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~-d~~------~~~~l~~al~g~---d~v~~~~~   73 (233)
T PF05368_consen    5 GATGNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEA-DYD------DPESLVAALKGV---DAVFSVTP   73 (233)
T ss_dssp             TTTSHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES--TT-------HHHHHHHHTTC---SEEEEESS
T ss_pred             CCccHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeec-ccC------CHHHHHHHHcCC---ceEEeecC
Confidence            3334444 345555555665444 44544223445567789988755 322      789999999854   45555544


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      ...   ....+.-..+++.|++.|+..++
T Consensus        74 ~~~---~~~~~~~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   74 PSH---PSELEQQKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             CSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred             cch---hhhhhhhhhHHHhhhccccceEE
Confidence            322   22344578889999988865554

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR00262 trpA tryptophan synthase, alpha subunit

Probab=82.15  E-value=35  Score=30.05  Aligned_cols=164  Identities=14%  Similarity=0.131  Sum_probs=88.7

Q ss_pred             HHHHHHcCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEe-cCh-
Q 015890           22 IQELVRGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT-AGA-   98 (398)
Q Consensus        22 ~~~~~~~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~-~g~-   98 (398)
                      ++.+.++|-+++.++.... |...=|.+.++..+++.++.     ..   ..+.+.+.+.-+...+++..  +++ .+- 
T Consensus        30 ~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~-----~~---~~~~~~v~~ir~~~~~~plv--~m~Y~Npi   99 (256)
T TIGR00262        30 IKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGM-----TP---EKCFELLKKVRQKHPNIPIG--LLTYYNLI   99 (256)
T ss_pred             HHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCC-----CH---HHHHHHHHHHHhcCCCCCEE--EEEeccHH
Confidence            5556788999999998764 33345777778777776531     11   23333333321111233222  222 221 


Q ss_pred             -HHHHHHHHHHhccCC-CEEEEeCCCCc---ChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890           99 -NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus        99 -t~a~~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                       .-++...+..+.+.| |.|++++-.+.   .+...++..|+..+.+ -.+ .   -+.+.++...+...  ..|++.+-
T Consensus       100 ~~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~l-v~P-~---T~~eri~~i~~~~~--gfiy~vs~  172 (256)
T TIGR00262       100 FRKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFL-VAP-N---ADDERLKQIAEKSQ--GFVYLVSR  172 (256)
T ss_pred             hhhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEE-ECC-C---CCHHHHHHHHHhCC--CCEEEEEC
Confidence             224455555666656 77888765542   2445667888886654 122 1   14567777766543  45555544


Q ss_pred             CCCCccC--CCHHHHHHHHHHHHH-cCCEEEEe
Q 015890          174 GNPSGTY--IPERLLKRISDLCKA-AGSWLVVD  203 (398)
Q Consensus       174 ~nptG~~--~~~~~l~~i~~l~~~-~~~~livD  203 (398)
                      +.-||.-  ++.+ +.+.++.+++ .+..+++|
T Consensus       173 ~G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~vg  204 (256)
T TIGR00262       173 AGVTGARNRAASA-LNELVKRLKAYSAKPVLVG  204 (256)
T ss_pred             CCCCCCcccCChh-HHHHHHHHHhhcCCCEEEe
Confidence            5678874  4444 4444444443 35666665

Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	398
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		2e-31
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		8e-31
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		3e-30
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		1e-29
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-29
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		2e-29
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		3e-29
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		3e-29
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		1e-28
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		4e-28
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		9e-22
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		7e-19
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-18
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		1e-17
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		2e-17
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		5e-15
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		1e-14
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		3e-14
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-14
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		2e-13
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		2e-13
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		3e-13
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		3e-13
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		3e-12
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		4e-12
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		7e-12
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		8e-12
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		2e-11
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		2e-11
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		2e-11
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		2e-11
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		4e-11
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		6e-11
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		7e-11
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		8e-11
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		8e-11
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		9e-11
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		1e-10
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		4e-10
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		4e-10
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		5e-10
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		6e-10
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		9e-10
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-09
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-09
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		1e-09
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		1e-09
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-09
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		2e-09
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		2e-09
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		2e-09
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		3e-09
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		3e-09
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		7e-09
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		7e-09
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		9e-09
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		9e-09
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		3e-08
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		4e-08
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		4e-08
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		1e-07
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		1e-06
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		4e-06
3get_A	365	Crystal Structure Of Putative Histidinol-Phosphate		1e-05
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-05
2zy5_A	546	R487a Mutant Of L-Aspartate Beta-Decarboxylase Leng		2e-05
2zy3_A	546	Dodecameric L-Aspartate Beta-Decarboxylase Length =		2e-05
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		3e-05
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		3e-05
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		4e-05
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		5e-05
2zy2_A	544	Dodecameric L-Aspartate Beta-Decarboxylase Length =		1e-04
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		1e-04
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		1e-04
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		2e-04
3fdd_A	533	The Crystal Structure Of The Pseudomonas Dacunhae A		2e-04
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		7e-04

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 184/377 (48%), Gaps = 22/377 (5%)
Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GL ELR+A+ +K
Sbjct: 17  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 75
Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +    K+ +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 76  LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K +  K    +++  +P NP+G  + ++ L+ I+D      
Sbjct: 136 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
             ++ D  Y  F+YD  +H  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251
Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 308
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 252 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310
Query: 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 366
             VK  +GA Y++ R+ +  L   +    +     V V+PG A G    G++RIS+    
Sbjct: 311 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 369
Query: 367 EDDCKAAADRLRRGLEE 383
           E   + A DR+ R L+E
Sbjct: 370 E-KLEEAMDRMERVLKE 385

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 22/377 (5%)
Query: 21  QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
           ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG + GL ELR+A+ +K
Sbjct: 16  KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 74
Query: 81  LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           L ++N +    K+ +MV  GANQAF+  +      G+ V++  P + +   +  + G   
Sbjct: 75  LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 134
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
           + V          + D L+K +  K    +++  +P NP+G  + ++ L+ I+D      
Sbjct: 135 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 198 SWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 250
             ++ D  Y  F+YD  +H  +       +  + +  FSK + M GWR+G++A PS +  
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 250
Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 308
              +++K Q     C     Q+ A  +L+    W  V E  K+  R R+++ + L+ +G 
Sbjct: 251 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 309
Query: 309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 366
             VK  +GA Y++ R+ +  L   +    +     V V+PG A G    G++RIS+    
Sbjct: 310 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 368
Query: 367 EDDCKAAADRLRRGLEE 383
           E   + A +R+ R L+E
Sbjct: 369 E-KLEEAMERMERVLKE 384

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 14/380 (3%)
Query: 10  RALETEMPIMVQIQ--ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           +A++ + P+ V  +  EL R   + V+L  G   +  P+   E  +  +     +KY   
Sbjct: 9   QAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPP 67
Query: 68  EGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
            G+PELR+AL +K  +EN L       +VT G +QA  N+   + D GD V++ +PY+ +
Sbjct: 68  AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVS 127
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
                +  G   + V     +   PD + + + +   P  K + V +P NP+G   P+ +
Sbjct: 128 YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEV 185
Query: 186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGY 241
           L+ ++ L      +LV D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301
              P EV      + +     P   +  +   AL + +    +V    +   R R+++ E
Sbjct: 246 ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305
Query: 302 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 361
            L+ LG  AV+   GA Y+         D+      L    GV V+PG      GH+R+S
Sbjct: 306 GLTALGLKAVRPS-GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLS 363
Query: 362 FGGLVEDDCKAAADRLRRGL 381
           +    E++ + A +R  R L
Sbjct: 364 Y-ATSEENLRKALERFARVL 382

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 22/380 (5%)
Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           ++++  +   M +  + + L++  ++ ++L  G   +  P+  +E+    +    + KY 
Sbjct: 17  RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 75
Query: 66  ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
              G+ ELR+ + K++ +  K  +    V+VT GA QA  N  + L D GD V++F+P +
Sbjct: 76  DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 135
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +      + G T  +V    SK   P  + +E  L  K   K V + +P NP+G     
Sbjct: 136 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 193
Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 237
             L+ +  L K    +++ D  Y   +Y       +   EG D +V +  FSK++ M GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           RVGY+    +V   AT + K+Q +   C + ++Q+ AL +L+    ++ +  K+    + 
Sbjct: 254 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 307
Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
            + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A    G 
Sbjct: 308 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 363
Query: 358 LRISFGGLVEDDCKAAADRL 377
           +R+SF   +E     A DR+
Sbjct: 364 VRLSFATSIE-RLTEALDRI 382

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 12/364 (3%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317
                P   +  +   AL + +    +V    +   R R+++ E L+ LG  AV+   GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377
            Y+         D+      L    GV V+PG      GH+R+S+    E++ + A +R 
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 378 RRGL 381
            R L
Sbjct: 379 ARVL 382

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 12/364 (3%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 317
                P   +  +   AL + +    +V    +   R R+++ E L+ LG  AV+   GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 377
            Y+         D+      L    GV V+PG      GH+R+S+    E++ + A +R 
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 378 RRGL 381
            R L
Sbjct: 379 ARVL 382

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G +QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   +KA+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 162/367 (44%), Gaps = 18/367 (4%)
Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
           EL R   + V+L  G   +  P+   E  +  +     +KY    G+PELR+AL +K  +
Sbjct: 25  ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84  ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
           EN L       +VT G  QA  N+   + D GD V++ +PY+ +     +  G   + V 
Sbjct: 84  ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
               +   PD + + + +   P  K + V +P NP+G   P+ +L+ ++ L      +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 257
            D  Y   +Y+G       V  +H + +   + A+ M GWR+GY   P EV      +  
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 258 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 314
           V          I+Q   L +L  Q       E  ++   R R+++ E L+ LG  AV+  
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
            GA Y+         D+      L    GV V+PG      GH+R+S+    E++ + A 
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 375 DRLRRGL 381
           +R  R L
Sbjct: 376 ERFARVL 382

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 32/397 (8%)
Query: 6   KLAKRALETEMPIMVQIQELVRGAKNA-----VSLAQGVVYWQPPKMAMEKVKELVWDPS 60
           KLA R +E+  P M  I +    A  A      S + G   +  PK  +E  K  + +  
Sbjct: 2   KLAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQG 59
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            ++YG   G P LR+A+ +KL ++N L     +++VT G  Q+  N++L + + GD V++
Sbjct: 60  KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVII 119
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
            AP++ +     ++   T +++            + + + +   P  KL+    P NP+G
Sbjct: 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTG 177
Query: 179 -TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLFSFS 229
             Y P+ + + I+ +   AG W++ D  Y   +YD  +H  +        +  V    F+
Sbjct: 178 MVYTPDEV-RAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
           K Y M GWRVG++A P  +   AT   K+Q +        +Q+ A+ + +   + V E +
Sbjct: 237 KTYAMTGWRVGFLAGPVPLVKAAT---KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEML 293
Query: 290 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
                 R  + +AL+ +        +GA Y++  + +      +    L  +H V  +PG
Sbjct: 294 AAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPG 353
Query: 350 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
            A G    +R+S+   +        D ++RG+E L K
Sbjct: 354 AAFGADDCIRLSYATDL--------DTIKRGMERLEK 382

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 60/419 (14%)
Query: 6   KLAKRALETEMPI---MVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
           + +KRAL  E  I   ++  +EL +     + L  G      +QPP+   E   + + + 
Sbjct: 11  RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE- 69
Query: 60  SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
             + YG  EGLPELR A+V++  ++N   +    V VTA   +A   I   L D GD ++
Sbjct: 70  GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 129
Query: 118 MFAPYYFNSYMSFQMTGVTHILVG-PCSSKTL-----HPDADWLEKTLETKPTPKLVSVV 171
           +  P    SY  +  TG+     G P   +T+      PD D + K +  +   K ++V+
Sbjct: 130 VPGP----SYPPY--TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR--TKAIAVI 181
Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDH---------- 221
           NP NP+G    ++ L+ I ++       ++ D  Y +         EG+H          
Sbjct: 182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL------MTYEGEHISPGSLTKDV 235
Query: 222 -VVNLFSFSKAYGMMGWRVGYIAYP------SEVEGFATQLLKVQDNIPICASIISQHLA 274
            V+ +   SK Y   GWR+GY+ +       SEV     +L +++    +C +  +Q  A
Sbjct: 236 PVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR----LCPNTPAQFAA 291
Query: 275 LYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLD 330
           +  L TGP +++ E +K L   R+ I + L+ +   +    +GA Y++ ++   P K  +
Sbjct: 292 IAGL-TGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWK--N 348
Query: 331 DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
           D E V  + H   V+ + G   G    GH R  F   +E   + A DR  + ++E +K+
Sbjct: 349 DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 36/384 (9%)
Query: 27  RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86
           R  ++ + L+ G      P   +EK+  +        Y    G+P LR A+         
Sbjct: 34  RRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYD 93
Query: 87  LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
           +    +S  +VT G+ +   +++L   D GD++++  P Y        + G   I     
Sbjct: 94  VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSY-----PIHIYGAV-IAGAQV 147
Query: 144 SSKTLHPDADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
            S  L P  D+   LE+ + E+ P P+++ +  P NP+   +     +R+  L K     
Sbjct: 148 RSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVM 207
Query: 200 LVVDNTY--FMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252
           +V D  Y   +YDG K   +       D  V  F+ SK+Y M GWR+G++    E+    
Sbjct: 208 VVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL---V 264
Query: 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
           + L +++           Q  A+ +L+   + V +  +   + R+++ + L   G   V+
Sbjct: 265 SALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-WMVE 323
Query: 313 GGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 370
             + ++Y+WA++PE   HL   E  + L     V V PG   G  G   + F  L+E+  
Sbjct: 324 NPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF-ALIEN-- 380
Query: 371 KAAADRLR---RGLEELVK-DGMV 390
               DRLR   RG++ + + DG++
Sbjct: 381 ---RDRLRQAVRGIKAMFRADGLL 401

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 173/395 (43%), Gaps = 48/395 (12%)
Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK-MAMEKVKELVWDPSI 61
           L+KR L  E    M I+   Q+L    K  + L  G   +  PK +  E +K L      
Sbjct: 2   LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSL--KEGK 59
Query: 62  SKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + Y    G+ ELR+ + +    + K  +   ++++T G++      + ++ D GD V++ 
Sbjct: 60  THYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQ 119
Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGN 175
            P Y  + +++ F              +K +  D   + LE+ L  K   K + + +P N
Sbjct: 120 NPCYPCYKNFIRF------------LGAKPVFCDFTVESLEEALSDKT--KAIIINSPSN 165
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDH----VVNLFSFS 229
           P G  I     + I +       +++ D  Y   +Y+G+ +  +E D      + +  FS
Sbjct: 166 PLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFS 221
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW-VTER 288
             Y M GWR+GY+    E+      +LK+Q N+ I A  ISQ+ AL + +   E  +   
Sbjct: 222 XLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAFEKETEREINSM 278
Query: 289 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
           +K+  R R ++ + +   G   V    GA Y++  + E   D  E    L     V + P
Sbjct: 279 IKEFDRRRRLVLKYVKDFG-WEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFVALTP 334
Query: 349 GGACGCRG--HLRISFGGLVEDDCKAAADRLRRGL 381
           G   G +G  ++RIS+    E + K   +R++  L
Sbjct: 335 GIGFGSKGKNYIRISYANSYE-NIKEGLERIKEFL 368

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 154/380 (40%), Gaps = 31/380 (8%)
Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q+  L +    A++L+QG   +  P+   E++   V     ++Y    G+  LR+A+
Sbjct: 19  IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQ-GANQYAPMTGVQALREAI 76
Query: 78  VKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
            +K     +LY       S + VTAGA +A    +  L   GD V+ F P Y +   +  
Sbjct: 77  AQK---TERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIA 133
Query: 132 MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           ++G    +V   + +  H   DW E         +LV +  P NPS T   +     +  
Sbjct: 134 LSGG---IVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190
Query: 192 LCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAY 244
                  +++ D  Y    +  + H  V       +  V + SF K Y M GW+VGY   
Sbjct: 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P+ +   + ++ KV   +    +  +Q      L+  PE          + R+I+  AL+
Sbjct: 251 PAPI---SAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALN 307
Query: 305 PLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG---CRGHLR 359
                 +   EG  +L         LDD E  +WL   HGV  IP    C        +R
Sbjct: 308 E-SRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366
Query: 360 ISFGGLVEDDCKAAADRLRR 379
           + F    E    AAA+RLR+
Sbjct: 367 LCFAK-KESTLLAAAERLRQ 385

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 42/362 (11%)
Query: 26  VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLN 82
           + G +N    + G      P++  + +KELV D    ++  Y + +G  E R A+ + LN
Sbjct: 31  IVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLN 90
Query: 83  QENKLY--KSSVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG 134
             +  +    ++  T GA  +     L++C      DA D  +  APY F  Y  F    
Sbjct: 91  NTHGTHFNADNLYXTXGAAAS-----LSICFRALTSDAYDEFITIAPY-FPEYKVFVNAA 144
Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
              ++  P  ++    D D LE+ +      + V + +P NPSGT   E  +K++SDL +
Sbjct: 145 GARLVEVPADTEHFQIDFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLE 202
Query: 195 AAGS------WLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAY 244
                     +++ D  Y   +YDG K   V    D+ +  +S+SK+  + G R+GY+  
Sbjct: 203 KKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262
Query: 245 PSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300
           P EV    E +A      +    +CA  + Q   +       +  T  +     NR+++ 
Sbjct: 263 PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKC-----QGATGDINAYKENRDLLY 317
Query: 301 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 360
           E L+ +G    K  +GA Y + +  E   DD       A    V+++     GC G +RI
Sbjct: 318 EGLTRIGYHCFK-PDGAFYXFVKALE---DDSNAFCEKAKEEDVLIVAADGFGCPGWVRI 373
Query: 361 SF 362
           S+
Sbjct: 374 SY 375

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS 90
            AV+L QG     PP   +E V+  +      +Y    GLP LR+AL ++   E +    
Sbjct: 26  GAVNLGQGFPSNPPPPFLLEAVRRALG--RQDQYAPPAGLPALREALAEEFAVEPE---- 79
Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTL 148
           SV+VT+GA +A   ++ +L   GD VV+  P +F+ Y+  +F       ++    + +  
Sbjct: 80  SVVVTSGATEALYVLLQSLVGPGDEVVVLEP-FFDVYLPDAFLAGAKARLVRLDLTPEGF 138
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206
             D   LEK L   P  + + +  P NP+G    ER L+ I+ L +A   +L+ D  Y  
Sbjct: 139 RLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE 196
Query: 207 FMYDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
             Y  R     E   +    + S  K     G+RVG+I  P E
Sbjct: 197 LYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE 239

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 163/395 (41%), Gaps = 51/395 (12%)
Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL 87
           +  ++L QG   + PP+ A+++ ++ +  P +++Y    G P L ++L+K  +     +L
Sbjct: 57  RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTEL 116
Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGP--- 142
              +V VT GAN+  ++ ++ L +AGD V++F P++     + ++ G  V ++ + P   
Sbjct: 117 KAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKE 176
Query: 143 -----CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                   +    D +  EK + +K   K V +  P NP G       L  + ++C    
Sbjct: 177 LDQRNTRGEEWTIDFEQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 198 SWLVVDNTY---FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVE 249
             ++ D  Y   +  D            G   + + S   ++   GWR+G++ +  +E+ 
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELL 294
Query: 250 GFATQL---LKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
            +A +    +      P+   CA+ I+  L +        +  +  ++ +   +I     
Sbjct: 295 SYAAKAHTRICFASPSPLQEACANSINDALKI-------GYFEKMRQEYINKFKIFTSIF 347
Query: 304 SPLGEGAVKGGEGAIYLWARL-----------PEKHLD---DFEVVRWLAHRHGVVVIPG 349
             LG       EG  ++               PE+ L+   DF +  WL +  GVV IP 
Sbjct: 348 DELG-LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406
Query: 350 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
                + H + +   L    CK  A  L   +E L
Sbjct: 407 TEFYIKEHEKAAENLLRFAVCKDDA-YLENAVERL 440

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 143/351 (40%), Gaps = 42/351 (11%)
Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA--- 120
           YG ++G   LR A+ +   ++  +  + V V+ GA      + L L   G +V +     
Sbjct: 108 YGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL---GSNVTIAVQDP 164
Query: 121 --PYYFNSYMSFQMTGVTH--------ILVGPCS-SKTLHPDADWLEKTLETKPTPKLVS 169
             P Y +S +    TG  H        ++  PC  + +  PD       L   P   ++ 
Sbjct: 165 TFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPD-------LAMTPRTDVIF 217
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVV 223
             +P NP+G     + L ++ D  K  GS ++ D+ Y  F+ DG      E     +  +
Sbjct: 218 FCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAI 277
Query: 224 NLFSFSKAYGMMGWRVGYIAYPSEV---EGFA--TQLLKVQDNIPICASIISQHLALYSL 278
            + SFSK  G  G R+G+   P E+    GF       ++       AS I+Q   L  L
Sbjct: 278 EVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACL 337
Query: 279 QTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 337
            +G       V +  + NR+I+ + L  LG   V GG  A YLW     K    ++V   
Sbjct: 338 SSGGLKEIRSVNNYYKENRKILMDTLVSLGL-KVYGGVNAPYLWVHF--KGSKSWDVFNE 394
Query: 338 LAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           +     ++ +PG   G  G  +LRIS  G   D    A+ RL+       K
Sbjct: 395 ILENTHIITVPGSGFGPGGEEYLRISGFGR-RDHIVEASKRLQNFFNTRTK 444

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 165/413 (39%), Gaps = 41/413 (9%)
Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68  EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     K+ Q        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
                 +M G   + + P  SK         +DW    + LE+K + K  +++   P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFS 229
            G     + L+ I+DLC    +  + D  Y   +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 283
           K + + GW++G+   P+ +      L  VQ N       P+ A++             PE
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 284 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 333
            +     K+L   R+ +   L+ +G   +   GG   I     L A L + + D   D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
            V+W+     +  IP  A  C    +  F  LV   C    D      EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 40/336 (11%)
Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D GLP LR  L +   +   +    + ++ GA      + L+      +V +  P Y
Sbjct: 71  YGPDFGLPALRQKLSEDFYR-GFVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY 128
Query: 124 FNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
             +Y+   ++TG   I+  PC    L  +A + E   +T     ++ + +P NP+GT + 
Sbjct: 129 -PAYLDIARLTGAKEIIALPC----LQENAFFPEFPEDTHI--DILCLCSPNNPTGTVLN 181
Query: 183 ERLLKRISD---------LCKAAGSWLVVD----NTYFMYDGRKHCCVEGDHVVNLFSFS 229
           +  L+ I           L  AA S  + D     + F     + C +E    +N  SFS
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE----IN--SFS 235
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------NIPICASIISQHLALYSLQTGPE 283
           K  G  G R+G+   P E+  +A     +QD           ASI +Q   +  L   P+
Sbjct: 236 KPLGFAGIRLGWTVIPQELT-YADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQ 294
Query: 284 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 343
              E +     N +++R+AL   G   V GGE A YLW +  + ++ D ++  +    + 
Sbjct: 295 L--EAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYH 351
Query: 344 VVVIPGGACGCRGHLRISFGGL-VEDDCKAAADRLR 378
           + + PG   G  G   + F  L   +D  AA +RL+
Sbjct: 352 IAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 164/413 (39%), Gaps = 41/413 (9%)
Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68  EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     K+ Q        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
                 +M G   + + P  SK         +DW    + LE+K + K  +++   P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFS 229
            G     + L+ I+DLC    +  + D  Y   +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 283
             + + GW++G+   P+ +      L  VQ N       P+ A++             PE
Sbjct: 240 XTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 284 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 333
            +     K+L   R+ +   L+ +G   +   GG   I     L A L + + D   D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
            V+W+     +  IP  A  C    +  F  LV   C    D      EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
            +K+ALE     + ++ +LV  + + +SLA G+    P     E +++++      +   
Sbjct: 54  FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 110
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
             +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD VV+ 
Sbjct: 111 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 170
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
           AP Y  +  +F      +I + P   + +    + LE+ L E K   K V VV       
Sbjct: 171 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 227
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSF 228
           NP+G  + E   K + +L       +V D+ Y    Y G     ++       V+ L +F
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 286
           SK     G+R+G++       G   ++   + +  +C ++  Q +A   +  G   + + 
Sbjct: 288 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 343
Query: 287 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344
           E  K     R+ + EAL       VK    EG +++W  LP+  +D  +++   A + GV
Sbjct: 344 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 401
Query: 345 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
             +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 402 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
            +K+ALE     + ++ +LV  + + +SLA G+    P     E +++++      +   
Sbjct: 9   FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 65
Query: 61  ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
             +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD VV+ 
Sbjct: 66  ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 125
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
           AP Y  +  +F      +I + P   + +    + LE+ L E K   K V VV       
Sbjct: 126 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 182
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSF 228
           NP+G  + E   K + +L       +V D+ Y    Y G     ++       V+ L +F
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 286
           SK     G+R+G++       G   ++   + +  +C ++  Q +A   +  G   + + 
Sbjct: 243 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 298
Query: 287 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 344
           E  K     R+ + EAL       VK    EG +++W  LP+  +D  +++   A + GV
Sbjct: 299 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 356
Query: 345 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
             +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 357 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 36/353 (10%)
Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQAF 102
           P+ A+E + + +   ++  Y    GLP LR  + +   +     L    V++T G++  F
Sbjct: 46  PRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLET 161
           +     L D+GD V + AP Y +     +  G+  + +       L P  AD+    L  
Sbjct: 105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAG 164
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE- 218
                 + V +P NP+GT +       + +  +A G+  + D  Y    Y+ +    +E 
Sbjct: 165 ------LXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL 218
Query: 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278
            D    + SFSK +   GWRVG+   P   E     + ++  N  ICA   SQ  AL +L
Sbjct: 219 TDECYVINSFSKYFSXTGWRVGWXVVP---EDQVRVVERIAQNXFICAPHASQVAALAAL 275
Query: 279 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338
               E +   +     NR++  E L   G   +   +GA Y++A + +   D       +
Sbjct: 276 DCDAE-LQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334
Query: 339 AHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
             + GV V PG       GA    G LR S+        +A AD +  GL+ L
Sbjct: 335 LEKAGVAVTPGLDFDPERGA----GTLRFSY-------ARATAD-IEEGLDRL 375

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 25/240 (10%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P +F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
                + D  Y   +YDG +H  +       +  + + S  K +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI 265

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 134/314 (42%), Gaps = 33/314 (10%)
Query: 92  VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
           V++T G+ QA   +     D G  V++ AP Y  +  +F++ G   + V P   +   PD
Sbjct: 94  VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PD 150
Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FM 208
            D LE+ L+ +    L  + +  NP+G   P    KR+  +    G  +V D+ Y   + 
Sbjct: 151 LDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYF 210
Query: 209 YDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 261
            + R     E         V+ L SFSK     G RV + +A+P  ++    +L++ +  
Sbjct: 211 GEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQ----KLVQAKQG 265
Query: 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR------EIIREALSPLGEGAVKGGE 315
             +   +++Q L    L+ G     ERV+ + R +       + RE    +     KGG 
Sbjct: 266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG- 324
Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCK 371
             +++W  LP K L    + R  A    V  +PGG      G    LR+S+  L  +   
Sbjct: 325 --MFVWMELP-KGLSAEGLFRR-ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIA 380
Query: 372 AAADRLRRGLEELV 385
               RL R L+ L+
Sbjct: 381 EGVRRLGRALKGLL 394

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 32/309 (10%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--KLNQENKLYKSSVMVTAGANQ 100
           + P++  E++ E    P +  Y    G+ ELR+A     K  Q   +   +V+VT G ++
Sbjct: 56  KTPEVFFERIYE--NKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSE 113
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
           A +     + + GD +++  P+Y N     ++ GV  I   P + +    +   + + LE
Sbjct: 114 AILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLI---PVTRRX--EEGFAIPQNLE 168
Query: 161 TKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKH 214
           +    +   +V  NP NP+G    +   + + ++ +  G +L+VD  Y    F  +    
Sbjct: 169 SFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA 228
Query: 215 CCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
             +E D VV + S S  +   G RVG  I    E+   A +L + +   P+   I S  +
Sbjct: 229 LSIESDKVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGS--V 286
Query: 274 ALYSLQTGPEWVTERVKDLVRN--REIIREALSPLGEGAVK---GGEGAIYLWARLPEKH 328
            L +L        +   D VR   RE +   L  L E  +K      GA Y+ A LP + 
Sbjct: 287 GLLNLD-------DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVED 339
Query: 329 LDDFEVVRW 337
            ++F   RW
Sbjct: 340 AEEF--ARW 346

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P +F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
                + D  Y   +YDG +H  +       +  + + S    +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 31  NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
           + V+L QG   + PP  A+E  +  V  D  +++Y    G P L   L     + L QE 
Sbjct: 29  DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
              ++ V+VT G   A       L D GD V++  P +F+ Y     M G   + V    
Sbjct: 89  DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEP-FFDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
           GP  +  L   ++W    +E     T  T  LV +  P NP G       L+ ++ LC+ 
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
                + D  Y   +YDG +H  +       +  + + S    +   GW+VG++  P  +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 159/391 (40%), Gaps = 49/391 (12%)
Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
           M +   L KR   +   + V+  +L    K  ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59  PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
           P  ++Y    G P L  AL K  +Q      N +  + V+VT GA +A    +    D G
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
           D V++  P +F+ Y  M     G+   + + P  +      ADW      LE     K  
Sbjct: 126 DEVIIIEP-FFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK-- 182
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEG 219
            K++ +  P NP G  +    L+ +++LCK      V D  Y   +++  +H   C + G
Sbjct: 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 220 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 274
             +  + + S  K + + GW++G+   P   E     L  V  N +  CA+ I + +A  
Sbjct: 243 MWERTITIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 275 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 327
               L  L++   +      +L+  R+ +   L+ +G      +GG   +  W+ L  K 
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 328 -------HLDDFEVVRWLAHRHGVVVIPGGA 351
                     D+   +W+    G+  IP  A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 30/353 (8%)
Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVW-DPSISKYGADEGLPELR 74
           +M +  EL +     +SLA G    +  P  +  E  KE++  +P    Y    G+PELR
Sbjct: 22  VMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELR 81
Query: 75  DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
           + L   L + + L  S  ++++T G   A   +   L D GD V+   P Y N+ ++F+ 
Sbjct: 82  EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQ 141
Query: 133 TGVTHILVGPCSSKTLHPDADWLE---KTLETKPTP-KLVSVVNPG-NPSGTYIPERLLK 187
            G   I   P  +  +    D LE   K L+ K    KL+  +  G NP G  +     K
Sbjct: 142 LG-AKIEGVPVDNDGMR--VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRK 198
Query: 188 RISDLCKAAGSWLVVDNTY-FM-YDG-----RKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240
            + ++       ++ D  Y FM Y+G      K    EG  V+   + SK  G  G+R+G
Sbjct: 199 ALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSKVLG-TGFRIG 256
Query: 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNRE 297
           +I    E+     ++L  +  I  CA  ISQ++AL  L+ G      +   +      R+
Sbjct: 257 WIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313
Query: 298 IIREAL-SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
           I+ +AL + L           +++   LPE   D       L  R GVVV+PG
Sbjct: 314 IMLKALENHLPNAEFTKPIAGMFVMFFLPEGA-DGISFANELMEREGVVVVPG 365

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 55/342 (16%)
Query: 63  KYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            YG  EG P  + ++       ++LY       ++ T GA  A + ++ +L + GD V+ 
Sbjct: 58  NYGWIEGSPAFKKSV-------SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVIS 110
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
             P Y   Y   +  G    L          PD + L + +  +PT K + + N  NP+G
Sbjct: 111 LYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKXICINNANNPTG 168
Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLF-------SFSKA 231
                  L+ + ++    G++++ D  Y     R    ++   ++ ++       S S  
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVY-----RSFSELDVPSIIEVYDKGIAVNSLSXT 223
Query: 232 YGMMGWRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTERVK 290
           Y + G R+G++A   +V    T +L+  +D   ICA +    +A  +L    E       
Sbjct: 224 YSLPGIRIGWVAANHQV----TDILRDYRDYTXICAGVFDDLVAQLALAHYQEI------ 273
Query: 291 DLVRNREIIREALSPLGE--------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 342
            L RNR I+ E L+ L +          ++    +        +   +DF     L   H
Sbjct: 274 -LERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXEDF--CLQLLQEH 330
Query: 343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           GV+++PG      G++R+ F       C+   + L +GLE+L
Sbjct: 331 GVLLVPGNRFERDGYVRLGFA------CE--QETLIKGLEKL 364

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 60  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 118
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 119 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 177
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y      
Sbjct: 178 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 237
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
                  M   +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 238 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 295
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 296 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 350
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 351 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 407
Query: 362 FGGLVEDDCKAAADRLR 378
           F  L E     A  RL+
Sbjct: 408 FANLPERTLDLAMQRLK 424

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 62  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y      
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
                  M   +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 362 FGGLVEDDCKAAADRLR 378
           F  L E     A  RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 24/358 (6%)
Query: 33  VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---K 89
           ++ A G+     P+  ++  ++ +  P   KYGA  G    + A+V    ++  +    +
Sbjct: 50  INXAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKE 109
Query: 90  SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
             V +  G     V +   + + GD V++  P Y +      +     +   P + +  H
Sbjct: 110 DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPV---PLNLEPPH 166
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F 207
              DW +   +     KL+ +  P NP+G+   + +        K   + +V D  Y  F
Sbjct: 167 YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF 226
Query: 208 MYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 263
            +D +    +      D  + ++S SK Y   G+RVG+     +       L K Q +  
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX---IQALKKYQTHTN 283
Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
                  Q  A+Y+L    +++ E+  ++ + R    EA     +      +G IY+W  
Sbjct: 284 AGXFGALQDAAIYALNHYDDFLEEQ-SNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLE 342
Query: 324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCK--AAADRL 377
            P  + D  +  ++L     ++V PG   G  G  ++RIS   L  DD K   AA RL
Sbjct: 343 TPPGY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS---LALDDQKLDEAAIRL 396

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 153/377 (40%), Gaps = 53/377 (14%)
Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
            P   A +K  E ++   ++ +    GLP  + A+V  + +   NK+    + +++TAGA
Sbjct: 62  NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99  NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
             A    +  L D G++V++  PYY  F+  + ++ TGV  + +   SS         LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY------ 206
           +  +      L    V V NP NP GT +    L  +    +  G  L+ D  Y      
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 207 ------FMYDGRKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 253
                  M   +   C E        HVV  +S SK  G+ G+RVG I    + V   AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 254 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 310
           ++           S  +QHL    L   +    ++ E  K L + ++ +   L   G   
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 311 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 361
           + G  G ++ W  +  +HL        + E+ + + +   + + PG +C C   G  R+ 
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 362 FGGLVEDDCKAAADRLR 378
           F  L E     A  RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 158/391 (40%), Gaps = 49/391 (12%)
Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
           M +   L KR   +   + V+  +L    K  ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59  PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
           P  ++Y    G P L  AL K  +Q      N +  + V+VT GA +A    +    D G
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
           D V++  P +F+ Y  M     G+   + + P  +      ADW      LE     K  
Sbjct: 126 DEVIIIEP-FFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK-- 182
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEG 219
            K++ +  P NP G  +    L+ +++LCK      V D  Y   +++  +H   C + G
Sbjct: 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 220 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 274
             +  + + S    + + GW++G+   P   E     L  V  N +  CA+ I + +A  
Sbjct: 243 MWERTITIGSAGXTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 275 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 327
               L  L++   +      +L+  R+ +   L+ +G      +GG   +  W+ L  K 
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 328 -------HLDDFEVVRWLAHRHGVVVIPGGA 351
                     D+   +W+    G+  IP  A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 46/357 (12%)
Query: 60  SISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
           +I+ +    GLPE R A+ K + +      +     V++  GA  A   I+  L D GD+
Sbjct: 75  AIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA 134
Query: 116 VVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VS 169
            ++ +PYY  FN  + ++ TGV  I +   SS      +  +++  E      +    + 
Sbjct: 135 FLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--------------MYDGRKHC 215
           + NP NP GT + +  LK +          LV D  Y               + D ++  
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253
Query: 216 CVEGDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQ-----LLKVQDNIPICASII 269
               D V  ++S SK  G+ G+RVG I ++  +V   A +     L+  Q    + A + 
Sbjct: 254 YCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLS 313
Query: 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR----LP 325
            +      L+     + +R K      E++       G   +K   G ++ W      L 
Sbjct: 314 DEKFVDNFLRESAMRLGKRHKHFTNGLEVV-------GIKCLKNNAG-LFCWMDLRPLLR 365
Query: 326 EKHLD-DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 379
           E   D +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR
Sbjct: 366 ESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 132/338 (39%), Gaps = 48/338 (14%)
Query: 62  SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA- 120
           S YGA++G   LR+A+              + ++ G+           CD     +MF  
Sbjct: 105 SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK----------CDIARIQMMFGS 154
Query: 121 -----------PYYFNSYMSFQMTGVTHILVGPCSSKTL--HPDADWLEKTLETKPTPKL 167
                      P Y ++ +   MTG  H   G    + +  +PD  +     + K T  +
Sbjct: 155 KPTVAVQDPSYPVYVDTSVMMGMTG-DHNGTGFDGIEYMVCNPDNHFFPDLSKAKRT-DI 212
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHC------CVEGDH 221
           +   +P NP+G       L  + +  +  GS LV D  Y +Y     C          D 
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADE 272
Query: 222 V-VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPIC---ASIISQHLAL 275
           V +   SFSK  G  G R+G+   P  ++    + +    N  +  C   AS I Q   L
Sbjct: 273 VAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGL 332
Query: 276 YSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332
             LQ  PE + E    +K    N +I++   + +G  +V GG+ A Y+W   P K    +
Sbjct: 333 ACLQ--PEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--PSW 387
Query: 333 EVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVED 368
           +V   +  R  +V  PG   G    G +R S  G  E+
Sbjct: 388 DVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSREN 425

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y MY    +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
            R    + G   V +   SFSK  G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 49/348 (14%)
Query: 61  ISKYGADEGLPELRDA----LVKKLNQENKLYKSSVMVTAGANQA---FVNIVLTLCDAG 113
           + KY    GLPELR A    L ++ +       + ++   G+ +A   FV  VL     G
Sbjct: 59  LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDG 118
Query: 114 DSVVMFAPY-YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
               + +P  ++  Y    + G   I    C + + +PD  W   + E     KLV V +
Sbjct: 119 IKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPD--WRSISEEVWKRTKLVFVCS 176
Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-CVEG--------DH 221
           P NPSG+ +     K + DL    G  +  D  Y    +DG K   C++           
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236
Query: 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 281
           ++   S S    + G R G++A  +E+       L  +       SI  Q  ++ +    
Sbjct: 237 LLXFTSLSXRSNVPGLRSGFVAGDAEL---LKNFLLYRTYHGSAXSIPVQRASIAA---- 289
Query: 282 PEWVTERVKDLVRNREIIREALS---PLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVR 336
             W  E  + ++ NR + +E      P+ +    VK  + + Y+W ++P+   DD    R
Sbjct: 290 --WDDE--QHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDG--DDLAFAR 343
Query: 337 WLAHRHGVVVIPG---------GACGCRGHLRISFGGLVEDDCKAAAD 375
            L  +  + V+PG         G  G  G++RI+    V    KAA D
Sbjct: 344 NLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRIALVADVATCVKAAED 390

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 171/397 (43%), Gaps = 44/397 (11%)
Query: 21  QIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKEL---VWDPSISK---YGADEGLPE 72
           +++EL++     + +SLA G+    P    +E +K++   V +    K   YG  +G   
Sbjct: 30  EVRELLKLVETSDVISLAGGLP--APETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP 87
Query: 73  LRDALVKKLNQ--ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
           LR AL + + +  +  + K  +M  AG+ QA   I     + GD +V+ AP Y  +  +F
Sbjct: 88  LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF 147
Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLK 187
           +      I + P   K +  D    +     K   +   + +V    NP+G  +     K
Sbjct: 148 KYYDPEFISI-PLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 206
Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGR-----KHCCVEGDHVVNLFSFSKAYGMMGWRVG 240
           ++ +L       +V D  Y    Y G      KH    G  V+ L +FSK     G+R+G
Sbjct: 207 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG-RVIYLGTFSKILA-PGFRIG 264
Query: 241 YI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR----N 295
           ++ A+P  +     ++   + +I +C +   Q +A   ++ G  ++ E +  ++      
Sbjct: 265 WVAAHPHLIR----KMEIAKQSIDLCTNTFGQAIAWKYVENG--YLDEHIPKIIEFYKPR 318
Query: 296 REIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 353
           R+ + EAL       V+    EG +++   LPE       + R +A   GV  +PG A  
Sbjct: 319 RDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMERAVA--KGVAYVPGEAFF 376
Query: 354 C----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
                +  +R++F  + E+  +    RL   ++E +K
Sbjct: 377 VHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMK 413

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y MY    +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
            R    + G   V +   SFS+  G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 177/429 (41%), Gaps = 55/429 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 XKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY---D 210
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+      
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 211 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267
           GR    +  D    V+   SFSK     G R+G++  P  +       ++V    P   +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 268 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 320
             +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 321 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 374
           W ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A 
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 375 DRLRRGLEE 383
             L + ++E
Sbjct: 415 QVLAQLIKE 423

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 177/429 (41%), Gaps = 55/429 (12%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY---D 210
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+      
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 211 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 267
           GR    +  D    V+   SFSK     G R+G++  P  +       ++V    P   +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 268 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 320
             +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 321 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 374
           W ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A 
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 375 DRLRRGLEE 383
             L + ++E
Sbjct: 415 QVLAQLIKE 423

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 23/273 (8%)
Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK 146
           ++ V+VT GA +A    VL L + G  V++  P+Y +SY         H +  P     +
Sbjct: 86  ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTVPLVPDGR 144
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               DAD L + +   P  + + + +P NP+G  +    L  I+++  AA   ++ D  Y
Sbjct: 145 GFALDADALRRAV--TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVY 202
Query: 207 --FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGF--ATQLL 256
              ++D  +H  + G     +  + + S +  +   GW++G+   P+E + G   A Q L
Sbjct: 203 EHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYL 262
Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316
                 P       Q     +L T   WV      L   R+ +   L+ +G  AV    G
Sbjct: 263 SYVGGAPF------QPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVHDSYG 315
Query: 317 AIYLWAR-LPEKHLDDFEVVRWLAHRHGVVVIP 348
             +L A   P  + D  E    L  + GV  IP
Sbjct: 316 TYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP 348

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 119/308 (38%), Gaps = 45/308 (14%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA           
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
           CD     VMF             P Y +S +    TG  +  V   G        P+  +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
               L T     ++   +P NP+G       L ++ +  K  GS +V D+ Y MY    +
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 211 GRKHCCVEGDHVVNL--FSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 265
            R    + G   V +   SFS   G  G R+G+   P ++   +GF    +    N  IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 266 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 319
                AS ISQ  AL  L   G E + + +     N  II +  + LG   V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 320 LWARLPEK 327
           +W   P +
Sbjct: 365 VWVHFPNQ 372

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+     K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
                     V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 134/353 (37%), Gaps = 36/353 (10%)
Query: 22  IQELVRGAK---NAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           ++ L+RGA      V  + G V   +P   A +     V    +  Y    G   +RD L
Sbjct: 28  LEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLL 87
Query: 78  VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQM 132
             +L          +  +++T G   A    V      GD V +  P YF     + F  
Sbjct: 88  APRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFE 147
Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
                + +   S+       D        K   ++    NP NP+G       + +I+ L
Sbjct: 148 GEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAAL 207
Query: 193 CKAAGSWLVVDNTY--FMYDG------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244
               G+ ++ D  Y    Y G      R    V+ ++VV +   S    + G+R+G +A+
Sbjct: 208 AARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG-VAF 266
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
            S       +  K+Q  + + A+  SQ +        P W  +R+    R++ I  E L 
Sbjct: 267 GSRA--IIARXEKLQAIVSLRAAGYSQAVLRGWFDEAPGWXEDRI---ARHQAIRDELLH 321
Query: 305 PLGEGAVKGGEGAI--------YLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
            L     +G EG          YL+ RLP+  +   E V+ L  + GVVV PG
Sbjct: 322 VL-----RGXEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPG 369

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+     K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
                     V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 177/430 (41%), Gaps = 57/430 (13%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+     K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
                     V+G  V+   SFSK     G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 142/353 (40%), Gaps = 49/353 (13%)
Query: 15  EMPIMVQIQELVRGAKNA----VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGL 70
           E  + + + E  R A+      + L+ G     PP+  ++ + E + DP+   Y      
Sbjct: 6   EPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC----- 60
Query: 71  PELRDALVKKLNQENKLY----------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
             L+   +  L +  + Y          +   +   G+ +   +++L L +  D +++  
Sbjct: 61  --LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPED-LLLLP 117
Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLH-----PDADWLEKTLETKPTPKLVSVVNPGN 175
              + SY            + P     L      P+  W E         K++ +  P N
Sbjct: 118 EVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREA--------KVLLLNYPNN 169
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--MYDGRKHCCVE----GDHVVNLFSFS 229
           P+G        +    L +  G WL+ DN Y   +Y+G     +      + VV LFS S
Sbjct: 170 PTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLS 229
Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
           K+Y + G+R+G+ A  SE E  A +L +V+  I          + + +L+T P+ V    
Sbjct: 230 KSYNLAGFRLGF-ALGSE-EALA-RLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGY 285
Query: 290 KDLVRNREI-IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341
             + R R + + EAL   G  ++      +YLW RLPE  +DD E    L  R
Sbjct: 286 ARVYRERALGMAEALK--GVLSLLPPRATMYLWGRLPE-GVDDLEFGLRLVER 335

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+  +    D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E          +V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
           + + G  +     + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 232 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 273

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+  +    D  V F P Y + Y  F        L  P +  
Sbjct: 86  LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 140
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E  +        V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 141 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 188
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
           + + G  +     + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 189 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 243
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
             S +SQ  A  +L    E   ER K +V  RE ++ AL  +G
Sbjct: 244 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 285

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 176/430 (40%), Gaps = 57/430 (13%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 4   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 63
Query: 56  VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL    +   +K  N     Y  S     + VT+G+ Q  
Sbjct: 64  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 123
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 124 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 182
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+     K
Sbjct: 183 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 242
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
                     V+G  V+   SFS      G R+G++  P  +       ++V    P   
Sbjct: 243 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 300
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 301 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 357
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 358 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 415
Query: 374 ADRLRRGLEE 383
              L + ++E
Sbjct: 416 FQVLAQLIKE 425

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 176/430 (40%), Gaps = 57/430 (13%)
Query: 3   SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
           +YA+   A  A     PI      L RG K+ +SLA G+       ++   + +E  K +
Sbjct: 2   NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56  VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
            +   + K    Y    G+PEL   L    +K  N     Y  S     + VT+G+ Q  
Sbjct: 62  QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
             +   + + GD+V++  P Y  +  S    G   I V    S  + PD      + W  
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
           +  +   K TPK L +V N  NP+G  +     K I +L +     ++ D+ Y+     K
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 HCC-------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
                     V+G  V+   SFS      G R+G++  P  +       ++V    P   
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 267 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 319
           +  +ISQ L  +  + G     +RV D   N++  I+  A   L+ L E  V      ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 320 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 373
           LW ++  K ++D  E++   A + GV+++PG A          +LR SF     +    A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 374 ADRLRRGLEE 383
              L + ++E
Sbjct: 414 FQVLAQLIKE 423

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 151/383 (39%), Gaps = 87/383 (22%)
Query: 43  QPPKMAMEKVKELVWDPSISK---------------YGADEGLPELRDALVKKLNQENKL 87
            P  +  E++K L    SIS+               Y   +G+  LRDA+   +   +  
Sbjct: 94  HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGF 153
Query: 88  YKSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
             ++  + +T GA+   V++++ L   +  D +++  P Y     S  + G      G  
Sbjct: 154 PANADDIFLTDGASPG-VHLMMQLLIRNEKDGILVPIPQYPLYSASIALHG------GAL 206
Query: 144 SSKTLHPDADW------LEKTLETKPTP----KLVSVVNPGNPSGTYIPERLLKRISDLC 193
               L+    W      ++K LE   +     + + V+NPGNP+G  + E     I   C
Sbjct: 207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFC 266
Query: 194 KAAGSWLVVDNTY---FMYDGRKHCCVE--------GDHVVNLFSFSKA----YGMMGWR 238
           K  G  L+ D  Y      D +K    +        G+  + L S+       YG  G R
Sbjct: 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKR 326
Query: 239 VGYIAYPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGPEWVTER------ 288
            GY     E+ GF+     Q+ K+  ++ +C++I  Q LA  SL   P   ++       
Sbjct: 327 GGYF----EITGFSAPVREQIYKIA-SVNLCSNITGQILA--SLVMNPPKASDESYASYK 379
Query: 289 ------VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR--LPEKHL----------D 330
                 +  L R  + +  A + L        EGA+Y++ +  LP+K +          D
Sbjct: 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPD 439
Query: 331 DFEVVRWLAHRHGVVVIPGGACG 353
            F  +R L    G+VV+PG   G
Sbjct: 440 AFYALRLL-ESTGIVVVPGSGFG 461

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 118/301 (39%), Gaps = 31/301 (10%)
Query: 50  EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
           +K  EL      S YGA++G   LR A+ K       +    V V+ GA     +I    
Sbjct: 80  KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---CDISRLQ 136
Query: 110 CDAGDSVVMFA-----PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADWLEKTLET 161
              G +V +       P Y +S +    TG  +  V   G        P+  +    L T
Sbjct: 137 VXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPD-LST 195
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY----DGRKHCCV 217
                ++   +P NP+G       L ++ +  K  GS +V D+ Y  Y    + R    +
Sbjct: 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEI 255
Query: 218 EGDHVV--NLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC-----AS 267
            G   V     SFSK  G  G R+G+   P ++   +GF    +    N  IC     AS
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIICTCFNGAS 312
Query: 268 IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326
            ISQ  AL  L   G E   + +     N  II +  + LG   V GG+ A Y+W   P 
Sbjct: 313 NISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPYVWVHFPN 371
Query: 327 K 327
           +
Sbjct: 372 Q 372

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 87  LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
           L K++V V  GA++    I+       D  V F P Y + Y  F        L  P +  
Sbjct: 74  LSKNNVSVGNGADE----IIYVXXLXFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
              P+ +  E  +        V + NP NP+G       ++RI       G+++ +D  Y
Sbjct: 129 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 264
           + + G  +     + +++  + +FSKA+ +   RVGY+      E F     +V+  +P 
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
             S +SQ  A  +L    E   ER K +V  RE  + AL   G
Sbjct: 232 NVSYVSQXFAKVALDHR-EIFEERTKFIVEERERXKSALREXG 273

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 35/355 (9%)
Query: 22  IQELVRGA--KNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRD 75
           I+E+++ A  K+A+S   GV   +  P K   E  KE++        +Y   EG P L+ 
Sbjct: 33  IREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92
Query: 76  ALVKKLNQE---NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
            ++K L +      L + +++ T G+ QA   I     D     V+  P Y  +  +F+ 
Sbjct: 93  QILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQ 152
Query: 133 TGVTHILVGPCSS-----KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
             + + +V P          L       +K  + K    +  V N  NP+G        K
Sbjct: 153 Y-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211
Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGY 241
            + ++ +    ++V D+ Y    Y+G     +      + VV L +FSK     G R+G 
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAP-GLRIGX 270
Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREII 299
           +A   E   F  ++++ + +  +C+  I+  LA   L+     E +   ++   R R + 
Sbjct: 271 VAGSKE---FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVX 327
Query: 300 REALSPL-----GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
             AL        G   VK  EG +++W  LPE   D +E   + A R  V  +PG
Sbjct: 328 LNALEEYFSDIPGVKWVKS-EGGLFIWLTLPE-GFDTWEXFEY-AKRKKVFYVPG 379

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
           A+++   Q   +    V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  G
Sbjct: 62  AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           V          +T+    +W   L+   +     K+V V +P NP+G  I  +  + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
           L +   + +V D  Y  +  +        E  H+  L + SKA+ + G R G+     EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 249 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
                 L+KV    P+    A I +Q L+      G   + ERV  ++  RE +  AL
Sbjct: 233 INL---LMKVIAPYPLSTPVADIAAQALS----PQGIVAMRERVAQIIAEREYLIAAL 283

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 26/238 (10%)
Query: 76  ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
           A+++   Q   +    V+V+ GA++    ++   C+ G   +++ P  +  Y +S +  G
Sbjct: 62  AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           V          +T+    +W   L+   +     K+V V +P NP+G  I  +  + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
           L +   + +V D  Y  +  +        E  H+  L + SKA+ + G R G+     EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 249 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
                 L KV    P+    A I +Q L+      G     ERV  ++  RE +  AL
Sbjct: 233 INL---LXKVIAPYPLSTPVADIAAQALS----PQGIVAXRERVAQIIAEREYLIAAL 283

>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Np_281508.1) From Campylobacter Jejuni At 2.01 A Resolution Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 52/249 (20%)
Query: 28  GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
           G K  + LA     +  P  A+E +++   + + +    D+   EL+  L +K   +N+ 
Sbjct: 28  GVKEVIKLASNENPFGTPPKAIECLRQ---NANKAHLYPDDSXIELKSTLAQKYKVQNE- 83
Query: 88  YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVT----HILVGP 142
              ++++ AG++Q               V+ FA +   NS  +F   GVT     I    
Sbjct: 84  ---NIIIGAGSDQ---------------VIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 143 CSSK-----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI----PERLLKRISDL 192
           C +K     ++  + D  +K  ET K   KL+ +  P NP G  +        +K +++ 
Sbjct: 126 CGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED 185
Query: 193 CKAAGSWLVVDNTYFMY----DGRKH---CCV--EGDHVVNLFSFSKAYGMMGWRVGY-I 242
           C      +V+D  Y  +    D +KH   C +  E D+V+ L +FS  YG+ G R+GY I
Sbjct: 186 C-----LVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGI 240
Query: 243 AYPSEVEGF 251
           A  + +  F
Sbjct: 241 ANANIISAF 249

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 124/319 (38%), Gaps = 31/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 70  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 127
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 128 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 183
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
             +   A   ++VD  Y  +          +     +V   + SKA+   G R+GY +A 
Sbjct: 184 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 244 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 296
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 297 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 347
Query: 365 LVEDDC--KAAADRLRRGL 381
             E+D    AAA+ ++  L
Sbjct: 348 PEENDAFLDAAAEIIKLNL 366

>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase Length = 546

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K     P  K+   VNP NP    + +R L+R+ ++       L++  D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 --FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
             F  D +    +  ++ + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328

>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 546

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K     P  K+   VNP NP    + +R L+R+ ++       L++  D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 --FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
             F  D +    +  ++ + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 124/319 (38%), Gaps = 31/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 73  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
             +   A   ++VD  Y  +          +     +V   + SKA+   G R+GY +A 
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 365 LVEDDC--KAAADRLRRGL 381
             E+D    AAA+ ++  L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 20/204 (9%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDG-RKHCCVEGDHVVNLF 226
           V + NP NP+G  +    L    D  +     L++D TY  Y   R      G++ +   
Sbjct: 139 VVLANPSNPTGQALSAGEL----DQLRQRAGKLLIDETYVDYSSFRARGLAYGENELVFR 194
Query: 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGPEWV 285
           SFSK+YG+ G R+G +  PSE+      +   +     C    +  H    +L       
Sbjct: 195 SFSKSYGLAGLRLGALFGPSEL------IAAXKRKQWFCNVGTLDLHALEAALDNDRARE 248
Query: 286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345
               K L + R +  +AL  LG          + +     E+ L      R+L  R G+ 
Sbjct: 249 AHIAKTLAQRRRVA-DALRGLGYRVASSEANFVLVENAAGERTL------RFLRER-GIQ 300
Query: 346 VIPGGACGCRGHLRISFGGLVEDD 369
           V   G  G   H+RIS G   ++D
Sbjct: 301 VKDAGQFGLHHHIRISIGREEDND 324

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM 208
           D + L+  +     P +V +VNP NP+GT  P  +++      K A +  +VD  Y  F+
Sbjct: 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWI-ASKPANTXFIVDEAYAEFV 186
Query: 209 YDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGY-IAYPS 246
            D R            ++++ L +FSK +   G RVGY +A+P+
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAVAHPT 230

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 12/260 (4%)
Query: 84  ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
           E  L    V++T+G +QA    +  L + G ++++  P +       +  G+   L    
Sbjct: 90  EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
             K+   D   LE  ++ K T  LV V NP NP G+   +R L++I  + +     ++ D
Sbjct: 150 PEKSWEIDLKQLESLIDEK-TACLV-VNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 204 NTY---FMYDGRKHCCVEGDHVVNLFS---FSKAYGMMGWRVGYIAYPSEVEGFATQ--- 254
             Y      D +          V + S    +  + + GWR+G+I      + F  +   
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRD 267
Query: 255 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 313
            L+K+   I    +I+   L     +T  E+  + +  L  N ++   ALS +       
Sbjct: 268 GLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVR 327
Query: 314 GEGAIYLWARLPEKHLDDFE 333
             GA+YL   +  +H  +FE
Sbjct: 328 PSGAMYLMVGIEMEHFPEFE 347

>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 544

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164
           L  AGD V +  P  F  Y+         +   P  +    PD  W     E      P 
Sbjct: 189 LLKAGDKVAIGMPV-FTPYIEIPELAQYDLKEVPIHAD---PDNGWQYSDAELDKLKDPD 244
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY--FMYDGRKHCCVEGD 220
            K+   VNP NP    + +R L R+  +       L++  D+ Y  F  + +    V   
Sbjct: 245 VKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFADEFQSLFSVCPR 304
Query: 221 HVVNLFSFSKAYGMMGWRVGYIA 243
           + + ++SFSK +G  GWR+G IA
Sbjct: 305 NTLLVYSFSKYFGATGWRLGVIA 327

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 134/348 (38%), Gaps = 35/348 (10%)
Query: 49  MEKVKELVWDPSISKYGADEGLPELRDA--------LVKKLNQENKLYKSSVMVTAGANQ 100
           ++K+KE +     + Y    G PE R+A         V K   ++ + K +V++ +G + 
Sbjct: 56  IKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSH 115
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
             +  +  +CDAGD  ++  P + +     +  G+               D D + +  +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175
Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE 218
            K   KL+ V NP NP G+    + ++ I  L +     L  D  Y   ++ G+      
Sbjct: 176 DK--TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF 233
Query: 219 GDHV--------VNLFSFSKAYGMMGWRVGYIAY-------PSEVEGFATQLLKVQDNIP 263
                       V L   +    + GWR+G++ Y       PS +EG     + V     
Sbjct: 234 TSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCT 293
Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 323
           +  + + + L    L T  E + + V  +  +   +   +      A     GA+YL +R
Sbjct: 294 VVQAALGEAL----LNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349
Query: 324 LP-EKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 367
           +  EK+ D   D E    L     V V+PG      G  R++    VE
Sbjct: 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVE 397

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 123/319 (38%), Gaps = 31/319 (9%)
Query: 72  ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
           ELRD L   + ++    + + ++    G+N+    ++      G + + F P Y  S   
Sbjct: 73  ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
               G     +          D D   + +  K  P +V V  P NP+G       L  +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYFMYDGRKHCCVEGD----HVVNLFSFSKAYGMMGWRVGY-IAY 244
             +   A   ++VD  Y  +          +     +V   + S A+   G R+GY +A 
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246
Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P+ ++  A  L++    +P   S +SQ  A+ +L+   + +   V+ L   R  +   L 
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
            LG  AV   E     +    ++H        W A     V+I     G  GHLR + G 
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 365 LVEDDC--KAAADRLRRGL 381
             E+D    AAA+ ++  L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 14/261 (5%)
Query: 84  ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGP 142
           E  L    V++T+G +QA    +  L + G ++++  P  F+ Y +  +  G+   L   
Sbjct: 113 EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPG-FSLYKTLAESMGIEVKLYNL 171
Query: 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202
              K+   D   LE  ++ K    +V+  NP NP G+   +R L++I  +       ++ 
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVN--NPSNPCGSVFSKRHLQKILAVAARQCVPILA 229
Query: 203 DNTY--FMYDGRKH---CCVEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ-- 254
           D  Y   ++   K+     +  D  +++    +K + + GWR+G+I      + F  +  
Sbjct: 230 DEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIR 289
Query: 255 --LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
             L+K+   I    +I+   L     +T  E+    +  L  N ++   AL+ +      
Sbjct: 290 DGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPV 349
Query: 313 GGEGAIYLWARLPEKHLDDFE 333
              GA+YL   +  +H  +FE
Sbjct: 350 RPSGAMYLMVGIEMEHFPEFE 370

>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme Length = 533

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
           +PD++ L+K  +  P  K+   VNP NP    + ER L+R+  +       L++  D+ Y
Sbjct: 233 YPDSE-LDKLKD--PAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY 289
Query: 207 FMY-DGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
             + DG +    +   + + ++SFSK +G  GWR+G +A
Sbjct: 290 GTFADGFQSLFAICPANTLLVYSFSKYFGATGWRLGVVA 328

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 164 TPKL--VSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYFMY----DGRKHCC 216
           TP L  + +  P NP+G  +PER LL+ I+D CK+    L++D  +  +     G     
Sbjct: 144 TPDLDCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL 202
Query: 217 VEGDHVVNLFSFSKAYGMMGWRVGYI 242
            +  H+  L S +K Y + G R+GY+
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYL 228

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	398
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	5e-64
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	8e-62
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	3e-61
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	4e-57
3nra_A	407	Aspartate aminotransferase; structural genomics, j	5e-57
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	1e-54
3ele_A	398	Amino transferase; RER070207001803, structural gen	2e-54
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	2e-54
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	2e-54
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	3e-54
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	6e-54
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	8e-54
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	1e-53
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	1e-53
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	1e-52
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	3e-52
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	5e-52
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	1e-51
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	2e-51
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	5e-51
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	7e-51
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	8e-51
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	1e-50
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	4e-50
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	9e-50
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	2e-49
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	1e-48
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	2e-48
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	3e-47
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	4e-47
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	6e-46
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	6e-46
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	2e-39
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	1e-38
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	1e-38
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	2e-38
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	6e-38
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	3e-37
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	2e-35
1vp4_A	425	Aminotransferase, putative; structural genomics, j	4e-34
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	4e-34
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	1e-33
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	2e-33
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	3e-33
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	1e-32
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	1e-31
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	7e-29
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	3e-28
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	4e-28
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-26
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	3e-26
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	5e-26
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	6e-26
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	8e-26
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	5e-24
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	6e-24
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	5e-23
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	7e-23
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-22
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	4e-20
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	3e-13
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	6e-12
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	2e-11
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	3e-11
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	1e-10
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	2e-10
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	3e-10
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	4e-09
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	3e-06
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	3e-05
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	5e-05
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	5e-05
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	6e-05
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	9e-05
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	1e-04
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	3e-04
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	5e-04
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	8e-04

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  208 bits (533), Expect = 5e-64
 Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 31/383 (8%)

Query: 16  MPIMVQIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWDPSISKYGADEGLP 71
           M +M   +      +  + +  G    QP    P+ A+E + + +   ++  Y    GLP
Sbjct: 17  MDVMEAARRAEEAGRRIIHMEVG----QPGTGAPRGAVEALAKSLETDAL-GYTVALGLP 71

Query: 72  ELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
            LR  + +   +   +      V++T G++  F+     L D+GD V + AP Y  SY  
Sbjct: 72  ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP-SYRQ 130

Query: 130 F-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
             +  G+  + + P + +  L P                 + V +P NP+GT +    + 
Sbjct: 131 ILRALGLVPVDL-PTAPENRLQPVPADFA-----GLDLAGLMVASPANPTGTMLDHAAMG 184

Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAY 244
            + +  +A G+  + D  Y    Y+ +    +E  D    + SFSK + M GWRVG++  
Sbjct: 185 ALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVV 244

Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
           P +       + ++  N+ ICA   SQ  AL +L      +   +     NR+++ E L 
Sbjct: 245 PEDQ---VRVVERIAQNMFICAPHASQVAALAAL-DCDAELQANLDVYKANRKLMLERLP 300

Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS 361
             G   +   +GA Y++A + +   D       +  + GV V PG         G LR S
Sbjct: 301 KAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFS 360

Query: 362 FGGLVEDDCKAAADRLRRGLEEL 384
           +      D +   DRL   ++  
Sbjct: 361 YARATA-DIEEGLDRLEAFMQAR 382

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  203 bits (519), Expect = 8e-62
 Identities = 89/407 (21%), Positives = 163/407 (40%), Gaps = 43/407 (10%)

Query: 6   KLAKRALE-TEMPI--MVQI-QELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVW 57
             + R L   E PI  +V   +   +       L  G    QP    P++  E++ E   
Sbjct: 15  VFSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIG----QPDLKTPEVFFERIYEN-- 68

Query: 58  DPSISKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDS 115
            P +  Y    G+ ELR+A      +  ++  K   V+VT G ++A +     + + GD 
Sbjct: 69  KPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDE 128

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
           +++  P+Y  +Y +F ++ GV  I V     +        LE  +  + T K + + NP 
Sbjct: 129 ILVLEPFYA-NYNAFAKIAGVKLIPV-TRRMEEGFAIPQNLESFI-NERT-KGIVLSNPC 184

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDHVVNLFSFS 229
           NP+G    +  ++ + ++ +  G +L+VD  Y   ++ G +      +E D VV + S S
Sbjct: 185 NPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVS 243

Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
           K +   G RVG +   +E     +  +K+     +   ++ Q  ++  L     +     
Sbjct: 244 KKFSACGARVGCLITRNEE--LISHAMKLAQGR-LAPPLLEQIGSVGLLNLDDSFFDFVR 300

Query: 290 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL-----AHRHGV 344
           +      E + + L   G        GA Y+ A LP +  ++F   RW+           
Sbjct: 301 ETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEF--ARWMLTDFNMDGETT 358

Query: 345 VVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           +V P           +  +RI+   L +D    A D L  GL+    
Sbjct: 359 MVAPLRGFYLTPGLGKKEIRIAC-VLEKDLLSRAIDVLMEGLKMFCS 404

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  201 bits (513), Expect = 3e-61
 Identities = 66/329 (20%), Positives = 129/329 (39%), Gaps = 16/329 (4%)

Query: 63  KYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
            YG  EG P  + ++ +         K   ++ T GA  A + ++ +L + GD V+   P
Sbjct: 58  NYGWIEGSPAFKKSVSQLYTG----VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113

Query: 122 YYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
            Y        +  G    L          PD + L + +  +PT K++ + N  NP+G  
Sbjct: 114 TYQ-QLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKMICINNANNPTGAV 170

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 238
           +    L+ + ++    G++++ D  Y  F            D  + + S SK Y + G R
Sbjct: 171 MDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIR 230

Query: 239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298
           +G++A   +V      L   +D   ICA +    +A  +L    E +      L  N  I
Sbjct: 231 IGWVAANHQV---TDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAI 287

Query: 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 358
           + + +      +          + ++    +   +    L   HGV+++PG      G++
Sbjct: 288 LDQWIEEEPLVSYIRPAVVSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFERDGYV 346

Query: 359 RISFGGLVEDDCKAAADRLRRGLEELVKD 387
           R+ F    ++      ++L + L    K+
Sbjct: 347 RLGF-ACEQETLIKGLEKLSQFLRRFDKE 374

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  190 bits (486), Expect = 4e-57
 Identities = 87/376 (23%), Positives = 143/376 (38%), Gaps = 46/376 (12%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN 85
             A++L+QG   +  P+   E++        +++    Y    G+  LR+A+ +K  +  
Sbjct: 30  HQAINLSQGFPDFDGPRYLQERLAH-----HVAQGANQYAPMTGVQALREAIAQKTERLY 84

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVG 141
                  S + VTAGA +A    +  L   GD V+ F P Y +SY  +  ++G     + 
Sbjct: 85  GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSY-DSYAPAIALSGGIVKRM- 142

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
                    D       L      +LV +  P NPS T   +     +         +++
Sbjct: 143 ALQPPHFRVDWQEFAALL--SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVI 200

Query: 202 VDNTY--FMYDGRKHCCV---EG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254
            D  Y    +  + H  V       +  V + SF K Y M GW+VGY   P+ +   + +
Sbjct: 201 SDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPI---SAE 257

Query: 255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 314
           + KV   +    +  +Q      L+  PE          + R+I+  AL+      +   
Sbjct: 258 IRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILP-C 316

Query: 315 EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDD 369
           EG  +L         LDD E  +WL   HGV  IP             +R+ F       
Sbjct: 317 EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF------- 369

Query: 370 CK------AAADRLRR 379
            K      AAA+RLR+
Sbjct: 370 AKKESTLLAAAERLRQ 385

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  191 bits (487), Expect = 5e-57
 Identities = 68/345 (19%), Positives = 120/345 (34%), Gaps = 35/345 (10%)

Query: 63  KYGADEGLPELRDALVKKLNQENKL-YKSS--VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
            Y    G   +RD L  +L         +   +++T G   A    V      GD V + 
Sbjct: 73  AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIV 132

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKTL-----HPDADWLEKTLETKPTP--KLVSVV 171
            P YF +     +      + V      +        D   LE+          ++    
Sbjct: 133 QPDYF-ANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAF----KAGARVFLFS 186

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDH----- 221
           NP NP+G       + +I+ L    G+ ++ D  Y    Y G  +               
Sbjct: 187 NPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVV 246

Query: 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 281
            +     SK   + G+R+G       +     ++ K+Q  + + A+  SQ +        
Sbjct: 247 TIM--GPSKTESLSGYRLGVAFGSRAI---IARMEKLQAIVSLRAAGYSQAVLRGWFDEA 301

Query: 282 PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 341
           P W+ +R+      R+ +   L        +  +   YL+ RLP+  +   E V+ L  +
Sbjct: 302 PGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQ 361

Query: 342 HGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEEL 384
            GVVV PG          +R++F     +   AAA R+   +E  
Sbjct: 362 AGVVVTPGTEFSPHTADSVRLNF-SQDHEAAVAAARRIVTLVERY 405

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  185 bits (472), Expect = 1e-54
 Identities = 78/408 (19%), Positives = 149/408 (36%), Gaps = 58/408 (14%)

Query: 24  ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
                 +  ++L QG   + PP+ A+++ ++ +  P +++Y    G P L ++L+K  + 
Sbjct: 51  NSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSP 110

Query: 84  ENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV 140
                 K+  V VT GAN+  ++ ++ L +AGD V++F P++ + Y+   ++ G   + V
Sbjct: 111 IYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFF-DQYIPNIELCGGKVVYV 169

Query: 141 ----GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDL 192
                    +      +W    +  E   T   K V +  P NP G       L  + ++
Sbjct: 170 PINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNI 229

Query: 193 CKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGY-IAY 244
           C      ++ D  Y    +                  + + S  K++   GWR+G+ ++ 
Sbjct: 230 CVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289

Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREA 302
            +E+    +   K    I   +    Q     S+    +  +  +  ++ +   +I    
Sbjct: 290 NAEL---LSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI 346

Query: 303 LSPLG------EGA-------VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
              LG      EG         K      Y +         DF +  WL +  GVV IP 
Sbjct: 347 FDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406

Query: 350 GA-------CGCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 384
                          LR +        CK       A +RL+   + L
Sbjct: 407 TEFYIKEHEKAAENLLRFAV-------CKDDAYLENAVERLKLLKDYL 447

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  184 bits (469), Expect = 2e-54
 Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 43/388 (11%)

Query: 24  ELVRGAKNAVSLAQGVVYWQP----P---KMAMEKVKELVWDPSISKYGADEGLPELRDA 76
             + G +N    + G     P    P      ++++       ++  Y + +G  E R A
Sbjct: 29  AAIVGKENVYDFSIG----NPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAA 84

Query: 77  LVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSF-QM 132
           + + LN  +   + +  + +T GA  +       L  DA D  +  APY F  Y  F   
Sbjct: 85  IAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPY-FPEYKVFVNA 143

Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
            G   + V P  ++    D D LE+ +    T + V + +P NPSGT   E  +K++SDL
Sbjct: 144 AGARLVEV-PADTEHFQIDFDALEERI-NAHT-RGVIINSPNNPSGTVYSEETIKKLSDL 200

Query: 193 CKAAGS------WLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYI 242
            +          +++ D  Y   +YDG K   V    D+ +  +S+SK+  + G R+GY+
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYV 260

Query: 243 AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 298
             P EV      +A      +    +CA  + Q + +          T  +     NR++
Sbjct: 261 LVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG-----ATGDINAYKENRDL 315

Query: 299 IREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 358
           + E L+ +G    K  +GA Y++ +  E   D             V+++     GC G +
Sbjct: 316 LYEGLTRIGYHCFK-PDGAFYMFVKALE--DDSNAFCEKAK-EEDVLIVAADGFGCPGWV 371

Query: 359 RISFGGLVEDDCKAAADRLRRGLEELVK 386
           RIS+  +  +  K +     +  ++  K
Sbjct: 372 RISY-CVDREMIKHSMPAFEKIYKKYNK 398

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  184 bits (469), Expect = 2e-54
 Identities = 86/390 (22%), Positives = 160/390 (41%), Gaps = 34/390 (8%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
                R  ++ + L+ G      P   +EK+  +        Y    G+P LR A+    
Sbjct: 29  KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWY 88

Query: 82  NQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                +    +S  +VT G+ +   +++L   D GD++++  P Y        + G    
Sbjct: 89  RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVR 148

Query: 139 LVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAA 196
            V P         + +   +  E+ P P+++ ++  P NP+   +     +R+  L K  
Sbjct: 149 SV-PLVPGIDFFNELERAIR--ESIPKPRMM-ILGFPSNPTAQCVELDFFERVVALAKQY 204

Query: 197 GSWLVVDNTY--FMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 249
              +V D  Y   +YDG K      V G  D  V  F+ SK+Y M GWR+G++    E+ 
Sbjct: 205 DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL- 263

Query: 250 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309
              + L +++           Q  A+ +L+   + V +  +   + R+++ + L   G  
Sbjct: 264 --VSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W 320

Query: 310 AVKGGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGG 364
            V+  + ++Y+WA++PE   HL   E  + L     V V PG   G  G   H+R +   
Sbjct: 321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYG-DDHVRFA--- 376

Query: 365 LV--EDDCKAAADRLRRGLEELVKDGMVQE 392
           L+   D  + A   ++        DG++  
Sbjct: 377 LIENRDRLRQAVRGIKAMFR---ADGLLSP 403

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  183 bits (467), Expect = 2e-54
 Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 48/406 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQP----P-------KMAMEKVKE 54
            L+ R        + ++ ++  G K+ +SL  G    +P    P       K A++K   
Sbjct: 2   ALSDRLELVSASEIRKLFDIAAGMKDVISLGIG----EPDFDTPQHIKEYAKEALDKGL- 56

Query: 55  LVWDPSISKYGADEGLPELRDALVKKLNQENKL-YK--SSVMVTAGANQAFVNIVLTLCD 111
                  + YG + GL ELR+A+ +KL ++N +     + +MV  GANQAF+  +     
Sbjct: 57  -------THYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK 109

Query: 112 AGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVS 169
            G+ V++  P +  SY     + G   + V P   +     + D L+K + T  T + + 
Sbjct: 110 DGEEVLIPTPAFV-SYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYV-TDKT-RALI 165

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG--DHV 222
           + +P NP+G  + ++ L+ I+D        ++ D  Y  F+YD  +H     ++G  +  
Sbjct: 166 INSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERT 225

Query: 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 282
           + +  FSK + M GWR+G++A PS +     +++K Q     C     Q+ A  +L+   
Sbjct: 226 ITVNGFSKTFAMTGWRLGFVAAPSWI---IERMVKFQMYNATCPVTFIQYAAAKALKDER 282

Query: 283 EW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 340
            W  V E  K+  R R+++ + L+ +G   VK  +GA Y++ R+ +  L   +    +  
Sbjct: 283 SWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLK 341

Query: 341 RHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
              V V+PG A G    G++RIS+     +  + A DR+ R L+E 
Sbjct: 342 EARVAVVPGSAFGKAGEGYVRISY-ATAYEKLEEAMDRMERVLKER 386

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  183 bits (467), Expect = 3e-54
 Identities = 80/372 (21%), Positives = 140/372 (37%), Gaps = 34/372 (9%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQEN 85
              ++L+ G           E     +   S       YG D GLP LR  L +      
Sbjct: 33  HTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF-YRG 91

Query: 86  KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS 144
            +    + ++ GA      + L+      +V +  P Y  +Y+   ++TG   I+  PC 
Sbjct: 92  FVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY-PAYLDIARLTGAKEIIALPCL 149

Query: 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204
                 +  +            ++ + +P NP+GT + +  L+ I          ++ D 
Sbjct: 150 -----QENAFFP-EFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDA 203

Query: 205 TY--FMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG-----FA 252
            Y  F+ D         +       + + SFSK  G  G R+G+   P E+         
Sbjct: 204 AYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVI 263

Query: 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
               +        ASI +Q   +  L   P+   E +     N +++R+AL   G   V 
Sbjct: 264 QDWERFLSTTFNGASIPAQEAGVAGLSILPQL--EAIHYYRENSDLLRKALLATGF-EVF 320

Query: 313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLVEDD 369
           GGE A YLW +  + ++ D ++  +    + + + PG   G  G  G +R S  G   +D
Sbjct: 321 GGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSG-SGFVRFSSLG-KRED 378

Query: 370 CKAAADRLRRGL 381
             AA +RL+   
Sbjct: 379 ILAACERLQMAP 390

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  183 bits (467), Expect = 6e-54
 Identities = 75/361 (20%), Positives = 135/361 (37%), Gaps = 42/361 (11%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKL---YKSS-VMVTAGANQAFVNIVLTLCDAGD 114
            +I+ +    GLPE R A+ K + +       +    V++  GA  A   I+  L D GD
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD 133

Query: 115 SVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLE----TKPTPKL 167
           + ++ +PYY  ++       TGV  I +  C S       +  +++  E    +    K 
Sbjct: 134 AFLVPSPYY-PAFNRDLRWRTGVQLIPI-HCESSNNFKITSKAVKEAYENAQKSNIKVKG 191

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-------- 217
           + + NP NP GT + +  LK +          LV D  Y   ++D  +   +        
Sbjct: 192 LILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQE 251

Query: 218 ------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ 271
                 +  H+V   S SK  G+ G+RVG I   S  +       K+     +       
Sbjct: 252 MTYCNKDLVHIVY--SLSKDMGLPGFRVGIIY--SFNDDVVNCARKMSSFGLVSTQTQYF 307

Query: 272 HLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK--- 327
             A+ S +   +  + E    L +  +     L  +G   +K     ++ W  L      
Sbjct: 308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLK-NNAGLFCWMDLRPLLRE 366

Query: 328 --HLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEE 383
                +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR +  
Sbjct: 367 STFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426

Query: 384 L 384
            
Sbjct: 427 E 427

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  181 bits (463), Expect = 8e-54
 Identities = 82/376 (21%), Positives = 153/376 (40%), Gaps = 31/376 (8%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
            ++        + L+ G     PP+  ++ + E + DP+   Y          +   +  
Sbjct: 17  KRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWY 76

Query: 82  NQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                +    +   +   G+ +   +++L L +  D +++    Y + + + ++  +   
Sbjct: 77  EGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTF 136

Query: 139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAG 197
           L+ P     L  D   + +        K++ ++N P NP+G        +    L +  G
Sbjct: 137 LI-PLREDGL-ADLKAVPE--GVWREAKVL-LLNYPNNPTGAVADWGYFEEALGLARKHG 191

Query: 198 SWLVVDNTY--FMYDGRKHC--CVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 251
            WL+ DN Y   +Y+G       + G  + VV LFS SK+Y + G+R+G+     E    
Sbjct: 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA--- 248

Query: 252 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311
             +L +V+  I          + + +L+T  E V    +        + EAL  +    +
Sbjct: 249 LARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGVLS--L 306

Query: 312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLV-- 366
                 +YLW RLPE  +DD E    L    GV + PG   G  G +G +RI+   LV  
Sbjct: 307 LPPRATMYLWGRLPE-GVDDLEFGLRL-VERGVALAPGRGFGPGG-KGFVRIA---LVRP 360

Query: 367 EDDCKAAADRLRRGLE 382
            ++   AA R+R  L+
Sbjct: 361 LEELLEAAKRIREALD 376

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  182 bits (464), Expect = 1e-53
 Identities = 87/397 (21%), Positives = 145/397 (36%), Gaps = 67/397 (16%)

Query: 30  KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGLPELRDALVKKLNQEN 85
             AV+L QG      P     K+ +   D +I+     Y    G   LR A+  +  +  
Sbjct: 25  IGAVNLGQGFPDEDGP----PKMLQAAQD-AIAGGVNQYPPGPGSAPLRRAIAAQRRRHF 79

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-SFQMTGVTHILVG 141
            +    ++ V+VT GA +A    VL L + G  V++  P+Y +SY     M G   + V 
Sbjct: 80  GVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTV- 137

Query: 142 PCSSKTLHPDA-----DWLEKTLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCK 194
                 L PD      D     L    TP  + + + +P NP+G  +    L  I+++  
Sbjct: 138 -----PLVPDGRGFALDADA--LRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAV 190

Query: 195 AAGSWLVVDNTY--FMYDGRKHCCV---EG--DHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
           AA   ++ D  Y   ++D  +H  +   +G  +  + + S +K +   GW++G+   P+E
Sbjct: 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAE 250

Query: 248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
           +      +   +  +        Q     +L T   WV      L   R+ +   L+ +G
Sbjct: 251 L---IAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG 307

Query: 308 EGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGH--------- 357
                   G  +L A      + D  E    L  + GV  IP  A               
Sbjct: 308 FAVHD-SYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADV 366

Query: 358 ----LRISFGGLVEDDCK------AAADRLRRGLEEL 384
               +R +F       CK       A  RL    E  
Sbjct: 367 WNHLVRFTF-------CKRDDTLDEAIRRLSVLAERP 396

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  182 bits (465), Expect = 1e-53
 Identities = 81/377 (21%), Positives = 140/377 (37%), Gaps = 44/377 (11%)

Query: 45  PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL-YKSS-VMVTAGANQ 100
           P+ A  K         ++ +    GLP  + A+V  + +   NK+ +  + +++TAGA  
Sbjct: 63  PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 122

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEK 157
           A    +  L D G++V++  PYY   +       TGV  + +  C+S          LE+
Sbjct: 123 ANETFIFCLADPGEAVLIPTPYY-PGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEE 180

Query: 158 TLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG 211
             +         K V V NP NP GT +    L  +    +  G  L+ D  Y    +  
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240

Query: 212 RKHCCV------------EGD----HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 255
                V                   HVV   S SK  G+ G+RVG I   S  +      
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVY--SLSKDLGLPGFRVGAIY--SNDDMVVAAA 296

Query: 256 LKVQDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGG 314
            K+     + +       A+ S +   +  + E  K L + ++ +   L   G   +  G
Sbjct: 297 TKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN-G 355

Query: 315 EGAIYLWARLPE-----KHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVE 367
              ++ W  +           + E+ + + +   + + PG +C C   G  R+ F  L E
Sbjct: 356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPE 415

Query: 368 DDCKAAADRLRRGLEEL 384
                A  RL+  + E 
Sbjct: 416 RTLDLAMQRLKAFVGEY 432

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  179 bits (457), Expect = 1e-52
 Identities = 73/352 (20%), Positives = 135/352 (38%), Gaps = 30/352 (8%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQ 100
            P+  ++  ++ +  P   KYGA  G    + A+V    ++  +    +  V +  G   
Sbjct: 61  TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN 120

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
             V +   + + GD V++  P Y   Y++   +     + +         PD   ++   
Sbjct: 121 GLVAVPTCVINPGDYVLLPDPGYT-DYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDS-- 176

Query: 160 ETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC- 215
           +     KL+  +  P NP+G+   + +        K   + +V D  Y  F +D +    
Sbjct: 177 QIIDKTKLI-YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSI 235

Query: 216 -CVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 272
              E   D  + ++S SK Y M G+RVG+     ++      L K Q +         Q 
Sbjct: 236 LASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDM---IQALKKYQTHTNAGMFGALQD 292

Query: 273 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332
            A+Y+L    +++ E+       R+     L+          +G IY+W   P    D  
Sbjct: 293 AAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPFVHAKGGIYVWLETPP-GYDSE 350

Query: 333 EVVRWLAHRHGVVVIPG---GACGCRGHLRISFGGLV--EDDCKAAADRLRR 379
           +  ++L     ++V PG   G  G   ++RIS   L   +     AA RL  
Sbjct: 351 QFEQFLVQEKSILVAPGKPFGENG-NRYVRIS---LALDDQKLDEAAIRLTE 398

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  177 bits (452), Expect = 3e-52
 Identities = 96/398 (24%), Positives = 154/398 (38%), Gaps = 47/398 (11%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           +L  R    +  I  ++  L +    AV+L QG     PP   +E V+  +      +Y 
Sbjct: 2   RLHPRTEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGRQD--QYA 58

Query: 66  ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
              GLP LR+AL ++   E +    SV+VT+GA +A   ++ +L   GD VV+  P++ +
Sbjct: 59  PPAGLPALREALAEEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFF-D 113

Query: 126 SYMSF-QMTGVTHILVG-PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            Y+    + G    LV    + +    D   LEK L   P  + + +  P NP+G    E
Sbjct: 114 VYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGE 171

Query: 184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRV 239
           R L+ I+ L +A   +L+ D  Y    Y  R     E   +    + S  K     G+RV
Sbjct: 172 RELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRV 231

Query: 240 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNRE 297
           G+I  P E      +L  ++      A    Q     +L+      +     +   R R+
Sbjct: 232 GWIVGPKEF---MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRD 288

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-----GAC 352
           ++   L  +G       EG  +L A LP            L     V +IP         
Sbjct: 289 LLAGGLRAMGLRVYV-PEGTYFLMAELPG------WDAFRLVEEARVALIPASAFYLEDP 341

Query: 353 GCRGHLRISFGGLVEDDCK------AAADRLRRGLEEL 384
             +   R +F       CK       A +RL R +   
Sbjct: 342 P-KDLFRFAF-------CKTEEELHLALERLGRVVNSP 371

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  178 bits (454), Expect = 5e-52
 Identities = 67/367 (18%), Positives = 135/367 (36%), Gaps = 40/367 (10%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQA 101
                  + +K+ +     + Y    G    R+ +    +      ++  V++T+G +QA
Sbjct: 71  PTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQA 130

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADW---LEK 157
               +  L + G ++++  P +   Y +  +  G+   L        L P+  W   L++
Sbjct: 131 IDLCLAVLANPGQNILVPRPGFS-LYKTLAESMGIEVKLY------NLLPEKSWEIDLKQ 183

Query: 158 TLETKPTP--KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK 213
            LE         + V NP NP G+   +R L++I  +       ++ D  Y   ++   K
Sbjct: 184 -LEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK 242

Query: 214 HCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---LKVQDNIPICA 266
           +  +        +++    +K + + GWR+G+I      + F  ++   L       +  
Sbjct: 243 YEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGP 302

Query: 267 SIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAIYL 320
             I Q      L   P E+    +  L  N ++   AL+     A+ G       GA+YL
Sbjct: 303 CTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALA-----AIPGLRPVRPSGAMYL 357

Query: 321 WARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 376
              +  +H     +D E    L     V  +P         +R+    + E     A  R
Sbjct: 358 MVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI-TVPEVMMLEACSR 416

Query: 377 LRRGLEE 383
           ++   E+
Sbjct: 417 IQEFCEQ 423

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  177 bits (450), Expect = 1e-51
 Identities = 86/429 (20%), Positives = 154/429 (35%), Gaps = 63/429 (14%)

Query: 1   MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV--WD 58
           M +   L KR   +   + V+  +L       ++L QG   +  PK A+  +       D
Sbjct: 9   MHNKFDLPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPD 67

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDS 115
           P  ++Y    G P L  AL K  +Q         + V+VT GA +A    +    D GD 
Sbjct: 68  PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDE 127

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILV--GPCSSKTLHPDADWL--EKTLETKPTP--KLV 168
           V++  P++ + Y    +  G     +   P  +      ADW+     LE       K++
Sbjct: 128 VIIIEPFF-DCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMI 186

Query: 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---EG--DH 221
            +  P NP G  +    L+ +++LCK      V D  Y   +++  +H  +    G  + 
Sbjct: 187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246

Query: 222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH-------LA 274
            + + S  K + + GW++G+   P  +      L  V  N     +   Q          
Sbjct: 247 TITIGSAGKTFSLTGWKIGWAYGPEAL---LKNLQMVHQNCVYTCATPIQEAIAVGFETE 303

Query: 275 LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---------- 324
           L  L++   +      +L+  R+ +   L+ +G       +G  ++ A            
Sbjct: 304 LKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTV-PQGGYFMVADWSSLDSKVDLT 362

Query: 325 -PEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFGGLVEDDCK----- 371
                  D+   +W+    G+  IP  A             +R  F        K     
Sbjct: 363 QETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCF-------FKKDENL 415

Query: 372 -AAADRLRR 379
             AA+ LR+
Sbjct: 416 QKAAEILRK 424

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  175 bits (447), Expect = 2e-51
 Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 26/339 (7%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           ++YG   G P LR+A+ +KL ++N L Y +  ++VT G  Q+  N++L + + GD V++ 
Sbjct: 61  TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIP 120

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTP--KLVSVVNPG 174
           AP++  SY  M  ++   T +++ P + +T      + + + +    TP  KL+    P 
Sbjct: 121 APFWV-SYPEM-VKLAEGTPVIL-PTTVETQFKVSPEQIRQAI----TPKTKLLVFNTPS 173

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLF 226
           NP+G       ++ I+ +   AG W++ D  Y   +YD  +H  +        +  V   
Sbjct: 174 NPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCS 233

Query: 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 286
            F+K Y M GWRVG++A P  +        K+Q +        +Q+ A+ + +   + V 
Sbjct: 234 GFAKTYAMTGWRVGFLAGPVPL---VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQ 290

Query: 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346
           E +      R  + +AL+ +        +GA Y++  + +      +    L  +H V  
Sbjct: 291 EMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVAT 350

Query: 347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385
           +PG A G    +R+S+     D  K   +RL + L  ++
Sbjct: 351 VPGAAFGADDCIRLSY-ATDLDTIKRGMERLEKFLHGIL 388

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  175 bits (445), Expect = 5e-51
 Identities = 82/420 (19%), Positives = 153/420 (36%), Gaps = 61/420 (14%)

Query: 8   AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
           AKR    +  + V+  +L     + V+L QG     PP    E++ +  +  ++++Y   
Sbjct: 2   AKRIEGLDSNVWVEFTKLAA-DPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60

Query: 68  EGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
            G P L  AL     +  +        ++V  GA  +  N +  L D GD V++  P+Y 
Sbjct: 61  FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY- 119

Query: 125 NSYMSF-QMTGVTHILV---GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVNPGNP 176
           + Y    +M G   + +      +       +DW    + LE+K +   K + +  P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179

Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNLFSFS 229
            G     + L+ I+DLC    +  + D  Y   +Y G  H  +       +  + + S  
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239

Query: 230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-------P 282
           K + + GW++G+   P+ +      L  VQ N     +   Q     +            
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296

Query: 283 EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL----------PEKHLDDF 332
            +     K+L   R+ +   L+ +G   +   +G  ++ A +                D+
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIV-PDGGYFIIADVSSLGADLSDMNSDEPYDY 355

Query: 333 EVVRWLAHRHGVVVIPGGACGCRGH-------LRISFGGLVEDDCK------AAADRLRR 379
           + V+W+     +  IP  A             +R  F        K      AA +  R 
Sbjct: 356 KFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCF-------IKKDSTLDAAEEIFRA 408

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  175 bits (446), Expect = 7e-51
 Identities = 89/408 (21%), Positives = 153/408 (37%), Gaps = 38/408 (9%)

Query: 4   YAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK 63
            +KL    L  E+        L       +SL  G      P++    + +   + S  +
Sbjct: 30  MSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIE 89

Query: 64  ----YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
               YGA++G   LR A+ K       +    V V+ GA      +   +  +  ++ + 
Sbjct: 90  GYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQ 148

Query: 120 APYYFNSYM-SFQMTGVTHILVGPCSSKT------LHPDADWLEKTLETKPTPKLVSVVN 172
            P Y  +Y+ S  + G T                   P+  +    L T     ++   +
Sbjct: 149 DPSY-PAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LSTVGRTDIIFFCS 206

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEG--DHVVNLF 226
           P NP+G       L ++ +  K  GS +V D+ Y  +M D        + G  +  +   
Sbjct: 207 PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETA 266

Query: 227 SFSKAYGMMGWRVGYIAYPSEV-----EGFATQLLKVQDNIPICASIISQH--LALYSLQ 279
           SFS   G  G R+G+   P ++        A    ++       AS ISQ   LA  + +
Sbjct: 267 SFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE 326

Query: 280 TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 339
            G E + + +     N  II +  + LG   V GG+ A Y+W   P      ++V   + 
Sbjct: 327 -GLEAMHKVIGFYKENTNIIIDTFTSLGY-DVYGGKNAPYVWVHFPN--QSSWDVFAEIL 382

Query: 340 HRHGVVVIPG---GACGCRGHLRIS-FGGLVEDDCKAAADRLRRGLEE 383
            +  VV  PG   G  G  G +R+S FG    ++   A  R ++  + 
Sbjct: 383 EKTHVVTTPGSGFGPGG-EGFVRVSAFGH--RENILEACRRFKQLYKH 427

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  173 bits (442), Expect = 8e-51
 Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 66/406 (16%)

Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQP----PKMAMEKVKELVWD 58
           L+KR L  E    M I+   Q+L    K  + L  G    +P    PK  +++  +    
Sbjct: 2   LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIG----EPDFNTPKPIVDEGIK---- 53

Query: 59  PSI----SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDA 112
            S+    + Y    G+ ELR+ + +    + K       +++T G++      + ++ D 
Sbjct: 54  -SLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDD 112

Query: 113 GDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP--KLVS 169
           GD V++  P Y   Y +F +  G   +            ++      LE   +   K + 
Sbjct: 113 GDEVLIQNPCYP-CYKNFIRFLGAKPVFC------DFTVES------LEEALSDKTKAII 159

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG--DHV 222
           + +P NP G  I     + I +       +++ D  Y   +Y+G K       +   +  
Sbjct: 160 INSPSNPLGEVID----REIYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKT 214

Query: 223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP 282
           + +  FSK Y M GWR+GY+    E+      +LK+Q N+ I A  ISQ+ AL +     
Sbjct: 215 ILINGFSKLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAF-EKE 270

Query: 283 EW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 340
               +   +K+  R R ++ + +   G        GA Y++  + E   D  E    L  
Sbjct: 271 TEREINSMIKEFDRRRRLVLKYVKDFGWEVNN-PIGAYYVFPNIGE---DGREFAYKLLK 326

Query: 341 RHGVVVIPG---GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383
              V + PG   G+ G + ++RIS+     ++ K   +R++  L +
Sbjct: 327 EKFVALTPGIGFGSKG-KNYIRISY-ANSYENIKEGLERIKEFLNK 370

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  175 bits (446), Expect = 1e-50
 Identities = 80/395 (20%), Positives = 142/395 (35%), Gaps = 41/395 (10%)

Query: 21  QIQELVRGAKNA------VSLAQGVVYWQPPKMAMEKVKELVWDPSISK----YGADEGL 70
           +I    +  +        +SL  G      PK   + + +     +  +    YGA++G 
Sbjct: 54  EIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQ 113

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
             LR+A+              + ++ G+      I +    +  +V +  P Y     + 
Sbjct: 114 GALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMF-GSKPTVAVQDPSYPVYVDTS 172

Query: 131 QMTGVTHILVGPCSSK----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
            M G+T    G           +PD  +    L       ++   +P NP+G       L
Sbjct: 173 VMMGMTGDHNGTGFDGIEYMVCNPDNHFFP-DLSKAKRTDIIFFCSPNNPTGAAATRAQL 231

Query: 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG--DHVVNLFSFSKAYGMMGWRV 239
             + +  +  GS LV D  Y  ++ +         + G  +  +   SFSK  G  G R+
Sbjct: 232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRL 291

Query: 240 GYIAYPSEV-----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLV 293
           G+   P  +     E       +V       AS I Q   L  LQ  G + +   +K   
Sbjct: 292 GWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYK 351

Query: 294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---G 350
            N +I++   + +G  +V GG+ A Y+W   P K    ++V   +  R  +V  PG   G
Sbjct: 352 ENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--PSWDVFAEILERCNIVTTPGSGYG 408

Query: 351 ACGCRGHLRISFGGLV--EDDCKAAADRLRRGLEE 383
             G  G +R S        ++   A  R +    +
Sbjct: 409 PAG-EGFVRAS---AFGSRENILEAVRRFKEAYGK 439

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  173 bits (440), Expect = 4e-50
 Identities = 87/431 (20%), Positives = 150/431 (34%), Gaps = 65/431 (15%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKE-LVWDPSISKY 64
             A+R    +    V+  +L     + V+L QG   + PP  A+E  +  +  D  +++Y
Sbjct: 5   LQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY 63

Query: 65  GADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
               G P L   L     +          +V+VT G   A       L D GD V++  P
Sbjct: 64  TKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEP 123

Query: 122 YYFNSYMSF-QMTGVTHILV----GPCSSKTLHPDADWL--EKTLETKPTP--KLVSVVN 172
           ++ + Y     M G   + V    GP  +  L   ++W      L  K T   K + +  
Sbjct: 124 FF-DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNT 182

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-----DHVVNL 225
           P NP G       L+ ++ LC+      + D  Y   +YDG +H  +       +  + +
Sbjct: 183 PNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTI 242

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ------ 279
            S  K +   GW+VG++  P  +      L  V  N        SQ     S +      
Sbjct: 243 GSAGKTFSATGWKVGWVLGPDHI---MKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLF 299

Query: 280 -TGPEWVTERVKDLVRNREIIREALSPLG------EGA------VKGGEGAIYLWARLPE 326
                +  +  + + R R+ +  +L  +G      +G+      +               
Sbjct: 300 RQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDIS-DFKRKMPDLPGAV 358

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGA-------CGCRGHLRISFGGLVEDDCK------AA 373
               D   V+W+    G+V IP               ++R  F        K      A 
Sbjct: 359 DEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCF-------VKDEATLQAM 411

Query: 374 ADRLRRGLEEL 384
            ++LR+   EL
Sbjct: 412 DEKLRKWKVEL 422

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  172 bits (439), Expect = 9e-50
 Identities = 68/432 (15%), Positives = 139/432 (32%), Gaps = 70/432 (16%)

Query: 18  IMVQIQELVRGAKNAVSLAQGV--VYWQPPKMAMEKVKELVWDP-----------SISKY 64
           +M  + + ++  +    L  G         ++ +E  K L  D            S++ Y
Sbjct: 20  LMDDLGDALKSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANY 79

Query: 65  GADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDA---------- 112
              +G     DALV   N+      +S  + +T G+  AF  +      A          
Sbjct: 80  SNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKE 139

Query: 113 -----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC----------SSKTLHPDADWLEK 157
                   ++   P Y   Y    + G     V P                  D + LE 
Sbjct: 140 SKSVDKSILLPLTPEYI-GYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALEN 198

Query: 158 TLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHC 215
                +     +    P NP+G  + +  +  ++++ K     L++DN Y   +    + 
Sbjct: 199 LPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYS 258

Query: 216 CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 272
                  ++ +  FS SK  G+ G R G I   ++V      +  +   + +  +     
Sbjct: 259 DAHLNWDNNTILCFSLSK-IGLPGMRTGIIVADAKV---IEAVSAMNAVVNLAPTRFGAA 314

Query: 273 LALYSLQTG--PEWVTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLP 325
           +A   +      +     +K   + +     +++++AL        K  EGAI+LW    
Sbjct: 315 IATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHK-PEGAIFLWLWFK 373

Query: 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFGGLVEDDCKAAAD 375
           +  +   ++   L    G +++P                   +R+S     E        
Sbjct: 374 DLPISTLDLYERLK-AKGTLIVPSEYFFPGVDVSDYQHAHECIRMSI-AADEQTLIDGIK 431

Query: 376 RLRRGLEELVKD 387
            +   + EL  +
Sbjct: 432 VIGEVVRELYDN 443

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  170 bits (433), Expect = 2e-49
 Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 31/338 (9%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+AL +K  +EN L       +VT G +QA  N+   + D GD V++ 
Sbjct: 62  TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL 121

Query: 120 APYYFNSY--MSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTP--KLVSVVN 172
           +PY+  SY  M  +  G   + V     +      P+       +    TP  K + V +
Sbjct: 122 SPYWV-SYPEM-VRFAGGVVVEV-ETLPEEGFVPDPER------VRRAITPRTKALVVNS 172

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSF 228
           P NP+G   P+ +L+ ++ L      +LV D  Y   +Y+G       V  +H + +   
Sbjct: 173 PNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGA 232

Query: 229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL---QTGPEWV 285
           +KA+ M GWR+GY   P EV      +  V          I+Q   L +L   +    +V
Sbjct: 233 AKAFAMTGWRIGYACGPKEV---IKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFV 289

Query: 286 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 345
               +   R R+++ E L+ LG  AV+   GA Y+         D+      L    GV 
Sbjct: 290 EMAREAYRRRRDLLLEGLTALGLKAVR-PSGAFYVLMDTSPIAPDEVRAAERLLE-AGVA 347

Query: 346 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 383
           V+PG      GH+R+S+    E++ + A +R  R L  
Sbjct: 348 VVPGTDFAAFGHVRLSY-ATSEENLRKALERFARVLGR 384

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  169 bits (430), Expect = 1e-48
 Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 21/341 (6%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           + YG  EGLPELR A+V++  ++N +      V VTA   +A   I   L D GD +++ 
Sbjct: 72  NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVP 131

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
            P Y   Y    +  G   +       +    PD D + K + T  T K ++V+NP NP+
Sbjct: 132 GPSYP-PYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRKKI-TDRT-KAIAVINPNNPT 187

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKA 231
           G    ++ L+ I ++       ++ D  Y    Y+G +H       +   V+ +   SK 
Sbjct: 188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKV 246

Query: 232 YGMMGWRVGYIAY--PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 289
           Y   GWR+GY+ +  P        + +     I +C +  +Q  A+  L    +++ E +
Sbjct: 247 YFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYM 306

Query: 290 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL-DDFEVVRWLAHRHGVVVIP 348
           K L   R+ I + L+ +   +    +GA Y++ ++      +D E V  + H   V+ + 
Sbjct: 307 KKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVH 366

Query: 349 GGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
           G   G    GH R  F   +E   + A DR  + ++E +K+
Sbjct: 367 GSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  168 bits (429), Expect = 2e-48
 Identities = 76/419 (18%), Positives = 145/419 (34%), Gaps = 56/419 (13%)

Query: 6   KLAKRALETEMPI--MVQIQELVRGAKNAVSLAQG----VVYWQPPKMAMEKVKELVWDP 59
            ++  A     PI  +    +     K  + L+ G              ++K+KE +   
Sbjct: 7   SMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ 66

Query: 60  SISKYGADEGLPELRDALVKKLNQENKLYKSS--------VMVTAGANQAFVNIVLTLCD 111
             + Y    G PE R+A+           +          V++ +G +   +  +  +CD
Sbjct: 67  ECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD 126

Query: 112 AGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADW---LEKTLETKPTP-- 165
           AGD  ++  P +   Y +  +  G+              P+ DW   L++ +        
Sbjct: 127 AGDYALVPQPGFP-HYETVCKAYGIGMHFY------NCRPENDWEADLDE-IRRLKDDKT 178

Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR----KHCCV-- 217
           KL+ V NP NP G+    + ++ I  L +     L  D  Y   ++ G+        V  
Sbjct: 179 KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238

Query: 218 --EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLLKVQDNIPICASIISQHL 273
                  V L   +K   + GWR+G++ Y        +  + LK    +      + Q  
Sbjct: 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAA 298

Query: 274 ALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEGAIYLWARLPEK 327
              +L   P E + + V  +  +   +   +         G       GA+YL +R+  +
Sbjct: 299 LGEALLNTPQEHLDQIVAKIEESAMYLYNHIG-----ECIGLAPTMPRGAMYLMSRIDLE 353

Query: 328 HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382
                  D E    L     V V+PG      G  R++      +  + A +R++   +
Sbjct: 354 KYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAFCQ 411

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  164 bits (418), Expect = 3e-47
 Identities = 89/336 (26%), Positives = 145/336 (43%), Gaps = 35/336 (10%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
            KY    G+ ELR+ + K++ +  K       V+VT GA QA  N  + L D GD V++F
Sbjct: 72  VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVF 131

Query: 120 APYYFNSYMSF-QMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTP--KLVSVVNP 173
           +P +  SY+    + G T  +V             +       +E       K V + +P
Sbjct: 132 SPVWV-SYIPQIILAGGTVNVV-ETFMSKNFQPSLEE------VEGLLVGKTKAVLINSP 183

Query: 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEG--DHVVNLF 226
            NP+G       L+ +  L K    +++ D  Y   +Y   +      V    D +V + 
Sbjct: 184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYIN 242

Query: 227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 286
            FSK++ M GWRVGY+    +V   AT + K+Q +   C + ++Q+ AL +L       +
Sbjct: 243 GFSKSHSMTGWRVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKAL-EVD--NS 296

Query: 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346
             V+     +  + E L  +G   V+  EGA YL+    +   DD +    L     V +
Sbjct: 297 YMVQTFKERKNFVVERLKKMGVKFVE-PEGAFYLF---FKVRGDDVKFCERLLEEKKVAL 352

Query: 347 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382
           +PG A    G +R+SF     +    A DR+   L 
Sbjct: 353 VPGSAFLKPGFVRLSF-ATSIERLTEALDRIEDFLN 387

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  165 bits (420), Expect = 4e-47
 Identities = 56/365 (15%), Positives = 106/365 (29%), Gaps = 47/365 (12%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKL-YKSS-VMVTAGANQA----FVNIVLTLCDAGDS 115
           S Y   +GLPEL+    +       +   +   + T G+ Q     F+    T  +    
Sbjct: 76  SIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYG 135

Query: 116 VVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
            +   P + N      ++ G           +            L+T      +   NP 
Sbjct: 136 TLFIDPGF-NLNKLQCRILGQKFESFDLFEYRGEKLREKLESY-LQTGQF-CSIIYSNPN 192

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG----------DHV 222
           NP+   + +  L+ I +L       ++ D  Y    +        E           D+ 
Sbjct: 193 NPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNY 252

Query: 223 VNLFSFSKAYGMMGWRVGYIAYPSEV--------------EGFATQLLKV-QDNIPICAS 267
           +   S SKA+   G R+G +    ++                F   L       +   A+
Sbjct: 253 ILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGAT 312

Query: 268 IISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIY 319
             +Q      L +   G     + V +  R   I+++     G   V            +
Sbjct: 313 HSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGF 372

Query: 320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG-HLRISFGGLVEDDCKAAADRLR 378
            +  +  K +D  +++          +        R   +RI    L E        RL+
Sbjct: 373 YFT-VGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQ 431

Query: 379 RGLEE 383
               E
Sbjct: 432 MLNAE 436

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  162 bits (412), Expect = 6e-46
 Identities = 71/419 (16%), Positives = 154/419 (36%), Gaps = 49/419 (11%)

Query: 4   YAKLAKRALETEMP--IMVQIQELVRGAKNAVSLAQGVVYWQPPKM---AMEKVKELVWD 58
           +A L+        P  I+ Q  E         +   G+   +  KM   +++ +   +  
Sbjct: 22  FAMLSDLGQNMFYPKGILSQSAE---AKSTTYNATIGMATNKDGKMFASSLDAMFNDLTP 78

Query: 59  PSISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGD 114
             I  Y   +G+ ELRD   +K+ ++N        S  +VT         +     +  D
Sbjct: 79  DEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDD 138

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-P 173
           ++++    + N  + F      ++   P   K  H   D L + L++    K++ ++N P
Sbjct: 139 TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYP 198

Query: 174 GNPSGTYIPERL-LKRISDLCKAAGS-----WLVVDNTY--FMYDGRKHCCV-------- 217
            NP+G Y P    +  I +  KA  +       VVD+ Y    Y+      +        
Sbjct: 199 NNPTG-YTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLH 257

Query: 218 -EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQ 271
                 + L   +K +   G+RVG++ + +  +     L       ++ NI     + +Q
Sbjct: 258 SNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNI-SSGPLPTQ 316

Query: 272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG------EGAIYLWARLP 325
               + L+   ++  E  +++   +E        +                  ++  ++ 
Sbjct: 317 SAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKV- 375

Query: 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
              +D   + + L  ++ + VI   A      +RI+F  + +DD     D + + +++L
Sbjct: 376 -HDVDPEALRKHLIDKYSIGVIALNATD----IRIAFSCVEKDDIPHVFDSIAKAIDDL 429

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  162 bits (411), Expect = 6e-46
 Identities = 68/359 (18%), Positives = 115/359 (32%), Gaps = 46/359 (12%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDS------ 115
           Y   +G   L +AL   L +          + +T G+  AF  +                
Sbjct: 71  YDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKV 130

Query: 116 VVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
           +   AP Y            F        L+ P      H D +     L       ++ 
Sbjct: 131 LFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFE----HLHIGEETGMIC 185

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEG---DHVVNL 225
           V  P NP+G  I +  L ++  L       LV+DN Y   + G            +++  
Sbjct: 186 VSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILC 245

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW- 284
            S SK  G+ G R G I    +     T +  +   I +    +   +    ++      
Sbjct: 246 MSLSK-LGLPGSRCGIIIANDKT---ITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLR 301

Query: 285 -VTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 338
                +K     R      IIR  LS       K  EGAI+LW    +  +    + + L
Sbjct: 302 LSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHK-PEGAIFLWLWFKDLPITTELLYQRL 360

Query: 339 AHRHGVVVIPGGA---------CGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG 388
               GV+++PG                 +R+++     D  +A    L   +E   ++G
Sbjct: 361 K-ARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERAWREG 417

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  146 bits (371), Expect = 2e-39
 Identities = 72/396 (18%), Positives = 135/396 (34%), Gaps = 76/396 (19%)

Query: 64  YGADEGLPELRDALV-KKLNQENKL-----YKSSVMVTAGANQAFVNIVLTL-----CDA 112
           Y     +  + + +V + + +E           ++    G   A   I  +L       A
Sbjct: 134 YPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKA 193

Query: 113 GDSVVMFAPYYFNSYMSF-QMTGVTHILVG-PCSSKT-LHPDADWLEKTLETKPTPKLVS 169
           GD V +  P  F  Y+   ++       V                L+K L+     K+  
Sbjct: 194 GDKVAIGMPV-FTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDK-LKDPAI-KIFF 250

Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTY--FMYDGRKHCCVEGDHVVNL 225
            VNP NP    + +R L+R+ ++         ++ D+ Y  F  D +    +  ++ + +
Sbjct: 251 CVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLV 310

Query: 226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-------------------- 265
           +SFSK +G  GWR+G +A   +   F   L K+Q++  +                     
Sbjct: 311 YSFSKYFGATGWRLGVVAAHQQNV-FDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDR 369

Query: 266 ---------------ASIISQH----LALYSLQTGPEWVTERVKDLVRNREIIREAL--- 303
                           S   Q      +L++L    +     +K L+R RE         
Sbjct: 370 LVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGM 429

Query: 304 ---SPLGEGA------VKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 352
                           ++     +Y   ++    K     +++  +A   G+V++PG   
Sbjct: 430 PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGF 489

Query: 353 G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
           G  R   R S   L E +  A    LR+  +EL  +
Sbjct: 490 GSNRPSGRASLANLNEYEYAAIGRALRKMADELYAE 525

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  142 bits (360), Expect = 1e-38
 Identities = 94/397 (23%), Positives = 164/397 (41%), Gaps = 44/397 (11%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQP-----PKMAMEKVKELVW--DPSISKYGADEGL 70
           +M +  EL +     +SLA G     P     P+  + ++ + V   +P    Y    G+
Sbjct: 22  VMKKASELQKKGVKLISLAAGD----PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGI 77

Query: 71  PELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM 128
           PELR+ L   L + + L     ++++T G   A   +   L D GD V+   P Y N+ +
Sbjct: 78  PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL 137

Query: 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT----PKLVSVV-NPGNPSG-TYIP 182
           +F+  G     V P  +  +  D   LE+ ++         KL+  +    NP G T   
Sbjct: 138 AFEQLGAKIEGV-PVDNDGMRVDL--LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSM 194

Query: 183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-----KHCCVEGDHVVNLFSFSKAYGMM 235
           ER  K + ++       ++ D  Y    Y+G      K    EG  V+   + SK     
Sbjct: 195 ER-RKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSK-VLGT 251

Query: 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLV 293
           G+R+G+I    E+     ++L  +  I  CA  ISQ++AL  L+ G   ++  E      
Sbjct: 252 GFRIGWIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGY 308

Query: 294 RNR-EIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA 351
           + + +I+ +AL   L           +++   LPE   D       L  R GVVV+PG  
Sbjct: 309 KEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPE-GADGISFANELMEREGVVVVPGKP 367

Query: 352 C----GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
                  +  +R++F    +++      +L +  +E 
Sbjct: 368 FYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  142 bits (359), Expect = 1e-38
 Identities = 52/361 (14%), Positives = 95/361 (26%), Gaps = 69/361 (19%)

Query: 65  GADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTL--------CDAGD 114
            ++    EL   + +              ++   G  Q    +V++L             
Sbjct: 97  VSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPES 156

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174
            VV  AP+Y   +        T              +A          P   +  V +P 
Sbjct: 157 KVVAHAPFYP-VFRE-----QTKYFDKK--GYVWAGNAANYVNVS--NPEQYIEMVTSPN 206

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEG--DHVVNLFSFSKAY 232
           NP G  +   ++K         G   + D    +Y    +  ++   D  + LF+ SK  
Sbjct: 207 NPEGL-LRHAVIK---------GCKSIYD---MVYYWPHYTPIKYKADEDILLFTMSKFT 253

Query: 233 GMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 291
           G  G R G+ +     V      LL             +Q  +L  L+     V  +   
Sbjct: 254 GHSGSRFGWALIKDESV---YNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGT 310

Query: 292 -----------LVRNREIIREALSPLGEGAVKGGEGAIYL--------------WARLPE 326
                      L      I   L      + +    + Y               W +   
Sbjct: 311 MRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW 370

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELV 385
           +   D            +    G        ++R+S     +DD       L+  ++   
Sbjct: 371 EEDKDCY---QTFQNGRINTQNGVGFEASSRYVRLSLIKT-QDDFDQLMYYLKDMVKAKR 426

Query: 386 K 386
           K
Sbjct: 427 K 427

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  141 bits (356), Expect = 2e-38
 Identities = 69/336 (20%), Positives = 112/336 (33%), Gaps = 51/336 (15%)

Query: 71  PELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGD----SVVMFAPYYF 124
           PEL DA+                ++V  G+ Q     V  L         SVV  AP+Y 
Sbjct: 71  PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFY- 129

Query: 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184
           ++Y        T  +           DA         K  P +  V +P NP GT     
Sbjct: 130 STY-----VEETTYVRSG--MYKWEGDAW-----GFDKKGPYIELVTSPNNPDGT----- 172

Query: 185 LLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IA 243
           + + + +      + ++ D  Y+ +          DH + LF+FSK  G  G R+G+ + 
Sbjct: 173 IRETVVNRPDDDEAKVIHDFAYY-WPHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALV 231

Query: 244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ----------TGPEWVTERVKDLV 293
              EV   A ++++      I  S  SQ      L               +     + + 
Sbjct: 232 KDKEV---AKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMK 288

Query: 294 RNREIIREALSPLGEGAV--KGGEGAIYLWARLPE-------KHLDDFEVVRWLAHRHGV 344
              E +RE +       +         Y    L            ++ ++V  L  RH V
Sbjct: 289 NRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELR-RHKV 347

Query: 345 VVIPGGACG-CRGHLRISFGGLVEDDCKAAADRLRR 379
           +   G  CG  + H+R+S     ED      +RL  
Sbjct: 348 MSRAGERCGSDKKHVRVSMLSR-EDVFNVFLERLAN 382

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  142 bits (360), Expect = 6e-38
 Identities = 64/402 (15%), Positives = 125/402 (31%), Gaps = 85/402 (21%)

Query: 64  YGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGANQAFVNIVLTLC-----DAG 113
              D  L      +   L + +        ++ +  T G   A V    +L        G
Sbjct: 134 PVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKG 193

Query: 114 DSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWL--EKTLETKPTP--KLV 168
           D + +  P  F  Y+   ++     + V    S       DW      +E    P  K +
Sbjct: 194 DKIAINEPI-FTPYLRIPELKDYELVEV-DLHSY---EKNDWEIEPNEIEKLKDPSIKAL 248

Query: 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTY--FMYDGRKHCCVEGDHVVNL 225
            VVNP NP+        L  I    +     +++ D  Y  F+ + +    V   + + +
Sbjct: 249 IVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLV 308

Query: 226 FSFSKAYGMMGWRVGYIAYPSE-------------------------------------- 247
           +S+SK +G  GWR+G IA   +                                      
Sbjct: 309 YSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRL 368

Query: 248 ------VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301
                 +  + T  L     I      ++  L   +  +   ++    K +    + + +
Sbjct: 369 CADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHD 428

Query: 302 ALSPLGEGAVKGGEGAIYLWARLPE---------------KHLDDFEVVRWLAHRHGVVV 346
           A+    +          Y    +                  + +  + +  LA ++GVV+
Sbjct: 429 AMQAPKDETDT--NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVL 486

Query: 347 IPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
           + G   G   G LR+S   L  +D      ++   L+E  ++
Sbjct: 487 VDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  138 bits (349), Expect = 3e-37
 Identities = 54/363 (14%), Positives = 115/363 (31%), Gaps = 48/363 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQA 101
            PK   + +K      +   Y        LR A      +    +L ++ ++ T G+ + 
Sbjct: 37  TPKFIQDALKNHTHSLN--IYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREV 94

Query: 102 FVNIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK-T 158
             N    +       ++    P+Y     + +      +L+       L  + D+     
Sbjct: 95  LFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM------PLTKENDFTPSLN 148

Query: 159 LETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKH-- 214
            +      LV ++N P NP+G  +    L     L       L+ D  Y  +Y+      
Sbjct: 149 EKELQEVDLV-ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPS 207

Query: 215 ----CCVEGDH----VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 266
               C + G+     V+ + S SK     G R G+IA  S +     +    +  +   +
Sbjct: 208 LLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLE---KYKAFRAYLGYTS 264

Query: 267 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 326
           +   Q  +  +                 N ++ R+               + Y++  +  
Sbjct: 265 ANAIQKASEAAW-LDDRHAEFFRNIYANNLKLARKIFKN-----TLIYPYSFYVYLPVQ- 317

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDD--CKAAADRLRRG 380
              +     + L    G++ +P    G       ++R++   LV D    +   + +   
Sbjct: 318 ---NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLA---LVYDTPLLEKPLEIIETY 371

Query: 381 LEE 383
            E 
Sbjct: 372 REN 374

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  133 bits (336), Expect = 2e-35
 Identities = 91/410 (22%), Positives = 157/410 (38%), Gaps = 56/410 (13%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
              K A   +      I+EL++       +S A G+    P     PK    +    +  
Sbjct: 9   AFGKGAGRIQAST---IRELLKLTQRPGILSFAGGL----PAPELFPKEEAAEAAARILR 61

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
                  +Y   EG   LR  + + +          V++T G+ QA   +     D G  
Sbjct: 62  EKGEVALQYSPTEGYAPLRAFVAEWIGVRP----EEVLITTGSQQALDLVGKVFLDEGSP 117

Query: 116 VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPG 174
           V++ AP Y  +  +F++ G   + V P   +    DA  LE+ L+ +  P+ + ++ +  
Sbjct: 118 VLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEGPDLDA--LEEVLKRER-PRFLYLIPSFQ 173

Query: 175 NPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-----KHCCVEG--DHVVN 224
           NP+G         KR+  +    G  +V D+ Y    +             E     V+ 
Sbjct: 174 NPTGGLTPLPA-RKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIY 232

Query: 225 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 284
           L SFSK     G RV +     E      +L++ +    +   +++Q L    L+ G   
Sbjct: 233 LGSFSKVL-SPGLRVAFAVAHPEA---LQKLVQAKQGADLHTPMLNQMLVHELLKEGFSE 288

Query: 285 VTERVKDLVRNR-EIIREALSP-LGEGAV----KGGEGAIYLWARLPEKHLDDFEVVRWL 338
             ERV+ + R + + +  AL   + +       KGG   +++W  LP+  L    + R  
Sbjct: 289 RLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG---MFVWMELPK-GLSAEGLFR-R 343

Query: 339 AHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           A    V  +PGG      G    LR+S+  L  +       RL R L+ L
Sbjct: 344 ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGL 393

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  130 bits (329), Expect = 4e-34
 Identities = 91/418 (21%), Positives = 167/418 (39%), Gaps = 54/418 (12%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
           K++K     +  I   I+E+++ A  K+A+S   GV    P     P+  + ++ + + +
Sbjct: 20  KISKIGQNMKSSI---IREILKFAADKDAISFGGGV----PDPETFPRKELAEIAKEIIE 72

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYKSS---VMVTAGANQAFVNIVLTLCDA 112
                  +Y   EG P L+  ++K L +   +       ++ T G+ QA   I     D 
Sbjct: 73  KEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDD 132

Query: 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET------KPTPK 166
               V+  P Y  +  +F+      ++V P     +  +   LE+ L            K
Sbjct: 133 ESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDGMDLNV--LERKLSEFDKNGKIKQVK 189

Query: 167 LVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----E 218
            + VV N  NP+G T   E+  K + ++ +    ++V D+ Y    Y+G     +     
Sbjct: 190 FIYVVSNFHNPAGVTTSLEK-RKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG 248

Query: 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 278
            + VV L +FSK     G R+G +A   E      ++++ + +  +C+  I+  LA   L
Sbjct: 249 PERVVLLNTFSK-VLAPGLRIGMVAGSKEF---IRKIVQAKQSADLCSPAITHRLAARYL 304

Query: 279 QTGP-EWVTERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 332
           +        +   +L R +       + E  S +        EG +++W  LPE   D +
Sbjct: 305 ERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE-GFDTW 363

Query: 333 EVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           E+    A R  V  +PG            +R+SF    ++       RLR  + E  K
Sbjct: 364 EMFE-YAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  130 bits (329), Expect = 4e-34
 Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 58/417 (13%)

Query: 6   KLAKRALETEMPIMVQIQELVRGA--KNAVSLAQGVVYWQP-----PKMAMEKVKELVWD 58
             +K+ALE        ++EL++     + +SLA G+    P     PK  +  +   + +
Sbjct: 53  FFSKKALEMRASE---VRELLKLVETSDIISLAGGL----PNPKTFPKEIIRDILVEIME 105

Query: 59  ---PSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGD 114
                  +YG  +G   LR+ L+K L +   + + + +M+T+G+ QA   I     + GD
Sbjct: 106 KYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGD 165

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT----PKLVSV 170
            VV+ AP Y  +  +F      +I + P   + +  +   LE+ L+   +     K+V  
Sbjct: 166 IVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEGMKVEI--LEEKLKELKSQGKKVKVVYT 222

Query: 171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-----KHCCVEGDHV 222
           V    NP+G  + E   K + +L       +V D+ Y    Y G      K    EG  V
Sbjct: 223 VPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEG-RV 281

Query: 223 VNLFSFSK--AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 280
           + L +FSK  A G    R+G++     +     ++   + +  +C ++  Q +A   +  
Sbjct: 282 IYLGTFSKILAPGF---RIGWMVGDPGI---IRKMEIAKQSTDLCTNVFGQVVAWRYVDG 335

Query: 281 GP-EWVTERVKDLVRNR-EIIREALSP-LGEGAV----KGGEGAIYLWARLPEKHLDDFE 333
           G  E     ++   + R + + EAL   + EG      +GG   +++W  LP+  +D  +
Sbjct: 336 GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGG---MFIWVTLPD-GIDSKK 391

Query: 334 VVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           ++   A + GV  +PG A       +  +R++F  + ED       RL   ++E +K
Sbjct: 392 MLE-RAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  130 bits (328), Expect = 1e-33
 Identities = 68/397 (17%), Positives = 138/397 (34%), Gaps = 58/397 (14%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS---VMVTAGAN 99
           +  K    ++ +     S+  Y A +G+  +R+ +   + + +    +    + +T GA+
Sbjct: 104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGAS 163

Query: 100 QAFVNIVLTLCDAGD---SVVMF-APYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADW 154
                I+  L   G    + VM   P Y   Y           +            + + 
Sbjct: 164 DGISTILKILVSGGGKSRTGVMIPIPQY-PLYSAVISELDAIQVNYYLDEENCWALNVNE 222

Query: 155 LEKTLETK---PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMY 209
           L + ++       PK++ ++NPGNP+G     + ++ +         +L+ D  Y   +Y
Sbjct: 223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 282

Query: 210 DGRKHCCV-------------EGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQL 255
                                    + +  S SK Y G  G+R GY+   +       QL
Sbjct: 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQL 342

Query: 256 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-- 313
           +K+  ++ +C  +  Q  A+  +   P    E  +   R +E +   L+   +       
Sbjct: 343 VKLL-SVRLCPPVSGQA-AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFN 400

Query: 314 ---G------EGAIYLWAR--LPEKHL---------DDFEVVRWLAHRHGVVVIPG---G 350
              G      +GA+Y + R  +P K +          D      L    G+ V+PG   G
Sbjct: 401 QVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFG 460

Query: 351 ACGCRGHLRISFGGLV-EDDCKAAADRLRRGLEELVK 386
                 H R++   L   +  K    +++      ++
Sbjct: 461 QREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINFLE 495

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  128 bits (323), Expect = 2e-33
 Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 62/374 (16%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGAN 99
            PK+  + +   + +    KY    GLPELR A    L +          + ++   G+ 
Sbjct: 44  TPKVITDALTASLHELE--KYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSR 101

Query: 100 QAFVNIVLTLCD-----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           +A  + V T+ +        ++V   P+Y     +  + G        C + + +PD   
Sbjct: 102 EALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWRS 160

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR 212
           + +  E     KLV V +P NPSG+ +     K + DL    G  +  D  Y    +DG 
Sbjct: 161 ISE--EVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN 218

Query: 213 K------HCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI- 262
           K           G     ++   S SK   + G R G++A  +E+       L  +    
Sbjct: 219 KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK---NFLLYRTYHG 275

Query: 263 -----PI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316
                P+  ASI     A        + V +  +      E +   L  + +  VK  + 
Sbjct: 276 SAMSIPVQRASIA----AW----DDEQHVIDNRRLYQEKFERVIPILQQVFD--VKLPDA 325

Query: 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG---------GACGCRGHLRISFGGLVE 367
           + Y+W ++P+   DD    R L  +  + V+PG         G  G  G++RI    LV 
Sbjct: 326 SFYIWLKVPDG--DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRI---ALVA 379

Query: 368 DD--CKAAADRLRR 379
           D   C  AA+ +  
Sbjct: 380 DVATCVKAAEDIVS 393

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  129 bits (325), Expect = 3e-33
 Identities = 86/394 (21%), Positives = 144/394 (36%), Gaps = 56/394 (14%)

Query: 43  QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQ 100
                  +++  ++   +   Y   +G+  LRDA+   +   +        + +T GA+ 
Sbjct: 109 ADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASP 168

Query: 101 AFVNIVLTLC-DAGDSVVMFAPYYFNSYM-SFQMTGVTHILVGPCSSKTLHPDADWLEKT 158
               ++  L  +  D +++  P Y   Y  S  + G   +      S     +   ++K 
Sbjct: 169 GVHLMMQLLIRNEKDGILVPIPQY-PLYSASIALHGGALVPYYLNESTGWGLETSDVKKQ 227

Query: 159 LE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMY-DG 211
           LE         + + V+NPGNP+G  + E     I   CK  G  L+ D  Y   +Y D 
Sbjct: 228 LEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN 287

Query: 212 RKHCCV-----------EGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ 259
           +K               E   +V+  S SK Y G  G R GY            Q+ K+ 
Sbjct: 288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA 347

Query: 260 DNIPICASIISQHLALY----------SLQTGPEWVTERVKDLVRNREIIREALSPLGEG 309
            ++ +C++I  Q LA            S  +        +  L R  + +  A + L EG
Sbjct: 348 -SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL-EG 405

Query: 310 --AVKGGEGAIYLWAR--LPEKHL---------DDFEVVRWLAHRHGVVVIPG---GACG 353
               +  EGA+Y++ +  LP+K +          D      L    G+VV+PG   G   
Sbjct: 406 ITCNE-AEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVP 464

Query: 354 CRGHLRISFGGLV-EDDCKAAADRLRRGLEELVK 386
              H R +   L  ED   A   R     E  + 
Sbjct: 465 GTWHFRCTI--LPQEDKIPAVISRFTVFHEAFMS 496

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  126 bits (318), Expect = 1e-32
 Identities = 76/433 (17%), Positives = 138/433 (31%), Gaps = 76/433 (17%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQP-PKM---AMEKVKELVWDPSIS 62
           + K A    + +  Q  E  +     +++ +G    QP       +   +  L     + 
Sbjct: 2   MTKEASRPALDLARQAYEAFKARGLNLNMQRG----QPADADFDLSNGLLTVLG-AEDVR 56

Query: 63  KYGAD--------EGLPELRDALVKKLNQENK---------LYKSSVMVTAGANQAFVNI 105
             G D         GLP  R      L+ + +         L    +++T          
Sbjct: 57  MDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGS 116

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165
                     +++  P Y   ++  Q  G   + V    S    PD D +E+   T P+ 
Sbjct: 117 TGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAVERLAGTDPSV 173

Query: 166 KLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY----FMYDGR------- 212
           K +  V    NP G T   E+  +       A    +  D+ Y     + + R       
Sbjct: 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFV 233

Query: 213 KHCCVEG--DHVVNLFSFSKAYGMM--GWRVGYIAYPSEVEGFATQLLKVQDNIPICASI 268
                 G  D      S SK   +   G  +G++A   +   + ++ L  Q    I  + 
Sbjct: 234 VLARDAGYPDRAFVFASTSK---ITFAGAGLGFVASSEDNIRWLSKYLGAQS---IGPNK 287

Query: 269 ISQHLALYSLQTGPEWVT---ERVKDLVRNR-----EIIREALSPLGEGAV----KGGEG 316
           + Q   +  L   P  +         ++  +     E++R  L   GE A     KGG  
Sbjct: 288 VEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGG-- 345

Query: 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDC 370
             ++     E       VV+ LA   GV + P GA           +LR++      ++ 
Sbjct: 346 -YFISLDTAEP--VADRVVK-LAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEV 401

Query: 371 KAAADRLRRGLEE 383
           + A   +   +  
Sbjct: 402 RTAMQVVAACIRL 414

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  123 bits (311), Expect = 1e-31
 Identities = 76/365 (20%), Positives = 135/365 (36%), Gaps = 60/365 (16%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCDAGD 114
           Y    G+PEL   L +   + +               + VT+G+ Q    +   + + GD
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133

Query: 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----------TKPT 164
           +V++  P Y  +  S    G   I V       + PD+  L   L            K T
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINV-ASDESGIVPDS--LRDILSRWKPEDAKNPQKNT 190

Query: 165 PKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYFM--YDGR-----KHC 215
           PK +  V N  NP+G +   ER  K I +L +     ++ D+ Y+   ++          
Sbjct: 191 PKFLYTVPNGNNPTGNSLTSER-KKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSM 249

Query: 216 CVEGDHVVNLFSFSK--AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
            V+G  V+   SFSK  + G+   R+G++  P  +     +++       +  S  +Q +
Sbjct: 250 DVDG-RVIRADSFSKIISSGL---RIGFLTGPKPL---IERVILHIQVSTLHPSTFNQLM 302

Query: 274 ALYSLQTG-----PEWVTERVKDLVRNREIIREALSP-LGEGAV----KGGEGAIYLWAR 323
               L           V   +      ++ I  A    L   A       G   ++LW +
Sbjct: 303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAG---MFLWIK 359

Query: 324 LPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----GCRGHLRISFGGLVEDDCKAAADRLR 378
           +     D  E++   A + GV+++PG A          +LR SF     +    A   L 
Sbjct: 360 VKG-INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLA 418

Query: 379 RGLEE 383
           + ++E
Sbjct: 419 QLIKE 423

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score =  114 bits (288), Expect = 7e-29
 Identities = 65/310 (20%), Positives = 116/310 (37%), Gaps = 40/310 (12%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           +     + +   +       +    V+V+ GA++    ++   C+ G   +++ P  +  
Sbjct: 57  ECQPKAVIENYAQYAG----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 112

Query: 127 Y-MSFQMTGVTHILVGPCSSKTLHP-DADW---LEKTLETKPTPKLVSVVNPGNPSGTYI 181
           Y +S +  GV    V         P   +W   L+   +     K+V V +P NP+G  I
Sbjct: 113 YSVSAETIGVECRTV---------PTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLI 163

Query: 182 PERLLKRISDLCKAAGSWLVV-DNTYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGW 237
             +  + +  L    G  +VV D  Y  +  +        E  H+  L + SKA+ + G 
Sbjct: 164 NPQDFRTL--LELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGL 221

Query: 238 RVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQ-TGPEWVTERVKDLVR 294
           R G+     EV      L+KV     +    S     +A  +L   G   + ERV  ++ 
Sbjct: 222 RCGFTLANEEV---INLLMKVIAPYPL----STPVADIAAQALSPQGIVAMRERVAQIIA 274

Query: 295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG 353
            RE +  AL  +            Y+ AR          V + L  + G+++        
Sbjct: 275 EREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLWDQ-GIILRDQNKQPS 329

Query: 354 CRGHLRISFG 363
             G LRI+ G
Sbjct: 330 LSGCLRITVG 339

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score =  114 bits (286), Expect = 3e-28
 Identities = 54/374 (14%), Positives = 112/374 (29%), Gaps = 64/374 (17%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT--------------L 109
           YG  +G+ ++R      L    +     V+    ++   +  V++               
Sbjct: 74  YGGLDGIVDIRQIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWS 129

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
            +     +   P Y   +   +  G   I V P +      DA  +E+ ++      +  
Sbjct: 130 KEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDGPDMDA--VEELVKNPQVKGMWV 186

Query: 170 VVNPGNPSG-TYIPERLLKRISDLCKAA-GSWLVVDNTYFM--YDGRKHCCV-------- 217
           V    NP+G T   +   KR+S +  AA    +V DN Y +          +        
Sbjct: 187 VPVFSNPTGFTVTEDV-AKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA 245

Query: 218 --EGDHVVNLFSFSKAYGMM--GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
               +      S SK   +   G  V +    +E   + T    ++    I  + ++Q  
Sbjct: 246 AGNPNRFWAFTSTSK---ITLAGAGVSFFLTSAENRKWYTGHAGIRG---IGPNKVNQLA 299

Query: 274 ALYSLQTGPEWVT--ERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPE 326
                           +    +  +     EI+   L+  G        G  ++   +  
Sbjct: 300 HARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP 359

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDCKAAADRLRRG 380
                  V   LA   G+ +   G+           +LR++      ++ + A D +   
Sbjct: 360 G--TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVA-- 414

Query: 381 LEELVKDGMVQEHV 394
               V     + + 
Sbjct: 415 --TCVLLAAAEHYA 426

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score =  112 bits (282), Expect = 4e-28
 Identities = 61/359 (16%), Positives = 119/359 (33%), Gaps = 46/359 (12%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
               A    ++ V     ++Y A   +  L + L         +   S+++TAG+++   
Sbjct: 30  MSPKAQAAARDAV--VKANRY-AKNEILMLGNKLAAHHQ----VEAPSILLTAGSSEGIR 82

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
             +         +V+     +     F ++ G+    V          D + L+  +   
Sbjct: 83  AAIEAYASLEAQLVIPELT-YGDGEHFAKIAGMKVTKV-KMLDNWAF-DIEGLKAAVAAY 139

Query: 163 PTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTYFMY-------DG 211
             P +V +VNP NP+GT  P    E  +              +VD  Y  +         
Sbjct: 140 SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANT-----MFIVDEAYAEFVNDPRFRSI 194

Query: 212 RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQ 271
                   ++++ L +FSK + M G RVGY      V      + +         +    
Sbjct: 195 SPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTV---IALMGRYVA--GEKINFSGV 249

Query: 272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 331
             AL S+     ++T   K    +R+I+ +AL  L    +       +++ +L       
Sbjct: 250 DAALASMN-DSAFITYSKKSNDVSRQILLKALEDLKLPYLPS--EGNFVFHQLVV---PL 303

Query: 332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMV 390
            +    +A   GV++            RIS G     +       +   + E  K   +
Sbjct: 304 KDYQTHMA-DAGVLIGRAFP-PADNWCRISLG--TPQEM----QWVADTMREFRKKSWI 354

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score =  108 bits (272), Expect = 1e-26
 Identities = 63/361 (17%), Positives = 145/361 (40%), Gaps = 57/361 (15%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            P  A+E +++         Y  D+ + EL+  L +K      +   ++++ AG++Q   
Sbjct: 44  TPPKAIECLRQNA--NKAHLY-PDDSMIELKSTLAQKYK----VQNENIIIGAGSDQVIE 96

Query: 104 NIVLTLCDAGDSVVM----FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
             + +  ++ ++ +     FA Y   +    +  G           +++  + D  +K  
Sbjct: 97  FAIHSKLNSKNAFLQAGVTFAMYEIYA----KQCGAKCYKT-----QSITHNLDEFKKLY 147

Query: 160 ET-KPTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTYFMY----D 210
           ET K   KL+ +  P NP G  +        +K +++ C      +V+D  Y  +    D
Sbjct: 148 ETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDC-----LVVIDAAYNEFASFKD 202

Query: 211 GRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 265
            +KH        E D+V+ L +FSK YG+ G R+GY    + +    +   K+    P  
Sbjct: 203 SKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANI---ISAFYKL--RAPFN 257

Query: 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 325
            S ++   A+ ++    E+  + +++     E+ +E         +       ++     
Sbjct: 258 VSNLALKAAVAAMD-DDEFTEKTLENNFSQMELYKEFAKKHNIKIIDS--YTNFITYFFD 314

Query: 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385
           EK  +  ++   L  + G+++    + G    +RI+ G     +     ++     ++++
Sbjct: 315 EK--NSTDLSEKLL-KKGIIIRNLKSYGL-NAIRITIG--TSYEN----EKFFTEFDKIL 364

Query: 386 K 386
           +
Sbjct: 365 R 365

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  107 bits (269), Expect = 3e-26
 Identities = 62/334 (18%), Positives = 107/334 (32%), Gaps = 46/334 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
             K                 Y  D     LR  +         L +  ++ TAG ++   
Sbjct: 46  TSKKVAAIQANSS--VETEIY-PDGWASSLRKEVADFYQ----LEEEELIFTAGVDELIE 98

Query: 104 NIVLTLCDAGDSVVM----FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159
            +   L D   + VM    F  Y  N+     + G     + P      H     L    
Sbjct: 99  LLTRVLLDTTTNTVMATPTFVQYRQNA----LIEGAEVREI-PLLQDGEHDLEGMLNAI- 152

Query: 160 ETKPTPKLVSVVNPGNPSGTYIP----ERLLKRISDLCKAAGSWLVVDNTYF------MY 209
                  +V + NP NP+G YI     +  L R+          +V+D  Y         
Sbjct: 153 --DEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDV-----LVVLDEAYIEYVTPQPE 205

Query: 210 DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 269
              K       +++   +FSK YG+   RVGY     E+     QL  V+   P   + I
Sbjct: 206 KHEKLV-RTYKNLIITRTFSKIYGLASARVGYGIADKEI---IRQLNIVR--PPFNTTSI 259

Query: 270 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL 329
            Q LA+ +++    ++ E         +          +  +       ++   L     
Sbjct: 260 GQKLAIEAIK-DQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI--- 314

Query: 330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363
           +   +  +L  ++G +   G A G    +RI+ G
Sbjct: 315 EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG 347

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score =  106 bits (267), Expect = 5e-26
 Identities = 74/382 (19%), Positives = 129/382 (33%), Gaps = 61/382 (15%)

Query: 16  MPIMVQIQELVRGAKNAVSLAQ-----GVVYWQPPKMAMEKVKELVWDPSISKYGADEGL 70
           M +   +   VR A  AV LA                    +        I++Y   +  
Sbjct: 2   MSVGEAMDTEVRAAAQAVCLAFNENPEA-----VEPRVQAAIAAAA--ARINRY-PFDAE 53

Query: 71  PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MS 129
           P +   L +  +      + ++M+  G ++ F  I           V  A   F+ Y   
Sbjct: 54  PRVMRKLAEHFS----CPEDNLMLVRGIDECFDRISAEFS--SMRFV-TAWPGFDGYRAR 106

Query: 130 FQMTGVTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIP---- 182
             ++G+ H  +G           D         +       V + NP NP+G  +     
Sbjct: 107 IAVSGLRHFEIGL--------TDDLLLDPNDLAQVSRD-DCVVLANPSNPTGQALSAGEL 157

Query: 183 ERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGY 241
           ++L +R   L        ++D TY  Y   +   +  G++ +   SFSK+YG+ G R+G 
Sbjct: 158 DQLRQRAGKL--------LIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGA 209

Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301
           +  PSE+      + + Q         +  H    +L          +   +  R  + +
Sbjct: 210 LFGPSEL---IAAMKRKQW--FCNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVAD 263

Query: 302 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 361
           AL  LG         A ++              +R+L  R G+ V   G  G   H+RIS
Sbjct: 264 ALRGLGYRVASS--EANFVLVENA----AGERTLRFLRER-GIQVKDAGQFGLHHHIRIS 316

Query: 362 FGGLVEDDCKAAADRLRRGLEE 383
            G   E+D       L    + 
Sbjct: 317 IG--REEDNDRLLAALAEYSDH 336

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score =  107 bits (269), Expect = 6e-26
 Identities = 51/355 (14%), Positives = 113/355 (31%), Gaps = 56/355 (15%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT--------------L 109
           YG   G+ ++R+   + L          V+   G++   +  +++               
Sbjct: 72  YGGLLGIADIRELWAEALGLP----ADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWS 127

Query: 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169
            +     +   P Y   +   +  G   I V P + +        + + ++      + +
Sbjct: 128 AEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDEGPDMGV--VRELVKDPQVKGMWT 184

Query: 170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVV-DNTY----------FMYDGRKHCCV 217
           V   GNP+G T+  +   + ++++  AA  + +V DN Y           +++  +    
Sbjct: 185 VPVFGNPTGVTFSEQT-CRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA 243

Query: 218 EG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 275
            G  +    + S SK     G  V + A   E   +      V+    I  + ++Q    
Sbjct: 244 AGNPNRFWFMSSTSKIT-HAGSGVSFFASSKENIEWYASHANVRG---IGPNKLNQLAHA 299

Query: 276 YSLQTGPEWVT--ERVKDLVRNR-----EIIREALSPLGEGAVKGGEGAIYLWARLPEKH 328
                         +    +  +     EI+   LS  G        G  ++   +    
Sbjct: 300 QFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG- 358

Query: 329 LDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGGLVEDDCKAAADRL 377
                VV  LA   G+ +   G+           ++R++       + + A D  
Sbjct: 359 -TASRVVE-LAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGF 411

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  106 bits (266), Expect = 8e-26
 Identities = 68/375 (18%), Positives = 124/375 (33%), Gaps = 78/375 (20%)

Query: 44  PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99
           P +  +  +   V      +++Y  +    ELRD L   + ++    + + ++    G+N
Sbjct: 44  PSEALVADLVATVDKIATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSN 102

Query: 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-DADW 154
           +    ++      G + + F P    SY    +  + T    I V            AD+
Sbjct: 103 EILQQLLQAFGGPGRTALGFQP----SYSMHPILAKGTHTEFIAV---------SRGADF 149

Query: 155 ---LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMY 209
              ++  LE      P +V V  P NP+G       ++RI      A   ++VD  Y  +
Sbjct: 150 RIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERI---INVAPGIVIVDEAYAEF 206

Query: 210 DGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIP 263
                           +V   + SKA+   G R+GY             ++ V+   ++ 
Sbjct: 207 SPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAF---IDAVMLVRLPYHL- 262

Query: 264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA---------VKGG 314
              S +SQ  A+ +L+         V+ L   R  +   L  LG                
Sbjct: 263 ---SALSQAAAIVALR-HSADTLGTVEKLSVERVRVAARLEELGYAVVPSESNFVFFGDF 318

Query: 315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 374
                 W    +                GV++      G  GHLR + G  V ++     
Sbjct: 319 SDQHAAWQAFLD---------------RGVLIRD---VGIAGHLRTTIG--VPEEN---- 354

Query: 375 DRLRRGLEELVKDGM 389
           D       E++K  +
Sbjct: 355 DAFLDAAAEIIKLNL 369

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  101 bits (253), Expect = 5e-24
 Identities = 58/353 (16%), Positives = 117/353 (33%), Gaps = 42/353 (11%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            P      + + +    I +Y  D     L  AL +       +  S ++   G  ++  
Sbjct: 38  MPVSVKRALIDNL--DCIERY-PDADYFHLHQALARHHQ----VPASWILAGNGETESIF 90

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
            +   L       ++  P  F  Y  +   +G          +         LE      
Sbjct: 91  TVASGL--KPRRAMIVTPG-FAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD- 146

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV----E 218
                + +  P NP+G      LL+ I+D CK+    L++D  +  +   +   +    +
Sbjct: 147 --LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKD 204

Query: 219 GDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD--NIPICASIISQHLAL 275
             H+  L S +K Y + G R+GY +      +    ++ + Q   ++    + ++     
Sbjct: 205 NPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQMPWSV----NALAALAGE 257

Query: 276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 335
            +LQ    W       L        +AL  L    V  G  A YL  R      +D ++ 
Sbjct: 258 VALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQ 312

Query: 336 RWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           R L     +++            + R++     ++      +RL   L  ++ 
Sbjct: 313 RRLL-TQRILIRSCANYPGLDSRYYRVAIRSAAQN------ERLLAALRNVLT 358

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score =  100 bits (252), Expect = 6e-24
 Identities = 60/359 (16%), Positives = 119/359 (33%), Gaps = 49/359 (13%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
                 + + E +    I  Y  +     LR  L K+ +    +  ++++VT G   AF 
Sbjct: 29  DKDHLEKHLVENL--NCIRHY-PEPDAGTLRQMLAKRNS----VDNNAILVTNGPTAAFY 81

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162
            I       G   ++  P  F  Y  + +M                  + D  E      
Sbjct: 82  QIAQAF--RGSRSLIAIPS-FAEYEDACRMYEHEVCFY--------PSNEDIGEADFSN- 129

Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV----E 218
                  + NP NP G  +    + R+  L     +  V+D +Y  +   +         
Sbjct: 130 --MDFCWLCNPNNPDGRLLQRTEILRL--LNDHPDTTFVLDQSYVSFTTEEVIRPADIKG 185

Query: 219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALY 276
             ++V ++SFS AYG+ G R+GYI    +      ++        +    + ++   A +
Sbjct: 186 RKNLVMVYSFSHAYGIPGLRIGYIVANKDF---MKRVAAFSTPWAV----NALAIEAAKF 238

Query: 277 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 336
            L   P   T  ++   RN      AL+ L    V       +   RL +      E+ +
Sbjct: 239 ILI-HPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKK 294

Query: 337 WLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMVQEH 393
           ++   + +++            ++RI+       +         + LE  ++      H
Sbjct: 295 YMLEEYNMLIRDASNFRGLDESYVRITT-QRPAQN-----QLFIKALETFLEKYEGHHH 347

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 98.0 bits (245), Expect = 5e-23
 Identities = 69/366 (18%), Positives = 133/366 (36%), Gaps = 61/366 (16%)

Query: 44  PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101
           P    ++ + E +     ++  Y       +LR+   +          S +++  G+++ 
Sbjct: 40  PSPEVVKAILEELGPDGAALRIY-PSASSQKLREVAGELYG----FDPSWIIMANGSDEV 94

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKTLHPDADWLE 156
             N++      G+ +    P Y     S+     ++ G      G      L  D     
Sbjct: 95  LNNLIRAFAAEGEEIGYVHPSY-----SYYGTLAEVQGARVRTFG------LTGDFRIAG 143

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDG----- 211
                +   K+  +  P  P G   P   L+ I +L +     LV+D TY  +       
Sbjct: 144 FPERYEG--KVFFLTTPNAPLGPSFP---LEYIDELARRCAGMLVLDETYAEFAESNALE 198

Query: 212 --RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--NIPICAS 267
             R+H     ++VV   + SK+Y + G R+G      EV      L K++D  N+     
Sbjct: 199 LVRRH-----ENVVVTRTLSKSYSLAGMRIGLAIARPEV---IAALDKIRDHYNL----D 246

Query: 268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 327
            ++Q   + +L+    +++E  + +   RE     L  +G   +       YL+A  P++
Sbjct: 247 RLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIGYDVIPS--QGNYLFATPPDR 303

Query: 328 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 387
             D   V   L  R  V+V           +RIS G    ++     ++    L+E+ + 
Sbjct: 304 --DGKRVYDGLYAR-KVLVRHFSDPLLAHGMRISIG--TREEM----EQTLAALKEIGEG 354

Query: 388 GMVQEH 393
                H
Sbjct: 355 HHHHHH 360

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 97.6 bits (244), Expect = 7e-23
 Identities = 55/367 (14%), Positives = 124/367 (33%), Gaps = 69/367 (18%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103
            PK  +  + E +   ++  Y  D     L  ++   L     L    +++  GA++   
Sbjct: 40  IPKSFLNNIDEGI--KNLGVY-PDVNYRRLNKSIENYLK----LKDIGIVLGNGASE--- 89

Query: 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW---LEKTLE 160
            I+       + +++  P       S+    +     G  S    + D +     E  + 
Sbjct: 90  -IIELSISLFEKILIIVP-------SYAEYEINAKKHG-VSVVFSYLDENMCIDYEDIIS 140

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---HC 215
                  V + NP NP+G  I +     +  L +     +++D  +  F  D        
Sbjct: 141 KIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGE 200

Query: 216 CVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD--NIPICASIISQH 272
                 +  + + +K + M G R GY I    E+   A ++   Q+  NI    +  ++ 
Sbjct: 201 IKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEI---AAKIKAKQNPWNI----NCFAEM 253

Query: 273 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-----------VK-GGEGAIYL 320
            A+  L+    ++ E +  + + R+   E L+ +G               +        L
Sbjct: 254 AAINCLK-DTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKL 312

Query: 321 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 380
           +  L ++ +    V+R   +  G+             +R +     ++       +  R 
Sbjct: 313 YDSLLKEDI----VIRRCCNFIGL---------DDSFVRFAIKDEKKN------TKFLRA 353

Query: 381 LEELVKD 387
           L+ +  +
Sbjct: 354 LKGVENN 360

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 97.3 bits (243), Expect = 1e-22
 Identities = 65/374 (17%), Positives = 132/374 (35%), Gaps = 80/374 (21%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN---QENKLYKSSVMVTAGANQ 100
            P     ++   + + ++++Y        LR  L + +             V++  G+++
Sbjct: 44  LPPALRSELAARLGEVALNRY-PVPSSEALRAKLKEVMQVPAGME------VLLGNGSDE 96

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-DADW- 154
               + L     G  V+   P     +    MS Q  G+  + V         P  AD+ 
Sbjct: 97  IISMLALAAARPGAKVMAPVP----GFVMYAMSAQFAGLEFVGV---------PLRADFT 143

Query: 155 --LEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW--LVVDNTYFM 208
                 L    +  P +V +  P NP+G       ++ I    + +     +VVD  Y  
Sbjct: 144 LDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP 203

Query: 209 YDG-------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD- 260
           +                  +++ + + SK  G+ G R+GY+A   +      QL KV+  
Sbjct: 204 FAQESWMSRLTDF-----GNLLVMRTVSK-LGLAGIRLGYVAGDPQW---LEQLDKVRPP 254

Query: 261 -NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---- 315
            N+    +++++  AL++L+     + E+   L   R  + E ++     A  G      
Sbjct: 255 YNV----NVLTEATALFALE-HVAVLDEQAAQLRAERSRVAEGMA-----AHGGVTVFPS 304

Query: 316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAA 373
            A +L AR+P+      +    L  R  V++             LR++     E+     
Sbjct: 305 AANFLLARVPDAA----QTFDRLLAR-KVLIKNVSKMHPLLANCLRVTVSTPEEN----- 354

Query: 374 ADRLRRGLEELVKD 387
             +        ++D
Sbjct: 355 -AQFLEAFAASLQD 367

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 89.1 bits (222), Expect = 4e-20
 Identities = 78/387 (20%), Positives = 150/387 (38%), Gaps = 74/387 (19%)

Query: 19  MVQIQELVRGAKNAVSLAQGVVY-------WQPPKMAMEKVKELVWDPSISKYGADEGLP 71
           M  +  + + A    +  +   Y       +  P+  +++V   +   ++  Y  D    
Sbjct: 1   MNPLDLIAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDE 59

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF- 130
           EL + ++  L+ +  L K++V V  GA++    I+  +    D  V F P Y     S  
Sbjct: 60  ELIEKILSYLDTDF-LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-----SCY 109

Query: 131 ----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
               +  G   + V P     L  D    E          +V + NP NP+G       +
Sbjct: 110 RIFAKAVGAKFLEV-P-----LTKDLRIPE---VNVGEGDVVFIPNPNNPTGHVFEREEI 160

Query: 187 KRISDLCKAAGSWLVVDNTYFMYDG-------RKHCCVEGDHVVNLFSFSKAYGMMGWRV 239
           +RI       G+++ +D  Y+ + G       +K+     +++  + +FSKA+ +   RV
Sbjct: 161 ERILK----TGAFVALDEAYYEFHGESYVDFLKKY-----ENLAVIRTFSKAFSLAAQRV 211

Query: 240 GYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 297
           GY+    +         +V+   N+    S +SQ  A  +L    E   ER K +V  RE
Sbjct: 212 GYVVASEKF---IDAYNRVRLPFNV----SYVSQMFAKVALD-HREIFEERTKFIVEERE 263

Query: 298 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 357
            ++ AL  +G           +++  + ++  +   ++  L  +  V V        R  
Sbjct: 264 RMKSALREMGYRITD--SRGNFVFVFMEKE--EKERLLEHLRTK-NVAVRS-----FREG 313

Query: 358 LRISFGGLVEDDCKAAADRLRRGLEEL 384
           +RI+ G    ++     D + R LE  
Sbjct: 314 VRITIG--KREEN----DMILRELEVF 334

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 70/391 (17%), Positives = 139/391 (35%), Gaps = 82/391 (20%)

Query: 57  WDPSISKYGADEGLP------------ELRDALVKKLNQ---------ENKLY------- 88
           WD    ++G  + LP             + +AL ++L            ++         
Sbjct: 18  WDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWF 77

Query: 89  ---------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHIL 139
                      +V+           ++    + G+ VV+  P Y   Y + +    T + 
Sbjct: 78  STQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMP 137

Query: 140 VGPCSSKTLHPDA-----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LK 187
           V       L   A     D   LE  L  KP  K++ + +P NP+G     ++     L+
Sbjct: 138 V------ALEKQADGWFCDMGKLEAVL-AKPECKIMLLCSPQNPTG-----KVWTCDELE 185

Query: 188 RISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYI 242
            ++DLC+  G  ++ D  +   ++  + H     V       L S SK++ +      Y 
Sbjct: 186 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYG 245

Query: 243 AYPSEV--EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 300
              +    + + +  LK +D +    S+++    + + Q G  W+      L  N   I 
Sbjct: 246 IIENSSSRDAYLSA-LKGRDGLSSP-SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIA 303

Query: 301 EALSPLGEGA-VKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRG 356
           + ++        +  +   YL W  L   ++DD  + + L  +  V ++PG   G   RG
Sbjct: 304 DKMNAAFPELNWQIPQST-YLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRG 362

Query: 357 HLRISFG---GLVEDDCKAAADRLRRGLEEL 384
            +R++ G     +E         L   +  +
Sbjct: 363 FVRLNAGCPRSKLEK----GVAGLINAIRAV 389

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 65.6 bits (161), Expect = 6e-12
 Identities = 49/311 (15%), Positives = 106/311 (34%), Gaps = 32/311 (10%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
              +       +     +     A   V++  P Y   +     T    I +      T 
Sbjct: 81  PEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFID----ATG 136

Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-- 206
             +   +EK    +   + + + NP NP G       L  + DL     + ++VD  +  
Sbjct: 137 GINLHDVEKGF--QAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAP 194

Query: 207 FMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261
            ++DG+               + + + SKA+ + G +   I + +     A    ++   
Sbjct: 195 LVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEHWQQLSPV 252

Query: 262 IPICASIISQ--HLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEGAVKGGEGAI 318
           I   AS +      A Y  + G +++ + V  L  N + +   +   +    +   +   
Sbjct: 253 IKDGASTLGLIAAEAAY--RYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQAT- 309

Query: 319 YL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFG---GLVEDDCKA 372
           YL W    +  ++      +   +  V +  G   G    G  R++F     ++E+    
Sbjct: 310 YLMWIDFRDTTIEG-SPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEE---- 364

Query: 373 AADRLRRGLEE 383
           A DR+ + +  
Sbjct: 365 AIDRMAKAVSH 375

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 59/319 (18%), Positives = 114/319 (35%), Gaps = 40/319 (12%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           K  ++   G   A    +    + GD+V++ +P Y+    + ++     ++         
Sbjct: 119 KEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDH-RLVENSLQIING 177

Query: 149 HPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWLV 201
             + D+  LEK +      K+  + +P NP G     R+     L +I++LCK  G  LV
Sbjct: 178 RFEIDFEQLEKDI-IDNNVKIYLLCSPHNPGG-----RVWDNDDLIKIAELCKKHGVILV 231

Query: 202 VDNTY--FMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--EGF 251
            D  +      G  H           D  + L S +K + + G +  +    +E     F
Sbjct: 232 SDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKF 291

Query: 252 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV 311
             + L    +       +       + Q G  W+ E    +  N +++ + L    +  V
Sbjct: 292 QYRQLANNQHEV---PTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKV 348

Query: 312 KGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG---G 364
              EG  YL W       +   ++   L +   VV+  G   G  G +   R++      
Sbjct: 349 MEPEGT-YLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEG-KYFARLNVATPKN 406

Query: 365 LVEDDCKAAADRLRRGLEE 383
            V++    A  R+     +
Sbjct: 407 TVQE----ALSRIISVFGK 421

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 59/322 (18%), Positives = 114/322 (35%), Gaps = 43/322 (13%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG---VTHILVGPCSS 145
              ++ TAG   A  N V      GD V++  P Y+  +M+ +      +   L+     
Sbjct: 89  TDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELL--EKD 146

Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWL 200
                D   LEK  +     K +   +P NP G     R+     L++I D+   +   L
Sbjct: 147 GYYTIDFQKLEKLSKD-KNNKALLFCSPHNPVG-----RVWKKDELQKIKDIVLKSDLML 200

Query: 201 VVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--EG 250
             D  +   +  G +H           D  +   + SK + + G  +  I   +    E 
Sbjct: 201 WSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRER 260

Query: 251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEG 309
           F               + +         +   +W+   +K + +N+ I+++       E 
Sbjct: 261 FTKSRDATSGMPF---TTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEI 317

Query: 310 AVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG-- 363
                EG  YL W       +D   +  ++ H+  +    G   G  G  G  RI+    
Sbjct: 318 KAPLIEGT-YLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGG-IGFERINLAAP 375

Query: 364 -GLVEDDCKAAADRLRRGLEEL 384
             ++++    + +RL + L++L
Sbjct: 376 SSVIQE----SLERLNKALKDL 393

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 61.4 bits (150), Expect = 1e-10
 Identities = 64/326 (19%), Positives = 117/326 (35%), Gaps = 51/326 (15%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           +   +  +G   A   +V      GD +++  P Y   Y   +  G   I         L
Sbjct: 85  EDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS------DL 138

Query: 149 HPDA-----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAA 196
             +      +W  LE+ L T P+ +++   NP NP G            +KRI++LC   
Sbjct: 139 IYENSKYSVNWADLEEKLAT-PSVRMMVFCNPHNPIG-----YAWSEEEVKRIAELCAKH 192

Query: 197 GSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
              L+ D  +   +                 + VV+L S SK + +          P+  
Sbjct: 193 QVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPD 252

Query: 249 --EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SP 305
                           P   ++++   A+ + + G +W+ E  + L  N    RE L   
Sbjct: 253 LRARAEESFFLAGIGEP---NLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE 309

Query: 306 LGEGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRIS 361
           + E  V     + YL W  +    ++  +  ++L  + G+++  G      G    +RI+
Sbjct: 310 VPEVKVLDSNAS-YLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNG-HEFVRIN 367

Query: 362 FG---GLVEDDCKAAADRLRRGLEEL 384
                 LV D       RL++G+  L
Sbjct: 368 LACPKELVID----GMQRLKQGVLNL 389

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 67/386 (17%), Positives = 131/386 (33%), Gaps = 78/386 (20%)

Query: 57  WDPSISKYGADEGLP------------ELRDALVKKLNQE--------NKLY-------- 88
           W     KYG ++ LP             + D+L  +L QE        +           
Sbjct: 22  WSEMEKKYGTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLY 81

Query: 89  --------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140
                      ++ + G   A   ++  L  A D +++  P Y       +      I+ 
Sbjct: 82  RRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS 141

Query: 141 GPCSSKTLHPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLC 193
                +  +   D+  +E  ++     KL  + NP NP G     R+     LK++ D+C
Sbjct: 142 PLQKLENGNYIMDYEDIENKIK---DVKLFILCNPHNPVG-----RVWTKDELKKLGDIC 193

Query: 194 KAAGSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYP 245
                 ++ D  +   +    KH  +         + +   + +K + + G +  Y+  P
Sbjct: 194 LKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLP 253

Query: 246 SEV--EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
            E   +       ++        +  S      S   G  W+   ++ L  N +   + +
Sbjct: 254 DEKDYKLLDDAFTRIDIKRN---NCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYI 310

Query: 304 -SPLGEGAVKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHL 358
              + +  V+  EG  YL W       L D E+   L  +  V +  G   G  G  G+ 
Sbjct: 311 NENMPKLKVRKPEGT-YLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGG-SGYQ 368

Query: 359 RISFG---GLVEDDCKAAADRLRRGL 381
           RI+      ++E+    A  R++  +
Sbjct: 369 RINLACPRSMLEE----ALIRIKNAI 390

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 62/319 (19%), Positives = 107/319 (33%), Gaps = 41/319 (12%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL 148
           K  ++   G   A    +      G++V++ +P Y     S ++     +       +  
Sbjct: 89  KEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENG 147

Query: 149 HPDADW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERL-----LKRISDLCKAAGSWLV 201
               D+  LE  +  +   KL  + NP NP G     R+     L++I  LC+     LV
Sbjct: 148 LFQIDFEQLENDI-VENDVKLYLLCNPHNPGG-----RVWEREVLEQIGHLCQKHHVILV 201

Query: 202 VDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--EGF 251
            D  +      G +H           D  + L S +K + + G +  Y    +      F
Sbjct: 202 SDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQF 261

Query: 252 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEGA 310
             Q L    +     S +       + + G  W+      L  N +   E          
Sbjct: 262 KHQQLVNNHHEV---SSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLK 318

Query: 311 VKGGEGAIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPG---GACGCRGHLRISFG--- 363
           V   +G  YL W    +  L D  +   L  +  V++  G   G+ G   H R++     
Sbjct: 319 VMKPQGT-YLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEG-ELHARLNIAAPK 376

Query: 364 GLVEDDCKAAADRLRRGLE 382
            LVE+       R+   L 
Sbjct: 377 SLVEE----ICKRIVCCLP 391

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A* Length = 445

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 26/117 (22%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLE 156
           A   ++L L  AG  +V     Y  + +  +      G+T  ++ P        D   LE
Sbjct: 141 ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-------DVGALE 193

Query: 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
             L  +    L    +P NP         L+      +S LC   G+ + +D T F 
Sbjct: 194 LAL-NQKKVNLFFTESPTNP--------FLRCVDIELVSKLCHEKGALVCIDGT-FA 240

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis} Length = 414

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLET 161
           +  L  AGD +V     + + ++         GV  + V          D    E+ L  
Sbjct: 113 LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG-------DDLSQWERAL-- 163

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
               + V    P NP  + +    +  +++L  AAG+ +V+DN +
Sbjct: 164 SVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVF 205

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A* Length = 398

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 16/105 (15%)

Query: 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLET 161
           +LTLC  GD +V  +  Y  ++     +    G+    V            + +   +  
Sbjct: 96  LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAM-- 146

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
           +P  K+V +  P NP+ + +    ++ ++ +    G+ LVVDNT+
Sbjct: 147 RPETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTF 188

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} PDB: 3e6g_A* 3nnp_A* Length = 400

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 30/119 (25%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           A  + V+ L DAG  VV     Y      F      +  G+    V          D   
Sbjct: 93  AATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRR-RTAGLDFSFVDLT-------DPAA 144

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
            +  +  +   K+V +  P NP        +LK      I+ + +  G   VVDNT F 
Sbjct: 145 FKAAI--RADTKMVWIETPTNP--------MLKLVDIAAIAVIARKHGLLTVVDNT-FA 192

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A* Length = 398

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 17/108 (15%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
            + TL   GD V++    Y  ++          GV    V          D   LE  + 
Sbjct: 96  TLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-------DLQALEAAM- 147

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFM 208
             P  +++   +P NP+        +  ++ + +  G+ +VVDNT + 
Sbjct: 148 -TPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNT-YC 190

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 20/123 (16%)

Query: 91  SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-------FQMTGVTHILVGPC 143
              VT GA +A   ++ +L      VVM                   +  G+   LV   
Sbjct: 71  VARVTNGAREAKFAVMHSLAKKDAWVVM-------DENCHYSSYVAAERAGLNIALVPKT 123

Query: 144 SSKTLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200
                    +   +T+E         L  +  P    G       +K+I+ +C      L
Sbjct: 124 DYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPL 180

Query: 201 VVD 203
           +V+
Sbjct: 181 LVN 183

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A* Length = 389

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 27/113 (23%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
             L     GD ++     Y  +   F       G+   L+          D + ++    
Sbjct: 90  STLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTS-------DVEKVKAAW- 141

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
            KP  K+V + +P NP          K      I+ +C   G+ LVVD T F 
Sbjct: 142 -KPNTKMVYLESPANP--------TCKVSDIKGIAVVCHERGARLVVDAT-FT 184

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} PDB: 3qi6_A* Length = 392

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 27/113 (23%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLE 160
            +  +   GD VV+    Y  ++           V +  V          D D +   + 
Sbjct: 97  ALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-------DLDAVRAAI- 148

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
            +PT +L+ V  P NP        LL       I+ L   + + ++VDNT F 
Sbjct: 149 -RPTTRLIWVETPTNP--------LLSIADIAGIAQLGADSSAKVLVDNT-FA 191

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3 Length = 464

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 31/119 (26%)

Query: 101 AFVNIVLTLCDAGDSVVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADW 154
           A ++ V  L   G+ +V     Y       +  +     GV    V            D 
Sbjct: 159 AALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRS--GVVVKRVNTT-------KLDE 209

Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
           +   +   P  KLV + +P NP          +     +IS++  A G+ ++VDN+  M
Sbjct: 210 VAAAI--GPQTKLVWLESPTNP--------RQQISDIRKISEMAHAQGALVLVDNS-IM 257

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3 Length = 386

 Score = 40.2 bits (95), Expect = 8e-04
 Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 27/113 (23%)

Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLE 160
           +       GD +V     Y  SY  F           + V          D   L   L 
Sbjct: 83  VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-------DEQALRAAL- 134

Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLK-----RISDLCKAAGSWLVVDNTYFM 208
               PKLV V +P NP        LL+     +I  L +  G+  VVDNT F+
Sbjct: 135 -AEKPKLVLVESPSNP--------LLRVVDIAKICHLAREVGAVSVVDNT-FL 177

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	398
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
1svv_A	359	Threonine aldolase; structural genomics, structura	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
1z7d_A	433	Ornithine aminotransferase; structural genomics co	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	100.0
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	100.0
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	100.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	100.0
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	100.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	100.0
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	100.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	100.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	100.0
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.98
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.98
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.98
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.98
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.98
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.98
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.98
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.97
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.97
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.97
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.97
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.97
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.97
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.97
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.97
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.97
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.97
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.97
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.97
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.97
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.97
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.97
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.97
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.96
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.96
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.96
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.96
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.96
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.96
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.96
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.96
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.96
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.96
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.95
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.95
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.95
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.92
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.95
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.95
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.95
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.95
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.95
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.94
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.94
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.93
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.93
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.93
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.92
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.92
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.92
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.92
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.92
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.92
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.91
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.91
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.91
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.91
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.89
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.85
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.85
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.81
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.76

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=1e-49  Score=373.82  Aligned_cols=366  Identities=26%  Similarity=0.467  Sum_probs=307.0

Q ss_pred             HhHHhhccCchHHHHHHH----HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~----~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.....+.+.++.+    ....+++.++|+.|.+++++|+.+.+++.+.+... ...|++..|..++|+++++++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~   82 (385)
T 1b5p_A            4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR   82 (385)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence            567777665555544333    33457889999999999888999999998887653 4578777889999999999998


Q ss_pred             hhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l  159 (398)
                      +.+++  ++++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.+
T Consensus        83 ~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  161 (385)
T 1b5p_A           83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI  161 (385)
T ss_dssp             HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred             HHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHHhc
Confidence            87764  57899999999999999999999999999999999999999999999999999 8765 56788999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCC
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~  235 (398)
                      +++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++......  ..+++++++|+||.+|++
T Consensus       162 ~~~--~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  239 (385)
T 1b5p_A          162 TPR--TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT  239 (385)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred             CCC--CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCc
Confidence            865  499999999999999999999999999999999999999999  66654211111  126799999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+|+||++++   +++++.+........++.+.+.+.++..+|+.   ..+++++..+.++++++.+.+.|++++ +.+.
T Consensus       240 G~RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~  315 (385)
T 1b5p_A          240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG-LKAV  315 (385)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBC
T ss_pred             ccceEEEEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCC-Ceec
Confidence            9999999998   78888888776656678889999999889975   456778888999999999999998774 4777


Q ss_pred             cCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      .+++++|+|+.++....+..+++++|+ ++||.+.||..|+.++++|||++ .+++++++++++|.++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARVLG  383 (385)
T ss_dssp             CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred             CCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence            788788999988632246778888887 89999999998877889999999 588899999998877654

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=4.8e-48  Score=363.08  Aligned_cols=371  Identities=26%  Similarity=0.429  Sum_probs=315.3

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      |++++|......+.+.++.+...+.+++++|+.|.+++++++.+.+++.+.+.+. ...|++..+..++++.+++++.+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~   79 (389)
T 1gd9_A            1 MALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ   79 (389)
T ss_dssp             -CHHHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CchhhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHH
Confidence            6688888888888888887777665789999999998888999999999988664 356877778999999999999887


Q ss_pred             cC--CCCCc-EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890           85 NK--LYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (398)
Q Consensus        85 ~~--~~~~~-v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~  160 (398)
                      +|  +++++ |++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.++
T Consensus        80 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~  158 (389)
T 1gd9_A           80 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVT  158 (389)
T ss_dssp             HCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCC
T ss_pred             hCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCCccCCCCCHHHHHHhcC
Confidence            77  46788 9999999999999999999999999999999999999999999999999 7764 357789999999998


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccccc----CCcEEEEcccccccC
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVE----GDHVVNLFSFSKAYG  233 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~----~~~~i~~~s~sK~~~  233 (398)
                      ++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++. ......    .+++++++|+||.+|
T Consensus       159 ~~--~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  236 (389)
T 1gd9_A          159 DK--TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA  236 (389)
T ss_dssp             TT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred             cC--ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence            64  589999999999999999999999999999999999999999  555543 111111    357899999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      ++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+....  ++++..+.++++++.+.+.|++++ +.+
T Consensus       237 ~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~  312 (389)
T 1gd9_A          237 MTGWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-LPT  312 (389)
T ss_dssp             CGGGCCEEEECC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred             CcccceEEEEEC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcC-Cee
Confidence            999999999998   78989888777666788899999999999986444  678888899999999999998875 466


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..+.+++++|+.++....+..++.++|++++||.+.+|..|+  .++++||+++. +++++++++++|.+++++.
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~  386 (389)
T 1gd9_A          313 VKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER  386 (389)
T ss_dssp             CCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence            667778889988864223677888888668999999998876  36799999997 8999999999999988763

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=3.4e-48  Score=363.96  Aligned_cols=372  Identities=24%  Similarity=0.438  Sum_probs=311.3

Q ss_pred             hhHhHHhhccCch----HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |++++|+.....+    ......+...+|+++++|+.|.++++.|+.+.+++.+.+.+. ...|++..+..++++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~   79 (388)
T 1j32_A            1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK   79 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             CchhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            4456666644332    333444445578899999999998888999999999888653 45787778899999999999


Q ss_pred             HhhhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890           81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~  157 (398)
                      +.+.+++  ++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.|++
T Consensus        80 ~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~  158 (388)
T 1j32_A           80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ  158 (388)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred             HHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHH
Confidence            9887764  57899999999999999999999999999999999999999999999999999 7764 357789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---cccc---CCcEEEEcccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVE---GDHVVNLFSFS  229 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~~---~~~~i~~~s~s  229 (398)
                      .++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.+.   ....   .++++++.|+|
T Consensus       159 ~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s  236 (388)
T 1j32_A          159 AITPK--TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA  236 (388)
T ss_dssp             HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred             hcCcC--ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence            99865  499999999999999999999999999999999999999999  66654322   1111   34689999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.+|++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...+++++..+.+.++++.+.+.|++++++
T Consensus       237 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~  313 (388)
T 1j32_A          237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL  313 (388)
T ss_dssp             TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             hccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            9999999999999998   7888888877666677888999998888998656788888999999999999999988666


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+..+.+++++|+.++....+..++..+|++++||.+.+|..|+.++++|++++. +++++++++++|.++++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            7777777888888876322357788888875689999999888778999999984 8999999999999988764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1e-47  Score=361.69  Aligned_cols=360  Identities=22%  Similarity=0.315  Sum_probs=307.8

Q ss_pred             hHHhhccCchHHHHHHHHH-----HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            8 AKRALETEMPIMVQIQELV-----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~-----~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      ++++.....+.+..+.+..     ++|+++++|+.|.+++++||.+.+++.+.+..  ...|++..+..++++++++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~   80 (396)
T 3jtx_A            3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK   80 (396)
T ss_dssp             HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence            3445555555555555443     34789999999999999999999999998763  5779888889999999999999


Q ss_pred             hhcCC---CCC-cEEEecChHHHHHHHHHHhccCC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChH
Q 015890           83 QENKL---YKS-SVMVTAGANQAFVNIVLTLCDAG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD  153 (398)
Q Consensus        83 ~~~~~---~~~-~v~~~~g~t~a~~~~~~~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e  153 (398)
                      +.++.   +++ +|++|+|++++++.++.+++++|     |+|+++.|+|+++...++..|.+++.+ +.+++++.+|++
T Consensus        81 ~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~g~~~d~~  159 (396)
T 3jtx_A           81 RRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWR  159 (396)
T ss_dssp             HHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCTTTCCCCGG
T ss_pred             HhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEe-ecCCCCCccCHH
Confidence            88874   588 99999999999999999999986     799999999999999999999999999 887778889999


Q ss_pred             HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc--------cCCcE
Q 015890          154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV--------EGDHV  222 (398)
Q Consensus       154 ~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~--------~~~~~  222 (398)
                      .|++.++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++ .+....        ..+++
T Consensus       160 ~l~~~~~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (396)
T 3jtx_A          160 SISEEVWKR--TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKL  237 (396)
T ss_dssp             GSCHHHHHT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTE
T ss_pred             HHHHhhccC--cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcE
Confidence            999999875  499999999999999999999999999999999999999999  66655 222211        26789


Q ss_pred             EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      +++.|+||.++++|+|+||++.+   +++++.+.......+++.+.+.+.++.++++. .+++.+.++.+.++++.+.+.
T Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~  313 (396)
T 3jtx_A          238 LMFTSLSKRSNVPGLRSGFVAGD---AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPI  313 (396)
T ss_dssp             EEEEESTTTSSCGGGCCEEEEEC---HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998   88999888777666788999999999999986 678889999999999999999


Q ss_pred             hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--------CCeEEEEecCCCHHHHHHHH
Q 015890          303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA  374 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~  374 (398)
                      |++.  ..+..+.+++|+|+.++.  .+..+++.+|++++||.+.||+.|+.        .+++||+++. +++++++++
T Consensus       314 l~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l  388 (396)
T 3jtx_A          314 LQQV--FDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAA  388 (396)
T ss_dssp             HTTT--SCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHH
T ss_pred             HHhc--CCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHH
Confidence            9876  245567778999999975  36788888888788999999998753        4799999997 899999999


Q ss_pred             HHHHHHH
Q 015890          375 DRLRRGL  381 (398)
Q Consensus       375 ~~l~~~~  381 (398)
                      ++|.+++
T Consensus       389 ~~l~~~l  395 (396)
T 3jtx_A          389 EDIVSLY  395 (396)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9998764

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=9.4e-49  Score=369.50  Aligned_cols=371  Identities=20%  Similarity=0.302  Sum_probs=304.8

Q ss_pred             chhhHhHHhhccCchHHHHHHHHHH--cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            3 SYAKLAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      +.|+ ++|+.......+..+.+...  .|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++.++++
T Consensus        19 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~   97 (404)
T 2o1b_A           19 SHMI-SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDF   97 (404)
T ss_dssp             ---C-CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHH
T ss_pred             chhh-hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence            3454 67777655555555544443  46779999999998888999999999987553245687767899999999999


Q ss_pred             HhhhcCCC--C-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890           81 LNQENKLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~~~--~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                      +.+.++++  + ++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++++.+|++.|++
T Consensus        98 ~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~  176 (404)
T 2o1b_A           98 YQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDS  176 (404)
T ss_dssp             HHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEE-ECCTTTCCCCGGGSCH
T ss_pred             HHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCcccCcCCHHHHHH
Confidence            98877754  4 799999999999999999999999999999999999999999999999999 7776677789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKA  231 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~  231 (398)
                      .++++  +++|++++|+||||.++|.+++++|+++|+++|+++|+||+|  +.+++.......    .+++++++|+||.
T Consensus       177 ~l~~~--~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~  254 (404)
T 2o1b_A          177 QIIDK--TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKG  254 (404)
T ss_dssp             HHHHH--EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTT
T ss_pred             hhccC--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchh
Confidence            98754  499999999999999999999999999999999999999999  655443222221    2578999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      +|++|+|+||++++   +++++.+.......+++.+.+.+.++.++|+...+++++..+.++++++.+.+.|++++ +.+
T Consensus       255 ~g~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~  330 (404)
T 2o1b_A          255 YNMSGFRVGFAVGN---KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPF  330 (404)
T ss_dssp             TTCGGGCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCE
T ss_pred             ccCchhheEeEecC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-Cee
Confidence            99899999999998   88888888776666678899999999999986567788888899999999999998875 467


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..+.+++|+|+.++.. .+..+++++|++++||.+.+|..|+.  ++++||+++. +++++++++++|.+++++
T Consensus       331 ~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~  402 (404)
T 2o1b_A          331 VHAKGGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYL  402 (404)
T ss_dssp             ECCCBSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGG
T ss_pred             cCCCcceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence            7777788899999753 35678888887678999999988863  6899999997 788999999999887654

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=8e-48  Score=361.82  Aligned_cols=356  Identities=24%  Similarity=0.352  Sum_probs=299.6

Q ss_pred             HHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEec
Q 015890           19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTA   96 (398)
Q Consensus        19 ~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~   96 (398)
                      +....+...+|+++++|+.|.+++++||++.+++.+.+.+. ...|++..+..++|+.+++++.+.++  +++++|++|+
T Consensus        20 ~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~   98 (391)
T 3h14_A           20 MEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP   98 (391)
T ss_dssp             HHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred             HHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence            34445555688999999999999999999999999988764 46788888899999999999988776  5678999999


Q ss_pred             ChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890           97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus        97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      |++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+ ++.+|++++++.   +  +++|++++|+|
T Consensus        99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~---~--~~~v~i~~p~n  172 (391)
T 3h14_A           99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDL-PTAPENRLQPVPADFAGL---D--LAGLMVASPAN  172 (391)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCGGGTTSCCHHHHTTS---C--CSEEEEESSCT
T ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHhc---C--CeEEEECCCCC
Confidence            99999999999999999999999999999999999999999999 77654 477899999887   3  59999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      |||.+++.+++++|+++|+++|+++|+||+|  +.+++...... ..+++++++|+||.+|++|+|+||++++   ++++
T Consensus       173 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~  249 (391)
T 3h14_A          173 PTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP---EDQV  249 (391)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC---GGGH
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC---HHHH
Confidence            9999999999999999999999999999999  66655433322 2467899999999999999999999998   6788


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +.+........++.+.+.+.++.++++ ..+++++..+.+.++++.+.+.|++++...+..+.+++++|+.++....+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (391)
T 3h14_A          250 RVVERIAQNMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSR  328 (391)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHH
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHH
Confidence            888877777778889999999988888 4678889999999999999999988877555677778999999876444788


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++.++++++||.+.||+.|+.   ++++|++++. +++++++++++|.+++++...
T Consensus       329 ~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~~  384 (391)
T 3h14_A          329 AFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARGE  384 (391)
T ss_dssp             HHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhcc
Confidence            8999888667999999998865   6799999997 889999999999999887554

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-47  Score=363.32  Aligned_cols=373  Identities=21%  Similarity=0.344  Sum_probs=297.4

Q ss_pred             hhHhHHhhccCchHHHHHH----HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      |.+++++.....+.+....    +...+|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++.++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~   87 (412)
T 2x5d_A            8 ARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW   87 (412)
T ss_dssp             -------------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred             cchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence            4566666654444444332    234568899999999998888999999999988654356787788899999999999


Q ss_pred             HhhhcCC--CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHH
Q 015890           81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE  156 (398)
Q Consensus        81 l~~~~~~--~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~  156 (398)
                      +.+.+|.  ++ ++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|+
T Consensus        88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~  166 (412)
T 2x5d_A           88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV-PLVPGIDFFNELERAI  166 (412)
T ss_dssp             HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEE-ECSTTSCHHHHHHHHH
T ss_pred             HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHH
Confidence            9887764  56 699999999999999999999999999999999999999999999999998 77655 6667899999


Q ss_pred             HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---ccccc--CCcEEEEcccc
Q 015890          157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---HCCVE--GDHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~~~~~--~~~~i~~~s~s  229 (398)
                      +.++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++..   .....  .+++++++|+|
T Consensus       167 ~~i~~~--~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s  244 (412)
T 2x5d_A          167 RESIPK--PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS  244 (412)
T ss_dssp             HTEESC--CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC
T ss_pred             HhcccC--ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCc
Confidence            999865  489999999999999999999999999999999999999999  5554421   11111  36789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.+|++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...+++++..+.++++++.+.+.|++++ +
T Consensus       245 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~  320 (412)
T 2x5d_A          245 KSYNMAGWRIGFMVGN---PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W  320 (412)
T ss_dssp             -CCSCTTSCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred             cccCCcccceEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence            9999999999999998   88888888776666788899999999999987667888889999999999999998774 3


Q ss_pred             ccccCCccEEEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          310 AVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .+..+.+++|+|+.++...  .+..+++.+|++++||.+.+|..|+  .++++||+++. +++++++++++|.++++++.
T Consensus       321 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~  399 (412)
T 2x5d_A          321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG  399 (412)
T ss_dssp             CCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence            6667777889999997432  1567888888766899999998885  36799999997 88999999999999998754

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=2.3e-47  Score=358.12  Aligned_cols=368  Identities=24%  Similarity=0.354  Sum_probs=308.4

Q ss_pred             cchhhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015890            2 GSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL   81 (398)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l   81 (398)
                      |..|..++|+.....+.++.+.+.... .++++|+.|.+++++++.+.+++.+.+... ...|++..+..++++++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l   80 (386)
T 1u08_A            3 NNPLIPQSKLPQLGTTIFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKT   80 (386)
T ss_dssp             --CCCCCCSCCCCCCCHHHHHHHHHHH-TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHH
T ss_pred             CCCCccchhhhcCCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHH
Confidence            444555777776666777777666544 689999999998888999999999988653 467877778999999999999


Q ss_pred             hhhcC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHh
Q 015890           82 NQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT  158 (398)
Q Consensus        82 ~~~~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~  158 (398)
                      .+.+|  ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+++.+|++.|++.
T Consensus        81 ~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~  159 (386)
T 1u08_A           81 ERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAAL  159 (386)
T ss_dssp             HHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-ecCcccCcCCHHHHHHh
Confidence            88766  4577 99999999999999999999999999999999999999999999999999 77655567899999999


Q ss_pred             hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEEcccccc
Q 015890          159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNLFSFSKA  231 (398)
Q Consensus       159 l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~~s~sK~  231 (398)
                      ++++  +++|++++|+||||.++|.+++++|+++|+++|+++|+||+|  +.+++...   ...  ..++++++.|+||.
T Consensus       160 l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~  237 (386)
T 1u08_A          160 LSER--TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKT  237 (386)
T ss_dssp             CCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHH
T ss_pred             hccc--CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhh
Confidence            9754  599999999999999999999999999999999999999999  66655321   111  24678999999999


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV  311 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  311 (398)
                      +|++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...+++++..++++++++.+.+.|++.+. .+
T Consensus       238 ~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~  313 (386)
T 1u08_A          238 YHMTGWKVGYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRL-EI  313 (386)
T ss_dssp             TTCGGGCCEEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSC-EE
T ss_pred             cCCcccceEEEEcC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCC-ee
Confidence            99899999999998   788888877665556788888999999999865677888899999999999999998754 67


Q ss_pred             ccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ..+.+++++|++++... .+..++.+++++++||.+.||..|.    .++++||+++. +++++++++++|.+
T Consensus       314 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~  385 (386)
T 1u08_A          314 LPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ  385 (386)
T ss_dssp             CCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred             cCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence            77777899999997531 3577888888777899999998774    46799999996 88999999998864

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=3e-47  Score=363.31  Aligned_cols=370  Identities=25%  Similarity=0.397  Sum_probs=309.1

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|......+.++++.+... ++++++|+.|.+...  +++++.+++.+.+.+.  ....|++..|..++|+.+++++.
T Consensus        54 ~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~  132 (448)
T 3aow_A           54 FSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLG  132 (448)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            677777777777888777654 578999999987543  6888999988887642  13578888899999999999997


Q ss_pred             hhcCC-CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-
Q 015890           83 QENKL-YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-  160 (398)
Q Consensus        83 ~~~~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-  160 (398)
                      +.+++ ++++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++  +|++.|++.++ 
T Consensus       133 ~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~L~~~l~~  209 (448)
T 3aow_A          133 KRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEG--MKVEILEEKLKE  209 (448)
T ss_dssp             HHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHH
T ss_pred             HhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHHhh
Confidence            77777 78899999999999999999999999999999999999999999999999998 776654  79999999997 


Q ss_pred             ---cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---cc-ccCCcEEEEccccc
Q 015890          161 ---TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CC-VEGDHVVNLFSFSK  230 (398)
Q Consensus       161 ---~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~-~~~~~~i~~~s~sK  230 (398)
                         +..++++|+ +++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++...   .. ...++++++.|+||
T Consensus       210 ~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK  289 (448)
T 3aow_A          210 LKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK  289 (448)
T ss_dssp             HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTT
T ss_pred             hhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchh
Confidence               522368875 6799999999999999999999999999999999999  66654321   11 12457899999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhcc-CC
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP-LG  307 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~-~~  307 (398)
                      .++ +|+|+||++++   +++++.+........++.+.+.|.++.++|+..  .+++++..+.++++++.+.+.|++ .+
T Consensus       290 ~~~-~GlriG~v~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  365 (448)
T 3aow_A          290 ILA-PGFRIGWMVGD---PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP  365 (448)
T ss_dssp             TTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hcc-ccccEEEEEeC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999 99999999999   889988877766556778999999999999864  466788888888999999999986 45


Q ss_pred             -CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          308 -EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       308 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                       ++.+..|.+++|+|++++.. .+..+++.+++ ++||.+.||..|.    .++++|++++..+++++++++++|.++++
T Consensus       366 ~g~~~~~p~~g~~~~v~~~~~-~~~~~l~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~  443 (448)
T 3aow_A          366 EGVKWTKPEGGMFIWVTLPDG-IDSKKMLERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK  443 (448)
T ss_dssp             TTCEECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred             CCeEEeCCCccEEEEEEcCCC-CCHHHHHHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence             45777778899999999753 36778888887 5699999998874    35799999997678999999999999998


Q ss_pred             HHhc
Q 015890          383 ELVK  386 (398)
Q Consensus       383 ~~~~  386 (398)
                      +..+
T Consensus       444 ~~~~  447 (448)
T 3aow_A          444 EELK  447 (448)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            7654

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.3e-47  Score=364.01  Aligned_cols=370  Identities=22%  Similarity=0.350  Sum_probs=315.4

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      +.+++|+.....+.++++.+... +.++++|+.|.+++++||.+.+++.+.+.... ...|++..+..++++.+++++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~   82 (422)
T 3fvs_A            4 QLQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGE   82 (422)
T ss_dssp             CCSCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhHHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence            34788888888888888877664 47999999999999999999999999887643 46788888999999999999998


Q ss_pred             hcCC--CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-----------CCCC
Q 015890           84 ENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-----------KTLH  149 (398)
Q Consensus        84 ~~~~--~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~  149 (398)
                      .++.  ++ ++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.           .++.
T Consensus        83 ~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~G~~~~~~~~~  161 (422)
T 3fvs_A           83 LLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQ  161 (422)
T ss_dssp             HHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCCCSSSCCBGGGSB
T ss_pred             hhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEE-ecccccccccccccccCCC
Confidence            7774  45 689999999999999999999999999999999999999999999999988 7654           3467


Q ss_pred             CChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcE
Q 015890          150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHV  222 (398)
Q Consensus       150 ~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~  222 (398)
                      +|++.+++.++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++....   ..  ..+++
T Consensus       162 ~d~~~l~~~~~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~  239 (422)
T 3fvs_A          162 LDPMELAGKFTSR--TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT  239 (422)
T ss_dssp             CCHHHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred             CCHHHHHhhcCCC--ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcE
Confidence            8999999999865  499999999999999999999999999999999999999999  666553221   11  23678


Q ss_pred             EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRN  295 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~  295 (398)
                      +++.|+||.+|++|+|+||++++   +++++.+.......+++.+.+.+.++..+++.       ...++++..+.++++
T Consensus       240 i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  316 (422)
T 3fvs_A          240 LTIGSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC  316 (422)
T ss_dssp             EEEEEHHHHHTCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred             EEEecchhccCCccceEEEEEeC---HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence            99999999999999999999999   78888888777666788899999999998873       356788899999999


Q ss_pred             HHHHHHHhccCCCCccccCCccEEEEeeCCCCC---CC---------hHHHHHHHHHhcCeEEecCCCCC-------CCC
Q 015890          296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD---------DFEVVRWLAHRHGVVVIPGGACG-------CRG  356 (398)
Q Consensus       296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~ll~~~gi~v~~g~~~~-------~~~  356 (398)
                      ++.+.+.|++++. .+..+.+++|+|++++...   .+         ..+++.++++++||.+.||+.|+       ..+
T Consensus       317 ~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~  395 (422)
T 3fvs_A          317 RDHMIRSLQSVGL-KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH  395 (422)
T ss_dssp             HHHHHHHHHTTTC-EEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred             HHHHHHHHHHcCC-eecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence            9999999998854 7777888999999885310   01         55788888878999999999884       368


Q ss_pred             eEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          357 HLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++||+++. +++++++++++|++++++
T Consensus       396 ~iRis~~~-~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          396 YIRFCFVK-DEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             EEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred             eEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence            99999997 999999999999988764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-47  Score=365.47  Aligned_cols=358  Identities=21%  Similarity=0.384  Sum_probs=302.5

Q ss_pred             cCchHHHHHHHHHH--------cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890           14 TEMPIMVQIQELVR--------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus        14 ~~~~~~~~~~~~~~--------~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~   85 (398)
                      ...+.|+.+.+...        .++++++|+.|.+++++|+.+.+++.+++.+.....|++..|..++++++++++.+.+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~  112 (447)
T 3b46_A           33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY  112 (447)
T ss_dssp             CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred             cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence            44567777766652        6789999999999888899999999998875335678888899999999999998877


Q ss_pred             CC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-----------CCCCCh
Q 015890           86 KL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-----------TLHPDA  152 (398)
Q Consensus        86 ~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~d~  152 (398)
                      |.  ++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+           ++.+|+
T Consensus       113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~d~  191 (447)
T 3b46_A          113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYV-PINPPKELDQRNTRGEEWTIDF  191 (447)
T ss_dssp             TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-EEECCGGGGTSCBCSTTSEECH
T ss_pred             CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eCCCccccccccccccCcccCH
Confidence            64  56799999999999999999999999999999999999999999999999988 76543           467899


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cccc---cCCcEEEE
Q 015890          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCV---EGDHVVNL  225 (398)
Q Consensus       153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~---~~~~~i~~  225 (398)
                      +.|++.++++  +++|++++|+||||.+++.+++++|+++|++||+++|+||+|  +.+++..  ....   ..++++++
T Consensus       192 ~~l~~~l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i  269 (447)
T 3b46_A          192 EQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTV  269 (447)
T ss_dssp             HHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEE
T ss_pred             HHHHHhhccC--CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEE
Confidence            9999999854  599999999999999999999999999999999999999999  6665521  1112   24678999


Q ss_pred             cccccccCCCcceeEEEEc-cCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      .|+||.++++|+|+||+++ +   +++++.+.......+++.+.+.+.++.++|+..  ++++++.++.++++++.+.+.
T Consensus       270 ~S~sK~~~~~G~riG~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~  346 (447)
T 3b46_A          270 GSAGKSFAATGWRIGWVLSLN---AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI  346 (447)
T ss_dssp             EEHHHHTTCTTSCCEEEECSC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCchhcCCcchhhEEEEeCC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999 7   788888877665567788999999999999864  456788889999999999999


Q ss_pred             hccCCCCccccCCccEEEEeeCCCC--------------CCChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEEE
Q 015890          303 LSPLGEGAVKGGEGAIYLWARLPEK--------------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRIS  361 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~  361 (398)
                      |++++. .+..+.+++|+|++++..              ..+..+++.+|++++||.+.||+.|+.       ++++||+
T Consensus       347 L~~~g~-~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls  425 (447)
T 3b46_A          347 FDELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA  425 (447)
T ss_dssp             HHHHTC-CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEE
T ss_pred             HHHCCC-eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEE
Confidence            988754 667788899999998742              124567888887778999999987753       6899999


Q ss_pred             ecCCCHHHHHHHHHHHHH
Q 015890          362 FGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       362 ~~~~~~~~~~~~~~~l~~  379 (398)
                      ++. +++++++++++|.+
T Consensus       426 ~~~-~~e~l~~~~~~l~~  442 (447)
T 3b46_A          426 VCK-DDAYLENAVERLKL  442 (447)
T ss_dssp             CCS-CHHHHHHHHHHGGG
T ss_pred             EeC-CHHHHHHHHHHHHH
Confidence            996 88999999999876

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=4.3e-47  Score=357.66  Aligned_cols=368  Identities=22%  Similarity=0.371  Sum_probs=299.6

Q ss_pred             hhHhHHhhcc--CchHHHHHHHHHH------cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHH
Q 015890            5 AKLAKRALET--EMPIMVQIQELVR------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPEL   73 (398)
Q Consensus         5 ~~~~~~~~~~--~~~~~~~~~~~~~------~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~   73 (398)
                      |.+++|+...  ..+.++++.+...      +++++++|+.|.++++++|.+.+++.+.+.+..   ...|++..+..++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l   81 (398)
T 3ele_A            2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET   81 (398)
T ss_dssp             CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred             cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence            5567777754  3445555433322      357899999999888889999999999886532   4678888899999


Q ss_pred             HHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCC
Q 015890           74 RDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP  150 (398)
Q Consensus        74 ~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  150 (398)
                      ++++++++.+.++  +++++|++|+|+++++..++.+++++| |+|+++.|+|+++...++..|.+++.+ +.+++++.+
T Consensus        82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~  160 (398)
T 3ele_A           82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEV-PADTEHFQI  160 (398)
T ss_dssp             HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCTTTSSC
T ss_pred             HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCCcCCcC
Confidence            9999999988876  568899999999999999999999999 999999999999999999999999999 887777889


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEeece--eccCCCc--cccccCC
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA------AGSWLVVDNTY--FMYDGRK--HCCVEGD  220 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~------~~~~livDe~~--~~~~~~~--~~~~~~~  220 (398)
                      |+++|++.++++  +++|++++|+||||.+++.+++++|+++|++      +|+++|+||+|  +.+++..  ......+
T Consensus       161 d~~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  238 (398)
T 3ele_A          161 DFDALEERINAH--TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD  238 (398)
T ss_dssp             CHHHHHHTCCTT--EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS
T ss_pred             CHHHHHHHhCcC--CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC
Confidence            999999999865  4999999999999999999999999999999      99999999999  6665532  2223357


Q ss_pred             cEEEEcccccccCCCcceeEEEEccCCcH---HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVE---GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  296 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~---~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  296 (398)
                      ++++++|+||.+|++|+|+||+++++...   .+.+.+...... .+.+.+.+.+.++..+++...     ..+.+++++
T Consensus       239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~  313 (398)
T 3ele_A          239 NTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----DINAYKENR  313 (398)
T ss_dssp             SEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----CHHHHHHHH
T ss_pred             CeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----HHHHHHHHH
Confidence            88999999999999999999999985321   133444333322 245677788888887777532     245667778


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                      +++.+.|++++. .+..+.+++++|+.++..  +..++.+.| .++||.+.+|..|+.++++||+++ .+++++++++++
T Consensus       314 ~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~  388 (398)
T 3ele_A          314 DLLYEGLTRIGY-HCFKPDGAFYMFVKALED--DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPA  388 (398)
T ss_dssp             HHHHHHHHHHTC-CEECCSBSSEEEEECSSS--CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC-eecCCCeeEEEEEEcCCC--CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHH
Confidence            888888877654 677788788899998753  577788766 589999999999988899999998 599999999999


Q ss_pred             HHHHHHHHh
Q 015890          377 LRRGLEELV  385 (398)
Q Consensus       377 l~~~~~~~~  385 (398)
                      |.++++++.
T Consensus       389 l~~~l~~~~  397 (398)
T 3ele_A          389 FEKIYKKYN  397 (398)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhh
Confidence            999998754

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.1e-47  Score=360.09  Aligned_cols=371  Identities=22%  Similarity=0.343  Sum_probs=308.4

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      |++++|+.....+.++.+.+...+ .++++|+.|.++++++|.+.+++.+.+.+. ...|++..+..++++.+++++.+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~   78 (411)
T 2o0r_A            1 MATVSRLRPYATTVFAEMSALATR-IGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRH   78 (411)
T ss_dssp             -CCCGGGGGGSSCHHHHHHHHHHT-TTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CchhhHhHhcCccHHHHHHHHhhc-CCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            556778887777788877766544 679999999998888999999999988763 467877888999999999999887


Q ss_pred             cC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhh
Q 015890           85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTL  159 (398)
Q Consensus        85 ~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l  159 (398)
                      +|  ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+  ++.+|++.|++.+
T Consensus        79 ~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l  157 (411)
T 2o0r_A           79 FGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV-PLVPDGRGFALDADALRRAV  157 (411)
T ss_dssp             HCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHHHC
T ss_pred             cCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEe-eccccccCCCCCHHHHHHhh
Confidence            76  4577 99999999999999999999999999999999999999999999999988 77543  5678999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--c--cCCcEEEEccccccc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--V--EGDHVVNLFSFSKAY  232 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~--~~~~~i~~~s~sK~~  232 (398)
                      +++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ..  .  ..++++++.|+||.+
T Consensus       158 ~~~--~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~  235 (411)
T 2o0r_A          158 TPR--TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF  235 (411)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred             ccC--ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc
Confidence            864  599999999999999999999999999999999999999999  55654321 11  1  145789999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |++|+|+||++++   +++++.+.......+++.+.+.+.++..+|+...+++++..+.+.++++.+.+.|++.+. .+.
T Consensus       236 ~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~  311 (411)
T 2o0r_A          236 NCTGWKIGWACGP---AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVH  311 (411)
T ss_dssp             TCTTTCEEEEECC---HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTC-EEC
T ss_pred             CCccceEEEEeeC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCC-Eec
Confidence            9999999999998   788888877665556777888898888888765677888889999999999999987754 666


Q ss_pred             cCCccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCC-C------------CCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC-G------------CRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~-~------------~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      .+.+++++|+.++.. ..+..+++.+|++++||.+.+|..| .            .++++||+++. +++++++++++|.
T Consensus       312 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~  390 (411)
T 2o0r_A          312 DSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIRRLS  390 (411)
T ss_dssp             CCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHHHHG
T ss_pred             CCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence            777788999998742 1356788888876789999999877 2            24689999986 8899999999998


Q ss_pred             HHHHHHh
Q 015890          379 RGLEELV  385 (398)
Q Consensus       379 ~~~~~~~  385 (398)
                      +++++..
T Consensus       391 ~~~~~~~  397 (411)
T 2o0r_A          391 VLAERPA  397 (411)
T ss_dssp             GGGC---
T ss_pred             HHHhccC
Confidence            8776544

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9.7e-47  Score=352.56  Aligned_cols=343  Identities=22%  Similarity=0.360  Sum_probs=292.9

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CC-cEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS-SVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~-~v~~~~g~t~a~~  103 (398)
                      ..|+++++|+.|.++++++|.+.+++.+.+.+.....|++..+..++++++++++.+.+|++  ++ +|++++|++++++
T Consensus        22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~  101 (376)
T 2dou_A           22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA  101 (376)
T ss_dssp             HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred             ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence            56789999999999888899999999998865435678665678999999999998877764  45 8999999999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      .++.+++++||+|+++.|+|+++...++..|.+++.+ +. ++++.+|++.+++.++++  +++|++++|+||||.+++.
T Consensus       102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~-~~~~~~d~~~l~~~l~~~--~~~v~l~~p~nptG~~~~~  177 (376)
T 2dou_A          102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLI-PL-REDGLADLKAVPEGVWRE--AKVLLLNYPNNPTGAVADW  177 (376)
T ss_dssp             HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEE-CB-CTTSSBCGGGSCHHHHHH--EEEEEECSSCTTTCCCCCH
T ss_pred             HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEe-eC-CCCCCCCHHHHHHhhccC--ceEEEECCCCCCcCccCCH
Confidence            9999999999999999999999999999999999999 77 567778999999998754  4999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +++++|+++|+++|+++|+||+|  +.+++......    ..+++++++|+||.+|++|+|+||++++   +++++.+..
T Consensus       178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~  254 (376)
T 2dou_A          178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS---EEALARLER  254 (376)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC---HHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC---HHHHHHHHH
Confidence            99999999999999999999999  55554222211    2357899999999999899999999998   888888887


Q ss_pred             hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHH
Q 015890          258 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW  337 (398)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (398)
                      .....+++.+.+.+.++.++++...+++++..+.++++++.+.+.|+++  +.+..+.+++|+|++++.. .+..++..+
T Consensus       255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  331 (376)
T 2dou_A          255 VKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEG-VDDLEFGLR  331 (376)
T ss_dssp             HHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTT-CCHHHHHHH
T ss_pred             HHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCC-CCHHHHHHH
Confidence            7666667788999999999998656778888899999999999999887  4666677788999999753 356788888


Q ss_pred             HHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          338 LAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       338 ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      |+ ++||.+.+|..|+.  ++++||+++. +++++++++++|.+++
T Consensus       332 l~-~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          332 LV-ERGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL  375 (376)
T ss_dssp             HH-HTTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred             HH-HCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence            86 56999999988863  6899999996 8899999999998764

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=3.9e-47  Score=355.34  Aligned_cols=347  Identities=15%  Similarity=0.227  Sum_probs=298.1

Q ss_pred             HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHH
Q 015890           24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (398)
Q Consensus        24 ~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a  101 (398)
                      .|..+|++++||+.|.++++++|.+.+++.+.+.+. ...|++ .+ .++++.+++++.+.++  +++++|++++|++++
T Consensus        17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a   93 (377)
T 3fdb_A           17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG   93 (377)
T ss_dssp             HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence            344578999999999999999999999999988764 467877 66 8999999999987776  457899999999999


Q ss_pred             HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      ++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+   +|+++|++.+++++  +++++++|+||||.++
T Consensus        94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~---~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~  167 (377)
T 3fdb_A           94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFI-DATGG---INLHDVEKGFQAGA--RSILLCNPYNPLGMVF  167 (377)
T ss_dssp             HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEE-ECTTS---CCHHHHHHHHHTTC--CEEEEESSBTTTTBCC
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEc-cCCCC---CCHHHHHHHhccCC--CEEEEeCCCCCCCCCC
Confidence            999999999999999999999999999999999999999 77654   79999999998765  8999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCC-Cccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDG-RKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~-~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      +.+++++|+++|+++|+++|+||+|  +.+.+ ......    ..++++++.|+||.+|++|+|+||++.++  +++++.
T Consensus       168 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~  245 (377)
T 3fdb_A          168 APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEH  245 (377)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS--HHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC--HHHHHH
Confidence            9999999999999999999999999  66655 222111    24678999999999999999999988754  788888


Q ss_pred             HHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          255 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       255 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      +.......+++.+.+.+.++.++++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++.... ..+
T Consensus       246 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  324 (377)
T 3fdb_A          246 WQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTI-EGS  324 (377)
T ss_dssp             HHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCC-CSC
T ss_pred             HHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCC-CHH
Confidence            887766566788999999999999876677888999999999999999988 666688888878888999976322 256


Q ss_pred             HHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++..+++++||.+.||..|+.  ++++||+++. +++++++++++|.+++++
T Consensus       325 ~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~  375 (377)
T 3fdb_A          325 PSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSH  375 (377)
T ss_dssp             HHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence            777788677999999998864  6899999996 899999999999988764

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=3.3e-46  Score=350.45  Aligned_cols=361  Identities=27%  Similarity=0.438  Sum_probs=300.3

Q ss_pred             HhHHhhccCchHHHH----HHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQ----IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~----~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.....+.+++    ..+....|+++++|+.|.++++.++.+.+++.+.+... ...|++..+..++++.+++++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~   92 (389)
T 1o4s_A           14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIG   92 (389)
T ss_dssp             CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence            345555444333333    33333467899999999998888999999999988654 3568777789999999999998


Q ss_pred             hhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l  159 (398)
                      +.+|+  ++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++.+
T Consensus        93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l  171 (389)
T 1o4s_A           93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLL  171 (389)
T ss_dssp             HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTC
T ss_pred             HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhc
Confidence            87765  67899999999999999999999999999999999999999999999999999 7765 36778999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--ccc--CCcEEEEcccccccC
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVE--GDHVVNLFSFSKAYG  233 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~--~~~~i~~~s~sK~~~  233 (398)
                      +++  +++|++++|+||||.++|.+++++|+++|+++|+++|+||+|  +.+++....  ...  .+++++++|+||.+|
T Consensus       172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~  249 (389)
T 1o4s_A          172 VGK--TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS  249 (389)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred             ccC--ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC
Confidence            865  489999999999999999999999999999999999999999  555442111  111  467899999999999


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      ++|+|+||++++   +++++.+........++.+.+.+.++..+|+..   +++..+.+.++++.+.+.|++++ +.+..
T Consensus       250 ~~G~r~G~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~l~~~L~~~g-~~~~~  322 (389)
T 1o4s_A          250 MTGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMG-VKFVE  322 (389)
T ss_dssp             CGGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTT-CCCCC
T ss_pred             CcccceEEEEeC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-Ceeec
Confidence            999999999998   788888877766556778889999998998764   57777888888999999998874 46666


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      +.+++++|+.++   .+..++.++|++++||.+.+|..|+.++++|++++. +++++++++++|.++++
T Consensus       323 ~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          323 PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN  387 (389)
T ss_dssp             CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence            777888998886   357788888866889999999888777899999996 89999999999988764

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=9.9e-47  Score=356.23  Aligned_cols=348  Identities=22%  Similarity=0.318  Sum_probs=300.4

Q ss_pred             CeEEcCCccCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--C-CcEEEecChHHHHHHHH
Q 015890           31 NAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMVTAGANQAFVNIV  106 (398)
Q Consensus        31 ~~~~l~~g~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~-~~v~~~~g~t~a~~~~~  106 (398)
                      .++||+.|++. ++++|.+++++.+.+.+.....|++..+..++++.+++++.+.++.+  + ++|++++|+++++..++
T Consensus        40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~  119 (407)
T 3nra_A           40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV  119 (407)
T ss_dssp             CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred             ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence            48999998755 78899999999998875434568888899999999999999888764  3 79999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-----CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      .+++++||+|+++.|+|+++...++..|.+++.+ +.+     ++++.+|++.|++.++++  +++|++++|+||||.++
T Consensus       120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAFKAG--ARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EBCCCSSCCSSCCBCHHHHHHHHHTT--CCEEEEESSCTTTCCCC
T ss_pred             HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEe-ecccccccCcCCCcCHHHHHHHHhhC--CcEEEEcCCCCCCCccc
Confidence            9999999999999999999999999999999998 763     245678999999999875  48999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      +.+++++|+++|++||+++|+||+|  +.+++.....      ...++++++.|+||.+|++|+|+||++++   +++++
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~  273 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS---RAIIA  273 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC---HHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC---HHHHH
Confidence            9999999999999999999999999  5665533222      22567899999999999999999999998   88999


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      .+........++.+.+.+.++..+++...+++++..++++++++++.+.|++++++.+..+.+++++|+.++....+..+
T Consensus       274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (407)
T 3nra_A          274 RMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAE  353 (407)
T ss_dssp             HHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred             HHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHH
Confidence            88877776777888888988888887655778888899999999999999988766777788789999999864457788


Q ss_pred             HHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          334 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +...|++++||.+.+|..|+  .++++||+++. +++++++++++|.++++++.
T Consensus       354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVERYR  406 (407)
T ss_dssp             HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence            88888767899999998886  46899999997 89999999999999998754

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-46  Score=355.30  Aligned_cols=370  Identities=26%  Similarity=0.389  Sum_probs=304.9

Q ss_pred             HhHHhhccCchHHH---HHHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            7 LAKRALETEMPIMV---QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         7 ~~~~~~~~~~~~~~---~~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      +++|+.....+...   ...+...+|+++++|+.|.+   +++.++.+.+++.+.+.+. ...|++..+..++++.++++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~   90 (406)
T 1xi9_A           12 ASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVER   90 (406)
T ss_dssp             CCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             HHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence            46666654444333   34455667899999999998   7788899999999888654 34687777889999999999


Q ss_pred             HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH
Q 015890           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~  157 (398)
                      +.+.++  +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+|++.|++
T Consensus        91 l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~  169 (406)
T 1xi9_A           91 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRK  169 (406)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHHHH
T ss_pred             HHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCCCcCCcCCHHHHHH
Confidence            988765  457899999999999999999999999999999999999999999999999988 7664 467789999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCc-EEEEccccccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDH-VVNLFSFSKAY  232 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~-~i~~~s~sK~~  232 (398)
                      .++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++......  ..++ +++++|+||.+
T Consensus       170 ~l~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (406)
T 1xi9_A          170 KITDR--TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY  247 (406)
T ss_dssp             HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT
T ss_pred             hhCcC--ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc
Confidence            99865  599999999999999999999999999999999999999999  55533222111  1466 89999999999


Q ss_pred             CCCcceeEEEE--ccCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          233 GMMGWRVGYIA--YPSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       233 ~~~G~r~G~i~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      |++|+|+||++  .+   +    ++++.+....... ++.+.+.+.++.++|+...+++++..+.+.++++.+.+.|+++
T Consensus       248 ~~~G~r~G~~~~~~~---~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  323 (406)
T 1xi9_A          248 FATGWRLGYMYFVDP---ENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI  323 (406)
T ss_dssp             CCGGGCCEEEEEECT---TCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCccEEEEEEEecC---chhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            98999999999  77   6    8888887666544 7788899999999996555667888899999999999999888


Q ss_pred             CCCccccCCccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++.+..+.+++++|+.++.. ..+..+++++|++++||.+.+|..|+.  ++++||+++ .+++++++++++|.+++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~l~~  402 (406)
T 1xi9_A          324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKFMKE  402 (406)
T ss_dssp             TTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence            655666777788888887641 235778888887688999999988864  789999999 6899999999999999887


Q ss_pred             Hh
Q 015890          384 LV  385 (398)
Q Consensus       384 ~~  385 (398)
                      +.
T Consensus       403 ~~  404 (406)
T 1xi9_A          403 RL  404 (406)
T ss_dssp             C-
T ss_pred             Hh
Confidence            54

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=1.7e-46  Score=357.12  Aligned_cols=366  Identities=22%  Similarity=0.363  Sum_probs=306.1

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      +++|+.......+..+.+... ..++++|+.|.+++++++.+.+++.+.+...  ....|++..+..++++++++++.+.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~   93 (429)
T 1yiz_A           15 LPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQL   93 (429)
T ss_dssp             SSSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHH
T ss_pred             hhHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHH
Confidence            456666666666766665543 4689999999998888999999999988652  2457877778999999999999887


Q ss_pred             cC--CCCC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC---------CCCCCh
Q 015890           85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDA  152 (398)
Q Consensus        85 ~~--~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~  152 (398)
                      +|  ++++ +|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.+         ++.+|+
T Consensus        94 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~  172 (429)
T 1yiz_A           94 VDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVLDN  172 (429)
T ss_dssp             HTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCSSSSEEGGGCBCCH
T ss_pred             hCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCcccccccccccCcccCH
Confidence            76  5677 99999999999999999999999999999999999999999999999988 77654         467899


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc---ccc--cCCcEEEE
Q 015890          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH---CCV--EGDHVVNL  225 (398)
Q Consensus       153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~--~~~~~i~~  225 (398)
                      +.|++.++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.+.   ...  ..++++++
T Consensus       173 ~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~  250 (429)
T 1yiz_A          173 NELEALFNEK--TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI  250 (429)
T ss_dssp             HHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred             HHHHHHhccC--ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence            9999999754  599999999999999999999999999999999999999999  66654321   111  24678999


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-----C--chHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----G--PEWVTERVKDLVRNREI  298 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~--~~~~~~~~~~~~~~~~~  298 (398)
                      .|+||.+|++|+|+||++++   +++++.+.......+++.+.+.+.++.++|+.     .  .+++++..+.++++++.
T Consensus       251 ~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (429)
T 1yiz_A          251 GSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY  327 (429)
T ss_dssp             EEHHHHHTCGGGCCEEEESC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred             ecchhccCCCCcceEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence            99999999899999999998   78888887776666788899999999999886     5  57788888999999999


Q ss_pred             HHHHhccCCCCccccCCccEEEEeeCCCCC-----------CChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEE
Q 015890          299 IREALSPLGEGAVKGGEGAIYLWARLPEKH-----------LDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRI  360 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi  360 (398)
                      +.+.|++.+. .+..+.+++|+|++++...           .+..+++.+|++++||.+.||..|..       ++++||
T Consensus       328 l~~~L~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi  406 (429)
T 1yiz_A          328 MASFLAEVGM-NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY  406 (429)
T ss_dssp             HHHHHHHHTC-EEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred             HHHHHHhCCC-cccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence            9999987754 6666777899999987531           24567788787689999999987752       679999


Q ss_pred             EecCCCHHHHHHHHHHHHHHH
Q 015890          361 SFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       361 ~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      +++. +++++++++++|.+++
T Consensus       407 s~~~-~~e~i~~~l~~l~~~l  426 (429)
T 1yiz_A          407 CFFK-KDENLQKAAEILRKWK  426 (429)
T ss_dssp             ECCS-CHHHHHHHHHHHHHHS
T ss_pred             EecC-CHHHHHHHHHHHHHhc
Confidence            9996 8999999999998765

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=2.5e-46  Score=351.49  Aligned_cols=352  Identities=18%  Similarity=0.234  Sum_probs=299.2

Q ss_pred             HHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHH
Q 015890           25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF  102 (398)
Q Consensus        25 ~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~  102 (398)
                      |...|+++++|+.|.+++++||.+.+++.+.+.+. ...|++.  ..++++.+++++.+.++  +++++|++++|+++++
T Consensus        22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~   98 (391)
T 3dzz_A           22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI   98 (391)
T ss_dssp             TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred             eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence            34567899999999999999999999999988764 4566554  68999999999999887  6788999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      +.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+  +..+.+|++.|++.++... +++|++++|+||||.+
T Consensus        99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~-~~~v~i~~p~nptG~~  176 (391)
T 3dzz_A           99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS-DLIYENSKYSVNWADLEEKLATPS-VRMMVFCNPHNPIGYA  176 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTSTT-EEEEEEESSBTTTTBC
T ss_pred             HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEe-eeeecCCceeecHHHHHHHHhccC-ceEEEEECCCCCCCcc
Confidence            99999999999999999999999999999999999998 774  3345689999999998322 5999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---ccc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      ++.+++++|+++|+++|+++|+||+|  +.+.+....   ...   .++++++.|+||.+|++|+|+||+++++  ++++
T Consensus       177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~  254 (391)
T 3dzz_A          177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN--PDLR  254 (391)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS--HHHH
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC--HHHH
Confidence            99999999999999999999999999  666543221   111   4578999999999999999999999975  6788


Q ss_pred             HHHHHhhc-cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCC
Q 015890          253 TQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLD  330 (398)
Q Consensus       253 ~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      +.+..... ...++.+.+.+.++..+++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++....+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (391)
T 3dzz_A          255 ARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMN  334 (391)
T ss_dssp             HHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSC
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCC
Confidence            88776643 234678889999999888875677888999999999999999988 7777888888888889998754346


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..++..+|++++||.+.+|..|+.  ++++|++++. +++++++++++|.++++++
T Consensus       335 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          335 AEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             HHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence            788888886689999999998865  4899999995 8999999999999998764

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=3.2e-46  Score=349.72  Aligned_cols=360  Identities=26%  Similarity=0.388  Sum_probs=296.5

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      |++++|+.....+.++.+.+.... +++++|+.|.+++++++.+.+++.+.+.+  ...|++..+..++++.+++++   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~---   74 (381)
T 1v2d_A            1 MRLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF---   74 (381)
T ss_dssp             CCCCGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred             CchhhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc---
Confidence            456777777666667776666544 67999999999888899999999998865  456877778999999999996   


Q ss_pred             cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccC
Q 015890           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK  162 (398)
Q Consensus        85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~  162 (398)
                       +.++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+  .+++.+|++.|++.++++
T Consensus        75 -~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~  152 (381)
T 1v2d_A           75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR  152 (381)
T ss_dssp             -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred             -CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCCCCccCCcCHHHHHHhcCcC
Confidence             6777889999999999999999999999999999999999999999999999998 776  344678999999999765


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-cccc--cCCcEEEEcccccccCCCcc
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-HCCV--EGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~~~~--~~~~~i~~~s~sK~~~~~G~  237 (398)
                        +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+ +.. ....  ..++++++.|+||.+|++|+
T Consensus       153 --~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~  229 (381)
T 1v2d_A          153 --TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGY  229 (381)
T ss_dssp             --EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGG
T ss_pred             --CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCccc
Confidence              599999999999999999999999999999999999999999  544 321 1111  35688999999999999999


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  315 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  315 (398)
                      |+||++++   +++++.+.......+++.+.+.+.++..+|+..  .+++++..++++++++++.+.|++.+. .+..+.
T Consensus       230 r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~  305 (381)
T 1v2d_A          230 RVGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL-RVYVPE  305 (381)
T ss_dssp             CCEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTC-CEECCS
T ss_pred             ceEEEEeC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCC-EecCCC
Confidence            99999998   677777766655556788899999988888754  467788889999999999999988654 677777


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++|+.++..  +    +.++++++||.+.+|..|..    ++++||+++. +++++++++++|.+++++..+
T Consensus       306 ~~~~~~~~~~~~--~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~  373 (381)
T 1v2d_A          306 GTYFLMAELPGW--D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE  373 (381)
T ss_dssp             BSSEEEEECTTC--C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred             cceEEEEecChH--h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence            788999998753  2    44566789999999988753    6799999997 899999999999999877654

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=1.3e-45  Score=344.10  Aligned_cols=352  Identities=24%  Similarity=0.404  Sum_probs=293.6

Q ss_pred             hHHhhccCchHHHHHHHH----HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            8 AKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~----~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      ++|+.....+.++++.+.    ...|+++++|+.|.+++++|+.+.+++.+.+.+. ...|++..+..++++.+++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~   81 (370)
T 2z61_A            3 SKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD   81 (370)
T ss_dssp             CHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence            455555444444443333    3357899999999998888999999999988654 45787778899999999999988


Q ss_pred             hcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890           84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus        84 ~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      .++  +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +       +|++.|++.+++
T Consensus        82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~-------~d~~~l~~~l~~  153 (370)
T 2z61_A           82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFC-D-------FTVESLEEALSD  153 (370)
T ss_dssp             HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-C-------SSHHHHHHHCCS
T ss_pred             HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-C-------CCHHHHHHhccc
Confidence            776  567899999999999999999999999999999999999999999999999988 5       589999999986


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCC
Q 015890          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~  235 (398)
                      +  +++|++++|+||||.+++.+    |.++|+++|+++|+||+|  +.+++......    ..+++++++|+||.+|++
T Consensus       154 ~--~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~  227 (370)
T 2z61_A          154 K--TKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMT  227 (370)
T ss_dssp             S--EEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred             C--ceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCc
Confidence            4  58999999999999999954    999999999999999999  55554322221    246789999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      |+|+||++++   +++++.+........++.+.+.+.++.++|+. ...++++..+.++++++.+.+.|++++ +.+..+
T Consensus       228 G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~  303 (370)
T 2z61_A          228 GWRIGYVISN---DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG-WEVNNP  303 (370)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCCCC
T ss_pred             cceEEEEEEC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CeecCC
Confidence            9999999999   78888887776666678899999999888875 456778888899999999999998874 466677


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      .+++++|+.++.   +..++..+|++++||.+.+|..|+.  ++++|++++ .+++++++++++|.++++
T Consensus       304 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          304 IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred             CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence            778889988875   5778888886678999999988863  689999999 489999999999988764

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=3.4e-46  Score=352.89  Aligned_cols=362  Identities=22%  Similarity=0.352  Sum_probs=304.9

Q ss_pred             HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-
Q 015890            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-   87 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-   87 (398)
                      +|+...+.+.++++.+.. .+.++++|+.|.+++++|+.+.+++.+.+.+.....|++..+..++++.+++++.+.++. 
T Consensus         3 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~   81 (410)
T 3e2y_A            3 KRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQ   81 (410)
T ss_dssp             GGGTTCCCCHHHHTTTTT-TSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSC
T ss_pred             hhhccCCccHHHHHHHHh-cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCC
Confidence            455566667777776543 457899999999999999999999999987654567888888999999999999887764 


Q ss_pred             -CC-CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC----------CCCCCChHHH
Q 015890           88 -YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS----------KTLHPDADWL  155 (398)
Q Consensus        88 -~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~d~e~l  155 (398)
                       ++ ++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+.          .++.+|++++
T Consensus        82 ~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~d~~~l  160 (410)
T 3e2y_A           82 IDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPREL  160 (410)
T ss_dssp             CCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECCCCSSCCBGGGEECCHHHH
T ss_pred             CCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-eccccccccccccccCCcCCHHHH
Confidence             46 799999999999999999999999999999999999999999999999888 6542          3456899999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc--cCCcEEEEccc
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV--EGDHVVNLFSF  228 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~--~~~~~i~~~s~  228 (398)
                      ++.++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++....   ..  ..++++++.|+
T Consensus       161 ~~~~~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  238 (410)
T 3e2y_A          161 ESKFSSK--TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSA  238 (410)
T ss_dssp             HTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEH
T ss_pred             HhhcCCC--ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecc
Confidence            9999765  599999999999999999999999999999999999999999  666553221   11  23678999999


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHHHHHHHH
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l~~  301 (398)
                      ||.+|++|+|+||++++   +++++.+.......+++.+.+.+.++..+++.       ...++++..+.++++++.+.+
T Consensus       239 sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (410)
T 3e2y_A          239 GKTFSVTGWKLGWSIGP---AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVR  315 (410)
T ss_dssp             HHHSSCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCCCceEEEEEEC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999   78888888777766788899999999998862       346788889999999999999


Q ss_pred             HhccCCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCC-------CCeEEEEecC
Q 015890          302 ALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFGG  364 (398)
Q Consensus       302 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~  364 (398)
                      .|++++. .+..+.+++|+|+++.....          +..+++.++++++||.+.||+.|+.       .+++||+++.
T Consensus       316 ~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~  394 (410)
T 3e2y_A          316 LLNSVGL-KPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK  394 (410)
T ss_dssp             HHHTTTC-EEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC
T ss_pred             HHHHCCC-eecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC
Confidence            9998854 77778889999998854211          1247888888889999999998853       5899999997


Q ss_pred             CCHHHHHHHHHHHHH
Q 015890          365 LVEDDCKAAADRLRR  379 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~  379 (398)
                       +++++++++++|++
T Consensus       395 -~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          395 -KDSTLDAAEEIFRA  408 (410)
T ss_dssp             -CHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHh
Confidence             99999999999875

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=4.4e-45  Score=345.07  Aligned_cols=367  Identities=22%  Similarity=0.320  Sum_probs=303.9

Q ss_pred             HhHHhhccCc----hHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      ++.|+.....    ..+....+...+|+++++|+.|.+++++++.+.+++ +.+.+. ...|++..+..++++.+++++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~   93 (409)
T 2gb3_A           16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYK   93 (409)
T ss_dssp             CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHH
Confidence            5777765443    334444555567889999999999888889999999 887653 4578777889999999999998


Q ss_pred             hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhh
Q 015890           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l  159 (398)
                      +.++  +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ +++.+ ++.|++.+
T Consensus        94 ~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~-~~~l~~~l  171 (409)
T 2gb3_A           94 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAI-PQNLESFI  171 (409)
T ss_dssp             HTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCC-CTTGGGGC
T ss_pred             HHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ccCCCCCCcc-HHHHHHhh
Confidence            8766  456899999999999999999999999999999999999999999999999998 7764 45555 88999998


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCC
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~  235 (398)
                      +++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++......  ..+++++++|+||.+|++
T Consensus       172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  249 (409)
T 2gb3_A          172 NER--TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSAC  249 (409)
T ss_dssp             CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCG
T ss_pred             CcC--CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCc
Confidence            764  599999999999999999999999999999999999999999  55544222212  145789999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccC
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGG  314 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~  314 (398)
                      |+|+||+++++  +++++.+........ +.+.+.+.++.++|+....++++..+.+.++++.+.+.|++++. .+ ..+
T Consensus       250 G~r~G~~~~~~--~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~  325 (409)
T 2gb3_A          250 GARVGCLITRN--EELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGL-KRFTKP  325 (409)
T ss_dssp             GGCCEEEECSC--HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCBCCC
T ss_pred             cceEEEEEECc--HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCc-eeeeCC
Confidence            99999999993  388888877665555 78899999999999765667888888999999999999988754 55 667


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHh-----cCeEEecCCCCCC-----CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+++++|+.++  ..+..++..+|+++     +||.+.+|..|+.     ++++|++++ .+++++++++++|.++++++
T Consensus       326 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~l~~~  402 (409)
T 2gb3_A          326 SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEGLKMF  402 (409)
T ss_dssp             SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence            77889998887  23677888888754     4999999987753     679999999 58999999999999999887


Q ss_pred             hc
Q 015890          385 VK  386 (398)
Q Consensus       385 ~~  386 (398)
                      ..
T Consensus       403 ~~  404 (409)
T 2gb3_A          403 CS  404 (409)
T ss_dssp             HC
T ss_pred             hh
Confidence            54

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=1.3e-45  Score=347.68  Aligned_cols=349  Identities=18%  Similarity=0.284  Sum_probs=292.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +++++|+.|.++++++|.+.+++.+.+.+. ...|++.  ..++++++++++.+.++  +++++|++++|+++++..++.
T Consensus        31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~  107 (399)
T 1c7n_A           31 NEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVR  107 (399)
T ss_dssp             TTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence            489999999998888999999999987643 4567554  79999999999988777  667899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                      +++++||+|+++.|+|+++...++..|.+++.+ +.+ ++ ++.+|++.|++.++... +++|++++|+||||.++|.++
T Consensus       108 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~-~~~v~~~~~~nptG~~~~~~~  185 (399)
T 1c7n_A          108 EFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDKN-NKALLFCSPHNPVGRVWKKDE  185 (399)
T ss_dssp             HHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCTT-EEEEEEESSBTTTTBCCCHHH
T ss_pred             HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEec-ccccCCCCEEEcHHHHHHHhccCC-CcEEEEcCCCCCCCcCcCHHH
Confidence            999999999999999999999999999999988 764 33 35689999999998322 599999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEeece--eccCCCcc-cc--cc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC--VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~--~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +++|+++|+++|+++|+||+|  +.+++... ..  ..   .++++++.|+||.+|++|+|+||+++++  +++++.+..
T Consensus       186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~l~~  263 (399)
T 1c7n_A          186 LQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN--PDIRERFTK  263 (399)
T ss_dssp             HHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC--HHHHHHHHH
Confidence            999999999999999999999  66655321 11  11   3678999999999999999999999874  568888877


Q ss_pred             hhccCCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          258 VQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       258 ~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      ....+.+ +.+.+.+.++.++++...+++++..+.+.++++.+.+.|++ ++++.+..+.+++++|+.++....+..++.
T Consensus       264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (399)
T 1c7n_A          264 SRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAME  343 (399)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHH
T ss_pred             HHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHH
Confidence            6654443 67889999988888765567888888999999999999987 766677778878888899874223577888


Q ss_pred             HHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          336 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .+|++++||.+.||..|+  .++++||+++. .++++++++++|.++++++.+
T Consensus       344 ~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~  395 (399)
T 1c7n_A          344 EFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLKN  395 (399)
T ss_dssp             HHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHHHh
Confidence            888657899999998876  46899999997 588999999999999988754

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=2.3e-45  Score=343.22  Aligned_cols=333  Identities=14%  Similarity=0.155  Sum_probs=287.9

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~  105 (398)
                      +| ++++|+.|.+++++||.+.+++.+.+..  ...|++..+..++++.+++++.+.+++  ++++|++|+|+++++..+
T Consensus        22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~   98 (376)
T 3ezs_A           22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNF   98 (376)
T ss_dssp             SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHH
T ss_pred             cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHH
Confidence            45 8999999999999999999999988733  567888888999999999999888876  788999999999999999


Q ss_pred             HHHhccC--CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890          106 VLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       106 ~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~  182 (398)
                      +.+++++  ||+|+++.|+|+++...++..|.+++.+ +.+++ ++  ++ .+++.+.++  +++|++++|+||||.+++
T Consensus        99 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~--~~-~l~~~~~~~--~~~v~~~~p~nptG~~~~  172 (376)
T 3ezs_A           99 PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM-PLTKENDF--TP-SLNEKELQE--VDLVILNSPNNPTGRTLS  172 (376)
T ss_dssp             HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTS--CC-CCCHHHHHH--CSEEEECSSCTTTCCCCC
T ss_pred             HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEc-ccCCCCCc--ch-hHHhhhccC--CCEEEEcCCCCCcCCCCC
Confidence            9999999  9999999999999999999999999999 77654 44  33 566666654  489999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc---------cCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV---------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~---------~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      .+++++|+++|+++|+++|+||+|  +.+++......         ..++++++.|+||.+|++|+|+||++.+   +++
T Consensus       173 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~  249 (376)
T 3ezs_A          173 LEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD---SRL  249 (376)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC---HHH
T ss_pred             HHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC---HHH
Confidence            999999999999999999999999  66655332221         4678899999999999999999999998   889


Q ss_pred             HHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          252 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      ++.+.......+++.+.+.+.++.++++. .+++++..+.+.++++.+.+.|+  +. .  .+.+++|+|++++    +.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~--~~-~--~~~~~~~~~~~~~----~~  319 (376)
T 3ezs_A          250 LEKYKAFRAYLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK--NT-L--IYPYSFYVYLPVQ----NG  319 (376)
T ss_dssp             HHHHHHHHTTTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST--TC-C--CCSBSSEEEEECS----CH
T ss_pred             HHHHHHHHhhhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc--CC-C--CCCcceEEEEECC----CH
Confidence            99998877767788999999999999986 56788889999999999999998  33 3  5666899999987    47


Q ss_pred             HHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+++.+|++++||.+.||..|+    .++++||+++. +++++++++++|.+++++
T Consensus       320 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~  374 (376)
T 3ezs_A          320 ENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYREN  374 (376)
T ss_dssp             HHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence            7888888755899999999886    46899999986 899999999999988754

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=2.1e-45  Score=349.01  Aligned_cols=362  Identities=19%  Similarity=0.226  Sum_probs=296.7

Q ss_pred             HHHHHHHH----HcCCCeEEcCCccCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCC
Q 015890           19 MVQIQELV----RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYK   89 (398)
Q Consensus        19 ~~~~~~~~----~~g~~~~~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~   89 (398)
                      ++.+.+..    ..++++++|+.|.+.    +++++.+.+++.+.+.......|++..+..++++.+++++.+.. .+++
T Consensus        39 i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~  118 (427)
T 3dyd_A           39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEA  118 (427)
T ss_dssp             --------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCG
T ss_pred             HHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCCh
Confidence            45554433    235678999999864    57899999999998876556689888999999999999996541 2467


Q ss_pred             CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEE
Q 015890           90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus        90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      ++|++|+|+++|++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++ .++.+|++.+++.+++++  ++|
T Consensus       119 ~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~--~~v  195 (427)
T 3dyd_A          119 KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLY-NLLPEKSWEIDLKQLEYLIDEKT--ACL  195 (427)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHSSCCTTE--EEE
T ss_pred             HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC--CEE
Confidence            899999999999999999999999999999999999999999999999988 6543 456789999999998754  899


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEcccccccCCCcceeEEE
Q 015890          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYI  242 (398)
Q Consensus       169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i  242 (398)
                      ++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.....    ....++++++|+||.|+++|+|+||+
T Consensus       196 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~  275 (427)
T 3dyd_A          196 IVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWI  275 (427)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEE
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEE
Confidence            99999999999999999999999999999999999999  6665533211    12345788999999999999999999


Q ss_pred             EccCCc----HHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          243 AYPSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       243 ~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      ++++..    +++++.+...... +++++.+.+.++.++|+. ..+++++..+.++++++.+.+.|++++++.+..+.++
T Consensus       276 ~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g  354 (427)
T 3dyd_A          276 LIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGA  354 (427)
T ss_dssp             EEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBT
T ss_pred             EecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence            987421    2466666555432 577899999999999984 3577888889999999999999998866677778889


Q ss_pred             EEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          318 IYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       318 ~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +|+|+.++..    ..+..+++.+|++++||.+.||..|+.++++||+++ .+++++++++++|.++++++.
T Consensus       355 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~~~  425 (427)
T 3dyd_A          355 MYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEFCEQHY  425 (427)
T ss_dssp             TEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHHHHHhh
Confidence            9999887621    135678888888789999999999988999999998 589999999999999998764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=1.1e-44  Score=342.30  Aligned_cols=370  Identities=24%  Similarity=0.358  Sum_probs=300.7

Q ss_pred             HhHHhhccCchHHHHHHHHHH----cCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHH
Q 015890            7 LAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALV   78 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~----~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~   78 (398)
                      +++|+.....+.++++.+...    .|++++||+.|.++..  +++.+.+++.+.+.+.  ... |++..+..++++.++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la   85 (407)
T 2zc0_A            7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA   85 (407)
T ss_dssp             SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred             hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence            566776666566666555443    3568999999876543  6789999998887642  134 877788999999999


Q ss_pred             HHHhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHH
Q 015890           79 KKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE  156 (398)
Q Consensus        79 ~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~  156 (398)
                      +++.+.+|  +++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++  +|++.|+
T Consensus        86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~  162 (407)
T 2zc0_A           86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGV-PVDNDG--MRVDLLE  162 (407)
T ss_dssp             HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHH
T ss_pred             HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEc-ccCCCC--CCHHHHH
Confidence            99988777  567899999999999999999999999999999999999999999999999988 776554  7999999


Q ss_pred             Hhhc----cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-cCCcEEEE
Q 015890          157 KTLE----TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-EGDHVVNL  225 (398)
Q Consensus       157 ~~l~----~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~~~~~i~~  225 (398)
                      +.++    +...+++|+ +++|+||||.++|.+++++|+++|+++|+++|+||+|  +.+++....   .. ..++++++
T Consensus       163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (407)
T 2zc0_A          163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA  242 (407)
T ss_dssp             HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred             HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence            9997    522358874 6789999999999999999999999999999999999  555443211   11 23578999


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--c-hHHHHHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--P-EWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~l~~~  302 (398)
                      +|+||.++ +|+|+||++++   +++++.+........++.+.+.+.++..+++..  . .++++..+.++++++.+.+.
T Consensus       243 ~s~sK~~~-~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  318 (407)
T 2zc0_A          243 GTLSKVLG-TGFRIGWIIAE---GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKA  318 (407)
T ss_dssp             EESTTTTC-TTSCCEEEECC---HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHH
T ss_pred             cccccccC-CCcceEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999 99999999998   788888887776666777899999999999864  2 45667778888889999988


Q ss_pred             hcc-CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHH
Q 015890          303 LSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       303 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      |++ .+.+.+..+.+++++|+.++.. .+..++.+.|++++||.+.+|..|.    .++++||+++..+++++++++++|
T Consensus       319 L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l  397 (407)
T 2zc0_A          319 LENHLPNAEFTKPIAGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL  397 (407)
T ss_dssp             HHHHCTTSCBCCCSBSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHH
T ss_pred             HHHhCCCCEEecCCCcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence            876 4545666677789999999753 3677888888744499999998774    357999999976789999999999


Q ss_pred             HHHHHHHh
Q 015890          378 RRGLEELV  385 (398)
Q Consensus       378 ~~~~~~~~  385 (398)
                      .++++++.
T Consensus       398 ~~~l~~~~  405 (407)
T 2zc0_A          398 AKLYKEKF  405 (407)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99998764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1.2e-44  Score=340.04  Aligned_cols=344  Identities=17%  Similarity=0.263  Sum_probs=292.2

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~  105 (398)
                      .++++++|+.|.+++++||.+.+++.+.+.+. .+.|++  +..++++++++++.+.++  +++++|++++|++++++.+
T Consensus        30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~  106 (391)
T 4dq6_A           30 GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLL  106 (391)
T ss_dssp             SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CCCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHH
Confidence            36889999999999999999999999988753 345644  558999999999999888  6788999999999999999


Q ss_pred             HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--C-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015890          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~  182 (398)
                      +.+++++||+|+++.|+|+++...++..|.+++.+ +.+  . .++.+|++++++.+++   +++|++++|+||||.+++
T Consensus       107 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~d~~~l~~~l~~---~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          107 INELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS-PLQKLENGNYIMDYEDIENKIKD---VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             HHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEEC-CCEECTTSCEECCHHHHHHHCTT---EEEEEEESSBTTTTBCCC
T ss_pred             HHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEee-eeeecCCCceEeeHHHHHHHhhc---CCEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999998 766  2 3466899999999987   499999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc---cc---CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~---~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      .+++++|+++|+++|+++|+||+|  +.+.+.....   ..   .++++++.|+||.+|++|+|+||+++++  +++++.
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~  260 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD--EKDYKL  260 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC--HHHHHH
Confidence            999999999999999999999999  6665532211   11   2577999999999999999999999884  578888


Q ss_pred             HHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChH
Q 015890          255 LLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       255 l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +...... ..++.+.+.+.++..+++...+++++..+.++++++++.+.|++ ++++.+..+.+++++|+.++....+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (391)
T 4dq6_A          261 LDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDE  340 (391)
T ss_dssp             HHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHH
T ss_pred             HHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHH
Confidence            7766443 34578889999999888865677888899999999999999987 666688888888888899875334678


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ++...|++++||.++||..|+.  ++++|++++. +++++++++++|.+++
T Consensus       341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          341 ELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAI  390 (391)
T ss_dssp             HHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence            8888887445999999988864  4899999995 8899999999998876

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=7.8e-45  Score=341.33  Aligned_cols=346  Identities=16%  Similarity=0.245  Sum_probs=286.2

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHH-HHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPE-LRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~-~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~  106 (398)
                      +++++|+.|.+++++||.+.+++.+.+... ...|++.  ..+ +|+++++++.+.++  +++++|++++|++++++.++
T Consensus        28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~  104 (390)
T 1d2f_A           28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELI  104 (390)
T ss_dssp             --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHH
T ss_pred             CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHH
Confidence            479999999998889999999999988653 4567554  678 99999999988777  66889999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC--CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      .+++++||+|+++.|+|+++...++..|.+++.+ +.+.+  .+.+|++.|++.+++.. +++|++++|+||||.+++.+
T Consensus       105 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~~-~~~v~l~~p~nptG~~~~~~  182 (390)
T 1d2f_A          105 RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKPE-CKIMLLCSPQNPTGKVWTCD  182 (390)
T ss_dssp             HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTSTT-EEEEEEESSCTTTCCCCCTT
T ss_pred             HHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEe-ecccCCCccccCHHHHHHHhccCC-CeEEEEeCCCCCCCcCcCHH
Confidence            9999999999999999999999999999999988 76543  35689999999998532 59999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece--eccCCCcccc---ccCCc-EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC---VEGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~---~~~~~-~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      ++++|+++|+++|+++|+||+|  +.+++.....   ...+. .. +.|+||.+|++|+|+||+++++  +++++.+...
T Consensus       183 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~~~  259 (390)
T 1d2f_A          183 ELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSA  259 (390)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC--HHHHHHHHHH
Confidence            9999999999999999999999  6665432211   11111 34 8999999999999999999864  6788877766


Q ss_pred             hc-cCCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          259 QD-NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       259 ~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      .. ..++ +.+.+.+.++.++++...+++++..+.++++++.+.+.|++ ++++.+..+.+++++|+.++....+..++.
T Consensus       260 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  339 (390)
T 1d2f_A          260 LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ  339 (390)
T ss_dssp             HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred             HhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence            54 3444 77889998888888765567888888999999999999987 666677778877888899874323577888


Q ss_pred             HHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..|++++||.+.+|..|+  .++++||+++. +++++++++++|.++++++
T Consensus       340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             HHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence            888657899999998885  46899999997 6889999999999998764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=2.2e-45  Score=348.43  Aligned_cols=345  Identities=17%  Similarity=0.237  Sum_probs=293.2

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~  106 (398)
                      |+++++|+.|+++++++|.+.+++.+.+.+. .+.|+...  .++++++++++.+.++  +++++|++++|+++|++.++
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~  136 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNYFN--DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIAL  136 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHH
Confidence            7899999999999999999999999988653 45565433  8999999999999887  66889999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      .+++++||+|+++.|+|+++...++..|.+++.+ +.+  +.++.+|++.|+++++ ++  +++|++++|+||||.++++
T Consensus       137 ~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~le~~i~~~~--~~~vil~~p~nptG~~~~~  213 (421)
T 3l8a_A          137 QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN-SLQIINGRFEIDFEQLEKDIIDNN--VKIYLLCSPHNPGGRVWDN  213 (421)
T ss_dssp             HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEE-ECEEETTEEECCHHHHHHHHHHTT--EEEEEEESSBTTTTBCCCH
T ss_pred             HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEec-cccccCCCeeeCHHHHHHHhhccC--CeEEEECCCCCCCCCcCCH
Confidence            9999999999999999999999999999999988 764  3446789999999998 44  5999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc---cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      +++++|+++|+++|+++|+||+|  +.+.+....   ..   ..++++++.|+||.+|++|+|+||+++++  +++.+.+
T Consensus       214 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~--~~l~~~~  291 (421)
T 3l8a_A          214 DDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN--ESLRRKF  291 (421)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC--HHHHHHH
Confidence            99999999999999999999999  666553221   11   13677999999999999999999999886  6788877


Q ss_pred             HHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHH
Q 015890          256 LKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV  334 (398)
Q Consensus       256 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (398)
                      ...... ..++.+++++.++.++++...+++++..+.++++++++.+.|++++.+.+..+.++++.|++++....+..++
T Consensus       292 ~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l  371 (421)
T 3l8a_A          292 QYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQL  371 (421)
T ss_dssp             HHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHH
T ss_pred             HHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHH
Confidence            766532 3457889999999999986667888999999999999999998776668888888888889987533356788


Q ss_pred             HHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          335 VRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       335 ~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ...|++++||.+.+|..|+.  ++++||+++. +++++++++++|.++++
T Consensus       372 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          372 SEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG  420 (421)
T ss_dssp             HHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence            88887677999999988864  6899999995 89999999999998764

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1.6e-45  Score=349.81  Aligned_cols=371  Identities=24%  Similarity=0.358  Sum_probs=301.2

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|......+.++++.+.. .+++++||+.|.++.  .+++++.+++.+.+....  ...|++..+..++|+++++++.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~-~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~   99 (425)
T 1vp4_A           21 ISKIGQNMKSSIIREILKFA-ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE   99 (425)
T ss_dssp             CCHHHHTCCCCCHHHHTTTT-TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred             hhhhhhcCCCcHHHHHHHhc-cCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHH
Confidence            45666655555566554432 457899999987654  267899999988876421  3578777899999999999998


Q ss_pred             hhcC---CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890           83 QENK---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~---~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      +++|   +++++|++++|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++  +|++.|++.+
T Consensus       100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~~~l  176 (425)
T 1vp4_A          100 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL  176 (425)
T ss_dssp             HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred             hccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHH
Confidence            7767   667899999999999999999999999999999999999999999999999988 776553  7999999998


Q ss_pred             cc------CCCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-cc---ccCCcEEEEc
Q 015890          160 ET------KPTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CC---VEGDHVVNLF  226 (398)
Q Consensus       160 ~~------~~~~~~v-~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~---~~~~~~i~~~  226 (398)
                      ++      ...+++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ..   ...+++++++
T Consensus       177 ~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~  256 (425)
T 1vp4_A          177 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN  256 (425)
T ss_dssp             HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred             HhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEe
Confidence            75      1125887 46799999999999999999999999999999999999  66654321 11   1236789999


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhc
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      |+||.++ +|+|+||++++   +++++.+.......+++.+.+.+.++..+|+..  .+++++..+.++++++.+.+.|+
T Consensus       257 s~sK~~~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~  332 (425)
T 1vp4_A          257 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE  332 (425)
T ss_dssp             ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-cccceEEEeeC---HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999 99999999999   788888877665556677999999999999864  35677888888899999998887


Q ss_pred             cC-C---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHH
Q 015890          305 PL-G---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       305 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                      +. +   ++.+..+.+++|+|+.++... +..++++.|+ ++||.+.||..|.    .++++||+++..+++++++++++
T Consensus       333 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~-~~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~  410 (425)
T 1vp4_A          333 EYFSDIPGVKWVKSEGGLFIWLTLPEGF-DTWEMFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR  410 (425)
T ss_dssp             HHSTTSTTCEECCCSBSSEEEEECCTTC-CTTTTHHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred             HhCCCCCceEEecCCccEEEEEEcCCCC-CHHHHHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence            63 3   356666777899999997532 4567888886 5699999998874    35799999997678999999999


Q ss_pred             HHHHHHHHhcc
Q 015890          377 LRRGLEELVKD  387 (398)
Q Consensus       377 l~~~~~~~~~~  387 (398)
                      |.++++++.++
T Consensus       411 l~~~l~~~~~~  421 (425)
T 1vp4_A          411 LREVVLEYGKE  421 (425)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999887654

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=2.6e-45  Score=349.79  Aligned_cols=347  Identities=17%  Similarity=0.173  Sum_probs=295.2

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~  104 (398)
                      .+|+++++|+.|.+++++++.+.+++.+.+.+.....|++..+..++|+.+++++.+.++  +++++|++|+|++++++.
T Consensus        41 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~  120 (437)
T 3g0t_A           41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV  120 (437)
T ss_dssp             HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred             hcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHH
Confidence            357899999999999999999999999988754337788888889999999999988776  457899999999999999


Q ss_pred             HHHHhc--cCCC--EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCcc
Q 015890          105 IVLTLC--DAGD--SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       105 ~~~~l~--~~gd--~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++.+++  ++||  +|+++.|+|+++...++..|.+++.+ +.+++++.+|++.|++.+ +++  +++|++++|+||||.
T Consensus       121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~--~~~v~l~~p~nptG~  197 (437)
T 3g0t_A          121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESF-DLFEYRGEKLREKLESYLQTGQ--FCSIIYSNPNNPTWQ  197 (437)
T ss_dssp             HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEE-EGGGGCTTHHHHHHHHHHTTTC--CCEEEEESSCTTTCC
T ss_pred             HHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEE-eecCCCCccCHHHHHHHHhcCC--ceEEEEeCCCCCCCC
Confidence            999998  9999  99999999999999999999999999 877677788999999999 444  599999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-c--------ccc-cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-H--------CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-~--------~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      +++.+++++|+++|+++|+++|+||+|  +.+.+.. .        ... ..+++++++|+||.+|++|+|+||++++  
T Consensus       198 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--  275 (437)
T 3g0t_A          198 CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS--  275 (437)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC--
T ss_pred             cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC--
Confidence            999999999999999999999999999  5554321 1        111 2678899999999999999999999999  


Q ss_pred             cHHHHH-H-----------------HHHhhccCCCCcchHHHHHHHHHhcCCchH---HHHHHHHHHHHHHHHHHHhccC
Q 015890          248 VEGFAT-Q-----------------LLKVQDNIPICASIISQHLALYSLQTGPEW---VTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       248 ~~~~~~-~-----------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                       +++++ .                 +.......+++.+.+.+.++..+++....+   +++..+++.++++.+.+.|+++
T Consensus       276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  354 (437)
T 3g0t_A          276 -GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN  354 (437)
T ss_dssp             -HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence             78887 6                 665555556788999999999999863233   7888899999999999999988


Q ss_pred             CCCccc------cC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCC--CeEEEEecCCCHHHHHHHHHHH
Q 015890          307 GEGAVK------GG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       307 ~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      +. .+.      .+ .+++++|+.++  ..+..++.+.|. ++||.+.++..|+..  +++||+++..+++++++++++|
T Consensus       355 g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l  430 (437)
T 3g0t_A          355 GF-NIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRL  430 (437)
T ss_dssp             TE-EESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHH
T ss_pred             CC-EEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence            54 555      24 67899999987  246788888886 679999999887643  7899999977899999999999


Q ss_pred             HHHHHH
Q 015890          378 RRGLEE  383 (398)
Q Consensus       378 ~~~~~~  383 (398)
                      .+++++
T Consensus       431 ~~~~~~  436 (437)
T 3g0t_A          431 QMLNAE  436 (437)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            987753

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=8.9e-45  Score=344.59  Aligned_cols=364  Identities=21%  Similarity=0.268  Sum_probs=292.8

Q ss_pred             HhHHhhccCchHHHHHHHHHHcC-CCeEEcCCccCCCCCcHH--H-------------HHHHHHhhcCCCCCCCCCCCCc
Q 015890            7 LAKRALETEMPIMVQIQELVRGA-KNAVSLAQGVVYWQPPKM--A-------------MEKVKELVWDPSISKYGADEGL   70 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~~l~~g~~~~~~~~~--v-------------~~a~~~~~~~~~~~~y~~~~~~   70 (398)
                      +++|+.....+.++++.+...+. ++.++|+.|.|+...+|.  .             .++..+      ...|++..|.
T Consensus         7 ~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~   80 (425)
T 2r2n_A            7 ITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR------ALQYSPSAGI   80 (425)
T ss_dssp             SCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH------HTSCCCTTCC
T ss_pred             HHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh------hcCCCCCCCC
Confidence            68888877767777776666553 689999999987643331  0             111111      2468888999


Q ss_pred             HHHHHHHHHHHhhhcCCCC---------CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEec
Q 015890           71 PELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG  141 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~---------~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~  141 (398)
                      .++|+++++++.+.++.+.         ++|++|+|++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ 
T Consensus        81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-  159 (425)
T 2r2n_A           81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV-  159 (425)
T ss_dssp             HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE-
T ss_pred             HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-
Confidence            9999999999988887653         589999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCCCCCChHHHHHhhccC----------CCCeEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--ec
Q 015890          142 PCSSKTLHPDADWLEKTLETK----------PTPKLVSV-VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FM  208 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~----------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~  208 (398)
                      +.++++  +|++.|++.++..          ..+++|++ .+|+||||.+++.+++++|+++|++||+++|+||+|  +.
T Consensus       160 ~~~~~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~  237 (425)
T 2r2n_A          160 ASDESG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ  237 (425)
T ss_dssp             CEETTE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred             CcCCCC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            776553  6999999998721          23588876 589999999999999999999999999999999999  66


Q ss_pred             cCCCcc---cc-ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---
Q 015890          209 YDGRKH---CC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---  281 (398)
Q Consensus       209 ~~~~~~---~~-~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---  281 (398)
                      +++...   .. ...+++++++|+||.++ +|+|+||++++   +++++.+........++.+.+.|.++..+|+..   
T Consensus       238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~  313 (425)
T 2r2n_A          238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP---KPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEE  313 (425)
T ss_dssp             SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE---HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccc
Confidence            655321   11 12467899999999998 99999999999   789998888776667889999999999998751   


Q ss_pred             --chHHHHHHHHHHHHHHHHHHHhcc-CCCC-ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---
Q 015890          282 --PEWVTERVKDLVRNREIIREALSP-LGEG-AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---  354 (398)
Q Consensus       282 --~~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---  354 (398)
                        .+++++.++.++++++.+.+.|++ .++. .+..+.+++|+|++++... +..+++.+.+.++||.+.||..|+.   
T Consensus       314 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~l~~~gv~v~pg~~f~~~~~  392 (425)
T 2r2n_A          314 GFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-DVKELIEEKAVKMGVLMLPGNAFYVDSS  392 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-CCHHHHHTHHHHTTEECEEGGGGSSSTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-CHHHHHHHHHHHCCcEEechhhhcCCCC
Confidence              255677788888899999999887 4443 4556778999999997643 4455433344689999999998853   


Q ss_pred             --CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          355 --RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       355 --~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                        .+++||+++..+++++++++++|.+++++.
T Consensus       393 ~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          393 APSPYLRASFSSASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             SCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence              479999998558999999999999998764

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=1.7e-44  Score=339.79  Aligned_cols=364  Identities=23%  Similarity=0.360  Sum_probs=297.7

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCC--CCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~--~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|......+.++++.+.. .++++++|+.|.+..  .+++.+.+++.+.+.+.  ....|++..+..++++.+++++ 
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~-   87 (397)
T 2zyj_A           10 FGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI-   87 (397)
T ss_dssp             SCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-
T ss_pred             hhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-
Confidence            66776666656667666654 357899999887543  26788999988877542  1357877778999999999998 


Q ss_pred             hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC
Q 015890           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus        83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                         |+++++|++++|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.++++  +|+++|++.+++.
T Consensus        88 ---g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~--~d~~~l~~~l~~~  161 (397)
T 2zyj_A           88 ---GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PDLDALEEVLKRE  161 (397)
T ss_dssp             ---TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHHC
T ss_pred             ---CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEec-CcCCCC--CCHHHHHHHHhhc
Confidence               5677899999999999999999999999999999999999999999999999988 766543  7999999999862


Q ss_pred             CCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc---cC---CcEEEEccccccc
Q 015890          163 PTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV---EG---DHVVNLFSFSKAY  232 (398)
Q Consensus       163 ~~~~~v-~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~---~~---~~~i~~~s~sK~~  232 (398)
                      . +++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ...   ..   +++++++|+||.+
T Consensus       162 ~-~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~  240 (397)
T 2zyj_A          162 R-PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL  240 (397)
T ss_dssp             C-CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTT
T ss_pred             C-CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccc
Confidence            2 4887 46799999999999999999999999999999999999  66544321 111   12   6789999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhcc-CC-CC
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSP-LG-EG  309 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~-~~  309 (398)
                      + +|+|+||++++   +++++.+........++.+.+.+.++..+|+... +++++..+.++++++.+.+.|++ .+ ++
T Consensus       241 ~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~  316 (397)
T 2zyj_A          241 S-PGLRVAFAVAH---PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV  316 (397)
T ss_dssp             C-GGGCCEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred             c-ccceeEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence            9 99999999999   7888888776655556778999999999998643 56778888888999999999876 44 35


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .+..+.+++++|++++.. .+..++.++|+ ++||.+.+|..|+    .++++||+++..+++++++++++|.++++++.
T Consensus       317 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~  394 (397)
T 2zyj_A          317 RYTRPKGGMFVWMELPKG-LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL  394 (397)
T ss_dssp             EECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEccCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            666677789999999753 35778888886 6699999998874    46799999997678999999999999998765

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=4.6e-44  Score=338.94  Aligned_cols=352  Identities=21%  Similarity=0.293  Sum_probs=288.4

Q ss_pred             CCCeEEcCCccC----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh------cC--CCCCcEEEec
Q 015890           29 AKNAVSLAQGVV----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE------NK--LYKSSVMVTA   96 (398)
Q Consensus        29 g~~~~~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~------~~--~~~~~v~~~~   96 (398)
                      .+++++|+.|.+    .+++++.+.+++.+.+.......|++..+..++|+++++++.+.      .+  +++++|++++
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~  111 (416)
T 1bw0_A           32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS  111 (416)
T ss_dssp             CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred             CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence            357999999986    56789999999999887654567877788999999999999731      23  5678999999


Q ss_pred             ChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890           97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus        97 g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      |++++++.++.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|++.+++++  +++++++|+|
T Consensus       112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~n  188 (416)
T 1bw0_A          112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKDDKT--KLLIVTNPSN  188 (416)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTE--EEEEEESSCT
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEe-ecCcccCCCCCHHHHHHHhccCC--eEEEEeCCCC
Confidence            99999999999999999999999999999999999999999988 66543 56789999999998654  8999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC----ccccc----cCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR----KHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~----~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      |||.+++.+++++|+++|+++|+++|+||+|  +.+++.    .....    ..+++++++|+||.++++|+|+||++++
T Consensus       189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~  268 (416)
T 1bw0_A          189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV  268 (416)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEE
T ss_pred             CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEee
Confidence            9999999999999999999999999999999  655553    22111    1345788999999998899999999987


Q ss_pred             CC---cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEE
Q 015890          246 SE---VEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  321 (398)
Q Consensus       246 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  321 (398)
                      +.   ...+...+.... ..+++.+.+.++++..+|+. ...++++..++++++++.+.+.|++++++.+..+.+++|+|
T Consensus       269 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  347 (416)
T 1bw0_A          269 DPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM  347 (416)
T ss_dssp             CTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred             CchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence            41   112333333221 12567889999999999985 34678888899999999999999988655666677789999


Q ss_pred             eeCCCC----CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          322 ARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       322 ~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.++..    ..+..+++.+|++++||.+.+|..|+.++++||+++. +++++++++++|.+++++..
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~~  414 (416)
T 1bw0_A          348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQRHA  414 (416)
T ss_dssp             EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred             EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence            887631    1356778888877899999999988878899999984 88999999999999988754

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=5.3e-44  Score=331.25  Aligned_cols=332  Identities=20%  Similarity=0.250  Sum_probs=281.3

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      .+++++++|+.|.+++++||++++++.+.+.+  ...| +..+..++++.+++++    ++++++|++++|+++++..++
T Consensus        13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~~~a~~~~~   85 (354)
T 3ly1_A           13 PSTDNPIRINFNENPLGMSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHH----QVEAPSILLTAGSSEGIRAAI   85 (354)
T ss_dssp             CCSSSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHT----TSCGGGEEEESHHHHHHHHHH
T ss_pred             CCCCceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHh----CCChHHEEEeCChHHHHHHHH
Confidence            46789999999999999999999999998875  5667 5556778888888876    677889999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .+++++||+|+++.|+|+++...++..|.+++.+ +.+++ +.+|++.|++.++..+++++|++++|+||||.+++.+++
T Consensus        86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l  163 (354)
T 3ly1_A           86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV-KMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI  163 (354)
T ss_dssp             HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred             HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence            9999999999999999999999999999999999 77643 678999999999832225999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCcccc----ccC-CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~-~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                      .+|+++| ++|+++|+||+|  +.+.+.....    ... +++++++|+||.+|++|+|+||++++   +++++.+....
T Consensus       164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~  239 (354)
T 3ly1_A          164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH---PTVIALMGRYV  239 (354)
T ss_dssp             HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC---HHHHHHHGGGT
T ss_pred             HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC---HHHHHHHHHhc
Confidence            9999988 799999999999  5554432221    123 78899999999999999999999998   88998887776


Q ss_pred             ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890          260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      .  .++.+.+.+.++.++++. .+++++..++++++++++.+.|++++. .+..+. ++|+|+.++.   +..++...|.
T Consensus       240 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~l~  311 (354)
T 3ly1_A          240 A--GEKINFSGVDAALASMND-SAFITYSKKSNDVSRQILLKALEDLKL-PYLPSE-GNFVFHQLVV---PLKDYQTHMA  311 (354)
T ss_dssp             T--CSCCCHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCC-SSEEEEECSS---CHHHHHHHHH
T ss_pred             C--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCC---CHHHHHHHHH
Confidence            5  478899999999999986 477888899999999999999988754 555444 7789999874   5778888775


Q ss_pred             HhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          340 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                       ++||.+. |..++.++++||+++  +++++++++++|++++++
T Consensus       312 -~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          312 -DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             -HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred             -HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence             7899999 776777899999988  588999999999888753

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-43  Score=330.23  Aligned_cols=327  Identities=19%  Similarity=0.263  Sum_probs=278.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +++++++|+.|.+++++||++.+++.+.+..  ...| +..+..++++.+++++    ++++++|++++|++++++.++.
T Consensus        30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~v~~~~g~t~a~~~~~~  102 (363)
T 3ffh_A           30 GLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY----QLEEEELIFTAGVDELIELLTR  102 (363)
T ss_dssp             TCSCCEECSSCSCTTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCCceEEccCCCCCCCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh----CCChhhEEEeCCHHHHHHHHHH
Confidence            4578999999999999999999999987754  4566 5678899999999998    5778899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++++++.++++  +++|++++|+||||.++|.+++.
T Consensus       103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~--~~~v~~~~p~nptG~~~~~~~l~  178 (363)
T 3ffh_A          103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREI-PLLQ-DGEHDLEGMLNAIDEK--TTIVWICNPNNPTGNYIELADIQ  178 (363)
T ss_dssp             HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEE-ECCT-TSCCCHHHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCC-CCCcCHHHHHHhcccC--CCEEEEeCCCCCcCCCcCHHHHH
Confidence            999999999999999999999999999999999 7765 4678999999999865  49999999999999999988888


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCcc----ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      ++++.|++ |+++|+||+|  +.+ +...    .....++++++.|+||.+|++|+|+||++++   +++++.+..... 
T Consensus       179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~-  252 (363)
T 3ffh_A          179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD---KEIIRQLNIVRP-  252 (363)
T ss_dssp             HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC---HHHHHHHHHTCC-
T ss_pred             HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC---HHHHHHHHHhCC-
Confidence            88887777 9999999999  444 3211    1223678899999999999999999999998   899998887765 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       +++.+.+.++++..+++. .+++++..++++++++++.+.|+++.++.+.++. ++|+|+.++.   +..++.+.|. +
T Consensus       253 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~l~-~  325 (363)
T 3ffh_A          253 -PFNTTSIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI---EAGTIFSYLE-K  325 (363)
T ss_dssp             -SCCCBHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS---CHHHHHHHHH-H
T ss_pred             -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC---CHHHHHHHHH-H
Confidence             678899999999999985 5778888999999999999999885455666555 7888999874   5778888776 7


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +||.+.+|..|+.++++||+++  +++++++++++|+++
T Consensus       326 ~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          326 NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL  362 (363)
T ss_dssp             TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred             CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence            8999999999888899999998  689999999998875

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.6e-43  Score=329.51  Aligned_cols=328  Identities=19%  Similarity=0.258  Sum_probs=280.5

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +.+++++|+.|.+++++||.+++++.+.+..  ...|+...+ .++|+.+++++    ++++++|++++|++++++.++.
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~v~~~~g~~~a~~~~~~  100 (365)
T 3get_A           28 GVKEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY----KVQNENIIIGAGSDQVIEFAIH  100 (365)
T ss_dssp             TCSCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred             CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence            4478999999999999999999999998874  567865555 89999999987    6778899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++++||+|+++.|+|+++...++..|.+++.+ +.+.+++ +|++++++.++++  +++|++++|+||||.+++.+++.
T Consensus       101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~d~~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~  176 (365)
T 3get_A          101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKT-QSITHNL-DEFKKLYETHKDE--IKLIFLCLPNNPLGECLDASEAT  176 (365)
T ss_dssp             HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEEC-SSSSCCH-HHHHHHHHHTTTT--EEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecCCCCC-CCHHHHHHHhCCC--CCEEEEcCCCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999 7644556 8999999999865  49999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--ecc--CCC-cccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMY--DGR-KHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~--~~~-~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                      +|+++| ++|+++|+||+|  +.+  .+. ....    ...+++++++|+||.+|++|+|+||++++   +++++.+...
T Consensus       177 ~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~  252 (365)
T 3get_A          177 EFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN---ANIISAFYKL  252 (365)
T ss_dssp             HHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC---HHHHHHHHHH
T ss_pred             HHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC---HHHHHHHHHh
Confidence            998888 579999999999  553  221 1111    13578899999999999999999999997   8899988876


Q ss_pred             hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890          259 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL  338 (398)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  338 (398)
                      ..  .++.+.+.+.++..+++. .+++++..+++.++++++.+.|++++. .+..+. ++|+|+.++..  +..++.+.|
T Consensus       253 ~~--~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~-~~~~~~~~~~~--~~~~~~~~l  325 (365)
T 3get_A          253 RA--PFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHNI-KIIDSY-TNFITYFFDEK--NSTDLSEKL  325 (365)
T ss_dssp             SC--TTCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-EECCCS-SSEEEEECSSS--CHHHHHHHH
T ss_pred             cC--CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-EECCCC-CeEEEEECCCC--CHHHHHHHH
Confidence            65  467899999999999985 577888999999999999999988854 666555 67789999754  677888877


Q ss_pred             HHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          339 AHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       339 l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      . ++||.+.+|..|+ ++++|++++  +++++++++++|++++
T Consensus       326 ~-~~gi~v~~g~~~~-~~~iRis~~--~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          326 L-KKGIIIRNLKSYG-LNAIRITIG--TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             H-TTTEECEECGGGT-CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred             H-HCCEEEEECccCC-CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence            5 7899999999888 899999998  5889999999998765

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=2.2e-44  Score=342.63  Aligned_cols=344  Identities=17%  Similarity=0.243  Sum_probs=285.9

Q ss_pred             CCCeEEcCCccC-CCCCcHHH--HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc-CCCCCc---EEEecChHHH
Q 015890           29 AKNAVSLAQGVV-YWQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSS---VMVTAGANQA  101 (398)
Q Consensus        29 g~~~~~l~~g~~-~~~~~~~v--~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~-~~~~~~---v~~~~g~t~a  101 (398)
                      .+++++|+.|.+ +++.+|.+  .+++.+.+.......|++..|..++++++++++.+.+ ++++++   |++|+|++++
T Consensus        46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~a  125 (430)
T 2x5f_A           46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHG  125 (430)
T ss_dssp             TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHH
T ss_pred             CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHH
Confidence            467999999999 88877877  7777666543235678777889999999999997765 456788   9999999999


Q ss_pred             HHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCcc
Q 015890          102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       102 ~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~  179 (398)
                      ++.++.+++++||+|+++.|+|+++...++. .|.+++.+ +.++.++.+|++.|++.++.. ..++++++++|+||||.
T Consensus       126 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~  204 (430)
T 2x5f_A          126 LSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTY-PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGY  204 (430)
T ss_dssp             HHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEE-CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCC
T ss_pred             HHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEE-eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Confidence            9999999999999999999999999999999 99999999 776533678999999999751 12589999999999999


Q ss_pred             CCCHHHHHHHHHHHHH-----cCCEEEEeece--eccCCCcc-c---cc-c-CCc---EEEEcccccccCCCcceeEEEE
Q 015890          180 YIPERLLKRISDLCKA-----AGSWLVVDNTY--FMYDGRKH-C---CV-E-GDH---VVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~-----~~~~livDe~~--~~~~~~~~-~---~~-~-~~~---~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +++.+++++|+++|++     +|+++|+||+|  +.+++... .   .. . .++   +++++|+||.+|++|+|+||++
T Consensus       205 ~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~  284 (430)
T 2x5f_A          205 TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMT  284 (430)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEE
T ss_pred             cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEE
Confidence            9999999999999999     99999999999  66655321 1   11 2 567   8999999999999999999999


Q ss_pred             c---cCCcHHHHHHHHHhhcc----CCCCcchHHHHHHHHHhc-CCchHHHH---HHHHHHHHHHHHHHHhc----cCCC
Q 015890          244 Y---PSEVEGFATQLLKVQDN----IPICASIISQHLALYSLQ-TGPEWVTE---RVKDLVRNREIIREALS----PLGE  308 (398)
Q Consensus       244 ~---~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~-~~~~~~~~---~~~~~~~~~~~l~~~l~----~~~~  308 (398)
                      +   +   +++++.+......    .+++.+.+.+.++.++|+ .. .+.++   ..+.++++++.+.+.|+    +.+ 
T Consensus       285 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-  359 (430)
T 2x5f_A          285 FGTSD---QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-  359 (430)
T ss_dssp             EBCCC---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-
T ss_pred             EecCC---HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-
Confidence            9   7   7888888766544    567889999999999998 63 34444   78888899999999998    454 


Q ss_pred             CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+..+.+++|+|+.++ . .+..+++.+|++++||.+.||    .++++||+++..+++++++++++|.++++++
T Consensus       360 ~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~  429 (430)
T 2x5f_A          360 WQAYDFNSGYFMAIKVH-D-VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL  429 (430)
T ss_dssp             EEECCCCBSSEEEEEES-S-SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred             ceeeCCCceEEEEeCCC-C-CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            46667777889999987 3 367788888875499999997    4679999999558899999999999998764

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.9e-43  Score=329.09  Aligned_cols=329  Identities=20%  Similarity=0.308  Sum_probs=281.7

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+++++|+.|.+++++||++.+++.+.+.+.....|+. .+..++++.+++++    ++ ++++|++++|++++++.++.
T Consensus        29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~  103 (367)
T 3euc_A           29 SHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM----QVPAGMEVLLGNGSDEIISMLAL  103 (367)
T ss_dssp             CTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH----TCCTTCEEEEEEHHHHHHHHHHH
T ss_pred             CCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh----CCCCcceEEEcCCHHHHHHHHHH
Confidence            36799999999999999999999999886433567744 57889999999987    56 67899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      +++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++.|++.+++ ++  ++|++++|+||||.+++.+++
T Consensus       104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~~~~l  179 (367)
T 3euc_A          104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGV-PLRA-DFTLDRGAMLAAMAEHQP--AIVYLAYPNNPTGNLFDAADM  179 (367)
T ss_dssp             HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCHHHH
T ss_pred             HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHHHhhccCC--CEEEEcCCCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999 8775 457899999999986 54  999999999999999999999


Q ss_pred             HHHHHHHHHc--CCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          187 KRISDLCKAA--GSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       187 ~~i~~l~~~~--~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      ++|+++|++|  |+++|+||+|  +...+........++++++.|+||. +++|+|+||++++   +++++.+.....  
T Consensus       180 ~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~--  253 (367)
T 3euc_A          180 EAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD---PQWLEQLDKVRP--  253 (367)
T ss_dssp             HHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC---HHHHHHHGGGCC--
T ss_pred             HHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeC---HHHHHHHHHhCC--
Confidence            9999999999  9999999999  4433332233345788999999999 8899999999998   888888876654  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +++.+.+.+.++..+++. .+++++..+++.++++++.+.|++++++.+.+ .+++|+|+.++    +..++...| .++
T Consensus       254 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~~~~~~~~~~~----~~~~l~~~l-~~~  326 (367)
T 3euc_A          254 PYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP-SAANFLLARVP----DAAQTFDRL-LAR  326 (367)
T ss_dssp             SSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC-CSSSEEEEECS----CHHHHHHHH-HTT
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC----CHHHHHHHH-HHC
Confidence            567899999999999987 67788999999999999999999886656554 44888899887    467788776 589


Q ss_pred             CeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       343 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ||.++++..|+  .++++|++++  +++++++++++|++++
T Consensus       327 gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          327 KVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASL  365 (367)
T ss_dssp             TEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred             CeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHh
Confidence            99999998764  4689999988  6899999999998765

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=6.2e-44  Score=334.41  Aligned_cols=356  Identities=15%  Similarity=0.173  Sum_probs=278.3

Q ss_pred             hHHhhccCchHHHHHHHHHHc--CCCeEEcCCccC-----CCCCcHHHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHHH
Q 015890            8 AKRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-----YWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALVK   79 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~--g~~~~~l~~g~~-----~~~~~~~v~~a~~~~~-~~~~~~~y~~~~~~~~~~~~l~~   79 (398)
                      ..++.....+.+..+....+.  ..+.|+|+.|.+     +..+++.+.+++. .+ .....++|++..|.+++|+++++
T Consensus         5 ~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~   83 (405)
T 3k7y_A            5 LSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQN   83 (405)
T ss_dssp             GGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHH
T ss_pred             hhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHH
Confidence            346666666666666655543  367999999972     2345788888866 43 33346789999999999999999


Q ss_pred             HHhhhcCC--CCCc--EEEecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCCh
Q 015890           80 KLNQENKL--YKSS--VMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA  152 (398)
Q Consensus        80 ~l~~~~~~--~~~~--v~~~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~  152 (398)
                      ++.+.++.  ++++  +++|+|+++|+..++..+..  + |+|++++|+|+++...++..|++++.+ +. +++++.+|+
T Consensus        84 ~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~  161 (405)
T 3k7y_A           84 LIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYI-NFFDYNLIDINY  161 (405)
T ss_dssp             HHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEE-CCEETTTTEECH
T ss_pred             HHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEE-eccccccCCcCH
Confidence            99766543  3454  69999999999999999987  8 999999999999999999999999999 77 455678999


Q ss_pred             HHHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc-----cc--cccCCcE
Q 015890          153 DWLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK-----HC--CVEGDHV  222 (398)
Q Consensus       153 e~l~~~l~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~-----~~--~~~~~~~  222 (398)
                      +.+++.++..+..+++++++| |||||.+++.+++++|+++|+++|+++|+||+|  +.+++..     ..  ....+++
T Consensus       162 ~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  241 (405)
T 3k7y_A          162 DLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAF  241 (405)
T ss_dssp             HHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCE
T ss_pred             HHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcE
Confidence            999999975333478888755 899999999999999999999999999999999  6654311     11  1224689


Q ss_pred             EEEcccccccCCCcceeEEEEc--cCCcHHHHHHHH----HhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVK  290 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~  290 (398)
                      ++++|+||.|+++|+|+||+++  ++  +++++.+.    ........+.+...|.++..+++..      .++++++++
T Consensus       242 i~~~S~SK~~~l~GlRiG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~  319 (405)
T 3k7y_A          242 SVCQSFSKNMSLYGERAGALHIVCKN--QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQ  319 (405)
T ss_dssp             EEEEECTTTSCCTTTTEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCCccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999864  33  66655543    2222334456788888888888752      123456677


Q ss_pred             HHHHHHHHHHHHhc----cCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec
Q 015890          291 DLVRNREIIREALS----PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG  363 (398)
Q Consensus       291 ~~~~~~~~l~~~l~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~  363 (398)
                      .++++++.+.+.|+    +++.   +.+..+++++|+|+.++.      +++.+| +++||.+.|+.        |||++
T Consensus       320 ~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------~~~~~L-~~~gV~v~p~~--------Ris~a  384 (405)
T 3k7y_A          320 RITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------KIAEHL-KTHHIYIINNG--------RINVS  384 (405)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG------GGTTTT-TTTTEECCTTS--------EEEGG
T ss_pred             HHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH------HHHHHH-HHCCEeecCCC--------eEEEe
Confidence            78999999999998    7653   477788999999988753      445667 79999999963        99998


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 015890          364 GLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       364 ~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..+++++++++++|.+++++
T Consensus       385 ~~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          385 GITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             GCCTTHHHHHHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHHHHHHHhh
Confidence            87889999999999998864

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=7.2e-44  Score=340.90  Aligned_cols=340  Identities=22%  Similarity=0.348  Sum_probs=279.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      +|+++++|+.|.++++.+|.+.+++.+.+.+    .....|++..+..++++++++++....++++++|++++|+++++.
T Consensus        67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~  146 (449)
T 3qgu_A           67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA  146 (449)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence            4788999999999999999999999988863    335678888899999999999987111456789999999999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE----------EEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeC
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT----------HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      .+ ..++++||+|+++.|+|+++...++..|.+          ++.+ +.+++ ++.+|++.+     +  .+++|++++
T Consensus       147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~--~~~~v~l~~  217 (449)
T 3qgu_A          147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYM-VCNPDNHFFPDLSKA-----K--RTDIIFFCS  217 (449)
T ss_dssp             HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEE-ECCGGGTTCCCGGGC-----C--CCSEEEEES
T ss_pred             HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEE-ecccccCCcCChhHc-----C--CCCEEEEeC
Confidence            98 888899999999999999999999999988          8888 76644 555555432     2  359999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-ccc----cCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-CCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      |+||||.+++.+++++|+++|+++|+++|+||+|  +.+++... ...    ..++++++.|+||.+|++|+|+||++++
T Consensus       218 p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~  297 (449)
T 3qgu_A          218 PNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVP  297 (449)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECC
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecC
Confidence            9999999999999999999999999999999999  55554221 111    1356899999999999999999999998


Q ss_pred             CCcHHHHH--------HHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          246 SEVEGFAT--------QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       246 ~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +   ++++        .+.........+.+.+.+.++.++++. ..+++++..+.+.++++.+.+.|++.+. .+..+.+
T Consensus       298 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~  373 (449)
T 3qgu_A          298 K---ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDD  373 (449)
T ss_dssp             T---TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEESSS
T ss_pred             H---HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCC
Confidence            4   4332        344444444567899999999999875 3366788889999999999999998864 7777777


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++|+|+.++  ..+..+++.+|++++||.+.||..|+.  +++|||++.. +++++++++++|.+++++
T Consensus       374 ~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~  439 (449)
T 3qgu_A          374 APYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYGK  439 (449)
T ss_dssp             SSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC-
T ss_pred             eeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence            999999998  346788998898777999999998863  6899999876 899999999999987754

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=8e-43  Score=336.96  Aligned_cols=338  Identities=23%  Similarity=0.326  Sum_probs=276.1

Q ss_pred             CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHHHhc-cCCCEEE
Q 015890           44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVV  117 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~-~~gd~Vl  117 (398)
                      .|+.+++++.+.+...   ....|++..|..++|+.+++++.+.+|  +++++|++|+|+++++..++.+++ ++||.|+
T Consensus       107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl  186 (500)
T 3tcm_A          107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGIL  186 (500)
T ss_dssp             SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred             CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence            4556777777777652   467899999999999999999987766  568899999999999999999998 8999999


Q ss_pred             EeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          118 MFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       118 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      ++.|+|+++...++..|.+++.+ +.+++ ++.+|++.|++.+++.    ..+++|++++|+||||.+++.+++++|+++
T Consensus       187 v~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l  265 (500)
T 3tcm_A          187 VPIPQYPLYSASIALHGGALVPY-YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF  265 (500)
T ss_dssp             EEESCCTHHHHHHHHTTCEEEEE-ECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             EeCCCcHhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence            99999999999999999999999 77654 5789999999999851    125899999999999999999999999999


Q ss_pred             HHHcCCEEEEeece--eccCCC-cccc-----------ccCCcEEEEccccccc-CCCcceeEEEEc---cCCcHHHHHH
Q 015890          193 CKAAGSWLVVDNTY--FMYDGR-KHCC-----------VEGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQ  254 (398)
Q Consensus       193 ~~~~~~~livDe~~--~~~~~~-~~~~-----------~~~~~~i~~~s~sK~~-~~~G~r~G~i~~---~~~~~~~~~~  254 (398)
                      |+++|+++|+||+|  +.+++. ....           ....++++++|+||.| |++|+|+||+++   +   +++++.
T Consensus       266 a~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~---~~~~~~  342 (500)
T 3tcm_A          266 CKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS---APVREQ  342 (500)
T ss_dssp             HHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC---TTHHHH
T ss_pred             HHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC---HHHHHH
Confidence            99999999999999  556432 2111           1123578899999999 899999999987   5   678888


Q ss_pred             HHHhhccCCCCcchHHHHHHHHHhcCC----------chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC
Q 015890          255 LLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL  324 (398)
Q Consensus       255 l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  324 (398)
                      +..... ..++++.+.|.++..+++..          ..+..+.++.++++++.+.+.|++++++.+..+++++|+|+++
T Consensus       343 l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~  421 (500)
T 3tcm_A          343 IYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQI  421 (500)
T ss_dssp             HHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEE
T ss_pred             HHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeee
Confidence            776653 46778899999999988731          1345666778888899999999988666888889899999655


Q ss_pred             CCC-----------CCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          325 PEK-----------HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       325 ~~~-----------~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      ...           ..+...++.++++++||++.||+.|+.   .++||++++ ++++++++++++|.++++++.++
T Consensus       422 ~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~~~  497 (500)
T 3tcm_A          422 CLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFMSE  497 (500)
T ss_dssp             CCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence            311           011233456778889999999999863   458999999 68999999999999999988764

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=2.2e-43  Score=335.93  Aligned_cols=338  Identities=24%  Similarity=0.361  Sum_probs=275.6

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      +++++++|+.|+++++.||.+++++.+.+..    ...+.|++..+..++++++++++.+..++++++|++++|+++++.
T Consensus        54 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~  133 (432)
T 3ei9_A           54 PDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDIS  133 (432)
T ss_dssp             TTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHH
Confidence            4578999999999999999999999988763    234578778899999999999998766778899999999999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCc------------EEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEE
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSV  170 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i  170 (398)
                      .+ ..++++||+|+++.|+|+++...++..|.            +++.+ +.+.. ++..|++.     .+  .+++|++
T Consensus       134 ~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~-----~~--~~~~v~l  204 (432)
T 3ei9_A          134 RL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM-RCTPENGFFPDLST-----VG--RTDIIFF  204 (432)
T ss_dssp             HH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE-ECCGGGTTSCCGGG-----CC--CCSEEEE
T ss_pred             HH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe-ccCcccCCcCChhh-----CC--CCCEEEE
Confidence            74 77789999999999999999988887773            56666 65533 34455433     12  3599999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccccccCCCcceeEEEEc
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAY  244 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~  244 (398)
                      ++|+||||.+++.+++++|+++|++||+++|+||+|  +.+++......    ..+++++++|+||.||++|+|+||+++
T Consensus       205 ~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~  284 (432)
T 3ei9_A          205 CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI  284 (432)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEEC
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEE
Confidence            999999999999999999999999999999999999  54543322221    135689999999999999999999999


Q ss_pred             cCCcHHH--------HHHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC
Q 015890          245 PSEVEGF--------ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE  315 (398)
Q Consensus       245 ~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  315 (398)
                      ++   ++        ++.+.........+.+.+++.++.+++.. ..+++++..+.+.++++.+.+.|++++. .+..+.
T Consensus       285 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~  360 (432)
T 3ei9_A          285 PK---KLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGY-DVYGGK  360 (432)
T ss_dssp             CT---TCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEECS
T ss_pred             Ch---HHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCc-eecCCC
Confidence            84   44        56666555545667889999998888863 3366788889999999999999988854 677666


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      +++|+|+.++.  .+..+++.++++++||.+.||..|+.  ++++||++.. +++++++++++|++--
T Consensus       361 ~~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~~~  425 (432)
T 3ei9_A          361 NAPYVWVHFPN--QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQLY  425 (432)
T ss_dssp             SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred             cceEEEEECCC--CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence            78999999983  36778888888778999999998863  6899999975 8999999999998654

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=6.8e-44  Score=338.23  Aligned_cols=363  Identities=16%  Similarity=0.134  Sum_probs=284.4

Q ss_pred             hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCC---CCCcHHHHHHHHHhhc--CC-CCCCCCCCCCcHHHHHHHHHHH
Q 015890            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVKELVW--DP-SISKYGADEGLPELRDALVKKL   81 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~---~~~~~~v~~a~~~~~~--~~-~~~~y~~~~~~~~~~~~l~~~l   81 (398)
                      ++++.......+.+..++...| ..++|+.|.|+   +++++.+.+++.+.+.  .. ....|++..|..++|+++++++
T Consensus        11 ~~~l~~~~~~~~~~~~~l~~~~-~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~   89 (422)
T 3d6k_A           11 AARLAQVREEVTAKYAELKAKN-LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL   89 (422)
T ss_dssp             -------CHHHHHHHHHHHHTT-CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH
T ss_pred             HHHHHhhHHHHHHHHHHHhccC-CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh
Confidence            4455544556666666666654 48999999998   7778888888776531  21 2568988889999999999998


Q ss_pred             hhhcCCCCCcEEEecChHHHH--HHHHHHhccC------------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCC
Q 015890           82 NQENKLYKSSVMVTAGANQAF--VNIVLTLCDA------------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT  147 (398)
Q Consensus        82 ~~~~~~~~~~v~~~~g~t~a~--~~~~~~l~~~------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  147 (398)
                          ++++++|++|+|+++++  ..++.++..+            +|+|+++.|+|+++...++..|.+++.+ +.++++
T Consensus        90 ----~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~g  164 (422)
T 3d6k_A           90 ----GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDEG  164 (422)
T ss_dssp             ----TCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE
T ss_pred             ----CCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec-CCCCCC
Confidence                67889999999999997  6777777765            3479999999999999999999999999 776654


Q ss_pred             CCCChHHHHHhhccCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEeece--eccC--CCcc-cc----
Q 015890          148 LHPDADWLEKTLETKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTY--FMYD--GRKH-CC----  216 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~-i~~p~nptG~~~~~~~l~~i~~l~~-~~~~~livDe~~--~~~~--~~~~-~~----  216 (398)
                        +|++.+++.+++.. +++|+ +++|+||||.+++.+++++|+++|+ ++|+++|+||+|  +.+.  +... ..    
T Consensus       165 --~d~~~l~~~l~~~~-~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  241 (422)
T 3d6k_A          165 --PDMGVVRELVKDPQ-VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFA  241 (422)
T ss_dssp             --ECHHHHHHHHTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHH
T ss_pred             --CCHHHHHHHHhcCC-CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHh
Confidence              79999999997533 58888 6799999999999999999999999 999999999999  2342  2111 11    


Q ss_pred             ---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C--chHHHHHHH
Q 015890          217 ---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVK  290 (398)
Q Consensus       217 ---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~  290 (398)
                         ...+++++++|+||. +++|+|+||++++   +++++.+........++.+.+.|.++..+|+. +  .+++++.++
T Consensus       242 ~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~  317 (422)
T 3d6k_A          242 QAAGNPNRFWFMSSTSKI-THAGSGVSFFASS---KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAA  317 (422)
T ss_dssp             HHTTCTTCEEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred             hccCCCCcEEEEcChhhh-cCcccceEEEEeC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence               135789999999999 5799999999999   88999888877666778899999999999986 2  256677777


Q ss_pred             HHHHHHHHHHHHhcc----CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC-CCCC-----CCCeEEE
Q 015890          291 DLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-GACG-----CRGHLRI  360 (398)
Q Consensus       291 ~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g-~~~~-----~~~~iRi  360 (398)
                      .++++++.+.+.|.+    .+.+.+..+.+++|+|++++..  +..++.. ++.++||.++|+ ..|.     .++++||
T Consensus       318 ~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~-~l~~~gV~v~~~g~~f~~~~~~~~~~iRi  394 (422)
T 3d6k_A          318 SLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVE-LAKEAGIALTGAGSSFPLHNDPNNENIRL  394 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHH-HHHHCCeEEEcCccccCCCCCCCCCeEEE
Confidence            777778777766653    4444556677799999999753  4555555 556899999994 4453     3589999


Q ss_pred             EecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          361 SFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       361 ~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++..+++++++++++|.++++++..
T Consensus       395 s~~~~~~e~i~~~~~~l~~~l~~~~~  420 (422)
T 3d6k_A          395 APSLPPVAELEVAMDGFATCVLMAAL  420 (422)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99965899999999999999987653

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=8.5e-43  Score=323.25  Aligned_cols=317  Identities=22%  Similarity=0.301  Sum_probs=264.5

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      +++++|+.|.+++++||.+      .+.  ....|++. +..++|+++++++    ++++++|++++|++++++.++.++
T Consensus        29 ~~~i~l~~~~~~~~~~~~v------a~~--~~~~Y~~~-~~~~lr~~la~~~----~~~~~~v~~~~G~~~ai~~~~~~~   95 (356)
T 1fg7_A           29 NGDVWLNANEYPTAVEFQL------TQQ--TLNRYPEC-QPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIRAF   95 (356)
T ss_dssp             TCSEECSSCCCSSCCCCCC------CCC--CTTSCCCS-SCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHHHH
T ss_pred             CceEEeeCCCCCCCCCHhH------hhh--hhccCCCc-cHHHHHHHHHHHh----CCChHHEEEcCCHHHHHHHHHHHH
Confidence            4689999999999888877      222  25678554 5899999999998    677889999999999999999999


Q ss_pred             ccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 ~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      +++| |+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++++++.++ +  +++|++++|+||||.+++.+++++
T Consensus        96 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~-~--~~~v~l~~p~nptG~~~~~~~l~~  170 (356)
T 1fg7_A           96 CEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTLD-NWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDFRT  170 (356)
T ss_dssp             CCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCCT-TSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             hCCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-eCCC-CCCCCHHHHHHHhc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence            9999 999999999999999999999999998 7763 46789999999987 4  599999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEeece--eccCCCcc-c-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMYDGRKH-C-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~~~~~~-~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      |+++|+ +|+++|+||+|  +.. +... . ....+++++++|+||.+|++|+|+||++++   +++++.+.....  ++
T Consensus       171 l~~~~~-~~~~li~De~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~  243 (356)
T 1fg7_A          171 LLELTR-GKAIVVADEAYIEFCP-QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--PY  243 (356)
T ss_dssp             HHHHHT-TTCEEEEECTTGGGSG-GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--SS
T ss_pred             HHHhCC-CCCEEEEEccchhhcC-CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC---HHHHHHHHHhcC--CC
Confidence            999999 99999999999  331 1111 1 123467899999999999999999999998   888888877654  45


Q ss_pred             CcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          265 CASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +.+.+.+.++.++++. ..+  +++..+.++++++++.+.|++++.+....+.+++|+|++++    +..++.++| .++
T Consensus       244 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~~~  317 (356)
T 1fg7_A          244 PLSTPVADIAAQALSP-QGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSL-WDQ  317 (356)
T ss_dssp             CSCHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHH-HHT
T ss_pred             CCCHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC----CHHHHHHHH-HHC
Confidence            7889999999999975 333  78888889999999999998877422333455889999986    467788877 589


Q ss_pred             CeEEec-CCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          343 GVVVIP-GGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       343 gi~v~~-g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      ||.+++ |..|+.++++||+++.  ++++++++++|++
T Consensus       318 gI~v~~~g~~~~~~~~iRis~~~--~~e~~~~~~~l~~  353 (356)
T 1fg7_A          318 GIILRDQNKQPSLSGCLRITVGT--REESQRVIDALRA  353 (356)
T ss_dssp             TEECEECTTSTTCTTEEEEECCC--HHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCCCCeEEEEeCC--HHHHHHHHHHHHh
Confidence            999999 8878777899999984  7888888888764

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.9e-43  Score=336.06  Aligned_cols=366  Identities=17%  Similarity=0.320  Sum_probs=281.1

Q ss_pred             chHHHHHHHHHHc---CC-----CeEEcCCccCCC---CC----------------------cHHHHHHHHHhhcCC---
Q 015890           16 MPIMVQIQELVRG---AK-----NAVSLAQGVVYW---QP----------------------PKMAMEKVKELVWDP---   59 (398)
Q Consensus        16 ~~~~~~~~~~~~~---g~-----~~~~l~~g~~~~---~~----------------------~~~v~~a~~~~~~~~---   59 (398)
                      .+...+..++.++   |.     +++.++.|.+..   .+                      |..+++++.+.+...   
T Consensus        41 g~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~  120 (498)
T 3ihj_A           41 GPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGN  120 (498)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC---
T ss_pred             CHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCC
Confidence            3444554444443   44     899999987622   22                      555666666666531   


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHhhhcC---CCCCcEEEecChHHHHHHHHHHhccCCC----EEEEeCCCCcChhhHHHh
Q 015890           60 SISKYGADEGLPELRDALVKKLNQENK---LYKSSVMVTAGANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQM  132 (398)
Q Consensus        60 ~~~~y~~~~~~~~~~~~l~~~l~~~~~---~~~~~v~~~~g~t~a~~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~  132 (398)
                      ....|++..|..++|+++++++.+.++   +++++|++|+|+++++..++.+++++||    .|+++.|+|+.+...++.
T Consensus       121 ~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~  200 (498)
T 3ihj_A          121 SLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE  200 (498)
T ss_dssp             -------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence            356799999999999999999988874   4688999999999999999999998875    999999999999999999


Q ss_pred             cCcEEEEeccCCCC-CCCCChHHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890          133 TGVTHILVGPCSSK-TLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--  206 (398)
Q Consensus       133 ~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--  206 (398)
                      .|.+++.+ +.+++ +|.+|+++|++.+++..   .+++|++++|+||||.+++.+++++|+++|+++|+++|+||+|  
T Consensus       201 ~g~~~v~~-~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~  279 (498)
T 3ihj_A          201 LDAIQVNY-YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD  279 (498)
T ss_dssp             TTCEEEEE-ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             cCCEEEEe-eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccc
Confidence            99999999 77654 57899999999998521   2599999999999999999999999999999999999999999  


Q ss_pred             eccCCC-ccccc------------cCCcEEEEccccccc-CCCcceeEEEE---ccCCcHHHHHHHHHhhccCCCCcchH
Q 015890          207 FMYDGR-KHCCV------------EGDHVVNLFSFSKAY-GMMGWRVGYIA---YPSEVEGFATQLLKVQDNIPICASII  269 (398)
Q Consensus       207 ~~~~~~-~~~~~------------~~~~~i~~~s~sK~~-~~~G~r~G~i~---~~~~~~~~~~~l~~~~~~~~~~~~~~  269 (398)
                      +.+++. .....            ...++++++|+||.+ |++|+|+||++   .+   +++++.+..... ...+.+.+
T Consensus       280 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~---~~l~~~l~~~~~-~~~~~~~~  355 (498)
T 3ihj_A          280 NVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH---PEIKGQLVKLLS-VRLCPPVS  355 (498)
T ss_dssp             CBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC---HHHHHHHHHHHH-HSCCCCHH
T ss_pred             cccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC---HHHHHHHHHHHh-ccCCCCHH
Confidence            666532 11111            112478899999999 78999999998   45   788888877654 45677899


Q ss_pred             HHHHHHHHhcC---Cc----hH---HHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC----------CC
Q 015890          270 SQHLALYSLQT---GP----EW---VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK----------HL  329 (398)
Q Consensus       270 ~~~~~~~~l~~---~~----~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~  329 (398)
                      .|.++..+++.   ++    .+   ..+..+.+.++++.+.+.|++++++.+..+++++|+|+++...          ..
T Consensus       356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~  435 (498)
T 3ihj_A          356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQM  435 (498)
T ss_dssp             HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTS
T ss_pred             HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCC
Confidence            99998888863   11    22   3456678888999999999988667888889899999776421          12


Q ss_pred             ChHHH-HHHHHHhcCeEEecCCCCCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          330 DDFEV-VRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       330 ~~~~~-~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +..++ +.++++++||.+.||+.|+.   ++++|++++ ++++++++++++|.++++++.++
T Consensus       436 ~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~~  496 (498)
T 3ihj_A          436 APDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLEK  496 (498)
T ss_dssp             CHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence            34444 67788889999999999863   459999997 58999999999999999988754

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=7.2e-43  Score=331.04  Aligned_cols=360  Identities=18%  Similarity=0.156  Sum_probs=286.9

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHc--CCCeEEcCCc---cCCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015890            5 AKLAKRALETEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDAL   77 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~l~~g---~~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l   77 (398)
                      |++++|+...+.+.++.+.+...+  ++++++|+.|   ++...  +++.+.+++.+.+.+.....|++..|..++|+++
T Consensus        22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i  101 (420)
T 4f4e_A           22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASV  101 (420)
T ss_dssp             CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHH
T ss_pred             cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHH
Confidence            568888888887877777766643  4689999999   45544  4489999999988775567898889999999999


Q ss_pred             HHHHhhhcCC--CCC--cEEEecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCC
Q 015890           78 VKKLNQENKL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP  150 (398)
Q Consensus        78 ~~~l~~~~~~--~~~--~v~~~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  150 (398)
                      ++++....+.  +++  +|++|+|++++++.++  .+++++||+|+++.|+|.++...++..|.+++.+ +. +++++.+
T Consensus       102 a~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~  180 (420)
T 4f4e_A          102 QKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAY-PYYDAKTNGV  180 (420)
T ss_dssp             HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEE-ECEETTTTEE
T ss_pred             HHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEe-eeeccccCcc
Confidence            9999765442  567  8999999999999994  4667999999999999999999999999999999 76 4456788


Q ss_pred             ChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cc----cccCCc
Q 015890          151 DADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HC----CVEGDH  221 (398)
Q Consensus       151 d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~----~~~~~~  221 (398)
                      |++.+++.++.. +..+++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++..  ..    ....++
T Consensus       181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~  260 (420)
T 4f4e_A          181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN  260 (420)
T ss_dssp             CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence            999999999832 22488899999999999999999999999999999999999999  6665311  11    113578


Q ss_pred             EEEEcccccccCCCcceeEEEEc--cCCcHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERV  289 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~  289 (398)
                      ++++.|+||.+|++|+|+||++.  ++  +++++.    +.........+++...+.++..++...      .+++++.+
T Consensus       261 ~i~~~S~SK~~~~~G~RiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  338 (420)
T 4f4e_A          261 VFVSSSFSKSFSLYGERVGALSIITDS--KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR  338 (420)
T ss_dssp             EEEEEECTTTTTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCccCcCcCCCcEEEEEEcCC--HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            89999999999999999999864  32  555544    333323345567888888888888752      34577888


Q ss_pred             HHHHHHHHHHHHHhccC---CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCC
Q 015890          290 KDLVRNREIIREALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLV  366 (398)
Q Consensus       290 ~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~  366 (398)
                      +.++++++.+.+.|+++   +++.+..+.+++|+|+.++     . +.+.++++++||.+.|+.        |++++..+
T Consensus       339 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~-~~~~~~l~~~gI~v~~~~--------Ris~~~~~  404 (420)
T 4f4e_A          339 DRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----S-AQVDRLREEFGIYAVSTG--------RICVAALN  404 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----H-HHHHHHHHHHCEECCTTS--------EEEGGGCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----H-HHHHHHHHhCCEEecCCC--------eEEEecCC
Confidence            89999999999999886   3457777888999998774     2 445556678999999852        99998767


Q ss_pred             HHHHHHHHHHHHHHH
Q 015890          367 EDDCKAAADRLRRGL  381 (398)
Q Consensus       367 ~~~~~~~~~~l~~~~  381 (398)
                      ++++++++++|.+++
T Consensus       405 ~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          405 TRNLDVVANAIAAVL  419 (420)
T ss_dssp             TTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            788999999998875

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=2.9e-43  Score=328.85  Aligned_cols=323  Identities=19%  Similarity=0.287  Sum_probs=275.1

Q ss_pred             HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH
Q 015890           51 KVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF  130 (398)
Q Consensus        51 a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~  130 (398)
                      ++.+.+... ...|++..+..++++.+++++.   +++++++++++|+++|+..++.+++++||+|+++.|+|+++...+
T Consensus        47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~  122 (375)
T 3op7_A           47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT---GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP  122 (375)
T ss_dssp             HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS---SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH
T ss_pred             HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc---cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH
Confidence            444444443 4678888999999999999873   467889999999999999999999999999999999999999999


Q ss_pred             HhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--e
Q 015890          131 QMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--F  207 (398)
Q Consensus       131 ~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~  207 (398)
                      +..|.+++.+ +.+ ++++.+|++.|++++++++  ++|++++|+||||.++|.+++++|+++|++||+++|+||+|  +
T Consensus       123 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~  199 (375)
T 3op7_A          123 KSLGAEVDLW-QIEEENGWLPDLEKLRQLIRPTT--KMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF  199 (375)
T ss_dssp             HHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred             HHcCCEEEEE-eccccCCCCCCHHHHHHhhccCC--eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence            9999999988 765 4467789999999998654  99999999999999999999999999999999999999999  5


Q ss_pred             ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHH
Q 015890          208 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE  287 (398)
Q Consensus       208 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  287 (398)
                      .+.+........+++++++|+||.+|++|+|+||++++   +++++.+........++.+.+.+.++..+++..+.++++
T Consensus       200 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  276 (375)
T 3op7_A          200 SELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAAN---HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILER  276 (375)
T ss_dssp             SSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECC---HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred             cccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeC---HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHH
Confidence            54432222233577899999999999999999999997   899999988877777888899999998888864466778


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCH
Q 015890          288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE  367 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~  367 (398)
                      ..+.++++++.+.+.|++.+.+.+..+.++++.|+.++.. .+..+++.++++++||.+.||..|+.++++|++++. +.
T Consensus       277 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~  354 (375)
T 3op7_A          277 NRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC-EQ  354 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS-CH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC-CH
Confidence            8888899999999999887766777777777888887653 367888888877899999999988888999999997 56


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 015890          368 DDCKAAADRLRRGLEELV  385 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~~~~  385 (398)
                      +++++++++|.++++++.
T Consensus       355 ~~i~~~l~~l~~~l~~~~  372 (375)
T 3op7_A          355 ETLIKGLEKLSQFLRRFD  372 (375)
T ss_dssp             HHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            899999999999987654

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=9.2e-43  Score=330.23  Aligned_cols=340  Identities=16%  Similarity=0.172  Sum_probs=274.8

Q ss_pred             CCCeEEcCCccC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      |.++++|+.|.+     ++++++.+.+++.+.... ....|++..|..++++++++++.+.++.+ +++|++|+|+++++
T Consensus        37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al  115 (418)
T 3rq1_A           37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGI  115 (418)
T ss_dssp             GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred             CCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHH
Confidence            678999999975     778899999988764432 24578888899999999999997765422 22899999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCC-CCCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNP-GNPS  177 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p-~npt  177 (398)
                      ..++.+++++||+|+++.|+|.++...++..|.+++.+ +.+++++.+|++.+++.+++    ++ .+++++++| +|||
T Consensus       116 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~vi~~~p~~NPt  193 (418)
T 3rq1_A          116 HHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTY-SLFDEHNNFNHEAFQNRVNELAAKQT-NVVVIFNTPGNNPT  193 (418)
T ss_dssp             HHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CSBCTTSSBCHHHHHHHHHHHHHHCS-EEEEEEECSSCTTT
T ss_pred             HHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEE-eeeCCCCCcCHHHHHHHHHHhhccCC-CEEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999 87544467899999999975    44 247888899 9999


Q ss_pred             ccCCCHHHHHHHHHHHH------HcCCEEEEeece--eccCCCcc---ccc---cCCc--EEEEcccccccCCCcceeEE
Q 015890          178 GTYIPERLLKRISDLCK------AAGSWLVVDNTY--FMYDGRKH---CCV---EGDH--VVNLFSFSKAYGMMGWRVGY  241 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~------~~~~~livDe~~--~~~~~~~~---~~~---~~~~--~i~~~s~sK~~~~~G~r~G~  241 (398)
                      |.+++.+++++|+++|+      ++|+++|+||+|  +.+.+...   ...   ..++  +++++|+||.+|++|+|+||
T Consensus       194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  273 (418)
T 3rq1_A          194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGA  273 (418)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEE
T ss_pred             CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceE
Confidence            99999999999999999      899999999999  55543211   111   1233  58899999999999999999


Q ss_pred             EEc---cCCcHHHHHHHHHhhccC----CCCcchHHHHHHHHHhcCCc---hH---HHHHHHHHHHHHHHHHHHhccCCC
Q 015890          242 IAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       242 i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      +++   +   +++++.+.......    ..+.+.+++.++..+++...   .+   .++.++.++++++.+.+.|++++.
T Consensus       274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  350 (418)
T 3rq1_A          274 MIGISDD---EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGL  350 (418)
T ss_dssp             EEEEESS---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEeCC---HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            998   6   78888877654321    24578899999998887621   12   235567778888888888887754


Q ss_pred             CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       .+..+.+++|+|++++    +..++++.| .++||.+.||     ++++||+++..+++++++++++|.++++++.
T Consensus       351 -~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~  416 (418)
T 3rq1_A          351 -PMLPYRGGFFITIPTD----SANAICEEL-KKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLG  416 (418)
T ss_dssp             -CCCCCCSSSEEEEECT----THHHHHHHH-HHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred             -CCCCCCceEEEEcCCC----CHHHHHHHH-HhCCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence             7777888889998874    467777755 6899999997     4789999886689999999999999998764

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=1.3e-42  Score=330.11  Aligned_cols=347  Identities=22%  Similarity=0.330  Sum_probs=279.6

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcC----------CCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEe
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD----------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVT   95 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~   95 (398)
                      .++++|+.+.++++ ++.+.+++.+....          .....|++..|..++++++++++.+.++    +++++|+++
T Consensus        36 ~~~i~l~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~  114 (428)
T 1iay_A           36 NGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA  114 (428)
T ss_dssp             TSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred             Cceeeeccccchhh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence            46899999888876 56888888754310          0135687777899999999999988776    568899999


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-HhcCcEEEEeccCCC-CCCCCChHHHHHhhcc----CCCCeEEE
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVS  169 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~----~~~~~~v~  169 (398)
                      +|+++++..++.+++++||+|+++.|+|+++...+ +..|.+++.+ +.+. +++.+|++.+++.++.    ...+++|+
T Consensus       115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~  193 (428)
T 1iay_A          115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HCESSNNFKITSKAVKEAYENAQKSNIKVKGLI  193 (428)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEe-ecCCccCCcCCHHHHHHHHHHHHhcCCceEEEE
Confidence            99999999999999999999999999999987744 4679999998 7754 4677899999999873    22368999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-c--cc--c-------CCcEEEEcccccccCCC
Q 015890          170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-C--CV--E-------GDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       170 i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-~--~~--~-------~~~~i~~~s~sK~~~~~  235 (398)
                      +++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.+... .  ..  .       .++++++.|+||.+|++
T Consensus       194 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~  273 (428)
T 1iay_A          194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP  273 (428)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG
T ss_pred             EcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCC
Confidence            9999999999999999999999999999999999999  55554321 1  11  1       47889999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc---hHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+|+||+++++  +++++.+.....  .++.+.+++.++..+++...   +++++..+.+.++++.+.+.|++++. .+.
T Consensus       274 Glr~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~  348 (428)
T 1iay_A          274 GFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI-KCL  348 (428)
T ss_dssp             GGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CBC
T ss_pred             CceEEEEEeCC--HHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccc
Confidence            99999999853  678887776543  46788999999999998621   35677888888999999999988754 666


Q ss_pred             cCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+.+++|+|++++...     .+..++.++|++++||.+++|..|+.  ++++||+++..+++++++++++|++++++
T Consensus       349 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          349 KNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             CCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence            6767899999986421     12446778777556999999987754  57999999966899999999999988754

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=3.7e-42  Score=319.70  Aligned_cols=328  Identities=16%  Similarity=0.224  Sum_probs=273.2

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      .++++++||+.|.+++++||.+.+++.+.+..  ...| +..+..++++.+++++    ++++++|++|+|++++++.++
T Consensus        23 ~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~t~al~~~~   95 (361)
T 3ftb_A           23 FKGRELLDYSSNINPLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL----KLKDIGIVLGNGASEIIELSI   95 (361)
T ss_dssp             -----CEETTCCCCTTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH----TCCSCEEEEESSHHHHHHHHH
T ss_pred             cCCCCEEEecCCCCCCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHH
Confidence            46789999999999999999999999998866  4567 5677899999999998    677899999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .++    |+|+++.|+|+++...++..|.+++.+ +.++++ .++++++++.+++ +  ++|++++|+||||.+++.+++
T Consensus        96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~~~~l~~~l~~-~--~~v~i~~p~nptG~~~~~~~l  166 (361)
T 3ftb_A           96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFS-YLDENM-CIDYEDIISKIDD-V--DSVIIGNPNNPNGGLINKEKF  166 (361)
T ss_dssp             TTC----SEEEEEESCCTHHHHHHHHTTCEEEEE-ECCTTS-CCCHHHHHHHTTT-C--SEEEEETTBTTTTBCCCHHHH
T ss_pred             HHc----CcEEEecCChHHHHHHHHHcCCeEEEe-ecCccc-CCCHHHHHHhccC-C--CEEEEeCCCCCCCCCCCHHHH
Confidence            988    899999999999999999999999999 877553 4578999999987 4  999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCC-Cc--cccccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhc
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDG-RK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQD  260 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~-~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~l~~~~~  260 (398)
                      ++|+++|+++|+++|+||+|  +.++. ..  ......+++++++|+||.+|++|+|+||++ .+   +++++.+.....
T Consensus       167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~---~~~~~~~~~~~~  243 (361)
T 3ftb_A          167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN---KEIAAKIKAKQN  243 (361)
T ss_dssp             HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC---HHHHHHHHTTSC
T ss_pred             HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC---HHHHHHHHhhCC
Confidence            99999999999999999999  44431 11  111234678999999999999999999998 66   888888877655


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc-cccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                        +++.+.+.+.++.++++. .+++++..+++.++++++.+.|++++++. +..+. ++++++.++.  .+..++.+.|.
T Consensus       244 --~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~  317 (361)
T 3ftb_A          244 --PWNINCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPH-ANFVLCRLEN--ISGEKLYDSLL  317 (361)
T ss_dssp             --TTCSCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCS-SSEEEEEESS--SCHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCC-CeEEEEEcCC--CCHHHHHHHHH
Confidence              568899999999999985 67788899999999999999999887766 66565 7778888875  36778888886


Q ss_pred             HhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          340 HRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                       ++||.+++|..|+.  ++++|++++  +.++++++++.|.+..+
T Consensus       318 -~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          318 -KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             -TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred             -HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence             67999999998853  689999998  46677777777766554

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=3.6e-42  Score=320.14  Aligned_cols=331  Identities=18%  Similarity=0.241  Sum_probs=271.5

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +|++++||+.|.+++++++.+.+++.+.+..  ...|+ ..+..++++.+++++    ++++++|++++|+++++..++.
T Consensus        22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~----~~~~~~v~~~~g~~~al~~~~~   94 (364)
T 1lc5_A           22 SPDQLLDFSANINPLGMPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHH----QVPASWILAGNGETESIFTVAS   94 (364)
T ss_dssp             CGGGSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHH
T ss_pred             CccceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHH----CcCHHHEEECCCHHHHHHHHHH
Confidence            5678999999998888899999999998764  45674 457899999999998    6777899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ++  +||+|+++.|+|+++...++..|.+++.+ +.+. +++.+ ++.+.+.++++  +++|++++|+||||.++|.+++
T Consensus        95 ~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~-l~~~~~~~~~~--~~~v~i~~p~nptG~~~~~~~l  168 (364)
T 1lc5_A           95 GL--KPRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQL-TDAILEALTPD--LDCLFLCTPNNPTGLLPERPLL  168 (364)
T ss_dssp             HH--CCSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCC-CTTHHHHCCTT--CCEEEEESSCTTTCCCCCHHHH
T ss_pred             Hc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEE-eCCcccccch-hHHHHHhccCC--CCEEEEeCCCCCCCCCCCHHHH
Confidence            99  67999999999999999999999999998 7764 35544 56666666544  4899999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhcc
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~l~~~~~~  261 (398)
                      ++|+++|+++|+++|+||+|  +.+++.....  ...+++++++|+||.+|++|+|+||++ .+   +++++.+..... 
T Consensus       169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---~~~~~~l~~~~~-  244 (364)
T 1lc5_A          169 QAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQM-  244 (364)
T ss_dssp             HHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC---HHHHHHHHHHSC-
T ss_pred             HHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC---HHHHHHHHHhCC-
Confidence            99999999999999999999  5443322211  235678999999999999999999999 77   888888877654 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       +++.+.+.+.++.++|+. .+++++..+.++++++++.+.|++++++.+.++. ++|+++.++.   +..++...|. +
T Consensus       245 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~---~~~~l~~~l~-~  317 (364)
T 1lc5_A          245 -PWSVNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQRRLL-T  317 (364)
T ss_dssp             -TTCSCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC---TTCCHHHHHH-T
T ss_pred             -CCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC---cHHHHHHHHH-H
Confidence             567899999999999986 5678888889999999999999887655666544 7788888864   2446777775 7


Q ss_pred             cCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       342 ~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +||.+.+|..|.  .++++||+++.  .+++++++++|+++++++
T Consensus       318 ~gi~v~~g~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          318 QRILIRSCANYPGLDSRYYRVAIRS--AAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             TTEECEECTTSTTCCTTEEEEECCC--HHHHHHHHHHHHHHC---
T ss_pred             CCcEEeeCcccCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhhcc
Confidence            899999998875  36799999884  778888888888776654

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=8.2e-43  Score=328.59  Aligned_cols=339  Identities=22%  Similarity=0.324  Sum_probs=263.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecChHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g~t~a~  102 (398)
                      .++++++|+.|.++++++|.+.+++.+.+..    .....|++..+..++|+++++++.  ++ +++++|++++|+++++
T Consensus        31 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~~~~~~v~~~~G~~~al  108 (400)
T 3asa_A           31 PQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGFVDAKEIFISDGAKVDL  108 (400)
T ss_dssp             TTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTSSCGGGEEEESCHHHHH
T ss_pred             CCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCCCCHHHEEEccChHHHH
Confidence            4678999999999888899999999887743    124568777889999999999964  35 6788999999999999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ..++. ++++||+|+++.|+|+++...++..|.+ ++.+ +.+++ ++..|++.    + +  .+++|++++|+||||.+
T Consensus       109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~l~~----~-~--~~~~v~l~~p~nptG~~  179 (400)
T 3asa_A          109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIAL-PCLQENAFFPEFPE----D-T--HIDILCLCSPNNPTGTV  179 (400)
T ss_dssp             HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEE-ECCGGGTTCCCCCT----T-C--CCSEEEEESSCTTTCCC
T ss_pred             HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEec-ccchhcCcccChhh----c-c--CccEEEEeCCCCCCCCc
Confidence            98764 4578999999999999999999999998 8888 76543 34444332    1 2  35999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-ccccc--c--CCcEEEEcccccccCCCcceeEEEEccCCcHHH--
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--  251 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~--~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--  251 (398)
                      ++.+++++|+++|+++|+++|+||+|  +.+.+. +....  .  .+++++++|+||.+|++|+|+||+++++   ++  
T Consensus       180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~---~~~~  256 (400)
T 3asa_A          180 LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ---ELTY  256 (400)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT---TCBC
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh---hhcc
Confidence            99999999999999999999999999  555442 11221  1  3468999999999999999999999984   44  


Q ss_pred             -----HHHHHHhhccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee-C
Q 015890          252 -----ATQLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR-L  324 (398)
Q Consensus       252 -----~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~  324 (398)
                           ++.+....... ..+.+.+.+.++.++|+..  ++++..+.++++++.+.+.|++.+. .+..+.+++|+|+. +
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~  333 (400)
T 3asa_A          257 ADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLATGF-EVFGGEHAPYLWVKPT  333 (400)
T ss_dssp             TTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHTTC-EEEECSSSSEEEEECC
T ss_pred             chhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCCceEEEEecc
Confidence                 44443222112 2367899999998888753  5667778888899999999988754 67766678999999 7


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.. .+..+++.+|++++||.+.||..|+  .++++||++. .+++++++++++|.++++...
T Consensus       334 ~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l~~~~~~~~  394 (400)
T 3asa_A          334 QAN-ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERLQMAPALQS  394 (400)
T ss_dssp             CTT-CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHHHC------
T ss_pred             CCC-CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHHHHHHHhhh
Confidence            643 2455788888767799999998875  3678999965 489999999999999887654

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=5.6e-42  Score=326.46  Aligned_cols=349  Identities=21%  Similarity=0.322  Sum_probs=282.9

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-----------CCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEE
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-----------ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV   94 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~   94 (398)
                      ..+++|+.+.+++. ++.+.+++.+......           ...|++..|..++++++++++.+..+    +++++|++
T Consensus        38 ~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~  116 (435)
T 3piu_A           38 NGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVL  116 (435)
T ss_dssp             TSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEE
T ss_pred             CCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEE
Confidence            45888998877776 7788888877544211           14688888999999999999986544    56889999


Q ss_pred             ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHH-hcCcEEEEeccCCCC-CCCCChHHHHHhhcc----CCCCeEE
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSSK-TLHPDADWLEKTLET----KPTPKLV  168 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~----~~~~~~v  168 (398)
                      ++|+++++..++.+++++||.|+++.|+|.++...++ ..|.+++.+ +.+.+ ++.+|++.|++.+++    ...+++|
T Consensus       117 ~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v  195 (435)
T 3piu_A          117 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEEAYQEAEKRNLRVKGV  195 (435)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEe-eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence            9999999999999999999999999999999988777 789999998 77643 477899999999974    1236999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-----c---------CCcEEEEccccccc
Q 015890          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-----E---------GDHVVNLFSFSKAY  232 (398)
Q Consensus       169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-----~---------~~~~i~~~s~sK~~  232 (398)
                      ++++|+||||.+++.+++++|+++|++||+++|+||+|  +.+.+......     .         ++++++++|+||.+
T Consensus       196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~  275 (435)
T 3piu_A          196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  275 (435)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence            99999999999999999999999999999999999999  55655332111     1         46789999999999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---chHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |++|+|+||+++++  +.+.+.+.....  .++.+.+.+.++..+++..   .+++++.++++.++++.+.+.|++.+. 
T Consensus       276 g~~G~r~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-  350 (435)
T 3piu_A          276 GLPGFRVGAIYSND--DMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGI-  350 (435)
T ss_dssp             CCGGGCEEEEEESC--HHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             CCCceeEEEEEeCC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            99999999999964  667777765544  4566788888888888752   124567778888899999999988754 


Q ss_pred             ccccCCccEEEEeeCCCCCC-----ChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      .+..+.+++++|+.++....     +..+++.+|++++||.+.||..|+  .++++||+++..+++++++++++|.++++
T Consensus       351 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~  430 (435)
T 3piu_A          351 SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVG  430 (435)
T ss_dssp             EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence            77777877999999975321     245778888766699999998875  46899999986689999999999999998


Q ss_pred             HHh
Q 015890          383 ELV  385 (398)
Q Consensus       383 ~~~  385 (398)
                      ++.
T Consensus       431 ~~~  433 (435)
T 3piu_A          431 EYY  433 (435)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            764

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=5e-42  Score=324.56  Aligned_cols=359  Identities=18%  Similarity=0.151  Sum_probs=281.4

Q ss_pred             HhHHhhccCchHHHHHHHHHH--cCCCeEEcCCccC-CC----CCcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHH
Q 015890            7 LAKRALETEMPIMVQIQELVR--GAKNAVSLAQGVV-YW----QPPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALV   78 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~-~~----~~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~   78 (398)
                      +.+|+.....+.++.+.+...  .++++++|+.|.+ +.    .+++.+.+++.+ .+.....+.|++..+..++|+.++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia   83 (412)
T 1yaa_A            4 LFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA   83 (412)
T ss_dssp             TTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred             hhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence            345555555555555555554  3678999999974 22    467999999999 876444567888889999999999


Q ss_pred             HHHhhhcC--CCCCcEEE--ecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCC
Q 015890           79 KKLNQENK--LYKSSVMV--TAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPD  151 (398)
Q Consensus        79 ~~l~~~~~--~~~~~v~~--~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d  151 (398)
                      +++.+.++  +++++|++  |+|++++++.++  ..++.+||+|+++.|+|+++...++..|.+++.+ +. +++++.+|
T Consensus        84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d  162 (412)
T 1yaa_A           84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLD  162 (412)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEEC
T ss_pred             HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEE-eeecCCCCccC
Confidence            99976555  35789999  999999999884  3445699999999999999999999999999998 76 44456789


Q ss_pred             hHHHHHhhccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC---C--cccc--ccCC-
Q 015890          152 ADWLEKTLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG---R--KHCC--VEGD-  220 (398)
Q Consensus       152 ~e~l~~~l~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~---~--~~~~--~~~~-  220 (398)
                      ++.+++.++..+. ..++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++   .  +...  ...+ 
T Consensus       163 ~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (412)
T 1yaa_A          163 LNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST  242 (412)
T ss_dssp             HHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCC
Confidence            9999999975421 245555899999999999999999999999999999999999  55543   1  1111  1234 


Q ss_pred             --cEEEEcccccccCCCcceeEEEE--c-----cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------
Q 015890          221 --HVVNLFSFSKAYGMMGWRVGYIA--Y-----PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------  281 (398)
Q Consensus       221 --~~i~~~s~sK~~~~~G~r~G~i~--~-----~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------  281 (398)
                        ++++++|+||.+|++|+|+||++  +     +   ++    +++.+.........+++.+.+.++..+|+..      
T Consensus       243 ~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  319 (412)
T 1yaa_A          243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN---KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW  319 (412)
T ss_dssp             TCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred             CcceEEEeccCCCCCCcCCcceEEEEEecCCCCC---HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence              78999999999998899999998  7     4   55    7777766444444566889999999999863      


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeE
Q 015890          282 PEWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHL  358 (398)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~i  358 (398)
                      .+++++..+.++++++.+.+.|++++   .+.+..+.+++++|+.++     ...+ .++++++||.+.+        ++
T Consensus       320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~--------~~  385 (412)
T 1yaa_A          320 HKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT-----PQMV-KRLEETHAVYLVA--------SG  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCT--------TS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC-----HHHH-HHHHHhCCEEecc--------Cc
Confidence            24678888899999999999998876   357777777888887653     3344 6677789999986        57


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          359 RISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       359 Ri~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ||+++..+++++++++++|+++++.
T Consensus       386 Ris~~~~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          386 RASIAGLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             EEEEccCCHhHHHHHHHHHHHHHHh
Confidence            9999866789999999999988764

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=4.7e-41  Score=312.16  Aligned_cols=326  Identities=18%  Similarity=0.256  Sum_probs=267.8

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      +++++++|+.|.+++++||++.+++.+.+.+.  ....| +..+..++++.+++++    ++++++|++++|++++++.+
T Consensus        24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~lr~~la~~~----g~~~~~i~~t~g~~~al~~~   98 (360)
T 3hdo_A           24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIY-PSASSQKLREVAGELY----GFDPSWIIMANGSDEVLNNL   98 (360)
T ss_dssp             CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSC-CCSSCHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHH
T ss_pred             cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcC-CCCchHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence            56789999999999999999999999988763  14567 4456689999999998    57788999999999999999


Q ss_pred             HHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015890          106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       106 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                      +.+++++||+|+++.|+|+++...++..|.+++.+ +.+++ +.+  +++++.+  +  ++++++++|+||||.+++   
T Consensus        99 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~--~~l~~~~--~--~~~v~i~~p~nptG~~~~---  167 (360)
T 3hdo_A           99 IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTF-GLTGD-FRI--AGFPERY--E--GKVFFLTTPNAPLGPSFP---  167 (360)
T ss_dssp             HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEE-CBCTT-SSB--TTCCSSB--C--SSEEEEESSCTTTCCCCC---
T ss_pred             HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEe-eCCCC-CCH--HHHHhhc--C--CCEEEEeCCCCCCCCCcC---
Confidence            99999999999999999999999999999999999 77643 333  4443332  2  479999999999999999   


Q ss_pred             HHHHHHHHHHcCCEEEEeeceeccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          186 LKRISDLCKAAGSWLVVDNTYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      ++++.++|+++|+++|+||+|..+.+...  .....+++++++|+||.+|++|+|+||++++   +++++.+.....  .
T Consensus       168 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~  242 (360)
T 3hdo_A          168 LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR---PEVIAALDKIRD--H  242 (360)
T ss_dssp             HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC---HHHHHHHHHHSC--S
T ss_pred             HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeC---HHHHHHHHHhCC--C
Confidence            66777788899999999999932333211  1223578899999999999999999999998   889998877664  5


Q ss_pred             CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      ++.+.+.++++.++|+. .+++++..+.++++++++.+.|++++. .+..+. ++|+|+.++.  .+..++.+.|. ++|
T Consensus       243 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~--~~~~~l~~~l~-~~g  316 (360)
T 3hdo_A          243 YNLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIGY-DVIPSQ-GNYLFATPPD--RDGKRVYDGLY-ARK  316 (360)
T ss_dssp             CCSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-EECCCS-SSEEEEECTT--CCHHHHHHHHH-HTT
T ss_pred             CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEcCCC-ccEEEEECCC--CCHHHHHHHHH-HCC
Confidence            77899999999999986 677888999999999999999988843 665554 7788888763  35778888765 889


Q ss_pred             eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      |.++++.....++++||+++  +.+++++++++|++..+
T Consensus       317 i~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~  353 (360)
T 3hdo_A          317 VLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGE  353 (360)
T ss_dssp             EECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC
T ss_pred             EEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhc
Confidence            99999887666789999998  58888888888876653

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.9e-42  Score=326.04  Aligned_cols=353  Identities=16%  Similarity=0.130  Sum_probs=281.4

Q ss_pred             hHHHHHHHHHHcCCCeEEcCCccCCCCC---cHHHHHHH--HHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCC
Q 015890           17 PIMVQIQELVRGAKNAVSLAQGVVYWQP---PKMAMEKV--KELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYK   89 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~~~l~~g~~~~~~---~~~v~~a~--~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~   89 (398)
                      +..++..+. ......++|+.|.++...   ++.+.+++  .+.+.+.  ....|++..|..++|+++++++    ++++
T Consensus        21 ~~~~~~~~~-~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~~~~   95 (427)
T 3ppl_A           21 DIKRKFDEL-KSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----GVPV   95 (427)
T ss_dssp             HHHHHHHHH-HHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----TSCG
T ss_pred             HHHHHHHHh-hcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----CCCc
Confidence            334444433 344678999999876532   23566665  4544432  2578988889999999999998    6788


Q ss_pred             CcEEEecChHHHH--HHHHHHhcc--C----------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890           90 SSVMVTAGANQAF--VNIVLTLCD--A----------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL  155 (398)
Q Consensus        90 ~~v~~~~g~t~a~--~~~~~~l~~--~----------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  155 (398)
                      ++|++|+|+++++  +.++.++++  +          ||+|+++.|+|.++...++..|.+++.+ +.++++  +|++.|
T Consensus        96 ~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l  172 (427)
T 3ppl_A           96 EQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDG--PDMDAV  172 (427)
T ss_dssp             GGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEE-EEETTE--ECHHHH
T ss_pred             ceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEe-CCCCCC--CCHHHH
Confidence            9999999999999  588888877  6          8999999999999999999999999999 887664  799999


Q ss_pred             HHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEeece--eccCCCcc---cc-------ccCCc
Q 015890          156 EKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTY--FMYDGRKH---CC-------VEGDH  221 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~livDe~~--~~~~~~~~---~~-------~~~~~  221 (398)
                      ++.++... +++|++. +|+||||.+++.+++++|+++| +++|+++|+||+|  +.+.+...   ..       ...++
T Consensus       173 ~~~l~~~~-~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (427)
T 3ppl_A          173 EELVKNPQ-VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNR  251 (427)
T ss_dssp             HHHTTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTS
T ss_pred             HHHHhcCC-CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCc
Confidence            99995322 5888866 7899999999999999999999 9999999999999  55654321   11       13578


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-C--chHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVKDLVRNREI  298 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~  298 (398)
                      +++++|+||. +++|+|+||++++   +++++.+........++.+.+.|.++..+++. .  ..++++..+.++++++.
T Consensus       252 ~i~~~S~SK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  327 (427)
T 3ppl_A          252 FWAFTSTSKI-TLAGAGVSFFLTS---AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNK  327 (427)
T ss_dssp             EEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEechhhc-cCcCccEEEEEcC---HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999 5699999999999   88999888877766788899999999999986 2  24566777777777777


Q ss_pred             HHHHhcc----CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC-CCCC-----CCCeEEEEecCCCHH
Q 015890          299 IREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-GACG-----CRGHLRISFGGLVED  368 (398)
Q Consensus       299 l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g-~~~~-----~~~~iRi~~~~~~~~  368 (398)
                      +.+.|.+    ++.+.+..+.+++|+|++++..  +..++...+ .++||.++|| ..|.     .++++||+++..+++
T Consensus       328 l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~  404 (427)
T 3ppl_A          328 VLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE  404 (427)
T ss_dssp             HHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred             HHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence            7666643    4455667788899999999864  466777655 5899999994 4443     368999999877889


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 015890          369 DCKAAADRLRRGLEELV  385 (398)
Q Consensus       369 ~~~~~~~~l~~~~~~~~  385 (398)
                      ++++++++|.++++++.
T Consensus       405 ~i~~~~~~l~~~l~~~~  421 (427)
T 3ppl_A          405 ELEVAMDGVATCVLLAA  421 (427)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998765

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=7.8e-42  Score=323.75  Aligned_cols=349  Identities=19%  Similarity=0.258  Sum_probs=267.3

Q ss_pred             cCCCeEEcCCccCCCCCc--HHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890           28 GAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN   99 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~--~~v~~a~~~~~~~~~----~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t   99 (398)
                      .+.++++|+.|.+...++  +.+.+++.+.+.+..    ...|++..|..++|+++++++.+.++  +++++|++|+|++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t  108 (417)
T 3g7q_A           29 RTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQ  108 (417)
T ss_dssp             ---CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHH
T ss_pred             cCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcH
Confidence            347899999998876432  566666666654321    24798888999999999999987765  5688999999999


Q ss_pred             HHHHHHHHHhccCCC-----EEEEe-CCCCcChhhHHHhc------CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE
Q 015890          100 QAFVNIVLTLCDAGD-----SVVMF-APYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL  167 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd-----~Vl~~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~  167 (398)
                      ++++.++.+++++||     +|+++ .|+|+++...+...      +..+..+ +.+..++.+|++.++  ++++  +++
T Consensus       109 ~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~~~~--~~~  183 (417)
T 3g7q_A          109 SAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFEHLH--IGEE--TGM  183 (417)
T ss_dssp             HHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEE-GGGEEEEECCGGGCC--CCTT--EEE
T ss_pred             HHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCccccc-CCcccccccCHHHhc--cccC--ceE
Confidence            999999999999987     89997 99998887655322      3344444 433224567998888  5544  599


Q ss_pred             EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       168 v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      |++++|+||||.+++.+++++|+++|++||+++|+||+| ..+.+..   ......++++++.|+|| ++++|+|+||++
T Consensus       184 v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~  262 (417)
T 3g7q_A          184 ICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIII  262 (417)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEE
T ss_pred             EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEE
Confidence            999999999999999999999999999999999999999 3222211   11223568899999999 578999999999


Q ss_pred             ccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHHHHHHHHhcc-CCC--CccccCCcc
Q 015890          244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSP-LGE--GAVKGGEGA  317 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~~~~  317 (398)
                      .+   +++++.+........++.+.+.+.++..+++...  .+..+ ..+.++++++.+.+.|.+ ++.  +.+..+.++
T Consensus       263 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g  339 (417)
T 3g7q_A          263 AN---DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGA  339 (417)
T ss_dssp             CC---HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBS
T ss_pred             eC---HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcc
Confidence            98   8899998887777778889999999999998633  22233 455667777777777655 332  466677889


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +++|+.++....+..++...| .++||.+.||+.|..         ++++||+++. +++++++++++|.++++++.++
T Consensus       340 ~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~~~~  416 (417)
T 3g7q_A          340 IFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERAWRE  416 (417)
T ss_dssp             SEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHhc
Confidence            999999986334678888877 589999999998753         4689999997 9999999999999999887643

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=5.3e-42  Score=325.50  Aligned_cols=356  Identities=18%  Similarity=0.208  Sum_probs=282.8

Q ss_pred             chHHHHHHHHHHcCCCeEEcCCccCC---CCCcHHHHHHHH--HhhcCC-CCCCC-CCCCCcHHHHHHHHHHHhhhcCCC
Q 015890           16 MPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVK--ELVWDP-SISKY-GADEGLPELRDALVKKLNQENKLY   88 (398)
Q Consensus        16 ~~~~~~~~~~~~~g~~~~~l~~g~~~---~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~~~~~~~~~l~~~l~~~~~~~   88 (398)
                      .+.++++.+.. ...+.+||+.|.++   ++.|+.+.+++.  +.+... ....| ++..|..++|+.+++++    +++
T Consensus        12 ~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~----~~~   86 (423)
T 3ez1_A           12 DLARQAYEAFK-ARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL----DVK   86 (423)
T ss_dssp             HHHHHHHHHHH-HHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT----TSC
T ss_pred             HHHHHHHHHhh-cCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh----CCC
Confidence            34455554444 34678999999998   677888999885  544422 24679 78889999999999998    678


Q ss_pred             CCcEEEecChHHHHH--HHHHHhcc--C---------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890           89 KSSVMVTAGANQAFV--NIVLTLCD--A---------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL  155 (398)
Q Consensus        89 ~~~v~~~~g~t~a~~--~~~~~l~~--~---------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  155 (398)
                      +++|++|+|+++++.  .++.++++  +         ||+|+++.|+|+++...++..|.+++.+ +.++++  +|++.|
T Consensus        87 ~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l  163 (423)
T 3ez1_A           87 AENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAV  163 (423)
T ss_dssp             GGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE--ECHHHH
T ss_pred             hhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cCCCCC--CCHHHH
Confidence            889999999999998  88888887  7         5999999999999999999999999998 776654  799999


Q ss_pred             HHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEeece--eccCC-C--cc-cc-------ccCC
Q 015890          156 EKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTY--FMYDG-R--KH-CC-------VEGD  220 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~livDe~~--~~~~~-~--~~-~~-------~~~~  220 (398)
                      ++.++..+.+++|++. +|+||||.+++.+++++|+++| +++|+++|+||+|  +.+.+ .  .. ..       ...+
T Consensus       164 ~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (423)
T 3ez1_A          164 ERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPD  243 (423)
T ss_dssp             HHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTT
T ss_pred             HHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCC
Confidence            9999522235888765 8999999999999999999999 9999999999999  34433 1  11 11       1457


Q ss_pred             cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC--C--chHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--G--PEWVTERVKDLVRNR  296 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~~  296 (398)
                      ++++++|+||. +++|+|+||++.+   +++++.+........++.+.+.+.++..+++.  .  ..++++..+.+.+++
T Consensus       244 ~~i~~~S~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~  319 (423)
T 3ez1_A          244 RAFVFASTSKI-TFAGAGLGFVASS---EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKF  319 (423)
T ss_dssp             SEEEEEESTTT-SCSSSSCEEEEEC---HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCchhh-ccCCcceEEEEeC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence            89999999998 4699999999999   88999988887777888999999999998875  2  245566666666666


Q ss_pred             HHHHHHh----ccCC-CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec-CCCCC-----CCCeEEEEecCC
Q 015890          297 EIIREAL----SPLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGL  365 (398)
Q Consensus       297 ~~l~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~~~  365 (398)
                      +.+.+.|    ..++ .+.+..+.+++|+|+.++..  +..++... +.++||.++| |..|.     .++++||+++..
T Consensus       320 ~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~  396 (423)
T 3ez1_A          320 RAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKL-AEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP  396 (423)
T ss_dssp             HHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHH-HHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred             HHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHH-HHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence            6655554    4455 34666778899999999753  45556654 4689999999 65564     358999999866


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++++++|.++++++..
T Consensus       397 ~~~~i~~~~~~l~~~l~~~~~  417 (423)
T 3ez1_A          397 PVEEVRTAMQVVAACIRLATE  417 (423)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999988654

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=9.9e-41  Score=307.12  Aligned_cols=320  Identities=22%  Similarity=0.300  Sum_probs=261.5

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV  106 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~  106 (398)
                      ...+++++|+.+.++++++|.+.+++.+....  ...| +..+..++|+.+++++    ++++++|++++|+++++..++
T Consensus        13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~i~~t~G~~~~l~~~~   85 (337)
T 3p1t_A           13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHF----SCPEDNLMLVRGIDECFDRIS   85 (337)
T ss_dssp             -CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHH
Confidence            45678999999999999999999999998765  5667 5678899999999987    677889999999999999999


Q ss_pred             HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       107 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      .++  +||+|+++.|+|+++...++..|++++.+ +.++ ++.+|++.+++..  +  ++++++++|+||||.++|   +
T Consensus        86 ~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~--~--~~~v~i~~p~nptG~~~~---~  154 (337)
T 3p1t_A           86 AEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEI-GLTD-DLLLDPNDLAQVS--R--DDCVVLANPSNPTGQALS---A  154 (337)
T ss_dssp             HHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEE-CBCT-TSSBCHHHHTTCC--T--TEEEEEESSCTTTCCCCC---H
T ss_pred             Hhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEe-cCCC-CCCCCHHHHHhhc--C--CCEEEEeCCCCCCCCCCC---H
Confidence            998  89999999999999999999999999999 7764 4578999998862  3  499999999999999999   5


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      +++.++|++++. +|+||+|  +...+.. .....+++++++|+||.+|++|+|+||++++   +++++.+.....  .+
T Consensus       155 ~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~  227 (337)
T 3p1t_A          155 GELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAGLRLGALFGP---SELIAAMKRKQW--FC  227 (337)
T ss_dssp             HHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTTTCCEEEECC---HHHHHHHHTTSC--TT
T ss_pred             HHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcchheEEEEeC---HHHHHHHHhhcC--CC
Confidence            566667778886 6669999  4433321 2223467899999999999999999999999   788888876543  56


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCe
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV  344 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi  344 (398)
                      +.+.+.+.++..+++. .+++.+..+++.++++++.+.|++++. .+..+. +.|+++..+.    ..++...| .++||
T Consensus       228 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~----~~~~~~~l-~~~gi  299 (337)
T 3p1t_A          228 NVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGY-RVASSE-ANFVLVENAA----GERTLRFL-RERGI  299 (337)
T ss_dssp             CSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBCCCS-SSEEEEECTT----THHHHHHH-HHTTE
T ss_pred             CCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-EECCCC-CeEEEEEcCC----HHHHHHHH-HHCCe
Confidence            7888999999999985 445667777788888999999988854 666666 6677777653    34555544 68999


Q ss_pred             EEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          345 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       345 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      .+++|..|+.++++||+++  +++++++++++|++++
T Consensus       300 ~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          300 QVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS  334 (337)
T ss_dssp             ECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred             EEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHh
Confidence            9999999988899999998  4788888888887654

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=6.6e-46  Score=348.80  Aligned_cols=351  Identities=17%  Similarity=0.210  Sum_probs=287.7

Q ss_pred             HHHHcCC--CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChH
Q 015890           24 ELVRGAK--NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN   99 (398)
Q Consensus        24 ~~~~~g~--~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t   99 (398)
                      .|..+|+  ++++|+.|.+++++||.+.+++.+.+.+. ...|++.  ..++++.+++++.+.++  +++++|++++|++
T Consensus        23 ~~d~~g~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~   99 (392)
T 3b1d_A           23 KWKETETDPQLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVV   99 (392)
Confidence            4444556  89999999999999999999999988653 4567544  78899999999988777  5688999999999


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      +++..++.++.++||+|+++.|+|+++...++..|.+++.+ +.+ ++ ++.+|++.+++.++... +++|++++|+|||
T Consensus       100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~-~~~v~~~~~~npt  177 (392)
T 3b1d_A          100 PAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENGLFQIDFEQLENDIVEND-VKLYLLCNPHNPG  177 (392)
Confidence            99999999999999999999999999999999999998888 664 33 36689999999997322 5889999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cc-c--CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~-~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      |.+++.+++++|+++|+++|+++|+||+|  +.+++....   .. .  .++++++.|+||.+|++|+|+||+++++  +
T Consensus       178 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~  255 (392)
T 3b1d_A          178 GRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN--P  255 (392)
Confidence            99999999999999999999999999999  665542211   11 1  4678999999999999999999999874  4


Q ss_pred             HHHHHHHHhhccCC-CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKVQDNIP-ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      ++++.+......+. .+.+.+.+.++.++|+...+++++.++.+.++++.+.+.|++ ++++.+..+.+++++|++++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~  335 (392)
T 3b1d_A          256 TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY  335 (392)
Confidence            57787776655443 356888888888888764567788888899999999999987 6666777788778888888753


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ..+..++...|++++||.+.||..|+  .++++||+++. +++++++++++|.++++
T Consensus       336 ~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          336 GLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP  391 (392)
Confidence            22456778877667899999998886  45789999997 67899999999988764

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=3e-41  Score=319.20  Aligned_cols=358  Identities=16%  Similarity=0.149  Sum_probs=281.9

Q ss_pred             HHhhccCchHHHHHHHHHH--cCCCeEEcCCccC--C---CCCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHH
Q 015890            9 KRALETEMPIMVQIQELVR--GAKNAVSLAQGVV--Y---WQPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~--~g~~~~~l~~g~~--~---~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      +|+.....+.++++.+...  .++++++|+.|.+  .   ..+++.+.+++.+.+.+ ...+.|++..+..++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~   86 (412)
T 1ajs_A            7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL   86 (412)
T ss_dssp             TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred             hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHH
Confidence            4455555666777666655  3678999999984  2   24678999999888732 2356788888999999999999


Q ss_pred             HhhhcCC--CCCcEEE--ecChHHHHHHHHH--HhccCC-----CEEEEeCCCCcChhhHHHhcCcE-EEEeccCC-CCC
Q 015890           81 LNQENKL--YKSSVMV--TAGANQAFVNIVL--TLCDAG-----DSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS-SKT  147 (398)
Q Consensus        81 l~~~~~~--~~~~v~~--~~g~t~a~~~~~~--~l~~~g-----d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~-~~~  147 (398)
                      +...++.  ++++|++  |+|+++|++.++.  .++++|     |+|+++.|+|+++...++..|.+ ++.+ +.+ +++
T Consensus        87 ~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~  165 (412)
T 1ajs_A           87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY-RYWDTEK  165 (412)
T ss_dssp             HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEE-ECEETTT
T ss_pred             HhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEE-eeecCCC
Confidence            9654443  5789999  9999999999964  456789     99999999999999999999999 9988 763 245


Q ss_pred             CCCChHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC---Cc--cc--cc
Q 015890          148 LHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG---RK--HC--CV  217 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~---~~--~~--~~  217 (398)
                      +.+|++.+++.+++. ++.+++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+.+   ..  ..  ..
T Consensus       166 ~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~  245 (412)
T 1ajs_A          166 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS  245 (412)
T ss_dssp             TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             CccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc
Confidence            678999999998752 22478888999999999999999999999999999999999999  66654   21  11  11


Q ss_pred             cCCcEEEEcccccccCCCcceeEEEEc---cCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chH
Q 015890          218 EGDHVVNLFSFSKAYGMMGWRVGYIAY---PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEW  284 (398)
Q Consensus       218 ~~~~~i~~~s~sK~~~~~G~r~G~i~~---~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~  284 (398)
                      ..++++++.|+||.+|++|+|+||+++   +   ++    +++.+.........+++.+.+.++.++|+..      .++
T Consensus       246 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  322 (412)
T 1ajs_A          246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKE---PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN  322 (412)
T ss_dssp             TTCCEEEEEECTTTSCCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             cCCcEEEEEecccccCCCCcceEEEEEecCC---HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence            356789999999999988999999998   6   65    4444444333333446889999999999863      236


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEE
Q 015890          285 VTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS  361 (398)
Q Consensus       285 ~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~  361 (398)
                      +++..++++++++.+.+.|++++   .+.+..+.+++|+|+.++      .+++..+++++||.+.++        +|++
T Consensus       323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gv~v~~~--------~Ris  388 (412)
T 1ajs_A          323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPS--------GRIN  388 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTT--------SEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC------HHHHHHHHHhCCEEecCC--------cEEE
Confidence            77888899999999999998876   346667777899987664      356666777899999874        6999


Q ss_pred             ecCCCHHHHHHHHHHHHHHHHHH
Q 015890          362 FGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       362 ~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++..+++++++++++|+++++++
T Consensus       389 ~~~~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          389 MCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             GGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             eeeCCHHHHHHHHHHHHHHHHhc
Confidence            99657899999999999988753

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=2.5e-41  Score=318.18  Aligned_cols=351  Identities=19%  Similarity=0.132  Sum_probs=272.6

Q ss_pred             CchHHHHHHHHHHc--CCCeEEcCCc---cCCCC--CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890           15 EMPIMVQIQELVRG--AKNAVSLAQG---VVYWQ--PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus        15 ~~~~~~~~~~~~~~--g~~~~~l~~g---~~~~~--~~~~v~~a~~~-~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      ..+.++.+.+...+  .+++++|+.|   +++..  +++.+.+++.+ .+.+.....|++..|..++|+.+++++.+..+
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~   88 (397)
T 3fsl_A            9 AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADH   88 (397)
T ss_dssp             CCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTC
T ss_pred             CCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCc
Confidence            34444554444433  4679999999   44444  34899999999 88765567898888999999999999976544


Q ss_pred             C--CCC--cEEEecChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhh
Q 015890           87 L--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTL  159 (398)
Q Consensus        87 ~--~~~--~v~~~~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l  159 (398)
                      .  +++  +|++|+|++++++.++  .+++++||+|+++.|+|+++...++..|.+++.+ +. +++++.+|++.+++.+
T Consensus        89 ~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l  167 (397)
T 3fsl_A           89 PVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLATL  167 (397)
T ss_dssp             HHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEE-CCEETTTTEECHHHHHHHH
T ss_pred             ccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEE-eeeeccCCcCcHHHHHHHH
Confidence            2  577  8999999999999995  4567899999999999999999999999999999 76 2345678999999999


Q ss_pred             ccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-c-cc----cccCCcEEEEccccc
Q 015890          160 ETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-K-HC----CVEGDHVVNLFSFSK  230 (398)
Q Consensus       160 ~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~-~~----~~~~~~~i~~~s~sK  230 (398)
                      +.. +.++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++. . ..    ....+++++++|+||
T Consensus       168 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  247 (397)
T 3fsl_A          168 KTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSK  247 (397)
T ss_dssp             TTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTT
T ss_pred             HhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccc
Confidence            832 22488888999999999999999999999999999999999999  555421 1 11    123578999999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHHH----hhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHH
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~  300 (398)
                      .+|++|+|+||++++...+++++.+..    .......+++.+.+.++..++...      .+++++.++.++++++.+.
T Consensus       248 ~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~  327 (397)
T 3fsl_A          248 IFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELV  327 (397)
T ss_dssp             TTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999752111555554322    222234556788888888888752      3557788888999999999


Q ss_pred             HHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          301 EALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       301 ~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      +.|++++   ++.+..+.+++|+|+.++     . +.+.++++++||.+.||+        ||+++..+++++++++++|
T Consensus       328 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l  393 (397)
T 3fsl_A          328 KVLSTEMPERNFDYLLNQRGMFSYTGLS-----A-AQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAF  393 (397)
T ss_dssp             HHHHHHCTTSCCTHHHHCCSSEEECCCC-----H-HHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHH
T ss_pred             HHHHhcCCCCCceeecCCceEEEecCCC-----H-HHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHH
Confidence            9998764   457777777899998774     3 345556678999999874        9999876778899999999


Q ss_pred             HHH
Q 015890          378 RRG  380 (398)
Q Consensus       378 ~~~  380 (398)
                      +++
T Consensus       394 ~~~  396 (397)
T 3fsl_A          394 AAV  396 (397)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            875

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=2.8e-41  Score=322.57  Aligned_cols=350  Identities=19%  Similarity=0.254  Sum_probs=273.7

Q ss_pred             cCCCeE-EcCCccCCCCCc--HHHHHHHHHhhcC-------CC----CCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCc
Q 015890           28 GAKNAV-SLAQGVVYWQPP--KMAMEKVKELVWD-------PS----ISKYGADEGLPELRDALVKKLNQENK--LYKSS   91 (398)
Q Consensus        28 ~g~~~~-~l~~g~~~~~~~--~~v~~a~~~~~~~-------~~----~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~   91 (398)
                      ..++++ +|+.|.|...++  +.+.+++.+.+.+       ..    ...|++..+..++|+.+++++.+.++  +++++
T Consensus        29 ~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~  108 (444)
T 3if2_A           29 KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSEN  108 (444)
T ss_dssp             HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred             cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH
Confidence            347899 999998877422  4555666665554       21    25688888999999999999988765  46889


Q ss_pred             EEEecChHHHHHHHHHHhccCCC--------------EEEEe-CCCCcChhhH------HHhcCcEEEEeccCCC-C---
Q 015890           92 VMVTAGANQAFVNIVLTLCDAGD--------------SVVMF-APYYFNSYMS------FQMTGVTHILVGPCSS-K---  146 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l~~~gd--------------~Vl~~-~p~~~~~~~~------~~~~g~~~~~~~~~~~-~---  146 (398)
                      |++|+|++++++.++.+++++||              +|+++ .|+|+++...      +...|..++.+ +.+. +   
T Consensus       109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~  187 (444)
T 3if2_A          109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEV-THDGEEGFF  187 (444)
T ss_dssp             EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEE-EETTEEEEE
T ss_pred             EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEec-ccccccCcc
Confidence            99999999999999999998887              78876 9999888763      45567788877 6654 2   


Q ss_pred             CCCCChHHHHHh---hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccccC
Q 015890          147 TLHPDADWLEKT---LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCVEG  219 (398)
Q Consensus       147 ~~~~d~e~l~~~---l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~~~  219 (398)
                      ++.+|++.|++.   ++++  +++|++++|+||||.+++.+++++|+++|+++|+++|+||+| ..+.+..   ......
T Consensus       188 ~~~~d~~~l~~~l~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~  265 (444)
T 3if2_A          188 KYRVDFEALENLPALKEGR--IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD  265 (444)
T ss_dssp             EEECCHHHHHTCHHHHTTC--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred             ccCCCHHHHHHHHHhcCCC--ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence            256899999998   4444  599999999999999999999999999999999999999999 3222211   111235


Q ss_pred             CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHH-HHHHHHHHH
Q 015890          220 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNR  296 (398)
Q Consensus       220 ~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~  296 (398)
                      ++++++.|+||. +++|+|+||++.+   +++++.+........++.+.+.+.++..+++...  .+..+ ..+.+++++
T Consensus       266 ~~~i~~~S~sK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  341 (444)
T 3if2_A          266 NNTILCFSLSKI-GLPGMRTGIIVAD---AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQA  341 (444)
T ss_dssp             TTEEEEEESTTT-TCGGGCCEEEECC---HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHH
T ss_pred             CCEEEEechhhc-cCCCCceEEEEEC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence            688999999997 6799999999998   8888888877766677888999999999988632  22233 455666677


Q ss_pred             HHHHHHhcc-CCC--CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----------CCeEEEEec
Q 015890          297 EIIREALSP-LGE--GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFG  363 (398)
Q Consensus       297 ~~l~~~l~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----------~~~iRi~~~  363 (398)
                      +.+.+.|.+ ++.  +.+..+.+++++|+.++....+..+++..| .++||.+.||+.|..          .++|||+++
T Consensus       342 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~  420 (444)
T 3if2_A          342 TLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA  420 (444)
T ss_dssp             HHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS
T ss_pred             HHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEe
Confidence            777666654 332  255667779999999976334677888877 589999999998742          268999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhc
Q 015890          364 GLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       364 ~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      . +++++++++++|.++++++..
T Consensus       421 ~-~~e~i~~~l~~l~~~~~~~~~  442 (444)
T 3if2_A          421 A-DEQTLIDGIKVIGEVVRELYD  442 (444)
T ss_dssp             S-CHHHHHHHHHHHHHHHHHHHT
T ss_pred             C-CHHHHHHHHHHHHHHHHHHHc
Confidence            8 999999999999999988764

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=3.4e-41  Score=317.71  Aligned_cols=337  Identities=15%  Similarity=0.100  Sum_probs=264.6

Q ss_pred             CCeEEcCCccC-CCCC----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEE--ecChHH
Q 015890           30 KNAVSLAQGVV-YWQP----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMV--TAGANQ  100 (398)
Q Consensus        30 ~~~~~l~~g~~-~~~~----~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~g~t~  100 (398)
                      .+.++|+.|.+ +...    .+.+.+++.+...+.....|.+..|.+++|+++++++.+.++.  ++++|++  |+|+++
T Consensus        28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~  107 (401)
T 7aat_A           28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG  107 (401)
T ss_dssp             TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             CCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence            45899999986 4432    2467888777665434678988889999999999999876663  4889977  999999


Q ss_pred             HHHHHHHHhc---cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhcc-CCCCeEEEEeCCCC
Q 015890          101 AFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPTPKLVSVVNPGN  175 (398)
Q Consensus       101 a~~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~n  175 (398)
                      +++.++.++.   ++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.+++.++. .++++++++++|||
T Consensus       108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N  186 (401)
T 7aat_A          108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN  186 (401)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCT
T ss_pred             HHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEee-eeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence            9999887765   899999999999999999999999999998 764 33567899988877763 12358999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--c-c----cccCCcEEEEcccccccCCCcceeEEEEccC
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--H-C----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~-~----~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      |||.+++.+++++|+++|+++|+++|+||+|  +.+.+..  . .    ....+++++++|+||.||++|+|+||+++..
T Consensus       187 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~  266 (401)
T 7aat_A          187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVIC  266 (401)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEe
Confidence            9999999999999999999999999999999  6654421  1 1    1235788999999999999999999988621


Q ss_pred             CcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCC---CCcccc
Q 015890          247 EVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVKG  313 (398)
Q Consensus       247 ~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~  313 (398)
                      ..++    +...+.........+++...+.++..++...      .+++++.+++++++++++.+.|++++   .+.+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~  346 (401)
T 7aat_A          267 RDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT  346 (401)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec
Confidence            1145    4455555554455667777887777777652      34467778888999999999998774   246667


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      +.+++|+|+.++      .+.+..+++++||.+.++        +|++++..+++++++++++|++++
T Consensus       347 ~~~~~~~~~~~~------~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          347 DQIGMFCFTGLK------PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             HCCSSEEECCCC------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             CCcceEEecCCC------HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence            888899997664      345577778899999764        699999866777999999998765

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=7.1e-42  Score=332.26  Aligned_cols=346  Identities=18%  Similarity=0.243  Sum_probs=278.5

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhh-cC-CC---CCcEEEecChHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQE-NK-LY---KSSVMVTAGANQAFVN  104 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~-~~-~~---~~~v~~~~g~t~a~~~  104 (398)
                      ++++|+.|.+..+ +|.+++++.+.+..   ..|+ +..|..++++.+++++.+. .+ +.   +++|++|+|+++++..
T Consensus       104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~  179 (533)
T 3f6t_A          104 DAVNYCHTELGLN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY  179 (533)
T ss_dssp             HHHHHHHHTTCCC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH
T ss_pred             hheeccCCCCCcC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH
Confidence            4788999988886 67777776666654   2354 6789999999999999766 23 32   4689999999999999


Q ss_pred             HHHH-----hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC---CCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS---SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       105 ~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      ++.+     ++++||+|+++.|+|.++...++..|.+++.+ +.+   ++++.+|++.|++.++++  +++|++++|+||
T Consensus       180 ~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~d~~~l~~~l~~~--~k~v~l~~p~NP  256 (533)
T 3f6t_A          180 AFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEV-DLHSYEKNDWEIEPNEIEKLKDPS--IKALIVVNPTNP  256 (533)
T ss_dssp             HHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEE-CCCEETTTTSEECHHHHHHHSCTT--EEEEEEESSCTT
T ss_pred             HHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEE-EecCCcccCCCCCHHHHHHHhCCC--CeEEEEeCCCCC
Confidence            9998     78999999999999999999889999998888 765   355788999999999865  499999999999


Q ss_pred             CccCCCHHHHHHHHHHHH-HcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          177 SGTYIPERLLKRISDLCK-AAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~-~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      ||.+++.+++++|+++|+ ++|+++|+||+|  +.++.........+++++++|+||.+|++|+|+||+++++.  .+++
T Consensus       257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~--~~~~  334 (533)
T 3f6t_A          257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK--NVFD  334 (533)
T ss_dssp             TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESS--CHHH
T ss_pred             CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcH--HHHH
Confidence            999999999999999999 689999999999  55543333333356889999999999999999999999852  2222


Q ss_pred             HH------------------------------------HHhhccCCCCcchHHHHH----HHHHhc------CCchHHHH
Q 015890          254 QL------------------------------------LKVQDNIPICASIISQHL----ALYSLQ------TGPEWVTE  287 (398)
Q Consensus       254 ~l------------------------------------~~~~~~~~~~~~~~~~~~----~~~~l~------~~~~~~~~  287 (398)
                      .+                                    .........+.+.+.|.+    +..+|.      ....++++
T Consensus       335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~  414 (533)
T 3f6t_A          335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDI  414 (533)
T ss_dssp             HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHH
T ss_pred             HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHH
Confidence            22                                    223334456778888887    455564      23477888


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCC
Q 015890          288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGAC  352 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~  352 (398)
                      .++.++++++.+.+.|. .+. .+..+.+++|+|++++..               ..+..+++.++++++||.+.||+.|
T Consensus       415 ~~~~~~~r~~~l~~~L~-~~~-~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f  492 (533)
T 3f6t_A          415 ARKLVSERYDQLHDAMQ-APK-DETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGF  492 (533)
T ss_dssp             HHHHHHHHHHHHHHHHT-CCC-CCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEE
T ss_pred             HHHHHHHHHHHHHHhcC-CCc-cccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCccc
Confidence            99999999999999997 664 666788899999988531               0246678888888899999999988


Q ss_pred             CC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          353 GC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       353 ~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +. ++++|+|++..+++++++++++|.++++++.+.
T Consensus       493 ~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~  528 (533)
T 3f6t_A          493 GAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE  528 (533)
T ss_dssp             CSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            75 689999998778999999999999999887653

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=4.8e-41  Score=310.88  Aligned_cols=322  Identities=19%  Similarity=0.248  Sum_probs=257.2

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +|++++||+.|.++++++|++.+++.+.+..  ...|+...+ .++|+.+++++    ++++++|++|+|+++++..++.
T Consensus        13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~g~~~al~~~~~   85 (350)
T 3fkd_A           13 LSSEIVNFSTTVWTDGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN----SVDNNAILVTNGPTAAFYQIAQ   85 (350)
T ss_dssp             ---CCEECSCCSCCCSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT----TCCGGGEEEESHHHHHHHHHHH
T ss_pred             ccccEEEccCCCCCCCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence            5689999999999999999999999998743  567865555 88999999887    6788899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ++.  ||+|+++.|+|.++...++..|.+++.+ +. ++.+ .+++        ++  +++|++++|+||||.+++.+++
T Consensus        86 ~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~~--------~~--~~~v~i~~p~nptG~~~~~~~l  151 (350)
T 3fkd_A           86 AFR--GSRSLIAIPSFAEYEDACRMYEHEVCFY-PSNEDIG-EADF--------SN--MDFCWLCNPNNPDGRLLQRTEI  151 (350)
T ss_dssp             HTT--TCEEEEEESCCHHHHHHHHHTTCEEEEE-ETTSCGG-GSCC--------TT--CSEEEEESSCTTTCCCCCHHHH
T ss_pred             HHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEE-ecCCccc-cCcc--------CC--CCEEEEeCCCCCcCCCCCHHHH
Confidence            998  9999999999999999999999999999 77 5422 2232        23  5999999999999999998888


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      .+|+++|+++  ++|+||+|  +.+.+...  .....+++++++|+||.+|++|+|+||++++   +++++.+.....  
T Consensus       152 ~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~--  224 (350)
T 3fkd_A          152 LRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN---KDFMKRVAAFST--  224 (350)
T ss_dssp             HHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC---HHHHHHHHTTCC--
T ss_pred             HHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeC---HHHHHHHHHhCC--
Confidence            8888877655  99999999  55544322  2223578899999999999999999999997   899998887664  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +++.+.+.+.++..+|+....+.++..+.. ++++++.+.|++++++.+.++. ++|+|+.++..  +..++.++|++++
T Consensus       225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~L~~~~  300 (350)
T 3fkd_A          225 PWAVNALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKKYMLEEY  300 (350)
T ss_dssp             TTCSCHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS--CHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC--CHHHHHHHHHHHC
Confidence            567899999999999986443444443333 7888888989887665665554 77888888754  6788888887449


Q ss_pred             CeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       343 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ||.+++|..|+.  ++++||+++  +.+++++++++|++..++
T Consensus       301 gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          301 NMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             CEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence            999999998864  689999998  467777777777766543

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=6.1e-41  Score=319.98  Aligned_cols=359  Identities=16%  Similarity=0.157  Sum_probs=277.8

Q ss_pred             hHhHHhhccCch-HHHHHHHHHHcCCC-eEEcCCccC-CCCC----cHHHHHHHHHhh--cCCCCCCCCCCCCcHHHHHH
Q 015890            6 KLAKRALETEMP-IMVQIQELVRGAKN-AVSLAQGVV-YWQP----PKMAMEKVKELV--WDPSISKYGADEGLPELRDA   76 (398)
Q Consensus         6 ~~~~~~~~~~~~-~~~~~~~~~~~g~~-~~~l~~g~~-~~~~----~~~v~~a~~~~~--~~~~~~~y~~~~~~~~~~~~   76 (398)
                      ++..++...+.. .+....+..+++++ .++|+.|.+ +...    .+.+.+++.+..  .......|.+..|..++|++
T Consensus        23 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~  102 (448)
T 3meb_A           23 SVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA  102 (448)
T ss_dssp             CTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred             hHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence            444555554443 34444444445544 799999987 5543    355566544443  22346789888999999999


Q ss_pred             HHHHHhhhcCCC-----CCcEEE--ecChHHHHHH--HHHHhccCCCEEEEeCCCCcChhhHHH----hcCcEEEEeccC
Q 015890           77 LVKKLNQENKLY-----KSSVMV--TAGANQAFVN--IVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC  143 (398)
Q Consensus        77 l~~~l~~~~~~~-----~~~v~~--~~g~t~a~~~--~~~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~  143 (398)
                      +++++.   +.+     +++|++  |+|++++++.  .+.+++.+||+|+++.|+|.++...++    ..|.+++.+ +.
T Consensus       103 ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~-~~  178 (448)
T 3meb_A          103 AQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY-TY  178 (448)
T ss_dssp             HHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE-CC
T ss_pred             HHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE-ec
Confidence            999983   444     689999  9999999988  555677899999999999999999999    999999999 77


Q ss_pred             -CCC-CCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCc---c-
Q 015890          144 -SSK-TLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK---H-  214 (398)
Q Consensus       144 -~~~-~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~---~-  214 (398)
                       +++ ++.+|+|.+++.++..+ ..+++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++..   . 
T Consensus       179 ~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~  258 (448)
T 3meb_A          179 LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFA  258 (448)
T ss_dssp             BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred             cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchh
Confidence             655 57899999999998421 2477888899999999999999999999999999999999999  6654411   1 


Q ss_pred             ---ccccCCcEEEEcccccccCCCcceeEEE--Ec--------cCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHH
Q 015890          215 ---CCVEGDHVVNLFSFSKAYGMMGWRVGYI--AY--------PSEVE----GFATQLLKVQDNIPICASIISQHLALYS  277 (398)
Q Consensus       215 ---~~~~~~~~i~~~s~sK~~~~~G~r~G~i--~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~  277 (398)
                         .....++++++.|+||.||++|+|+||+  ++        ++  +    ++++.+.........+++.+.+.++..+
T Consensus       259 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~  336 (448)
T 3meb_A          259 VRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKN--KALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVI  336 (448)
T ss_dssp             HHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred             HHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCC--HHHHHHHHHHHHHHHhcccCCccHHHHHHHHHH
Confidence               1123567899999999999999999998  66        42  4    5666666655555667888999999999


Q ss_pred             hcCCc------hHHHHHHHHHHHHHHHHHHHhccCC--C------CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          278 LQTGP------EWVTERVKDLVRNREIIREALSPLG--E------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       278 l~~~~------~~~~~~~~~~~~~~~~l~~~l~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      |....      +.+++.++++.++++.+.+.|++++  .      +.+..+.+++|.|+.++      .+++..+++++|
T Consensus       337 l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~g  410 (448)
T 3meb_A          337 VHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT------PEHVDYLKEKWS  410 (448)
T ss_dssp             HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC------HHHHHHHHHHHC
T ss_pred             hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC------HHHHHHHHHhCC
Confidence            87632      3367778888999999999998763  3      45667788899998774      367777878899


Q ss_pred             eEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      |++.||+       .|||++..+++++++++++|.++++.
T Consensus       411 V~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          411 IYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             EEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             EEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence            9999975       29999876778899999999999874

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=3.4e-41  Score=317.19  Aligned_cols=336  Identities=15%  Similarity=0.142  Sum_probs=262.7

Q ss_pred             cCCCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEE--ecCh
Q 015890           28 GAKNAVSLAQGV---VY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMV--TAGA   98 (398)
Q Consensus        28 ~g~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~--~~g~   98 (398)
                      .++++++|+.|.   +.  .+++|.+.+++.+.+.+...+.|++..+..++|+++++++.+..+  +++++|++  ++|+
T Consensus        24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~  103 (396)
T 2q7w_A           24 ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGG  103 (396)
T ss_dssp             ----CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHH
T ss_pred             CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccc
Confidence            356899999998   22  246799999998876543456798888999999999999965433  34788998  9999


Q ss_pred             HHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCC-CCeEEEEeCCC
Q 015890           99 NQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKP-TPKLVSVVNPG  174 (398)
Q Consensus        99 t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~  174 (398)
                      +++++.++..+.  .+||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.+++.++..+ ..+++++++|+
T Consensus       104 ~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~  182 (396)
T 2q7w_A          104 TGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCH  182 (396)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSC
T ss_pred             hhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEE-ecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            999999998764  689999999999999999999999999988 7642 346789999999997532 24778889999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--C--ccc--cccCCcEEEEcccccccCCCcceeEEEEc--
Q 015890          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--R--KHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--  244 (398)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~--~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~--  244 (398)
                      ||||.+++.+++++|+++|+++|+++|+||+|  +.+++  .  ...  ...++++++++|+||.+|++|+|+||+++  
T Consensus       183 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~  262 (396)
T 2q7w_A          183 NPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVA  262 (396)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEc
Confidence            99999999999999999999999999999999  55532  1  111  11246889999999999999999999986  


Q ss_pred             cCCcH----HHHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCC---CCcc
Q 015890          245 PSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAV  311 (398)
Q Consensus       245 ~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~  311 (398)
                      ++  +    ++++.+.........+.+.+.+.++.++|+..      .+++++..+.++++++.+.+.|++++   .+.+
T Consensus       263 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  340 (396)
T 2q7w_A          263 AD--SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSF  340 (396)
T ss_dssp             SS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTH
T ss_pred             CC--HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcce
Confidence            32  4    34454444333334455889999999998763      24677778888999999999998876   3577


Q ss_pred             ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          312 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ..+.+++|+|+.++     . +.+..+++++||.+.++        +||+++..+++++++++++|+++
T Consensus       341 ~~~~~~~~~~~~~~-----~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          341 IIKQNGMFSFSGLT-----K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             HHHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             ecCCCceEEEecCC-----H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence            77777889888764     2 44556667899999874        69999966789999999999875

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=8.5e-41  Score=315.76  Aligned_cols=357  Identities=15%  Similarity=0.101  Sum_probs=269.2

Q ss_pred             HhHHhhccCch-HHHHHHHHHH-cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            7 LAKRALETEMP-IMVQIQELVR-GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         7 ~~~~~~~~~~~-~~~~~~~~~~-~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      ...|+...+.+ .+....+..+ ...+.++|+.|.+ +...++.+.+++.++.. .....|++..|..++|+++++++..
T Consensus        16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~ia~~~~~   94 (409)
T 4eu1_A           16 TQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEAQKLCFG   94 (409)
T ss_dssp             -----------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHHHHHHHC
T ss_pred             HhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHHHHHHcC
Confidence            34566654444 3333333333 3467999999997 77778888898888733 3367898889999999999999843


Q ss_pred             hcCC--CCCcEE--EecChHHHHHHHH---HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHH
Q 015890           84 ENKL--YKSSVM--VTAGANQAFVNIV---LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL  155 (398)
Q Consensus        84 ~~~~--~~~~v~--~~~g~t~a~~~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l  155 (398)
                      ..+.  ++++|.  .+.|+++++..+.   .+++++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.+
T Consensus        95 ~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l  173 (409)
T 4eu1_A           95 PTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPY-SYYDPATKGLNLAGM  173 (409)
T ss_dssp             SSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEE-CCEETTTTEECHHHH
T ss_pred             CCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEE-EeecCcCCcCcHHHH
Confidence            2221  167774  4889999998764   4456889999999999999999999999999999 763 45678899999


Q ss_pred             HHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-----ccc--cccCCcEEEE
Q 015890          156 EKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-----KHC--CVEGDHVVNL  225 (398)
Q Consensus       156 ~~~l~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-----~~~--~~~~~~~i~~  225 (398)
                      ++.++.. ...+++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++.     ...  ....++++++
T Consensus       174 ~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~  253 (409)
T 4eu1_A          174 LECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVA  253 (409)
T ss_dssp             HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEE
T ss_pred             HHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEE
Confidence            9999732 22467777899999999999999999999999999999999999  665541     111  1234678999


Q ss_pred             cccccccCCCcceeEEE--EccCCcHH----HHHHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYI--AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLV  293 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~  293 (398)
                      +|+||.+|++|+|+||+  +..+  ++    +++.+.........+++.+.+.++..+++..      .+.+++.++.+.
T Consensus       254 ~S~SK~~g~~G~riG~~~~v~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  331 (409)
T 4eu1_A          254 QSFSKNFGLYGHRCGALHISTAS--AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIA  331 (409)
T ss_dssp             EECTTTSSCGGGCCEEEEEECSS--HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcccccCccCCceEEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999997  5553  66    6666665554455677889999999988863      234677788899


Q ss_pred             HHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHH
Q 015890          294 RNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC  370 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~  370 (398)
                      ++++.+.+.|++++.   +.+..+.+++|+|+.++      .+++.++++++||.+.|+        .||+++..+++++
T Consensus       332 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gv~v~p~--------~Ri~~~~~~~~~i  397 (409)
T 4eu1_A          332 EVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT------REQVELLRSEYHIYMTLN--------GRAAVSGLNSTNV  397 (409)
T ss_dssp             HHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTH
T ss_pred             HHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC------HHHHHHHHHcCCEEEcCC--------CEEEEEecCHhhH
Confidence            999999999988763   46667788899986653      356777887889999986        3899988777889


Q ss_pred             HHHHHHHHHHH
Q 015890          371 KAAADRLRRGL  381 (398)
Q Consensus       371 ~~~~~~l~~~~  381 (398)
                      ++++++|.+++
T Consensus       398 ~~~~~~l~~~l  408 (409)
T 4eu1_A          398 EYVSQAIHNVT  408 (409)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998765

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=1.2e-39  Score=303.74  Aligned_cols=326  Identities=21%  Similarity=0.310  Sum_probs=265.0

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcC--CCCCcEEEecChHHHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      .+||+.|.++++++|++.+++.+.+.+.  ....|+...+ .++++.+++++++.+|  +++++|++++|++++++.++.
T Consensus        32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~  110 (369)
T 3cq5_A           32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ  110 (369)
T ss_dssp             SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred             ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence            4899999999889999999999887541  2456755545 7999999999988754  467899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      +++++||+|+++.|+|+++...++..|.+++.+ +.++ ++.+|++.+++.+++ +  +++|++++|+||||.++|   +
T Consensus       111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---~  183 (369)
T 3cq5_A          111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAV-SRGA-DFRIDMDVALEEIRAKQ--PDIVFVTTPNNPTGDVTS---L  183 (369)
T ss_dssp             HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEE-ECCT-TSSCCHHHHHHHHHHHC--CSEEEEESSCTTTCCCCC---H
T ss_pred             HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCc-CCCCCHHHHHHHhhccC--CCEEEEeCCCCCCCCCCC---H
Confidence            999999999999999999999999999999998 7653 457899999999986 4  489999999999999999   5


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCCcccc-ccCC-cEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-VEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-~~~~-~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      +++.++|+.+++++|+||+|  +.+....... ...+ ++++++|+||.+|++|+|+||++++   +++++.+.....  
T Consensus       184 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~--  258 (369)
T 3cq5_A          184 DDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN---PAFIDAVMLVRL--  258 (369)
T ss_dssp             HHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC---THHHHHHHTTSC--
T ss_pred             HHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC---HHHHHHHHHcCC--
Confidence            55555556667999999999  4432111111 2235 7899999999999899999999998   678888876554  


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      +++.+.+.+.++..+++. .+++++..+.++++++++.+.|++.+. .+.++. ++|+|+.++   .+..++.++| .++
T Consensus       259 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~---~~~~~l~~~l-~~~  331 (369)
T 3cq5_A          259 PYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEELGY-AVVPSE-SNFVFFGDF---SDQHAAWQAF-LDR  331 (369)
T ss_dssp             TTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHHTC-EEECCS-SSEEEEECC---SSHHHHHHHH-HHT
T ss_pred             CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-EECCCC-CeEEEEECC---CCHHHHHHHH-HHC
Confidence            467889999999999986 567788888899999999999887553 555444 778888886   2567788877 489


Q ss_pred             CeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       343 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ||.+.+|   +.++++|++++  +++++++++++|.++++
T Consensus       332 gi~v~~~---~~~~~iRis~~--~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          332 GVLIRDV---GIAGHLRTTIG--VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             TEECBCC---SCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEC---CCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            9999998   24689999998  58889999999887753

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.2e-40  Score=323.58  Aligned_cols=345  Identities=19%  Similarity=0.276  Sum_probs=266.1

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-hhhcCC-----CCCcEEEecChHHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENKL-----YKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l-~~~~~~-----~~~~v~~~~g~t~a~~~~  105 (398)
                      +++|+.|.+.+ +++.+.+++.+.+..   ..|++..|..++++.+++++ .+.++.     ++++|++|+|+++++..+
T Consensus       106 ~i~l~~g~~~~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~  181 (546)
T 2zy4_A          106 SLSYVRDQLGL-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYI  181 (546)
T ss_dssp             HHHHHHHTSCC-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHH
T ss_pred             hhecccCCCCC-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHH
Confidence            78999998877 467777777776642   57988888999998877654 454432     357999999999999999


Q ss_pred             HHH-----hccCCCEEEEeCCCCcChhhHHHh--cCcEEEEeccCCCC-CCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          106 VLT-----LCDAGDSVVMFAPYYFNSYMSFQM--TGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       106 ~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      +.+     ++++||+|+++.|+|+++...+..  .|++++.+ +.+++ ++.+|++.|++.++.+  +++|++++|+|||
T Consensus       182 ~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~--~k~v~l~~p~NPt  258 (546)
T 2zy4_A          182 FESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAI-NADPSLNWQYPDSELDKLKDPA--IKIFFCVNPSNPP  258 (546)
T ss_dssp             HHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEE-ECBGGGTTBCCHHHHGGGGSTT--EEEEEEESSCSSS
T ss_pred             HHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEE-ecCcccCCCCCHHHHHHhhCCC--CeEEEEECCCCCC
Confidence            988     478999999999999999887554  46888888 76544 5789999999987654  5999999999999


Q ss_pred             ccCCCHHHHHHHHHHH--HHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          178 GTYIPERLLKRISDLC--KAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~--~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      |.+++.+++++|+++|  +++|+++|+||+|  +.++.........+++++++|+||.+|++|+|+||+++++  +++++
T Consensus       259 G~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~~l~~  336 (546)
T 2zy4_A          259 SVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQ--QNVFD  336 (546)
T ss_dssp             CBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEES--SCHHH
T ss_pred             CccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECC--HHHHH
Confidence            9999999999999999  7899999999999  4433222222223689999999999999999999999884  23555


Q ss_pred             HHHHh-------------h-----------------------ccCCCCcchHHHHHH-----HHHhcCCchHHHHHHHHH
Q 015890          254 QLLKV-------------Q-----------------------DNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL  292 (398)
Q Consensus       254 ~l~~~-------------~-----------------------~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~  292 (398)
                      .+...             .                       .....+.+.+.|.++     .++++..+.+.++.++.+
T Consensus       337 ~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~  416 (546)
T 2zy4_A          337 LALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLI  416 (546)
T ss_dssp             HHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred             HHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence            55211             0                       022345677777764     244554567788888889


Q ss_pred             HHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC---------------CCChHHHHHHHHHhcCeEEecCCCCCC-CC
Q 015890          293 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG  356 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~  356 (398)
                      +++++.+.+.|. .+. .+..+.+++|+|++++..               ..++.+++.+++.++||.+.||+.|+. ++
T Consensus       417 ~~r~~~l~~~L~-~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~  494 (546)
T 2zy4_A          417 RRRETTLYRELG-MPP-LRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRP  494 (546)
T ss_dssp             HHHHHHHHGGGT-SSC-CCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSC
T ss_pred             HHHHHHHHHhcC-CCc-ccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCC
Confidence            999999999886 443 445677788999987520               013445566677899999999999864 56


Q ss_pred             eEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          357 HLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       357 ~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      ++||+++.++++++++++++|+++++++.++
T Consensus       495 ~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~  525 (546)
T 2zy4_A          495 SGRASLANLNEYEYAAIGRALRKMADELYAE  525 (546)
T ss_dssp             EEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999778899999999999999887643

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2.3e-40  Score=311.31  Aligned_cols=350  Identities=14%  Similarity=0.125  Sum_probs=268.8

Q ss_pred             ccCchHHHHHHHHHH--cCCCeEEcCCccC---C--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc
Q 015890           13 ETEMPIMVQIQELVR--GAKNAVSLAQGVV---Y--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus        13 ~~~~~~~~~~~~~~~--~g~~~~~l~~g~~---~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~   85 (398)
                      ....+.++.+.+...  .++++++|+.|.+   .  ..+++.+.+++.+.+.+.....|++..+..++|+++++++... 
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-   85 (394)
T 2ay1_A            7 PQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-   85 (394)
T ss_dssp             CCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-
T ss_pred             cCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-
Confidence            333344444443333  3578999999984   2  2567999999988765434667988889999999999998432 


Q ss_pred             CCCCCcEEE--ecChHHHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890           86 KLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (398)
Q Consensus        86 ~~~~~~v~~--~~g~t~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~  160 (398)
                      +.++++|++  ++|+++|++.++.++..  +||+|+++.|+|+++...++..|.+++.+ +.+. +++.+|++.+++.++
T Consensus        86 ~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~  164 (394)
T 2ay1_A           86 GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADLA  164 (394)
T ss_dssp             GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHHH
T ss_pred             CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEE-ecccccCCccCHHHHHHHHH
Confidence            236789999  99999999999988764  89999999999999999999999999988 7642 346789999999997


Q ss_pred             cCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--C--ccc--cccCCcEEEEcccccc
Q 015890          161 TKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--R--KHC--CVEGDHVVNLFSFSKA  231 (398)
Q Consensus       161 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~--~~~--~~~~~~~i~~~s~sK~  231 (398)
                      ..+ ..+++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++  .  ...  ....+++++++|+||.
T Consensus       165 ~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  244 (394)
T 2ay1_A          165 AAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKN  244 (394)
T ss_dssp             TCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTT
T ss_pred             hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCC
Confidence            542 2367777899999999999999999999999999999999999  55432  1  111  1124678999999999


Q ss_pred             cCCCcceeEEEEc--cCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHH
Q 015890          232 YGMMGWRVGYIAY--PSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREII  299 (398)
Q Consensus       232 ~~~~G~r~G~i~~--~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l  299 (398)
                      +|++|+|+||+++  ++  +++++.+    .........+++.+.+.++.++|+..      .+++++..+.++++++.+
T Consensus       245 ~~~~G~riG~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  322 (394)
T 2ay1_A          245 FGIYRERTGCLLALCAD--AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL  322 (394)
T ss_dssp             TTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCcCCccceEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987  32  5554433    32222333445888999999988763      246778888889999999


Q ss_pred             HHHhccCC---CCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHH
Q 015890          300 REALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       300 ~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                      .+.|++++   .+.+..+.+++|+|+.++     . +.+.++++++||.+.++        +|++++..+++++++++++
T Consensus       323 ~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~-~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~  388 (394)
T 2ay1_A          323 AGELRDLSGSDRFGFVAEHRGMFSRLGAT-----P-EQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARA  388 (394)
T ss_dssp             HHHHHHHHTSSTTTHHHHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHH
T ss_pred             HHHHHhcCCCCCeeEEcCCceEEEeeCCC-----H-HHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHH
Confidence            99988765   356666777899998764     2 34455667899999874        5999986688999999999


Q ss_pred             HHHH
Q 015890          377 LRRG  380 (398)
Q Consensus       377 l~~~  380 (398)
                      |+++
T Consensus       389 l~~~  392 (394)
T 2ay1_A          389 IIEV  392 (394)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            8865

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=1.3e-39  Score=299.32  Aligned_cols=314  Identities=22%  Similarity=0.312  Sum_probs=254.1

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.|.+++++|+.+.+++.+.+.......|+ ..+..++|+.+++++.+. .+++++|++++|+++++..++.++
T Consensus        19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~lr~~la~~~~~~-~~~~~~v~~~~G~~~al~~~~~~~   96 (335)
T 1uu1_A           19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY-DSPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYVMMLMF   96 (335)
T ss_dssp             CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC-CSSCHHHHHHHHHHHTCS-SCCGGGEEEESSHHHHHHHHHHHS
T ss_pred             CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCchHHHHHHHHHHcCCC-CCCHHHEEEcCChHHHHHHHHHHh
Confidence            468999999998888999999999987433355674 446899999999998543 367889999999999999999998


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                         ||+|+++ |+|+++...++..|.+++.+ +.+++ +.+|++.+     ++  +++|++++|+||||.+++.+++++|
T Consensus        97 ---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l-----~~--~~~v~l~~p~nptG~~~~~~~l~~l  163 (335)
T 1uu1_A           97 ---DRSVFFP-PTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVNV-----GE--GDVVFIPNPNNPTGHVFEREEIERI  163 (335)
T ss_dssp             ---SEEEECS-SSCHHHHHHHHHHTCEEEEC-CCCTT-SCCCCCCC-----CT--TEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             ---CCcEEEC-CCcHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHc-----CC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence               8999999 99999999999999999998 77543 56787776     23  5999999999999999998877777


Q ss_pred             HHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcc
Q 015890          190 SDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS  267 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~  267 (398)
                      +++|   | ++|+||+|  +.+..........+++++++|+||.+|++|+|+||++++   +++++.+.....  +++.+
T Consensus       164 ~~~~---~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~~~  234 (335)
T 1uu1_A          164 LKTG---A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL--PFNVS  234 (335)
T ss_dssp             HHTT---C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC---HHHHHHHHHHSC--TTCSC
T ss_pred             HHhC---C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC---HHHHHHHHHhcC--CCCcC
Confidence            7766   7 89999999  443211111223567899999999999999999999998   888888877654  46889


Q ss_pred             hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe
Q 015890          268 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI  347 (398)
Q Consensus       268 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~  347 (398)
                      .+.+.++.++|+. .+++++..++++++++++.+.|++++. .+. +.+++|+|+.++.  .+..++.+.|. ++||.+.
T Consensus       235 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~  308 (335)
T 1uu1_A          235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RIT-DSRGNFVFVFMEK--EEKERLLEHLR-TKNVAVR  308 (335)
T ss_dssp             HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBC-CCCSSEEEEECCT--HHHHHHHHHHH-HHTEEEE
T ss_pred             HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCc-EEc-CCCCeEEEEECCC--CCHHHHHHHHH-HCCEEEE
Confidence            9999999999986 457788888899999999999987753 554 4447889999874  24567778776 7899999


Q ss_pred             cCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          348 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       348 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +     .++++|++++.  .+++++++++|+++
T Consensus       309 ~-----~~~~iRis~~~--~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          309 S-----FREGVRITIGK--REENDMILRELEVF  334 (335)
T ss_dssp             E-----ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred             E-----CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence            8     36799999975  57788888888653

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=1.4e-40  Score=311.99  Aligned_cols=327  Identities=20%  Similarity=0.176  Sum_probs=253.2

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhc-C--CCCCCCCCCCCc-----HHHHHHHHHHHhhhcCC--CC-CcEEEec
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVW-D--PSISKYGADEGL-----PELRDALVKKLNQENKL--YK-SSVMVTA   96 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~-~--~~~~~y~~~~~~-----~~~~~~l~~~l~~~~~~--~~-~~v~~~~   96 (398)
                      ++.+.++|+.|.++++.|+.+.+++.+... .  .....|++..|.     .++|++++++++. +++  ++ ++|++|+
T Consensus        20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i~~t~   98 (391)
T 3bwn_A           20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYIVVGT   98 (391)
T ss_dssp             TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEEEEEE
T ss_pred             CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEeC
Confidence            567899999999987766666666533331 1  135679888898     9999999999874 343  35 5899999


Q ss_pred             ChHHHHHHHHHHhccCCC----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890           97 GANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus        97 g~t~a~~~~~~~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      |+++++..++.+++++||    +|+++.|+|.++...++..|.+++.+ +.+.+++.          .++  +++|++++
T Consensus        99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~----------~~~--~k~v~l~~  165 (391)
T 3bwn_A           99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKW-EGDAWGFD----------KKG--PYIELVTS  165 (391)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEE-EEESTTCC----------CCS--CEEEEEES
T ss_pred             ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEe-cCCHHHcC----------CCC--CEEEEECC
Confidence            999999999999999999    99999999999999999999988888 66654432          122  59999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEc-cCCcHHH
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY-PSEVEGF  251 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~-~~~~~~~  251 (398)
                      ||||||.+++     +|++.++++++++|+||+|.. ..........+++++++|+||.+|++|+|+||+++ +   +++
T Consensus       166 p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~-~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~---~~l  236 (391)
T 3bwn_A          166 PNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW-PHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVKD---KEV  236 (391)
T ss_dssp             SCTTTCCCCC-----CCC-----CCCEEEEECTTCS-TTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECC---HHH
T ss_pred             CCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC-CCCCccccCCCCeEEEEechhhcCCCccceEEEEecC---HHH
Confidence            9999999986     344422333499999999932 11111111356789999999999999999999997 6   788


Q ss_pred             HHHHHHhhccCCCCcchHHHHHHHHHhcCC----------chHHHHHHHHHHHHHHHHHHHhccCCCCccccC-------
Q 015890          252 ATQLLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-------  314 (398)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------  314 (398)
                      ++.+........++.+.+.|.++..+|+.+          +.++++.++.++++++.+.+.|++++++.+..+       
T Consensus       237 ~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f  316 (391)
T 3bwn_A          237 AKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNY  316 (391)
T ss_dssp             HHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETT
T ss_pred             HHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc
Confidence            888887776556788999999999999753          457888899999999999999988754444333       


Q ss_pred             ------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          315 ------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                            .+++|+|++++..     +.+.++++++||.++||+.|+. ++++|||++. +++++++++++|.+++++
T Consensus       317 ~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~~~~  386 (391)
T 3bwn_A          317 FGKSLESYPAFAWLGTKEE-----TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANMKLI  386 (391)
T ss_dssp             TTEEECCCCSEEEEEESSS-----CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred             ccccCCCcceEEEecCCcH-----HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence                  3355899998741     2344456789999999999875 6899999996 888999999999887654

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=5e-38  Score=294.26  Aligned_cols=366  Identities=15%  Similarity=0.143  Sum_probs=266.8

Q ss_pred             hhHhHHhhc---cCchHHHHHHHHH-HcCCCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 015890            5 AKLAKRALE---TEMPIMVQIQELV-RGAKNAVSLAQGV---VY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRD   75 (398)
Q Consensus         5 ~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~   75 (398)
                      |+.+.|...   .+...+..+.+.+ +++++.|||++|.   ..  .++.|.|.+|....+.....+.|.|..|.+++|+
T Consensus        15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~   94 (420)
T 4h51_A           15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFID   94 (420)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHH
T ss_pred             hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHH
Confidence            567777663   3344455544444 4556689999994   21  1345889998887777665667999999999999


Q ss_pred             HHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHh----ccCCCEEEEeCCCCcChhhHHHhcCcEEE-EeccCCCCCC
Q 015890           76 ALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSYMSFQMTGVTHI-LVGPCSSKTL  148 (398)
Q Consensus        76 ~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~  148 (398)
                      ++++++.... ...+  ..+-|.|+|.|+..++..+    .++||+|++++|+|++|...++..|.+.+ .+...+.+++
T Consensus        95 aia~~~~g~~-~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~  173 (420)
T 4h51_A           95 EAVKIIYGNT-VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV  173 (420)
T ss_dssp             HHHHHHHC----CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred             HHHHHhcCCC-ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence            9999874322 2222  3445788888887666654    47999999999999999999999998643 3312334456


Q ss_pred             CCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-------ccc
Q 015890          149 HPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-------CVE  218 (398)
Q Consensus       149 ~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-------~~~  218 (398)
                      .+|.+.+.+.+...+ +.+++++.+|+||||..++.+++++|+++|+++++++|+|++|  |.+++....       ...
T Consensus       174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~  253 (420)
T 4h51_A          174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR  253 (420)
T ss_dssp             EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred             CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence            778888888876322 2366677789999999999999999999999999999999999  666543221       123


Q ss_pred             CCcEEEEcccccccCCCcceeEEEEccCCcHHHH----HHHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHH
Q 015890          219 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA----TQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTER  288 (398)
Q Consensus       219 ~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~  288 (398)
                      .++++++.|+||.|+++|+|+||++++....+..    ..+.........+++...+.++...+.+.      ...++.+
T Consensus       254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m  333 (420)
T 4h51_A          254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM  333 (420)
T ss_dssp             TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            5678999999999999999999988775323322    23333444556778888888888888752      1345667


Q ss_pred             HHHHHHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCC
Q 015890          289 VKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGL  365 (398)
Q Consensus       289 ~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~  365 (398)
                      ++++.++++.+.+.|++++.   +..+.+++|+|.|..+.      .+.++ +|+++||++.+++        |||++..
T Consensus       334 ~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls------~e~v~-~L~e~~Vy~~~~g--------Ris~Agl  398 (420)
T 4h51_A          334 AERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS------KAQCE-YCQNHNIFITVSG--------RANMAGL  398 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC------HHHHH-HHHHTTEECCTTC--------EEEGGGC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC------HHHHH-HHHhCCEEEcCCC--------EEEeccC
Confidence            78888899999999987653   34455667999987664      24455 4579999998863        9999988


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++.++.++++|.++++++.+
T Consensus       399 ~~~ni~~~a~aI~~vvr~i~r  419 (420)
T 4h51_A          399 THETALMLAQTINDAVRNVNR  419 (420)
T ss_dssp             CHHHHHHHHHHHHHHHC----
T ss_pred             CHHHHHHHHHHHHHHHHHhhc
Confidence            899999999999999988765

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=7.1e-40  Score=310.14  Aligned_cols=326  Identities=17%  Similarity=0.124  Sum_probs=262.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCC--CCCCCCC-C---cHHHHHHHHHHHhhhcC--CCCCcEEEecChHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI--SKYGADE-G---LPELRDALVKKLNQENK--LYKSSVMVTAGANQA  101 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~-~---~~~~~~~l~~~l~~~~~--~~~~~v~~~~g~t~a  101 (398)
                      ...++|+.|.+++++|+.+.+++.+.+.....  ..|++.. |   ..++|+++++++.+..+  +++++|++|+|++++
T Consensus        56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a  135 (427)
T 2hox_A           56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL  135 (427)
T ss_dssp             TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred             CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence            46899999999988788888898887732222  3487777 8   89999999999987654  568899999999999


Q ss_pred             HHHHHHHh--------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890          102 FVNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       102 ~~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      +..++.++        +++||+|+++.|+|..+...++..|.+++.+        .+|++.|++.++++  +++|++++|
T Consensus       136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~--~k~v~l~~p  205 (427)
T 2hox_A          136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPE--QYIEMVTSP  205 (427)
T ss_dssp             HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGG--GEEEEEESS
T ss_pred             HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCC--ceEEEEcCC
Confidence            99999999        8999999999999999999999999876644        35788888888765  499999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      +||||.+++ +.+       +  ++..+.|++++. ..........+++++++|+||.+|++|+|+||+++++  +++++
T Consensus       206 ~NPtG~~~~-~~l-------~--~~~~i~d~~~~~-~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--~~l~~  272 (427)
T 2hox_A          206 NNPEGLLRH-AVI-------K--GCKSIYDMVYYW-PHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESVYN  272 (427)
T ss_dssp             CTTTCCCCC-CSS-------T--TCEEEEECTTCS-TTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHHHH
T ss_pred             CCCcccccH-HHH-------c--CCCEEEeecccC-CCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC--HHHHH
Confidence            999999999 422       2  556777876642 1111111125678999999999999999999999954  78889


Q ss_pred             HHHHhhccCCCCcchHHHHHHHHHhcCC-----------chHHHHHHHHHHHHHHHHHHHhccCCCCcc-----------
Q 015890          254 QLLKVQDNIPICASIISQHLALYSLQTG-----------PEWVTERVKDLVRNREIIREALSPLGEGAV-----------  311 (398)
Q Consensus       254 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-----------  311 (398)
                      .+.........+.+.+.|.++..+|+..           ++++++.++.++++++.+.+.|++.+++.+           
T Consensus       273 ~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~  352 (427)
T 2hox_A          273 NLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNY  352 (427)
T ss_dssp             HHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETT
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccccccc
Confidence            8888776666788999999988888752           245667788889999999999988743232           


Q ss_pred             ---ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          312 ---KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       312 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                         ..|.+++|+|++++.   +..+++..+++++||.++||..|+. +++||||++. +++++++++++|.++++
T Consensus       353 ~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~~  423 (427)
T 2hox_A          353 FRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVK  423 (427)
T ss_dssp             TTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHT
T ss_pred             ccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence               345668999999974   3456777787789999999998875 7899999997 88999999999988764

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=8.5e-38  Score=294.19  Aligned_cols=334  Identities=14%  Similarity=0.113  Sum_probs=263.9

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+++++|+.|.+ ++++++.+.+++.+.+...  ....|....|..++++.+++++.+.++.  +++++++|+++++..
T Consensus        41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~  118 (398)
T 3a2b_A           41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG  118 (398)
T ss_dssp             TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred             CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            4677999999987 6667899999998887542  1234555667788999999999888775  589999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~nptG~~~~  182 (398)
                      ++.+++++||.|+++.|+|..+...++..|.+++.+ +.      +|+++|++.++...  ++++|++++|+||||.+++
T Consensus       119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v-~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~  191 (398)
T 3a2b_A          119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKY-GH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN  191 (398)
T ss_dssp             HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC
T ss_pred             HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEe-CC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC
Confidence            999999999999999999999999999999999988 54      48899999997531  3699999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccC--CCccccc-c-CCc-EEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYD--GRKHCCV-E-GDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~--~~~~~~~-~-~~~-~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                         +++|.++|+++|+++|+||+|  +.++  +...... . .++ +++++|+||.++++|   ||++++   +++++.+
T Consensus       192 ---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~l  262 (398)
T 3a2b_A          192 ---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD---ADVIDFL  262 (398)
T ss_dssp             ---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC---HHHHHHH
T ss_pred             ---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC---HHHHHHH
Confidence               999999999999999999999  3332  2221111 1 124 699999999999777   999998   7888888


Q ss_pred             HHh-hccCCCCcchHHHH-HHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHH
Q 015890          256 LKV-QDNIPICASIISQH-LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       256 ~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (398)
                      ... ......+.+.+.+. ++..+++. .++.++.++.++++++.+.+.|++++. .+..+. ++++|+.++.. .+..+
T Consensus       263 ~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-g~~~~~~~~~~-~~~~~  338 (398)
T 3a2b_A          263 KHNARSVMFSASMTPASVASTLKALEI-IQNEPEHIEKLWKNTDYAKAQLLDHGF-DLGATE-SPILPIFIRSN-EKTFW  338 (398)
T ss_dssp             HHHCHHHHSSBCCCHHHHHHHHHHHHH-HHHCTHHHHHHHHHHHHHHHHHHHTTC-CBCSCC-SSEEEEECCCH-HHHHH
T ss_pred             HHhcccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHhcCC-CcCCCC-CCEEEEEcCCH-HHHHH
Confidence            764 22223344455554 45577765 344567788888899999999988754 666665 78899998642 24567


Q ss_pred             HHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +..+|+ ++||.+.++..|.   ..+++|++++. .+++++++++++|+++++++
T Consensus       339 l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          339 VTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             HHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            888776 6699999998775   35789999997 68999999999999998765

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=8.1e-37  Score=286.99  Aligned_cols=321  Identities=16%  Similarity=0.116  Sum_probs=255.6

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      ++.++++++.+++.+.+.+    .|++.  ..++++.+++++.+.+|.+++ ++++++|+++++..++.+++++||+|++
T Consensus        41 ~~~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~  114 (393)
T 1vjo_A           41 GPSNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLI  114 (393)
T ss_dssp             SCCCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence            4556789999999876543    35332  467888999999888898877 8999999999999999999999999999


Q ss_pred             eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890          119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~  195 (398)
                      +.|+|++  +...++..|.+++.+ +.+.+ +.+|++.|++.+++ ++  ++|++++|+||||.+.+   +++|.++|++
T Consensus       115 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~  187 (393)
T 1vjo_A          115 GVAGYFGNRLVDMAGRYGADVRTI-SKPWG-EVFSLEELRTALETHRP--AILALVHAETSTGARQP---LEGVGELCRE  187 (393)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EcCChhHHHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHhhCCc--eEEEEeccCCCcceecc---HHHHHHHHHH
Confidence            9999998  888889999999999 77654 56899999999986 54  89999999999999999   8999999999


Q ss_pred             cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-----------
Q 015890          196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q-----------  259 (398)
Q Consensus       196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~----~-----------  259 (398)
                      +|+++|+||+| ++...  ......+.+++++|+||+++.++ |+||++++   +++++.+...    .           
T Consensus       188 ~~~~li~Dea~~~g~~~--~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (393)
T 1vjo_A          188 FGTLLLVDTVTSLGGVP--IFLDAWGVDLAYSCSQKGLGCSP-GASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGK  261 (393)
T ss_dssp             HTCEEEEECTTTTTTSC--CCTTTTTCSEEECCSSSTTCSCS-SCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred             cCCEEEEECCccccCcC--CcccccCccEEEEcCcccccCCC-ceEEEEEC---HHHHHHHhccCCCCCceecCcHhhhh
Confidence            99999999999 54322  22223355788999999998677 99999999   7787777432    0           


Q ss_pred             ----ccCCC-CcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCC
Q 015890          260 ----DNIPI-CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLD  330 (398)
Q Consensus       260 ----~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~  330 (398)
                          ....+ +.+.+.+.++..+++.. ..++++..++++++++++.+.|++.+ +.+..+.+   +.++++.++.. .+
T Consensus       262 ~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~  339 (393)
T 1vjo_A          262 YWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDG-VD  339 (393)
T ss_dssp             HHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTT-CC
T ss_pred             hhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCC-CC
Confidence                02233 67888898888888752 23467788889999999999998874 46665543   35677777643 36


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ..++.+.|++++||.+.+|..|..++++||++ +. .+++++++++++|++++
T Consensus       340 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          340 GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            77888888744599999999887789999995 33 46778999999998875

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=8.2e-36  Score=279.36  Aligned_cols=325  Identities=14%  Similarity=0.129  Sum_probs=256.9

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      +...++.+.+++.+.+.+    .|++.  ..++++.+++++.+.+|.+ ++++++++|+++|+..++.+++++||+|+++
T Consensus        28 ~~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~  101 (386)
T 2dr1_A           28 PVACFPEVLEIMKVQMFS----HRSKE--YRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT  101 (386)
T ss_dssp             SCCCCHHHHHHTTSCCCC----TTSHH--HHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             CcCCcHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence            345688898888766532    35322  3678889999998888886 6779999999999999999999999999999


Q ss_pred             CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (398)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (398)
                      .|+|++  +...++..|++++.+ +.+. ++.+|+++|++.++...++++|++++|+||||.+.+   +++|.++|+++|
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  176 (386)
T 2dr1_A          102 IIGAFGKRYKEVVESNGRKAVVL-EYEP-GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD  176 (386)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCT-TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred             cCCchhHHHHHHHHHhCCceEEE-ecCC-CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence            999988  888889999999999 7765 356899999999953223699999999999999998   899999999999


Q ss_pred             CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH----------------Hh--
Q 015890          198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL----------------KV--  258 (398)
Q Consensus       198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~----------------~~--  258 (398)
                      +++|+|++| +.....  .....+.+++++|+||+++.+ .++||++++   +++++.+.                ..  
T Consensus       177 ~~li~D~a~~~~~~~~--~~~~~~~di~~~s~sK~~~~~-~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (386)
T 2dr1_A          177 KLVFVDAVSAMGGADI--KFDKWGLDVVFSSSQKAFGVP-PGLAIGAFS---ERFLEIAEKMPERGWYFDIPLYVKYLKE  250 (386)
T ss_dssp             CEEEEECTTTBTTBCC--CTTTTTCSEEEEETTSTTCCC-SSCEEEEEC---HHHHHHHTTCTTCCSTTCHHHHHHHHHH
T ss_pred             CeEEEEccccccCccc--cccccCCcEEEEeccccccCC-CceEEEEEC---HHHHHHHhcCCCCceEEeHHHHHHhhcc
Confidence            999999999 432211  122235679999999999855 248999999   67777652                11  


Q ss_pred             hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCCCCChHH
Q 015890          259 QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  333 (398)
                      .....++.+.+.+.++..+++....  .+++..++++++++++.+.|++++ +.+..+.   .++++++.++.. .+..+
T Consensus       251 ~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~  328 (386)
T 2dr1_A          251 KESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPG-IKGDE  328 (386)
T ss_dssp             HSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTT-CCHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCC-CCHHH
Confidence            1234567788889888888875222  367788889999999999998874 3555553   367888888743 36778


Q ss_pred             HHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          334 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.++|. ++||.+.+|..+..++++|++++. .+++++++++++|+++++++.
T Consensus       329 ~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  380 (386)
T 2dr1_A          329 VYEAMR-KRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK  380 (386)
T ss_dssp             HHHHHH-HTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            888886 569999999876667899999996 789999999999999998764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=3.6e-36  Score=284.95  Aligned_cols=335  Identities=17%  Similarity=0.156  Sum_probs=252.0

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC------CCCCCC--CCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGA--DEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQ  100 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t~  100 (398)
                      +++++|+.|.++ +.|+.+.+++.+.+.+..      ...|+.  ..+..++++.+++++    +. +++++++++|+++
T Consensus        27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~  101 (420)
T 1t3i_A           27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI----NARSPREIVYTRNATE  101 (420)
T ss_dssp             EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEcCChHH
Confidence            448999999987 678999999998875421      122322  244566677777665    55 6789999999999


Q ss_pred             HHHHHHHHh----ccCCCEEEEeCCCCcC----hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC
Q 015890          101 AFVNIVLTL----CDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN  172 (398)
Q Consensus       101 a~~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~  172 (398)
                      |+..++.++    +++||+|+++.|+|++    +...++..|.+++.+ +.+. ++.+|++.++++++++  +++|++++
T Consensus       102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~--~~~v~~~~  177 (420)
T 1t3i_A          102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDE-QESFDLEHFKTLLSEK--TKLVTVVH  177 (420)
T ss_dssp             HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCT-TSSBCHHHHHHHCCTT--EEEEEEES
T ss_pred             HHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe-ccCC-CCCcCHHHHHHhhCCC--ceEEEEeC
Confidence            999999999    8999999999999998    456677889999999 7764 4568999999999865  49999999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      |+||||.+++   +++|.++|+++|+++|+|++| ++....  .....+.+++++|+||.+|++|  +||++++   +++
T Consensus       178 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~~~~di~~~s~sK~~~~~g--~G~~~~~---~~~  247 (420)
T 1t3i_A          178 ISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYPL--DVQLIDCDWLVASGHKMCAPTG--IGFLYGK---EEI  247 (420)
T ss_dssp             BCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCC--CHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---HHH
T ss_pred             CcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCccC--chhhcCCCEEEEehhhhcCCCc--eEEEEEc---hHH
Confidence            9999999999   899999999999999999999 433211  1111235688999999888666  8999998   788


Q ss_pred             HHHHHHhhcc--------------------CCCCcchHHHHHHHH-HhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          252 ATQLLKVQDN--------------------IPICASIISQHLALY-SLQTGP-EWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       252 ~~~l~~~~~~--------------------~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      ++.+......                    +..+.+.+.+.++.. +++... .++++..++++++++.+.+.|++++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~  327 (420)
T 1t3i_A          248 LEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQL  327 (420)
T ss_dssp             HHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             HhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            8777544321                    112344455544333 454311 235677888888999999999887555


Q ss_pred             ccccCC-----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHH
Q 015890          310 AVKGGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD  375 (398)
Q Consensus       310 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~  375 (398)
                      .+..+.     .+.++++.++.  .+..++.+.| .++||.+.+|..|        +.++++|++++. .++++++++++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~  404 (420)
T 1t3i_A          328 RLYGPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQ  404 (420)
T ss_dssp             EEESCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHH
T ss_pred             EEeCCCccccccCCEEEEEECC--CCHHHHHHHH-HHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHH
Confidence            666553     24555566753  3566777655 5889999998644        236899999997 68999999999


Q ss_pred             HHHHHHHHHhc
Q 015890          376 RLRRGLEELVK  386 (398)
Q Consensus       376 ~l~~~~~~~~~  386 (398)
                      +|.++++.+.+
T Consensus       405 ~l~~~~~~~~~  415 (420)
T 1t3i_A          405 SLQATIRFFSD  415 (420)
T ss_dssp             HHHHHHHHTC-
T ss_pred             HHHHHHHHhcC
Confidence            99999987654

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=4.2e-36  Score=283.20  Aligned_cols=333  Identities=16%  Similarity=0.164  Sum_probs=249.2

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC--CCC------CCCCCCcHHHHHHHHHHHhhhcCC-CCCcEEEecChH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISK------YGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGAN   99 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~------y~~~~~~~~~~~~l~~~l~~~~~~-~~~~v~~~~g~t   99 (398)
                      |++++.|+.+.++ +.|+.+.+++.+.+.+..  .+.      |.+..+..++++.+++++    +. ++++|++++|++
T Consensus        21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t   95 (406)
T 1kmj_A           21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NARSAEELVFVRGTT   95 (406)
T ss_dssp             TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHH
T ss_pred             CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEeCChh
Confidence            4578999999887 578999999998876421  111      112344556666666665    66 578999999999


Q ss_pred             HHHHHHHHHh----ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890          100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus       100 ~a~~~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      +++..++.++    +++||+|+++.|+|++..    ..++..|.+++.+ +.+++ +.+|++.|++.++++  +++|+++
T Consensus        96 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~--~~~v~~~  171 (406)
T 1kmj_A           96 EGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPTLFDEK--TRLLAIT  171 (406)
T ss_dssp             HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTT-SCBCGGGHHHHCCTT--EEEEEEE
T ss_pred             HHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE-ecCCC-CCcCHHHHHHHhccC--CeEEEEe
Confidence            9999999999    889999999999997654    3467789999998 77653 568999999999865  4999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      +|+||||.+++   +++|.++|+++|+++|+||+| .+....  .....+.+++++|+||.+|++|  +||++++   ++
T Consensus       172 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~~--~~~~~~~d~~~~s~~K~~g~~G--~G~~~~~---~~  241 (406)
T 1kmj_A          172 HVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHPV--DVQALDCDFYVFSGHKLYGPTG--IGILYVK---EA  241 (406)
T ss_dssp             SBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCC--CHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---HH
T ss_pred             CCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCCC--cccccCCCEEEEEchhccCCCC--cEEEEEe---HH
Confidence            99999999999   999999999999999999999 432211  1112245688999999998777  7999998   78


Q ss_pred             HHHHHHHhhcc---------------------CCCCcchHHHHHHH-HHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          251 FATQLLKVQDN---------------------IPICASIISQHLAL-YSLQTGP-EWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       251 ~~~~l~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      +++.+......                     +..+.+.+.+.++. ++++... .++++..++++++++++.+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  321 (406)
T 1kmj_A          242 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP  321 (406)
T ss_dssp             HHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             HHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            88776543311                     11223444444433 5554322 2456778888899999999999886


Q ss_pred             CCccccC--CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-CCHHHHHHHHHH
Q 015890          308 EGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAADR  376 (398)
Q Consensus       308 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~~  376 (398)
                      ++.+..+  . +.++++.++.  .+..++...| .++||.+++|..|        +.++++||+++. .+++++++++++
T Consensus       322 ~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~  397 (406)
T 1kmj_A          322 DLTLYGPQNR-LGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTG  397 (406)
T ss_dssp             TEEEESCTTC-CSEEEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHH
T ss_pred             CeEEecCCCc-CCEEEEEECC--CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHH
Confidence            5566666  5 4445556652  2566777655 5889999998754        336899999998 689999999999


Q ss_pred             HHHHHHHH
Q 015890          377 LRRGLEEL  384 (398)
Q Consensus       377 l~~~~~~~  384 (398)
                      |+++++.+
T Consensus       398 l~~~~~~l  405 (406)
T 1kmj_A          398 LQRIHRLL  405 (406)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99988754

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=6.4e-36  Score=279.85  Aligned_cols=332  Identities=18%  Similarity=0.157  Sum_probs=244.4

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCC-C----C--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPS-I----S--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~----~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      +.|+.+.+. ++|+++++++.+.+.+.. .    +  .|....+..++++.+++++    ++++++|++++|+++++..+
T Consensus         3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~~~~   77 (384)
T 1eg5_A            3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----GVSPSEIFFTSCATESINWI   77 (384)
T ss_dssp             EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----TSCGGGEEEESCHHHHHHHH
T ss_pred             EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEECCHHHHHHHH
Confidence            456665555 678999999999886521 0    0  0111233456666666666    67778999999999999999


Q ss_pred             HHHhc----cCCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890          106 VLTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (398)
Q Consensus       106 ~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG  178 (398)
                      +.++.    ++||+|+++.|+|+++...+   +..|.+++.+ +.+++ +.+|++.|++.++++  +++|++++|+||||
T Consensus        78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~--~~~v~~~~~~nptG  153 (384)
T 1eg5_A           78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSR-GVVKLEELEKLVDED--TFLVSIMAANNEVG  153 (384)
T ss_dssp             HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTT-SCBCHHHHHHHCCTT--EEEEEEESBCTTTC
T ss_pred             HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEE-ccCCC-CccCHHHHHHHhCCC--CeEEEEECCCCCcc
Confidence            99998    79999999999998876655   7789999998 77654 578999999999865  59999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHcC--CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--HH
Q 015890          179 TYIPERLLKRISDLCKAAG--SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--AT  253 (398)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~--~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--~~  253 (398)
                      .+++   +++|.++|+++|  +++|+||+| ++....  .....+.+++++|+||.+|++|  +||+++++   ++  ..
T Consensus       154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~---~~~~~~  223 (384)
T 1eg5_A          154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTIGKIPF--SLEKLEVDYASFSAHKFHGPKG--VGITYIRK---GVPIRP  223 (384)
T ss_dssp             BBCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSCC--CCTTTCCSEEEEEGGGGTSCTT--CEEEEECT---TSCCCC
T ss_pred             cccC---HHHHHHHHHhcCCceEEEEEhhhhcCCccc--CchhcCCCEEEecHHHhcCCCc--eEEEEEcC---CCcccc
Confidence            9999   899999999999  999999999 543221  1122245688999999998778  79999984   32  11


Q ss_pred             HHHHh---hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeCCCC
Q 015890          254 QLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEK  327 (398)
Q Consensus       254 ~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~~~~  327 (398)
                      .+...   .....++.+.+.+.++..+++...+++++..+++.++++.+.+.|++.+ +.+..+.   .+.++++.++. 
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~-  301 (384)
T 1eg5_A          224 LIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFPN-  301 (384)
T ss_dssp             SBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECTT-
T ss_pred             ccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeCC-
Confidence            11110   1123457788888888888875335577888889999999999998744 3554432   13456666653 


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                       .+..++.+.| .++||.+.+|..|+.                   .+++||+++. .+++++++++++|+++++++.+.
T Consensus       302 -~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~  379 (384)
T 1eg5_A          302 -IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDLT  379 (384)
T ss_dssp             -CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred             -CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence             2577788877 589999999876642                   3689999996 68999999999999999887543

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=2.8e-35  Score=276.98  Aligned_cols=332  Identities=14%  Similarity=0.095  Sum_probs=248.6

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC----CCC--CCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS----ISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~----~~~--y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|++++||+.|.+ ++..+|++.+++.+.+.+..    ...  |+......++++.+++++    +.+ +.+++ ++|++
T Consensus        41 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~~~-~~i~~-~sGt~  114 (399)
T 3tqx_A           41 GEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL----GTD-DTILY-SSCFD  114 (399)
T ss_dssp             TTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH----TCS-EEEEE-SCHHH
T ss_pred             CCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH----CCC-cEEEE-CchHH
Confidence            3567999999954 22468999999888775411    111  112223456666666665    543 44555 45578


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~np  176 (398)
                      ++..++.+++++||.|+++.|+|..+...++..|.+++.+ +.      .|++.+++.++..    .++++|++++|+||
T Consensus       115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~np  187 (399)
T 3tqx_A          115 ANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRY-KN------NAMGDLEAKLKEADEKGARFKLIATDGVFSM  187 (399)
T ss_dssp             HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEE-CT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETT
T ss_pred             HHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEe-CC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCC
Confidence            9999999999999999999999999999999999999988 54      3677888888741    13699999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCc---cccc---cCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRK---HCCV---EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~---~~~~---~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      ||.+++   +++|.++|+++|+++|+||+| ..+.+..   ....   ..+.+++++|+||+++  |++.||++++   +
T Consensus       188 tG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~---~  259 (399)
T 3tqx_A          188 DGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH---K  259 (399)
T ss_dssp             TTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC---H
T ss_pred             CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC---H
Confidence            999999   999999999999999999999 5543221   1111   1245689999999997  4455999999   7


Q ss_pred             HHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      ++++.+.....  ..+.+.+...++++..+++....+.++..+++.++++++.+.|++++. .+..+. ++++|+.++..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~  337 (399)
T 3tqx_A          260 EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGF-QLVPGN-HPIIPVMLGDA  337 (399)
T ss_dssp             HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSEEEEEEECH
T ss_pred             HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH
Confidence            88888876432  224467777888888888752255688888999999999999988765 555555 67788887642


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                       .+..++..+|+ ++||.+.++..+.   ..+++|++++. .+++++++++++|.++++++
T Consensus       338 -~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          338 -QLATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             -HHHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence             24567888776 6899999876542   34689999985 78999999999999998875

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=1e-34  Score=272.49  Aligned_cols=335  Identities=16%  Similarity=0.107  Sum_probs=245.4

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC  110 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~  110 (398)
                      +.+.|+.+. +.++|+.+++++.+.+.+.  ..+.......++++.++++    ++.+++++++|+|+++++..++.+++
T Consensus         8 ~~~yl~~~~-~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~----~g~~~~~v~~t~g~t~a~~~~~~~~~   80 (392)
T 2z9v_A            8 DPVITLTAG-PVNAYPEVLRGLGRTVLYD--YDPAFQLLYEKVVDKAQKA----MRLSNKPVILHGEPVLGLEAAAASLI   80 (392)
T ss_dssp             CCSEECSSS-CCCCCHHHHHHTTSCCCCT--TSHHHHHHHHHHHHHHHHH----TTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred             CcceeecCC-CcCCCHHHHHHHhcccccc--ccHHHHHHHHHHHHHHHHH----hCCCCCEEEEeCCchHHHHHHHHHhc
Confidence            334455443 4467899999988776431  1111112234455555554    47777899999999999999999999


Q ss_pred             cCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       111 ~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ++||+|+++.|+|+++  ...++..|.+++.+ +.++++ .+|++.|++.++..+++++|++++|+||||.+++   +++
T Consensus        81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~  155 (392)
T 2z9v_A           81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEI-EVPYNE-AIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA  155 (392)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEE-ECCTTS-CCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred             CCCCEEEEecCCcccHHHHHHHHHcCCceEEe-eCCCCC-CCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence            9999999999999775  34456679999998 777654 6899999999963223599999999999999999   889


Q ss_pred             HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015890          189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQ-------  259 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~-------  259 (398)
                      |.++|+++|+++|+|++| ++.....  ....+.+++++|+||+++ ++|  +||++++   +++++.+....       
T Consensus       156 i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~---~~~~~~l~~~~~g~~~~~  228 (392)
T 2z9v_A          156 IGALVSAHGAYLIVDAVSSFGGMKTH--PEDCKADIYVTGPNKCLGAPPG--LTMMGVS---ERAWAKMKANPLAPRASM  228 (392)
T ss_dssp             HHHHHHHTTCEEEEECTTTBTTBSCC--GGGGTCSEEEECSSSTTCCCSC--CEEEEEC---HHHHHHHHTCTTSCCSST
T ss_pred             HHHHHHHcCCeEEEEcccccCCcccc--cccccceEEEecCcccccCCCc--eeEEEEC---HHHHHHhhhccCCCCcee
Confidence            999999999999999999 5432211  112235588999999664 344  5999998   78887775421       


Q ss_pred             -------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEE
Q 015890          260 -------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW  321 (398)
Q Consensus       260 -------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~  321 (398)
                                   ....++.+...+.++..+++....+ +++..+++.++++++.+.|++++ +.+..+.    .+++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~  307 (392)
T 2z9v_A          229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTA  307 (392)
T ss_dssp             TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEE
T ss_pred             ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEE
Confidence                         1123455666666666677642333 67778888888999999888774 3555422    367788


Q ss_pred             eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-c-CCCHHHHHHHHHHHHHHHHHHhc
Q 015890          322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-G-GLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.++.. .+..++.++|.+++||.+.+|..+..++++|+++ + ..+++++++++++|+++++++.-
T Consensus       308 ~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~  373 (392)
T 2z9v_A          308 VRTPDG-VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGR  373 (392)
T ss_dssp             EECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred             EECCCC-CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCC
Confidence            888643 3677888888744599999998766788999994 5 46899999999999999987653

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=8.2e-35  Score=273.28  Aligned_cols=337  Identities=10%  Similarity=0.067  Sum_probs=250.3

Q ss_pred             HHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChH
Q 015890           23 QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKS-SVMVTAGAN   99 (398)
Q Consensus        23 ~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t   99 (398)
                      ++...+++ .+.++.|  +.++|+.+++++.+.+..    .|.+  .....++++.++++    ++.+++ +|++++|++
T Consensus        12 ~~~~~~~~-~~~~~~g--~~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~----~g~~~~~~i~~~~g~t   80 (393)
T 2huf_A           12 REPLVTPN-KLLMGPG--PSNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYL----FQTNNIATFCLSASGH   80 (393)
T ss_dssp             GSCCCCCC-CEECSSS--CCCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHH----HTCCCSEEEEESSCHH
T ss_pred             hcccCCCC-eEEecCC--CCCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH----hCCCCCcEEEEcCcHH
Confidence            44444443 4555555  566789999998876543    2321  22334455555554    477665 899999999


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP  176 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~np  176 (398)
                      +++..++.+++++||+|+++.|+|+++  ...++..|.+++.+ +.+++ +.+|++.|++.+++ ++  ++|++++|+||
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~np  156 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVV-KSKVG-QSLSLDEIRDALLIHKP--SVLFLTQGDSS  156 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEE-eCCCC-CCCCHHHHHHHHhccCC--cEEEEEccCCC
Confidence            999999999999999999999999874  34456689999999 77654 46899999999986 54  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      ||.+++   +++|.++|+++|+++|+|+++ ++....  .....+.++++.|+||++ |++|+  ||++++   +++++.
T Consensus       157 tG~~~~---l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~---~~~~~~  226 (393)
T 2huf_A          157 TGVLQG---LEGVGALCHQHNCLLIVDTVASLGGAPM--FMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS---HRAVER  226 (393)
T ss_dssp             TTEECC---CTTHHHHHHHTTCEEEEECTTTBTTBCC--CTTTTTCSEEECCSSSTTCCCSSC--EEEEEC---HHHHHH
T ss_pred             ccccCC---HHHHHHHHHHcCCEEEEEcccccCCCCc--chhhcCccEEEECCCcccccCCCe--EEEEEC---HHHHHH
Confidence            999999   899999999999999999999 543221  122234668899999975 55665  999998   788888


Q ss_pred             HHHhh----c-------------------cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          255 LLKVQ----D-------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       255 l~~~~----~-------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      +....    .                   ....+.+...+.++.++++...+ .+++..++++++++++.+.|++++. .
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~  305 (393)
T 2huf_A          227 YKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGF-E  305 (393)
T ss_dssp             HHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred             HhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC-e
Confidence            76541    0                   01134566777776667764222 3677788888899999999988743 5


Q ss_pred             cccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          311 VKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       311 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +..+.   .+.++++.++.. .+..++.++|++++||.+.+|..+..++++||++ +. .+++++++++++|.++++++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~  384 (393)
T 2huf_A          306 LYADPKDRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK  384 (393)
T ss_dssp             BSSCGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred             eccCccccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence            55543   245777887632 3677888888756799999998776788999999 53 468899999999999998875


Q ss_pred             c
Q 015890          386 K  386 (398)
Q Consensus       386 ~  386 (398)
                      .
T Consensus       385 ~  385 (393)
T 2huf_A          385 P  385 (393)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=2.6e-34  Score=269.96  Aligned_cols=320  Identities=13%  Similarity=0.049  Sum_probs=244.5

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-------
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-------  112 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~-------  112 (398)
                      ...+++|++.+++.+.+... ...+....+..++++.+++++.+.++.++++|++++|+++++..++.++..+       
T Consensus        38 ~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           38 MCSNVLPITRKIVDIFLETN-LGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             SCCCCCTHHHHHHHHHTTCC-TTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecCCCcHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            34456789999999988653 2222222355778888889888888998999999999999999999999765       


Q ss_pred             ------CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHH
Q 015890          113 ------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERL  185 (398)
Q Consensus       113 ------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~  185 (398)
                            ||+|+++.|+|+++...++..|++++.+ +.+++ +.+|+++|++.+++ ++  ++|++++|+||||.+.+   
T Consensus       117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---  189 (397)
T 3f9t_A          117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYA-PIKED-YTIDEKFVKDAVEDYDV--DGIIGIAGTTELGTIDN---  189 (397)
T ss_dssp             TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEE-CBCTT-SSBCHHHHHHHHHHSCC--CEEEEEBSCTTTCCBCC---
T ss_pred             cccCCCCeEEEECCcchhHHHHHHHHcCceeEEE-eeCCC-CcCCHHHHHHHHhhcCC--eEEEEECCCCCCCCCCC---
Confidence                  8999999999999999999999999999 87654 57899999999987 54  89999999999999998   


Q ss_pred             HHHHHHHHHHcCCEEEEeece--e--ccCCC---------ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          186 LKRISDLCKAAGSWLVVDNTY--F--MYDGR---------KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~--~--~~~~~---------~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +++|.++|+++|+++|+||+|  +  .+.+.         +..... +.++++.|++|+++ +|.++|++++++  +.+.
T Consensus       190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~--~~~~  265 (397)
T 3f9t_A          190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKD--IGYK  265 (397)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESS--GGGG
T ss_pred             HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeC--HHHH
Confidence            899999999999999999999  2  22221         111122 45688999999885 677999988875  4444


Q ss_pred             HHHHHhhccC-----------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEE
Q 015890          253 TQLLKVQDNI-----------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  321 (398)
Q Consensus       253 ~~l~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  321 (398)
                      +.+.......           ..+.+...+.++...+.  ...+++..++..++++++.+.|++++. .+..+..+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~  342 (397)
T 3f9t_A          266 RYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG--REGQRKIVNECMENTLYLYKKLKENNF-KPVIEPILNIVA  342 (397)
T ss_dssp             GGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEEE
T ss_pred             HhhccCCccccCCCccccccccccchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEcCCCccEEE
Confidence            4332211111           11224555555555553  355678888888999999999988854 544444477788


Q ss_pred             eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      +.++.    ..++.+.|. ++||.+.++.   .++++|++++. .+++++++++++|.++++
T Consensus       343 ~~~~~----~~~~~~~l~-~~gi~v~~~~---~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          343 IEDED----YKEVCKKLR-DRGIYVSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             EECTT----HHHHHHHHH-HTTCBCEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             EEeCC----HHHHHHHHH-hCCeEEeccC---CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            88763    567777775 7799999976   36899999996 689999999999988764

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=6.1e-35  Score=270.01  Aligned_cols=321  Identities=14%  Similarity=0.046  Sum_probs=240.3

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      .+.++||.+++++.+.+...  ..+.......++++.+++++    +.+++++++++|+++++..++.++.++||+|+++
T Consensus         8 ~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~----g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~   81 (352)
T 1iug_A            8 GPVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAF----RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP   81 (352)
T ss_dssp             SSCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHH----TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHh----CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence            45667899999998876431  11111123455666666655    7777899999999999999999999999999999


Q ss_pred             CCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-
Q 015890          120 APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-  196 (398)
Q Consensus       120 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~-  196 (398)
                      .|+|+++.  ..++..|.+++.+ +.+++ +.+|++++++   ++  +++|++++|+||||.+++   +++|.++|+++ 
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~---~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  151 (352)
T 1iug_A           82 VYGKFSERFYEIALEAGLVVERL-DYPYG-DTPRPEDVAK---EG--YAGLLLVHSETSTGALAD---LPALARAFKEKN  151 (352)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCTTTSCC---SS--CSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred             eCCchhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHhc---cC--CcEEEEEEecCCcceecC---HHHHHHHHHhhC
Confidence            99998864  4556689999999 77654 4678888877   33  589999999999999999   88999999999 


Q ss_pred             -CCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH---------HH----Hh-hc
Q 015890          197 -GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ---------LL----KV-QD  260 (398)
Q Consensus       197 -~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~---------l~----~~-~~  260 (398)
                       |+++|+|++| ++.....  ....+.+++++|+||+++ ++.++||++++   +++++.         +.    .. ..
T Consensus       152 ~~~~li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T 1iug_A          152 PEGLVGADMVTSLLVGEVA--LEAMGVDAAASGSQKGLM-CPPGLGFVALS---PRALERLKPRGYYLDLARELKAQKEG  225 (352)
T ss_dssp             TTCEEEEECTTTBTTBCCC--SGGGTCSEEEEESSSTTC-CCSCEEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred             CCCEEEEECCccccCccee--ccccCeeEEEecCccccc-CCCceeEEEEC---HHHHHHhhCCCceeeHHHHHhhcccC
Confidence             9999999999 5432211  112235588999999553 22347999988   665543         21    11 12


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      ...++.+.+.+.++.++++....++++..++++++++++.+.|++++ ..+..+. .++++++.++.. .+..++.++|.
T Consensus       226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~  303 (352)
T 1iug_A          226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEG-VPYARVKEAFA  303 (352)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTT-CCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccccccCCeEEEEEcCCC-CCHHHHHHHHH
Confidence            23456777788777777765333377888889999999999998874 4666553 577888888743 36778888876


Q ss_pred             HhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          340 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       ++||.+.+|..+..++++|++++. .+++++++++++|+++++++.
T Consensus       304 -~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  349 (352)
T 1iug_A          304 -QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL  349 (352)
T ss_dssp             -TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred             -HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence             779999998855557899999997 579999999999999988763

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=7.3e-35  Score=273.92  Aligned_cols=330  Identities=14%  Similarity=0.127  Sum_probs=249.8

Q ss_pred             cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhcc
Q 015890           35 LAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD  111 (398)
Q Consensus        35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~  111 (398)
                      +..+.++.++++.+.+++.+.+..    .|.+.  ....++++.+++++    +.+++ +|++++|+++++..++.++++
T Consensus        20 ~~~~~~p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~   91 (396)
T 2ch1_A           20 IMMGPGPSNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF----QTENRATMCVSGSAHAGMEAMLSNLLE   91 (396)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH----TCCCSCEEEESSCHHHHHHHHHHHHCC
T ss_pred             eeecCCCCCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh----CCCCCcEEEECCcHHHHHHHHHHHhcC
Confidence            344555677889999988765532    24221  22456666666666    67777 899999999999999999999


Q ss_pred             CCCEEEEeCCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          112 AGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      +||+|+++.|+|+++.  ..++..|++++.+ +.+. ++.+|++.+++.+++ +  +++|++++|+||||.+++   +++
T Consensus        92 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~--~~~v~~~~~~nptG~~~~---~~~  164 (396)
T 2ch1_A           92 EGDRVLIAVNGIWAERAVEMSERYGADVRTI-EGPP-DRPFSLETLARAIELHQ--PKCLFLTHGDSSSGLLQP---LEG  164 (396)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTT
T ss_pred             CCCeEEEEcCCcccHHHHHHHHHcCCceEEe-cCCC-CCCCCHHHHHHHHHhCC--CCEEEEECCCCCCceecC---HHH
Confidence            9999999999998874  4678899999999 7765 457899999999986 5  499999999999999999   899


Q ss_pred             HHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh--------
Q 015890          189 ISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------  259 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~--------  259 (398)
                      |.++|+++|+++|+||+| ++...  ......+.++++.|++|.++ ++.++|+++++   +++++.+....        
T Consensus       165 i~~l~~~~~~~li~Dea~~~g~~~--~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~  238 (396)
T 2ch1_A          165 VGQICHQHDCLLIVDAVASLCGVP--FYMDKWEIDAVYTGAQKVLG-APPGITPISIS---PKALDVIRNRRTKSKVFYW  238 (396)
T ss_dssp             HHHHHHHTTCEEEEECTTTBTTBC--CCTTTTTCCEEECCCC-CCC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCGGG
T ss_pred             HHHHHHHcCCEEEEEccccccCCc--cchhhcCcCEEEEcCCcccc-CCCCeEEEEEC---HHHHHhhhhccCcccceEe
Confidence            999999999999999999 54322  12222233577789999875 33456999998   67777664310        


Q ss_pred             ---------------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEE
Q 015890          260 ---------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIY  319 (398)
Q Consensus       260 ---------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~  319 (398)
                                     ....++.+...+.++.++++.. ..++++..++++++++++.+.|++++. .+..+.+    +.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~  317 (396)
T 2ch1_A          239 DLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGL-DIFVKDPRHRLPTV  317 (396)
T ss_dssp             CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC-CBSSCSGGGBCTTE
T ss_pred             chHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCC-eeccCCccccCCce
Confidence                           1123456778888888888752 234677888888999999999987743 6665543    247


Q ss_pred             EEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          320 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +++.++.+ .+..++.++|++++||.+++|..+..++++||++ +. .+++++++++++|+++++++...
T Consensus       318 ~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~  386 (396)
T 2ch1_A          318 TGIMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPD  386 (396)
T ss_dssp             EEEECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEcCCC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCcc
Confidence            78888643 3677888888755699999988766788999999 43 57899999999999999887644

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=2.8e-34  Score=268.63  Aligned_cols=326  Identities=17%  Similarity=0.085  Sum_probs=247.0

Q ss_pred             cCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcEEEecChHHHHHHHHHHhccCCCEE
Q 015890           39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v~~~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      ..+.+++|++++++.+.+...    +  .....+..+.+.+.+.+.++.++  +++++++|+++++. ++.+++++||+|
T Consensus         8 ~gp~~~~~~v~~a~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~v   80 (384)
T 3zrp_A            8 VGPTTIKEDVLVAGLENNVGF----T--SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKI   80 (384)
T ss_dssp             SSCSCCCHHHHHHTTCCSCCT----T--SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEE
T ss_pred             CCCCCCCHHHHHHhhcccccc----c--cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEE
Confidence            345667899999887765321    1  22224455555555555567776  88999999999999 999999999999


Q ss_pred             EEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890          117 VMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (398)
Q Consensus       117 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~  194 (398)
                      +++.++|++  +...++..|.+++.+ +.+.+ +.+|++++++.+++.. +++|++++|+||||.+++   +++|.++|+
T Consensus        81 i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~-~~~v~~~~~~nptG~~~~---l~~i~~l~~  154 (384)
T 3zrp_A           81 LVVSNGVFGDRWEQIFKRYPVNVKVL-RPSPG-DYVKPGEVEEEVRKSE-YKLVALTHVETSTGVREP---VKDVINKIR  154 (384)
T ss_dssp             EEECSSHHHHHHHHHHTTSSCEEEEE-CCSTT-CCCCHHHHHHHHHHSC-EEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred             EEecCCcchHHHHHHHHHcCCcEEEe-cCCCC-CCCCHHHHHHHHHhCC-CcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence            999999966  556668889999999 87764 4689999999998733 599999999999999999   899999999


Q ss_pred             HcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH-------------HHhh-
Q 015890          195 AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-------------LKVQ-  259 (398)
Q Consensus       195 ~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l-------------~~~~-  259 (398)
                      ++|+++|+|++| ++....  .....+.+++++|+||+++ ++.++|+++++   +++++.+             .... 
T Consensus       155 ~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  228 (384)
T 3zrp_A          155 KYVELIVVDGVSSVGAEEV--KAEEWNVDVYLTASQKALG-SAAGLGLLLLS---PKALSILDSQNSIAGYYLDLRNWLP  228 (384)
T ss_dssp             GGEEEEEEECTTTTTTSCC--CTTTTTCSEEEEETTSTTC-CCSSEEEEEEC---HHHHHHHHHCCCSCCSTTCHHHHHH
T ss_pred             hcCCEEEEECcccccCccc--cccccCCCEEEecCccccc-CCCceEEEEEC---HHHHHHhcCCCCCCcccccHHHHHH
Confidence            999999999999 443221  1222345688999999885 33458999998   6776666             2211 


Q ss_pred             --------ccCCC-CcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCC
Q 015890          260 --------DNIPI-CASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLP  325 (398)
Q Consensus       260 --------~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~  325 (398)
                              ....+ +.+...+.++..+++..... +++..++++++++++.+.|++++ +.+..+.    .++++++.++
T Consensus       229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~  307 (384)
T 3zrp_A          229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILK  307 (384)
T ss_dssp             HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECS
T ss_pred             HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECC
Confidence                    11222 56777777776777642223 67888888999999999998884 3565554    4677788887


Q ss_pred             CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccc
Q 015890          326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                      .  .+..++.+.|. ++||.+++|..+.. +++|++++. .+++++++++++|+++++++....
T Consensus       308 ~--~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~~  367 (384)
T 3zrp_A          308 V--ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEPI  367 (384)
T ss_dssp             S--SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             C--CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCCc
Confidence            5  36788888876 67999999875433 899999886 789999999999999999876543

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=4e-34  Score=270.16  Aligned_cols=327  Identities=10%  Similarity=0.039  Sum_probs=251.3

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc-EEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~-v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      .+.++++++++++.+.+.    ..|  .....++.+.+.+++.+.++.+.++ +++++|+++++..++.+++++||+|++
T Consensus        20 gp~~~~~~v~~a~~~~~~----~~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~   93 (411)
T 3nnk_A           20 GPINADPRVLRAMSSQLI----GQY--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLV   93 (411)
T ss_dssp             SCCCCCHHHHHHHTSCCC----CTT--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCCCCHHHHHHhhcccc----ccc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEE
Confidence            466778999998876542    122  2223455566666666666777665 788899999999999999999999999


Q ss_pred             eCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890          119 FAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       119 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~  195 (398)
                      +.|+|++  +...++..|++++.+ +.+.+ +.+|+++|++.+++ +  +++|++++|+||||.+.+   +++|.++|++
T Consensus        94 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~  166 (411)
T 3nnk_A           94 PVFGRFGHLLCEIARRCRAEVHTI-EVPWG-EVFTPDQVEDAVKRIR--PRLLLTVQGDTSTTMLQP---LAELGEICRR  166 (411)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             ecCCchHHHHHHHHHHcCCeEEEE-ecCCC-CCCCHHHHHHHHhhCC--CeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence            9999987  888889999999999 77544 57899999999985 4  499999999999999999   8899999999


Q ss_pred             cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015890          196 AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------------  259 (398)
Q Consensus       196 ~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---------------  259 (398)
                      +|+++|+|+++ +....  ......+.++++.|++|+++ ++.++|+++++   +++++.+....               
T Consensus       167 ~~~~li~Dea~~~~~~~--~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~gg~  240 (411)
T 3nnk_A          167 YDALFYTDATASLGGNP--LETDVWGLDAVSAGMQKCLG-GPSGTSPITLS---ARMEEAIRRRKCVEEGIRTDAHRDGD  240 (411)
T ss_dssp             HTCEEEEECTTTBTTBC--CCTTTTTCSEEECCSTTTTC-CCSSEEEEEEC---HHHHHHHHTTCCCCGGGCCTTCCCCS
T ss_pred             cCCEEEEECCcccCCcc--cchhccCCcEEEecCccccC-CCCceEEEEEC---HHHHHHHhhccccccccccccccccc
Confidence            99999999998 43221  12222345688999999854 34468999999   78888776543               


Q ss_pred             ---------------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCCc-
Q 015890          260 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG-  316 (398)
Q Consensus       260 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-  316 (398)
                                           .....+.+...+.++..+++....+ +++..+++.++++++.+.|++.+. .+..+.+ 
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~  319 (411)
T 3nnk_A          241 EEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGL-ETFGDLKH  319 (411)
T ss_dssp             SCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGGG
T ss_pred             CCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeCCCccc
Confidence                                 1123456777777777777653333 678888899999999999988754 5554432 


Q ss_pred             --cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          317 --AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       317 --~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                        ++++++.+++. .+..++..+|++++||.+++|.....++++||++ +. .+++++++++++|+++++++...
T Consensus       320 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~  393 (411)
T 3nnk_A          320 KMNNVLGVVIPQG-INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP  393 (411)
T ss_dssp             BCSSEEEEECCTT-CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccccEEEEECCCC-CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence              57788888653 3677888888766699999986555678999998 65 57899999999999999886543

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=1.3e-34  Score=271.15  Aligned_cols=327  Identities=13%  Similarity=0.083  Sum_probs=247.6

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcC-CC---CCCC--CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-PS---ISKY--GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+.++||+.|.+ ++.++|.+.+++.+.+.+ ..   ...|  +...+..++++.+++++    +++  +.++++++++
T Consensus        37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~  110 (384)
T 1bs0_A           37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GYS--RALLFISGFA  110 (384)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC--cEEEeCCcHH
Confidence            5678999999875 545789999999888754 11   1123  33455677788888776    553  4455555589


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCcc
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGT  179 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~  179 (398)
                      ++..++.+++++||.|+++.|+|..+...++..|.+++.+ +.      .|+++|++.++..+ .+++|++++|+||||.
T Consensus       111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~  183 (384)
T 1bs0_A          111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-AH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGD  183 (384)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-CT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCC
T ss_pred             HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEe-CC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCC
Confidence            9999999999999999999999999999999999999988 53      37899999987542 2488889999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-ecc-C--CCccc-cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMY-D--GRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~-~--~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      +++   +++|.++|+++|+++|+||+| ... .  +.... ....+.+++++|+||.++++|   ||++++   +++++.
T Consensus       184 ~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~  254 (384)
T 1bs0_A          184 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADY  254 (384)
T ss_dssp             BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHH
T ss_pred             ccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC---cEEEeC---HHHHHH
Confidence            999   899999999999999999999 332 2  22211 111223488999999998766   999998   788888


Q ss_pred             HHHhhc--cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          255 LLKVQD--NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       255 l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      +.....  ..+.+.+.+.++++.++++...+ +.++..++++++++++.+.|++++. .+.. ..++++|+.++.. .+.
T Consensus       255 l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~~-~~~  331 (384)
T 1bs0_A          255 LLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLAD-SCSAIQPLIVGDN-SRA  331 (384)
T ss_dssp             HHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECS-CCSSBCCEEEESH-HHH
T ss_pred             HHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCC-cccC-CCCCEEEEEeCCH-HHH
Confidence            765421  12335788888888888875222 6678888899999999999998864 5554 3467777777532 245


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .++.++|. ++||.+.++..++.   .+++|++++. .+++++++++++|+++
T Consensus       332 ~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          332 LQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             HHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            67788776 67999999887642   3789999997 5899999999998764

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=1.6e-34  Score=274.22  Aligned_cols=341  Identities=16%  Similarity=0.092  Sum_probs=248.4

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcC-C-CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-P-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|++++||+.|.+ ++..+|.+.+++.+.+.. . ....|....|..+..+.+++.+.++++.+  +.+++++|++++..
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~  139 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG  139 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence            4567899999974 435789999999888754 2 12223333444333344444444434553  56666777789999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~nptG~~~~  182 (398)
                      ++.+++++||.|+++.|+|.++...++..|.+++.+ +.      .|++.|++.++...  .+++|++++++||||.+.+
T Consensus       140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~  212 (427)
T 2w8t_A          140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF-RH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP  212 (427)
T ss_dssp             HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEe-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence            999999999999999999999999999999999888 42      48999999997521  3699999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccC--CCccc---cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYD--GRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~--~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                         +++|.++|+++|+++|+||+|  +.+.  +....   ....+.+++++|+||++|++|   ||++++   +++++.+
T Consensus       213 ---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~---~~l~~~l  283 (427)
T 2w8t_A          213 ---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSN---HPKFEAV  283 (427)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEEC---CTTGGGG
T ss_pred             ---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeC---HHHHHHH
Confidence               999999999999999999999  3332  22211   112345789999999998766   999998   5666655


Q ss_pred             HHhh--ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCCChH
Q 015890          256 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       256 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  332 (398)
                      ....  ...+.+.++..++++.++++.. ...++..++++++++++.+.|++.+. .+. .+..++++++.++.. .+..
T Consensus       284 ~~~~~~~~~~~~~~~~~~aa~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~  360 (427)
T 2w8t_A          284 RLACRPYIFTASLPPSVVATATTSIRKL-MTAHEKRERLWSNARALHGGLKAMGF-RLGTETCDSAIVAVMLEDQ-EQAA  360 (427)
T ss_dssp             GGTCHHHHSSCCCCHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHHHHHHTC-EESCSSCCSSEEEEEESSH-HHHH
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCCCEEEEEECCH-HHHH
Confidence            4431  1234566777777777777652 12466778888888899888887754 555 341467888888632 2356


Q ss_pred             HHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhccccc
Q 015890          333 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV  390 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~  390 (398)
                      ++..+|+ ++||.+.++..|..   .+++|++++. .+++++++++++|.++++++.+....
T Consensus       361 ~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~  421 (427)
T 2w8t_A          361 MMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIGLE  421 (427)
T ss_dssp             HHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC---
T ss_pred             HHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCccccc
Confidence            7778776 67999999887653   3689999997 79999999999999999987765443

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=1.9e-34  Score=273.54  Aligned_cols=341  Identities=15%  Similarity=0.104  Sum_probs=250.4

Q ss_pred             HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      .++++.+.|+.+.+. ++||++++++.+.+.......++.      ..+..+..+.+.+.+.+.++.++++|++++|+++
T Consensus        18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~   96 (423)
T 3lvm_A           18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATE   96 (423)
T ss_dssp             --CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHH
T ss_pred             cccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHH
Confidence            356788888877665 679999999998876111111111      1122344455666666666888889999999999


Q ss_pred             HHHHHHHHhcc----CCCEEEEeCCCCcChhhHH---HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890          101 AFVNIVLTLCD----AGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       101 a~~~~~~~l~~----~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      |++.++.++.+    +||+|+++.++|+++...+   +..|++++.+ +.++ ++.+|++.|++.+++++  ++|++++|
T Consensus        97 a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~v~~~~~  172 (423)
T 3lvm_A           97 SDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQR-NGIIDLKELEAAMRDDT--ILVSIMHV  172 (423)
T ss_dssp             HHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCT-TSCCCHHHHHHHCCTTE--EEEECCSB
T ss_pred             HHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEe-ccCC-CCccCHHHHHHhcCCCc--EEEEEeCC
Confidence            99999998874    7999999999999887766   4559999999 8776 45789999999998754  99999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +||||.+++   +++|.++|+++|+++|+||+| ++...  ......+.+++++|+||.+|++|  +|++++++   +..
T Consensus       173 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~--~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~~  242 (423)
T 3lvm_A          173 NNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP--IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR---KPR  242 (423)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC--CCTTTSCCSEEEEESTTTTSCSS--CEEEEECB---TTB
T ss_pred             CCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC--cChhhcCCCEEEechHHhcCCCC--eEEEEEec---ccc
Confidence            999999999   899999999999999999999 43221  12222345688999999887665  89998883   333


Q ss_pred             HHHHHhhc-------cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEe
Q 015890          253 TQLLKVQD-------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWA  322 (398)
Q Consensus       253 ~~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~  322 (398)
                      +.+.....       ....+.+...+.++..+++....++++..++++++++++.+.|++++++.+..+.+   +.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  322 (423)
T 3lvm_A          243 VRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNV  322 (423)
T ss_dssp             CCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEE
T ss_pred             CCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE
Confidence            33332211       22345677777777777765334578888899999999999999886656665442   244555


Q ss_pred             eCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      .++.  .+..++...|. +  |.+.+|..|..                   .+++|++++. .+++++++++++|+++++
T Consensus       323 ~~~~--~~~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~  397 (423)
T 3lvm_A          323 SFNY--VEGESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIG  397 (423)
T ss_dssp             EETT--SCHHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EeCC--CCHHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            5542  35677777664 4  99999877643                   4789999997 788999999999999998


Q ss_pred             HHhcc
Q 015890          383 ELVKD  387 (398)
Q Consensus       383 ~~~~~  387 (398)
                      ++.+.
T Consensus       398 ~~~~~  402 (423)
T 3lvm_A          398 RLRDL  402 (423)
T ss_dssp             HHHTS
T ss_pred             Hhhcc
Confidence            87653

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=1.2e-34  Score=270.95  Aligned_cols=324  Identities=18%  Similarity=0.141  Sum_probs=240.1

Q ss_pred             CCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc----cCCCE
Q 015890           43 QPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS  115 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~----~~gd~  115 (398)
                      ++|+.+++++.+.+.+..   ...|....+..+..+.+.+.+.++++.+++++++++|+++++..++.++.    ++||+
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~   90 (382)
T 4eb5_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCE
Confidence            578999999999876421   11132222223344555555555557777899999999999999999998    89999


Q ss_pred             EEEeCCCCcChhhHHH---hcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          116 VVMFAPYYFNSYMSFQ---MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       116 Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      |+++.|+|+++...++   ..|++++.+ +.+++ +.+|++.|++.++++  +++|++++|+||||.+++   +++|.++
T Consensus        91 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---l~~i~~l  163 (382)
T 4eb5_A           91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDD--TILVSVQHANNEIGTIQP---VEEISEV  163 (382)
T ss_dssp             EEEETTCCHHHHHHHHHHTTTTCEEEEE-CBCTT-SCBCHHHHHHHCCTT--EEEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred             EEECCCcchHHHHHHHHHHhCCcEEEEe-ccCCC-CccCHHHHHHHhcCC--CeEEEEeccCCCccccCC---HHHHHHH
Confidence            9999999988776654   369999999 87654 568999999999865  489999999999999999   8899999


Q ss_pred             HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-------hccCCC
Q 015890          193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------QDNIPI  264 (398)
Q Consensus       193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~  264 (398)
                      |+++|++ |+|++| ++....  .....+.+++++|+||.+|++|  +|++++++   +.  .+...       ......
T Consensus       164 ~~~~~~~-i~D~a~~~g~~~~--~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~--~l~~~~~~~~~~~~~~~~  233 (382)
T 4eb5_A          164 LAGKAAL-HIDATASVGQIEV--DVEKIGADMLTISSNDIYGPKG--VGALWIRK---EA--KLQPVILGGGQENGLRSG  233 (382)
T ss_dssp             HTTSSEE-EEECTTTBTTBCC--CHHHHTCSEEEEETGGGTCCSS--CEEEEEET---TC--CCCCSSCSSCTGGGTSCS
T ss_pred             HHHCCCE-EEEcchhcCCccc--CccccCCCEEEeehHHhcCCCc--eEEEEEcc---cc--ccCceecCCCccccccCC
Confidence            9999999 999999 543221  1111235688999999987656  68988884   21  11111       112234


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                      +.+...+.++..+++...+++++..+++.++++.+.+.|++++++.+..+.+   ++++++.++.  .+..++.+.|. +
T Consensus       234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-~  310 (382)
T 4eb5_A          234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD-M  310 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHH-H
T ss_pred             CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHH-H
Confidence            5566677766667664334567888888999999999999875555555431   4567777762  35778888775 7


Q ss_pred             cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +||.+.+|..|..                   ++++||+++. .+++++++++++|+++++++.+
T Consensus       311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             HTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            8999999876432                   4789999996 6899999999999999988765

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=6.3e-35  Score=274.05  Aligned_cols=325  Identities=13%  Similarity=0.141  Sum_probs=240.6

Q ss_pred             HcCCCeEEcCCccCCCC---CcHHHHHHHHHhhcCCCCC-CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSIS-KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~~~---~~~~v~~a~~~~~~~~~~~-~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.++||+.+.++..   .+|++.+++.+.+.+.... .+.+.....++++.+++++    +  .+++++++|+++++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~v~~~~~gt~a~  106 (392)
T 3ruy_A           33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT----N--KEMVLPMNTGAEAV  106 (392)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred             CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc----C--CCEEEEeCcHHHHH
Confidence            35788999998765544   5899999999988653211 1112333445555555544    5  67999999999999


Q ss_pred             HHHHHHhccC----------CCEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCCCCCCChHHHHHhh
Q 015890          103 VNIVLTLCDA----------GDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus       103 ~~~~~~l~~~----------gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      +.++..+..+          +|+|+++.|+|++....+...+..             +..+ +.      .|+++|++++
T Consensus       107 ~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l  179 (392)
T 3ruy_A          107 ETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI-PY------GDLEALKAAI  179 (392)
T ss_dssp             HHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE-CT------TCHHHHHHHC
T ss_pred             HHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee-Cc------ccHHHHHHHh
Confidence            9999987643          679999999998877665444321             3333 21      2799999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERL-LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      +++  +++|++++|+||||.+++.++ +++|.++|++||+++|+||+|  +.+.+........+....+.|+||.++ +|
T Consensus       180 ~~~--~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~-gG  256 (392)
T 3ruy_A          180 TPN--TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALG-GG  256 (392)
T ss_dssp             CTT--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TT
T ss_pred             ccC--eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhh-CC
Confidence            854  599999999999999996555 999999999999999999999  655554332221111112237789986 56


Q ss_pred             -ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--Ccccc
Q 015890          237 -WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKG  313 (398)
Q Consensus       237 -~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~  313 (398)
                       +|+||++++   +++++.+.......+++.+.+.++++.++++.. .. ++..++++++++++.+.|++++.  +....
T Consensus       257 ~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  331 (392)
T 3ruy_A          257 VFPISCAAAN---RDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-EE-EKLTERSLQLGEKLVGQLKEIDNPMITEVR  331 (392)
T ss_dssp             TSCCEEEEEC---HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-HH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred             hhhhEEEEEC---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-Hh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence             999999998   788777766666667888999999999998752 22 56777888899999999988753  23334


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +. ++++++.++.   +..++.+.|. ++||.+.++.    ++++|++++. .+++++++++++|++++
T Consensus       332 ~~-g~~~~~~~~~---~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          332 GK-GLFIGIELNE---PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             EE-TTEEEEEESS---CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ee-eeEEEEEEcc---hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            44 5566666764   5678888776 8999999874    7899999776 78999999999998875

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=1.6e-34  Score=274.49  Aligned_cols=348  Identities=11%  Similarity=0.056  Sum_probs=236.6

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.+  .++++ .+|++.+++.+++.+.  ..|....+..+.++++++++.+.++.+.++|++++|+++++.
T Consensus        26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~  103 (430)
T 3i4j_A           26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATE  103 (430)
T ss_dssp             TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence            367889999987  45665 3899999999988653  334444566778888888888888888889999999999999


Q ss_pred             HHHHHhc--------cCCCEEEEeCCCCcChhhHHHhcCcEE---------------EEeccCCCC--CCCCChHHHHHh
Q 015890          104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVTH---------------ILVGPCSSK--TLHPDADWLEKT  158 (398)
Q Consensus       104 ~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~--~~~~d~e~l~~~  158 (398)
                      .+++.++        .++++|++.+|+|+++...+...+...               ..+ +.+..  ....|++.|++.
T Consensus       104 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~  182 (430)
T 3i4j_A          104 SAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKL-PKPDPARNGAEDAEGLRAL  182 (430)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEE-CCCCTTSCHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEc-CCCcccchhhHHHHHHHHH
Confidence            9999886        346899999999998776554444321               111 11110  011255889998


Q ss_pred             hcc---CCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccC-CcEEEEccccc
Q 015890          159 LET---KPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG-DHVVNLFSFSK  230 (398)
Q Consensus       159 l~~---~~~~~~v~i~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~-~~~i~~~s~sK  230 (398)
                      ++.   .+ +++|+++.++| ++|. .++.+++++|.++|++||+++|+||+|  +.+.+........ +....+.++||
T Consensus       183 l~~~~~~~-~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK  261 (430)
T 3i4j_A          183 LEREGPET-VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGK  261 (430)
T ss_dssp             HHHHCGGG-EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECG
T ss_pred             HHhcCCCC-EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcc
Confidence            873   22 46666666677 8887 678888999999999999999999999  6555543322222 22222347899


Q ss_pred             ccCCCc-ceeEEEEccCCcHHHHHHHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHh
Q 015890          231 AYGMMG-WRVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       231 ~~~~~G-~r~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      .++ +| +|+||++++   +++++.+...    ....+++.++++++++.++|+..  ++..++..+.....++.+.+.+
T Consensus       262 ~l~-~G~~r~G~~~~~---~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~  337 (430)
T 3i4j_A          262 GLA-AGYAPLAGLLAA---PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQ  337 (430)
T ss_dssp             GGT-TTSSCCEEEEEC---HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc-CCccccEEEEEC---HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence            998 69 999999998   8899888763    44567788999999999988741  2344455555555566666665


Q ss_pred             ccCCCCccccCCccEEEEeeCCCCC--------CChHHHHHHHHHhcCeEEecCCCC--C-CCCeEEEEecC-CCHHHHH
Q 015890          304 SPLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG-LVEDDCK  371 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~--~-~~~~iRi~~~~-~~~~~~~  371 (398)
                      ++++.+....+. ++++++.+....        ....++.+.++ ++||.++|+..+  + ..+++||+++. .++++++
T Consensus       338 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~  415 (430)
T 3i4j_A          338 ARFPQMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVD  415 (430)
T ss_dssp             HHCTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECCCTTCCHHHHH
T ss_pred             HhCCCeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHH
Confidence            566655555565 667777764211        11356777776 889999998432  1 25789999885 6899999


Q ss_pred             HHHHHHHHHHHHH
Q 015890          372 AAADRLRRGLEEL  384 (398)
Q Consensus       372 ~~~~~l~~~~~~~  384 (398)
                      +++++|+++++++
T Consensus       416 ~~l~~l~~~l~~~  428 (430)
T 3i4j_A          416 GLLALLAGALEDV  428 (430)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=1.9e-34  Score=267.99  Aligned_cols=331  Identities=16%  Similarity=0.118  Sum_probs=246.6

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      +.++|+.|  +..+||++.+++.+.+.    +.|+.  ..+..++++.+++++.  ...+++++++++|+++++..++.+
T Consensus         4 ~~~~~~~g--p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g--~~~~~~~v~~~~g~t~a~~~~~~~   75 (366)
T 1m32_A            4 NYLLLTPG--PLTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT--ASEGYTSVLLQGSGSYAVEAVLGS   75 (366)
T ss_dssp             -CEECSSS--SCCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC--SSSSEEEEEEESCHHHHHHHHHHH
T ss_pred             ccccccCC--CcCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC--CCCcCcEEEEecChHHHHHHHHHH
Confidence            36888888  45688999999877532    22211  1677889999998873  111235799999999999999999


Q ss_pred             hccCCCEEEEeC-CCCcC-hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          109 LCDAGDSVVMFA-PYYFN-SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       109 l~~~gd~Vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ++++||+|+++. +.|.. +...++..|.+++.+ +.+.+ +.+|++.|++.+++++++++|++++++||||.+++   +
T Consensus        76 ~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l  150 (366)
T 1m32_A           76 ALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAY-DCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---I  150 (366)
T ss_dssp             SCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEE-ECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---H
T ss_pred             hcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEE-eCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---H
Confidence            999999998876 44443 556778889999988 77654 46899999999986533689999999999999999   8


Q ss_pred             HHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh------
Q 015890          187 KRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------  259 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~------  259 (398)
                      ++|.++|+++|+++|+||+| +.....  .....+.+++++|+||+++ ++.++||++++   +++++.+....      
T Consensus       151 ~~i~~l~~~~~~~li~Dea~~~~~~~~--~~~~~~~di~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~  224 (366)
T 1m32_A          151 DEVGALAHRYGKTYIVDAMSSFGGIPM--DIAALHIDYLISSANKCIQ-GVPGFAFVIAR---EQKLAACKGHSRSLSLD  224 (366)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTC-CCSSEEEEEEE---HHHHTTCTTCCSCSTTC
T ss_pred             HHHHHHHHHcCCEEEEECCccccCcCc--cccccCccEEEecCccccc-CCCceEEEEEC---HHHHHhhcCCCCCcccc
Confidence            99999999999999999999 443221  1122245688999999874 23457999999   67665543210      


Q ss_pred             ------------ccCCCCcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEEe
Q 015890          260 ------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWA  322 (398)
Q Consensus       260 ------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~  322 (398)
                                  ....++.+.+.+.++.++++....+  +++..++++++++++.+.|++++. .+..+   ..++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~  303 (366)
T 1m32_A          225 LYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGF-NTLLDDELHSPIITAF  303 (366)
T ss_dssp             HHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCGGGBCSSEEEE
T ss_pred             HHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCC-eeccCchhcCceEEEE
Confidence                        1113567788888888887753333  577788888999999999987743 55443   34668888


Q ss_pred             eCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       323 ~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .++.. ..+..++.+.|. ++||.+.+|..| .++++|++++. .+++++++++++|.+++++
T Consensus       304 ~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  364 (366)
T 1m32_A          304 YSPEDPQYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYW  364 (366)
T ss_dssp             ECCCCTTCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred             EcCccCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            88741 235778888776 779999998876 57899999997 5799999999999887643

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=3e-35  Score=279.33  Aligned_cols=341  Identities=13%  Similarity=0.122  Sum_probs=243.3

Q ss_pred             cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      +|+.++||+.+.+  +++ ++|.+.+++.+++.+...  ..|.+..+..++++.+++++.   +..+++|++++|+++++
T Consensus        39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~  115 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---GDFAKKTLLVTTGSEAV  115 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---CSSCEEEEEESSHHHHH
T ss_pred             CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---cccccEEEEeCchHHHH
Confidence            5778999988764  443 689999999998865321  135566777888888888873   21247899999999999


Q ss_pred             HHHHH---HhccCCCEEEEeCCCCcChhh-HHHhcCcE-------------EEEeccCCC----CCCCCChHHHHHhhcc
Q 015890          103 VNIVL---TLCDAGDSVVMFAPYYFNSYM-SFQMTGVT-------------HILVGPCSS----KTLHPDADWLEKTLET  161 (398)
Q Consensus       103 ~~~~~---~l~~~gd~Vl~~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~~----~~~~~d~e~l~~~l~~  161 (398)
                      ..++.   .+.++| +|++++|+|+++.. .+...|.+             ++.+ +.+.    .++.+|++.|++.++.
T Consensus       116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~~d~~~l~~~l~~  193 (426)
T 1sff_A          116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKN  193 (426)
T ss_dssp             HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEe-CCCccccccchHHHHHHHHHHHHh
Confidence            99988   666776 99999999988654 45555532             5556 5542    1234689999999873


Q ss_pred             ---CCCCeEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC
Q 015890          162 ---KPTPKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       162 ---~~~~~~v~i~-~p~nptG-~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~  234 (398)
                         ...+++|+++ +++| || ..++.+++++|.++|++||+++|+||+|  +.+.+........+..+.+.|+||.++.
T Consensus       194 ~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~  272 (426)
T 1sff_A          194 DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAG  272 (426)
T ss_dssp             TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGT
T ss_pred             ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccC
Confidence               1225777775 4567 99 7889999999999999999999999999  6555532222222222334599999995


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA  310 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~  310 (398)
                       |+|+||++++   +++++.+.......+++.+++.++++.++|+...+  .+..++++++++++.+.|+.    ++.+.
T Consensus       273 -GlriG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  346 (426)
T 1sff_A          273 -GFPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIG  346 (426)
T ss_dssp             -SSCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             -CCceEEEEEc---HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence             9999999999   77777665433445677889999998887764111  12344555555666555544    33323


Q ss_pred             cccCCccEEEEeeCCCC-------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      ...+. ++++|+.+...       ..+..++..+|+ ++||.+.+|..+  ++++|++++. .+++++++++++|.++++
T Consensus       347 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  422 (426)
T 1sff_A          347 DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFD  422 (426)
T ss_dssp             EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence            33455 78888888421       123556777776 789999998753  6899999874 789999999999999987


Q ss_pred             HH
Q 015890          383 EL  384 (398)
Q Consensus       383 ~~  384 (398)
                      ++
T Consensus       423 ~~  424 (426)
T 1sff_A          423 EA  424 (426)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=8.3e-36  Score=277.88  Aligned_cols=329  Identities=16%  Similarity=0.106  Sum_probs=243.6

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC--------CCCCCCCCCcHHHHHH-HHHHHhhhcCCCCCcEEEecChH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--------ISKYGADEGLPELRDA-LVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~~~~~~~~~-l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      ++++++|+.|.+..++++.+.+++.+.+....        ...|.+..+..++++. +++++    +.+  +|++++|++
T Consensus         6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~~~--~v~~~~g~t   79 (371)
T 2e7j_A            6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----GCD--VARVTNGAR   79 (371)
T ss_dssp             --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----TSS--EEEEESSHH
T ss_pred             CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----CCC--EEEEeCChH
Confidence            35789999877677789999999999876531        1234466778888888 88887    544  899999999


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEecc--CCCCCCCCChHHHHHhhccC---CCCeEEEEeCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--CSSKTLHPDADWLEKTLETK---PTPKLVSVVNPG  174 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~d~e~l~~~l~~~---~~~~~v~i~~p~  174 (398)
                      +++..++.+++++||+|+++.|+|+++...++..|++++.+ +  .+++ +.+|+++|++.++..   +++++|++++|+
T Consensus        80 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~  157 (371)
T 2e7j_A           80 EAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV-PKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPD  157 (371)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEE-CCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred             HHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEe-ecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence            99999999999999999999999999999999999999999 7  5543 578999999999721   235999999999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      ||||.+++   +++|.++|+++|+++|+||+| ....+..  ....+.+++++|+||+++. +.|+||++++   +++++
T Consensus       158 nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~di~~~s~sK~~~~-~~~~G~~~~~---~~~~~  228 (371)
T 2e7j_A          158 GNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMPVS--LKEIGADFIVGSGHKSMAA-SGPIGVMGMK---EEWAE  228 (371)
T ss_dssp             TTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBCCC--HHHHTCSEEEEEHHHHSSC-CSSCEEEEEC---TTTTT
T ss_pred             CCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCCCC--hhhcCCCEEEecCCcCCCC-CCCcEEEEEe---chhhh
Confidence            99999999   799999999999999999999 4322211  1112345889999999974 4599999999   45555


Q ss_pred             H-HHHhhc--cC-----CCCcchHHHHHHHHHhcCCchHHHHHHHHH--HHHHHHHHHHhccCCCCccccCC--ccEEEE
Q 015890          254 Q-LLKVQD--NI-----PICASIISQHLALYSLQTGPEWVTERVKDL--VRNREIIREALSPLGEGAVKGGE--GAIYLW  321 (398)
Q Consensus       254 ~-l~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~  321 (398)
                      . +.....  ..     .++.+...++++..+++....   +..+++  +++++++.+.|++++ +.+..+.  .+.++|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~  304 (371)
T 2e7j_A          229 IVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKLG-IKQLGDNPHNHDLMF  304 (371)
T ss_dssp             TTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHTT-CEEESSSSCCSSEEE
T ss_pred             hhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCccCceEE
Confidence            5 543332  11     345566666666666653111   455666  778888888888774 4665543  366888


Q ss_pred             eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC------CCeEE-EEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGHLR-ISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR-i~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.++    +..++.+.|. ++||.+.| ..+..      ++++| ++++.  .+++++++++++|+++++++
T Consensus       305 ~~~~----~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          305 FHAE----VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  370 (371)
T ss_dssp             EECH----HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EECC----CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence            8886    3567777775 88999988 43321      68899 99995  48999999999999988753

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=5.2e-34  Score=267.71  Aligned_cols=328  Identities=13%  Similarity=0.101  Sum_probs=247.6

Q ss_pred             ccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccCCCEE
Q 015890           38 GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        38 g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      +..+.++++++++++.+.+..    .+.  ....+..+.+.+++.+.++.+.. +|++++|+++++..++.+++++||+|
T Consensus        28 ~p~p~~~~~~v~~a~~~~~~~----~~~--~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v  101 (393)
T 3kgw_A           28 GPGPSNLAPRVLAAGSLRMIG----HMQ--KEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSF  101 (393)
T ss_dssp             SSSCCCCCHHHHHHTTCCCCC----TTS--HHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred             cCCCCCCCHHHHHHhcccccC----ccc--HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence            334667889999988764322    121  12234555556666666677654 59999999999999999999999999


Q ss_pred             EEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015890          117 VMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (398)
Q Consensus       117 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~  193 (398)
                      +++.++|++  +...++..|.+++.+ +.+.++ .+|+++|++.+++ +  +++|++++|+||||.+++   +++|.++|
T Consensus       102 l~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~  174 (393)
T 3kgw_A          102 LTGTNGIWGMRAAEIADRIGARVHQM-IKKPGE-HYTLQEVEEGLAQHK--PVLLFLVHGESSTGVVQP---LDGFGELC  174 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTTHHHHH
T ss_pred             EEEeCCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHHHHHhhCC--CcEEEEeccCCcchhhcc---HHHHHHHH
Confidence            999988864  366778899999999 776554 6899999999986 5  499999999999999999   88999999


Q ss_pred             HHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------------
Q 015890          194 KAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------------  260 (398)
Q Consensus       194 ~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~------------  260 (398)
                      +++|+++|+||+| ++...  ......+.++++.|+||+++ ++.++|+++++   +++++.+.....            
T Consensus       175 ~~~~~~li~De~~~~g~~~--~~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  248 (393)
T 3kgw_A          175 HRYQCLLLVDSVASLGGVP--IYMDQQGIDIMYSSSQKVLN-APPGISLISFN---DKAKYKVYSRKTKPVSFYTDITYL  248 (393)
T ss_dssp             HHTTCEEEEECTTTTTTSC--CCTTTTTCCEEEEESSSTTC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred             HHcCCEEEEECCccccCcc--cchhhcCCCEEEecCccccc-CCCceeEEEEC---HHHHHHHhccCCCCCceeecHHHH
Confidence            9999999999998 44221  22222345688899999874 33448999998   788888764321            


Q ss_pred             -----------cCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeC
Q 015890          261 -----------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARL  324 (398)
Q Consensus       261 -----------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~  324 (398)
                                 ...++.+...+.++.++++... ..+++..+++.++++++.+.|++++. .+..+.    .++++++.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~  327 (393)
T 3kgw_A          249 AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL-KFFVKDPEIRLPTITTVTV  327 (393)
T ss_dssp             HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSSSSGGGBCSSEEEEEC
T ss_pred             HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcCCeEEEEeC
Confidence                       1134567777777777776422 23678888899999999999988854 554322    246677887


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.. .+..++.++|++++||.+.+|..+..++++|+++ +. .+++++++++++|.++++++.+
T Consensus       328 ~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~  390 (393)
T 3kgw_A          328 PAG-YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK  390 (393)
T ss_dssp             CTT-BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred             CCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence            653 3678888888755599999998777788999998 64 4899999999999999988654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=1e-33  Score=266.27  Aligned_cols=324  Identities=19%  Similarity=0.185  Sum_probs=237.2

Q ss_pred             HHHHcCCC-eEEcCCccCCCCCcHHHHHHHHHhhc----CCCCCCCCCCCCcH---HHHHHHHHHHhhhcCCCCCcEEEe
Q 015890           24 ELVRGAKN-AVSLAQGVVYWQPPKMAMEKVKELVW----DPSISKYGADEGLP---ELRDALVKKLNQENKLYKSSVMVT   95 (398)
Q Consensus        24 ~~~~~g~~-~~~l~~g~~~~~~~~~v~~a~~~~~~----~~~~~~y~~~~~~~---~~~~~l~~~l~~~~~~~~~~v~~~   95 (398)
                      +....|.+ ...++.+.|.++.++.+.+++.+.+.    ....+.|+. .+.+   ++++.+++++    +.  ++++++
T Consensus        11 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~--~~~i~~   83 (404)
T 1e5e_A           11 ACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT--EACVAT   83 (404)
T ss_dssp             HHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC--SEEEEE
T ss_pred             eeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC--CcEEEe
Confidence            34444443 34678888999877777666555442    223456755 4554   7888888876    44  367888


Q ss_pred             cChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe
Q 015890           96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV  171 (398)
Q Consensus        96 ~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~  171 (398)
                      +|+++++..++.+++++||+|+++.|+|+++..    .++..|.+++.+ +.+      |++++++.++++  +++|+++
T Consensus        84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~--t~~v~l~  154 (404)
T 1e5e_A           84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-NTA------IPGEVKKHMKPN--TKIVYFE  154 (404)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT------STTHHHHHCCTT--EEEEEEE
T ss_pred             CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC------CHHHHHHhcCCC--CcEEEEE
Confidence            888899999999999999999999999998887    678899999988 653      788999999875  4999999


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccCC
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSE  247 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~-~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~  247 (398)
                      +|+||||.+++   +++|+++|++ +|+++|+||+|  +.+. .+.   ..++++++.|+||.++.+|+|+ ||++++  
T Consensus       155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~-~~~---~~~~di~~~S~sK~~~~~g~ri~G~~~~~--  225 (404)
T 1e5e_A          155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT-NPV---DFGVDVVVHSATKYINGHTDVVAGLICGK--  225 (404)
T ss_dssp             SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC-CGG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC--
T ss_pred             CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC-Ccc---ccCCEEEEEcCccccCCCCCCeEEEEEEC--
Confidence            99999999998   9999999999 99999999999  3332 111   2357799999999999999998 999999  


Q ss_pred             cHHHHH-HHHHhhccC-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--------------CCcc
Q 015890          248 VEGFAT-QLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAV  311 (398)
Q Consensus       248 ~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~  311 (398)
                       +++++ .+......+ ..+.+++.++++..+++.    ...+.+....+.+.+.+.+++.+              ...+
T Consensus       226 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~  300 (404)
T 1e5e_A          226 -ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDI  300 (404)
T ss_dssp             -HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHH
T ss_pred             -HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHH
Confidence             67777 787766554 456788888888888875    23334444555555555554432              2222


Q ss_pred             ccC----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------------------------CCeEEE
Q 015890          312 KGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------------------------RGHLRI  360 (398)
Q Consensus       312 ~~~----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------------------~~~iRi  360 (398)
                      ..+    .++++.| +++.    ..+...+++++.||.+ ++..|+.                           +++|||
T Consensus       301 ~~~~~~~~g~~~~~-~~~~----~~~~~~~~l~~~~i~~-~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi  374 (404)
T 1e5e_A          301 AKKQMRMYGSMITF-ILKS----GFEGAKKLLDNLKLIT-LAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRL  374 (404)
T ss_dssp             HHHHCSSCCSEEEE-EETT----HHHHHHHHHHTCSSSE-ESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred             HHhhCCCCceEEEE-EeCC----CHHHHHHHHHhCCCce-eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence            222    2445554 7753    2344555777889944 4433321                           579999


Q ss_pred             EecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          361 SFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       361 ~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      |++.   +++++++++|++++..+.+
T Consensus       375 s~g~---e~~~~li~~l~~al~~~~~  397 (404)
T 1e5e_A          375 SVGI---EDADELIADFKQGLDALLR  397 (404)
T ss_dssp             ECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred             EeCC---CCHHHHHHHHHHHHHHHHH
Confidence            9996   8899999999999988765

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=100.00  E-value=3.4e-34  Score=265.64  Aligned_cols=332  Identities=13%  Similarity=0.079  Sum_probs=244.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ..+.+++|+.+.+. ++++.+.+++.+.+..     |....+..++++.+++++.+.+|.++++|++++|+++++..++.
T Consensus        11 ~~p~~i~l~~~~~~-~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~   84 (359)
T 1svv_A           11 AKPKPYSFVNDYSV-GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACS   84 (359)
T ss_dssp             ----CEECSCSCSS-CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHH
T ss_pred             CCCeeEEecCCCcC-CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHH
Confidence            33568999987666 6799999999998743     55666778899999999999888888899999999999999999


Q ss_pred             HhccCCCEEEEeCCCCcChhh--HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-----CCeEEEEeCCCCCCccC
Q 015890          108 TLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-----TPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-----~~~~v~i~~p~nptG~~  180 (398)
                      +++++||+|+++.|+|+++..  .++..|.+++.+ +.+  ++.+|++.|++.++++.     .+++|++++| ||||.+
T Consensus        85 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~  160 (359)
T 1svv_A           85 LALRPWEAVIATQLGHISTHETGAIEATGHKVVTA-PCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQ  160 (359)
T ss_dssp             HHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEE-CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCC
T ss_pred             HHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEE-eCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCcee
Confidence            999999999999999988877  478899999999 765  46789999999997641     2589999998 799999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccccc----CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      ++.+++++|+++|+++|+++|+||+|  +.....+.....    ....+++.|.+|..+  ..++|+++.+   +++++.
T Consensus       161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~---~~~~~~  235 (359)
T 1svv_A          161 YTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILN---DALKPN  235 (359)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECS---GGGCTT
T ss_pred             cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEc---ccHHHH
Confidence            99999999999999999999999999  322221111110    112367788999744  3457999988   566555


Q ss_pred             HHHhh--ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChH
Q 015890          255 LLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF  332 (398)
Q Consensus       255 l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (398)
                      +....  ....+..+.+...++..+++.  ..+++..+++.++++++.+.| +.+++.+..+.+++++|+.++      .
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------~  306 (359)
T 1svv_A          236 ARHLIKQRGALMAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------N  306 (359)
T ss_dssp             HHHHHHHTTCCCTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------H
T ss_pred             HHHHHhcCCcccccchhhHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------H
Confidence            55432  111122222333334445554  345778888889999999988 444557776777888888764      3


Q ss_pred             HHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++.++|++++||.+.+. ....++++|++++. .+++++++++++|+++++++
T Consensus       307 ~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          307 TMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             HHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence            77787764449998321 11245789999876 68999999999999887653

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.7e-34  Score=269.33  Aligned_cols=327  Identities=14%  Similarity=0.060  Sum_probs=241.6

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      +.+.|+.+.+. ++|+.+++++.+.+.+..   ...|..    .....++++.+++++    +.++++|++++|+++++.
T Consensus        26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~al~  100 (406)
T 3cai_A           26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----NADPGGVVLGADRAVLLS  100 (406)
T ss_dssp             SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----TCCGGGEEEESCHHHHHH
T ss_pred             CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCChHHHHH
Confidence            47888887766 678999999998876421   112321    223445555555554    777789999999999999


Q ss_pred             HHHHHh---ccCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          104 NIVLTL---CDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       104 ~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      .++.++   .++||+|+++.|+|+++...+..    .|.+++.+ +.+..++.+|++.|++.++++  +++|++++|+||
T Consensus       101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~l~~~--~~~v~~~~~~np  177 (406)
T 3cai_A          101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWA-EVDIETGELPTWQWESLISKS--TRLVAVNSASGT  177 (406)
T ss_dssp             HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEE-CCCTTTCCCCGGGHHHHCCTT--EEEEEEESBCTT
T ss_pred             HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEE-ecCcccCCcCHHHHHHHhCCC--ceEEEEeCCcCC
Confidence            999988   78999999999999887655543    69999999 776444578999999999865  499999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeE-EEEccCCcHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQ  254 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~  254 (398)
                      ||.+++   +++|.++|+++|+++|+|++| ++.....  ....+.+++++|+||++| ++  +| |++++   +++++.
T Consensus       178 tG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~---~~~~~~  246 (406)
T 3cai_A          178 LGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRLLD--IRETDADVVTVNAHAWGG-PP--IGAMVFRD---PSVMNS  246 (406)
T ss_dssp             TCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCCCC--HHHHCCSEEEEEGGGGTS-CS--CEEEEESC---HHHHHT
T ss_pred             ccccCC---HHHHHHHHHHcCCEEEEEcccccCCCCCC--chhcCCCEEEeehhhhcC-CC--cCeEEEEe---hHHHhh
Confidence            999999   889999999999999999999 4432211  111235688999999886 44  89 99998   777766


Q ss_pred             HHHhhc---------cCCCCcchHHHHHHHHHhcCCch---------------HHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          255 LLKVQD---------NIPICASIISQHLALYSLQTGPE---------------WVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       255 l~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      +.....         ....+.+...+.++.++++....               ++++..+++.++++++.+.|++++++.
T Consensus       247 l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  326 (406)
T 3cai_A          247 FGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVM  326 (406)
T ss_dssp             SCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             cCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence            644321         11345566666565555543111               567788888899999999998876555


Q ss_pred             cccCC--ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC------CCC---CCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          311 VKGGE--GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACG---CRGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       311 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      +..+.  .+.++++.++.  .+..++.+.|. ++||.+.+|.      .++   ..+++|++++. .+++++++++++|+
T Consensus       327 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~-~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~  403 (406)
T 3cai_A          327 LIGRPEAQIPVVSFAVHK--VPADRVVQRLA-DNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALA  403 (406)
T ss_dssp             ECCCCSSBCSEEEEEETT--BCHHHHHHHHH-HTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred             EcCCccccCCEEEEEECC--cCHHHHHHHHH-HCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHH
Confidence            55542  13367777763  35777888775 7899999987      233   24789999997 68899999998886


Q ss_pred             H
Q 015890          379 R  379 (398)
Q Consensus       379 ~  379 (398)
                      +
T Consensus       404 ~  404 (406)
T 3cai_A          404 S  404 (406)
T ss_dssp             T
T ss_pred             H
Confidence            4

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=1.8e-34  Score=271.82  Aligned_cols=329  Identities=17%  Similarity=0.134  Sum_probs=250.0

Q ss_pred             cCCCeEEcCCccCCCC--CcHHHHHHHHHhhcC-CCC---CCCC--CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChH
Q 015890           28 GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWD-PSI---SKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN   99 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~-~~~---~~y~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t   99 (398)
                      +|+.++||+.|. +++  ++|.+.+++.+.+.. ...   ..|.  ...+..++++.+++++    +.+ ++++ +++++
T Consensus        43 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-~~i~-~~sGs  115 (401)
T 1fc4_A           43 DGSHVINFCANN-YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GME-DAIL-YSSCF  115 (401)
T ss_dssp             TSCEEEECCCSC-TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TCS-EEEE-ESCHH
T ss_pred             CCccEEEeeccC-cccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CCC-cEEE-eCChH
Confidence            578899999994 565  589999999888754 111   1221  1345677888888777    555 4554 45557


Q ss_pred             HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCC
Q 015890          100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN  175 (398)
Q Consensus       100 ~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~n  175 (398)
                      +++..++.+++++||.|+++.|+|..+...++..|.+++.+ +.      .|++++++.++..    .++++|++++|+|
T Consensus       116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n  188 (401)
T 1fc4_A          116 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMQELEARLKEAREAGARHVLIATDGVFS  188 (401)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CT------TCHHHHHHHHHHHHHTTCSSEEEEEESEET
T ss_pred             HHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEE-CC------CCHHHHHHHHHHhhccCCCceEEEEeCCcC
Confidence            89999999999999999999999988888899999999888 52      3788999988741    0259999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC---CCcc---ccccCCcEEEEccccccc-CCCcceeEEEEccCC
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD---GRKH---CCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSE  247 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~---~~~~---~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~  247 (398)
                      |||.+++   +++|.++|+++|+++|+||+| +.+.   +...   .....+.+++++|+||.+ |++|   ||++++  
T Consensus       189 ptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~--  260 (401)
T 1fc4_A          189 MDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR--  260 (401)
T ss_dssp             TTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC--
T ss_pred             CCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC--
Confidence            9999999   999999999999999999999 4543   2211   111234568899999999 5444   999998  


Q ss_pred             cHHHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCC
Q 015890          248 VEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP  325 (398)
Q Consensus       248 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  325 (398)
                       +++++.+.....  ..+.+.+.+.++++.++++.... .++..++++++++++.+.|++++. .+. +..++++|+.++
T Consensus       261 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~  336 (401)
T 1fc4_A          261 -KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSAAGF-TLA-GADHAIIPVMLG  336 (401)
T ss_dssp             -HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTTC-CBC-CSSSSEEEEEEE
T ss_pred             -HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccc-CCCCCEEEEEcC
Confidence             788888876442  22557888999988888875211 356778888889999999988754 555 445788888886


Q ss_pred             CCCCChHHHHHHHHHhcCeEEecCCCCCC---CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          326 EKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .. .+..++.+.|. ++||.+.++..|+.   .+++|++++. .+++++++++++|.++++++
T Consensus       337 ~~-~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  397 (401)
T 1fc4_A          337 DA-VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             CH-HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             Ch-HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            42 24567777775 77999999887653   3589999986 68999999999999998875

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=2.5e-34  Score=270.76  Aligned_cols=331  Identities=14%  Similarity=0.084  Sum_probs=243.7

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~------~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+++++|..+.+ +++.+|.+.+++.+.+.+..      ...|+...+..++++.+++++    +. +++|++++|++ 
T Consensus        44 ~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-~~~i~~~sG~~-  117 (401)
T 2bwn_A           44 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----QK-EAALVFSSAYN-  117 (401)
T ss_dssp             CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----TC-SEEEEESCHHH-
T ss_pred             CCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----CC-CcEEEECCcHH-
Confidence            3566889988765 55567899999998875411      122444456677888888877    43 56788877765 


Q ss_pred             HHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC--CCCeEEEEeCCCCC
Q 015890          101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~np  176 (398)
                      ++..++..+.  .+||.|+++.|+|+++...++..|.+++.+ +.+      |++++++.++..  .++++|++++|+||
T Consensus       118 a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~le~~l~~~~~~~~~~v~~~~~~np  190 (401)
T 2bwn_A          118 ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RHN------DVAHLRELIAADDPAAPKLIAFESVYSM  190 (401)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTT
T ss_pred             HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEE-cCC------CHHHHHHHHHhhccCCceEEEEecCcCC
Confidence            7777777654  589999999999999999899999999988 653      688888888721  13599999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-c--CCCccccc-c--CCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-Y--DGRKHCCV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~--~~~~~~~~-~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      ||.+++   +++|.++|+++|+++|+||+| .+ +  .+...... .  .+.+++++|+||.+|++|   ||++.+   +
T Consensus       191 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~---~  261 (401)
T 2bwn_A          191 DGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---A  261 (401)
T ss_dssp             TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---H
T ss_pred             CCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC---H
Confidence            999999   899999999999999999999 33 3  22221111 1  123688999999999777   999988   7


Q ss_pred             HHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCC
Q 015890          250 GFATQLLKVQDN--IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE  326 (398)
Q Consensus       250 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  326 (398)
                      ++++.+......  ...+.+++.++++.++++... ..+++..++++++++++.+.|++.+ +.+..+. +.++++.++.
T Consensus       262 ~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~  339 (401)
T 2bwn_A          262 RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHG-SHIVPVVIGD  339 (401)
T ss_dssp             HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCS-SSCEEEECCC
T ss_pred             HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-CCeEEEEeCC
Confidence            887777643221  122334577777777776422 2346778888888999999888774 3666666 4578888864


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCCCC---CeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      . .+..++.++|++++||.+.|+..++.+   +++|++++. .+++++++++++|++++++
T Consensus       340 ~-~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          340 P-VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             H-HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred             h-HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence            2 245677777766789999998876533   589999996 6899999999999988764

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=2.3e-33  Score=265.38  Aligned_cols=325  Identities=13%  Similarity=0.113  Sum_probs=247.2

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEE-EecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVM-VTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~-~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      +..+++.+.+++.+..    ...|.  ....+..+.+.+++.++++.++++++ +++|+++++..++.+++++||+|+++
T Consensus        19 p~~~~~~v~~a~~~~~----~~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~   92 (416)
T 3isl_A           19 PVEVDPRVLRVMSTPV----VGQFD--PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIP   92 (416)
T ss_dssp             SCCCCHHHHHHTTSCC----CCTTS--HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CcCcCHHHHHHhcccC----CCCcc--HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEe
Confidence            5556788877765521    22232  22355667777777777788777665 88999999999999999999999999


Q ss_pred             CCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      .|+|++  +...++..|.+++.+ +.+.++ .+|+++++++++ +++  ++|++++|+||||.+.+   +++|.++|+++
T Consensus        93 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~  165 (416)
T 3isl_A           93 IYGRFGYLLTEIAERYGANVHML-ECEWGT-VFDPEDIIREIKKVKP--KIVAMVHGETSTGRIHP---LKAIGEACRTE  165 (416)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CHHHHHHHHHT
T ss_pred             cCCcccHHHHHHHHhcCCeeEEE-ecCCCC-CCCHHHHHHHHhhCCC--cEEEEEccCCCCceecC---HHHHHHHHHHc
Confidence            999987  777888999999999 877654 789999999998 454  99999999999999999   89999999999


Q ss_pred             CCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015890          197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------------  259 (398)
Q Consensus       197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----------------  259 (398)
                      |+++|+|++| ++....  .....+.+++++|++|+++ ++.++|+++.+   +++++.+....                
T Consensus       166 ~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~---~~~~~~~~~~~~~~~Gw~~~~~~~~~~  239 (416)
T 3isl_A          166 DALFIVDAVATIGGCEV--KVDEWKIDAAIGGTQKCLS-VPSGMAPITYN---ERVADVIAARKKVERGIATQADRAALS  239 (416)
T ss_dssp             TCEEEEECTTTTTTSCC--CTTTTTCSEEECCSSSTTC-CCSSEEEEEEC---HHHHHHHHTC-----------------
T ss_pred             CCEEEEECCccccCCCc--chhhcCCCEEEecCccccC-CCCCeEEEEEC---HHHHHHhhccccccccccccccchhcc
Confidence            9999999998 443221  1122345688999999753 34458999998   78877776321                


Q ss_pred             ----------------------ccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          260 ----------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       260 ----------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                                            .....+.+...+.++.++++....+ +++..+++.++++++.+.|++.+. .+..+.+
T Consensus       240 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~  318 (416)
T 3isl_A          240 GNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGL-RLFGDDS  318 (416)
T ss_dssp             -CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGG
T ss_pred             CCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeccCcc
Confidence                                  1123456777787777777653344 678888999999999999988644 5655543


Q ss_pred             ---cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH-HHHHHHHHHHHHHHHhc
Q 015890          317 ---AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD-CKAAADRLRRGLEELVK  386 (398)
Q Consensus       317 ---~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~-~~~~~~~l~~~~~~~~~  386 (398)
                         ++++++.+++. .+..++.+.|++++||.+++|.....++++|++++. .++++ +++++++|+++++++..
T Consensus       319 ~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~  392 (416)
T 3isl_A          319 CKMPVVTCVEIPGG-IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA  392 (416)
T ss_dssp             GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCcEEEEeCCCC-CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence               56778888643 367888888875569999998865567899999944 44555 99999999999988753

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=9.4e-34  Score=267.32  Aligned_cols=350  Identities=15%  Similarity=0.122  Sum_probs=252.6

Q ss_pred             chHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCC---CcHH--HHHH-HHHHHhhhcCCCC
Q 015890           16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE---GLPE--LRDA-LVKKLNQENKLYK   89 (398)
Q Consensus        16 ~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---~~~~--~~~~-l~~~l~~~~~~~~   89 (398)
                      ...+..+.+......++++|..|.+++  ||.+.+++.+.+.+.....|+...   |.+.  +++. ..+++.+.++.++
T Consensus         9 ~~i~~~~~~~~~~~~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~   86 (407)
T 2dkj_A            9 EALFELIALEEKRQREGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW   86 (407)
T ss_dssp             HHHHHHHHHHHHHHHTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHHHHHhhcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence            344555555555557899999999887  899999999988642234564332   3332  3333 3346666667766


Q ss_pred             CcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh---hHHHhcCc--EEEEeccCCCCCCCCChHHHHHhhcc-CC
Q 015890           90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGV--THILVGPCSSKTLHPDADWLEKTLET-KP  163 (398)
Q Consensus        90 ~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~d~e~l~~~l~~-~~  163 (398)
                      ++|++++| ++++..++.+++++||+|+++.|+|+++.   ..++..|.  .++.+ +.+++++.+|++.+++.++. + 
T Consensus        87 ~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~-  163 (407)
T 2dkj_A           87 ANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSY-GVRPDTELIDLEEVRRLALEHR-  163 (407)
T ss_dssp             EECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CCCTTTSSCCHHHHHHHHHHHC-
T ss_pred             ceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEec-CCCcccCccCHHHHHHHHhhcC-
Confidence            55666665 56999999999999999999999998873   44455565  55555 54544567899999999984 4 


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                       +++|++++|+||  ...+   +++|.++|+++|+++|+||+| .  .+.+....... ..+++++|+||++  +|+|+|
T Consensus       164 -~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g~~~G  234 (407)
T 2dkj_A          164 -PKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTL--RGPRGG  234 (407)
T ss_dssp             -CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGG--CCCSCE
T ss_pred             -CeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccC--CCCCce
Confidence             489999889997  5667   899999999999999999999 3  33343222121 2568899999966  478899


Q ss_pred             EEEccCCcHHHHHHHHHhhccCC-CCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc
Q 015890          241 YIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA  317 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~  317 (398)
                      |+++++  +++++.+......+. .+.+.....++.++++.. ..++++..++++++++++.+.|++.+. .+.. +..+
T Consensus       235 ~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~  311 (407)
T 2dkj_A          235 LILSND--PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGY-RIVTGGTDN  311 (407)
T ss_dssp             EEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSS
T ss_pred             EEEECC--HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCc-eeecCCCCc
Confidence            999885  577777776553333 334444444556666542 356788888999999999999988754 5554 3458


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++++.++....+..++...| .++||.+.++..+      ..++++|++++.     .+++++++++++|++++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          312 HLFLVDLRPKGLTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             SEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             eEEEEECcccCCCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            889999874323567777766 5899999998753      235789999863     4889999999999999887

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=7e-35  Score=273.42  Aligned_cols=328  Identities=15%  Similarity=0.074  Sum_probs=243.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CC---CCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---IS---KYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      ++.++|+.+... +.|+.+++++.+.+.+..   ..   .|+. ..+..++++.+++++    ++++++|++++|+++++
T Consensus        15 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~   89 (390)
T 1elu_A           15 ANKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----NVDPNTITITDNVTTGC   89 (390)
T ss_dssp             TTSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----TSCGGGEEEESSHHHHH
T ss_pred             CCeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----CCCHHHEEEeCChHHHH
Confidence            568899888643 567889999988875421   01   2322 245566777777765    77778999999999999


Q ss_pred             HHHHHHh-ccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          103 VNIVLTL-CDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       103 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      ..++.++ .++||+|+++.|+|+++...    ++..|.+++.+ +.+. +++.+|++.|++.++++  +++|++++|+||
T Consensus        90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~np  166 (390)
T 1elu_A           90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPK--TRLVILSHLLWN  166 (390)
T ss_dssp             HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTT--EEEEEEESBCTT
T ss_pred             HHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE-cCCCCCCccchHHHHHHhcCCC--ceEEEEeccccC
Confidence            9999999 79999999999999886643    46779999988 7652 34678999999999865  599999999999


Q ss_pred             CccCCCHHHHHHHHHHHH----HcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          177 SGTYIPERLLKRISDLCK----AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~----~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      ||.+++   +++|.++|+    ++|+++|+||+| ++....  .....+.+++++|+||++. +|.++||++++   +++
T Consensus       167 tG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~--~~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~  237 (390)
T 1elu_A          167 TGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPL--DFSRLEVDYYAFTGHKWFA-GPAGVGGLYIH---GDC  237 (390)
T ss_dssp             TCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBCC--CTTTSCCSEEEEESSSTTC-CCTTCEEEEEC---TTT
T ss_pred             CceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcCC--ChhhcCCCEEEcccccccc-CCCceEEEEEC---HHh
Confidence            999999   899999999    999999999999 543221  1122345688999999443 46678999998   555


Q ss_pred             HHHHHHhh----------------------ccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          252 ATQLLKVQ----------------------DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       252 ~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      ++.+....                      ....++.+...+.++..+++..  .+++++..++++++++++.+.|++++
T Consensus       238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  317 (390)
T 1elu_A          238 LGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLP  317 (390)
T ss_dssp             GGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred             HhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            55543311                      1123455667777666666531  12467788889999999999998875


Q ss_pred             CCccccC--CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          308 EGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       308 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      ++.+..+  ..+.++++.++.. .+..++.++|. ++||.+.++.   .++++||+++. .+++++++++++|++
T Consensus       318 g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~  387 (390)
T 1elu_A          318 HVHCLATSAPQAGLVSFTVDSP-LGHRAIVQKLE-EQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLAD  387 (390)
T ss_dssp             TEEESCSSCCSSSEEEEEECSS-SCHHHHHHHHH-HTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             CcEEecCccccccEEEEEcCCC-CCHHHHHHHHH-HCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHh
Confidence            5465532  1245555577533 35778888874 8899999976   46899999965 789999999988864

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.4e-33  Score=265.21  Aligned_cols=332  Identities=14%  Similarity=0.124  Sum_probs=242.8

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.|  .++++ .+|++.+++.+++.+.. +.  ......+.++.+++++.+.++  .+++++++|+++|+.
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~--~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~  107 (395)
T 3nx3_A           33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HT--SNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIE  107 (395)
T ss_dssp             TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CC--CTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-cc--ccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHH
Confidence            367889999988  45555 58999999999886632 22  222345667777777777666  678999999999999


Q ss_pred             HHHHHhc-------cCCCEEEEeCCCCcChhhHHHhcC-------------cEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890          104 NIVLTLC-------DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus       104 ~~~~~l~-------~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      .++..+.       .++++|++++|+|+++...+...+             .++..+ +.      .|+++|+++++++ 
T Consensus       108 ~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~-  179 (395)
T 3nx3_A          108 GAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA-KY------NDISSVEKLVNEK-  179 (395)
T ss_dssp             HHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE-CT------TCHHHHHTTCCTT-
T ss_pred             HHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe-CC------CCHHHHHHhccCC-
Confidence            9998875       347999999999988765444333             233333 22      2799999999855 


Q ss_pred             CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890          164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                       +++|++.+++|++|.+ ++++++++|.++|++||+++|+||+|  ++..+........+....+.|+||.++ +|+|+|
T Consensus       180 -~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~-~G~~~G  257 (395)
T 3nx3_A          180 -TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALG-CGLSVG  257 (395)
T ss_dssp             -EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGT-TTSCCE
T ss_pred             -eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEeccccc-CCCceE
Confidence             4888888888888876 77888999999999999999999999  555443322222222233457899998 599999


Q ss_pred             EEEccCCcHHH-HHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          241 YIAYPSEVEGF-ATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       241 ~i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |++++   +++ ++.+.......+++.++++++++.++++..  +++.++..+.....++.+.+.+..++.+....+. +
T Consensus       258 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g  333 (395)
T 3nx3_A          258 AFVIN---QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL-G  333 (395)
T ss_dssp             EEEEC---HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-T
T ss_pred             EEEEc---hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE-E
Confidence            99999   777 777766555567788999999998888741  2344444444455556666655555543444444 6


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++++.++.. .+..+++..++ ++||.+.++.    ++++||+++. .+++++++++++|++++++
T Consensus       334 ~~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          334 FMQGLSLDKS-VKVAKVIQKCQ-ENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             TEEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCCc-chHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            7888888753 25677888775 7899999863    7899999777 6899999999999998764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=2.1e-33  Score=262.43  Aligned_cols=325  Identities=18%  Similarity=0.149  Sum_probs=240.8

Q ss_pred             CCcHHHHHHHHHhhcCCCC---CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc----cCCCE
Q 015890           43 QPPKMAMEKVKELVWDPSI---SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS  115 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~---~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~----~~gd~  115 (398)
                      ++||.+.+++.+.+.+...   ..|....+..+..+.+.+++.++++.+++++++++|+++++..++.++.    ++||+
T Consensus        11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~   90 (382)
T 4hvk_A           11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH   90 (382)
T ss_dssp             CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred             CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence            5689999999998865211   1121122335566677777777778888899999999999999999998    89999


Q ss_pred             EEEeCCCCcChhhHHHh---cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          116 VVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       116 Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      |+++.++|+++...++.   .|++++.+ +.+++ +.+|+++|++.+++++  ++|++++|+||||.+.+   +++|.++
T Consensus        91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l  163 (382)
T 4hvk_A           91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV  163 (382)
T ss_dssp             EEEETTCCHHHHHHHHHHHHTTCEEEEE-CBCTT-SCBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHHHhcCCEEEEe-ccCCC-CCcCHHHHHHHhccCc--eEEEEECCCCCceeeCC---HHHHHHH
Confidence            99999999887765544   69999999 87754 4789999999998765  99999999999999999   8899999


Q ss_pred             HHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCCC
Q 015890          193 CKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIPI  264 (398)
Q Consensus       193 ~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-------~~~~~  264 (398)
                      |+++|+ +|+|++| ++.....  ....+.+++++|+||.+|++|  +|+++++++   .  .+....       .....
T Consensus       164 ~~~~~~-li~D~a~~~~~~~~~--~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~---~--~~~~~~~~~~~~~~~~~~  233 (382)
T 4hvk_A          164 LAGKAA-LHIDATASVGQIEVD--VEKIGADMLTISSNDIYGPKG--VGALWIRKE---A--KLQPVILGGGQENGLRSG  233 (382)
T ss_dssp             HSSSSE-EEEECTTTBTTBCCC--HHHHTCSEEEEESGGGTSCTT--CEEEEEETT---C--CCCCSSCSSCTGGGTSCS
T ss_pred             HHHcCE-EEEEhHHhcCCCCCC--chhcCCCEEEEeHHHhcCCCc--eEEEEEcCc---c--CcCcccccCCCcCccccC
Confidence            999999 9999998 5432211  111234588999999887656  677776642   1  111111       11234


Q ss_pred             CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          265 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                      +.+...+.++..+++...+++++..+++.++++++.+.|++++++.+..+..   .+++++.++.  .+..++.+.| .+
T Consensus       234 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~  310 (382)
T 4hvk_A          234 SENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSL-DM  310 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--CCHHHHHHHH-HH
T ss_pred             CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC--CCHHHHHHHH-HH
Confidence            5577777777777764345678888999999999999999887656655442   3456666653  3567788776 47


Q ss_pred             cCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          342 HGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       342 ~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +||.+++|..|..                   ++++|++++. .+++++++++++|+++++++.+.
T Consensus       311 ~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~  376 (382)
T 4hvk_A          311 AGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM  376 (382)
T ss_dssp             TTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            8999999976642                   5789999997 68999999999999999887653

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=1.5e-33  Score=269.74  Aligned_cols=345  Identities=13%  Similarity=0.042  Sum_probs=246.8

Q ss_pred             cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||..|  .++++ .+|++.+++.+++.+.. +.|....+..+.++++++++.+.++.+.++|++++|+++|++.
T Consensus        48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~  126 (459)
T 4a6r_A           48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT  126 (459)
T ss_dssp             TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence            57889999987  45554 47999999999887532 2343444566788888888888888778899999999999999


Q ss_pred             HHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015890          105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD--------  151 (398)
Q Consensus       105 ~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d--------  151 (398)
                      +++.++.        ++++|++..|+|+++...+...+.             .+..+ +.+.    ..+ .|        
T Consensus       127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~-~d~~~~~~~~  204 (459)
T 4a6r_A          127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHI-EQPWWYKHGKD-MTPDEFGVVA  204 (459)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEe-CCCccccCCcc-cCHHHHHHHH
Confidence            9999875        468999999999987765544322             22233 2211    111 23        


Q ss_pred             hHHHHHhhcc---CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          152 ADWLEKTLET---KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       152 ~e~l~~~l~~---~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      +++|++.++.   .+ +++|+++.+++++|. .++++++++|.++|++||+++|+||+|  |++.|........+....+
T Consensus       205 ~~~le~~i~~~~~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi  283 (459)
T 4a6r_A          205 ARWLEEKILEIGADK-VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDL  283 (459)
T ss_dssp             HHHHHHHHHHHCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred             HHHHHHHHHHcCCCC-EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe
Confidence            7888888862   22 466666666666776 458999999999999999999999999  6565533222111111223


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCCCcchHHHHHHHHHhcCC--chHHHHHH-HHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREII  299 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l  299 (398)
                      .++||.++.+|+|+|+++++   +++++.+.   ......+++.++++++++.++|+..  ++..++.. +.....++.+
T Consensus       284 ~t~sK~l~gg~~~lg~v~~~---~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l  360 (459)
T 4a6r_A          284 FTAAKGLSSGYLPIGAVFVG---KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRW  360 (459)
T ss_dssp             EEECGGGGTTSSCCEEEEEC---HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHH
T ss_pred             eehhhhhcCCCCCccceeeC---HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            36889997444999999998   88888887   3344457788999999999999742  23444555 4555556666


Q ss_pred             HHHhccCCCCccccCCccEEEEeeCCCCCCC----------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHH
Q 015890          300 REALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED  368 (398)
Q Consensus       300 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~  368 (398)
                      .+.|++++.+....+. ++++++.+.....+          ..++...++ ++||.++++.     +++||+++. .+++
T Consensus       361 ~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~~~~~~t~e  433 (459)
T 4a6r_A          361 RETFSRFEHVDDVRGV-GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG-----DHIVSAPPLVMTRA  433 (459)
T ss_dssp             HHHHTTCTTEEEEEEE-TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET-----TEEEECCCTTCCHH
T ss_pred             HHHHhcCCCeEEEEEE-EEEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC-----CEEEEECCCCCCHH
Confidence            6667766665555566 66666766532111          456677665 7899999863     899999766 6999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 015890          369 DCKAAADRLRRGLEELVK  386 (398)
Q Consensus       369 ~~~~~~~~l~~~~~~~~~  386 (398)
                      ++++++++|.++++++..
T Consensus       434 ~i~~~l~~l~~~l~~~~~  451 (459)
T 4a6r_A          434 EVDEMLAVAERCLEEFEQ  451 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999988764

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=2.4e-33  Score=268.53  Aligned_cols=348  Identities=12%  Similarity=-0.008  Sum_probs=250.7

Q ss_pred             cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||..|  .++++ .+|++.+++.+++.+. .+.|....+..+.+.++++++.+.++.+.++|++++|+++|++.
T Consensus        49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~  127 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNL-AYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET  127 (460)
T ss_dssp             TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHH-SCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            57889999987  44554 4799999999988653 22343444556778888888888777777899999999999999


Q ss_pred             HHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015890          105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD--------  151 (398)
Q Consensus       105 ~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d--------  151 (398)
                      ++++++.        ++++|++.+++|+++...+...+.             .+..+ +.+.    +....+        
T Consensus       128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~g~~~~~~~~~~  206 (460)
T 3gju_A          128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHT-EAPYYFRRTDRSMSEEQFSQHC  206 (460)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEE-CCCCGGGCSCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEe-CCCccccCCccccChhHHHHHH
Confidence            9999874        458999999999987755543321             23334 3221    111122        


Q ss_pred             hHHHHHhhcc--CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLET--KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      +++|++.++.  ...+++|+++.++|++|. +++++++++|.++|++||+++|+||+|  +++.|........+....+.
T Consensus       207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~  286 (460)
T 3gju_A          207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI  286 (460)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence            6889888862  122577888877888887 678888999999999999999999999  65555332221111122234


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  296 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  296 (398)
                      ++||+++ +| +|+||++++   +++++.+...       ....+++.++++++++.++|+..  ++..++..+.....+
T Consensus       287 t~sK~l~-gG~~~lg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~  362 (460)
T 3gju_A          287 TIAKGLT-SAYAPLSGVIVA---DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR  362 (460)
T ss_dssp             EECGGGT-TTSSCCEEEEEE---HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             eeehhhc-CCCCCeEEEEEC---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            7889997 56 899999999   8888888532       34457788999999999999741  345566666667777


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      +.+.+.+++++.+....+. ++++++.+.....          ...++...++ ++||.++++.   ..+++||+++. .
T Consensus       363 ~~l~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---~~~~iRi~~~~~~  437 (460)
T 3gju_A          363 AELAKAVGGHKNVGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMP---QGDILGFAPPLCL  437 (460)
T ss_dssp             HHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECS---SSCEEEECCCTTC
T ss_pred             HHHHHHHhcCCCeEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCC---CCCEEEEECCCCC
Confidence            7887888877765555565 6667777653211          1345667665 7899999975   45899999765 6


Q ss_pred             CHHHHHHHHHHHHHHHHHHhc
Q 015890          366 VEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++++++|.++++++..
T Consensus       438 t~e~i~~~l~~l~~~l~~~~~  458 (460)
T 3gju_A          438 TREQADIVVSKTADAVKSVFA  458 (460)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999988653

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=1.2e-33  Score=260.94  Aligned_cols=324  Identities=17%  Similarity=0.195  Sum_probs=231.8

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      +++++|+.+.++. +++.+++++.+....  ...|.+.++..++++.+++++    +.  +++++++|+++++..++.++
T Consensus         3 ~~~i~~~~~~~~~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~~~~~~   73 (347)
T 1jg8_A            3 HMMIDLRSDTVTK-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----GK--EAALFVPSGTMGNQVSIMAH   73 (347)
T ss_dssp             --CEECSCGGGCC-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHH
T ss_pred             ceEEEeccccCCC-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh----CC--ceEEEecCcHHHHHHHHHHh
Confidence            5689999999877 578899998765432  235767777888999999987    43  46788888899999999999


Q ss_pred             ccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCCC-ccCC
Q 015890          110 CDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPS-GTYI  181 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~npt-G~~~  181 (398)
                      +++||+|+++.|+|....   ..++..|++++.+ .. + ++.+|++.+++.+++.    +++++|++++|+||| |.++
T Consensus        74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~  150 (347)
T 1jg8_A           74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG-K-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV  150 (347)
T ss_dssp             CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE-E-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC
T ss_pred             cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC-C-CCccCHHHHHHHhccccccccCceEEEEeccccccCCccC
Confidence            999999999999996533   2567789988877 32 2 3457999999999752    136999999999999 9999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCcccc--ccCCcEEEEcccccccCCCcceeE-EEEccCCcHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQ  254 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~~~  254 (398)
                      +.+++++|+++|+++|+++|+|++| +   .+.+.....  ...+  .++.|+||+++.+   +| +++.+   +++++.
T Consensus       151 ~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~---~~~~~~  222 (347)
T 1jg8_A          151 PLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGD---RDFIER  222 (347)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS--EEEEESSSTTCCS---SCEEEEEC---HHHHHH
T ss_pred             cHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc--EEEEecccccCCC---ceEEEEcC---HHHHHH
Confidence            9999999999999999999999987 3   222322211  1233  3445899999743   56 45566   778877


Q ss_pred             HHHhhccCCC--CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCCCh
Q 015890          255 LLKVQDNIPI--CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       255 l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  331 (398)
                      +.........  ..+...+.++..+++...+.+++    ..++++.+.+.|++++. .+ ..+..++++|+.++....+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  297 (347)
T 1jg8_A          223 ARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKE----DHENARFLALKLKEIGY-SVNPEDVKTNMVILRTDNLKVNA  297 (347)
T ss_dssp             HHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHH----HHHHHHHHHHHHHHHTC-BCCGGGCCSSEEEEECTTSSSCH
T ss_pred             HHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCc-eeccCCCcceEEEEEcccccCCH
Confidence            7655432222  23444455555555532222322    23455666676666533 33 23344778999987422367


Q ss_pred             HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+++++|. ++||.++++.    .+++|++++. .+++++++++++|++++++
T Consensus       298 ~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~  345 (347)
T 1jg8_A          298 HGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK  345 (347)
T ss_dssp             HHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence            78888885 7899999753    5789999865 7899999999999998765

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=1.3e-33  Score=266.28  Aligned_cols=332  Identities=16%  Similarity=0.130  Sum_probs=242.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.+.  ++++ .+|++.+++.+++.+..  .+ ......+..+.+++++.+.++  .+++++++|+++|++
T Consensus        36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~~a~~  110 (406)
T 4adb_A           36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFW--HT-GNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE  110 (406)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS--CC-CTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc--cc-cCCcCCHHHHHHHHHHHhhCC--CCeEEEeCcHHHHHH
Confidence            3678899999873  3333 58999999999886531  11 111123445666666666666  458999999999999


Q ss_pred             HHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890          104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus       104 ~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                      .++.+++.       +| |+|++++|+|+++...+...+.             ++..+ +.      .|+++|++.++++
T Consensus       111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~  183 (406)
T 4adb_A          111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA-AY------NDINSASALIDDS  183 (406)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE-CT------TCHHHHHTTCSTT
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe-CC------CcHHHHHHHhcCC
Confidence            99998865       66 9999999999998655554443             22222 11      3899999999855


Q ss_pred             CCCeEEEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCCc
Q 015890          163 PTPKLVSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~--~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G  236 (398)
                        +++|+++ |+||+|.++  +.+++++|.++|++||+++|+||+|  +.+.+......  .....++  |+||.++ +|
T Consensus       184 --~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G  257 (406)
T 4adb_A          184 --TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GG  257 (406)
T ss_dssp             --EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TT
T ss_pred             --eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CC
Confidence              4888888 999999987  9999999999999999999999999  65655433211  1111222  6799999 99


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC----CCccc
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG----EGAVK  312 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~  312 (398)
                      +|+||++++   +++++.+.......+++.+++.++++.++++....  ++..++++++++++.+.|++++    .....
T Consensus       258 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  332 (406)
T 4adb_A          258 FPVGALLAT---EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEV  332 (406)
T ss_dssp             SCCEEEEEC---HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             CCeEEEEEc---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            999999998   78888777665566788899999999988875221  4556666777777777666532    11111


Q ss_pred             cCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          313 GGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .+ .++++++.++... .+..+++..|+ ++||.+.++.    ++++|++++. .+++++++++++|.++++++.++
T Consensus       333 ~~-~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~  403 (406)
T 4adb_A          333 RG-LGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR  403 (406)
T ss_dssp             EE-ETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             EE-EEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            12 2677888886531 24678888776 7799999864    7899997666 78999999999999999987653

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.1e-33  Score=267.64  Aligned_cols=335  Identities=14%  Similarity=0.154  Sum_probs=235.4

Q ss_pred             HcCCCeEEcCCcc--CCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQA  101 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a  101 (398)
                      .+|+.++||+.|.  ++++.  ||++.+++.+++....  .|+...+..+.+..+++.+.+.++.+ +++|++++|++++
T Consensus        39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea  116 (419)
T 2eo5_A           39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEA  116 (419)
T ss_dssp             TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHH
T ss_pred             CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHH
Confidence            3677899998887  45543  7999999999986532  23222333455667777777777877 7899999999999


Q ss_pred             HHHHHHHhcc-CCCEEEEeCCCCcChhhHHH-hc--------C-----cEEEEeccCCCCCCC----------------C
Q 015890          102 FVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQ-MT--------G-----VTHILVGPCSSKTLH----------------P  150 (398)
Q Consensus       102 ~~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~-~~--------g-----~~~~~~~~~~~~~~~----------------~  150 (398)
                      ++.+++++.. +||+|++++|+|+++...+. ..        +     ..++.+ +.+.. +.                +
T Consensus       117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~-~~~~~g~~~~~~~~~~~~~  194 (419)
T 2eo5_A          117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHV-PYPNP-YRNPWHINGYENPSELVNR  194 (419)
T ss_dssp             HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEE-CCCCS-SSCTTCCCTTTCHHHHHHH
T ss_pred             HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEE-CCCcc-ccccccccccccchhhHHH
Confidence            9999987653 48999999999987554332 11        1     245566 54322 21                3


Q ss_pred             ChHHHH-HhhccC---CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890          151 DADWLE-KTLETK---PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       151 d~e~l~-~~l~~~---~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i  223 (398)
                      |+++|+ +.+++.   ..+++|+++..+||||. ..+.+++++|.++|++||+++|+||+|  +.+.+........+...
T Consensus       195 ~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~  274 (419)
T 2eo5_A          195 VIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVP  274 (419)
T ss_dssp             HHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred             HHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCC
Confidence            688999 888731   12355555444567896 678889999999999999999999999  65555322111111111


Q ss_pred             EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      .+.|+||.++ +| +|+||++++   ++++ .+ ......+++.++++++++.++|+.    +++..++++++++++.+.
T Consensus       275 d~~t~sK~~~-~G~~riG~~~~~---~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~----~~~~~~~~~~~~~~l~~~  344 (419)
T 2eo5_A          275 DVITLAKALG-GGIMPIGATIFR---KDLD-FK-PGMHSNTFGGNALACAIGSKVIDI----VKDLLPHVNEIGKIFAEE  344 (419)
T ss_dssp             SEEEECGGGG-TTTSCCEEEEEE---GGGC-CC-------CCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred             CEEEeccccc-CCccceEEEEEc---hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence            1337999998 69 999999998   5655 55 323334677899999999999974    223677888889999999


Q ss_pred             hccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          303 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       303 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      |+++  +....+. ++++++++........ ++..|+ ++||.++++.    .+++||+++. .+++++++++++|.+++
T Consensus       345 L~~~--~~~~~~~-g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l  415 (419)
T 2eo5_A          345 LQGL--ADDVRGI-GLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVI  415 (419)
T ss_dssp             HTTS--SSEEEEE-TTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHh--hhheEee-eEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            9876  2344454 6778888842111234 777776 8999999864    6799998775 68999999999999988


Q ss_pred             HHH
Q 015890          382 EEL  384 (398)
Q Consensus       382 ~~~  384 (398)
                      +++
T Consensus       416 ~~~  418 (419)
T 2eo5_A          416 KVV  418 (419)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            653

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=5.7e-34  Score=263.47  Aligned_cols=318  Identities=15%  Similarity=0.077  Sum_probs=235.4

Q ss_pred             CCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhccCCCEE
Q 015890           40 VYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      .+.++||.+++++.+.+..   +.|+ ......++++.+++++    +.+  ++++++++|+++++..++.++++  |+|
T Consensus         7 gp~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~v   77 (353)
T 2yrr_A            7 GPTPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPV   77 (353)
T ss_dssp             SSCCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCE
T ss_pred             CCCCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcE
Confidence            3566789999998877644   2221 1122344555555554    664  67899999999999999999876  899


Q ss_pred             EEeCCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890          117 VMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (398)
Q Consensus       117 l~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~  194 (398)
                      +++.++|+++  ...++..|.+++.+ +.+++ +.+|++.+++.+++. ++++|++++|+||||.+++   +++|.++|+
T Consensus        78 l~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~~---~~~i~~l~~  151 (353)
T 2yrr_A           78 LVLVNGAFSQRVAEMAALHGLDPEVL-DFPPG-EPVDPEAVARALKRR-RYRMVALVHGETSTGVLNP---AEAIGALAK  151 (353)
T ss_dssp             EEEECSHHHHHHHHHHHHTTCCEEEE-ECCTT-SCCCHHHHHHHHHHS-CCSEEEEESEETTTTEECC---HHHHHHHHH
T ss_pred             EEEcCCCchHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHHhC-CCCEEEEEccCCCcceecC---HHHHHHHHH
Confidence            9999999874  45567889999999 77654 468999999999862 2489999999999999999   889999999


Q ss_pred             HcCCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHH--------------h
Q 015890          195 AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK--------------V  258 (398)
Q Consensus       195 ~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~--------------~  258 (398)
                      ++|+++|+|++| ++....  .....+.++++.|++|++ +++|  +||++++   +++++.+..              .
T Consensus       152 ~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~  224 (353)
T 2yrr_A          152 EAGALFFLDAVTTLGMLPF--SMRAMGVDYAFTGSQKCLSAPPG--LAPIAAS---LEARKAFTGKRGWYLDLARVAEHW  224 (353)
T ss_dssp             HHTCEEEEECTTTTTTSCC--CHHHHTCSEEECCTTSTTCCCSS--CEEEEEC---HHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred             HcCCeEEEEcCcccccccc--cccccCceEEEecCcccccCCCc--eEEEEEC---HHHHHHhccCCCccccHHHHhhhh
Confidence            999999999999 443221  111123357888999966 4345  6999999   677765531              0


Q ss_pred             -hccCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCCCCCCChHHH
Q 015890          259 -QDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEV  334 (398)
Q Consensus       259 -~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  334 (398)
                       .....++.+...+.++.++++..... +++..++++++++++.+.|++.+ +.+..+.  .++++++.++.. .+..++
T Consensus       225 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~  302 (353)
T 2yrr_A          225 ERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARG-FRPYPKASPLPTVLVVRPPEG-VDADRL  302 (353)
T ss_dssp             TTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSSBCTTEEEEECCTT-CCHHHH
T ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CccccCccCCCeEEEEECCCC-CCHHHH
Confidence             12234566777777777777642233 67778888899999999998774 4555443  466677888643 357788


Q ss_pred             HHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHH-HHHHHHHHHHH
Q 015890          335 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK-AAADRLRRGLE  382 (398)
Q Consensus       335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~-~~~~~l~~~~~  382 (398)
                      .+.|. ++||.+.+|..|..++++|++++. .++++++ +++++|+++++
T Consensus       303 ~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~  351 (353)
T 2yrr_A          303 VRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA  351 (353)
T ss_dssp             HHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            88776 679999999877778899999954 6788888 99999988765

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=7.7e-33  Score=256.28  Aligned_cols=330  Identities=15%  Similarity=0.124  Sum_probs=234.9

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      .+++++|+.+.+ ..++|++++++.+.+.. ....|+    ..+.++.+++++.++++ .+.++++++|+++++..++.+
T Consensus         6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~----~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~   78 (356)
T 1v72_A            6 RPPALGFSSDNI-AGASPEVAQALVKHSSG-QAGPYG----TDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSA   78 (356)
T ss_dssp             CCCCCBCSCGGG-CCCCHHHHHHHHHTTSS-CCCSTT----CSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHT
T ss_pred             CCceEeeccCCc-cCCCHHHHHHHHhhccC-cccccc----cchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHH
Confidence            367899998754 45789999999987632 123343    33455556666666556 445699999999999999999


Q ss_pred             hccCCCEEEEeCCCCcChhhH--HHhc--CcEEEEeccCCCCCCCCChHHHHH-hhccC-----CCCeEEEEeCCCCCCc
Q 015890          109 LCDAGDSVVMFAPYYFNSYMS--FQMT--GVTHILVGPCSSKTLHPDADWLEK-TLETK-----PTPKLVSVVNPGNPSG  178 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~e~l~~-~l~~~-----~~~~~v~i~~p~nptG  178 (398)
                      ++++||+|+++.|+|++....  +...  |.+++.+ +.+  .+.+|+++|++ .+++.     .++++|++++|+| ||
T Consensus        79 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG  154 (356)
T 1v72_A           79 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV-DGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VG  154 (356)
T ss_dssp             SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC-CCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TS
T ss_pred             hcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEe-cCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CC
Confidence            999999999999999776655  6666  9999988 664  25789999999 88752     1368999999886 99


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeece--ec--cCCCccccc--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          179 TYIPERLLKRISDLCKAAGSWLVVDNTY--FM--YDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~livDe~~--~~--~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      .+++.+++++|+++|++||+++|+|++|  +.  +.+......  ..+..+++.|+||+ +. ....||++++   ++++
T Consensus       155 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~~---~~~~  229 (356)
T 1v72_A          155 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV-LAAEAIVLFN---TSLA  229 (356)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC-SSCEEEEESS---GGGH
T ss_pred             ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC-cCccEEEEEC---HHHH
Confidence            9999999999999999999999999999  21  223222221  11223456699998 42 2333488887   6777


Q ss_pred             HHHHHhhccCCC-Cc-chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC
Q 015890          253 TQLLKVQDNIPI-CA-SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD  330 (398)
Q Consensus       253 ~~l~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (398)
                      +.+......... .. +...+.++...++.  +...+..+++.++++++.+.|++++++.+..+.+++++|+.++     
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----  302 (356)
T 1v72_A          230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTD--DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----  302 (356)
T ss_dssp             HHHHHHHHHTTCCCSSTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----
T ss_pred             hhHHHHhhccCchhhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----
Confidence            766544321111 11 22333333444543  3345566777888899999998875556656666888998875     


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       .+++++|. ++||.+.+|. |+ ++++|++++. .+++++++++++|++++++..
T Consensus       303 -~~~~~~l~-~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~  354 (356)
T 1v72_A          303 -SAMIDALL-KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ  354 (356)
T ss_dssp             -HHHHHHHH-HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred             -HHHHHHHH-hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence             26777774 7899999887 54 7899999876 689999999999998876643

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=100.00  E-value=1.3e-32  Score=256.22  Aligned_cols=336  Identities=11%  Similarity=0.005  Sum_probs=235.4

Q ss_pred             HHHHHHHHH-HcCC-CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE
Q 015890           18 IMVQIQELV-RGAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV   94 (398)
Q Consensus        18 ~~~~~~~~~-~~g~-~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~   94 (398)
                      .++.+++.. +.|. +++|++.+.++.++++++++++.    .     |.   +...+++.+++.+++.+|.+ ++++++
T Consensus        14 ~~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~----~-----~~---~~~~~~~~~~~~~a~~~g~~~~~~~~~   81 (374)
T 2aeu_A           14 ARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN----T-----YI---GSSYFAEKVNEYGLKHLGGDENDKCVG   81 (374)
T ss_dssp             HHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT----S-----TT---HHHHHHHHHHHHHHHHHTCCTTEEEEE
T ss_pred             HHHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH----H-----hc---CchHHHHHHHHHHHHHhCCCCcceEEE
Confidence            344455554 5676 88999998888889999999985    1     21   11445667777776667763 478999


Q ss_pred             ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeE-EEE
Q 015890           95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSV  170 (398)
Q Consensus        95 ~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~-v~i  170 (398)
                      ++|+++++..++.++  +||+|+++.|+|+++..   .++..|++++.+         .|++++++. +++  +++ |++
T Consensus        82 ~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~--~~~~v~~  147 (374)
T 2aeu_A           82 FNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDK--DTLVIIT  147 (374)
T ss_dssp             ESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCT--TEEEEEE
T ss_pred             EcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCC--ccEEEEE
Confidence            999999999999988  89999999999877554   667889888765         278899888 544  599 999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccC--CCccccccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      ++|+||||.  +..++++|.++|+++|+++|+||+| ..+.  .........+.+++++|+||.++  |+|+||++++  
T Consensus       148 ~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~--g~~~G~~~~~--  221 (374)
T 2aeu_A          148 GSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLME--GPRGGLLAGK--  221 (374)
T ss_dssp             CBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSS--SCSCEEEEEE--
T ss_pred             ccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCccccc--CcceEEEEEC--
Confidence            999999996  6677999999999999999999999 3221  11110111234588899999874  7899999998  


Q ss_pred             cHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHH----HHHHHHHhccC---CCCccc-cCCccE
Q 015890          248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRN----REIIREALSPL---GEGAVK-GGEGAI  318 (398)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~-~~~~~~  318 (398)
                       +++++.+......+..+++++.+.++..+++.... .+++..+..+..    ++.+.+.|..+   .++.+. .+.+.+
T Consensus       222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~  300 (374)
T 2aeu_A          222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV  300 (374)
T ss_dssp             -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred             -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence             78888887766555556788888888888876322 233333333333    45666666654   122333 344344


Q ss_pred             EEEeeCCCCC--CChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEEecCCC--HHHHHHHHHHHHHHHHHHhc
Q 015890          319 YLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGGLV--EDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       319 ~~~~~~~~~~--~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~~~--~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +.|...+...  .+..+++.++++++||.+.||..|. .++++||+++..+  +.+++++.+.|.++++++.+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~  373 (374)
T 2aeu_A          301 IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK  373 (374)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred             EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            4454443110  0112366677778999999998763 4679999998622  22477888888888777653

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=1.3e-33  Score=263.37  Aligned_cols=318  Identities=15%  Similarity=0.135  Sum_probs=237.4

Q ss_pred             cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      +|+.++||+.|.+  +++ ++|.+.+++.+.+.+.  ....| +..+..++++.+++++    |+ ++++++++|+++++
T Consensus        26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~-~~~v~~~~g~t~a~   99 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT-EGKVFFANSGTESV   99 (375)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS-CEEEEEESSHHHHH
T ss_pred             CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC-CCeEEEeCchHHHH
Confidence            5678999998873  666 7899999999887532  12346 4445566776666664    66 48899999999999


Q ss_pred             HHHHHH---hc---cCC-CEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCCCCCCCChHHHHHhhccC
Q 015890          103 VNIVLT---LC---DAG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus       103 ~~~~~~---l~---~~g-d~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                      ..++.+   +.   ++| |+|++++|+|+++...+...+..             +..+ +.      .|+++|++.++++
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~  172 (375)
T 2eh6_A          100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYA-KL------NDIDSVYKLLDEE  172 (375)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEE-CT------TCHHHHHTTCCTT
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeC-CC------chHHHHHHHhcCC
Confidence            999975   34   678 99999999999877655444322             2222 11      4899999999864


Q ss_pred             CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCC--cEEEEcccccccCCCcc
Q 015890          163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~--~~i~~~s~sK~~~~~G~  237 (398)
                        +++|++++++||||.+ .+.+++++|.++|+++|+++|+||+|  +.+.+........+  ..++  |+||.++ +|+
T Consensus       173 --~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~-~g~  247 (375)
T 2eh6_A          173 --TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLG-GGV  247 (375)
T ss_dssp             --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-TTS
T ss_pred             --eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEccccc-CCC
Confidence              5999999999999998 56888999999999999999999999  54444222111111  1233  7789998 799


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      |+||++++   +++++.+.......+++.+.+.+.++.++|+.    ..+..++++++++++.+.|++++. ....+ .+
T Consensus       248 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~g  318 (375)
T 2eh6_A          248 PIGAILAR---EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VEKLLPHVREVGNYFKEKLKELGK-GKVKG-RG  318 (375)
T ss_dssp             CCEEEEEE---HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTS-SEEEE-ET
T ss_pred             CeEEEEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-CCceE-EE
Confidence            99999998   67776665432344566788888888777764    226677788888899988887765 33333 37


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +++|+.++.   +..++++.|. ++||.+.++    .++++|++++. .+++++++++++|+++
T Consensus       319 ~~~~~~~~~---~~~~~~~~l~-~~gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          319 LMLGLELER---ECKDYVLKAL-EKGLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             TEEEEECSS---CCHHHHHHHH-HTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcC---cHHHHHHHHH-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            888888864   3567888776 799999986    36899999875 7899999999999875

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=1.4e-33  Score=268.86  Aligned_cols=348  Identities=16%  Similarity=0.120  Sum_probs=243.5

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~  102 (398)
                      .+|+.++||+.|.+  +++ .+|++.+++.+++.+.  ..|....+..+.++.+++++.+.++... +++++++|+++++
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~  117 (439)
T 3dxv_A           40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN  117 (439)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence            35788999998876  344 7899999999998763  3455566778889999999988886655 7999999999999


Q ss_pred             HHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEE---------------EEeccCCCCCCCC----ChHHHHHhhc-
Q 015890          103 VNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTH---------------ILVGPCSSKTLHP----DADWLEKTLE-  160 (398)
Q Consensus       103 ~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~----d~e~l~~~l~-  160 (398)
                      ..+++++  ..++++|++.+++|++....+...+...               ..+ +.+......    |+++|++.++ 
T Consensus       118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~~  196 (439)
T 3dxv_A          118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPD-PYRPYRNDPTGDAILTLLTEKLAA  196 (439)
T ss_dssp             HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCC-SSSCBTTBTTSHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHh
Confidence            9999986  3456899999999988776554443221               112 222111111    6899999993 


Q ss_pred             c-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          161 T-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       161 ~-~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      . ...+++|++++++|++|.+. +++++++|.++|++||+++|+||+|  +.+.+........+....+.|+||.++ +|
T Consensus       197 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~-~G  275 (439)
T 3dxv_A          197 VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLG-GG  275 (439)
T ss_dssp             SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGG-TT
T ss_pred             cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhc-CC
Confidence            1 12257888888888888865 5556999999999999999999999  555553222221111122338999998 69


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +|+||++++   +++++.+.......++ .++++++++.++++..  ++..++..+.....++.+.+.+..++.+....+
T Consensus       276 ~riG~~~~~---~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  351 (439)
T 3dxv_A          276 LPLSAVIAP---AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRG  351 (439)
T ss_dssp             SCCEEEEEE---HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred             cceEEEEEC---HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence            999999998   7888777655445566 8888998888888742  223333333334444455554444555444445


Q ss_pred             CccEEEEeeCCC-------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          315 EGAIYLWARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       315 ~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      . ++++++.+..       ...+..++...++ ++||.+.++..  .++++||+++. .+++++++++++|.++++++.+
T Consensus       352 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  427 (439)
T 3dxv_A          352 R-GLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSELSA  427 (439)
T ss_dssp             E-TTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGGG
T ss_pred             E-EEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            5 6677776621       1112456777776 77999999753  25899999776 6899999999999999988754

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=4.9e-34  Score=272.45  Aligned_cols=346  Identities=10%  Similarity=0.022  Sum_probs=240.5

Q ss_pred             cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHH
Q 015890           28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV  103 (398)
Q Consensus        28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~  103 (398)
                      +|+.++||..|  .++++ .||++.+++.+++.+.  ..|....+..+.+..+++++.+.++.+ .++|++++|+++|++
T Consensus        62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  139 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE  139 (453)
T ss_dssp             TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence            57889999987  45565 4899999999988763  335444556777888888888877654 578999999999999


Q ss_pred             HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC---CCCCCC--------hHHHH
Q 015890          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS---KTLHPD--------ADWLE  156 (398)
Q Consensus       104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~---~~~~~d--------~e~l~  156 (398)
                      .+++.+..  .+++|++++++|+++...+...+.              .+..+ +.+.   +.+..+        ++.|+
T Consensus       140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l~  218 (453)
T 4ffc_A          140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRM-PASYPLRDEPGLTGEEAARRAISRIE  218 (453)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCTTTSCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccCccccchHHHHHHHHHHHH
Confidence            99987753  458999999999987765544321              23334 3321   111112        45666


Q ss_pred             HhhccCCCCeEEEEeCCCCCCc-c-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890          157 KTLETKPTPKLVSVVNPGNPSG-T-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       157 ~~l~~~~~~~~v~i~~p~nptG-~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~  232 (398)
                      +.+..++  .++++..|.|++| . ..+++++++|.++|++||+++|+||+|  +.+.+........+....+.++||.+
T Consensus       219 ~~i~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~  296 (453)
T 4ffc_A          219 TQIGAQS--LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGI  296 (453)
T ss_dssp             HHTCGGG--EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG
T ss_pred             HhcCCCC--EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhh
Confidence            6665443  4444455666555 3 457888999999999999999999999  65555322222112223345789999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      + +|+|+||++++   +++++.+.......+++.|+++++++.++|+..  ++..++..+.....++.+.+.+++++.+.
T Consensus       297 ~-~G~~~G~~~~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  372 (453)
T 4ffc_A          297 A-GGMPLSAVTGR---AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG  372 (453)
T ss_dssp             G-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred             c-CCcCeEEEEEC---HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence            8 58999999998   788887776666678888999999999988742  23344444444445556666655666544


Q ss_pred             cccCCccEEEEeeCCCC------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEK------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ...+. ++++++.+...      .....++...++ ++||.+.|+..+  .+++||+++. .+++++++++++|.+++++
T Consensus       373 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  448 (453)
T 4ffc_A          373 EVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRA  448 (453)
T ss_dssp             EEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            44454 66777776321      012455666665 889999987543  4789999876 6899999999999999988


Q ss_pred             Hhc
Q 015890          384 LVK  386 (398)
Q Consensus       384 ~~~  386 (398)
                      +.+
T Consensus       449 ~~~  451 (453)
T 4ffc_A          449 KAS  451 (453)
T ss_dssp             HC-
T ss_pred             HHh
Confidence            653

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=6.7e-34  Score=267.51  Aligned_cols=327  Identities=12%  Similarity=0.107  Sum_probs=237.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.+.  ++++ .+|++.+++.+++.....  +. .....+.++.+++.+.+.++  .+++++++|+++|+.
T Consensus        37 ~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~  111 (397)
T 2ord_A           37 EKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH--CS-NLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANE  111 (397)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CC-TTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHH
T ss_pred             CCCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc--Cc-cccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHH
Confidence            3577899998773  4443 589999999998865321  11 11124566666666666666  578999999999999


Q ss_pred             HHHHHhcc------C-CCEEEEeCCCCcChhh-HHHhcCcE------------EEEeccCCCCCCCCChHHHHHhhccCC
Q 015890          104 NIVLTLCD------A-GDSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus       104 ~~~~~l~~------~-gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      .++.++..      + +++|++++|+|++... .++..|.+            ++.+ +.      .|+++|++.++++ 
T Consensus       112 ~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~l~~~l~~~-  183 (397)
T 2ord_A          112 AAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYF-EF------NNVEDLRRKMSED-  183 (397)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEE-CT------TCHHHHHHHCCTT-
T ss_pred             HHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEe-cC------CCHHHHHHHhhcC-
Confidence            99998863      5 4789999999977554 66667765            5555 43      2899999999864 


Q ss_pred             CCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEEEEcccccccCCCcce
Q 015890          164 TPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r  238 (398)
                       +++|++++|+||||. +++.+++++|+++|+++|+++|+||+|  +.+.+......  .....++  |+||.++ +|+|
T Consensus       184 -~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~r  259 (397)
T 2ord_A          184 -VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG-GGVP  259 (397)
T ss_dssp             -EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSC
T ss_pred             -eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC-CCcC
Confidence             599999999999999 999999999999999999999999999  55544322211  1111133  7799998 8999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCccccC
Q 015890          239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGG  314 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~  314 (398)
                      +||+++++   +++ .+.......+++.+.+.++++.++|+....  ++..++++++++++.+.|+++    +......+
T Consensus       260 ~G~~~~~~---~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  333 (397)
T 2ord_A          260 IGAVIVNE---RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG  333 (397)
T ss_dssp             CEEEEECS---TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred             eEEEEEch---Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE
Confidence            99999984   444 443323345667788999988888875222  345566677777777777654    22111233


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      . ++++++.++.. .+..++++.|+ ++||.+.++.    ++++|++++. .+++++++++++|.+++++
T Consensus       334 ~-g~~~~~~~~~~-~~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          334 M-GLMIGIQFREE-VSNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             E-TTEEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             E-eEEEEEEECCh-HHHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence            3 67788888653 25778888876 6899999873    6799999765 6899999999999988754

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=8.6e-33  Score=260.92  Aligned_cols=327  Identities=13%  Similarity=0.120  Sum_probs=241.0

Q ss_pred             cCCCeEEcCCccC-CCCCcHHHHHHHHHhhcCCC--CCCC----CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKY----GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~~-~~~~~~~v~~a~~~~~~~~~--~~~y----~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+.++||+.++. +++.+|.+.+++.+++.+..  ...|    +......++++.+++++    +.+  ..++++++++
T Consensus        57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~  130 (409)
T 3kki_A           57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----GFD--ECLLSQSGWN  130 (409)
T ss_dssp             CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred             CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----CCC--eEEEecchHH
Confidence            3678999988752 34578999999999886521  1122    22344566777777766    443  3455566679


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      ++..++.+++++||.|+++.|+|..+...++..|.+++.+ +.      .|+++|++.+++.+ +++|++++|+||||.+
T Consensus       131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~-~~~vi~~~~~nptG~~  202 (409)
T 3kki_A          131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPF-MH------NNCDHLRMLIQRHG-PGIIVVDSIYSTLGTI  202 (409)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEE-CT------TCHHHHHHHHHHHC-SCEEEEESBCTTTCCB
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCCc
Confidence            9999999999999999999999999999999999999887 43      48999999998543 4999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-e---ccCCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-F---MYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~---~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      .+   +++|.++|+++|+++|+||+| .   +..+.....   ...+.++++.|+||.++.+|   ||++++   +++++
T Consensus       203 ~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~---~~~~~  273 (409)
T 3kki_A          203 AP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCN---NEVNR  273 (409)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEES---SSGGG
T ss_pred             CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEEC---HHHHH
Confidence            99   999999999999999999999 2   222222111   11234588899999998554   999988   45555


Q ss_pred             HHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          254 QLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       254 ~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      .+.....  ....+.+...++++.++++.. +..++.++.++++++++.+.|++++. .+. + .++++++.++.. .+.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~aa~~aal~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~-~~~~~~~~~~~~-~~~  348 (409)
T 3kki_A          274 CVPFISYPAIFSSTLLPYEAAGLETTLEII-ESADNRRQHLDRMARKLRIGLSQLGL-TIR-S-ESQIIGLETGDE-RNT  348 (409)
T ss_dssp             THHHHCHHHHHSBCCCHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-C-SSSEEEEEEESH-HHH
T ss_pred             HHHHhCcCccccCCCcHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-C-CCCEEEEEeCCH-HHH
Confidence            5543221  123345666777777777642 22256777888899999999998865 444 3 477788887642 135


Q ss_pred             HHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .++.++|+ ++||.+.++..+.   ..+++||+++. .+++++++++++|+++++.
T Consensus       349 ~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          349 EKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             HHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence            56778776 6799998866442   35789999986 7899999999999998875

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=8.7e-33  Score=262.52  Aligned_cols=341  Identities=12%  Similarity=0.083  Sum_probs=234.4

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.+.  ++++ .+|++.+++.+++.+...  ++......+....+++.+.+.++.++++|++++|++++++
T Consensus        40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~  117 (429)
T 1s0a_A           40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH--VMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVE  117 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC--CCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc--ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence            3577899998876  3454 589999999998865321  1111111234455555555556777899999999999999


Q ss_pred             HHHHHhc---c----CCCEEEEeCCCCcChhhHHHhc-C-------------cEEEEeccCCC----CCC-CCChHHHHH
Q 015890          104 NIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMT-G-------------VTHILVGPCSS----KTL-HPDADWLEK  157 (398)
Q Consensus       104 ~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~----~~~-~~d~e~l~~  157 (398)
                      .+++++.   +    +|++|+++.|+|+++...+... |             ..+..+ +.+.    ..+ .+|+++|++
T Consensus       118 ~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~  196 (429)
T 1s0a_A          118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFAR  196 (429)
T ss_dssp             HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHH
T ss_pred             HHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEe-CCCcccccccchHHHHHHHHH
Confidence            9998754   2    5899999999998865433221 1             123334 3331    122 478999999


Q ss_pred             hhccC-CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890          158 TLETK-PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       158 ~l~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~  232 (398)
                      .++.. ..+++|+++.. +||||. ..+.+++++|.++|++||+++|+||+|  +++.+........+....+.|+||.+
T Consensus       197 ~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l  276 (429)
T 1s0a_A          197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL  276 (429)
T ss_dssp             HHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGG
T ss_pred             HHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccc
Confidence            98731 22466666555 799996 567888999999999999999999999  55544322111111111133788999


Q ss_pred             CCCc-ceeEEEEccCCcHHHHHHHHHhh-----ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          233 GMMG-WRVGYIAYPSEVEGFATQLLKVQ-----DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       233 ~~~G-~r~G~i~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      + +| +|+||++++   +++++.+....     ...+++.|+++++++.++++...+  ++..++++++++++.+.|+++
T Consensus       277 ~-~G~~~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l  350 (429)
T 1s0a_A          277 T-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAPA  350 (429)
T ss_dssp             G-TSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGGG
T ss_pred             c-CCCccceEEEeC---HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHH
Confidence            8 68 999999998   78888876531     234667789999998888874111  234456667777888777764


Q ss_pred             ---CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          307 ---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       307 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                         +.+....+. +++++++++.. .+..++...|+ ++||.+.+.     .+++||+++. .+++++++++++|+++++
T Consensus       351 ~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~~  422 (429)
T 1s0a_A          351 RDAEMVADVRVL-GAIGVVETTHP-VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQ  422 (429)
T ss_dssp             GGCTTEEEEEEE-TTEEEEEESSC-BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTS
T ss_pred             hcCCCEEEEEEe-eEEEEEEECCc-ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence               332333344 66888888643 35677888776 789999883     3789999775 789999999999998875


Q ss_pred             HH
Q 015890          383 EL  384 (398)
Q Consensus       383 ~~  384 (398)
                      ++
T Consensus       423 ~~  424 (429)
T 1s0a_A          423 DE  424 (429)
T ss_dssp             SG
T ss_pred             hh
Confidence            53

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=2.6e-33  Score=266.47  Aligned_cols=346  Identities=13%  Similarity=0.110  Sum_probs=236.5

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..+.+  +++ .+|++.+++.+++.+.. + + ...+..+.+..+++.+.+.++.++++|++++|+++|++
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~  116 (433)
T 1zod_A           40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD-H-L-FSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE  116 (433)
T ss_dssp             TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCC-C-C-CTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHH
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCc-c-c-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            35778999987654  344 48999999999886531 1 1 12223456667777777777877889999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc--------------CcEEEEeccCCC-CCC--------CCChHHHHHh
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT--------------GVTHILVGPCSS-KTL--------HPDADWLEKT  158 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~--------------g~~~~~~~~~~~-~~~--------~~d~e~l~~~  158 (398)
                      .+++.+.  ..+++|++++|+|+++...+...              |+..+.+ +... ..+        .+|++.|++.
T Consensus       117 ~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~le~~  195 (433)
T 1zod_A          117 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPA-PFTYRPRFERNGAYDYLAELDYAFDL  195 (433)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECC-CCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecC-CcccccccCCchhhhHHHHHHHHHHH
Confidence            9998754  34579999999998866543321              3333333 2110 111        1368999999


Q ss_pred             hccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccC
Q 015890          159 LETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYG  233 (398)
Q Consensus       159 l~~~--~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~  233 (398)
                      ++..  ..+++|+++..+||||. .++++++++|.++|++||+++|+||+|  +.+.+........+....+.|+||.++
T Consensus       196 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~  275 (433)
T 1zod_A          196 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG  275 (433)
T ss_dssp             HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred             HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc
Confidence            8731  22466666544688996 578899999999999999999999999  555443222111111122348999998


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHhhcc--CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CC
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG  307 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~  307 (398)
                       +|+|+||++++   +++++.+......  .+++.++++++++.++++...+  ++..++++++++++.+.|++    .+
T Consensus       276 -~G~~ig~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~  349 (433)
T 1zod_A          276 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFD  349 (433)
T ss_dssp             -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             -CCCCeeEEEEh---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence             59999999999   7888888663222  5677789999988888864111  12334455555555555543    34


Q ss_pred             CCccccCCccEEEEeeCCCCC-------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      .+....+. ++++++.++...       ....++...++ ++||.+.++..|+.++++||+++. .+++++++++++|.+
T Consensus       350 ~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~  427 (433)
T 1zod_A          350 CIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ  427 (433)
T ss_dssp             TEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence            33334444 677788775311       12566777776 789999998866556899998775 789999999999999


Q ss_pred             HHHHH
Q 015890          380 GLEEL  384 (398)
Q Consensus       380 ~~~~~  384 (398)
                      +++++
T Consensus       428 ~l~~~  432 (433)
T 1zod_A          428 AIERA  432 (433)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88764

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=5.4e-33  Score=262.93  Aligned_cols=329  Identities=16%  Similarity=0.135  Sum_probs=237.7

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||+.|.  ++++ .+|++.+++.+++.+..  .+ ......+.++.+++.+.+.++  .+++++++|+++|++.
T Consensus        55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~--~~-~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~  129 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLW--HT-SNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANET  129 (420)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC--CC-CTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHH
T ss_pred             CCCEEEEccccccccccCCCCHHHHHHHHHHHHhcc--cc-cCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHH
Confidence            578899998874  4443 58999999999986632  12 112234566777777776666  5789999999999999


Q ss_pred             HHHHhcc-------CC-CEEEEeCCCCcChhhH-HHhcCcE------------EEEeccCCCCCCCCChHHHHHhhccCC
Q 015890          105 IVLTLCD-------AG-DSVVMFAPYYFNSYMS-FQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus       105 ~~~~l~~-------~g-d~Vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      +++++..       +| ++|++++|+|++.... +...|.+            +..+ +.      .|+++|++.++++ 
T Consensus       130 al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~le~~i~~~-  201 (420)
T 2pb2_A          130 AFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV-PF------NDLHAVKAVMDDH-  201 (420)
T ss_dssp             HHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEE-CT------TCHHHHHHHCCTT-
T ss_pred             HHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEe-cC------CCHHHHHHHhccC-
Confidence            9998875       67 5999999999886543 3444432            3444 32      2899999999864 


Q ss_pred             CCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--cc-CCcEEEEcccccccCCCcc
Q 015890          164 TPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VE-GDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~-~~~~i~~~s~sK~~~~~G~  237 (398)
                       +++|++++++|++|. .++.+++++|.++|+++|+++|+||+|  +.+.+.....  .. ..+ ++  |+||.++ +|+
T Consensus       202 -~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~d-ii--t~sK~l~-~G~  276 (420)
T 2pb2_A          202 -TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPD-IL--TSAKALG-GGF  276 (420)
T ss_dssp             -EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCS-EE--EECGGGG-TTS
T ss_pred             -ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCC-eE--Eeccccc-CCC
Confidence             589999888888885 589999999999999999999999999  5555543211  11 122 33  7899998 899


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG  313 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~  313 (398)
                      |+||++++   +++++.+.......+++.+++.++++.++|+...+  ++..++++++++++.+.|+++    +.+....
T Consensus       277 ~iG~~~~~---~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  351 (420)
T 2pb2_A          277 PVSAMLTT---QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR  351 (420)
T ss_dssp             CCEEEEEC---HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             ceEEEEEh---HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            99999998   67766654433345677889999998888875222  345566666777777666553    3322333


Q ss_pred             CCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          314 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +. ++++++.++... .+..++.+.|+ ++||.+.++.    ++++|++++. .+++++++++++|.++++++.
T Consensus       352 ~~-g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~  419 (420)
T 2pb2_A          352 GM-GLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV  419 (420)
T ss_dssp             EE-TTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ec-ceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            44 677788876421 14677888776 6999999863    6799999765 789999999999999987753

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-32  Score=263.37  Aligned_cols=345  Identities=13%  Similarity=0.070  Sum_probs=242.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ++++ .||++.+++.+++.+..   +....+..+.+..+++++.+.++.+.+ |++++|+++|++
T Consensus        46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~  121 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS---YFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANE  121 (452)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC---CCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcC---CcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHH
Confidence            3578899999873  4554 57999999999987632   123445567788888888877776656 999999999999


Q ss_pred             HHHHHhc-----c---CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCC-CCC-CC---------
Q 015890          104 NIVLTLC-----D---AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TLH-PD---------  151 (398)
Q Consensus       104 ~~~~~l~-----~---~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~~-~d---------  151 (398)
                      .+++.++     .   ++++|++.+|+|+++.......+.             ....+ +.+.. .+. -|         
T Consensus       122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  200 (452)
T 3n5m_A          122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHV-TPPDCYRMPGIERENIYDVEC  200 (452)
T ss_dssp             HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEE-CCCCTTTSTTTTTSCGGGCHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEe-CCCccccCccCCchhhHHHHH
Confidence            9999987     4   679999999999987755544432             12333 22110 000 02         


Q ss_pred             hHHHHHhhc-c-CCCCeEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          152 ADWLEKTLE-T-KPTPKLVSVVNP-GNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       152 ~e~l~~~l~-~-~~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      +++|++.++ . ...+++|+++++ +| ||.+. +++++++|.++|++||+++|+||+|  +++.|........+....+
T Consensus       201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di  279 (452)
T 3n5m_A          201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDI  279 (452)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCE
Confidence            889999987 1 122577888877 89 99765 8888999999999999999999999  6665543322222222234


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR  296 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~  296 (398)
                      .++||.++ +| +|+||++++   +++++.+..      .....+++.++++++++.++|+..  ++..++..+.....+
T Consensus       280 ~t~sK~l~-~G~~~ig~~~~~---~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~  355 (452)
T 3n5m_A          280 ITMAKGIT-SAYLPLSATAVK---REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLL  355 (452)
T ss_dssp             EEECGGGG-TTSSCCEEEEEE---HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             Eeeccccc-CCCcceEEEEEC---HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            47899998 59 999999998   788877732      123456788999999999988742  233444444555556


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCCCCCC--------hHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecC-C
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-L  365 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~-~  365 (398)
                      +.+.+.+++++.+....+. +.++++.+.....+        ..++...++ ++||.+.|+..|.  .+++|||+++. .
T Consensus       356 ~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~  433 (452)
T 3n5m_A          356 EQLKEEIGEHPLVGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVI  433 (452)
T ss_dssp             HHHHHHHTTCTTEEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTC
T ss_pred             HHHHHHHhcCCCeEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCC
Confidence            6666666666654555555 55666665321111        235666665 8899999987653  36799998776 7


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 015890          366 VEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~  383 (398)
                      +++++++++++|.+++++
T Consensus       434 t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          434 SSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             CHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999988753

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-32  Score=257.01  Aligned_cols=328  Identities=12%  Similarity=0.059  Sum_probs=237.7

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-c-EEEecChHHHHHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFVNIVLT  108 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~-v~~~~g~t~a~~~~~~~  108 (398)
                      ...+|+-|  +.++||++++++.+.+..    .+  .....++.+.+.+++++.++.+.+ + +++++|++++++.++.+
T Consensus        19 ~~~~~~pg--p~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~   90 (376)
T 3f0h_A           19 GMLNFTVG--PVMSSEEVRAIGAEQVPY----FR--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMN   90 (376)
T ss_dssp             SCEECSSS--SCCCCHHHHHHHTSCCCC----CS--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHH
T ss_pred             CceeecCC--CCCCcHHHHHHhcCCCCC----CC--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHh
Confidence            44455544  566799999999776532    12  223356777777777777787642 4 55589999999999999


Q ss_pred             hccCCCEEEEeCCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      ++++||+|+++.|+|++..  ..++..|.+++.+ +.+. ++.+|++.+++.+++++  ++|++++|+||||.++|   +
T Consensus        91 ~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~--~~v~~~~~~nptG~~~~---l  163 (376)
T 3f0h_A           91 CFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVAL-KLEH-GKKLTKEKLYEYDNQNF--TGLLVNVDETSTAVLYD---T  163 (376)
T ss_dssp             HCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEE-ECCT-TCCCCHHHHHTTTTSCC--CEEEEESEETTTTEECC---H
T ss_pred             ccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEE-eCCC-CCCCCHHHHHHhhccCc--eEEEEecccCCcceecC---H
Confidence            9999999999999887644  4567789998888 7764 35789999999887654  99999999999999999   9


Q ss_pred             HHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015890          187 KRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD----  260 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~----  260 (398)
                      ++|.++|+++|+++|+|+++ +....  ......+.++++.|+||+++ ++|  +|+++.+   +++++.+.....    
T Consensus       164 ~~i~~l~~~~~~~li~D~~~~~~~~~--~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~  236 (376)
T 3f0h_A          164 MMIGEFCKKNNMFFVCDCVSAFLADP--FNMNECGADVMITGSQKVLACPPG--ISVIVLA---PRGVERVEKSKVRTMY  236 (376)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSC--CCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC---HHHHHHHHTCCCCCST
T ss_pred             HHHHHHHHHcCCEEEEEcCccccCcc--ccccccCccEEEecCcccccCCCc--eEEEEEC---HHHHHHhhcCCCCcee
Confidence            99999999999999999998 33211  11112234588899999997 455  6888888   788877764211    


Q ss_pred             -------------cCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCccccCCc-cEEEEeeC
Q 015890          261 -------------NIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKGGEG-AIYLWARL  324 (398)
Q Consensus       261 -------------~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~  324 (398)
                                   ...++.+...+.++.++++... . .+++..+...++++++.+.|++++. .+..+.. ...+.+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~  315 (376)
T 3f0h_A          237 FDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPF-ELVSESPANGVTSVHP  315 (376)
T ss_dssp             TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSE-EECCSSBBTTEEEEEE
T ss_pred             ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-ccCccccCceEEEEeC
Confidence                         1234555555455555555312 2 4678888889999999999998764 4443321 22222222


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +  ..+..++...|.+++||.+++|.....++++|++++. .+++++++++++|++++++
T Consensus       316 ~--~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          316 T--TANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             S--SSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             C--CCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            2  2367788888875459999998654567899999976 7899999999999988753

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=100.00  E-value=1.5e-32  Score=262.16  Aligned_cols=343  Identities=13%  Similarity=0.092  Sum_probs=235.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  +.++ .+|++.+++.+++.+.  ..|....+..+.+.++++++.+.++...++|++++|+++|++
T Consensus        41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~  118 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAME  118 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence            3578899999873  3443 4899999999998763  233344566778888999988887766789999999999999


Q ss_pred             HHHHHhcc----CC----CEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCC-----------CC
Q 015890          104 NIVLTLCD----AG----DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLH-----------PD  151 (398)
Q Consensus       104 ~~~~~l~~----~g----d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~-----------~d  151 (398)
                      .+++.++.    +|    |+|+++.|+|+++...+...+.             .+..+ +.+ +.+.           .|
T Consensus       119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d  196 (448)
T 3dod_A          119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKA-PIP-YVYRSESGDPDECRDQC  196 (448)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEE-CCC-CCTTSSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEe-CCC-ccccCCccchhhhhHHH
Confidence            99999875    44    9999999999887654433322             12222 222 1111           14


Q ss_pred             hHHHHHhhc--cCCCCeEEEEeCCC-CCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          152 ADWLEKTLE--TKPTPKLVSVVNPG-NPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       152 ~e~l~~~l~--~~~~~~~v~i~~p~-nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      +++|++.++  ..+ +++|+++.++ |++|. +++++++++|.++|++||+++|+||+|  +++.|........+....+
T Consensus       197 ~~~le~~l~~~~~~-~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di  275 (448)
T 3dod_A          197 LRELAQLLEEHHEE-IAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDL  275 (448)
T ss_dssp             HHHHHHHHHHHGGG-EEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred             HHHHHHHHHhCCCC-EEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCE
Confidence            788999887  222 5777777766 88885 568888999999999999999999999  6655543322222222224


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN  295 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~  295 (398)
                      .++||.++ +| +|+||++++   +++++.+..       .....+++.++++++++.++|+..  ++..++..+.....
T Consensus       276 ~t~sK~l~-~G~~~ig~v~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~  351 (448)
T 3dod_A          276 MAAGKGIT-GGYLPIAVTFAT---EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKL  351 (448)
T ss_dssp             EEECGGGG-TTSSCCEEEEEE---HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             EEeccccc-CCcCceEEEEEC---HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            47889997 68 599999999   788887765       444567788999999999998742  23344445555555


Q ss_pred             HHHHHHHhccCCCCccccCCccEEEEeeCCCCCCC----------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890          296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  364 (398)
Q Consensus       296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-  364 (398)
                      ++.+.+ +..++.+....+. +.++++.+......          ..+++..++ ++||.+.|+     .+++|++++. 
T Consensus       352 ~~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----~~~iRi~~~~~  423 (448)
T 3dod_A          352 HFLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-----GDVIAFLPPLA  423 (448)
T ss_dssp             HHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----TTEEEECCCTT
T ss_pred             HHHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----CCEEEEECCCC
Confidence            666666 6666543344444 66777777643211          256777776 789999886     3799998765 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015890          365 LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .+++++++++++|.++++++..
T Consensus       424 ~t~e~i~~~l~~l~~~l~~~~~  445 (448)
T 3dod_A          424 STAEELSEMVAIMKQAIHEVTS  445 (448)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Confidence            7999999999999999988753

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=6.5e-34  Score=267.82  Aligned_cols=335  Identities=14%  Similarity=0.055  Sum_probs=225.9

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      .++.+.|+.+.+. ++||.+.+++.+.+.+..   ...|....+..+..+.+.+++.+.++.++++|++++|+++++..+
T Consensus        18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~   96 (400)
T 3vax_A           18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA   96 (400)
T ss_dssp             ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred             cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence            3556666666544 568999999988875310   111222223345566677777777788888999999999999999


Q ss_pred             HHHhc----cCCC-EEEEeCCCCcChhhHHHh---cCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          106 VLTLC----DAGD-SVVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       106 ~~~l~----~~gd-~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      +.+++    ++|| +|+++.++|+++...++.   .|++++.+ +.++ ++.+|+++|++.+++++  ++|++++|+|||
T Consensus        97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~--~~v~~~~~~npt  172 (400)
T 3vax_A           97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFL-TPGP-SGRISVEGVMERLRPDT--LLVSLMHVNNET  172 (400)
T ss_dssp             HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEE-CCCT-TCCCCHHHHHTTCCTTE--EEEECCSBCTTT
T ss_pred             HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEE-ccCC-CCCcCHHHHHHhcCCCc--eEEEEECCCCCc
Confidence            99998    8999 999999999887655543   69999999 8775 45789999999998764  999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEE-ccCCcHHHH---
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFA---  252 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~---  252 (398)
                      |.+++   +++|.++|+++|+++|+|++| ++.......  .. .+++++|+||.+|++|  +|+++ +++  +.+.   
T Consensus       173 G~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~~~~--~~-~d~~~~s~~K~~g~~g--~g~~~~~~~--~~~~~~~  242 (400)
T 3vax_A          173 GVIQP---VAELAQQLRATPTYLHVDAAQGYGKVPGDLT--TP-IDMISISGHKIGAPKG--VGALVTRRR--EEMDDER  242 (400)
T ss_dssp             CBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSGGGGG--SC-CSEEEEETGGGTSCSS--CEEEEECBC--SSSTTCB
T ss_pred             eeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCCcChh--hc-CcEEEEeHHHhCCCCc--eEEEEEecc--hhccccc
Confidence            99999   899999999999999999999 443221111  12 4488999999877555  57776 664  1111   


Q ss_pred             HHHHHhh-------ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc---cEEEEe
Q 015890          253 TQLLKVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWA  322 (398)
Q Consensus       253 ~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~~~~~~  322 (398)
                      ..+....       .....+.+...+.++..+++...+++++..+++.++++++.+.|+ .+++.+..+.+   ++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~  321 (400)
T 3vax_A          243 VPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNL  321 (400)
T ss_dssp             CCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEE
T ss_pred             cccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEE
Confidence            1111111       122445677777777777764334568888889999999999998 66656665553   356667


Q ss_pred             eCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEe-cC-CCHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISF-GG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~-~~-~~~~~~~~~~~~l~~~~  381 (398)
                      .++.  .+..++.+.| . +||.+++|..|..                   ++++||++ +. .+++++++++++|++++
T Consensus       322 ~~~~--~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  397 (400)
T 3vax_A          322 SFED--VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK  397 (400)
T ss_dssp             ECTT--CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred             EeCC--CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence            7763  3577788776 4 8999999875532                   48999999 75 67899999999998877


Q ss_pred             HH
Q 015890          382 EE  383 (398)
Q Consensus       382 ~~  383 (398)
                      ++
T Consensus       398 ~~  399 (400)
T 3vax_A          398 PS  399 (400)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=7.9e-33  Score=260.00  Aligned_cols=333  Identities=12%  Similarity=0.081  Sum_probs=236.8

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||+.|.  ++++ +||.+.+++.+.+.....  +.. ....+.++.+++.+.+.++.+++++++++|+++++..
T Consensus        43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~  119 (395)
T 1vef_A           43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA--MPQ-TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEA  119 (395)
T ss_dssp             TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC--CCT-TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCC--Ccc-ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHH
Confidence            467799998875  5555 899999999998864221  111 1123455666666666667778899999999999999


Q ss_pred             HHHHhc--cCCCEEEEeCCCCcChh-hHHHhcCcEEEE---eccCCCCC---CCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       105 ~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~---~~~~~~~~---~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      ++.++.  .+|++|++++|+|++.. ..++..|.+.+.   . |...+.   ...|+++|++.++++  +++|++++++|
T Consensus       120 al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~-p~~~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~  196 (395)
T 1vef_A          120 ALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFL-PLVEPVEFIPYNDVEALKRAVDEE--TAAVILEPVQG  196 (395)
T ss_dssp             HHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGC-SCSSCEEEECTTCHHHHHHHCCTT--EEEEEECSEET
T ss_pred             HHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccC-CCCCCeeEeCCCcHHHHHHHhccC--EEEEEEeCccC
Confidence            998874  67899999999997654 455556654210   1 111110   014899999999864  48888877789


Q ss_pred             CCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       176 ptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      |||.+ .+.+++++|.++|+++|+++|+||+|  +.+.+....  .......++  |+||.++ +|+|+||++++   ++
T Consensus       197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~g~~~G~~~~~---~~  270 (395)
T 1vef_A          197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-GGVPLGVAVMR---EE  270 (395)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSCEEEEEE---HH
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEccccc-CCCceEEEEeh---HH
Confidence            99986 46888999999999999999999999  544443221  111111233  8899998 48999999998   67


Q ss_pred             HHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCCC
Q 015890          251 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL  329 (398)
Q Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~  329 (398)
                      +++.+.......+++.+.+.++++.++++....  .+..++++++++++.+.|++++...+ ..+..++++++.++.   
T Consensus       271 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~---  345 (395)
T 1vef_A          271 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE---  345 (395)
T ss_dssp             HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---
T ss_pred             HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---
Confidence            776665432344567788888888888874211  34567778888889888887654111 112336788888864   


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +..++.+.|++++||.+.++    .++++||+++. .+++++++++++|++++
T Consensus       346 ~~~~l~~~l~~~~gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          346 KAAPYIARLEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             CSHHHHHHHHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            25678887764789999986    36899999875 78999999999998875

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=100.00  E-value=9.1e-32  Score=252.15  Aligned_cols=321  Identities=13%  Similarity=0.137  Sum_probs=234.7

Q ss_pred             CccCCCCC-c---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-cc
Q 015890           37 QGVVYWQP-P---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CD  111 (398)
Q Consensus        37 ~g~~~~~~-~---~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~  111 (398)
                      .+.|++++ |   +++++++.+.+... ...|.+..+..++++.+++++    +.+ +.|++++| |+|++.++.++ ++
T Consensus         4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~l~~~la~~~----~~~-~~i~~~sG-t~al~~~l~~l~~~   76 (388)
T 1b9h_A            4 RKAPEFPAWPQYDDAERNGLVRALEQG-QWWRMGGDEVNSFEREFAAHH----GAA-HALAVTNG-THALELALQVMGVG   76 (388)
T ss_dssp             -CCCCCCCSSCCCHHHHHHHHHHHHTS-CCBTTTCSHHHHHHHHHHHHT----TCS-EEEEESCH-HHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCCCCCHHHHHHHHHHHHcC-CeeecCCHHHHHHHHHHHHHh----CCC-eEEEeCCH-HHHHHHHHHHcCCC
Confidence            34566665 5   89999999988764 245667778899999999988    333 45666655 89999999999 89


Q ss_pred             CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      +||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.+++++  ++|+   |+||||.+.+   +++|.+
T Consensus        77 ~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~i~~  147 (388)
T 1b9h_A           77 PGTEVIVPAFTFISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIM---PVHMAGLMAD---MDALAK  147 (388)
T ss_dssp             TTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHHHHH
T ss_pred             CcCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCccCcCC---HHHHHH
Confidence            99999999999999999999999999999 8876667889999999997643  7766   8999999998   899999


Q ss_pred             HHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--HHHHHHhhcc-----
Q 015890          192 LCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDN-----  261 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--~~~l~~~~~~-----  261 (398)
                      +|+++|+++|+|++| .+  +.+.....  .+ ++++.|+||..+++|.++||+++++  +.+  ++.+......     
T Consensus       148 la~~~~~~li~D~a~~~g~~~~~~~~~~--~~-~i~~~S~s~~K~l~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~  222 (388)
T 1b9h_A          148 ISADTGVPLLQDAAHAHGARWQGKRVGE--LD-SIATFSFQNGKLMTAGEGGAVVFPD--GETEKYETAFLRHSCGRPRD  222 (388)
T ss_dssp             HHHHHTCCBCEECTTCTTCEETTEEGGG--SS-SCEEEECCTTSSSCSSSCEEEEECT--TCHHHHHHHHHHTBTTCCTT
T ss_pred             HHHHcCCEEEEecchhcCCccCCeeccc--cc-ceEEEEccCCCcccCCCeEEEEECC--HHHHHHHHHHHHHhCCCCcc
Confidence            999999999999999 32  33322221  11 4667788755555567899999884  224  5555433211     


Q ss_pred             ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc------CCccEEEEeeCC
Q 015890          262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG------GEGAIYLWARLP  325 (398)
Q Consensus       262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~~~~~~~~~~~~  325 (398)
                                .++..+....+++...++    ++++..++++++++++.+.|++++++.+..      +.+++++|+.++
T Consensus       223 ~~~~~~~~~g~~~~~~~~~~a~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (388)
T 1b9h_A          223 DRRYFHKIAGSNMRLNEFSASVLRAQLA----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIP  298 (388)
T ss_dssp             CSSCCCCSCCCBCBCBHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECT
T ss_pred             CccceeecccccCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeC
Confidence                      111234444444333333    356677778888999999998876555554      244688999987


Q ss_pred             CCC-CChHHHHHHHHHhcCeEEecCCCCC--C---------------------------CCeEEEEecC-C-CHHHHHHH
Q 015890          326 EKH-LDDFEVVRWLAHRHGVVVIPGGACG--C---------------------------RGHLRISFGG-L-VEDDCKAA  373 (398)
Q Consensus       326 ~~~-~~~~~~~~~ll~~~gi~v~~g~~~~--~---------------------------~~~iRi~~~~-~-~~~~~~~~  373 (398)
                      ... .+..++.+.|. ++||.++++....  .                           .+.||++++. . +++|++++
T Consensus       299 ~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~  377 (388)
T 1b9h_A          299 GLTEERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT  377 (388)
T ss_dssp             TCCHHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred             CcCcccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence            421 13566777775 7899998875321  0                           1259999988 7 89999999


Q ss_pred             HHHHHHHHHH
Q 015890          374 ADRLRRGLEE  383 (398)
Q Consensus       374 ~~~l~~~~~~  383 (398)
                      ++.|++++++
T Consensus       378 ~~~l~~~~~~  387 (388)
T 1b9h_A          378 AEIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999988754

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=3.8e-32  Score=252.11  Aligned_cols=325  Identities=11%  Similarity=0.049  Sum_probs=239.6

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHHHHHh
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      +.+.|..|  +.++|+++++++.+.+.+.....+.......++.+.+.+++.+.++.+ ++++++++|+++++..++.++
T Consensus         4 ~~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l   81 (362)
T 3ffr_A            4 NKIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC   81 (362)
T ss_dssp             CCEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred             cceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence            35566655  556789999888887766431112233344567777888888877774 678999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          110 CDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      .++  ++++..+.+++  +...++..|++++.+ +.+. ++.+|+|+|+  ++++  +++|++++|+||||.++|   ++
T Consensus        82 ~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~--~~~~--~~~v~~~~~~nptG~~~~---l~  150 (362)
T 3ffr_A           82 VEK--KSFHCVNGSFSKRFYEFAGELGREAYKE-EAAF-GKGFYPADIT--VPAD--AEIICLTHNETSSGVSMP---VE  150 (362)
T ss_dssp             CSS--EEEEEECSHHHHHHHHHHHHTTCEEEEE-ECCT-TCCCCGGGCC--CCTT--CCEEEEESEETTTTEECC---HH
T ss_pred             cCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEE-ecCC-CCCCCHHHHh--ccCC--ccEEEEEcCCCCcceeCC---HH
Confidence            977  55544444434  345677889999998 7754 3578999998  5554  599999999999999999   88


Q ss_pred             HHHHHHHHc-CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015890          188 RISDLCKAA-GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD----  260 (398)
Q Consensus       188 ~i~~l~~~~-~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l~~~~~----  260 (398)
                      +|.++|+++ |+++|+|++| +........    ..+++++|+||+++ ++|  +|+++.+   +++++.+.....    
T Consensus       151 ~i~~la~~~p~~~li~D~a~~~~~~~~~~~----~~d~~~~s~~K~~~~~~G--~g~~~~~---~~~~~~~~~~~~gg~~  221 (362)
T 3ffr_A          151 DINTFRDKNKDALIFVDAVSSLPYPKFDWT----KIDSVFFSVQKCFGLPAG--LGVWILN---DRVIEKSKALLAKRKS  221 (362)
T ss_dssp             HHTTSGGGSTTSEEEEECTTTTTSSCCCTT----SCSEEEEETTSTTCCCSC--CEEEEEE---HHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhCCCCEEEEecccccCCcccChh----HCcEEEEecccccCCCCc--eEEEEEC---HHHHHHhhhccccCCC
Confidence            999999999 9999999999 433221111    14488899999998 666  5778888   777777665432    


Q ss_pred             -----------------cCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC----CccE
Q 015890          261 -----------------NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAI  318 (398)
Q Consensus       261 -----------------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~~  318 (398)
                                       ...++.+...+.++..+++.. ...+++..+++.++++++.+.|++++++.+..+    ..+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~  301 (362)
T 3ffr_A          222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT  301 (362)
T ss_dssp             CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred             CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence                             114566777777777777631 122677888889999999999998865455542    2356


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      ++++.++.   +..++.+.|. ++||.+++|..+..++++|++++. .+++++++++++|++++
T Consensus       302 ~~~~~~~~---~~~~~~~~l~-~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          302 TIVANTTM---LPGEINKILE-PFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             EEEEEESS---CHHHHHHHHG-GGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             eEEEecCC---CHHHHHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            67777764   5778888875 669999999777678899999987 68899999999887653

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=100.00  E-value=5.3e-32  Score=257.00  Aligned_cols=333  Identities=10%  Similarity=0.066  Sum_probs=226.6

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||..|.  ++++ .+|.+.+++.+++.+..  .+.. ....+.+..+++.+.+.++  .++|++++|+++|++.
T Consensus        63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~  137 (433)
T 1z7d_A           63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT--ICSR-AFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANET  137 (433)
T ss_dssp             TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS--CCCT-TSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred             CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCC--CccC-CcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHH
Confidence            577899998864  4666 89999999999987632  1211 1234455555555555555  5789999999999999


Q ss_pred             HHHHhc---------cCC-CEEEEeCCCCcChhhH-HHhcC------------cEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890          105 IVLTLC---------DAG-DSVVMFAPYYFNSYMS-FQMTG------------VTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus       105 ~~~~l~---------~~g-d~Vl~~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      +++.+.         .+| ++|++++|+|+++... +...|            ..+..+ +.      .|++.|++.++.
T Consensus       138 al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l~~  210 (433)
T 1z7d_A          138 AYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKV-PY------DDLEALEEELKD  210 (433)
T ss_dssp             HHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEE-CT------TCHHHHHHHHTS
T ss_pred             HHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEe-CC------CCHHHHHHHhCC
Confidence            998864         367 8999999999886542 33323            123333 22      289999999952


Q ss_pred             CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-c
Q 015890          162 KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-W  237 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~  237 (398)
                      . .+++|+++..+|++|.+ ++++++++|.++|++||+++|+||+|  +++.+........+....+.|+||.+| +| +
T Consensus       211 ~-~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~G~~  288 (433)
T 1z7d_A          211 P-NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALS-GGHY  288 (433)
T ss_dssp             T-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTSS
T ss_pred             C-CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECcccc-CCCC
Confidence            2 25787777667789985 68889999999999999999999999  555453322111111111238899998 89 8


Q ss_pred             eeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCcccc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG  313 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~  313 (398)
                      |+||++++   +++++.+.......+++.++++++++.++|+...+  ++..++.+++.+++.+.|+++    +.+....
T Consensus       289 ~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~  363 (433)
T 1z7d_A          289 PISAVLAN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVRDVR  363 (433)
T ss_dssp             CCEEEEEC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred             CeEEEEEC---HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            99999999   77777665443455677888999888888874211  134455555666666655543    3222233


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +. ++++++.++....+..+++..|+ ++||.+.|+    ..+++|++++. .+++++++++++|.++++++.
T Consensus       364 ~~-g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  430 (433)
T 1z7d_A          364 GK-GLLCAIEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD  430 (433)
T ss_dssp             EE-TTEEEEEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             ee-eeEEEEEEccChhHHHHHHHHHH-HCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            33 67788888643124677888876 789999885    36799999876 799999999999999988753

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=2.1e-32  Score=256.10  Aligned_cols=329  Identities=13%  Similarity=0.066  Sum_probs=240.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ++.+.|..|  +..+++++++++.+....    .|.+.  ....++++.+++++....++++++|++++|+++++..++.
T Consensus         4 ~~~~~~~p~--p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~   77 (385)
T 2bkw_A            4 SVDTLLIPG--PIILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS   77 (385)
T ss_dssp             CCCEECSSS--SCCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred             ccceeecCC--CcCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence            445666665  555788998888765432    12121  1345677788888766556667899999999999999999


Q ss_pred             Hhc---cCCCEEEEeC-CCCcCh-hhHHHhcCcEEEEeccC-CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          108 TLC---DAGDSVVMFA-PYYFNS-YMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       108 ~l~---~~gd~Vl~~~-p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      ++.   ++||+|+++. +.|+.. ...++..|++++.+ +. +. ++.+|++.|++.+++.. +++|++++|+||||.++
T Consensus        78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~d~~~l~~~l~~~~-~~~v~~~~~~nptG~~~  154 (385)
T 2bkw_A           78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKI-GESVPLELITEKLSQNS-YGAVTVTHVDTSTAVLS  154 (385)
T ss_dssp             HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEE-CCSST-TSCCCHHHHHHHHHHSC-CSEEEEESEETTTTEEC
T ss_pred             HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEE-ecCCC-CCCCCHHHHHHHHhcCC-CCEEEEEccCCCcCeEc
Confidence            998   8999998884 455554 36678889999999 77 54 45689999999998622 59999999999999999


Q ss_pred             CHHHHHHHHHHHHHc--CCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHH-HHH
Q 015890          182 PERLLKRISDLCKAA--GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFAT-QLL  256 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~--~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~-~l~  256 (398)
                      +   +++|.++|+++  |+++|+|++| ++....  .....+.+++++|+||+++ ++|  +||++++   +++++ .+.
T Consensus       155 ~---l~~i~~~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~---~~~~~~~l~  224 (385)
T 2bkw_A          155 D---LKAISQAIKQTSPETFFVVDAVCSIGCEEF--EFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYALN  224 (385)
T ss_dssp             C---HHHHHHHHHHHCTTSEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHHTC
T ss_pred             C---HHHHHHHHHhhCCCCEEEEECccccCCccc--cccccCceEEEecCccccccCCc--ceEEEEc---HHHHHHHHh
Confidence            9   88999999999  9999999999 443221  1222345688999999764 455  5999988   56655 331


Q ss_pred             ----------------------Hhhc---cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHh-ccCCCC
Q 015890          257 ----------------------KVQD---NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL-SPLGEG  309 (398)
Q Consensus       257 ----------------------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l-~~~~~~  309 (398)
                                            ....   ...++.+...+.++..+++...+. +++..++++++++++.+.| ++++ +
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~  303 (385)
T 2bkw_A          225 DSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-L  303 (385)
T ss_dssp             HHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-C
T ss_pred             hccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-c
Confidence                                  1111   012456777777777777642223 5677888889999999999 8874 3


Q ss_pred             ccccC-----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-CCCeEEEE-ec----CCCHHHHHHHHHHHH
Q 015890          310 AVKGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRIS-FG----GLVEDDCKAAADRLR  378 (398)
Q Consensus       310 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~-~~----~~~~~~~~~~~~~l~  378 (398)
                      .+..+     ..++++++.++.    ..++.++|. ++||.+.+|..+. .++++|++ ++    ..+++++++++++|+
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~  378 (385)
T 2bkw_A          304 TSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIK  378 (385)
T ss_dssp             EESSCSSSTTBCSSCEEEECSC----HHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred             eecccCcccccCCceEEEecCC----HHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHH
Confidence            55532     246788888863    667888775 7899999987643 46789999 66    258899999999998


Q ss_pred             HHHHH
Q 015890          379 RGLEE  383 (398)
Q Consensus       379 ~~~~~  383 (398)
                      +++++
T Consensus       379 ~~~~~  383 (385)
T 2bkw_A          379 LALQR  383 (385)
T ss_dssp             HHTTC
T ss_pred             HHHHh
Confidence            87653

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=100.00  E-value=2e-32  Score=262.12  Aligned_cols=346  Identities=13%  Similarity=0.034  Sum_probs=238.4

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|  .++++ .+|++.+|+.+++.+.. +.|....+..+.+..+++.+.+..+.+.++|++++|+++|++
T Consensus        52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~  130 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND  130 (472)
T ss_dssp             TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence            457889999987  55665 58999999999987632 233333445667778888887777766789999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCc------------EEEEeccCCC----CCCCCC--------
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSS----KTLHPD--------  151 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~----~~~~~d--------  151 (398)
                      .+++.++.        ++++|++..++|+++...+...+.            .+..+ +.+.    ..+ .|        
T Consensus       131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~-~~~~~~~~~~  208 (472)
T 3hmu_A          131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHI-NQPNWWAEGGD-MDPEEFGLAR  208 (472)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEe-CCCccccCCcc-cCHHHHHHHH
Confidence            99999874        458999999999987765544432            23334 3221    111 23        


Q ss_pred             hHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEc
Q 015890          152 ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       152 ~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~  226 (398)
                      +++|++.++.  ...+++|+++.+++++|.+. +++++++|.++|++||+++|+||+|  |++.|........+....+.
T Consensus       209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~  288 (472)
T 3hmu_A          209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM  288 (472)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee
Confidence            7888888862  12257777777788888755 8889999999999999999999999  66655322211111111133


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCC--chHHHHHH-HHHHHHHHHHHH
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREIIRE  301 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l~~  301 (398)
                      ++||+++.+|+|+|+++++   +++++.+..  .....+++.++++++++.++|+..  ++..++.. +.....++.+ +
T Consensus       289 t~sK~l~gg~~plG~v~~~---~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L-~  364 (472)
T 3hmu_A          289 TIAKGLSSGYAPIGGSIVC---DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKW-E  364 (472)
T ss_dssp             EECGGGTTTSSCCEEEEEE---HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHH-H
T ss_pred             eechhhhcCCcceEEEEEC---HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-H
Confidence            6789998455999999998   888888832  233457788999999999998742  12233333 2333333444 3


Q ss_pred             HhccCCCCccccCCccEEEEeeCCCCCC-----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          302 ALSPLGEGAVKGGEGAIYLWARLPEKHL-----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       302 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      .|.+.+.+....+. ++++++.+.....           ...++...++ ++||.++++.     ++|||++.. .++++
T Consensus       365 ~l~~~~~v~~vr~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~p~~~~t~e~  437 (472)
T 3hmu_A          365 ALTDHPLVGEAKIV-GMMASIALTPNKASRAKFASEPGTIGYICRERCF-ANNLIMRHVG-----DRMIISPPLVITPAE  437 (472)
T ss_dssp             GGGGSTTEEEEEEE-TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH-HTTBCCEEET-----TEEEECCCTTCCHHH
T ss_pred             HHhcCCCeEEEEec-CceEEEEEecCccccccccchhHHHHHHHHHHHH-HCCcEEEecC-----CEEEEECCCCCCHHH
Confidence            34444544445555 5666666643210           1446677675 7899999862     899999665 69999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 015890          370 CKAAADRLRRGLEELVK  386 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++|.++++++.+
T Consensus       438 i~~~l~~l~~~l~~~~~  454 (472)
T 3hmu_A          438 IDEMFVRIRKSLDEAQA  454 (472)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999977653

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=100.00  E-value=2.6e-32  Score=259.55  Aligned_cols=333  Identities=14%  Similarity=0.091  Sum_probs=222.1

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCC-----C----cHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE-----G----LPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~-----~----~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      ++.+.|+.+.+. ++||.+++++.+.+.+  ...|+...     +    ..++++.+++++    ++++++|++++|+++
T Consensus        17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~   89 (432)
T 3a9z_A           17 NRKVYMDYNATT-PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI----GGKPQDIIFTSGGTE   89 (432)
T ss_dssp             -CCEECBTTTCC-CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH----TCCGGGEEEESCHHH
T ss_pred             CCcEEeeCCccC-CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc----CCCcCeEEEeCChHH
Confidence            567888887766 6789999999988754  22342211     1    135555555554    777789999999999


Q ss_pred             HHHHHHHHhc--------cCCCEEEEeCCCCcCh-----------------hhHHHhcCcEEEEeccCCCCCCCCChHHH
Q 015890          101 AFVNIVLTLC--------DAGDSVVMFAPYYFNS-----------------YMSFQMTGVTHILVGPCSSKTLHPDADWL  155 (398)
Q Consensus       101 a~~~~~~~l~--------~~gd~Vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~~d~e~l  155 (398)
                      ++..++.+++        ++||+|+++.|+|+++                 ...++..|.+++.+ +.++.++.+|++.|
T Consensus        90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l  168 (432)
T 3a9z_A           90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFV-PVSKVNGQVEVEDI  168 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEE-CCCTTTSSCCHHHH
T ss_pred             HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEE-ecCcccCCcCHHHH
Confidence            9999999986        5899999999999765                 23345578999999 87653457899999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEeece-eccCCCccccccCCcEEE
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG----------SWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~----------~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                      ++.++++  +++|++++|+||||.+++   +++|.++|+++|          +++|+|++| ++.........  +..++
T Consensus       169 ~~~i~~~--~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~--~~d~~  241 (432)
T 3a9z_A          169 LAAVRPT--TCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL--GVDFL  241 (432)
T ss_dssp             HHTCCTT--EEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH--CCSEE
T ss_pred             HHhccCC--ceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc--CCCEE
Confidence            9999865  499999999999999999   788999999999          999999999 43221111111  23366


Q ss_pred             EcccccccCCCcceeEEEEccCCcHHH-HHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890          225 LFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  296 (398)
Q Consensus       225 ~~s~sK~~~~~G~r~G~i~~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  296 (398)
                      +.|+||++|   .|+||+++++   +. ...+...       .....++.+.+.+.++.++++...+++++..+++.+++
T Consensus       242 ~~s~~K~~g---~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~  315 (432)
T 3a9z_A          242 TIVGHKFYG---PRIGALYVRG---VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIR  315 (432)
T ss_dssp             EEEGGGTTC---CSCEEEEETT---BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEehhHhcC---CcceEEEEcc---ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            899999875   4589999984   32 2222111       11223567778887777777653456778888888899


Q ss_pred             HHHHHHhccCCCCccc--cC-----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC---------------
Q 015890          297 EIIREALSPLGEGAVK--GG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------------  354 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------  354 (398)
                      +++.+.|+++++..+.  .+     ..+..+++.++....+..++...+   .++.+..|..|..               
T Consensus       316 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~  392 (432)
T 3a9z_A          316 DYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGI  392 (432)
T ss_dssp             HHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTC
T ss_pred             HHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCC
Confidence            9999888774222221  22     112344445543212344555433   3788777754421               


Q ss_pred             -----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          355 -----RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       355 -----~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                           .++|||+++. .+++++++++++|+++++++.+
T Consensus       393 ~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~  430 (432)
T 3a9z_A          393 PVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG  430 (432)
T ss_dssp             CHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred             CccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence                 3789999997 6899999999999999987654

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=2.1e-32  Score=260.22  Aligned_cols=341  Identities=10%  Similarity=0.029  Sum_probs=229.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ++++ .+|++.+++.+++.+.....| +.....++++.++++    ++ ++++|++++|++++++
T Consensus        52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~----~~-~~~~v~~~~sGsea~~  125 (434)
T 3l44_A           52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEA----MP-ALDKVRFVNSGTEAVM  125 (434)
T ss_dssp             TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHH----CT-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHh----CC-CCCEEEEeCchHHHHH
Confidence            4678899999876  4554 589999999998876433334 444444555555554    44 5789999999999999


Q ss_pred             HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcE-EEEeccCCC-CCC------------CCChHHHHHhhccC-CCCe
Q 015890          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSS-KTL------------HPDADWLEKTLETK-PTPK  166 (398)
Q Consensus       104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~-~~~------------~~d~e~l~~~l~~~-~~~~  166 (398)
                      .+++.+..  ++++|+++.|+|+++...+...+.. ...+ ..+. .+.            ..|+++|++.++.. ..++
T Consensus       126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  204 (434)
T 3l44_A          126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTL-GTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVA  204 (434)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------C-CCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCccccc-CCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEE
Confidence            99998764  6789999999999876544433321 1111 1110 010            01889999998731 1246


Q ss_pred             EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       167 ~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +|++++++|++|.+. +++++++|.++|++||+++|+||+|  | ..+........+....+.|+||.++ +|+|+||++
T Consensus       205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~  282 (434)
T 3l44_A          205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIG-GGLPIGAYG  282 (434)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGG-TTSSCEEEE
T ss_pred             EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhc-CCcCeeeEE
Confidence            677766667777765 8889999999999999999999999  5 4443221111111122458899998 899999999


Q ss_pred             ccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890          244 YPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  318 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  318 (398)
                      ++   +++++.+...   ....+++.++++++++.++++.  .++..++..+.....++.+.+.+...+......+. ++
T Consensus       283 ~~---~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~  358 (434)
T 3l44_A          283 GK---KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRL-KG  358 (434)
T ss_dssp             EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE-TT
T ss_pred             Ec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEee-cc
Confidence            88   7888776542   2345678899999999888874  12334444444444455555554445553344444 66


Q ss_pred             EEEeeCCCCCC------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          319 YLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       319 ~~~~~~~~~~~------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      ++++.+.....            ...++...|+ ++||.++++.    .+.+|+++. .+++++++++++|+++++++.+
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~~~  432 (434)
T 3l44_A          359 ALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK----YEAWFLTTE-HTKEDIEYTIEAVGRAFAALAD  432 (434)
T ss_dssp             EEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST----TCCEECCTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC----CCcEEEecc-cCHHHHHHHHHHHHHHHHHHHh
Confidence            66666632211            1245666665 7899999874    467898765 5999999999999999988754

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=100.00  E-value=7.8e-32  Score=258.90  Aligned_cols=360  Identities=17%  Similarity=0.170  Sum_probs=258.4

Q ss_pred             hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHH
Q 015890            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKL   81 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l   81 (398)
                      ++++...+.+.+..+.+.....++.++|..+.++  +|+.+++++.+.+.+....+|      +......++++.+++++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~   99 (483)
T 1rv3_A           22 AQPLKDSDAEVYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA   99 (483)
T ss_dssp             TSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence            4455566666666666655555678999877654  689999999988866321133      22334567888888999


Q ss_pred             hhhcCCCCCc----EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH--------HHhcC--cEEEEeccCCCCC
Q 015890           82 NQENKLYKSS----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS--------FQMTG--VTHILVGPCSSKT  147 (398)
Q Consensus        82 ~~~~~~~~~~----v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~~  147 (398)
                      ++++|.++++    |++++|+ +++..++.+++++||+|+++++.|.++...        ++..|  ++++.+ +.++++
T Consensus       100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~-~~~~~~  177 (483)
T 1rv3_A          100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPDT  177 (483)
T ss_dssp             HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTTT
T ss_pred             HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC-ccccCC
Confidence            9999987643    7777777 999998999999999999999999776532        23334  566666 666556


Q ss_pred             CCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEE
Q 015890          148 LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       148 ~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i  223 (398)
                      +.+|+|+|++.++ +++  ++|++ +++|++ .+++   +++|.++|+++|+++|+|++|   +.+.+....... ..++
T Consensus       178 ~~iD~d~le~~i~~~~t--klIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~di  249 (483)
T 1rv3_A          178 GYIDYDRLEENARLFHP--KLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHV  249 (483)
T ss_dssp             CSBCHHHHHHHHHHHCC--SEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSE
T ss_pred             CcCCHHHHHHHHhhcCC--cEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCcE
Confidence            7899999999998 554  99998 888888 8888   999999999999999999998   233332222221 2347


Q ss_pred             EEcccccccCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERV  289 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~  289 (398)
                      +++|+||++  +|+|.||+++++...            ++.+.+.... .....+++...+++...+++. ...+++++.
T Consensus       250 v~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~  327 (483)
T 1rv3_A          250 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ  327 (483)
T ss_dssp             EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             EEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence            889999988  478889999985311            2344443322 222345556666666666654 235678888


Q ss_pred             HHHHHHHHHHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe----cCCCCC-CCCeEEEEec
Q 015890          290 KDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGACG-CRGHLRISFG  363 (398)
Q Consensus       290 ~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~iRi~~~  363 (398)
                      +++.++++++.+.|.+.+. .+..+. +..++++.+.....+..++... |++.||.+.    ||..+. .++++||+++
T Consensus       328 ~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~v~~~~~g~~~~~~~~~-L~~~gI~v~~~~~pg~~~~~~~~~iRis~~  405 (483)
T 1rv3_A          328 RQVVANCRALSAALVELGY-KIVTGGSDNHLILVDLRSKGTDGGRAEKV-LEACSIACNKNTCPGDKSALRPSGLRLGTP  405 (483)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEEGGGGTCCHHHHHHH-HHHTTEECEEECCSSCSCTTSCCEEEEECH
T ss_pred             HHHHHHHHHHHHHHHhcCC-EeccCCCCCceEEEeccCCCCCHHHHHHH-HHhCCcEEecCCCCCCCcCCCCceEEeecC
Confidence            8999999999999988754 655442 3467788886433356666654 468999999    876432 4679999988


Q ss_pred             C-CC----HHHHHHHHHHHHHHHHH
Q 015890          364 G-LV----EDDCKAAADRLRRGLEE  383 (398)
Q Consensus       364 ~-~~----~~~~~~~~~~l~~~~~~  383 (398)
                      . ++    ++++++++++|.++++.
T Consensus       406 ~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          406 ALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHh
Confidence            5 34    89999999999999876

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=100.00  E-value=3.2e-32  Score=256.09  Aligned_cols=324  Identities=16%  Similarity=0.162  Sum_probs=242.2

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .+++||+.|.++++  +++.+++.+.+...   .|.+..+..++++.+++++    +.  +++++++|+++++..++.++
T Consensus        30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~----~~--~~~v~~~~Gt~a~~~~l~~~   98 (399)
T 2oga_A           30 VPFLDLKAAYEELR--AETDAAIARVLDSG---RYLLGPELEGFEAEFAAYC----ET--DHAVGVNSGMDALQLALRGL   98 (399)
T ss_dssp             BCSCCHHHHHHHTH--HHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHT----TS--SEEEEESCHHHHHHHHHHHT
T ss_pred             CcccccCcCCCCCC--HHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHH----CC--CeEEEecCHHHHHHHHHHHh
Confidence            57999999887653  89999999887542   4656667788888888887    43  26778888899999999999


Q ss_pred             -ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 -~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                       +++||+|+++.|+|+++...++..|.+++.+ +.+++++.+|++.+++.++++  +++|+   ++||||.+.+   +++
T Consensus        99 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~---~~n~tG~~~~---l~~  169 (399)
T 2oga_A           99 GIGPGDEVIVPSHTYIASWLAVSATGATPVPV-EPHEDHPTLDPLLVEKAITPR--TRALL---PVHLYGHPAD---MDA  169 (399)
T ss_dssp             TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCSSSSSBCHHHHHHHCCTT--EEEEC---CBCGGGCCCC---HHH
T ss_pred             CCCCcCEEEECCCccHHHHHHHHHCCCEEEEE-ecCCCCCCcCHHHHHHhcCCC--CeEEE---EeCCcCCccC---HHH
Confidence             8999999999999999999999999999999 877655678999999999864  47776   5689999998   899


Q ss_pred             HHHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015890          189 ISDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--  261 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~--  261 (398)
                      |.++|+++|+++|+|++| +.  +++.....  . .++++.|+  +|.+|.+| ++|+++.++  +++++.+......  
T Consensus       170 i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~--~-~di~~~S~~~sK~~~~~G-~~g~~~~~~--~~~~~~l~~~~~~g~  243 (399)
T 2oga_A          170 LRELADRHGLHIVEDAAQAHGARYRGRRIGA--G-SSVAAFSFYPGKNLGCFG-DGGAVVTGD--PELAERLRMLRNYGS  243 (399)
T ss_dssp             HHHHHHHHTCEECEECTTCTTCEETTEETTC--T-TCEEEEECCTTSSSCCSS-CCEEEEESC--HHHHHHHHHHHBTTC
T ss_pred             HHHHHHHcCCEEEEECcccccCccCCeeccc--c-cCEEEEeCCCCccCCcCC-ceEEEEeCC--HHHHHHHHHHHhcCc
Confidence            999999999999999999 32  33322111  1 24778888  79999778 899998865  6787777665432  


Q ss_pred             ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCCCC
Q 015890          262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLD  330 (398)
Q Consensus       262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~  330 (398)
                                .++..+...++++.+.++.    +++..++.+++++++.+.|++++++.+. .+..++++|+.++....+
T Consensus       244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~  319 (399)
T 2oga_A          244 RQKYSHETKGTNSRLDEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTER  319 (399)
T ss_dssp             SSTTCCCSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSS
T ss_pred             cccccccccccCCCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCC
Confidence                      1234566777776667654    3445556667788899999887554553 243455554322211125


Q ss_pred             hHHHHHHHHHhcCeEEecCCCCC-----------C------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGGACG-----------C------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~~-----------~------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ..++.+.|. ++||.++++....           .            .+.|||+++. .+++|+++++++|+++++++
T Consensus       320 ~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l  396 (399)
T 2oga_A          320 RDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV  396 (399)
T ss_dssp             HHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            677888775 7899998754210           0            1579999987 79999999999999988754

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=100.00  E-value=5.3e-32  Score=259.60  Aligned_cols=345  Identities=11%  Similarity=0.037  Sum_probs=243.2

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|  .+.++ .+|++.+|+.+++.+.. + +....+..+.+.++++++.+.++.+.+.|++++|+++|++
T Consensus        51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~-~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~  128 (476)
T 3i5t_A           51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-Y-ASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVD  128 (476)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-C-CCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-C-cccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHH
Confidence            467889999987  45565 58999999999987631 1 2122456788899999999888777789999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhhHHHhcCcE-------------EEEeccCCC--CCCCCC--------h
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSS--KTLHPD--------A  152 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d--------~  152 (398)
                      .+++.++.        .+++|++..|+|+++...+...+..             +..+ +.+.  ..+..+        +
T Consensus       129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  207 (476)
T 3i5t_A          129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFL-SSPNPRHAGNRSQEAFLDDLV  207 (476)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEE-CCCCGGGCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEe-CCCcccccCCCchHHHHHHHH
Confidence            99999863        3579999999999887655443321             2222 2111  001112        7


Q ss_pred             HHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc-cCCcEEEEc
Q 015890          153 DWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-EGDHVVNLF  226 (398)
Q Consensus       153 e~l~~~l~~-~-~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~-~~~~~i~~~  226 (398)
                      ++|++.++. . ..+++|+++.++|++|. +++++++++|.++|++||+++|+||+|  |++.|...... ..+....+.
T Consensus       208 ~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~  287 (476)
T 3i5t_A          208 QEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII  287 (476)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh
Confidence            889888862 1 22578888888888886 788999999999999999999999999  66666432222 111111133


Q ss_pred             ccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          227 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       227 s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      ++||.++ +| +|+|+++++   +++++.+...       ....+++.++++++++.++|+...+  ++..++.+++.++
T Consensus       288 t~sK~l~-~G~~plg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~  361 (476)
T 3i5t_A          288 TFAKGVT-SGYVPLGGLAIS---EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--EGIVDQAREMADY  361 (476)
T ss_dssp             EECGGGG-TTSSCCEEEEEC---HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHH
T ss_pred             hhhhhhc-CCCcCeEEEEEC---HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh--HHHHHHHHHHHHH
Confidence            6789998 68 999999998   8888877653       3345778899999999999974211  2334444555555


Q ss_pred             HHHHhcc---CCCCccccCCccEEEEeeCCCCCC----------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890          299 IREALSP---LGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  364 (398)
Q Consensus       299 l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-  364 (398)
                      +++.|+.   .+.+....+. +.++++.+.....          ....++..++ ++||.+.+.     .+++||++.. 
T Consensus       362 l~~~L~~l~~~~~v~~v~~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRi~p~l~  434 (476)
T 3i5t_A          362 FAAALASLRDLPGVAETRSV-GLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPL-----GDLCVISPPLI  434 (476)
T ss_dssp             HHHHHHTTTTSTTEEEEEEE-TTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTT
T ss_pred             HHHHHHHHhcCCCeEEEEec-CceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEec-----CCEEEEECCCC
Confidence            5555543   4444444555 5666677654211          1345667665 789999984     2899999665 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          365 LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      .+++++++++++|.++++++.++
T Consensus       435 ~t~e~i~~~l~~l~~~l~~~~~~  457 (476)
T 3i5t_A          435 ISRAQIDEMVAIMRQAITEVSAA  457 (476)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHH
Confidence            69999999999999999887653

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=4.9e-32  Score=258.57  Aligned_cols=344  Identities=15%  Similarity=0.055  Sum_probs=236.5

Q ss_pred             cCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHH
Q 015890           28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV  103 (398)
Q Consensus        28 ~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~  103 (398)
                      +|+.++||..|  .++++ .+|++.+++.+++.+.  ..|....+..+.+.++++++.+.++.. .++|++++|+++|++
T Consensus        59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  136 (451)
T 3oks_A           59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE  136 (451)
T ss_dssp             TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred             CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence            57889999987  45555 4899999999998763  335444566778888888888877644 578999999999999


Q ss_pred             HHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCC-----------CCC-CCChHHH
Q 015890          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-----------KTL-HPDADWL  155 (398)
Q Consensus       104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-----------~~~-~~d~e~l  155 (398)
                      .+++.+..  .+++|++..++|+++...+...+.              .+..+ +.+.           +++ ..+++.+
T Consensus       137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~  215 (451)
T 3oks_A          137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRA-PLSYPFRDAEFGKELATDGELAAKRA  215 (451)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEE-CCCCHHHHGGGCTTTTTCHHHHHHHH
T ss_pred             HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccccchhhHHHHHHH
Confidence            99988764  448999999999987765543321              33344 3321           000 0124444


Q ss_pred             HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccc
Q 015890          156 EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSF  228 (398)
Q Consensus       156 ~~~l~----~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~  228 (398)
                      ++.++    ..+ +++|+++..+++.|. ..+++++++|.++|++||+++|+||+|  +.+.|........+....+.|+
T Consensus       216 ~~~l~~~~~~~~-~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~  294 (451)
T 3oks_A          216 ITVIDKQIGADN-LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVT  294 (451)
T ss_dssp             HHHHHHHTCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE
T ss_pred             HHHHHhhcCCCC-EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeee
Confidence            44443    233 455555544444455 457778999999999999999999999  6555543222222222223488


Q ss_pred             ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccC
Q 015890          229 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       229 sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      ||.++ +|+|+||++++   +++++.+.......+++.++++++++.++|+..  ++..++..+.....++.+.+.+++.
T Consensus       295 sK~l~-~G~~iG~v~~~---~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  370 (451)
T 3oks_A          295 AKGIA-GGLPLSAVTGR---AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAED  370 (451)
T ss_dssp             CGGGG-TTSSCEEEEEE---HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhh-CCcceEEEEEC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99998 59999999998   788887766666678889999999999998742  2334444444445555666655556


Q ss_pred             CCCccccCCccEEEEeeCCC------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPE------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      +.+....+. +.++++.+..      ......++...++ ++||.+.|+..+  .+++||+++. .+++++++++++|.+
T Consensus       371 ~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~  446 (451)
T 3oks_A          371 DRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEE  446 (451)
T ss_dssp             TTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            654444454 6677776632      0112445666665 889999997543  4689999877 689999999999999


Q ss_pred             HHHH
Q 015890          380 GLEE  383 (398)
Q Consensus       380 ~~~~  383 (398)
                      ++++
T Consensus       447 ~l~~  450 (451)
T 3oks_A          447 VLRG  450 (451)
T ss_dssp             HHHC
T ss_pred             HHhh
Confidence            8763

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=100.00  E-value=1.2e-31  Score=254.77  Aligned_cols=329  Identities=13%  Similarity=0.139  Sum_probs=236.4

Q ss_pred             cCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      +|+.++||..|.+  +++ .+|++.+++.+++.+....  .| +.....++++.+++++    +  .+++++++|+++|+
T Consensus        74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g--~~~v~~~~sGseA~  146 (439)
T 2oat_A           74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF----N--YHKVLPMNTGVEAG  146 (439)
T ss_dssp             TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc----C--CCEEEEeCCHHHHH
Confidence            4678999998754  455 8999999999998763211  12 2334455666666654    4  57899999999999


Q ss_pred             HHHHHHhc---------cCC-CEEEEeCCCCcChhh-HHHhcC------------cEEEEeccCCCCCCCCChHHHHHhh
Q 015890          103 VNIVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus       103 ~~~~~~l~---------~~g-d~Vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      +.+++++.         .+| |+|++++|+|++... .+...|            ..+..+ +.      .|+++|++.+
T Consensus       147 ~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l  219 (439)
T 2oat_A          147 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-PY------NDLPALERAL  219 (439)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE-CS------SCHHHHHHHT
T ss_pred             HHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe-CC------CCHHHHHHHh
Confidence            99999875         356 899999999988654 333334            344444 32      2899999999


Q ss_pred             ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      +... +++|+++..+|++|. .++++++++|.++|++||+++|+||+|  +++.|........+....+.|+||.++ +|
T Consensus       220 ~~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~-~G  297 (439)
T 2oat_A          220 QDPN-VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALS-GG  297 (439)
T ss_dssp             TSTT-EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TT
T ss_pred             CCCC-EEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEeccccc-CC
Confidence            5322 577777766788997 568889999999999999999999999  555453322111111111238899998 68


Q ss_pred             -ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc--ccc
Q 015890          237 -WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA--VKG  313 (398)
Q Consensus       237 -~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~~  313 (398)
                       +|+||++++   +++++.+.......+++.++++++++.++++...+  ++..++++++.+++.+.|++++...  ...
T Consensus       298 ~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~  372 (439)
T 2oat_A          298 LYPVSAVLCD---DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAVR  372 (439)
T ss_dssp             SSCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEE
T ss_pred             CCCeEEEEEC---HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence             899999999   77777665544455677888999888888874211  2456777888889999998764311  122


Q ss_pred             CCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +. ++++++.++... .+..+++..|+ ++||.+.|+    .++++|++++. .+++++++++++|.+++++
T Consensus       373 ~~-g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  438 (439)
T 2oat_A          373 GK-GLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS  438 (439)
T ss_dssp             EE-TTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBS----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ee-eeEEEEEEecCccHHHHHHHHHHH-HCCeEEecC----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence            33 677888886431 24677888776 789999984    36899998875 7899999999999988764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=100.00  E-value=4.8e-32  Score=258.56  Aligned_cols=341  Identities=10%  Similarity=0.003  Sum_probs=239.3

Q ss_pred             cCC--CeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           28 GAK--NAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~--~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      +|+  .|+||..|  .+.++ .+|++.+++.+++.+..  .+.......+....+++.+.+.++.+.++|++++|+++|+
T Consensus        71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~  148 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN--HVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSV  148 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS--CCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHH
T ss_pred             CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHH
Confidence            778  99999987  45565 68999999999886531  2211223345666777777776676778999999999999


Q ss_pred             HHHHHHhcc-------CC-CEEEEeCCCCcChhhHHHhcCc--------------EEEEeccCCCCCC-CCChHHHHHhh
Q 015890          103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSSKTL-HPDADWLEKTL  159 (398)
Q Consensus       103 ~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~-~~d~e~l~~~l  159 (398)
                      +.+++.++.       +| ++|++.+++|++....+...+.              .+..+ +.+..++ ..|++.|++.+
T Consensus       149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~d~~~le~~l  227 (457)
T 3tfu_A          149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFA-PQVPRDYDPAYSAAFEAQL  227 (457)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEE-CCCCSSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEe-cCCCcccCHHHHHHHHHHH
Confidence            999998875       55 5899999999887655544421              22222 3222221 23789999998


Q ss_pred             ccC-CCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC
Q 015890          160 ETK-PTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       160 ~~~-~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~  234 (398)
                      +.. ..+++|++++ ++|++|.+. +++++++|.++|++||+++|+||+|  |++.|........+....+.|+||.++ 
T Consensus       228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~-  306 (457)
T 3tfu_A          228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALT-  306 (457)
T ss_dssp             HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-
T ss_pred             HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhh-
Confidence            721 1258888887 899999865 7888999999999999999999999  655554322211111111238899997 


Q ss_pred             Cc-ceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC--
Q 015890          235 MG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL--  306 (398)
Q Consensus       235 ~G-~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--  306 (398)
                      +| +|+||++++   +++++.+...     ....+++.|+++++++.++|+...+  ++..++.+++.+++++.|+++  
T Consensus       307 gG~~~lG~v~~~---~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l~~  381 (457)
T 3tfu_A          307 GGYLSLAATLCT---ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTARA  381 (457)
T ss_dssp             TTSSCCEEEEEE---HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGGGG
T ss_pred             CCCcceEEEEEc---HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhc
Confidence            55 699999999   8888888522     3345678899999999988874111  123444555555555555543  


Q ss_pred             -CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          307 -GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                       +.+....+. ++++++.++.. .+..++...++ ++||.++|.     .+++||+++. .+++++++++++|+++++++
T Consensus       382 ~~~v~~vr~~-G~~~~i~l~~~-~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~  453 (457)
T 3tfu_A          382 LPAVTDVRVC-GAIGVIECDRP-VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVARLV  453 (457)
T ss_dssp             STTEEEEEEC-SSCEEEEESSC-CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeeeeecC-CeEEEEEECCc-ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence             333334445 67777888653 25678888876 779999874     3789999776 68999999999999999875


Q ss_pred             h
Q 015890          385 V  385 (398)
Q Consensus       385 ~  385 (398)
                      .
T Consensus       454 ~  454 (457)
T 3tfu_A          454 G  454 (457)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=100.00  E-value=1.9e-31  Score=250.73  Aligned_cols=316  Identities=20%  Similarity=0.183  Sum_probs=215.3

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhc---C-CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVW---D-PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      ..++.+.+++..++.+.+++.+.+.   + ...+.|.  .+..+..+.+++.+.++++.+  +.++++++++++..++.+
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~   98 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYT--RLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLT   98 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBT--TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCcee--CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHH
Confidence            3577787777666555444444332   1 1123332  222344445555555545654  566666677999999999


Q ss_pred             hccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      ++++||+|+++.|+|+++...+    +..|.+++.+ +.+      |++++++.++++  +++|++++|+||||.+++  
T Consensus        99 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~--  167 (398)
T 2rfv_A           99 LCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-DAA------KPEEIRAAMRPE--TKVVYIETPANPTLSLVD--  167 (398)
T ss_dssp             HCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-CTT------SHHHHHHHCCTT--EEEEEEESSBTTTTBCCC--
T ss_pred             HhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHhcCCC--CeEEEEECCCCCCCcccC--
Confidence            9999999999999999887765    7889999988 553      799999999865  499999999999999999  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN  261 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~  261 (398)
                       +++|.++|+++|+++|+||+| ....+.+.   ..+.++++.|+||.++.+|.|+ ||++++   +++++ .+......
T Consensus       168 -l~~i~~l~~~~~~~li~De~~~~~~~~~~~---~~~~di~~~s~sK~~~~~g~~~~G~~~~~---~~~~~~~~~~~~~~  240 (398)
T 2rfv_A          168 -IETVAGIAHQQGALLVVDNTFMSPYCQQPL---QLGADIVVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKD  240 (398)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTCTTTCCGG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHH
T ss_pred             -HHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCcEEEEeCcccccCCCCceEEEEEEC---HHHHHHHHHHHHHh
Confidence             999999999999999999999 33322221   2246688999999998899998 999999   67766 56655554


Q ss_pred             C-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC--------------CCccccC---CccEEEEee
Q 015890          262 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAVKGG---EGAIYLWAR  323 (398)
Q Consensus       262 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~---~~~~~~~~~  323 (398)
                      . +.+.+++.++++.++++..    ....+...++.+.+.+.|++.+              .+.+..+   ..+.++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~  316 (398)
T 2rfv_A          241 ITGGCMSPFNAWLTLRGVKTL----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFE  316 (398)
T ss_dssp             TTCCCCCHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred             CCCCCCCHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence            4 5677888898888888752    3333444555555555555432              2222222   135566668


Q ss_pred             CCCCCCChHHHHHHHHHhc---CeEEecCCCCC-----------------------CCCeEEEEecC-CCHHHHHHHHHH
Q 015890          324 LPEKHLDDFEVVRWLAHRH---GVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADR  376 (398)
Q Consensus       324 ~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~  376 (398)
                      ++..    .+....++++.   |+.+.+|+.+.                       .++.||+|++. .++++++++.++
T Consensus       317 ~~~~----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a  392 (398)
T 2rfv_A          317 IAGG----LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHA  392 (398)
T ss_dssp             ETTH----HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             EcCC----HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Confidence            7631    22233344443   78888875431                       15799999998 455555555555


Q ss_pred             HH
Q 015890          377 LR  378 (398)
Q Consensus       377 l~  378 (398)
                      |+
T Consensus       393 l~  394 (398)
T 2rfv_A          393 IR  394 (398)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=100.00  E-value=1.3e-31  Score=255.89  Aligned_cols=338  Identities=16%  Similarity=0.094  Sum_probs=235.8

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      +|+.++||..|.  ++++ .+|++.+++.+++.+..   +... .+..+.++.+++.+.+.++.++++|++++|+++|++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~  124 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECAL  124 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHH
T ss_pred             CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence            567899998665  4443 38999999999986632   2121 344556777888887777777889999999999999


Q ss_pred             HHHHHhcc--------CCCEEEEeCCCCcChhh-HHHhcCc------------EEEEeccCCCC-C--C-CCC-------
Q 015890          104 NIVLTLCD--------AGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSSK-T--L-HPD-------  151 (398)
Q Consensus       104 ~~~~~l~~--------~gd~Vl~~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~~-~--~-~~d-------  151 (398)
                      .+++++..        ++|+|++.+|+|++... .+...|.            .+..+ +.+.. .  + .+|       
T Consensus       125 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~d~~~~~~~  203 (449)
T 3a8u_X          125 TAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHL-PHTLLASNAYSRGMPKEGGIA  203 (449)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEE-CCCCCGGGTTCSSSCSSSHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEe-cCCccccCccccCChHHHHHH
Confidence            99998764        67999999999988654 3443331            23333 33210 1  0 135       


Q ss_pred             -hHHHHHhhccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--cCCcEE
Q 015890          152 -ADWLEKTLETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--EGDHVV  223 (398)
Q Consensus       152 -~e~l~~~l~~~--~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--~~~~~i  223 (398)
                       +++|++.++..  ..+++|+++..+|+||. ..+++++++|.++|++||+++|+||+|  +++.+......  .-...+
T Consensus       204 ~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di  283 (449)
T 3a8u_X          204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDL  283 (449)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCE
Confidence             89999998731  22466666655678997 567999999999999999999999999  65544322111  111123


Q ss_pred             EEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh---------hccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  293 (398)
Q Consensus       224 ~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  293 (398)
                      +  |+||.++ +| +|+||++++   +++++.+...         ....+++.++++++++.++|+...+  ++..++++
T Consensus       284 ~--s~sK~l~-~G~~~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~  355 (449)
T 3a8u_X          284 M--CIAKQVT-NGAIPMGAVIAS---TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVA  355 (449)
T ss_dssp             E--EECGGGG-TTSSCCEEEEEE---HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHH
T ss_pred             E--EEccccc-CCCCceEEEEEC---HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence            3  8899998 57 999999998   7888888653         2234567788888888888874211  23455666


Q ss_pred             HHHHHHHHHhccCC---CCccccCCccEEEEeeCCCCCC----ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          294 RNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       294 ~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      ++.+++++.|++++   .+....+ .++++++.++....    +..++...|+ ++||.++++     .+++||+++. .
T Consensus       356 ~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRis~~~~~  428 (449)
T 3a8u_X          356 EVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG-----GDTLQFGPTFNS  428 (449)
T ss_dssp             HHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE-----TTEEEECCCTTC
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC-----CCEEEEECCCcC
Confidence            77777777776543   2111223 36788888875321    1236777776 789999986     2789999764 7


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015890          366 VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++++++++++|.++++++
T Consensus       429 t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          429 KPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             CHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=100.00  E-value=3.2e-30  Score=244.43  Aligned_cols=329  Identities=17%  Similarity=0.160  Sum_probs=238.8

Q ss_pred             cCCCeE--EcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAV--SLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~--~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|.+.+  +|+.|.|++++|+.+.+++.+.+...   .|+. ..+..++++.+++++.      .+++++++|+++++..
T Consensus        12 gg~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~------~~~v~~~~ggt~al~~   82 (424)
T 2po3_A           12 GGPAAFDQPLLVGRPNRIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG------VRHAVATCNATAGLQL   82 (424)
T ss_dssp             TCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT------SSEEEEESCHHHHHHH
T ss_pred             cCCccccccccccCCCCCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHH
Confidence            444444  68889999998999999998887642   3765 6778899999999983      2589999999999999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      ++.++. +||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.++++  +++|+++   ||||...+  
T Consensus        83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~---~~tG~~~~--  153 (424)
T 2po3_A           83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFA-DIDPDTGNLDPDQVAAAVTPR--TSAVVGV---HLWGRPCA--  153 (424)
T ss_dssp             HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTSSBCHHHHGGGCCTT--EEEEEEE---CGGGCCCC--
T ss_pred             HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhhCcC--CcEEEEE---CCCCCcCC--
Confidence            999985 78999999999999999999999999999 887666788999999999865  4888876   48999877  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                       +++|.++|+++|+++|+|++| +  .+++...... .+  +++.|+||..+++|.|+||++.++  +++++.+......
T Consensus       154 -l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~-~d--i~~~S~sk~K~l~~~~~G~~v~~~--~~l~~~l~~~~~~  227 (424)
T 2po3_A          154 -ADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSL-GD--AEVFSFHATKAVNAFEGGAVVTDD--ADLAARIRALHNF  227 (424)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECCTTSSSCCSSCEEEEESC--HHHHHHHHHHHBT
T ss_pred             -HHHHHHHHHHcCCEEEEECccccCCeECCeecccc-cC--EEEEeCCCCCCccCCCCeEEEeCC--HHHHHHHHHHHhc
Confidence             999999999999999999999 3  3444222111 22  888999855555668999999885  5777777655432


Q ss_pred             CC------------CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-CCcc----EEEEeeC
Q 015890          262 IP------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----IYLWARL  324 (398)
Q Consensus       262 ~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~----~~~~~~~  324 (398)
                      ..            +..+....+++...    .+.+++..++..++++++.+.|++++++.+.. +.++    .++++.+
T Consensus       228 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~  303 (424)
T 2po3_A          228 GFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI  303 (424)
T ss_dssp             TTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred             CccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence            11            11122222222222    23456677777788888999998875545554 3322    2344566


Q ss_pred             CCC--CCChHHHHHHHHHhcCeEEecCCCCC--------------CCCe-------EEEEecC-CCHHHHHHHHHHHHHH
Q 015890          325 PEK--HLDDFEVVRWLAHRHGVVVIPGGACG--------------CRGH-------LRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       325 ~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~~~~-------iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +..  ..+..++.+.| .++||.+.+.....              .++.       ||+++.. .+++++++++++|.++
T Consensus       304 ~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~  382 (424)
T 2po3_A          304 DEATTGIHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC  382 (424)
T ss_dssp             CHHHHSSCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence            520  12566777766 58999998732100              0112       7776445 7999999999999998


Q ss_pred             HHHHh
Q 015890          381 LEELV  385 (398)
Q Consensus       381 ~~~~~  385 (398)
                      +++..
T Consensus       383 ~~~~~  387 (424)
T 2po3_A          383 ATRGR  387 (424)
T ss_dssp             HHHHH
T ss_pred             HhhhH
Confidence            87653

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=100.00  E-value=1.4e-30  Score=246.45  Aligned_cols=354  Identities=12%  Similarity=0.073  Sum_probs=242.4

Q ss_pred             hccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhc
Q 015890           12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQEN   85 (398)
Q Consensus        12 ~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~   85 (398)
                      ...+...+..+.+......+.++|..+.+..  +|.+.+++.+.+.+.....|+      ......++++.+++.+.+.+
T Consensus         7 ~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~   84 (417)
T 3n0l_A            7 EMFDKEIFDLTNKELERQCEGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF   84 (417)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHHHHHhcCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence            3444455555543333335678887776554  899999999887443222332      22333566666666777777


Q ss_pred             CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh---HHHh--cCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890           86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQM--TGVTHILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus        86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                      +.++++|++++| ++++..++.+++++||+|+++.|+|+++..   .+..  .+..++.+ +.+ +++.+|+++|++.++
T Consensus        85 g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~i~  161 (417)
T 3n0l_A           85 NCKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFY-GVE-LDGRIDYEKVREIAK  161 (417)
T ss_dssp             TCSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEE-CCC-TTSSCCHHHHHHHHH
T ss_pred             CCCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEec-cCC-CCCCcCHHHHHHHHH
Confidence            887777887777 799999999999999999999999977544   2233  34566777 666 556789999999998


Q ss_pred             -cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          161 -TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       161 -~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                       +++  ++|++++|+|  |...+   +++|.++|++||+++|+||+|   +.+.+....... ..+++++|+||.+  +|
T Consensus       162 ~~~~--~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g  231 (417)
T 3n0l_A          162 KEKP--KLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTL--RG  231 (417)
T ss_dssp             HHCC--SEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTT--CS
T ss_pred             hcCC--eEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCcccc--CC
Confidence             454  8998887776  88888   999999999999999999997   333333222221 3458899999988  57


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG-  313 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-  313 (398)
                      +|+||+++++  +++++.+....... ..+++...++++..++.. ....+.+..++..++++++.+.|++.+. .+.. 
T Consensus       232 ~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~  308 (417)
T 3n0l_A          232 PRGGIIMTND--EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKF-KLVSD  308 (417)
T ss_dssp             CSCEEEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGG
T ss_pred             CCeeEEEECC--HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCc-eeccC
Confidence            8889999885  67777776654322 234455555555555554 3456678888888889999999988554 4443 


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC------CCCeEEEEecC-----CCHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~  382 (398)
                      +..++++|+.++....+..++... ++++||.+.++..+.      .++.+|+++..     .+++++++++++|.++++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~  387 (417)
T 3n0l_A          309 GTDNHLVLMSFLDREFSGKDADLA-LGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD  387 (417)
T ss_dssp             SCSSSEEEEECTTSSSCHHHHHHH-HHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEcccCCCCHHHHHHH-HHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence            334678888886443355566654 468999998765332      23579999753     357999999999999886


Q ss_pred             HH
Q 015890          383 EL  384 (398)
Q Consensus       383 ~~  384 (398)
                      +.
T Consensus       388 ~~  389 (417)
T 3n0l_A          388 DV  389 (417)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=100.00  E-value=7.5e-31  Score=251.20  Aligned_cols=334  Identities=11%  Similarity=0.060  Sum_probs=231.5

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      |..++||..+.++.+.++.+++++..    . ...|.+..+..++++++++++.      .+++++++|+++|+..++.+
T Consensus        41 ~~~ylD~~~~~~~~~~~~~~~~a~~~----~-~~~y~~~~~~~~l~~~la~~~~------~~~~~~~~~gt~a~~~al~~  109 (456)
T 2ez2_A           41 KDIYIDLLTDSGTNAMSDKQWAGMMM----G-DEAYAGSENFYHLERTVQELFG------FKHIVPTHQGRGAENLLSQL  109 (456)
T ss_dssp             GGCSEECSCSSSCCCCCHHHHHHHTT----C-CCCSSSCHHHHHHHHHHHHHHC------CSEEEEESSHHHHHHHHHHH
T ss_pred             ccceeeeccccCCccCCHHHHHHhhc----c-hhhcccChhHHHHHHHHHHHhC------CCcEEEeCCcHHHHHHHHHH
Confidence            34466666555555567788877752    1 2357677778899999999883      34799999999999999999


Q ss_pred             hccCCCEEEEeCCCC-cChhhHHHhcCcEEEEeccCCCC---------CCCCChHHHHHhhccCC--CCeEEEEeCCCC-
Q 015890          109 LCDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETKP--TPKLVSVVNPGN-  175 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~---------~~~~d~e~l~~~l~~~~--~~~~v~i~~p~n-  175 (398)
                      ++++||  +++.|+| ..+...++..|.+++.+ +.+++         ++.+|+++|++.+++++  .+++|++++|+| 
T Consensus       110 l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~  186 (456)
T 2ez2_A          110 AIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDI-VRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNL  186 (456)
T ss_dssp             HCCTTC--EEEESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTT
T ss_pred             hCCCCC--EeccccccchhHHHHHHcCCEEEEe-cccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCC
Confidence            999999  7889999 56678889999999988 76532         35789999999997542  248899999998 


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-----------cCCCccc-----cccCCcEEEEcccccccCCCcce
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-----------YDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-----------~~~~~~~-----~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      |||.+++.+++++|+++|++||+++|+||+| ++           +.+....     .....++++ .|++|..+ +| +
T Consensus       187 ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~-~S~kk~~~-~~-~  263 (456)
T 2ez2_A          187 AGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT-MSGKKDCL-VN-I  263 (456)
T ss_dssp             TTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE-EETTTTTC-CS-S
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE-EeCcccCC-CC-c
Confidence            9999999999999999999999999999999 53           3443211     112233444 47788765 56 7


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccC-----CCCcchHHHHH-HHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          239 VGYIAYPSEVEGFATQLLKVQDNI-----PICASIISQHL-ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      +||++.++  +++++.+.......     ..+.+.....+ +...++...   ++..++..++.+++.+.|++.+. .+.
T Consensus       264 gG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~-~~~  337 (456)
T 2ez2_A          264 GGFLCMND--DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAGV-PIV  337 (456)
T ss_dssp             CEEEEESC--HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTC-CBC
T ss_pred             eeEEEECC--HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCCC-ccc
Confidence            89999843  67877766543211     11223233333 333332211   23344445556677777766543 565


Q ss_pred             cCCccEEEEeeCCC--CCCChHHH-----HHHHHHhcCeEEec-CCCC------------CCCCeEEEEecC--CCHHHH
Q 015890          313 GGEGAIYLWARLPE--KHLDDFEV-----VRWLAHRHGVVVIP-GGAC------------GCRGHLRISFGG--LVEDDC  370 (398)
Q Consensus       313 ~~~~~~~~~~~~~~--~~~~~~~~-----~~~ll~~~gi~v~~-g~~~------------~~~~~iRi~~~~--~~~~~~  370 (398)
                      .+.+++++|+.+..  ...+..++     +.+|++++||.+.+ |..|            ...++|||+++.  .+++++
T Consensus       338 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i  417 (456)
T 2ez2_A          338 EPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHM  417 (456)
T ss_dssp             SSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHH
T ss_pred             cCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHH
Confidence            67678888887631  11233344     66665688998765 4322            124789999985  489999


Q ss_pred             HHHHHHHHHHHHHHh
Q 015890          371 KAAADRLRRGLEELV  385 (398)
Q Consensus       371 ~~~~~~l~~~~~~~~  385 (398)
                      ++++++|.+++++..
T Consensus       418 ~~~~~~l~~~l~~~~  432 (456)
T 2ez2_A          418 DVVADGIIKLYQHKE  432 (456)
T ss_dssp             HHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHhhhh
Confidence            999999999987754

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.98  E-value=8.5e-32  Score=255.63  Aligned_cols=336  Identities=13%  Similarity=0.081  Sum_probs=229.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ++++ .||++.+++.+++.+.....| +.....++++.+++++    + ..+++++++|++++++
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~-~~~~v~~~~~Gsea~~  123 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIERV----P-SIEIVRMVNSGTEATM  123 (429)
T ss_dssp             TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHS----T-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHHhC----C-CCCEEEEeCChHHHHH
Confidence            3578899999876  4555 589999999998876433333 4545556666666654    3 4789999999999999


Q ss_pred             HHHHHhcc--CCCEEEEeCCCCcChhhHHHhc-CcEEEEeccCCCC-CCC------------CChHHHHHhhccC-CCCe
Q 015890          104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GVTHILVGPCSSK-TLH------------PDADWLEKTLETK-PTPK  166 (398)
Q Consensus       104 ~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~------------~d~e~l~~~l~~~-~~~~  166 (398)
                      .+++.+..  ++++|++.+|+|+++...+... |.....+ ..+.. +..            -|+++|++.++.. ..++
T Consensus       124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~  202 (429)
T 3k28_A          124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATL-GLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIA  202 (429)
T ss_dssp             HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC------CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCccccc-CCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEE
Confidence            99988764  5689999999998766443222 2211111 11111 110            1789999998731 1246


Q ss_pred             EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       167 ~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +|+++.++|++|.+. +++++++|.++|++||+++|+||+|  + ..+........+....+.++||.++ +|+|+||++
T Consensus       203 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~  280 (429)
T 3k28_A          203 CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYG  280 (429)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TTSCCEEEE
T ss_pred             EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhc-CCCCeEEEE
Confidence            777776667777655 6888999999999999999999999  5 4442221111111222457899998 699999999


Q ss_pred             ccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCccccCCc
Q 015890          244 YPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEG  316 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~  316 (398)
                      ++   +++++.+....   ...+++.++++++++.++++..+   ++..+.++++++++.+.|++    .+.+....+. 
T Consensus       281 ~~---~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-  353 (429)
T 3k28_A          281 GK---AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRA-  353 (429)
T ss_dssp             EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-
T ss_pred             Ec---HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEee-
Confidence            98   78877765422   33467889999999999998643   45555566666666555543    4554444455 


Q ss_pred             cEEEEeeCCCCCC------------ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       317 ~~~~~~~~~~~~~------------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ++++++.+.....            ...+++..++ ++||.+.|+.    .+.+|+++. .+++++++++++|.++++++
T Consensus       354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~  427 (429)
T 3k28_A          354 GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ----FEGLFLSTV-HSDADIEATIAAAEIAMSKL  427 (429)
T ss_dssp             TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred             ccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC----CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence            6666666643211            1256667665 7899999863    467888776 48999999999999998764

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.98  E-value=6.1e-30  Score=244.39  Aligned_cols=356  Identities=12%  Similarity=-0.009  Sum_probs=253.1

Q ss_pred             hHHHHHHHHH-HcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc----
Q 015890           17 PIMVQIQELV-RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS----   91 (398)
Q Consensus        17 ~~~~~~~~~~-~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~----   91 (398)
                      ..++.+.+.. .++....+.....+ ...+|.+.+++.+++... ...|...++..++++.+.+++.+++|.+.++    
T Consensus        27 ~v~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~  104 (452)
T 2dgk_A           27 VAFQIINDELYLDGNARQNLATFCQ-TWDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQA  104 (452)
T ss_dssp             HHHHHHHHHGGGSCCCTTBCSCCSC-CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred             HHHHHHHHHhcCCCCCccCCCCeeC-CCchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCC
Confidence            3455555554 34443444444333 345689999998887653 3446566777889999999999999987665    


Q ss_pred             -EEEecChHHHHHHHHHHhcc--------CC-----CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890           92 -VMVTAGANQAFVNIVLTLCD--------AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        92 -v~~~~g~t~a~~~~~~~l~~--------~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                       +++++|+|+++..++.++..        +|     ++|+++. +|..+...++..|++++.+ +.+++++.+|+++|++
T Consensus       105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~  182 (452)
T 2dgk_A          105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIE  182 (452)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHH
T ss_pred             ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEE-ecCCCCCeECHHHHHH
Confidence             99999999999999988764        55     5899999 9999999999999999999 8765457899999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEeece--ecc---CCC-ccccccCCcEEEE
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTY--FMY---DGR-KHCCVEGDHVVNL  225 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~------~~~livDe~~--~~~---~~~-~~~~~~~~~~i~~  225 (398)
                      ++++++  ++|++++|+||||.+.+   +++|.++|+++      |+++++|++|  +..   .+. .......+.+.++
T Consensus       183 ~i~~~t--~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~  257 (452)
T 2dgk_A          183 ACDENT--IGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSIS  257 (452)
T ss_dssp             HCCTTE--EEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEE
T ss_pred             HHhhCC--EEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEE
Confidence            998765  89999999999999998   89999999995      9999999999  221   221 1111122445678


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHH-HHHHHhhccC---------CCCc---chHHHHHHHHHhcCCchHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFA-TQLLKVQDNI---------PICA---SIISQHLALYSLQTGPEWVTERVKDL  292 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~-~~l~~~~~~~---------~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~  292 (398)
                      .|.+|++ .+|+++|++++++  +.++ +.+.......         .++.   ....++++...+.  .+.+++..++.
T Consensus       258 ~~~hK~~-~~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--~~g~~~~~~~~  332 (452)
T 2dgk_A          258 ASGHKFG-LAPLGCGWVIWRD--EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--REGYTKVQNAS  332 (452)
T ss_dssp             EETTTTT-CCCSSCEEEEESS--GGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred             ECccccc-CCCCCeEEEEEcC--HHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--HHHHHHHHHHH
Confidence            8999955 5788999999875  3322 3221101100         1121   3334444444442  45678888899


Q ss_pred             HHHHHHHHHHhccCCCCccccC----CccEEEEeeCCCCC---CChHHHHHHHHHhcCeEEecCCC---CCCCCeEEEEe
Q 015890          293 VRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISF  362 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~  362 (398)
                      .++++++.+.|++.+.+.+..+    ...+++.+.++...   .+..++.+.|. ++||.++....   ....+++|+++
T Consensus       333 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~  411 (452)
T 2dgk_A          333 YQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMC  411 (452)
T ss_dssp             HHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEe
Confidence            9999999999999876566543    33566767765321   13477888775 78996543211   12345899999


Q ss_pred             cC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          363 GG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       363 ~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +. .++++++++++.|+++++.+.+.
T Consensus       412 ~~~~t~e~id~li~~l~~~~~~~~~~  437 (452)
T 2dgk_A          412 RRGFEMDFAELLLEDYKASLKYLSDH  437 (452)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            98 78899999999999998887654

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.98  E-value=5.9e-31  Score=252.67  Aligned_cols=324  Identities=15%  Similarity=0.131  Sum_probs=224.2

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhcc----CCCE---EEE
Q 015890           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AGDS---VVM  118 (398)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~----~gd~---Vl~  118 (398)
                      +.+.+++.+.+... ...|.+..+..++++.+++++.      .+++++|+|+++|++.++.++++    +||+   |++
T Consensus        55 ~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv  127 (467)
T 1ax4_A           55 NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELFN------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFI  127 (467)
T ss_dssp             CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHHC------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHcC------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEE
Confidence            67777777766543 3467677778889999999883      36899999999999999999988    9998   999


Q ss_pred             eCCCCcChhhHHHhcCcEEEEeccCCC---------CCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHHH
Q 015890          119 FAPYYFNSYMSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERLL  186 (398)
Q Consensus       119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt-G~~~~~~~l  186 (398)
                      +.+.|..+...+...|.+++.+ +.+.         .++.+|+++|++.+++.  ..+++|++++|+||+ |.+++.+++
T Consensus       128 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l  206 (467)
T 1ax4_A          128 SNFHFDTTAAHVELNGCKAINI-VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNL  206 (467)
T ss_dssp             ESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred             eccccchhhHHHhccCCceecc-cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHH
Confidence            8555556677788889888776 4321         13468999999999742  125999999999999 899999999


Q ss_pred             HHHHHHHHHcCCEEEEeece-e-----------ccCCCcccccc----CCcEEEEcccccccCCC-cceeEEEEccCCcH
Q 015890          187 KRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSEVE  249 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~~~----~~~~i~~~s~sK~~~~~-G~r~G~i~~~~~~~  249 (398)
                      ++|+++|++||+++|+|+++ +           .+.+.......    ...++++.|+||.+|++ |   |+++.++  +
T Consensus       207 ~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d--~  281 (467)
T 1ax4_A          207 KEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRD--N  281 (467)
T ss_dssp             HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESS--C
T ss_pred             HHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCC--H
Confidence            99999999999999999987 4           34343221110    01125668999999765 3   6777664  4


Q ss_pred             -HHHHHHHHhhcc----CCC-CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEee
Q 015890          250 -GFATQLLKVQDN----IPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR  323 (398)
Q Consensus       250 -~~~~~l~~~~~~----~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  323 (398)
                       ++++.+......    ..+ +.+...+.++..+++...+  ++..+...++++.+.+.|++.+ +.+..+.+++++|+.
T Consensus       282 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~  358 (467)
T 1ax4_A          282 EEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREAG-IPIQYPTGGHAVFVD  358 (467)
T ss_dssp             HHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTT-CCBCSSCCSSEEEEE
T ss_pred             HHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhCC-CCcccCCCceEEEEe
Confidence             666666543321    112 2333333433334543211  1122233355667777776643 355567778899988


Q ss_pred             -------CCCCCCChHHHHHHHHHhcCeEEec-CCCC-C-----------CCCeEEEEecC--CCHHHHHHHHHHHHHHH
Q 015890          324 -------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-G-----------CRGHLRISFGG--LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       324 -------~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~-~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~~~~  381 (398)
                             ++....+..+++.+|+.++||.+.+ |..+ +           ..+++||+++.  .+++++++++++|.+++
T Consensus       359 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~  438 (467)
T 1ax4_A          359 CKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLK  438 (467)
T ss_dssp             STTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred             hhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence                   3321124567888775689999998 5432 1           13789999983  68999999999999998


Q ss_pred             HHHh
Q 015890          382 EELV  385 (398)
Q Consensus       382 ~~~~  385 (398)
                      ++..
T Consensus       439 ~~~~  442 (467)
T 1ax4_A          439 EKFA  442 (467)
T ss_dssp             HHHT
T ss_pred             Hhhh
Confidence            8753

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2e-30  Score=250.88  Aligned_cols=326  Identities=11%  Similarity=0.020  Sum_probs=243.4

Q ss_pred             CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc-----CC
Q 015890           44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD-----AG  113 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~-----~g  113 (398)
                      .++.+.+++.+.+...   ....|...++..++++.+.+++.+.+|.+  ++++++++|+++++..++.++++     +|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g  155 (497)
T 3mc6_A           76 GGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRG  155 (497)
T ss_dssp             CCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCC
Confidence            4577777777766431   23345556677889999999999999987  67899999999999999999864     56


Q ss_pred             ---CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          114 ---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       114 ---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                         |+|+++.++|.++...++..|++++.+ +.+++++.+|+++|++++++++  ++|++++|+||||.+.+   +++|.
T Consensus       156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~---l~~i~  229 (497)
T 3mc6_A          156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHV-ELDPTTYQVDLGKVKKFINKNT--VLLVGSAPNFPHGIADD---IEGLG  229 (497)
T ss_dssp             CSSCEEEEETTSCHHHHHHHHHSCCEEEEE-CBCTTTCSBCTTTTGGGCCSSE--EEEEEETTCTTTCCCCS---CTTTT
T ss_pred             CCCceEEEeCCccHHHHHHHHHcCCeEEEE-ecCcccCcCCHHHHHHHHhhCC--EEEEEECCCCCCCcCCC---HHHHH
Confidence               899999999999999999999999999 8776456889999999998764  99999999999999999   88999


Q ss_pred             HHHHHcCCEEEEeece--ec--cC---C---C-ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015890          191 DLCKAAGSWLVVDNTY--FM--YD---G---R-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       191 ~l~~~~~~~livDe~~--~~--~~---~---~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                      ++|+++|+++|+|++|  +.  +.   +   . +......+.++++.|++|.++ +|.++|++++++   +.+.......
T Consensus       230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~~  305 (497)
T 3mc6_A          230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRN---SDLRMHQYYV  305 (497)
T ss_dssp             THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSS---HHHHTTTSCC
T ss_pred             HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcC-CCCCceeEEecC---HHHHhhhhcc
Confidence            9999999999999999  22  11   1   1 112222345688889999874 678899999884   3333221110


Q ss_pred             -ccC----------CCCcc---hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeC
Q 015890          260 -DNI----------PICAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARL  324 (398)
Q Consensus       260 -~~~----------~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~  324 (398)
                       ..+          ..+.+   ..+++++...+.  ...+++..++..++++++.+.|++ ++++.+..+..++++++..
T Consensus       306 ~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~  383 (497)
T 3mc6_A          306 NPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSS  383 (497)
T ss_dssp             BTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEEC
T ss_pred             cccccCCCcCCcCcccCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeC
Confidence             000          00111   233444444443  355678888889999999999998 5666766544455666665


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhcc
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +.  .+..++.+.|. ++||.+.++.   .+..+|++++..+.+++++++++|.++++++.+.
T Consensus       384 ~~--~~~~~l~~~L~-~~Gi~v~~~~---~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~  440 (497)
T 3mc6_A          384 KT--LNIHELSDRLS-KKGWHFNALQ---KPVALHMAFTRLSAHVVDEICDILRTTVQELKSE  440 (497)
T ss_dssp             TT--TTHHHHHHHHH-TTTCBCEECC---SSCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred             CC--CCHHHHHHHHH-hCCEEEecCC---CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            42  35778888775 7899987754   3457899988778899999999999999887653

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.98  E-value=2e-31  Score=253.83  Aligned_cols=327  Identities=17%  Similarity=0.128  Sum_probs=229.8

Q ss_pred             CCeEEcCCc-cCCCCCcHHHHHHHHHh---hcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           30 KNAVSLAQG-VVYWQPPKMAMEKVKEL---VWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        30 ~~~~~l~~g-~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      .+++.|+.| ++..+.|+.+.++....   ......+.|+ ..+.+ .++++++++.++++.+  ++++++|+++++..+
T Consensus        89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~  164 (464)
T 1ibj_A           89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKAD--RAFCFTSGMAALSAV  164 (464)
T ss_dssp             HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH
T ss_pred             CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHH
Confidence            457888887 67777788887776543   1122345675 34444 7888999888888754  777788888999988


Q ss_pred             HHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          106 VLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       106 ~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      +. ++++||+|+++.|+|+++...    ++..|.+++.+ +.+      |++++++.++++  +++|++++|+||||.++
T Consensus       165 l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~------d~~~l~~~i~~~--tk~v~l~~p~NptG~v~  234 (464)
T 1ibj_A          165 TH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NTT------KLDEVAAAIGPQ--TKLVWLESPTNPRQQIS  234 (464)
T ss_dssp             HT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CTT------SHHHHHHHCCSS--EEEEEECSSCTTTCCCC
T ss_pred             HH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHHhccC--ceEEEEeCCCCCCCEee
Confidence            85 778999999999999888653    46679999988 553      789999999865  49999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhh
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQ  259 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~  259 (398)
                      +   +++|+++|+++|+++|+||+| .+...   .....+.++++.|+||.++. +|+++||+++++  +++++.+....
T Consensus       235 ~---l~~i~~la~~~gi~livDea~~~g~~~---~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~--~~l~~~l~~~~  306 (464)
T 1ibj_A          235 D---IRKISEMAHAQGALVLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQ  306 (464)
T ss_dssp             C---HHHHHHHHHTTTCEEEEECTTTCTTTC---CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECS--HHHHHHHHHHH
T ss_pred             c---HHHHHHHHHHcCCEEEEECCCcccccC---ChhhcCCEEEEECCcccccCCCCCcEEEEEECh--HHHHHHHHHHH
Confidence            8   999999999999999999999 43211   11123567999999999864 488999999985  47778777666


Q ss_pred             ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH----------HHhccCCCCccccCC---ccEEEEeeCCC
Q 015890          260 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR----------EALSPLGEGAVKGGE---GAIYLWARLPE  326 (398)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----------~~l~~~~~~~~~~~~---~~~~~~~~~~~  326 (398)
                      .....+.+++.++++..+++.....+++..+......+.+.          +.|++++.+.+..++   .+.++++.++.
T Consensus       307 ~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~  386 (464)
T 1ibj_A          307 NSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS  386 (464)
T ss_dssp             HHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred             HhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence            44556677888888888876422222222222222223332          223333333444333   24577778742


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCC------------CC----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGG------------AC----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~------------~~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                       ......+++.| +..||.++.|.            .+          + .+++||++++.   +++++++++|++++++
T Consensus       387 -~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~  461 (464)
T 1ibj_A          387 -VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT  461 (464)
T ss_dssp             -HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred             -HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence             11123455554 35788888875            11          1 15789999996   8899999999988764

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.98  E-value=3.2e-30  Score=242.07  Aligned_cols=319  Identities=15%  Similarity=0.102  Sum_probs=235.9

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-  109 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-  109 (398)
                      ++++|+.  +.  .|+++++++.+.+.+.   .|.+..+..++++.+++++    +.  +++++++|+++|+..++.++ 
T Consensus         9 ~~i~~~~--p~--~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~al~~~~~~~~   75 (393)
T 1mdo_A            9 DFLPFSR--PA--MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLT----GN--QYAVAVSSATAGMHIALMALG   75 (393)
T ss_dssp             CCBCSCC--CC--CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTT
T ss_pred             cccccCC--CC--CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHh----CC--CcEEEecChHHHHHHHHHHcC
Confidence            4677775  44  4578889998887653   2335567788999999988    33  47999999999999999999 


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.++++  +++|+++   ||||...+   +++|
T Consensus        76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~--~~~v~~~---~~~G~~~~---~~~i  146 (393)
T 1mdo_A           76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQ--TKAIIPV---HYAGAPAD---LDAI  146 (393)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTT--EEEECCB---CGGGCCCC---HHHH
T ss_pred             CCCCCEEEeCCCccHhHHHHHHHCCCEEEEE-eccCCcCCCCHHHHHHhcCCC--ceEEEEe---CCCCCcCC---HHHH
Confidence            8999999999999999999999999999999 887766789999999999864  4888875   48999988   9999


Q ss_pred             HHHHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015890          190 SDLCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-  263 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~-  263 (398)
                      .++|+++|+++|+|++| .+  +.+.+...    .++++.|+|  |.++  |.++||++.++  +++++.+........ 
T Consensus       147 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~----~d~~~~S~~k~K~l~--~~~~g~~~~~~--~~~~~~l~~~~~~~~~  218 (393)
T 1mdo_A          147 YALGERYGIPVIEDAAHATGTSYKGRHIGA----RGTAIFSFHAIKNIT--CAEGGIVVTDN--PQFADKLRSLKFHGLG  218 (393)
T ss_dssp             HHHHHHHTCCBCEECTTCTTCEETTEETTS----SSEEEEECCTTSSSC--SSSCEEEEESC--HHHHHHHHHHTBTTEE
T ss_pred             HHHHHHcCCeEEEECccccCCeECCeecCC----CCeEEEeCCCCCccc--cccceEEEeCC--HHHHHHHHHHHhcCCc
Confidence            99999999999999999 32  33322111    568889999  7664  45899999864  677777765432110 


Q ss_pred             -----------------------CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-C-----
Q 015890          264 -----------------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----  314 (398)
Q Consensus       264 -----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-----  314 (398)
                                             +..+....+++...++.    +++..++.+++++++.+.|++.+ +++.. +     
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~  293 (393)
T 1mdo_A          219 VDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHI  293 (393)
T ss_dssp             CC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEE
T ss_pred             ccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCC
Confidence                                   11244444443444432    45566666778888889998877 45432 2     


Q ss_pred             CccEEEEeeCCCC--CCChHHHHHHHHHhcCeEEecCCCC--------------CC-------CCeEEEEecC-CCHHHH
Q 015890          315 EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGAC--------------GC-------RGHLRISFGG-LVEDDC  370 (398)
Q Consensus       315 ~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~~g~~~--------------~~-------~~~iRi~~~~-~~~~~~  370 (398)
                      .+++++++.++..  ..+..++.+.|. ++||.++++..+              ..       ...+|++++. .+++|+
T Consensus       294 ~~~~~~~v~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i  372 (393)
T 1mdo_A          294 HAWHLFIIRVDEARCGITRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDF  372 (393)
T ss_dssp             CCCSCEEEECCHHHHSSCHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHH
T ss_pred             ceeEEEEEEecccccccCHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHH
Confidence            3345788888630  135777888775 789999988754              11       2479999986 789999


Q ss_pred             HHHHHHHHHHHHHHh
Q 015890          371 KAAADRLRRGLEELV  385 (398)
Q Consensus       371 ~~~~~~l~~~~~~~~  385 (398)
                      ++++++|+++++...
T Consensus       373 ~~~~~~l~~~~~~~~  387 (393)
T 1mdo_A          373 DRVITALHQIAGQGS  387 (393)
T ss_dssp             HHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999998876543

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.98  E-value=9.3e-30  Score=241.30  Aligned_cols=359  Identities=16%  Similarity=0.136  Sum_probs=231.6

Q ss_pred             hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-----CC-CCcHHHHHHHHHHH
Q 015890            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-----AD-EGLPELRDALVKKL   81 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-----~~-~~~~~~~~~l~~~l   81 (398)
                      +.++...+........+......+.++|..+.+..  ||.+++++.+.+.+....+|+     .. .....+++...+.+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   87 (425)
T 3ecd_A           10 SQSLAERDASVRGAILKELERQQSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERV   87 (425)
T ss_dssp             HCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHH
T ss_pred             HHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHH
Confidence            44444444444444433333334678887776654  899999999988542212221     11 11123333333555


Q ss_pred             hhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcC---hhhHHHhcCc--EEEEeccCCCCCCCCChHHHH
Q 015890           82 NQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGV--THILVGPCSSKTLHPDADWLE  156 (398)
Q Consensus        82 ~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~e~l~  156 (398)
                      .+.++.+.. .++++|+++++..++.+++++||+|+++.|+|++   +.......|.  +++.+ +.+.+++.+|+++|+
T Consensus        88 ~~~~~~~~~-~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~  165 (425)
T 3ecd_A           88 KRLFNAGHA-NVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQY-GVSRDTMLIDYDQVE  165 (425)
T ss_dssp             HHHHTCSEE-ECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEE-CCCTTTSSCCHHHHH
T ss_pred             HHHhCCCCc-eeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeec-CCCcccCccCHHHHH
Confidence            555566542 3458888899999999999999999999999987   2222223343  66666 666566788999999


Q ss_pred             Hhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEccccccc
Q 015890          157 KTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       157 ~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~  232 (398)
                      +.++ ++  +++|++++|+||  ...+   +++|.++|++||+++|+||+|   +.+.+........ .+++++|+||++
T Consensus       166 ~~i~~~~--~~~v~~~~~~~~--~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-~di~~~s~sK~l  237 (425)
T 3ecd_A          166 ALAQQHK--PSLIIAGFSAYP--RKLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-AHVVTSTTHKTL  237 (425)
T ss_dssp             HHHHHHC--CSEEEEECSCCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSGGG
T ss_pred             HHHhhcC--CcEEEEccccCC--CcCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-CcEEEecCCccc
Confidence            9997 44  499999989886  4455   899999999999999999996   3344433222221 348899999998


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccC-CCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                        +|+|+||++.++  +.+.+.+....... ..+.+...+.++..++.. ..+++++..+++.++++++.+.|++.+. .
T Consensus       238 --~g~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~  312 (425)
T 3ecd_A          238 --RGPRGGFVLTND--EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-D  312 (425)
T ss_dssp             --CCCSCEEEEESC--HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-E
T ss_pred             --CCCCcEEEEeCC--HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-e
Confidence              577899999885  56767666544322 223445455555545433 3456778888889999999999988665 5


Q ss_pred             cccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHH
Q 015890          311 VKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLR  378 (398)
Q Consensus       311 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~  378 (398)
                      +..+ ..++++|+.++....+...+...| +++||.+.++..+      ..++.+|++++.     .+++++++++++|.
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~  391 (425)
T 3ecd_A          313 LVTGGTDNHLLLVDLRPKGLKGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLIL  391 (425)
T ss_dssp             EGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHH
T ss_pred             eccCCCCceEEEEEeCCCCCCHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHH
Confidence            5443 357888888864333455555555 6889999943321      124689999443     34799999999999


Q ss_pred             HHHHHH
Q 015890          379 RGLEEL  384 (398)
Q Consensus       379 ~~~~~~  384 (398)
                      +++++.
T Consensus       392 ~~l~~~  397 (425)
T 3ecd_A          392 EVFEAL  397 (425)
T ss_dssp             HHHHHH
T ss_pred             HHHhcc
Confidence            998876

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.97  E-value=1.5e-29  Score=239.35  Aligned_cols=326  Identities=14%  Similarity=0.130  Sum_probs=230.8

Q ss_pred             CccCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCC
Q 015890           37 QGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGD  114 (398)
Q Consensus        37 ~g~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd  114 (398)
                      .|.+..+ .++++++++.+.+.+.....|++..|..++++.+++.+.+.++.+  ++++++|+++++..++.++ +++||
T Consensus         6 ~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd   83 (418)
T 2c81_A            6 DHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD   83 (418)
T ss_dssp             --CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence            3455554 479999999998876433347666676666666666666666765  5677888899999999999 89999


Q ss_pred             EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015890          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK  194 (398)
Q Consensus       115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~  194 (398)
                      +|+++.|+|+++...++..|++++.+ +.+++++.+|++.|++.++++  +++|+++   ||||...+   +++|.++|+
T Consensus        84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~---~~~G~~~~---~~~i~~~~~  154 (418)
T 2c81_A           84 EVIVPSLTWIATATAVLNVNALPVFV-DVEADTYCIDPQLIKSAITDK--TKAIIPV---HLFGSMAN---MDEINEIAQ  154 (418)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHGGGCCTT--EEEECCB---CCTTCCCC---HHHHHHHHH
T ss_pred             EEEECCCccHhHHHHHHHcCCEEEEE-ecCCCCCCcCHHHHHHhhCCC--CeEEEEe---CCcCCccc---HHHHHHHHH
Confidence            99999999999999999999999999 887656789999999999865  4888764   58999887   999999999


Q ss_pred             HcCCEEEEeece--ec-cCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC------
Q 015890          195 AAGSWLVVDNTY--FM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP------  263 (398)
Q Consensus       195 ~~~~~livDe~~--~~-~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~------  263 (398)
                      ++|+++|+|++|  +. +++...... .+  +++.|+  ||.+++ | ++||++.++  +++++.+........      
T Consensus       155 ~~~~~li~D~a~~~~~~~~~~~~~~~-~~--~~~~s~s~~K~~~~-g-~~g~~~~~~--~~l~~~~~~~~~~~~~~~~~~  227 (418)
T 2c81_A          155 EHNLFVIEDCAQSHGSVWNNQRAGTI-GD--IGAFSCQQGKVLTA-G-EGGIIVTKN--PRLFELIQQLRADSRVYCDDS  227 (418)
T ss_dssp             HTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECCTTSSSCS-S-SCEEEEESC--HHHHHHHHHHHBTTEEECSCG
T ss_pred             HCCCEEEEECcccccCccCCEecccc-cc--eEEEeccCCcccCC-C-CeEEEEECC--HHHHHHHHHHHHhCccccccc
Confidence            999999999999  32 444222211 22  556666  999985 7 999999864  677777765432110      


Q ss_pred             ------CC--c-----------chHHHHHH-HHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCc-cE---
Q 015890          264 ------IC--A-----------SIISQHLA-LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-AI---  318 (398)
Q Consensus       264 ------~~--~-----------~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~-~~---  318 (398)
                            +.  .           -...++++ ...++    .+++..++.+++++++.+.|++++++.+. .+.+ +.   
T Consensus       228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~  303 (418)
T 2c81_A          228 SELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY  303 (418)
T ss_dssp             GGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred             cccccchhhccccccccCcCCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence                  11  0           01122221 12222    25666677777888899999887655665 3443 22   


Q ss_pred             -EEEeeCCC---CCCChHHHHHHHHHhcCeE---EecCCCCC---------------------------C---------C
Q 015890          319 -YLWARLPE---KHLDDFEVVRWLAHRHGVV---VIPGGACG---------------------------C---------R  355 (398)
Q Consensus       319 -~~~~~~~~---~~~~~~~~~~~ll~~~gi~---v~~g~~~~---------------------------~---------~  355 (398)
                       .+.+.++.   ...+..++.+.|.+++||.   +.++..+.                           .         .
T Consensus       304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (418)
T 2c81_A          304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG  383 (418)
T ss_dssp             SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred             EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence             22256653   1236778888886433999   88875220                           0         1


Q ss_pred             CeEEEEecC-C-CHHHHHHHHHHHHHHHHHH
Q 015890          356 GHLRISFGG-L-VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       356 ~~iRi~~~~-~-~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.||++++. . +++|++++++.|+++++++
T Consensus       384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~  414 (418)
T 2c81_A          384 QSIVIHHAILLAEPSHLSLLVDAVAELARKF  414 (418)
T ss_dssp             HEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence            479999987 7 8999999999999888754

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.97  E-value=2e-30  Score=246.06  Aligned_cols=332  Identities=14%  Similarity=0.100  Sum_probs=227.3

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ++++ .+|++.+++.+++.+...  |..   ..+.+.++++++.+.++ ++++|++++|++++++
T Consensus        49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~  122 (427)
T 3fq8_A           49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACM  122 (427)
T ss_dssp             TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            4678899999886  4454 599999999999876422  322   35677777777777766 6789999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-E-------------------EEEeccCCCCCCCCChHHHHHhhcc
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-T-------------------HILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-~-------------------~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      .+++...  ..+++|++..|+|+++...+...+. .                   +..+ +.      -|+++|++.+++
T Consensus       123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~  195 (427)
T 3fq8_A          123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-PY------NDLEAVKALFAE  195 (427)
T ss_dssp             HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE-ET------TCHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec-CC------CCHHHHHHHHHh
Confidence            9996543  3457999999999886543322211 1                   1111 11      189999999975


Q ss_pred             C-CCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc
Q 015890          162 K-PTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       162 ~-~~~~~v~i~~p~nptG~~~~-~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  237 (398)
                      . ..+++|+++.++|++|.+.+ ++++++|.++|++||+++|+||+|  + ..+........+....+.|+||.++ +|+
T Consensus       196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~  273 (427)
T 3fq8_A          196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIG-GGL  273 (427)
T ss_dssp             STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGG-TTS
T ss_pred             CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhh-CCc
Confidence            3 22578888877888887665 666999999999999999999999  5 3332221111122222458899998 899


Q ss_pred             eeEEEEccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          238 RVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+||++++   +++++.+...   ....+++.++++++++.++++.  .++..++..+.....++.+.+.+...+.....
T Consensus       274 ~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  350 (427)
T 3fq8_A          274 PVGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACG  350 (427)
T ss_dssp             SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred             ceEEEEEc---HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            99999998   7888776542   1334567789999999988864  12344444444444455555555445543333


Q ss_pred             cCCccEEEEeeCCCCCCC------------hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKHLD------------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      .+. ++++++.+......            ..++...++ ++||.++++..    ..+|+++. .+++++++++++|.++
T Consensus       351 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~----~r~~~~~~-~t~e~i~~~l~~l~~~  423 (427)
T 3fq8_A          351 GQV-SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAARTV  423 (427)
T ss_dssp             EEE-TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHHHH
T ss_pred             EEe-eeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC----CCEEeeCc-CCHHHHHHHHHHHHHH
Confidence            333 77788887543211            246777665 78999998752    34555544 5899999999999998


Q ss_pred             HHH
Q 015890          381 LEE  383 (398)
Q Consensus       381 ~~~  383 (398)
                      +++
T Consensus       424 l~~  426 (427)
T 3fq8_A          424 MSA  426 (427)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=1.4e-30  Score=246.30  Aligned_cols=329  Identities=12%  Similarity=0.069  Sum_probs=234.7

Q ss_pred             HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC----CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~----~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      +...++.+.|+.+.+. +.|+.+.+++.+.+.+.. ..+..    ..+..+..+.+.+.+.++++.++++|++++|++++
T Consensus        23 f~~~~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a  100 (416)
T 1qz9_A           23 FALPEGVIYLDGNSLG-ARPVAALARAQAVIAEEW-GNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSIN  100 (416)
T ss_dssp             BCCCTTCEECCTTTSC-CCBTTHHHHHHHHHHTCC-CCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHH
T ss_pred             CCCCCCeEeecCCCcC-CCcHHHHHHHHHHHHHHH-hccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHH
Confidence            3333567888877766 568899999999886521 11110    11333455566666666678888899999999999


Q ss_pred             HHHHHHHhc------cCCCEEEEe-CCCCcChhhH----HHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890          102 FVNIVLTLC------DAGDSVVMF-APYYFNSYMS----FQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       102 ~~~~~~~l~------~~gd~Vl~~-~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      +..++.+++      ++||+|++. .++|+.+...    .+..  |++++.+ +.        +++|++.++++  +++|
T Consensus       101 l~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--------~~~l~~~i~~~--~~~v  169 (416)
T 1qz9_A          101 LFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLV-DS--------PEELPQAIDQD--TAVV  169 (416)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEE-SS--------GGGHHHHCSTT--EEEE
T ss_pred             HHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEe-Cc--------HHHHHHHhCCC--ceEE
Confidence            998888876      889875554 4566544433    2333  8898888 54        78899998764  5999


Q ss_pred             EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCccee-EEEEccC
Q 015890          169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPS  246 (398)
Q Consensus       169 ~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~  246 (398)
                      ++++|+||||.+.+   +++|.++|+++|+++|+|++| ++.....  ....+.++++.|++|+++ +|.++ |+++++ 
T Consensus       170 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~~~~d~~~~s~~K~l~-~g~~~~g~l~~~-  242 (416)
T 1qz9_A          170 MLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAVPVD--LHQAGADYAIGCTYKYLN-GGPGSQAFVWVS-  242 (416)
T ss_dssp             EEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCCC--HHHHTCSEEEECSSSTTC-CCTTCCCEEEEC-
T ss_pred             EEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccCcCCC--hhhcCCCEEEecCcccCC-CCCCCeEEEEEC-
Confidence            99999999999999   899999999999999999999 5432211  111234588899999984 67777 999998 


Q ss_pred             CcHHHHHHHHHhh-----------------------ccCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHH
Q 015890          247 EVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       247 ~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~  302 (398)
                        +++++.+....                       ....++.+...+.++.++++.. ..++++..+++.++++++.+.
T Consensus       243 --~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  320 (416)
T 1qz9_A          243 --PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIEL  320 (416)
T ss_dssp             --TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence              45544443211                       1123356777777777777642 235677888888888998888


Q ss_pred             hccC-C--CCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec--CCCHHHHHHH
Q 015890          303 LSPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG--GLVEDDCKAA  373 (398)
Q Consensus       303 l~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~~~~~~  373 (398)
                      |++. +  ++.+..+.    .++++++.++.    ..++.+.|. ++||.+..    ..++++|++++  ..++++++++
T Consensus       321 L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~gi~~~~----~~~~~lRis~~~~~~t~~~i~~~  391 (416)
T 1qz9_A          321 VEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALI-DRGVIGDY----REPRIMRFGFTPLYTTFTEVWDA  391 (416)
T ss_dssp             HHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHH-TTTEECEE----ETTTEEEEECCTTTCCHHHHHHH
T ss_pred             HHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHH-hCCcEecc----CCCCeEEEeCcccCCCHHHHHHH
Confidence            8775 3  34555543    25678888863    567888775 78998854    24689999997  3789999999


Q ss_pred             HHHHHHHHHHHh
Q 015890          374 ADRLRRGLEELV  385 (398)
Q Consensus       374 ~~~l~~~~~~~~  385 (398)
                      +++|.+++++..
T Consensus       392 ~~~l~~~~~~~~  403 (416)
T 1qz9_A          392 VQILGEILDRKT  403 (416)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHhccc
Confidence            999999988754

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.97  E-value=7.8e-30  Score=243.13  Aligned_cols=358  Identities=15%  Similarity=0.121  Sum_probs=241.6

Q ss_pred             HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHH--HHHH-HHHh
Q 015890            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELR--DALV-KKLN   82 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~~~~~~~--~~l~-~~l~   82 (398)
                      +++...+...+..+.+......+.++|..+.++  .+|.+++++.+.+.+....+|+..   .+....+  +.++ +++.
T Consensus        24 ~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la  101 (447)
T 3h7f_A           24 APLAEVDPDIAELLAKELGRQRDTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK  101 (447)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHHhCceeEecCCCC--CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence            334444555555554443333577888766554  489999999988754222334321   2333333  4555 7777


Q ss_pred             hhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh-h----HHHhcCcEEEEeccCCCCCCCCChHHHHH
Q 015890           83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-M----SFQMTGVTHILVGPCSSKTLHPDADWLEK  157 (398)
Q Consensus        83 ~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~  157 (398)
                      +.++.+.. .++++|+++++..++.+++++||+|+++.|+|.++. .    .....+..++.+ +.+.+++.+|++++++
T Consensus       102 ~~~g~~~~-~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~  179 (447)
T 3h7f_A          102 ALFGAEFA-NVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFY-GVDPATHLIDMDAVRA  179 (447)
T ss_dssp             HHHTCSEE-ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEE-CCCTTTCSCCHHHHHH
T ss_pred             HHcCCCce-EEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEc-CcCcccCCcCHHHHHH
Confidence            77776542 333778889999999999999999999999997732 1    122234567777 7665667799999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCC
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~  234 (398)
                      .++..+ +++|++++|+||++.  +   +++|.++|+++|+++|+||+|   +.+.+...... ...++++.|+||+++ 
T Consensus       180 ~i~~~~-~~~i~~~~~~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~-  251 (447)
T 3h7f_A          180 TALEFR-PKVIIAGWSAYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLG-  251 (447)
T ss_dssp             HHHHHC-CSEEEEECSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGC-
T ss_pred             HHHhcC-CeEEEEcCCCCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCC-
Confidence            996432 489999889998876  5   999999999999999999997   33334322222 123477999999985 


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCC-CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccC-----C
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL-----G  307 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-----~  307 (398)
                       |+|.||++++   +++++.+........ .+++.+.++++..++.. ..+++++..+++.++++++.+.|++.     +
T Consensus       252 -G~~gG~i~~~---~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g  327 (447)
T 3h7f_A          252 -GGRSGLIVGK---QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG  327 (447)
T ss_dssp             -CCSCEEEEEC---GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred             -CCCeEEEEEC---HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence             7889999998   677777765543222 33444445555555543 23467888889999999999999887     5


Q ss_pred             CCcccc-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe----cC--CCCCCCCeEEEEecC-----CCHHHHHHHHH
Q 015890          308 EGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PG--GACGCRGHLRISFGG-----LVEDDCKAAAD  375 (398)
Q Consensus       308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g--~~~~~~~~iRi~~~~-----~~~~~~~~~~~  375 (398)
                      . .+.. +..++++++.+.....+. +.+.++++++||.+.    |+  .....++++|+++..     .++++++++++
T Consensus       328 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~  405 (447)
T 3h7f_A          328 V-SVVSGGTDVHLVLVDLRDSPLDG-QAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVAD  405 (447)
T ss_dssp             C-EEGGGSCSSSEEEEECTTSSCCH-HHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHH
T ss_pred             e-EEecCCCCCCEEEEEcCCCCCCH-HHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHH
Confidence            5 4443 345778888886433344 444456678899998    55  223346789998653     36899999999


Q ss_pred             HHHHHHHHH
Q 015890          376 RLRRGLEEL  384 (398)
Q Consensus       376 ~l~~~~~~~  384 (398)
                      +|.+++.+.
T Consensus       406 ~l~~~l~~~  414 (447)
T 3h7f_A          406 IIATALATG  414 (447)
T ss_dssp             HHHHHHHSG
T ss_pred             HHHHHHhcc
Confidence            999988664

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.97  E-value=6.3e-31  Score=244.11  Aligned_cols=322  Identities=13%  Similarity=0.084  Sum_probs=230.1

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHhhhcCCCCC-c-EEEecChHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV  103 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~-v~~~~g~t~a~~  103 (398)
                      .+.++.|  +.++|+.+++++.+.+.+....      .........++++.+++.+++++|++++ + +++|+|++++++
T Consensus         5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~   82 (362)
T 2c0r_A            5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   82 (362)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence            4555555  4678999999999987542100      0111223456788888888888888764 6 567899999999


Q ss_pred             HHHHHhccCCCEEEEeCCCCcCh--hhHHHhcCcEEEEeccCCC---CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG  178 (398)
                      .++.+++++||+|+++.+++++.  ...++..| +++.+ +.+.   .+..+|.++++  ++++  +++|++++|+||||
T Consensus        83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v-~~~~~~~~~~~~~~~~~~--i~~~--t~~v~~~~~~n~tG  156 (362)
T 2c0r_A           83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVA-ASSEASNYMTLPKLQEIQ--LQDN--AAYLHLTSNETIEG  156 (362)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEE-EECGGGTTCSCCCGGGCC--CCTT--EEEEEEESEETTTT
T ss_pred             HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEE-ecccccccccCCCHHHcc--cCCC--cCEEEEeCCcCccc
Confidence            99999999999999987776553  45667789 88888 6552   33345666654  5544  59999999999999


Q ss_pred             cC-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          179 TY-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       179 ~~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      .. .+   +++|      +|+++|+|++| +.....  .....  ++++.|+||++|++|  +||++++   +++++.+.
T Consensus       157 ~~~~~---l~~i------~~~~vivD~a~~~~~~~~--~~~~~--d~~~~s~~K~~g~~G--~G~l~~~---~~~~~~l~  218 (362)
T 2c0r_A          157 AQFKA---FPDT------GSVPLIGDMSSDILSRPF--DLNQF--GLVYAGAQKNLGPSG--VTVVIVR---EDLVAESP  218 (362)
T ss_dssp             EECSS---CCCC------TTSCEEEECTTTTTSSCC--CGGGC--SEEEEETTTTTCCSS--CEEEEEE---GGGSSSCC
T ss_pred             eeccc---cccc------CCCEEEEEChhhccCCcc--chhHC--cEEEEeccccccCcC--cEEEEEc---HHHHhhcc
Confidence            96 44   5555      79999999999 443221  12222  477889999999778  8999998   55554432


Q ss_pred             Hh------------hccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCC-cccc---CCccE
Q 015890          257 KV------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG---GEGAI  318 (398)
Q Consensus       257 ~~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~---~~~~~  318 (398)
                      ..            .....++.+.+.+.++.++++...+  .+++..++++++++++.+.|++++.. .+..   ...+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  298 (362)
T 2c0r_A          219 KHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDM  298 (362)
T ss_dssp             TTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSS
T ss_pred             ccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCc
Confidence            21            1123467888888988888875222  57888899999999999999988722 4322   12245


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++++.++.. .+..++++.| .++||.+.+|..+  .+++|+|++. .++++++++++.|++++++
T Consensus       299 ~~~~~~~~~-~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~  360 (362)
T 2c0r_A          299 NITFRLASE-ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRS  360 (362)
T ss_dssp             EEEEECSCH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCc-chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            577777642 2456777776 5889999887655  4689999987 6899999999999988764

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=4.6e-31  Score=244.74  Aligned_cols=328  Identities=11%  Similarity=0.035  Sum_probs=226.1

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +...+..+..+.++.+++|++.+++.+.+..   ..|++..+..++++.+++++    +.+  ..++++|+++++..++.
T Consensus        11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~----~~~--~~i~~~~g~~a~~~a~~   81 (359)
T 3pj0_A           11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKIL----GKQ--SAVFFPSGTMAQQIALR   81 (359)
T ss_dssp             HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHH
T ss_pred             HhcchhhcCCCccccCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHH
Confidence            3456777778888888899999998875433   34666667788888888876    443  23556888899999999


Q ss_pred             HhccCCCE--EEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC-ccCC
Q 015890          108 TLCDAGDS--VVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYI  181 (398)
Q Consensus       108 ~l~~~gd~--Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt-G~~~  181 (398)
                      +++.+||+  |+++.+.|....   ......|.+++.+ +.+  .+.+|+++|++. .++  +++|++++|+||+ |.++
T Consensus        82 ~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~-~~~--~~~v~~~~p~n~~~G~~~  155 (359)
T 3pj0_A           82 IWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLL-GTA--NQLLTIDDIKSL-REP--VSSVLIELPQREIGGQLP  155 (359)
T ss_dssp             HHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEEC-SCT--TSCCCHHHHHTC-SSC--CSEEEEESSBGGGTSBCC
T ss_pred             HHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEec-CCc--CCCcCHHHHHhc-cCC--ceEEEEEecccCCCcccC
Confidence            99888876  555555543322   2225569999988 653  347899999998 443  5999999999998 7999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-ec---cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FM---YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      +.+++++|+++|++||+++|+|++| +.   +.+..........++++.|+||.++.++ + |+++.+   +++++.+..
T Consensus       156 ~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~---~~l~~~~~~  230 (359)
T 3pj0_A          156 AFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA-G-AILAGN---DDFVQEAKI  230 (359)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS-C-EEEEEC---HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc-e-EEEECC---HHHHHHHHH
Confidence            9999999999999999999999998 21   2222221111222355679999987442 2 777777   788888876


Q ss_pred             hhccCCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCCC-CChHH
Q 015890          258 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKH-LDDFE  333 (398)
Q Consensus       258 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~  333 (398)
                      .......+  .......++..+++.   . .+..+++.++++++.+.|++++++.+. .+..++++|+.++... .+..+
T Consensus       231 ~~~~~~~~~~~~~~~~~a~~~~l~~---~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (359)
T 3pj0_A          231 WKRRYGGDLISLYPYILSADYYFEK---R-IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAI  306 (359)
T ss_dssp             HHHHTTCCCSCCHHHHHHHHHHHHH---H-GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHH
T ss_pred             HHHHhCCCcchhHHHHHHHHHHHHH---H-HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHH
Confidence            54322222  222333333344442   1 234445677788899999888665664 4556888888876421 12345


Q ss_pred             HHHHHHHhcCeEEecCCCCCC--CCeEEEEecC----CCHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGG----LVEDDCKAAADRLRRG  380 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~----~~~~~~~~~~~~l~~~  380 (398)
                      +.+.| .++||.++||..|..  .+++|++++.    .+.+++++++++|.++
T Consensus       307 l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          307 LTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             HHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            55655 589999999987653  3589998763    3678888888888765

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.97  E-value=2.8e-31  Score=246.27  Aligned_cols=324  Identities=13%  Similarity=0.086  Sum_probs=229.4

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCC---CCCCCCC---CCCcHHHHHHHHHHHhhhcCCC-CCcEEEecCh-HHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA---DEGLPELRDALVKKLNQENKLY-KSSVMVTAGA-NQAF  102 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~-t~a~  102 (398)
                      .+++++.|.+  ++|+.+++++.+.+.+.   ....|..   ..+..++.+.+.++++++++++ +++|++++|+ ++++
T Consensus         3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al   80 (360)
T 1w23_A            3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF   80 (360)
T ss_dssp             CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence            4567777643  67899999999987542   1112222   3344456667777777777875 5689999999 9999


Q ss_pred             HHHHHHhccC---CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHH-hhccCCCCeEEEEeCCCCCC
Q 015890          103 VNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       103 ~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~-~l~~~~~~~~v~i~~p~npt  177 (398)
                      ..++.+++.+   ||.|+++.++|.. ...++..| +++.+ +.++ ++ .+|++++++ .++++  +++|++++|+|||
T Consensus        81 ~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v-~~~~~~~-~~d~~~l~~~~i~~~--~k~v~~~~~~npt  154 (360)
T 1w23_A           81 TMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIA-ASTKANS-YQSIPDFSEFQLNEN--DAYLHITSNNTIY  154 (360)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEE-EECGGGT-SCSCCCGGGCCCCTT--EEEEEEESEETTT
T ss_pred             HHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEe-ecccccC-cCCccchHhhccCCC--CCEEEEeCCCCCc
Confidence            9999999865   5567777776644 33467789 99988 7765 44 478999998 88655  4999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      |.+++  ++.      +++|+++|+|++| .......  ....  +++++|+||.+|++|  +||++++   +++++.+.
T Consensus       155 G~~~~--~i~------~~~~~~li~D~a~~~~~~~~~--~~~~--di~~~s~sK~~~~~G--~G~~~~~---~~~~~~~~  217 (360)
T 1w23_A          155 GTQYQ--NFP------EINHAPLIADMSSDILSRPLK--VNQF--GMIYAGAQKNLGPSG--VTVVIVK---KDLLNTKV  217 (360)
T ss_dssp             TEECS--SCC------CCCSSCEEEECTTTTTSSCCC--GGGC--SEEEEETTTTTSCTT--CEEEEEE---HHHHCSCC
T ss_pred             ceecc--ccc------ccCCceEEEechhhcCCCCcC--cccC--CEEEEEcccccCCCC--cEEEEEc---HHHHhhcc
Confidence            99987  232      2799999999999 4332211  1112  378999999998666  8999998   66665543


Q ss_pred             Hhh------------ccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCC-ccc-cC--CccE
Q 015890          257 KVQ------------DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEG-AVK-GG--EGAI  318 (398)
Q Consensus       257 ~~~------------~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~-~~--~~~~  318 (398)
                      ...            .....+.+...+.++..+++... . ++++..++++++++++.+.|++++.+ ... .+  .++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  297 (360)
T 1w23_A          218 EQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLM  297 (360)
T ss_dssp             TTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSS
T ss_pred             cCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCc
Confidence            321            01123456666667777776422 2 57788888999999999999887742 332 12  2345


Q ss_pred             EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ++++.++.. .+..+++++| .++||.+.++..+  +++||++++. .+++++++++++|++++++
T Consensus       298 ~~~~~~~~~-~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          298 NVTFNLRNE-ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             EEEEECSSH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCC-ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence            888888642 1345677765 4799999888643  6799999997 6889999999999887654

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.97  E-value=4.6e-30  Score=241.89  Aligned_cols=336  Identities=16%  Similarity=0.121  Sum_probs=233.9

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      ++.+++++.+ +++  ||++++++.+.+.+....+|+      ......++++.+++.+.+.++.+++.+++++| ++++
T Consensus        23 ~~~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~   98 (405)
T 2vi8_A           23 HAKIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQAN   98 (405)
T ss_dssp             HHSEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHH
T ss_pred             hcceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHH
Confidence            3457777554 343  899999999887532112221      11223456655556666666776544444555 9999


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcChhh-H--HHhcC--cEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFNSYM-S--FQMTG--VTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP  176 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~np  176 (398)
                      ..++.+++++||+|+++.|+|..+.. .  +...|  .+++.+ +.++.++.+|++.+++.++. ++  ++|+++ |+|.
T Consensus        99 ~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~--~~v~~~-~~~~  174 (405)
T 2vi8_A           99 MAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKARLHRP--KLIVAA-AAAY  174 (405)
T ss_dssp             HHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHHHHHCC--SEEEEC-CSSC
T ss_pred             HHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEec-ccccccCCcCHHHHHHHHHhcCC--eEEEEe-CCCC
Confidence            99999999999999999999977643 1  12334  377777 66544567899999999985 54  888774 4443


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~  252 (398)
                       |...+   +++|.++|+++|+++|+||+| ++.  .+....... ..+++++|+||+++ ++|   ||++++   ++++
T Consensus       175 -~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~~~g~~g---G~~~~~---~~~~  243 (405)
T 2vi8_A          175 -PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP-YAHFVTTTTHKTLRGPRG---GMILCQ---EQFA  243 (405)
T ss_dssp             -CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSEEEEESSSTTCCCSC---EEEEEC---HHHH
T ss_pred             -CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCccc-cCCEEEEeccccCCCCCC---eEEEEc---HHHH
Confidence             45556   899999999999999999999 332  222211111 23488999999997 455   999998   7888


Q ss_pred             HHHHHhhccCCCCc-chHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCC
Q 015890          253 TQLLKVQDNIPICA-SIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHL  329 (398)
Q Consensus       253 ~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~  329 (398)
                      +.+.........+. +....+++.++++.. ..++++..+++.++++++.+.|++++. .+..+ ..++++|+.++....
T Consensus       244 ~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~  322 (405)
T 2vi8_A          244 KQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGF-TLVSGGTDNHLLLVDLRPQQL  322 (405)
T ss_dssp             HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTC
T ss_pred             HHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eEecCCCCceEEEEEccCCCC
Confidence            88776553333333 455555555666542 356788888999999999999988754 66554 347888999864223


Q ss_pred             ChHHHHHHHHHhcCeEEecCCC----C--CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHHh
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGA----C--GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~----~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +..++...| .++||.+.+|..    +  ..++++|++++.     .+++++++++++|+++++++.
T Consensus       323 ~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~  388 (405)
T 2vi8_A          323 TGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG  388 (405)
T ss_dssp             CHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred             CHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence            566777766 589999999863    1  235789999884     579999999999999886653

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.97  E-value=7.3e-30  Score=244.97  Aligned_cols=346  Identities=18%  Similarity=0.156  Sum_probs=246.3

Q ss_pred             hHHHHHHHHHHcCC----CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHhhhcCCCC
Q 015890           17 PIMVQIQELVRGAK----NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYK   89 (398)
Q Consensus        17 ~~~~~~~~~~~~g~----~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~   89 (398)
                      ..++.+.+....+.    ..+.|+ +..+ ...|.+.+++.+.+..  .+.|++   ..|..++++.+++++.+.+|.+.
T Consensus        49 ~~~~~~~~l~~~~~~~~~~~~~lg-~~~~-~~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~  124 (474)
T 1wyu_B           49 TLVRHYTGLSRRQVGVDTTFYPLG-SCTM-KYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA  124 (474)
T ss_dssp             HHHHHHHHHHTTCCCTTTSCCCBT-TTCC-CCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHHhCCCCcccCccccc-cccc-cCCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc
Confidence            34555555554433    356666 5433 2346777777765333  234443   45667899999999999888764


Q ss_pred             CcEEEecChHHHHHHHHHHh----ccCCC-----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890           90 SSVMVTAGANQAFVNIVLTL----CDAGD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus        90 ~~v~~~~g~t~a~~~~~~~l----~~~gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                       .+++++|+++++..++.++    .++||     +|+++.++|+.+...++..|++++.+ +.+++ +.+|+++|+++++
T Consensus       125 -~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v-~~~~~-~~~d~~~L~~~i~  201 (474)
T 1wyu_B          125 -ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREI-PSGPE-GEVDLEALKRELG  201 (474)
T ss_dssp             -EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTT-SSBCHHHHHHHCS
T ss_pred             -eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEe-cCCCC-CCcCHHHHHHhhC
Confidence             4667899999999866554    35777     99999999999999999999999999 87654 5789999999998


Q ss_pred             cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCC-c-
Q 015890          161 TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMM-G-  236 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-  236 (398)
                      +++  ++|++++| ||+|.+ .+   +++|+++|+++|+++|+|++| ....+.. .....+.++++.|+||+|+.| | 
T Consensus       202 ~~t--~~v~~~~p-n~~G~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g~~-~~~~~g~di~~~s~~K~~~~p~g~  274 (474)
T 1wyu_B          202 PHV--AALMLTNP-NTLGLFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWA-RPGDMGFDVVHLNLHKTFTVPHGG  274 (474)
T ss_dssp             TTE--EEEEECSS-CTTSCCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTC-CHHHHTCSEEECCTTTTTCCCCTT
T ss_pred             CCc--eEEEEECC-CCCcccCCC---HHHHHHHHHHcCCEEEEeCchhhhhccCC-CcccCCCcEEEEeCccccccCCCC
Confidence            654  89999988 589998 45   999999999999999999999 3322211 111123568889999999765 4 


Q ss_pred             --ceeEEEEccCCcHHHHHHHHH-hh------------------ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHH
Q 015890          237 --WRVGYIAYPSEVEGFATQLLK-VQ------------------DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVR  294 (398)
Q Consensus       237 --~r~G~i~~~~~~~~~~~~l~~-~~------------------~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~  294 (398)
                        +|+||++++   +++++.+.. ..                  ....++.+...+.++..++.. +.+++++..+++.+
T Consensus       275 gG~~~G~~~~~---~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~  351 (474)
T 1wyu_B          275 GGPGSGPVGVK---AHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVL  351 (474)
T ss_dssp             SCCCCCCEEEC---GGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEc---HHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              599999999   555554431 00                  011234566777777777763 34567788888999


Q ss_pred             HHHHHHHHhccCCCCccccCCccE-EEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecC-CCHHHH
Q 015890          295 NREIIREALSPLGEGAVKGGEGAI-YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDC  370 (398)
Q Consensus       295 ~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~  370 (398)
                      +++++.+.|++.+. .+..+...+ .+++.++. ..+..++.++|+ ++||.+ ++..|.  ..+++||+++. .+.+++
T Consensus       352 ~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~i  427 (474)
T 1wyu_B          352 NARYLKELLKEKGY-RVPYDGPSMHEFVAQPPE-GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETL  427 (474)
T ss_dssp             HHHHHHHHHHHTTC-BCSSCSSCCSCEEEBCST-TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHH
T ss_pred             HHHHHHHHHhhcCc-EecCCCCcceEEEEEcCC-CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHH
Confidence            99999999987743 543222122 15566632 236778888886 679985 444443  36799999997 688999


Q ss_pred             HHHHHHHHHHHHH
Q 015890          371 KAAADRLRRGLEE  383 (398)
Q Consensus       371 ~~~~~~l~~~~~~  383 (398)
                      ++++++|++++++
T Consensus       428 d~~~~~L~~~~~~  440 (474)
T 1wyu_B          428 EAFAEAMGALLKK  440 (474)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988754

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.97  E-value=1.7e-29  Score=245.14  Aligned_cols=310  Identities=13%  Similarity=0.061  Sum_probs=231.5

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhcCCCC--CcE--EEecChHHHHHHHHHHhccCC--------CEEEEeCCCCcChhh
Q 015890           61 ISKYGADEGLPELRDALVKKLNQENKLYK--SSV--MVTAGANQAFVNIVLTLCDAG--------DSVVMFAPYYFNSYM  128 (398)
Q Consensus        61 ~~~y~~~~~~~~~~~~l~~~l~~~~~~~~--~~v--~~~~g~t~a~~~~~~~l~~~g--------d~Vl~~~p~~~~~~~  128 (398)
                      ...|...++..++++.+.+++.+.+|.++  +++  ++++|+++++..++.+++++|        |+|+++.++|.++..
T Consensus       128 ~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~  207 (514)
T 3mad_A          128 PLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK  207 (514)
T ss_dssp             TTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH
T ss_pred             CcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH
Confidence            34454556677889999999999888764  677  999999999999999998766        899999999999999


Q ss_pred             HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890          129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--  206 (398)
Q Consensus       129 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--  206 (398)
                      .++..|++++.+ +.++ ++.+|+++|++++++++  ++|++++|+||||.+.+   +++|.++|+++|+++|+|++|  
T Consensus       208 ~~~~~G~~v~~v-~~~~-~~~~d~~~Le~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~  280 (514)
T 3mad_A          208 AAQYFGIKLVRT-PLDA-DYRADVAAMREAITPNT--VVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGG  280 (514)
T ss_dssp             HHHHHTCEEEEE-CBCT-TSCBCHHHHHHHCCTTE--EEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTT
T ss_pred             HHHHcCCeeEEe-eeCC-CCCCCHHHHHHHhccCC--EEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEeccccc
Confidence            999999999999 8776 46789999999998754  99999999999999999   899999999999999999999  


Q ss_pred             ecc-----CCC---ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-----------cCCCCcc
Q 015890          207 FMY-----DGR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-----------NIPICAS  267 (398)
Q Consensus       207 ~~~-----~~~---~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~-----------~~~~~~~  267 (398)
                      +..     .|.   .......+.++++.|++|+++ +|.++|++++++   +..........           ....+.+
T Consensus       281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~gs~~  356 (514)
T 3mad_A          281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRR---PDLLHYQYFIAADWPGGLYFSPTFAGSRP  356 (514)
T ss_dssp             TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESS---HHHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred             ccchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeC---HHHhccccccccccCCCcccCCccCCCCc
Confidence            321     122   122222345688899999964 678899998884   33222110000           0011223


Q ss_pred             hHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          268 IISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       268 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      .....++..++.. +..++++..++..++++++.+.|++++.+.+..+. ..++++....  .+..++.++|. ++||.+
T Consensus       357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~--~~~~~l~~~L~-~~Gi~v  432 (514)
T 3mad_A          357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDE--LNIYQVMEEMA-GRGWRL  432 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSS--SCHHHHHHHHH-TTTCBC
T ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCC--CCHHHHHHHHH-hcCCEe
Confidence            3333333333332 23567888888999999999999988666776665 3466666542  35778888775 779988


Q ss_pred             ecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhccc
Q 015890          347 IPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKDG  388 (398)
Q Consensus       347 ~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~~~  388 (398)
                       ++.  ..++++|++++.  .+++++++++++|+++++++.+..
T Consensus       433 -~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~  473 (514)
T 3mad_A          433 -NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHP  473 (514)
T ss_dssp             -EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCT
T ss_pred             -ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             443  236789999884  456899999999999998876543

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.97  E-value=3.4e-29  Score=233.44  Aligned_cols=312  Identities=12%  Similarity=0.089  Sum_probs=225.1

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh---ccCCCEEEEe
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL---CDAGDSVVMF  119 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l---~~~gd~Vl~~  119 (398)
                      ++||++++++.+.+.+.   .|.+.....++++.+++++    +.+  ++++++|+++|+..++.++   .++||+|+++
T Consensus        10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~   80 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFL----GVK--HALVFNSATSALLTLYRNFSEFSADRNEIITT   80 (375)
T ss_dssp             CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred             CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence            46899999999988653   1334556678888888887    443  8999999999999999999   8899999999


Q ss_pred             CCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890          120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (398)
Q Consensus       120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (398)
                      .|+|+++...++..|++++.+ +.++++ .+|++.+++.++++  +++|+++++   ||.+.+   +++|.++|+++|++
T Consensus        81 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~--~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~  150 (375)
T 2fnu_A           81 PISFVATANMLLESGYTPVFA-GIKNDG-NIDELALEKLINER--TKAIVSVDY---AGKSVE---VESVQKLCKKHSLS  150 (375)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEC-CBCTTS-SBCGGGSGGGCCTT--EEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred             CCccHhHHHHHHHCCCEEEEe-ccCCCC-CCCHHHHHhhcCcC--ceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence            999999999999999999999 877665 78999999999865  488887765   999999   89999999999999


Q ss_pred             EEEeece-eccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEc-cCCcHHHHHHHHHhhccC-------------
Q 015890          200 LVVDNTY-FMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNI-------------  262 (398)
Q Consensus       200 livDe~~-~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~-~~~~~~~~~~l~~~~~~~-------------  262 (398)
                      +|+|++| +............+ ++++.|+|  |.+++ |  +|++++ ++  +++++.+.......             
T Consensus       151 li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (375)
T 2fnu_A          151 FLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVKS  224 (375)
T ss_dssp             EEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEESS
T ss_pred             EEEECccccCCeECCeeccccC-CeEEEeCCCCCCccc-c--CceEEEeCC--HHHHHHHHHHHhcCCcccccccccccc
Confidence            9999999 32211111111111 36666777  99974 6  677776 43  56777776543211             


Q ss_pred             -C--CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC-----ccEEEEeeCCCCCC-ChHH
Q 015890          263 -P--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEKHL-DDFE  333 (398)
Q Consensus       263 -~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~  333 (398)
                       .  +..+....++....+    +++++..++.+++++++.+.|++++++.+..+.     ..+++++.++.... +..+
T Consensus       225 ~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (375)
T 2fnu_A          225 IGHNFRLNEIQSALGLSQL----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKL  300 (375)
T ss_dssp             CCCBCCCCHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHH
T ss_pred             ccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHH
Confidence             1  123333333222222    335677788888999999999987654555431     12345667653212 4667


Q ss_pred             HHHHHHHhcCeEEecCCC-------CC-------C-------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGA-------CG-------C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+.|. ++||.++....       |+       .       .+++||+++. .+++++++++++|+++++++
T Consensus       301 l~~~L~-~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~  372 (375)
T 2fnu_A          301 ILESLH-KRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF  372 (375)
T ss_dssp             HHHHHH-HTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            888774 88999984321       10       1       1579999997 78999999999999988764

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.97  E-value=2.7e-30  Score=239.34  Aligned_cols=313  Identities=14%  Similarity=0.090  Sum_probs=213.3

Q ss_pred             cHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCC--EEEEeCC
Q 015890           45 PKMAMEKVKELVW-DPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFAP  121 (398)
Q Consensus        45 ~~~v~~a~~~~~~-~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd--~Vl~~~p  121 (398)
                      .+++++++.+.+. ......|+++++..++++.+++++    +.  +..++++|+++++..++.+++.+||  .|+++.+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~   96 (357)
T 3lws_A           23 NVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVL----GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPL   96 (357)
T ss_dssp             BHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred             CHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHh----CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEeccc
Confidence            4555555444321 112345766778889999999887    43  3345557888999999999988887  6777666


Q ss_pred             CCcChhh---HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcC
Q 015890          122 YYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAG  197 (398)
Q Consensus       122 ~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~  197 (398)
                      .|+....   .....|.+++.+ +.+  .+.+|+++|+++.+    +++|++++|+||| |.+++.+++++|+++|++||
T Consensus        97 ~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~~~----~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~  169 (357)
T 3lws_A           97 CHLEIHEQDGLKELHPIETILV-GAA--DRLMTLDEIKALPD----IACLLLELPQREIGGVAPAFSELETISRYCRERG  169 (357)
T ss_dssp             CHHHHSSTTHHHHHSSCEEEEC-SCT--TSCCCHHHHHTCCS----CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTT
T ss_pred             ceeeeeccchhhhccCcEEEEe-cCC--CCCcCHHHHhcCcC----cceEEEEcccccCCceeCCHHHHHHHHHHHHHcC
Confidence            6544332   356678999888 642  34689999998832    5999999999998 99999999999999999999


Q ss_pred             CEEEEeecee----ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC--cchHHH
Q 015890          198 SWLVVDNTYF----MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC--ASIISQ  271 (398)
Q Consensus       198 ~~livDe~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~  271 (398)
                      +++|+|++|.    .+.+...........+++.|+||.++.++  .||++.+   +++++.+.........+  .....+
T Consensus       170 ~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~--gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  244 (357)
T 3lws_A          170 IRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIA--GAILAGP---AAFCQTARIWKRRYGGDLISLYPYI  244 (357)
T ss_dssp             CEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSS--CEEEEEC---HHHHHHHHHHHHHTTCCCSCCHHHH
T ss_pred             CEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCc--eEEEEcC---HHHHHHHHHHHHHhcCCcccchHHH
Confidence            9999999982    22232221111112245789999994232  2999888   78888887655332222  223333


Q ss_pred             HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecC
Q 015890          272 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPG  349 (398)
Q Consensus       272 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g  349 (398)
                      .++..+++.   +. +..+++.++++++.+.|++++++.+ ..+.+++++|++++... .+..++.+.| .++||.++||
T Consensus       245 ~~~~~~l~~---~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~g  319 (357)
T 3lws_A          245 VSADYYYEL---RK-DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQ-EETGLGFVGY  319 (357)
T ss_dssp             HHHHHHHHH---HT-TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHH-HHHCEESCSC
T ss_pred             HHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHH-HhcCeEEecc
Confidence            444445542   22 2233456778888999988866566 34666899999987421 1234566555 5899999999


Q ss_pred             CCCCCCC--eEEEEecC----CCHHHHHHHHHHHHHHH
Q 015890          350 GACGCRG--HLRISFGG----LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       350 ~~~~~~~--~iRi~~~~----~~~~~~~~~~~~l~~~~  381 (398)
                      ..+. ++  ++|++++.    .+.+++++++++|.+++
T Consensus       320 ~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          320 LVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             CEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             cccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            7665 44  89999774    36788898888887764

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.97  E-value=4.5e-30  Score=245.47  Aligned_cols=330  Identities=13%  Similarity=0.091  Sum_probs=219.0

Q ss_pred             cCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        28 ~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +|+.++||+.|.  ++++ .||.+.+++.+++.+..  .|   .+..++++.+++++.+.++ +.++|++++|+++|+..
T Consensus        55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~  128 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLL  128 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHH
T ss_pred             CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHH
Confidence            467799998875  3333 68999999999987632  23   2356899999999988876 67899999999999999


Q ss_pred             HHHH---hccCCCEEEEeCCCCcChhhHHHh-----------cCcE------EEEeccCCCCCCCCChHHHHHhhccC-C
Q 015890          105 IVLT---LCDAGDSVVMFAPYYFNSYMSFQM-----------TGVT------HILVGPCSSKTLHPDADWLEKTLETK-P  163 (398)
Q Consensus       105 ~~~~---l~~~gd~Vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~e~l~~~l~~~-~  163 (398)
                      ++++   +.+ +++|++.+|+|+++...+..           .|+.      +..+ +.      .|+++|++.++.. .
T Consensus       129 al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~  200 (453)
T 2cy8_A          129 ALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-RP------DDIEGMREVFANHGS  200 (453)
T ss_dssp             HHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEE-CT------TCHHHHHHHHHHHGG
T ss_pred             HHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-CC------CCHHHHHHHHHhcCC
Confidence            9998   554 47899999999876553321           1221      2222 21      3899999998731 2


Q ss_pred             CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeE
Q 015890          164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG  240 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  240 (398)
                      .+++|++++.+|+||.+ .+++++++|.++|++||+++|+||+|  + +.+........+....+.|+||.++ +|+|+|
T Consensus       201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G~~~G  278 (453)
T 2cy8_A          201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASA-GGLPGG  278 (453)
T ss_dssp             GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGG-TTSSCE
T ss_pred             CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhh-CCcceE
Confidence            24677666556779976 57999999999999999999999999  5 3332211111111111338999998 589999


Q ss_pred             EEEccCCcHHHHHHHHH-----hhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015890          241 YIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSP----LGEGA  310 (398)
Q Consensus       241 ~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~  310 (398)
                      |++++   +++++.+..     .....+++.|+++++++.++|+. .   .++..++++++++++.+.|++    .+...
T Consensus       279 ~v~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  352 (453)
T 2cy8_A          279 ILGGR---EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAMNHLFARKGLNW  352 (453)
T ss_dssp             EEEEC---HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred             EEech---HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence            99999   777776644     11233567888888888888864 2   123344555555555555543    34433


Q ss_pred             cccCCccEEEEeeCCC-----C-------------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHH
Q 015890          311 VKGGEGAIYLWARLPE-----K-------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA  372 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~  372 (398)
                      ...+. +.++|+.++.     .             .....++...|+ ++||.+.|+      +.+|+++. .+++++++
T Consensus       353 ~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~l~~~-~t~~~i~~  423 (453)
T 2cy8_A          353 LAYGR-FSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVFLSAQ-HEREHVEH  423 (453)
T ss_dssp             EEECC-TTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEECCTT-CCHHHHHH
T ss_pred             EEEEe-eeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEEeecc-CCHHHHHH
Confidence            34444 6788888864     1             011456777776 789999653      24777644 59999999


Q ss_pred             HHHHHHHHHHHHhccc
Q 015890          373 AADRLRRGLEELVKDG  388 (398)
Q Consensus       373 ~~~~l~~~~~~~~~~~  388 (398)
                      ++++|.++++++.+.+
T Consensus       424 ~l~~l~~~l~~~~~~~  439 (453)
T 2cy8_A          424 LVTTFDRVLDRLADEN  439 (453)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC
Confidence            9999999999886643

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.97  E-value=9.9e-31  Score=249.38  Aligned_cols=337  Identities=13%  Similarity=0.094  Sum_probs=227.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHH-H-HHHH---hhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC-CCCCcEEEecC
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAM-E-KVKE---LVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAG   97 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~-~-a~~~---~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~-~~~~~v~~~~g   97 (398)
                      .+|+.|+||..|.  ++++ .+|.+. + ++.+   ++....  .|+ ..+..+....+++.+.+.++ .+.++|++++|
T Consensus        51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~-~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~  127 (449)
T 2cjg_A           51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK--PSN-SDVYSVAMARFVETFARVLGDPALPHLFFVEG  127 (449)
T ss_dssp             TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC--CCT-TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESS
T ss_pred             CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC--CCC-cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCc
Confidence            4577899997665  4454 489999 9 9999   776532  232 12233445555555555555 45789999999


Q ss_pred             hHHHHHHHHHHhc---c-----------CCCEEEEeCCCCcChhhHHHh---------cCc-----EEEEeccCCCCCC-
Q 015890           98 ANQAFVNIVLTLC---D-----------AGDSVVMFAPYYFNSYMSFQM---------TGV-----THILVGPCSSKTL-  148 (398)
Q Consensus        98 ~t~a~~~~~~~l~---~-----------~gd~Vl~~~p~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~-  148 (398)
                      +++|++.+++.+.   +           +|++|++++|+|+++...+..         .+.     .+..+ +.++.+. 
T Consensus       128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~  206 (449)
T 2cjg_A          128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDA-PYMRPGLD  206 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECC-CCCCTTCC
T ss_pred             hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEE-cCCCchhh
Confidence            9999999998653   2           289999999999886543211         122     34444 4332101 


Q ss_pred             --------CCChHHHHHhhcc-CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc
Q 015890          149 --------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC  216 (398)
Q Consensus       149 --------~~d~e~l~~~l~~-~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~  216 (398)
                              ..+++.|++.++. ...+++|+++..+||+|. .++++++++|.++|++||+++|+||+|  +++.|.....
T Consensus       207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~  286 (449)
T 2cjg_A          207 EPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAY  286 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTH
T ss_pred             ccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceee
Confidence                    1356668888862 122577777766799995 889999999999999999999999999  6665542221


Q ss_pred             ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH-----HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHH
Q 015890          217 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL-----KVQDNIPICASIISQHLALYSLQTGPEWVTERVKD  291 (398)
Q Consensus       217 ~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  291 (398)
                      ...+....+.|+||.+     |+||++++   +++++.+.     ......+++.++++++++.++|+...+  ++..++
T Consensus       287 ~~~~~~~di~t~sK~l-----~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~  356 (449)
T 2cjg_A          287 QQLDVAPDIVAFGKKT-----QVCGVMAG---RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA--EGLFER  356 (449)
T ss_dssp             HHHTCCCSEEEECGGG-----SSEEEEEC---GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH--HTHHHH
T ss_pred             cccCCCceEEEecCcc-----cEEEEEEC---HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh--ccHHHH
Confidence            1101111133788988     68999988   56665421     223335677889999999988874221  234455


Q ss_pred             HHHHHHHHHHHhcc----CCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-C
Q 015890          292 LVRNREIIREALSP----LGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L  365 (398)
Q Consensus       292 ~~~~~~~l~~~l~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~  365 (398)
                      ++++++++.+.|++    .+. +....+. +++++++++.. .+..+++.+|+ ++||.+.++.    .++||++++. .
T Consensus       357 ~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~~~  429 (449)
T 2cjg_A          357 AVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSLPTT-ADRDELIRQLW-QRAVIVLPAG----ADTVRFRPPLTV  429 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEET----TTEEEECCCTTC
T ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEECCh-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECCCCC
Confidence            66666666666654    343 3344455 66667788642 13567888886 7899999863    6899998776 7


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015890          366 VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++++++++++|.++++++
T Consensus       430 t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          430 STAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998764

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.97  E-value=3.4e-30  Score=244.96  Aligned_cols=332  Identities=16%  Similarity=0.125  Sum_probs=225.1

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||+.|.  ++++ .+|++.+++.+++.+.....|     ..++++.+++.+.+.++ ..++|++++|+++|+.
T Consensus        53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~  126 (434)
T 2epj_A           53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-----PGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATM  126 (434)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHH
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            3578899999886  3444 689999999999876322223     23455556666655554 4789999999999999


Q ss_pred             HHHHHh--ccCCCEEEEeCCCCcChhhHHH-h-------------cCc------EEEEeccCCCCCCCCChHHHHHhhcc
Q 015890          104 NIVLTL--CDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus       104 ~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      .+++..  ..++++|++++|+|+++...+. .             .|+      ++..+ +.      .|++.|++.++.
T Consensus       127 ~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~  199 (434)
T 2epj_A          127 TAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT-PY------NDVEALERVFAE  199 (434)
T ss_dssp             HHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE-ET------TCHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec-CC------CCHHHHHHHHHh
Confidence            999872  3345789999999988654221 1             122      23333 22      288999999873


Q ss_pred             C-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcc
Q 015890          162 K-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       162 ~-~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  237 (398)
                      . ..+++|+++..+|+||.+. +++++++|.++|++||+++|+||+|  + ..+........+....+.|+||.++ +|+
T Consensus       200 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G~  277 (434)
T 2epj_A          200 YGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIG-GGF  277 (434)
T ss_dssp             HGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGG-TTS
T ss_pred             CCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhc-CCc
Confidence            1 1247777766667899866 7999999999999999999999999  4 3232111111111122348899998 589


Q ss_pred             eeEEEEccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA  310 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~  310 (398)
                      |+||++++   +++++.+....   ...+++.+++.++++.++|+...+  ++..++++++.+++.+.|+++    +...
T Consensus       278 ~~G~v~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  352 (434)
T 2epj_A          278 PVGAVAGS---REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAASEVLDRTGLPY  352 (434)
T ss_dssp             SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             ceeeeeec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence            99999999   77777665421   234567888898888888874211  234455566666666666543    4432


Q ss_pred             cccCCccEEEEeeCCCCC------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          311 VKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      ...+. ++++++.++...            ....++...|+ ++||.+.++.    ...+|+++. .+++++++++++|.
T Consensus       353 ~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~  425 (434)
T 2epj_A          353 TINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSN----LEAVFTGLP-HQGEALEIAVEGLR  425 (434)
T ss_dssp             EEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CSHHHHHHHHHHHH
T ss_pred             EEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccC----CCcEEEecc-CCHHHHHHHHHHHH
Confidence            23344 677888886410            12456777775 7899999874    235777755 59999999999999


Q ss_pred             HHHHHHh
Q 015890          379 RGLEELV  385 (398)
Q Consensus       379 ~~~~~~~  385 (398)
                      ++++++.
T Consensus       426 ~~l~~~~  432 (434)
T 2epj_A          426 SSLKTVL  432 (434)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998763

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.97  E-value=9.9e-30  Score=237.07  Aligned_cols=321  Identities=15%  Similarity=0.144  Sum_probs=229.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++++|+.+.++..  + +.+++.+.+...   .|.+..+..++++.+++++    +.  +++++++|+++++..++.++
T Consensus         6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~a~~~~~~~~   73 (374)
T 3uwc_A            6 VPYSYLERQFADIE--P-YLNDLREFIKTA---DFTLGAELEKFEKRFAALH----NA--PHAIGVGTGTDALAMSFKML   73 (374)
T ss_dssp             BCSCCHHHHTSSCH--H-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHT----TC--SEEEEESCHHHHHHHHHHHT
T ss_pred             ceeeccccCCCCch--H-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHc
Confidence            45778887776653  4 888888877553   3667778888999999887    33  37889999999999999999


Q ss_pred             -ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 -~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                       .++||+|+++.|+|+++...++..|.+++.+ +.+ +++.+|++.+++.+++++  ++|+   |+||||.+.+   +++
T Consensus        74 ~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~--~~v~---~~n~~G~~~~---~~~  143 (374)
T 3uwc_A           74 NIGAGDEVITCANTFIASVGAIVQAGATPVLV-DSE-NGYVIDPEKIEAAITDKT--KAIM---PVHYTGNIAD---MPA  143 (374)
T ss_dssp             TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBC-TTSSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred             CCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-ecC-CCCCcCHHHHHHhCCCCc--eEEE---EeCCcCCcCC---HHH
Confidence             8999999999999999999999999999999 776 556789999999998753  7777   8899999998   999


Q ss_pred             HHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015890          189 ISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--  261 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~--  261 (398)
                      |.++|+++|+++|+|++| .  .+.+......   .++++.|+|  |.++.+|. +|+++.++  +++.+.+......  
T Consensus       144 i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~---~d~~~~s~~~~K~l~~~g~-~g~~~~~~--~~~~~~~~~~~~~~~  217 (374)
T 3uwc_A          144 LAKIAKKHNLHIVEDACQTILGRINDKFVGSW---GQFACFSLHPLKNLNVWSD-AGVIITHS--DEYAEKLRLYRNHGL  217 (374)
T ss_dssp             HHHHHHHTTCEEEEECTTCTTCEETTEETTSS---SSEEEEECSSSSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTE
T ss_pred             HHHHHHHcCCEEEEeCCCccCceeCCeecccc---ccEEEEeCCCCCcCCccce-eEEEEeCC--HHHHHHHHHHHhcCc
Confidence            999999999999999999 2  2333222211   246677766  99975465 78888775  6777777655421  


Q ss_pred             ----------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc-CCccEEEEeeCCCCCC
Q 015890          262 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG-GEGAIYLWARLPEKHL  329 (398)
Q Consensus       262 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~-~~~~~~~~~~~~~~~~  329 (398)
                                ..+..+....++....+    +.+++..++.+++.+++.+.|++++. +.+.. +.++...|..+.....
T Consensus       218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (374)
T 3uwc_A          218 INRDVCVEYGINCRMDTIQAVIANRLM----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK  293 (374)
T ss_dssp             EETTEESSCCCBCBCCHHHHHHHHHHG----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET
T ss_pred             cccCccccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC
Confidence                      11222333333332222    23566777777888889999888764 34432 2222221111110011


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCC----C-------------------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGAC----G-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~----~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +..++.+.|. ++||.++++...    .                   ..+.+|++++. .+++|++++++.|++++++
T Consensus       294 ~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~  370 (374)
T 3uwc_A          294 YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE  370 (374)
T ss_dssp             THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHH-HCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence            4667777764 789999988611    0                   01679999888 8999999999999998865

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.7e-29  Score=234.47  Aligned_cols=283  Identities=20%  Similarity=0.197  Sum_probs=204.7

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh----cCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~  146 (398)
                      .+.++.+.+.+.++++.  +++++++|+++|+..++.+++++||+|+++.|+|+++...++.    .|.+++.+ +.+  
T Consensus        80 ~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~--  154 (414)
T 3ndn_A           80 NPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV-DGD--  154 (414)
T ss_dssp             CHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT--
T ss_pred             ChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe-CCC--
Confidence            44566666666666564  5788999999999999999999999999999999987766644    89999988 653  


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                          |++.|++++++++  ++|++++|+||||.+.+   +++|+++|+++|+++|+|++| .++...+.   ..+.++++
T Consensus       155 ----d~~~l~~ai~~~t--~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~---~~g~div~  222 (414)
T 3ndn_A          155 ----DLSQWERALSVPT--QAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQGF---PLGVDVVV  222 (414)
T ss_dssp             ----CHHHHHHHTSSCC--SEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCCG---GGTCSEEE
T ss_pred             ----CHHHHHHhcCCCC--eEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCch---hcCCCeEe
Confidence                8899999998765  99999999999999998   999999999999999999999 33212111   22345889


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHH-HHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      .|+||.++.+| +++|+++++   ++.+. .+.........+.++...+++...++.    +..+.++..+++..+.+.|
T Consensus       223 ~S~sK~l~~~G~~~~G~vv~~---~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L  295 (414)
T 3ndn_A          223 YSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET----LAIRVQHSNASAQRIAEFL  295 (414)
T ss_dssp             EETTTTTTCSSCCCCEEEEEC---HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCccccCCCCceEEEEEEC---HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence            99999998778 899999998   56554 555444433445555555555555543    5566677778888888888


Q ss_pred             ccCCCCc-cccCC----------------ccEEEEeeCCCC----CCChHHHHHHHHHhcCeEEecCCCCC---------
Q 015890          304 SPLGEGA-VKGGE----------------GAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACG---------  353 (398)
Q Consensus       304 ~~~~~~~-~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~---------  353 (398)
                      ++.+.+. +..|.                .+.++++.++..    ..+...+++.+ +..++.+..|..+.         
T Consensus       296 ~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~  374 (414)
T 3ndn_A          296 NGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLGDAKSLVTHPATTT  374 (414)
T ss_dssp             HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCSCSSCEEECGGGTT
T ss_pred             hcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCCCCCceeeCccccc
Confidence            8776532 22221                366788888642    11234455544 35566666665431         


Q ss_pred             --------------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          354 --------------CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       354 --------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                                    .++.||+|++.   |+.+.+++.|.+++
T Consensus       375 ~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al  413 (414)
T 3ndn_A          375 HRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL  413 (414)
T ss_dssp             TCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence                          24689999997   55666677777665

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.97  E-value=1.4e-29  Score=239.80  Aligned_cols=337  Identities=15%  Similarity=0.107  Sum_probs=222.1

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      +.+.+..+.+.  .||.+.+++.+.+.+....+|      ........+++...+++.+.++.++++|++++| ++++..
T Consensus        31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~  107 (420)
T 3gbx_A           31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA  107 (420)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence            45666555444  589999999988744221122      222333455555556777777887766766655 789999


Q ss_pred             HHHHhccCCCEEEEeCCCCcChh---hHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015890          105 IVLTLCDAGDSVVMFAPYYFNSY---MSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       105 ~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~  179 (398)
                      ++.+++++||+|+++.|+|.++.   ......  +...+.+ +.+ .++.+|+++|++++++++ +++|++++|+||+  
T Consensus       108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~i~~~~-~~~v~~~~~~~~~--  182 (420)
T 3gbx_A          108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPY-GID-ESGKIDYDEMAKLAKEHK-PKMIIGGFSAYSG--  182 (420)
T ss_dssp             HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEE-EEC-TTCSCCHHHHHHHHHHHC-CSEEEECCTTCCS--
T ss_pred             HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEec-cCC-ccCCcCHHHHHHHHHhcC-CeEEEEecCccCC--
Confidence            99999999999999999997633   221222  3455566 555 345789999999998643 5999998888864  


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      ..+   +++|.++|++||+++|+||+|   +.+.+....... ..+++++|+||+++  |.+.||++.++..+++.+.+.
T Consensus       183 ~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~  256 (420)
T 3gbx_A          183 VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLN  256 (420)
T ss_dssp             CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHH
T ss_pred             ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhh
Confidence            566   899999999999999999998   333332222222 24588999999995  555699999832226666665


Q ss_pred             HhhccCC-CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEEeeCCCCCCChHH
Q 015890          257 KVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       257 ~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  333 (398)
                      ....... .+++...+.++..++.. ..+++++..+++.++++++.+.|++.+. .+..+ ..++++|+.++....+...
T Consensus       257 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~  335 (420)
T 3gbx_A          257 SAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGY-KVVSGGTENHLFLLDLVDKNLTGKE  335 (420)
T ss_dssp             HHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTCCHHH
T ss_pred             hhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCC-eeccCCCCCeEEEEEcCCCCCCHHH
Confidence            5443222 23445555555545433 3466788888999999999999987655 55432 4478888887643334555


Q ss_pred             HHHHHHHhcCeEEec-------CCCCCCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIP-------GGACGCRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~-------g~~~~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +...| +++||.+.+       +..+ .++.+||+++.     .+++++++++++|.+++.+.
T Consensus       336 ~~~~l-~~~gi~v~~~~~~~~~~~~~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  396 (420)
T 3gbx_A          336 ADAAL-GRANITVNKNSVPNDPKSPF-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI  396 (420)
T ss_dssp             HHHHH-HHTTEECEEECCTTCSSCTT-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHH-HHCCcEeccccCCCCccccC-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence            55544 689999998       3323 24569999864     24688999999998887654

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.97  E-value=2.2e-29  Score=239.01  Aligned_cols=337  Identities=12%  Similarity=0.048  Sum_probs=218.2

Q ss_pred             HcCCCeEEcCCccC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|..  .++ .+|++.+++.+++.+.....| +.    +....+++.+.+.++ ..+++++++|++++++
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~----~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~  123 (429)
T 4e77_A           50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-PT----EMEVKMAQLVTDLVP-TMDMVRMVNSGTEATM  123 (429)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-CC----HHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-CC----HHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHH
Confidence            36788999998763  444 589999999999877433334 33    445555555555555 5789999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHH-hcCcEE--EEeccCCCCCC------------CCChHHHHHhhccC-CCC
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTH--ILVGPCSSKTL------------HPDADWLEKTLETK-PTP  165 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~~~--~~~~~~~~~~~------------~~d~e~l~~~l~~~-~~~  165 (398)
                      .+++...  .++++|++..++|++....+. ..+...  ... +.. .+.            ..|+++|++.++.. ..+
T Consensus       124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  201 (429)
T 4e77_A          124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQ-PNS-PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV  201 (429)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCC-------------------CCC-TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCC-CCc-CCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence            9998654  356799999999988765221 111110  011 110 000            12789999999742 224


Q ss_pred             eEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEE
Q 015890          166 KLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI  242 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i  242 (398)
                      ++|+++..++++|.+. +++.+++|.++|++||+++|+||+|  | ..+........+....+.|+||.++ +|+|+||+
T Consensus       202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~-~G~~~G~~  279 (429)
T 4e77_A          202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIG-GGMPVGAF  279 (429)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGG-TTSCCEEE
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeeccccc-CCCCeEEE
Confidence            5555544344455544 4667999999999999999999999  5 3332221111111122348899998 79999999


Q ss_pred             EccCCcHHHHHHHHHh---hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCcc
Q 015890          243 AYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA  317 (398)
Q Consensus       243 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  317 (398)
                      +++   +++++.+...   ....+++.++++++++.++|+.  .++..++..+.....++.+.+.+...+......+. +
T Consensus       280 ~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g  355 (429)
T 4e77_A          280 GGR---REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHV-G  355 (429)
T ss_dssp             EEC---HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-T
T ss_pred             EEC---HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe-e
Confidence            998   7888776542   2344667899999999888874  13444444444455555666555555653334343 7


Q ss_pred             EEEEeeCCCCC-------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          318 IYLWARLPEKH-------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       318 ~~~~~~~~~~~-------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++++.++...             ....+++..|+ ++||.+.++.    ...+|+++. .+++++++++++|++++++
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA----FEAGFMSLA-HSNEDIQKTVNAARRCFAK  428 (429)
T ss_dssp             TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC----CCCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence            78888886531             01156777775 7899999874    345676655 5899999999999988753

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.97  E-value=2.2e-28  Score=235.95  Aligned_cols=348  Identities=14%  Similarity=0.046  Sum_probs=248.7

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEE---EecChHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVM---VTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~---~~~g~t~a~  102 (398)
                      ++++.+++..-. ...++|.+.+++.+.+... ...|...++..++++.+.+++.+.+|++  ++++.   +++|+++++
T Consensus        53 ~gnp~~~l~s~~-t~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~  130 (502)
T 3hbx_A           53 DGNPRLNLASFV-TTWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAI  130 (502)
T ss_dssp             SCCGGGBTTCCS-CCCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHH
T ss_pred             CCCCCceecccc-CCCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHH
Confidence            445555544322 2346889999999887653 3334455567889999999999999987  55544   489999999


Q ss_pred             HHHHHHhccC--------CC-----EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEE
Q 015890          103 VNIVLTLCDA--------GD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS  169 (398)
Q Consensus       103 ~~~~~~l~~~--------gd-----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~  169 (398)
                      ..++.++..+        |+     +|+++.++|..+...++..|++++.+ +.+++++.+|++.|++.+++++  ++|+
T Consensus       131 ~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~  207 (502)
T 3hbx_A          131 MLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEV-KLSEGYYVMDPQQAVDMVDENT--ICVA  207 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEE-CCBTTBCSCCHHHHHHHCCTTE--EEEE
T ss_pred             HHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEE-ecCCCcCcCCHHHHHHHHhhCC--EEEE
Confidence            9998887654        76     89999999999999999999999999 8876657899999999999765  8999


Q ss_pred             EeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEeece--ec--c-CC-CccccccCCcEEEEcccccccCCCcc
Q 015890          170 VVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTY--FM--Y-DG-RKHCCVEGDHVVNLFSFSKAYGMMGW  237 (398)
Q Consensus       170 i~~p~nptG~~~~~~~l~~i~~l~~~~------~~~livDe~~--~~--~-~~-~~~~~~~~~~~i~~~s~sK~~~~~G~  237 (398)
                      +++|+||||.+.|   +++|.++|+++      |+++++|++|  +.  + .+ ........+.+.+..|.+|+++ ++.
T Consensus       208 ~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~-~p~  283 (502)
T 3hbx_A          208 AILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYA  283 (502)
T ss_dssp             EEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCS
T ss_pred             EecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-CCC
Confidence            9999999999999   89999999999      9999999999  21  1 11 1111112345677889999884 567


Q ss_pred             eeEEEEccCCcHHHHHHHHHhh-cc---------CCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          238 RVGYIAYPSEVEGFATQLLKVQ-DN---------IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       238 r~G~i~~~~~~~~~~~~l~~~~-~~---------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      ++|+++.++  ++.+....... ..         ..++.+.....+...++.. +.+.+.++.++..++++++.+.|+++
T Consensus       284 g~G~~~~~~--~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~  361 (502)
T 3hbx_A          284 GIGWVIWRN--KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKT  361 (502)
T ss_dssp             SCEEEEESS--GGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeC--HHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            789888775  33321111110 00         0112222222333333332 23456788888889999999999999


Q ss_pred             CCCccccC-CccEEEEeeCCCCC-CChHHHHHHHHHhcCeEEecCCCC---CCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGG-EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       307 ~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +.+.+..+ ...+++.+.++... .+..++.+.|. ++||.+.....+   .....+||+++. .+.++++.+++.|+++
T Consensus       362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~  440 (502)
T 3hbx_A          362 ERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLR-RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKV  440 (502)
T ss_dssp             TCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHH-hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            86566655 44677777776421 34567888774 889987543222   123589999998 7899999999999999


Q ss_pred             HHHHhcc
Q 015890          381 LEELVKD  387 (398)
Q Consensus       381 ~~~~~~~  387 (398)
                      ++.+.+.
T Consensus       441 l~~l~~~  447 (502)
T 3hbx_A          441 MRELDEL  447 (502)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhC
Confidence            9887653

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.97  E-value=5.7e-30  Score=245.57  Aligned_cols=336  Identities=11%  Similarity=-0.006  Sum_probs=227.9

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcC---CCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI  105 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~---~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~  105 (398)
                      ++.+.|+.+... +.|+.+.+++.+.+..   .....|. ...+..++.+.+.+++.++++.++++|++++|++++++.+
T Consensus        66 ~~~iyld~~~~g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~  144 (465)
T 3e9k_A           66 ENAIYFLGNSLG-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLL  144 (465)
T ss_dssp             CBCEECBTTTSC-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHH
T ss_pred             CCeEEecCCccC-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHH
Confidence            457777776544 3355665555554421   1111111 1112223334444445555588889999999999999999


Q ss_pred             HHHhccCCC---EEEEeCCCCcChh----hHHHhcCcEE----EEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCC
Q 015890          106 VLTLCDAGD---SVVMFAPYYFNSY----MSFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNP  173 (398)
Q Consensus       106 ~~~l~~~gd---~Vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p  173 (398)
                      +.+++++|+   +|+++.|+|++..    ..++..|+++    +.+.+.+ +++.+|+++|++.++++ +++++|++++|
T Consensus       145 ~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~  223 (465)
T 3e9k_A          145 MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGV  223 (465)
T ss_dssp             HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESB
T ss_pred             HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCc
Confidence            999987655   5999999998743    3667788764    2331443 34578999999999732 23599999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +||||.+.+   +++|.++|+++|+++|+|++| .+.....  ....+.+++++|++|.++.+..++|+++++   ++++
T Consensus       224 ~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~~~--~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~---~~~~  295 (465)
T 3e9k_A          224 HFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVELY--LHDWGVDFACWCSYKYLNAGAGGIAGAFIH---EKHA  295 (465)
T ss_dssp             CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCC--HHHHTCCEEEECSSSTTCCCTTCCCEEEEC---GGGT
T ss_pred             ccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcCCc--hhhcCCCEEEECcccccccCCCceEEEEEc---HHHH
Confidence            999999999   899999999999999999999 4432221  112234588899999993223367898888   4554


Q ss_pred             HHHHHhhc-------------------------cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHhccC
Q 015890          253 TQLLKVQD-------------------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       253 ~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      +.+.....                         ....+++.....++.++++...+. +++.+++..++++++.+.|+++
T Consensus       296 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  375 (465)
T 3e9k_A          296 HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN  375 (465)
T ss_dssp             TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence            43321110                         011256677777777777653332 6778888888888888888763


Q ss_pred             ----------CCCccccCC----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHH
Q 015890          307 ----------GEGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDC  370 (398)
Q Consensus       307 ----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~  370 (398)
                                +++++..+.    .+.++++.++.   +..++.+.|. ++||.+..    ..+++||+++ +. .+.+++
T Consensus       376 ~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---~~~~l~~~L~-~~Gi~v~~----~~~~~iRis~~~~~~t~edi  447 (465)
T 3e9k_A          376 YGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---PNKDVFQELE-KRGVVCDK----RNPNGIRVAPVPLYNSFHDV  447 (465)
T ss_dssp             CC---------CEEECSCSSGGGBCSCEEEEECC---TTCCHHHHHH-TTTEECEE----ETTTEEEEBCCTTTCCHHHH
T ss_pred             ccccccccCCCCeEEeCCCCHhhcccEEEEEecC---CHHHHHHHHH-HCCEEEec----CCCCEEEEeCcccCCCHHHH
Confidence                      444666554    26677777762   3456777775 78999873    3578999998 44 789999


Q ss_pred             HHHHHHHHHHHHH
Q 015890          371 KAAADRLRRGLEE  383 (398)
Q Consensus       371 ~~~~~~l~~~~~~  383 (398)
                      +++++.|++++++
T Consensus       448 ~~~~~~l~~~l~~  460 (465)
T 3e9k_A          448 YKFTNLLTSILDS  460 (465)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988765

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.97  E-value=1.7e-28  Score=229.72  Aligned_cols=281  Identities=17%  Similarity=0.100  Sum_probs=206.4

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS  145 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~  145 (398)
                      ..++++.+++++    +.  +++++++|+++|++.++.+++++||+|+++.++|++....+    +..|.+++.+ +.+ 
T Consensus        68 ~~~l~~~la~~~----g~--~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~-  139 (392)
T 3qhx_A           68 RTALEAALAAVE----DA--AFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV-ALA-  139 (392)
T ss_dssp             HHHHHHHHHHHT----TC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE-CTT-
T ss_pred             HHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe-CCC-
Confidence            344555555554    54  36889999999999999999999999999999998876655    6778999988 553 


Q ss_pred             CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                           |++.+++++++++  ++|++++|+||||.+.+   +++|+++|+++|+++|+|++| ..+...+.   ..+.+++
T Consensus       140 -----d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~~~---~~~~di~  206 (392)
T 3qhx_A          140 -----DLDAVRAAIRPTT--RLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQPL---SLGADVV  206 (392)
T ss_dssp             -----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCGG---GGTCSEE
T ss_pred             -----CHHHHHHhhCCCC--eEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCChH---HhCCcEE
Confidence                 8999999998754  99999999999999999   999999999999999999999 43322221   2235588


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +.|++|.+|.+| +++||++.++  +++.+.+.......+.+.++..++++...++.    +..+.++..++..++.+.|
T Consensus       207 ~~S~sK~lg~~g~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~~~L  280 (392)
T 3qhx_A          207 LHSTTKYIGGHSDVVGGALVTND--EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVAEFL  280 (392)
T ss_dssp             EEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCccccCCCCCceEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHH
Confidence            999999998766 7899999885  67888887766656677788888887777765    4455666777777888888


Q ss_pred             ccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-------------
Q 015890          304 SPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------------  353 (398)
Q Consensus       304 ~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------  353 (398)
                      ++.+.+. +..|.                .+..+++.++........++..+ +..++.+..|+.+.             
T Consensus       281 ~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~  359 (392)
T 3qhx_A          281 AEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKT-NIFILAESLGSVESLIEHPSAMTHAST  359 (392)
T ss_dssp             HTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHC-SSSEECSCCCCSSCEEECGGGTSCGGG
T ss_pred             hcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhC-CCceECCCCCCCCceeeCccccccccc
Confidence            7765432 21110                15567788864222334455444 45677777776531             


Q ss_pred             -------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          354 -------CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       354 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                             .++.||+|++.   ++.+++++.|.+++
T Consensus       360 ~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al  391 (392)
T 3qhx_A          360 AGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL  391 (392)
T ss_dssp             BTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             CHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence                   24679999997   45555666666554

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.97  E-value=1.6e-28  Score=230.33  Aligned_cols=319  Identities=19%  Similarity=0.180  Sum_probs=225.9

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      .+++++..+.+.+  ++++.+++.+.+...   .|. +..+..++++.+++++.    .  +++++++|+++|+..++.+
T Consensus        22 ~~~~~l~~~~p~~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~----~--~~~i~~~~gt~al~~~l~~   90 (391)
T 3dr4_A           22 SDLPRISVAAPRL--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG----V--KHAIACNNGTTALHLALVA   90 (391)
T ss_dssp             ------CCCCCCC--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT----C--SEEEEESSHHHHHHHHHHH
T ss_pred             CCCceeccCCCCC--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC----C--CcEEEeCCHHHHHHHHHHH
Confidence            4678888887764  588899988877653   344 56778899999999883    3  3788999999999999999


Q ss_pred             h-ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          109 L-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       109 l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      + +++||+|+++.|+|+++...++..|.+++.+ +.+.+++.+|++.+++.+++++  ++|+   ++||||...+   ++
T Consensus        91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--~~v~---~~n~tG~~~~---~~  161 (391)
T 3dr4_A           91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLV-DNDPRTFNLDAAKLEALITPRT--KAIM---PVHLYGQICD---MD  161 (391)
T ss_dssp             HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGSGGGCCTTE--EEEC---CBCGGGCCCC---HH
T ss_pred             cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEE-ecCccccCcCHHHHHHhcCCCc--eEEE---EECCCCChhh---HH
Confidence            9 8999999999999999999999999999999 8876667889999999998654  7777   5689999988   89


Q ss_pred             HHHHHHHHcCCEEEEeece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015890          188 RISDLCKAAGSWLVVDNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI  262 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~  262 (398)
                      +|.++|+++|+++|+|++| +  .+.+...... .+  +++.|++  |.++  |.+.|+++.++  +.+.+.+.......
T Consensus       162 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-~d--i~~~S~s~~K~l~--~g~gg~~~~~~--~~~~~~~~~~~~~g  234 (391)
T 3dr4_A          162 PILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-GD--CATFSFFGNAIIT--TGEGGMITTND--DDLAAKMRLLRGQG  234 (391)
T ss_dssp             HHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SS--EEEEECBTTSSSC--CBSCEEEEESC--HHHHHHHHHHHBTT
T ss_pred             HHHHHHHHcCCEEEEECcccccceECCeeeccc-CC--EEEEECCCCCcCC--cCCeEEEEECC--HHHHHHHHHHHhcC
Confidence            9999999999999999999 3  2333221111 23  5556655  8775  45688988875  66777766544211


Q ss_pred             --------------CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-------CccEEEE
Q 015890          263 --------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-------EGAIYLW  321 (398)
Q Consensus       263 --------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------~~~~~~~  321 (398)
                                    .+..+....++....+    ..+++..++.+++.+++.+.|++.+. .+..+       .....++
T Consensus       235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~  309 (391)
T 3dr4_A          235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQL----ERVDEHLAARERVVGWYEQKLARLGN-RVTKPHVALTGRHVFWMYT  309 (391)
T ss_dssp             CCTTSTTCCSSCCCBCBCCHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHGGGTT-SEECCCCCTTSCCCCSSEE
T ss_pred             CCCCCcccccccccccCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCc-cccCcCCCCCCcceeEEEE
Confidence                          1223333333322222    23456667777788888888887733 44433       1122345


Q ss_pred             eeCCCC-CCChHHHHHHHHHhcCeEEecCCCC---C-----------------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          322 ARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---G-----------------CRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       322 ~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~---~-----------------~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      +.++.. ..+..++.+.|. ++||.++++...   .                 ....+|+++.. .+++|++++++.|++
T Consensus       310 i~~~~~~~~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~  388 (391)
T 3dr4_A          310 VRLGEGLSTTRDQVIKDLD-ALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ  388 (391)
T ss_dssp             EEECSSCSSCHHHHHHHHH-HTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred             EEECCccchhHHHHHHHHH-HCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence            566531 235778888775 789999988521   0                 12479999888 899999999999876


Q ss_pred             HH
Q 015890          380 GL  381 (398)
Q Consensus       380 ~~  381 (398)
                      ++
T Consensus       389 ~l  390 (391)
T 3dr4_A          389 VL  390 (391)
T ss_dssp             TC
T ss_pred             Hh
Confidence            53

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.97  E-value=1.4e-29  Score=239.96  Aligned_cols=326  Identities=14%  Similarity=0.101  Sum_probs=220.5

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ++++ .||++.+++.+++.+.....|     ..++++.+++.+.+.++ .+++|++++|+++|+.
T Consensus        49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~  122 (424)
T 2e7u_A           49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATM  122 (424)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence            3578899999875  3444 689999999999876322222     34566777777776665 5789999999999999


Q ss_pred             HHHHH---hccCCCEEEEeCCCCcChhhHHH-h-------------cCc------EEEEeccCCCCCCCCChHHHHHhhc
Q 015890          104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus       104 ~~~~~---l~~~gd~Vl~~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                      .+++.   +. ++++|++++|+|+++...+. .             .|+      .++.+ +.      .|++.|++.++
T Consensus       123 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~  194 (424)
T 2e7u_A          123 SALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL-EY------NDPEGLREVLK  194 (424)
T ss_dssp             HHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEE-CT------TCHHHHHHHHH
T ss_pred             HHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeC-CC------CCHHHHHHHHH
Confidence            99986   44 45889999999988654322 1             121      23333 21      38899999987


Q ss_pred             cC-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          161 TK-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       161 ~~-~~~~~v~i~~p~nptG~~~-~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      .. ..+++|+++..+++||.+. +++++++|.++ ++||+++|+||+|  + ..+........+....+.|+||.++ +|
T Consensus       195 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~-~G  271 (424)
T 2e7u_A          195 RRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILG-GG  271 (424)
T ss_dssp             HHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TT
T ss_pred             hCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhh-CC
Confidence            31 1135555543344589765 79999999999 9999999999999  5 3332211111011111338999998 69


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhh---ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG  309 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~  309 (398)
                      +|+||++++   +++++.+....   ...+++.|+++++++.++|+...+ .++..+++.++.+++.+.|++    .+..
T Consensus       272 ~~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  347 (424)
T 2e7u_A          272 LPAAAYAGR---REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLKEVLKEKGLP  347 (424)
T ss_dssp             SSCEEEEEC---HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             cceEEEEEc---HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            999999999   77777665421   234567788888888888874211 134455566666666666654    3543


Q ss_pred             ccccCCccEEEEeeCCCCC------------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      ....+. ++++|+.++...            ....++...|+ ++||.+.++.    ...+|+++. .+++++++++++|
T Consensus       348 ~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~~i~~~l~~l  420 (424)
T 2e7u_A          348 HTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN----FEAAFLSVA-HREEDVEKTLEAL  420 (424)
T ss_dssp             CEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS----SSCEECCTT-CCHHHHHHHHHHH
T ss_pred             eEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC----CCceEeecc-CCHHHHHHHHHHH
Confidence            333444 678888886411            12346777776 7999999875    235777755 5999999999999


Q ss_pred             HHH
Q 015890          378 RRG  380 (398)
Q Consensus       378 ~~~  380 (398)
                      .++
T Consensus       421 ~~~  423 (424)
T 2e7u_A          421 RKA  423 (424)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.97  E-value=4.9e-28  Score=226.53  Aligned_cols=286  Identities=22%  Similarity=0.189  Sum_probs=204.8

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  141 (398)
                      +.++..++++.+++++    +.+ +.|++++| ++++..++.++.++||+|+++.|+|++....    ++..|.+++.+ 
T Consensus        50 ~~~~~~~l~~~la~~~----~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-  122 (386)
T 1cs1_A           50 GNPTRDVVQRALAELE----GGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-  122 (386)
T ss_dssp             CCHHHHHHHHHHHHHH----TCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-
T ss_pred             CCccHHHHHHHHHHHh----CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEe-
Confidence            3445577888888887    443 55666554 8999999999999999999999999875443    36778898888 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGD  220 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~  220 (398)
                      +.+      |++.+++.+++++  ++|++++|+||||.+++   +++|.++|+++|+++|+||+| .......   ...+
T Consensus       123 ~~~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~  188 (386)
T 1cs1_A          123 DQG------DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQNP---LALG  188 (386)
T ss_dssp             CTT------CHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCG---GGGT
T ss_pred             CCC------CHHHHHHhhccCC--cEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---cccC
Confidence            542      8899999998654  99999999999999998   999999999999999999999 2221111   1235


Q ss_pred             cEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      .++++.|+||.++.+|.++ ||+++++  +++++.+......++.+.++..++++...++.    +....+...++.+.+
T Consensus       189 ~di~~~s~sK~~~~~~~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l  262 (386)
T 1cs1_A          189 ADLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAI  262 (386)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCcccccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHH
Confidence            6788999999998888886 9999884  47888887666554556677777776666653    445556667777777


Q ss_pred             HHHhccCCCCccc-c----------------CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-----------
Q 015890          300 REALSPLGEGAVK-G----------------GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-----------  351 (398)
Q Consensus       300 ~~~l~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-----------  351 (398)
                      .+.|++++.+... .                ...+.++.+.++.   ...++.. ++.++||.+++.+.           
T Consensus       263 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~l~~~gi~~~~~~~g~~~sl~~~~~  338 (386)
T 1cs1_A          263 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRR-FLGGLSLFTLAESLGGVESLISHAA  338 (386)
T ss_dssp             HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHH-HHHTCSSSEEBSCCCSSSCEEEEGG
T ss_pred             HHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHH-HHHhCCcceEcccCCCcceeeeccc
Confidence            7777765432111 0                0115556666653   2344555 45689999974211           


Q ss_pred             ----C----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          352 ----C----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       352 ----~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                          +          + .++++|++++.   ++.++.+++|.++++++.
T Consensus       339 ~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~~  384 (386)
T 1cs1_A          339 TMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN  384 (386)
T ss_dssp             GTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHhh
Confidence                0          1 24799999997   555666777777776654

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.97  E-value=2.3e-28  Score=229.59  Aligned_cols=280  Identities=19%  Similarity=0.180  Sum_probs=196.5

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~  143 (398)
                      +...++++.+++++    +.+  +.++++++++|+..++.+++++||+|+++.|+|+++...+    +..|.+++.+ +.
T Consensus        65 ~~~~~l~~~la~~~----g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~  137 (398)
T 1gc0_A           65 PTLNLLEARMASLE----GGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DM  137 (398)
T ss_dssp             HHHHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CT
T ss_pred             hHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CC
Confidence            34445555555554    543  5566666689999999999999999999999999877665    6678998888 54


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                      +      |++.+++.++++  +++|++++|+||||.+++   +++|.++|+++|+++|+|++| ....+.+.   ..+.+
T Consensus       138 ~------d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~~---~~~~d  203 (398)
T 1gc0_A          138 A------DLQALEAAMTPA--TRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRPL---ELGAD  203 (398)
T ss_dssp             T------CHHHHHHHCCTT--EEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCGG---GGTCS
T ss_pred             C------CHHHHHHhcCCC--CeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCCch---hhCce
Confidence            2      799999999875  499999999999999998   999999999999999999999 33222221   23456


Q ss_pred             EEEcccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 015890          223 VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII  299 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l  299 (398)
                      +++.|+||.++.+|.|+ |+++++   ++.++ .+...... .+.+.+++.++++...++.    +..+.+...++...+
T Consensus       204 ~~~~S~sK~~~~~~~~~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l  276 (398)
T 1gc0_A          204 LVVHSATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVL  276 (398)
T ss_dssp             EEEEETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHH
T ss_pred             EEEECCccccCCCCCCeEEEEEEC---hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence            88999999999888887 999988   56555 55555444 4566788888877777764    344555566666667


Q ss_pred             HHHhccCCCC--------------ccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CCC------C-
Q 015890          300 REALSPLGEG--------------AVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGA------C-  352 (398)
Q Consensus       300 ~~~l~~~~~~--------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~------~-  352 (398)
                      .+.|++++.+              .+..+   ..+.++.+.++.    ..+....++.+.|+.++.   |+.      + 
T Consensus       277 ~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~  352 (398)
T 1gc0_A          277 AEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPA  352 (398)
T ss_dssp             HHHHHTCTTEEEEEEC----------------CCTTEEEEEETT----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGG
T ss_pred             HHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC----CHHHHHHHHHhCCCceeccCCCCcceeeeccc
Confidence            7766654421              11111   125556667652    234455566788988876   321      1 


Q ss_pred             ---------------C-CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          353 ---------------G-CRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       353 ---------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                                     + .++.||+|++. .++++++.+.++|.+
T Consensus       353 ~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~  396 (398)
T 1gc0_A          353 SMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA  396 (398)
T ss_dssp             GTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence                           1 14799999998 444555555555543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=2.1e-28  Score=224.30  Aligned_cols=275  Identities=17%  Similarity=0.097  Sum_probs=194.0

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (398)
                      ++++.+++++    +.+ +.+ +++++++++..++.++.++||+|+++.|+|+++...+    +..|.+++.+ +.    
T Consensus         2 ~l~~~la~~~----g~~-~~i-~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~----   70 (331)
T 1pff_A            2 ALEGKIAKLE----HAE-ACA-ATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DM----   70 (331)
T ss_dssp             HHHHHHHHHH----TCS-EEE-EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT----
T ss_pred             hHHHHHHHHh----CCC-eEE-EeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEe-CC----
Confidence            5778888877    544 444 5555589999999999999999999999998876654    4589999888 54    


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~-~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                        .|++.+++.++++  +++|++++|+||||.+++   +++|.++|++ +|+++|+|++| .+....+.   ..+.++++
T Consensus        71 --~d~~~l~~~i~~~--~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~d~~~  140 (331)
T 1pff_A           71 --AVPGNIEKHLKPN--TRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTNPL---DLGVDIVV  140 (331)
T ss_dssp             --TSTTHHHHTCCTT--EEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCCGG---GGTCSEEE
T ss_pred             --CCHHHHHHhhcCC--CeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCChh---hcCCcEEE
Confidence              3788999999865  499999999999999998   9999999999 99999999999 32212111   23567899


Q ss_pred             cccccccCCCcce-eEEEEccCCcH-HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWR-VGYIAYPSEVE-GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       226 ~s~sK~~~~~G~r-~G~i~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      .|+||.++.+|.| +||++++   + ++++.+...... .+.+.+++.+.++...++.    ...+.+....+.+.+.+.
T Consensus       141 ~s~~K~~~~~~~r~~G~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~  213 (331)
T 1pff_A          141 HSATKYINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAEF  213 (331)
T ss_dssp             EETTTTTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred             EECccccCCCCCceEEEEEeC---cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHHHHHH
Confidence            9999999989999 7999998   6 888888877665 4556777777766666653    222223333333333333


Q ss_pred             hcc--------------CCCCccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC---------CC----
Q 015890          303 LSP--------------LGEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------AC----  352 (398)
Q Consensus       303 l~~--------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~----  352 (398)
                      +++              .+...+..+   ..+.++.+.+.    +..++.. +++++||.+++.+         .|    
T Consensus       214 l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~l~~~gI~~~~~s~g~~~sl~~~~~~~~  288 (331)
T 1pff_A          214 LHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKK-VLDNCHVVSLAVSLGGPESLIQHPASMT  288 (331)
T ss_dssp             HHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHH-HHHTCSSSEECSSCCSSSCEEECHHHHT
T ss_pred             HHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHH-HHHhCCCceeccCCCCcceeeecchhhc
Confidence            322              222222211   12556667765    3445555 4568999887653         11    


Q ss_pred             ------------C-CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          353 ------------G-CRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       353 ------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                                  + .++.+|++++. .++++++.+++.|.+
T Consensus       289 ~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~  329 (331)
T 1pff_A          289 HAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL  329 (331)
T ss_dssp             STTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             ccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence                        1 15799999998 566677776666654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=1.7e-28  Score=231.74  Aligned_cols=283  Identities=18%  Similarity=0.180  Sum_probs=201.1

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS  145 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~  145 (398)
                      ..++++.+++++    |.+ +.+++ ++++++++.++.+++++||+|+++.+.|++....    ++..|++++.+ +.+ 
T Consensus       116 ~~~l~~~lA~l~----g~~-~~v~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~-  187 (445)
T 1qgn_A          116 TVVLEEKISALE----GAE-STLLM-ASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DPA-  187 (445)
T ss_dssp             HHHHHHHHHHHH----TCS-EEEEE-SCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CSS-
T ss_pred             HHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC-
Confidence            345666666654    553 44555 5555999999999999999999999999876653    46679999988 542 


Q ss_pred             CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                           |+++|++.+++++ +++|++++|+||||.+.+   +++|+++|+++|+++|+|++| .++...+   ...+.+++
T Consensus       188 -----d~~~l~~ai~~~t-v~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~~---~~~g~Div  255 (445)
T 1qgn_A          188 -----DVGALELALNQKK-VNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQKA---LALGADLV  255 (445)
T ss_dssp             -----CHHHHHHHHHHSC-EEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCT---TTTTCSEE
T ss_pred             -----CHHHHHHHhccCC-CCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCCc---cccCCEEE
Confidence                 8999999998754 499999999999999999   899999999999999999999 4332211   22345688


Q ss_pred             EcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          225 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       225 ~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      +.|+||.+|..| .++|+++++   +++++.+.........+.++...+++...++.    +..+.+.+.+++.++.+.|
T Consensus       256 ~~S~sK~~gg~gd~~~G~l~~~---~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L  328 (445)
T 1qgn_A          256 LHSATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEIL  328 (445)
T ss_dssp             EECTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHH
T ss_pred             EECCcccccccccceEEEEEEC---HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Confidence            999999998544 468999998   78888776655433444555555555555553    4455566677788888888


Q ss_pred             ccCCCC-ccccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-------------
Q 015890          304 SPLGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------------  353 (398)
Q Consensus       304 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------  353 (398)
                      ++.+.+ .+..|                ..+.++++.++....+...++..+ +..++.++.|..+.             
T Consensus       329 ~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~  407 (445)
T 1qgn_A          329 EAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDL  407 (445)
T ss_dssp             HTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCSSSCEEECHHHHHSTTS
T ss_pred             hcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhC-CCceEeccCCCCceeeecccccccccC
Confidence            887654 33332                135677778763111123333332 22367777776542             


Q ss_pred             ----------CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          354 ----------CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 ----------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                .++.||+|++.   |+++.+++.|.++++.
T Consensus       408 ~~~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~  444 (445)
T 1qgn_A          408 SQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS  444 (445)
T ss_dssp             CHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             CHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence                      14689999994   6799999999988864

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.96  E-value=4.5e-28  Score=230.62  Aligned_cols=361  Identities=15%  Similarity=0.120  Sum_probs=235.3

Q ss_pred             HhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHHHhh
Q 015890           10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKKLNQ   83 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~l~~   83 (398)
                      ++...+.+.+..+.+......+.+.|..+.+.  ++|.|++++...+.+....+|+.      .....++++..++++++
T Consensus        34 ~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~  111 (490)
T 2a7v_A           34 SLSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE  111 (490)
T ss_dssp             CHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHcCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence            44456666676666666555677888875544  68999999998876543233432      12234677666677888


Q ss_pred             hcCCCCCc---EEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh--------HHHhcCc--EEEEeccCCCCCCCC
Q 015890           84 ENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--------SFQMTGV--THILVGPCSSKTLHP  150 (398)
Q Consensus        84 ~~~~~~~~---v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~  150 (398)
                      ++|.+.+.   .++++|+++|+..++.+++++||+|+++.+.|.++..        .+...|.  +++.+ +.+++++.+
T Consensus       112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~-~vd~~~~~i  190 (490)
T 2a7v_A          112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI  190 (490)
T ss_dssp             HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred             HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec-ccccccCCc
Confidence            88887653   3556688999999999999999999999998865421        2233453  44455 555555789


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s  227 (398)
                      |+|++++.++... +++|++..++||+  ..+   +++|.++|+++|+++++|++|   +.+.+....... ..++++.|
T Consensus       191 D~d~le~~l~~~~-~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv~~S  263 (490)
T 2a7v_A          191 DYNQLALTARLFR-PRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIVTTT  263 (490)
T ss_dssp             CHHHHHHHHHHHC-CSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEE
T ss_pred             CHHHHHHHHhhcC-CcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-CCCEEEEC
Confidence            9999999997422 4898888888864  566   999999999999999999998   233333222222 24588899


Q ss_pred             cccccCCCcceeEEEEccCCcH------------HHHHHHHHhhcc-CCCCcchHHHHHHHHHhcCC-chHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQDN-IPICASIISQHLALYSLQTG-PEWVTERVKDLV  293 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~  293 (398)
                      +||.++  |.+.|++++++.+.            ++.+.++..... ...+++...++++..++... .+.++++.++..
T Consensus       264 ~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~  341 (490)
T 2a7v_A          264 THKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL  341 (490)
T ss_dssp             SSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            999984  66779999885310            245555544322 22344555555555555431 234577888899


Q ss_pred             HHHHHHHHHhccCCCCcccc-CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC---
Q 015890          294 RNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG---  364 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~---  364 (398)
                      ++++++.+.|.+.|. .+.. +...+++|+++.....+..++... |++.||.+..+..++     .++.||++...   
T Consensus       342 ~na~~L~~~L~~~G~-~v~~~~t~t~lv~vdl~~~g~~~~~~~~~-L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~  419 (490)
T 2a7v_A          342 KNARAMADALLERGY-SLVSGGTDNHLVLVDLRPKGLDGARAERV-LELVSITANKNTCPGDRSAITPGGLRLGAPALTS  419 (490)
T ss_dssp             HHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECTTTTCCHHHHHHH-HHHTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred             HHHHHHHHHHHHcCc-EEecCCCCCeEEEEEeCCCCCCHHHHHHH-HHhCCeEEecCccCCCCCCCCCCceEeccccccc
Confidence            999999999988765 5543 344678888886544456666554 468999998654332     25789997532   


Q ss_pred             --CCHHHHHHHHHHHHHHHHHH
Q 015890          365 --LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       365 --~~~~~~~~~~~~l~~~~~~~  384 (398)
                        .+++|++++++.|.+++...
T Consensus       420 ~g~~~~d~~~~~~~i~~~l~~~  441 (490)
T 2a7v_A          420 RQFREDDFRRVVDFIDEGVNIG  441 (490)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhh
Confidence              47899999999999888643

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.96  E-value=1e-28  Score=229.55  Aligned_cols=302  Identities=17%  Similarity=0.197  Sum_probs=223.6

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY  122 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~  122 (398)
                      .++++.+++.+.+...   .|.+.++..++++.+++++    +.  +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus        14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~   84 (367)
T 3nyt_A           14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV----GA--KYCISCANGTDALQIVQMALGVGPGDEVITPGFT   84 (367)
T ss_dssp             HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCc
Confidence            4678888888877653   3556677888999999988    33  47999999999999999999 8999999999999


Q ss_pred             CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      |+++...++..|.+++.+ +.+++.+.+|++.+++.+++++  ++|+   |+||+|...+   +++|.++|+++|+++|+
T Consensus        85 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~  155 (367)
T 3nyt_A           85 YVATAETVALLGAKPVYV-DIDPRTYNLDPQLLEAAITPRT--KAII---PVSLYGQCAD---FDAINAIASKYGIPVIE  155 (367)
T ss_dssp             CTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEE
T ss_pred             cHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHhcCcCC--cEEE---eeCCccChhh---HHHHHHHHHHcCCEEEE
Confidence            999999999999999999 8887767899999999997654  7777   7789999888   99999999999999999


Q ss_pred             eece-e--ccCCCccccccCCcEEEEccc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCCC
Q 015890          203 DNTY-F--MYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC  265 (398)
Q Consensus       203 De~~-~--~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~------------~~~~  265 (398)
                      |++| +  .+.+...... +  ++++.|+  +|.++.+|. .|+++.++  +++.+.+......            .++.
T Consensus       156 D~a~~~g~~~~~~~~~~~-~--di~~~Sf~~~K~l~~~g~-gg~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~g~~~~  229 (367)
T 3nyt_A          156 DAAQSFGASYKGKRSCNL-S--TVACTSFFPSAPLGCYGD-GGAIFTND--DELATAIRQIARHGQDRRYHHIRVGVNSR  229 (367)
T ss_dssp             ECTTTTTCEETTEETTSS-S--SEEEEECCTTSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTEEETTEECSCCCBCC
T ss_pred             ECccccCCeECCeeccCC-C--CEEEEECCCCCcCCCcCc-eeEEEeCC--HHHHHHHHHHHhcCCCcCceeeccCcCCC
Confidence            9998 3  3333322222 1  4777786  899985576 78888865  7788777665431            2455


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCcc----EEEEeeCCCCCCChHHHHHHHHH
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGA----IYLWARLPEKHLDDFEVVRWLAH  340 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~ll~  340 (398)
                      .+....+++...++.    +++..++.+++.+++.+.|++.+. .+. .+.+.    ..+.+.++    +..++...| +
T Consensus       230 ~~~~~aa~~~~~l~~----~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~  299 (367)
T 3nyt_A          230 LDTLQAAILLPKLEI----FEEEIALRQKVAAEYDLSLKQVGI-GTPFIEVNNISVYAQYTVRMD----NRESVQASL-K  299 (367)
T ss_dssp             CCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTEECCCSSEEEECS----SHHHHHHHH-H
T ss_pred             ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCe-eccCCCCCCceeeEEEEEEeC----CHHHHHHHH-H
Confidence            666666666666654    345555666667777777777653 222 12211    22334443    466777766 5


Q ss_pred             hcCeEEecCCCC--------C-C-----------CCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          341 RHGVVVIPGGAC--------G-C-----------RGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       341 ~~gi~v~~g~~~--------~-~-----------~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      ++||.++++...        . .           ...+|+++.. .+++|+++.++.|++
T Consensus       300 ~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~  359 (367)
T 3nyt_A          300 AAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN  359 (367)
T ss_dssp             HHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred             HCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence            889999876531        0 0           2479999888 899999988888764

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.96  E-value=4.8e-29  Score=232.72  Aligned_cols=324  Identities=12%  Similarity=0.106  Sum_probs=230.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY  123 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~  123 (398)
                      ++|++++++...+.+...+.  ......++.+.+++.+.+.++.+ +.+++++|+|++++.++..+ ++||+|+++.++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~h--~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~   84 (379)
T 3ke3_A            9 IDPNGLLEYSVVYTDRALNH--MSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGW   84 (379)
T ss_dssp             CSTTSCCCCCSSCCTTSCCT--TSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSH
T ss_pred             CCHHHHHHHHHhccCCCCCC--CCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCc
Confidence            45666666655444433222  23344567777788887777876 67999999999999988654 6899999999999


Q ss_pred             cChh--hHHHhcC--cEEEEeccCCCCC--------CCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          124 FNSY--MSFQMTG--VTHILVGPCSSKT--------LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       124 ~~~~--~~~~~~g--~~~~~~~~~~~~~--------~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      ++..  ..++..|  .+++.+ +.+..+        ..+|++++++.++ ++  +++|++.+++|++|.++|.+++++|.
T Consensus        85 ~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~--~~~v~~~~~~~~~G~~~~~~~l~~i~  161 (379)
T 3ke3_A           85 FSYRWTQILEKGKFAKSSTVL-TAERTEDTEAPKPFAPVDIETAVAKIKEDK--SAIVYAPHVETSSGIILSEEYIKALS  161 (379)
T ss_dssp             HHHHHHHHHHHHCCSSEEEEE-ECEESSCCSSCCCEECCCHHHHHHHHHHHT--CSEEEEESEETTTTEECCHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCceEEE-eccccccccccCCCCCCCHHHHHHHHhhcC--CcEEEEEeecCCCceeCCHHHHHHHH
Confidence            7743  4455566  477777 553311        2479999999996 34  48999999999999999999999999


Q ss_pred             HHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------
Q 015890          191 DLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-----------  259 (398)
Q Consensus       191 ~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-----------  259 (398)
                      ++|+++|+++|+|+++.  .+.+......+.++++.|++|+++ ++.++|+++++   +++++.+....           
T Consensus       162 ~~~~~~~~~li~D~~~~--g~~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~l~~~~~~~~~~~~~~~  235 (379)
T 3ke3_A          162 EAVHSVGGLLVIDCIAS--GCVWLDMKELGIDVLISAPQKGWS-STPCAGLVMLS---AAAIKKVESTESNCFSLDLKQW  235 (379)
T ss_dssp             HHHHHTTCEEEEECTTC--TTCCCCHHHHTCSEEEECTTTTTC-SCCCEEEEEEC---HHHHHHHHTCCCSCSTTCHHHH
T ss_pred             HHHHHcCCEEEEEeccc--CCccccccccCCCEEEecchhhcC-CCCceEEEEEC---HHHHHhhhcCCCCceeecHHHH
Confidence            99999999999999974  233222222245588899999986 33458999998   77777765311           


Q ss_pred             --------c---cCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccEEEEeeC
Q 015890          260 --------D---NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARL  324 (398)
Q Consensus       260 --------~---~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~~~~  324 (398)
                              .   .+.++.+.+.++++.++++...+ .+++..++.+++++++++.|++++. .+..+.   ......+..
T Consensus       236 ~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~  314 (379)
T 3ke3_A          236 LTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGI-ESVAAEGFEAPGVVVSYT  314 (379)
T ss_dssp             HHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSBCTTCBCSSEEEEEC
T ss_pred             HHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC-EecCCccccCceEEEEcc
Confidence                    0   01237788888888888875222 2577788888899999999988865 444332   122233333


Q ss_pred             CCCCCChHHHHHHHHHhcCeEEecCCCCCC-----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          325 PEKHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       325 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.   ........| .++||.+.+|..|..     .+.+||+++. .+++|+++++++|+++++++.
T Consensus       315 ~~---~~~~~~~~L-~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          315 ER---DDMHKGSAF-AEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             SC---HHHHSSHHH-HHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CC---cchHHHHHH-HHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            31   122224444 588999999876532     6789999987 788999999999999998765

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.96  E-value=1.2e-27  Score=223.82  Aligned_cols=281  Identities=16%  Similarity=0.169  Sum_probs=200.3

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEecc
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGP  142 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~  142 (398)
                      .+...++++.+++++    +.+  +.++++|+++|+..++.+++++||+|+++.|+|++....    ++..|.+++.+ +
T Consensus        58 ~~~~~~l~~~la~~~----g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~  130 (389)
T 3acz_A           58 NPTVEQFEEMVCSIE----GAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI-D  130 (389)
T ss_dssp             CHHHHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE-C
T ss_pred             ChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C
Confidence            334456666666665    543  566777788999999999999999999999999886655    57789999988 5


Q ss_pred             CCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCc
Q 015890          143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       143 ~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                      .      .|++.+++.+++++  ++|++++|+||||.+.+   +++|.++|+++|+++|+|++| ..+...+.   ..+.
T Consensus       131 ~------~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~~~---~~~~  196 (389)
T 3acz_A          131 T------SDVEKVKAAWKPNT--KMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLKPL---ELGA  196 (389)
T ss_dssp             T------TCHHHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCGG---GTTC
T ss_pred             C------CCHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccCcc---ccCC
Confidence            4      38999999998754  99999999999999999   999999999999999999999 33322222   2346


Q ss_pred             EEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|++|.++.+|.|+ ||+++++  +++++.+.........+.++..++++...++.    +..+.+...++...+.
T Consensus       197 di~~~S~sK~~~~~~~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~~~~l~  270 (389)
T 3acz_A          197 DIALHSVSKYINGHGDVIGGVSSAKT--AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT----LPIRMQIHMENGLKVA  270 (389)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred             eEEEECChhhccCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH----HHHHHHHHHHHHHHHH
Confidence            688999999999899998 9999983  27888777665434555677777777777764    2333444445555555


Q ss_pred             HHhccCCC--------------CccccC---CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---C------CCCC-
Q 015890          301 EALSPLGE--------------GAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G------GACG-  353 (398)
Q Consensus       301 ~~l~~~~~--------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g------~~~~-  353 (398)
                      +.|++.+.              ..+..+   ..+.++.+.++.     .+....++.+.||.+++   |      ..|. 
T Consensus       271 ~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-----~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~  345 (389)
T 3acz_A          271 KFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-----FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPAS  345 (389)
T ss_dssp             HHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-----HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTT
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-----HHHHHHHHHhCCCcEECcCCCCcccEeeCCcc
Confidence            55544321              111111   114556667652     23444566788998877   3      2221 


Q ss_pred             ----------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          354 ----------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       354 ----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                                      .++.||+|++.   ++.+++++.|.++++
T Consensus       346 ~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~  387 (389)
T 3acz_A          346 MTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE  387 (389)
T ss_dssp             TTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence                            14799999997   366677777777764

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.96  E-value=1.7e-28  Score=228.70  Aligned_cols=308  Identities=14%  Similarity=0.150  Sum_probs=220.3

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY  122 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~  122 (398)
                      .++++.+++.+.+...   .|.+..+..++++.+++++.    .  +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus        15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~----~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~   85 (373)
T 3frk_A           15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN----V--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNT   85 (373)
T ss_dssp             HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT----S--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTS
T ss_pred             CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC----C--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence            4678888888877653   35567778899999999883    3  47999999999999999999 8999999999999


Q ss_pred             CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      |+++...++..|++++.+ +.+++++.+|++++++.+++++  ++|+   ++||||...+   +++|.++|+++|+++|+
T Consensus        86 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~--~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~  156 (373)
T 3frk_A           86 FIATALAVSYTGAKPIFV-EPDIRTYNIDPSLIESAITEKT--KAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIE  156 (373)
T ss_dssp             CTHHHHHHHHHSCEEEEE-CEETTTTEECGGGTGGGCCTTE--EEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEE
T ss_pred             cHHHHHHHHHcCCEEEEE-eccccccCcCHHHHHHhcCCCC--eEEE---EECCCcCccc---HHHHHHHHHHcCCEEEE
Confidence            999999999999999999 8776667889999999998754  7777   6789999998   88999999999999999


Q ss_pred             eece-e--ccCCCccccccCCcEEEEcccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCCC
Q 015890          203 DNTY-F--MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC  265 (398)
Q Consensus       203 De~~-~--~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~------------~~~~  265 (398)
                      |++| +  .+++...... .  ++++.|++  |.++.+| +.|+++.++  +++.+.+......            .++.
T Consensus       157 D~a~~~g~~~~~~~~~~~-~--d~~~~S~~~~K~l~~~g-~gg~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~g~~~~  230 (373)
T 3frk_A          157 DAAQAHGSLYKGMKVGSL-G--DAAGFSFYPAKNLGSLG-DGGAVVTND--KDLAEKIKALSNYGSEKKYHHIYKGFNSR  230 (373)
T ss_dssp             ECTTCTTCEETTEETTSS-S--SEEEEECCTTSSSCCSS-SCEEEEESC--HHHHHHHHHHHBTTCSBTTBCCSCCCBCC
T ss_pred             ECCcccCCEECCEecccc-c--cEEEEeCcCCCccCccc-eeEEEEeCC--HHHHHHHHHHHhcCcccCCccccccccCC
Confidence            9999 3  2333222211 2  36677766  9987424 378888875  5677777654431            1222


Q ss_pred             cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-CccEEEE--eeCCCCCCChHHHHHHHHHhc
Q 015890          266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLW--ARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      .+....++....++    .+++..++.+++.+++.+.|++++ +.+... .+....+  +.+..  .+..++...|. ++
T Consensus       231 ~~~~~aa~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~-~~  302 (373)
T 3frk_A          231 LDELQAGFLRVKLK----YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS--EKRDELQKYLN-NN  302 (373)
T ss_dssp             CCHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE--SSHHHHHHHHH-HT
T ss_pred             CCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe--CCHHHHHHHHH-HC
Confidence            34444443333333    245666777788888999998876 344321 2121111  11111  14667777764 78


Q ss_pred             CeEEecCCCCC---C--------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          343 GVVVIPGGACG---C--------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       343 gi~v~~g~~~~---~--------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ||.++++....   .                    .+.+|++++. .+++|++++++.|++...+
T Consensus       303 gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~  367 (373)
T 3frk_A          303 GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE  367 (373)
T ss_dssp             TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred             CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence            99998765210   0                    1579999998 8999999999998876544

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=5.5e-27  Score=221.13  Aligned_cols=301  Identities=20%  Similarity=0.133  Sum_probs=206.2

Q ss_pred             CCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           42 WQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        42 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      ++.++.+.+++.   .. ..+.|+..  +...++++.+++++    +.  +++++++|+++|++.++.+++++||+|+++
T Consensus        32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~al~~l~~~gd~vi~~  101 (412)
T 2cb1_A           32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALE----GA--LEAVVLASGQAATFAALLALLRPGDEVVAA  101 (412)
T ss_dssp             CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEe
Confidence            344455555443   22 23556543  34556666666665    53  479999999999999999999999999999


Q ss_pred             CCCCcChhhH----HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015890          120 APYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA  195 (398)
Q Consensus       120 ~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~  195 (398)
                      .|+|++....    ++..|.+++.+ +.       |+++|++.+++++  ++|++++|+||||.+.+   +++|.++|++
T Consensus       102 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~-------~~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~l~~~  168 (412)
T 2cb1_A          102 KGLFGQTIGLFGQVLSLMGVTVRYV-DP-------EPEAVREALSAKT--RAVFVETVANPALLVPD---LEALATLAEE  168 (412)
T ss_dssp             TTCCHHHHHHHHHTTTTTTCEEEEE-CS-------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHcCCEEEEE-CC-------CHHHHHHHhccCC--eEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence            9999876554    34578899888 54       3889999998754  99999999999999998   9999999999


Q ss_pred             cCCEEEEeece-ec-cCCCccccccCCcEEEEcccccccCCCcceeEEEEccC-CcH-----------------------
Q 015890          196 AGSWLVVDNTY-FM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS-EVE-----------------------  249 (398)
Q Consensus       196 ~~~~livDe~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~-~~~-----------------------  249 (398)
                      +|+++|+|++| .. +...+   ...+.++++.|+||.++.+|.|+|+++..+ ...                       
T Consensus       169 ~~~~li~D~~~~~~~~~~~~---~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  245 (412)
T 2cb1_A          169 AGVALVVDNTFGAAGALCRP---LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRA  245 (412)
T ss_dssp             HTCEEEEECGGGTTTTSCCG---GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGG
T ss_pred             cCCEEEEECCCccccccCCc---cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccch
Confidence            99999999999 33 32221   123466889999999988999999987654 210                       


Q ss_pred             -HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cC------------
Q 015890          250 -GFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GG------------  314 (398)
Q Consensus       250 -~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~------------  314 (398)
                       ++.+.++... .......++...+.+...++.    +.++.++..++.+++.+.|.+.+.+... .|            
T Consensus       246 ~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~  321 (412)
T 2cb1_A          246 RCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNAR  321 (412)
T ss_dssp             GHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHH
Confidence             3444454433 212233445544444445543    3455556677888888888887665533 22            


Q ss_pred             ----CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCC---------CCC-----------------CCCeEEEEecC
Q 015890          315 ----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------ACG-----------------CRGHLRISFGG  364 (398)
Q Consensus       315 ----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~~-----------------~~~~iRi~~~~  364 (398)
                          ..+.++.+.+ .   +...+.. ++++.||.+ .++         .|.                 .++.||+|++.
T Consensus       322 ~~~~~~~~iv~~~~-~---~~~~~~~-~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~  395 (412)
T 2cb1_A          322 KYLASGGPILTLDL-G---DLERASR-FLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGL  395 (412)
T ss_dssp             HHCSSSCSEEEEEC-S---SHHHHHH-HHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCS
T ss_pred             HhCCCCceEEEEEe-C---CHHHHHH-HHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence                1245666777 3   3444444 556889999 764         221                 15789999998


Q ss_pred             -CCHHHHHHHHHHHH
Q 015890          365 -LVEDDCKAAADRLR  378 (398)
Q Consensus       365 -~~~~~~~~~~~~l~  378 (398)
                       .++++++.+.++|.
T Consensus       396 ~~~~~~i~~l~~al~  410 (412)
T 2cb1_A          396 EDPLDLLALFEEALE  410 (412)
T ss_dssp             SCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHh
Confidence             55556666666554

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.96  E-value=3.1e-28  Score=228.90  Aligned_cols=325  Identities=11%  Similarity=0.030  Sum_probs=219.1

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE-ecChHHHHHHHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQAFVNIVL  107 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~-~~g~t~a~~~~~~  107 (398)
                      ++.++|+.|  +.++|+.+++++.+... .....+...+...++.+.+.+.+++.+|++ +++|++ ++|++++++.++.
T Consensus        39 ~~~~~~~~~--~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~  115 (398)
T 2fyf_A           39 PRDGRFGSG--PSKVRLEQLQTLTTTAA-ALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAF  115 (398)
T ss_dssp             CSSCBCCSS--SCCCCHHHHHGGGTTTT-TTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHH
T ss_pred             cCCccccCC--CCCCCHHHHHHHhhcCC-CccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHH
Confidence            345666654  44678999999877311 111100111222345667777777777886 468998 9999999999999


Q ss_pred             HhccCCCEEEEeCCCCcC-hhhHHHhc--CcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          108 TLCDAGDSVVMFAPYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       108 ~l~~~gd~Vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                      +++++| .+.+..+.|.. ....+...  |.+++.+ +.+ ++...+.     .++++  +++|++++|+||||.++|.+
T Consensus       116 ~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~g~~~~~-----~i~~~--~~~v~~~~~~nptG~~~~~~  185 (398)
T 2fyf_A          116 GLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIII-TSD-PGSAPEP-----QTDPS--VDVIAWAHNETSTGVAVAVR  185 (398)
T ss_dssp             HTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE-ECC-TTCCCCC-----CCCTT--CSEEEEESEETTTTEECCCC
T ss_pred             HhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE-ecC-CCCCCCc-----cccCC--CCEEEEeCcCCCcceecchH
Confidence            998886 22333333311 12235555  7777777 666 4443332     14444  59999999999999999954


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----  259 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~----  259 (398)
                      ++   .++   +|+++|+|++| .......  ..  +.+++++|+||++|++| ++||++++   +++++.+....    
T Consensus       186 ~i---~~~---~~~~vivD~a~~~~~~~~~--~~--~~di~~~s~sK~~~~~g-g~g~l~~~---~~~~~~l~~~~~~~~  251 (398)
T 2fyf_A          186 RP---EGS---DDALVVIDATSGAGGLPVD--IA--ETDAYYFAPQKNFASDG-GLWLAIMS---PAALSRIEAIAATGR  251 (398)
T ss_dssp             CC---TTC---C-CEEEEECTTTTTTSCCC--GG--GCSEEEECTTSTTCSCS-SEEEEEEC---HHHHHHHHHHHHTTC
T ss_pred             Hh---hhh---cCCeEEEEeccccCCcccC--cc--cCcEEEEecCcccCCCC-ceEEEEEC---HHHHHHhhcccccCC
Confidence            44   443   89999999999 3322111  11  13478899999999765 58999998   77777664321    


Q ss_pred             -----------------ccCCCCcchHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHHHHHhccCCCCcccc--C--Cc
Q 015890          260 -----------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKG--G--EG  316 (398)
Q Consensus       260 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~--~~  316 (398)
                                       .....+.+...+.++..+++...+.  +++..++++++++++.+.|++++++++..  +  .+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  331 (398)
T 2fyf_A          252 WVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRS  331 (398)
T ss_dssp             CCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBC
T ss_pred             CCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcC
Confidence                             1223456777777777777642222  67788888999999999998875545553  3  23


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +.++++.++.+ .+..++.++|. ++||.+++|......+++||+++. .+++++++++++|++++++
T Consensus       332 ~~~~~~~~~~~-~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          332 QVVGTIDFVDD-VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER  397 (398)
T ss_dssp             SSEEEEEECTT-SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCC-CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            34888888653 36778888886 669999987433235799999996 6899999999999988754

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.96  E-value=1.1e-27  Score=222.86  Aligned_cols=324  Identities=14%  Similarity=0.134  Sum_probs=227.4

Q ss_pred             cCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH-HHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccC
Q 015890           35 LAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL-VKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDA  112 (398)
Q Consensus        35 l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l-~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~  112 (398)
                      ...+.|++++++++++++.+.+..+....|  .+...++++++ ++++    + ..+++++++|+|+++..++.++ +++
T Consensus         5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~----g-~~~~~v~~~sgt~al~~al~~l~~~~   77 (377)
T 3ju7_A            5 IPFLRASTVPVIEYLDELKEIDASHIYTNY--GPINQRFEQTIMSGFF----Q-NRGAVTTVANATLGLMAAIQLKKRKK   77 (377)
T ss_dssp             BCSCCCCCCCGGGGHHHHHHHHHHTCCSSS--CHHHHHHHHHHHHHTS----T-TCSEEEEESCHHHHHHHHHHHHSCTT
T ss_pred             eeccCCCCCCcHHHHHHHHHHHHcCCcccC--CHHHHHHHHHHHHHHh----C-CCCeEEEeCCHHHHHHHHHHHcCCCC
Confidence            345678888899999999998876432212  34457788888 7776    4 2467899999999999999998 899


Q ss_pred             CCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       113 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l-~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      ||+|+++.++|..+...++..|++++.+ +.+.+++.+|++.+++++ +++..+++|+   |+||+|...+   +++|.+
T Consensus        78 Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~  150 (377)
T 3ju7_A           78 GKYALMPSFTFPATPLAAIWCGLEPYFI-DISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEE  150 (377)
T ss_dssp             CCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHH
T ss_pred             cCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHH
Confidence            9999999999999999999999999999 887667889999999998 5541137776   6788999998   888999


Q ss_pred             HHHHcCCEEEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015890          192 LCKAAGSWLVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-------  261 (398)
Q Consensus       192 l~~~~~~~livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-------  261 (398)
                      +|+ +|+++|+|++| ++  +.+........+..++..+.+|.++. | +.|+++.++  +++.+++......       
T Consensus       151 la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~-g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~  225 (377)
T 3ju7_A          151 LEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGI-G-EGGLIYSKN--EEDIQRIKRMGNFGFDTNRE  225 (377)
T ss_dssp             HHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCC-B-SCEEEEESC--HHHHHHHHHHTBTTBCTTSC
T ss_pred             HHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCC-C-CcEEEEECC--HHHHHHHHHHHhcCCCCCCc
Confidence            999 99999999999 33  23322211112333444455799974 4 578888776  7888887766542       


Q ss_pred             -----CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc-ccCCc---c--EEEEeeCCCCCCC
Q 015890          262 -----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEG---A--IYLWARLPEKHLD  330 (398)
Q Consensus       262 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~---~--~~~~~~~~~~~~~  330 (398)
                           ..+.++....+.+...++.    +....++.+++++++.+.|++++.+.. ..+..   .  .|+.+.++.. .+
T Consensus       226 ~~~~g~~~~~~~~~aa~~~~~l~~----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  300 (377)
T 3ju7_A          226 CTMMGFNCKMSEYAAAIGIATMKK----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE-VR  300 (377)
T ss_dssp             BCSSCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-SC
T ss_pred             eeeccccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-hh
Confidence                 2344555555555555543    455666667777777777777654211 11111   1  2344555532 24


Q ss_pred             hHHHHHHHHHhcCeEEecCC--CCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          331 DFEVVRWLAHRHGVVVIPGG--ACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~--~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..++.+.| +++||.++.+.  .++.                   ...||+.++. .+++|+++.++.|.+++..
T Consensus       301 ~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~  374 (377)
T 3ju7_A          301 NKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS  374 (377)
T ss_dssp             HHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred             HHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            66777776 58899998775  2210                   2479999888 8999999999999877654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.96  E-value=1.1e-28  Score=237.01  Aligned_cols=324  Identities=13%  Similarity=0.076  Sum_probs=213.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC-----C----CEE
Q 015890           46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----G----DSV  116 (398)
Q Consensus        46 ~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~-----g----d~V  116 (398)
                      |++.+++.+.+... ...|++..+..++++.+++++    +  .+++++++|+++|+..++.+++++     |    |+|
T Consensus        53 ~~v~~a~~~~l~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~I  125 (467)
T 2oqx_A           53 GAVTQSMQAAMMRG-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMV  125 (467)
T ss_dssp             SCCCHHHHHHTTSC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCE
T ss_pred             HHHHHHHHHHhccC-cceeccCchhHHHHHHHHHHh----C--cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceE
Confidence            88888888887653 346777777888999999987    3  368999999999999999999887     8    898


Q ss_pred             EEeCCCCcChhhHHHhcCcEEEEecc---CCC-----CCCCCChHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHH
Q 015890          117 VMFAPYYFNSYMSFQMTGVTHILVGP---CSS-----KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERL  185 (398)
Q Consensus       117 l~~~p~~~~~~~~~~~~g~~~~~~~~---~~~-----~~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt-G~~~~~~~  185 (398)
                      ++..+.|..+.......|..++....   .+.     ..+.+|+++|++++++.  .++++|++++|+||+ |.+++.++
T Consensus       126 i~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~  205 (467)
T 2oqx_A          126 AFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLAN  205 (467)
T ss_dssp             EEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHH
T ss_pred             EecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHH
Confidence            77632223334445556666554301   111     23467999999999841  125999999999998 89999999


Q ss_pred             HHHHHHHHHHcCCEEEEeece-e-----------ccCCCcccc------ccCCcEEEEcccccccCCC-cceeEEEEccC
Q 015890          186 LKRISDLCKAAGSWLVVDNTY-F-----------MYDGRKHCC------VEGDHVVNLFSFSKAYGMM-GWRVGYIAYPS  246 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~-~-----------~~~~~~~~~------~~~~~~i~~~s~sK~~~~~-G~r~G~i~~~~  246 (398)
                      +++|+++|++||+++|+|+++ +           .+.+.....      ...+  +++.|+||.+|++ |   ||+++++
T Consensus       206 l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~  280 (467)
T 2oqx_A          206 LKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKD  280 (467)
T ss_dssp             HHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECS
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecC
Confidence            999999999999999999766 4           344432211      1122  4578999999866 4   7888774


Q ss_pred             C-cHHHHHHHHHhh---cc-C-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEE
Q 015890          247 E-VEGFATQLLKVQ---DN-I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL  320 (398)
Q Consensus       247 ~-~~~~~~~l~~~~---~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  320 (398)
                      . .-+.+..+....   .. . ....+.....++...++...+  ++..+...++++.+.+.|++.+. .+. +.+++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~-~~~-~~~~~~~  356 (467)
T 2oqx_A          281 DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRIAQVQYLVDGLEEIGV-VCQ-QAGGHAA  356 (467)
T ss_dssp             GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTTC-CEE-EECSSCE
T ss_pred             hhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh--HHHHHHHHHHHHHHHHHHHHCCC-eee-cCCceEE
Confidence            1 113444443322   10 0 112233333333333322111  12333445667777888876643 555 6667888


Q ss_pred             EeeCCC--CCCC-----hHHHHHHHHHhcCeEEecCCCC--C-----------CCCeEEEEecC--CCHHHHHHHHHHHH
Q 015890          321 WARLPE--KHLD-----DFEVVRWLAHRHGVVVIPGGAC--G-----------CRGHLRISFGG--LVEDDCKAAADRLR  378 (398)
Q Consensus       321 ~~~~~~--~~~~-----~~~~~~~ll~~~gi~v~~g~~~--~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~  378 (398)
                      |+.++.  ...+     ...++.+|+.++||.+.|++.|  +           ..++||++++.  .+++++++++++|.
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~  436 (467)
T 2oqx_A          357 FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFK  436 (467)
T ss_dssp             EEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHH
T ss_pred             EEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHH
Confidence            888742  1112     3345777756899999985532  1           13799999984  48899999999999


Q ss_pred             HHHHHHh
Q 015890          379 RGLEELV  385 (398)
Q Consensus       379 ~~~~~~~  385 (398)
                      +++++..
T Consensus       437 ~~l~~~~  443 (467)
T 2oqx_A          437 HVKENAA  443 (467)
T ss_dssp             HHHHSGG
T ss_pred             HHHhhhh
Confidence            9998754

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=1.2e-27  Score=224.60  Aligned_cols=286  Identities=20%  Similarity=0.222  Sum_probs=198.0

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEec
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG  141 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~  141 (398)
                      +.++..++++.+++++    +.+ +.|++++| ++|+..++. ++++||+|+++.|+|++....    ++..|.+++.+ 
T Consensus        65 ~~p~~~~l~~~la~~~----g~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-  136 (403)
T 3cog_A           65 GNPTRNCLEKAVAALD----GAK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV-  136 (403)
T ss_dssp             -CHHHHHHHHHHHHHH----TCS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE-
T ss_pred             CCchHHHHHHHHHHHh----CCC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE-
Confidence            4455678888888887    433 45665555 699999999 889999999999999875443    35689999988 


Q ss_pred             cCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEeece-eccCCCccccccC
Q 015890          142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTY-FMYDGRKHCCVEG  219 (398)
Q Consensus       142 ~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-~~livDe~~-~~~~~~~~~~~~~  219 (398)
                      +.+      |++.+++.+++++  ++|++++|+||||.+++   +++|+++|+++| +++|+|++| ......+.   ..
T Consensus       137 ~~~------d~~~l~~~i~~~t--~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~~~---~~  202 (403)
T 3cog_A          137 DCS------KIKLLEAAITPET--KLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQRPL---AL  202 (403)
T ss_dssp             CTT------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCCTT---TT
T ss_pred             CCC------CHHHHHHhcCcCC--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCCcc---cc
Confidence            553      7899999998754  99999999999999999   999999999999 999999999 33222221   13


Q ss_pred             CcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          220 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       220 ~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      +.++++.|+||.++.+| .++||+++++  +++++.+......+..+.+++.++++...++.    +..+.+...++...
T Consensus       203 ~~div~~S~sK~~~g~~~~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~n~~~  276 (403)
T 3cog_A          203 GADISMYSATKYMNGHSDVVMGLVSVNC--ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT----LHVRMEKHFKNGMA  276 (403)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEECC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred             CCeEEEEcChhhccCCCCCeEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHH
Confidence            56789999999998655 5799999864  68888887766555666788888888777765    23333344444444


Q ss_pred             HHHHhcc--------------CCCCccccCC---ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEec---CC--------
Q 015890          299 IREALSP--------------LGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GG--------  350 (398)
Q Consensus       299 l~~~l~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~--------  350 (398)
                      +.+.+++              ++...+..++   .+.++.+.++.   .. +...+++++.||.++.   |.        
T Consensus       277 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~-~~~~~~l~~~~i~~~~~s~G~~~sl~~~p  352 (403)
T 3cog_A          277 VAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TL-QHAEIFLKNLKLFTLAESLGGFESLAELP  352 (403)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CH-HHHHHHHHHCSSSEECSCCSSSSCEEECT
T ss_pred             HHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CH-HHHHHHHHhCCcceEccCCCCcceeeecc
Confidence            4444433              2332332221   13444446653   12 3344556788886543   21        


Q ss_pred             --CC------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          351 --AC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       351 --~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                        ..            + .++.||+|++.   ++.+++++.|.++++++.+
T Consensus       353 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al~~~~~  400 (403)
T 3cog_A          353 AIMTHASVLKNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQALKAAHP  400 (403)
T ss_dssp             TTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHCC
T ss_pred             cccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHHHhhc
Confidence              11            1 15789999997   4455667777777766544

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.96  E-value=1.8e-27  Score=229.92  Aligned_cols=331  Identities=13%  Similarity=0.116  Sum_probs=232.0

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHh----c-------
Q 015890           43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL----C-------  110 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l----~-------  110 (398)
                      ..++.+++++.....+.....|...+...++++.+.+++.+++|.++ +.+++++|+|+|+..++.++    +       
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~  190 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHS  190 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence            45788888887766565455666666778899999999999988865 78999999999999998874    2       


Q ss_pred             --cC------CC-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCC
Q 015890          111 --DA------GD-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG  174 (398)
Q Consensus       111 --~~------gd-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~  174 (398)
                        .+      |+ .|+++.++|+++...++..|.   +++.+ |.++ ++.+|+++|++.+++.    +.+.+|++++++
T Consensus       191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~  268 (497)
T 2qma_A          191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTV-DANA-DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGT  268 (497)
T ss_dssp             HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred             hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEE-ecCC-CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence              12      45 799999999999998888876   78888 7764 4678999999999743    323488888999


Q ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       175 nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      ||||.+.+   +++|+++|+++|+++|+|++|  +..... ...... ...++++.|+||+++.| +++|++++++  +.
T Consensus       269 ~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~--~~  342 (497)
T 2qma_A          269 TDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVND--KS  342 (497)
T ss_dssp             TTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESC--GG
T ss_pred             CCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeC--HH
Confidence            99999988   999999999999999999999  322221 100110 12347788999998744 6899999875  33


Q ss_pred             HHHHHHHhhccCCCC----c-------------chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          251 FATQLLKVQDNIPIC----A-------------SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       251 ~~~~l~~~~~~~~~~----~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      .++.+..........    .             ....++++...+  +.+.+++..++..++++++.+.|++.+.+.+..
T Consensus       343 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  420 (497)
T 2qma_A          343 NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELLA  420 (497)
T ss_dssp             GGGGGCC--------------------CCSCCCTHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS
T ss_pred             HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc
Confidence            222221100000000    0             112223333333  346678888889999999999999876656643


Q ss_pred             CCccEEEEeeCCCCCCC----hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEe-cC-CCHHHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +....++++.+.....+    ..++...+. +.|+.+.++..+...+++|+++ +. .++++++++++.|.++++++
T Consensus       421 ~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          421 EPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             CCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            33355666676532212    234555554 7799887655455567899998 44 78999999999999887763

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.96  E-value=1.6e-27  Score=223.11  Aligned_cols=281  Identities=19%  Similarity=0.117  Sum_probs=191.9

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~  143 (398)
                      +...++++.+++++    +.+  +.++++|+++|++.++. ++++||+|+++.|+|++...    .++..|.+++.+ +.
T Consensus        55 ~~~~~lr~~la~~~----g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~  126 (393)
T 1n8p_A           55 PNRENLERAVAALE----NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-ND  126 (393)
T ss_dssp             HHHHHHHHHHHHHT----TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-SS
T ss_pred             hhHHHHHHHHHHHh----CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEe-CC
Confidence            34567777777776    443  45666666899999999 88999999999999986444    346678888888 55


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEeece--eccCCCccccc
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVVDNTY--FMYDGRKHCCV  217 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~----~~~livDe~~--~~~~~~~~~~~  217 (398)
                      +      | +++++.++++  +++|++++|+||||.++|   +++|.++|+++    |+++|+|++|  +.+. . .  .
T Consensus       127 ~------d-~~l~~~i~~~--t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~-~--~  190 (393)
T 1n8p_A          127 L------L-NDLPQLIKEN--TKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-N-P--L  190 (393)
T ss_dssp             H------H-HHHHHHSCSS--EEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-C-G--G
T ss_pred             C------h-HHHHHhcccC--ceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-C-H--H
Confidence            3      6 8899999865  499999999999999999   99999999999    9999999999  3332 1 1  1


Q ss_pred             cCCcEEEEcccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 015890          218 EGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR  296 (398)
Q Consensus       218 ~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  296 (398)
                      ..+.++++.|+||.+|.+|+|+ ||+++++  +++++.+.........+.++...+++...++.    +....+...+++
T Consensus       191 ~~~~di~~~S~sK~~g~~G~rigG~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~  264 (393)
T 1n8p_A          191 NFGADIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSA  264 (393)
T ss_dssp             GGTCSEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHH
T ss_pred             HcCCeEEEEECcccccCCCCceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHH
Confidence            2246689999999999899999 9998853  67888777665433445566666666666654    445556666777


Q ss_pred             HHHHHHhccCCC-Cc-cccC---------------C--c-cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC----
Q 015890          297 EIIREALSPLGE-GA-VKGG---------------E--G-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----  352 (398)
Q Consensus       297 ~~l~~~l~~~~~-~~-~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----  352 (398)
                      ..+.+.|++.+. +. +..|               .  . +..+++.++....+...++..+ +..++.+..|+.|    
T Consensus       265 ~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l-~~~~~~~s~G~~~s~~~  343 (393)
T 1n8p_A          265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASST-RLFTLAESLGGIESLLE  343 (393)
T ss_dssp             HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCCSSCEEE
T ss_pred             HHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhC-CcceECCCCCCCcceee
Confidence            777777776543 11 1111               1  2 5567778863211223333332 2334444444321    


Q ss_pred             ------C-------------CCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          353 ------G-------------CRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       353 ------~-------------~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                            +             .++.||+|++. .++++++.+.++|.+
T Consensus       344 ~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~  390 (393)
T 1n8p_A          344 VPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ  390 (393)
T ss_dssp             CTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             ccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence                  1             14689999998 444455555555443

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.96  E-value=1.6e-27  Score=227.58  Aligned_cols=347  Identities=11%  Similarity=0.031  Sum_probs=230.2

Q ss_pred             HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhc----CCCC-----CCCCCC----CCcHHHHHHHHHHHhhh
Q 015890           18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW----DPSI-----SKYGAD----EGLPELRDALVKKLNQE   84 (398)
Q Consensus        18 ~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~----~~~~-----~~y~~~----~~~~~~~~~l~~~l~~~   84 (398)
                      .+.+.++.+..-...+.|+.+... +.|+.|++++.....    +...     ..+.+.    ++..++.+.+.+++.++
T Consensus        67 ~i~~~~~~~~~~~~~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~  145 (456)
T 2z67_A           67 KIKLFLKFLSMMDTDKDPKSVRIG-EREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQ  145 (456)
T ss_dssp             HHHHHHHHHHTTBGGGCTTCEECS-SCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccccccccc-cccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHH
Confidence            344444444433444556555433 446777777665321    1000     001010    12456778888888888


Q ss_pred             cCCCCCcEEEecChH-HHHHHHHHHhcc--CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhh
Q 015890           85 NKLYKSSVMVTAGAN-QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL  159 (398)
Q Consensus        85 ~~~~~~~v~~~~g~t-~a~~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l  159 (398)
                      +|.+++ +++++|+| .++..++.++..  +|+.|+++.++|..+...++..|++++.+ +..  ++++.+|+++|++++
T Consensus       146 ~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~d~~~l~~~i  223 (456)
T 2z67_A          146 LGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLDGDRVYVPVEDIENAI  223 (456)
T ss_dssp             TTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEETTEEECCHHHHHHHH
T ss_pred             cCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEE-EEeccCCCCCcCHHHHHHHH
Confidence            898766 99999999 566656666543  67789999999999999999999999888 652  244678999999999


Q ss_pred             -cc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEccccccc
Q 015890          160 -ET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       160 -~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~  232 (398)
                       ++  ++.+.+|++++|+||||.+.|   +++|.++|+++|+++++|++|  +.....+..  ......++++.|++|++
T Consensus       224 ~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~  300 (456)
T 2z67_A          224 KKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNL  300 (456)
T ss_dssp             HHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHH
T ss_pred             HHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCc
Confidence             53  233578888999999999999   999999999999999999998  222101110  11112346788999987


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC---CC
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EG  309 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~  309 (398)
                      + ++.++|++++++  +++++.+...........+...+.++...+.  ...+++..++..++++++.+.|++.+   +.
T Consensus       301 ~-~p~g~G~l~~~~--~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~  375 (456)
T 2z67_A          301 L-TPIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKKLLDELLNDLSKKTGG  375 (456)
T ss_dssp             C-CCSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             C-CCCCeEEEEEcC--HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence            5 568899999954  6777777443322211222334444444442  45678888889999999999998773   34


Q ss_pred             ccccCCccEEEEeeC--CCCCCChHHHHHHHHHhcCe---EEe------cCCCC--CCCCeEEEEecC-CCHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARL--PEKHLDDFEVVRWLAHRHGV---VVI------PGGAC--GCRGHLRISFGG-LVEDDCKAAAD  375 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi---~v~------~g~~~--~~~~~iRi~~~~-~~~~~~~~~~~  375 (398)
                      .+..++  +++++.+  +.   ...++..+|. ++||   .+.      +|..|  ...+++|++++. .++++++++++
T Consensus       376 ~v~~~~--~~v~~~~~~~~---~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~  449 (456)
T 2z67_A          376 KFLDVE--SPIASCISVNS---DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVS  449 (456)
T ss_dssp             CBCCCC--CSSEEEEECSS---CHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHH
T ss_pred             EecCCC--CeEEEEEeccc---HHHHHHHHHH-HcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHH
Confidence            666665  4455555  32   1467777775 6675   443      12222  235799999986 79999999999


Q ss_pred             HHHHHH
Q 015890          376 RLRRGL  381 (398)
Q Consensus       376 ~l~~~~  381 (398)
                      +|++++
T Consensus       450 ~L~~~~  455 (456)
T 2z67_A          450 KLEKIL  455 (456)
T ss_dssp             HHHTC-
T ss_pred             HHHHHh
Confidence            998654

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.96  E-value=1.4e-27  Score=230.09  Aligned_cols=334  Identities=12%  Similarity=0.037  Sum_probs=231.9

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---------CcEEEecChHHHHHHHHHHhccC---
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDA---  112 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---------~~v~~~~g~t~a~~~~~~~l~~~---  112 (398)
                      +..+.+++...+.. ....|...++..++++.+.+++.+++|.+.         ..+++|+|+|+|+..++.++...   
T Consensus        87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~  165 (486)
T 1js3_A           87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (486)
T ss_dssp             HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence            34466667666643 356676677788999999999999988864         35899999999999998876421   


Q ss_pred             ------CC--------E--EEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC----CCeEEEEeC
Q 015890          113 ------GD--------S--VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVN  172 (398)
Q Consensus       113 ------gd--------~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----~~~~v~i~~  172 (398)
                            ||        +  |+++.++|+++...++..|++++.+ +.++ ++.+|+++|++++++++    .+.+|++++
T Consensus       166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v-~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~  243 (486)
T 1js3_A          166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDG-KFAMRASALQEALERDKAAGLIPFFVVATL  243 (486)
T ss_dssp             HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEe-ecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence                  42        4  7889999999999999999999999 8764 56899999999997543    124888999


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCC--Cccccc-cCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDG--RKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~--~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      |+||||.+.+   +++|+++|+++|+++++|++|  +.+..  ...... ..+.+.++.|.||+++.| +++|++++++ 
T Consensus       244 ~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p-~~~G~l~~~~-  318 (486)
T 1js3_A          244 GTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKR-  318 (486)
T ss_dssp             SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESC-
T ss_pred             CCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC-cceEEEEEeC-
Confidence            9999999988   999999999999999999999  22211  111100 012235567899999754 8899999986 


Q ss_pred             cHHH-HHHHH---Hhhcc-----------------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          248 VEGF-ATQLL---KVQDN-----------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       248 ~~~~-~~~l~---~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                       +.. .+.+.   .....                 .+.......++++...+  +.+.+++..++..++++++.+.|++.
T Consensus       319 -~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~  395 (486)
T 1js3_A          319 -RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY--GVKGLQAYIRKHVQLSHEFEAFVLQD  395 (486)
T ss_dssp             -HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             443 22221   00000                 00012234444444444  24667888888999999999999888


Q ss_pred             CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++++..++...++.+.++.......++.++|. +.|+.+.++..+...+++|++++.  .+++++++++++|+++++++
T Consensus       396 ~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~  474 (486)
T 1js3_A          396 PRFEVCAEVTLGLVCFRLKGSDGLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL  474 (486)
T ss_dssp             TTEEECSCCCSSEEEEEESSCHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEeCCCceeEEEEEecChHHHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            665665433244555565421111466777776 567654443334456799999754  57889999999999999888


Q ss_pred             hccccc
Q 015890          385 VKDGMV  390 (398)
Q Consensus       385 ~~~~~~  390 (398)
                      .++.++
T Consensus       475 ~~~~~~  480 (486)
T 1js3_A          475 LAAEEG  480 (486)
T ss_dssp             HC----
T ss_pred             Hhhhcc
Confidence            765443

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.96  E-value=2e-26  Score=216.20  Aligned_cols=309  Identities=13%  Similarity=0.108  Sum_probs=217.1

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFA  120 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~--~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~  120 (398)
                      .++++++++.+.+..    .|.+..|  ..++++.+++++    +.  +++++++|++++++.++.++ .++||+|+++.
T Consensus        10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~   79 (394)
T 1o69_A           10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS----KS--ENALALNSATAALHLALRVAGVKQDDIVLASS   79 (394)
T ss_dssp             --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence            357888888887754    2545455  788999999988    33  68999999999999999999 89999999999


Q ss_pred             CCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015890          121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW  199 (398)
Q Consensus       121 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~  199 (398)
                      |+|+++...++..|.+++.+ +.+ +++.+|++.+++.+++.. .+++|++++   |+|...+   +++|.++|+++|++
T Consensus        80 ~~~~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~  151 (394)
T 1o69_A           80 FTFIASVAPICYLKAKPVFI-DCD-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIV  151 (394)
T ss_dssp             SSCGGGTHHHHHTTCEEEEE-CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCE
T ss_pred             CccHHHHHHHHHcCCEEEEE-EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCE
Confidence            99999999999999999999 777 456789999999998521 258998885   8998877   99999999999999


Q ss_pred             EEEeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCC-----------
Q 015890          200 LVVDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-----------  265 (398)
Q Consensus       200 livDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~-----------  265 (398)
                      +|+|++| ++  +.+...... .+.++...|.+|.++  |.++||+++++  +++++.+..........           
T Consensus       152 li~Dea~~~g~~~~~~~~~~~-~~~~~~s~s~~K~l~--~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~g~  226 (394)
T 1o69_A          152 LIEDAAEALGSFYKNKALGTF-GEFGVYSYNGNKIIT--TSGGGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGY  226 (394)
T ss_dssp             EEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSC--CSSCEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCC
T ss_pred             EEEECcCcccceeCCcccccc-cCcEEEEEeCCccCC--CCCceEEEECC--HHHHHHHHHHHHhccccCccccccccCc
Confidence            9999999 33  333221111 233444455577664  66899999964  67888776654321100           


Q ss_pred             ---cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC---ccE--EEEeeCCCC----------
Q 015890          266 ---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAI--YLWARLPEK----------  327 (398)
Q Consensus       266 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~--~~~~~~~~~----------  327 (398)
                         .+....+++...++    ++++..++.+++++++.+.|++.  +.+..+.   .++  .+++.++..          
T Consensus       227 ~~~~~~~~aa~~l~~l~----~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  300 (394)
T 1o69_A          227 NYRLSNVLGAIGVAQME----VLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKD  300 (394)
T ss_dssp             BCBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred             ccCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence               22233333222333    35667788888899999999876  3444332   122  355666532          


Q ss_pred             ----------CCChHHHHHHHHHhcCeEEecCCCCC------CC--------------CeEEEEecC-CCHHHHHHHHHH
Q 015890          328 ----------HLDDFEVVRWLAHRHGVVVIPGGACG------CR--------------GHLRISFGG-LVEDDCKAAADR  376 (398)
Q Consensus       328 ----------~~~~~~~~~~ll~~~gi~v~~g~~~~------~~--------------~~iRi~~~~-~~~~~~~~~~~~  376 (398)
                                ..+..++.+.| .++||.++++..+.      ..              ..+|+..+. .+++|+++++++
T Consensus       301 ~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~  379 (394)
T 1o69_A          301 INISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKL  379 (394)
T ss_dssp             EECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred             ccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHH
Confidence                      11355677766 47899999985430      00              234555455 789999999999


Q ss_pred             HHHHHH
Q 015890          377 LRRGLE  382 (398)
Q Consensus       377 l~~~~~  382 (398)
                      |++++.
T Consensus       380 l~~~~~  385 (394)
T 1o69_A          380 ILKSIK  385 (394)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            887654

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.96  E-value=2e-26  Score=222.98  Aligned_cols=329  Identities=12%  Similarity=0.101  Sum_probs=228.5

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc--------CC-
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD--------AG-  113 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~--------~g-  113 (398)
                      ++.++..+.....+.....|...+...++++.+.+++.+.+|.+  ..++++++|+|+|+..++.++..        +| 
T Consensus       105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~  184 (504)
T 2okj_A          105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM  184 (504)
T ss_dssp             HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred             HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence            34443333333334334567666677788999999999988987  77899999999999999998753        46 


Q ss_pred             ----C-EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCC
Q 015890          114 ----D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       114 ----d-~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~  181 (398)
                          + .|+++.++|+++...++..|.   +++.+ |.++ ++.+|++.|++++++    +..+++|++++|+||||.+.
T Consensus       185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~  262 (504)
T 2okj_A          185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD  262 (504)
T ss_dssp             GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred             cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE-ecCC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence                6 789999999999998888876   88888 7764 468899999999975    21258999999999999998


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--eccCCCc--cccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMYDGRK--HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~--~~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      +   +++|+++|+++|+++++|++|  +......  .... ....++++.|.||+++.| .++|++++++  +++++...
T Consensus       263 ~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~--~~~~~~~~  336 (504)
T 2okj_A          263 P---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGCN  336 (504)
T ss_dssp             C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHHH
T ss_pred             C---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEEC--HHHHHHHh
Confidence            8   999999999999999999999  3221111  1111 012347788999999744 6899999885  34544322


Q ss_pred             Hhh-ccC-CC-------------------CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--
Q 015890          257 KVQ-DNI-PI-------------------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--  313 (398)
Q Consensus       257 ~~~-~~~-~~-------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--  313 (398)
                      ... ... ..                   ......++++..++.  .+.+++..++..++++++.+.|++.+.+++..  
T Consensus       337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  414 (504)
T 2okj_A          337 QMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--TVGFENQINKCLELAEYLYAKIKNREEFEMVFNG  414 (504)
T ss_dssp             CCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS
T ss_pred             cCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            111 100 00                   113455566655554  45678888889999999999999886656654  


Q ss_pred             -CCccEEEEeeCCCCCC--------------ChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEec-C-CCHHHHHHHHH
Q 015890          314 -GEGAIYLWARLPEKHL--------------DDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFG-G-LVEDDCKAAAD  375 (398)
Q Consensus       314 -~~~~~~~~~~~~~~~~--------------~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~-~~~~~~~~~~~  375 (398)
                       +..+++.+...+....              ...++.+.|. +.|+.+..+..+.. .+++|++++ . .++++++++++
T Consensus       415 ~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~  493 (504)
T 2okj_A          415 EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIE  493 (504)
T ss_dssp             CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred             CCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHH
Confidence             5545555443332100              0345667776 66754333222322 368999997 4 68999999999


Q ss_pred             HHHHHHHHH
Q 015890          376 RLRRGLEEL  384 (398)
Q Consensus       376 ~l~~~~~~~  384 (398)
                      +|+++++++
T Consensus       494 ~l~~~~~~~  502 (504)
T 2okj_A          494 EIERLGQDL  502 (504)
T ss_dssp             HHHHHHTC-
T ss_pred             HHHHHHHHH
Confidence            998877654

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.95  E-value=1.3e-27  Score=228.83  Aligned_cols=337  Identities=12%  Similarity=0.076  Sum_probs=225.4

Q ss_pred             HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      .+|+.|+||..|...  ++ .+|++.+|+.+++...   ....|+. ....++++.+++.+.+..+...+.|++++|+++
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse  138 (472)
T 1ohv_A           60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSC  138 (472)
T ss_dssp             TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence            467889999887643  34 5899999999876321   1122322 345789999999887766656789999999999


Q ss_pred             HHHHHHHHhc--------c-----------------CC---CEEEEeCCCCcChhhHHH-hcCcEE-----------EEe
Q 015890          101 AFVNIVLTLC--------D-----------------AG---DSVVMFAPYYFNSYMSFQ-MTGVTH-----------ILV  140 (398)
Q Consensus       101 a~~~~~~~l~--------~-----------------~g---d~Vl~~~p~~~~~~~~~~-~~g~~~-----------~~~  140 (398)
                      |++.+++.+.        .                 +|   ++|++.+++|+++...+. ..|...           ..+
T Consensus       139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~  218 (472)
T 1ohv_A          139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  218 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred             HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence            9999998874        1                 35   899999999998765442 223110           111


Q ss_pred             ccCCCCCC-------------CCChHHHHHhhccC----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEE
Q 015890          141 GPCSSKTL-------------HPDADWLEKTLETK----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       141 ~~~~~~~~-------------~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                       +.+...+             ..|++.|++.+++.    .++++|++++.+|++|. ..+++++++|.++|++||+++|+
T Consensus       219 -~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~  297 (472)
T 1ohv_A          219 -PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV  297 (472)
T ss_dssp             -CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             -CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence             2111100             12688899988751    12588888877888997 46899999999999999999999


Q ss_pred             eece--eccCCCccccccCCcE--EEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHh
Q 015890          203 DNTY--FMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL  278 (398)
Q Consensus       203 De~~--~~~~~~~~~~~~~~~~--i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  278 (398)
                      ||+|  +++.|........+..  +.+.|+||.+ ++|   |+++ +   +++. .+.......+++.++++++++.++|
T Consensus       298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~-l~G---G~~~-~---~~~~-~~~~~~~~~T~~~~~~~~aaa~aal  368 (472)
T 1ohv_A          298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKM-MTG---GFFH-K---EEFR-PNAPYRIFNTWLGDPSKNLLLAEVI  368 (472)
T ss_dssp             ECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGG-SSE---EEEE-C---GGGS-CSSSSSSCCSSSSCHHHHHHHHHHH
T ss_pred             eCcccCCCCCCCchhccccCCCCCCCEEEEcccc-ccC---CccC-c---hhhc-ccccccccCccCccHHHHHHHHHHH
Confidence            9999  5665532222211111  2344889994 335   7766 5   4442 1222333445677889999888888


Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHHhccC----CC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC
Q 015890          279 QTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG  353 (398)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~  353 (398)
                      +...+  ++..++++++++++.+.|+++    +. +....+. +.+++++++.. .+..+++.+|+ ++||.+.++    
T Consensus       369 ~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~~~~~----  439 (472)
T 1ohv_A          369 NIIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE-SIRNKLISIAR-NKGVMLGGC----  439 (472)
T ss_dssp             HHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEE----
T ss_pred             HHHHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh-hHHHHHHHHHH-HCCeEEecC----
Confidence            74111  234455566666666655543    32 2324455 56666777531 13457788776 789999985    


Q ss_pred             CCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          354 CRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       354 ~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      ..++||++++. .+++++++++++|.+++++
T Consensus       440 g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          440 GDKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            25799998887 7999999999999998865

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.95  E-value=4.3e-26  Score=220.26  Aligned_cols=327  Identities=12%  Similarity=0.098  Sum_probs=227.0

Q ss_pred             cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC--CCcEEEecChHHHHHHHHHHhcc----------
Q 015890           45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD----------  111 (398)
Q Consensus        45 ~~~v~-~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~--~~~v~~~~g~t~a~~~~~~~l~~----------  111 (398)
                      ++.++ +.+...+.. ....|...++..++++.+.+|+.+++|.+  +..+++++|+|+|+..++.++..          
T Consensus       108 ~~~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G  186 (511)
T 3vp6_A          108 IIGLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG  186 (511)
T ss_dssp             HHHHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred             HHHHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence            44444 455555543 46778788888999999999999999887  46899999999999999888764          


Q ss_pred             ----CCCEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeCCCCCCccC
Q 015890          112 ----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       112 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~p~nptG~~  180 (398)
                          +++.|+++.++|.++...++..|.   +++.+ +.+.+ +.+|+++|++++++.    ..+++|++++++|++|.+
T Consensus       187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v-~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v  264 (511)
T 3vp6_A          187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF  264 (511)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred             cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEe-ecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence                467899999999999999999998   88888 87754 689999999999743    125899999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccC-CCcc--ccc-cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYD-GRKH--CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~-~~~~--~~~-~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      .+   +++|+++|++||+++++|++| ...- ....  ... ....+.++.+.+|+++.| ..+|++++++  +.+....
T Consensus       265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~--~~~~~~~  338 (511)
T 3vp6_A          265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGC  338 (511)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHH
T ss_pred             cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeC--HHHHHHH
Confidence            88   999999999999999999999 2221 1111  110 012246778999999744 6788888875  4454443


Q ss_pred             HHhhccC-------------------CCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-
Q 015890          256 LKVQDNI-------------------PIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-  313 (398)
Q Consensus       256 ~~~~~~~-------------------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-  313 (398)
                      .......                   ..+  ......+++...+  +.++++++.++..++++++.+.|++.+++++.. 
T Consensus       339 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~  416 (511)
T 3vp6_A          339 NQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFN  416 (511)
T ss_dssp             HCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS
T ss_pred             hccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence            2111000                   000  1233344444433  356788999999999999999999886666655 


Q ss_pred             --CCccEEEEeeC-CCCCC----C----------hHHHHHHHHHhcCeEEecCCC-CCCCCeEEEEec-C-CCHHHHHHH
Q 015890          314 --GEGAIYLWARL-PEKHL----D----------DFEVVRWLAHRHGVVVIPGGA-CGCRGHLRISFG-G-LVEDDCKAA  373 (398)
Q Consensus       314 --~~~~~~~~~~~-~~~~~----~----------~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~-~-~~~~~~~~~  373 (398)
                        +..+. +++.+ +....    +          ..++.++|. ++|+.+..... .+..+++|++++ . .+.++++.+
T Consensus       417 ~~p~~~~-v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~l  494 (511)
T 3vp6_A          417 GEPEHTN-VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFL  494 (511)
T ss_dssp             SCCSSSC-EEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHH
T ss_pred             CCCCeEE-EEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHH
Confidence              44333 44433 22110    0          235667775 56765443111 112357999984 3 688999999


Q ss_pred             HHHHHHHHHHH
Q 015890          374 ADRLRRGLEEL  384 (398)
Q Consensus       374 ~~~l~~~~~~~  384 (398)
                      ++.|++.-+.+
T Consensus       495 l~~i~~~~~~~  505 (511)
T 3vp6_A          495 IEEIERLGQDL  505 (511)
T ss_dssp             HHHHHHHHC--
T ss_pred             HHHHHHHHHhh
Confidence            99888776554

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.7e-26  Score=221.71  Aligned_cols=329  Identities=13%  Similarity=0.089  Sum_probs=234.1

Q ss_pred             cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC----------cEEEecChHHHHHHHHHHhcc--
Q 015890           45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS----------SVMVTAGANQAFVNIVLTLCD--  111 (398)
Q Consensus        45 ~~~v~-~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~----------~v~~~~g~t~a~~~~~~~l~~--  111 (398)
                      +|.++ +.+...+.. ....|..+++..++++.+.+++.+.+|.+..          ..++++|+|+++..++.+.+.  
T Consensus        91 ~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~  169 (481)
T 4e1o_A           91 WPSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNK  169 (481)
T ss_dssp             HHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHH
Confidence            34444 445555443 4677888889999999999999999887642          578999999999988887642  


Q ss_pred             -----------------CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEE
Q 015890          112 -----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSV  170 (398)
Q Consensus       112 -----------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i  170 (398)
                                       +++.|+++.++|.++...++..|.+++.+ +.++ ++.+|+++|++++++.    ..+.+|++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v-~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~  247 (481)
T 4e1o_A          170 ILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFL-PVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCA  247 (481)
T ss_dssp             HHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEE-EcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence                             46789999999999999999999999999 8764 4689999999999743    11477888


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCcccc-ccC--CcEEEEcccccccCCCcceeEEEEcc
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCC-VEG--DHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~-~~~--~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      +.++|++|.+.|   +++|+++|++||+++++|++| .. ........ ..+  ..+.++.+.||+++.| ..+|+++.+
T Consensus       248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~  323 (481)
T 4e1o_A          248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVK  323 (481)
T ss_dssp             EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred             ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEe
Confidence            899999999988   999999999999999999999 22 21111111 111  1246678999999744 557887777


Q ss_pred             CCcHHHHHHHHHhhc-c----------------CCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          246 SEVEGFATQLLKVQD-N----------------IPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~-~----------------~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      +  +........... .                ...+  .....++++...+  +.+.++++.++..++++++.+.|++.
T Consensus       324 ~--~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~  399 (481)
T 4e1o_A          324 D--KYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF--GVKNLQAHVRHGTEMAKYFESLVRND  399 (481)
T ss_dssp             B--HHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             C--HHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5  444322110000 0                0001  1234444444444  24667888899999999999999998


Q ss_pred             CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC-eEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG-VVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-i~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++++..+...+++++.++.......++.++|. +.| +++.++. ..+..++|++++.  .+++++++++++|++++++
T Consensus       400 ~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~  477 (481)
T 4e1o_A          400 PSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIA-KAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL  477 (481)
T ss_dssp             TTEECCSCCCSSEEEEEESSCHHHHHHHHHHHH-HHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCceeEEEEEeCCchHHHHHHHHHHH-hCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            776776655577778887542223567788776 456 5554432 2345689999776  4789999999999999887


Q ss_pred             Hhc
Q 015890          384 LVK  386 (398)
Q Consensus       384 ~~~  386 (398)
                      +.+
T Consensus       478 l~~  480 (481)
T 4e1o_A          478 ILS  480 (481)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            653

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.92  E-value=4.1e-30  Score=243.34  Aligned_cols=330  Identities=13%  Similarity=0.062  Sum_probs=224.4

Q ss_pred             HcCCCeEEcCCccCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|..+  ++ .+|++.+++.+++.+.....| +.....++.+.+++++    + ..+.+++++|+++|+.
T Consensus        97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~----p-~~~~v~~~nSGseA~~  170 (465)
T 2yky_A           97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRF----P-SIDLVRFTNSGTEANL  170 (465)
Confidence            578999999988753  33 489999999998876433334 4444455555555554    3 3578999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHH----hcCc--EEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCC
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ----MTGV--THILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPG  174 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~  174 (398)
                      .+++.+.  ..+++|++.+++|+++...+.    ..|+  .++.+ +     + .|++.|++.++.. ..+++|+++..+
T Consensus       171 ~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~-~-----~-~d~~~l~~~l~~~~~~~aavi~epv~  243 (465)
T 2yky_A          171 MALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG-V-----Y-NDVEGTADLLKRHGHDCAAILVEPML  243 (465)
Confidence            9998864  345899999999988665433    1233  22222 1     1 2788999998731 235888887656


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHcCCEEEEeeceecc-CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHH
Q 015890          175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA  252 (398)
Q Consensus       175 nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~  252 (398)
                      +++|.+ .+++++++|.++|+++|+++|+||+|. + .+........+....+.|+||.+| +|+|+||++++   ++++
T Consensus       244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~---~~i~  318 (465)
T 2yky_A          244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIG-GGMSFGAFGGR---RDLM  318 (465)
Confidence            679965 568889999999999999999999994 2 122111111223344668999998 59999999999   6788


Q ss_pred             HHHHH-----hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCccccCCccEEEEee
Q 015890          253 TQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYLWAR  323 (398)
Q Consensus       253 ~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~  323 (398)
                      +.+..     .....+++.|+++++++.++|+...+  +...+++.++.+++++.|++    .+......+. +.++++.
T Consensus       319 ~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~-G~~~~i~  395 (465)
T 2yky_A          319 ERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTGL-GSLGTIH  395 (465)
Confidence            87765     23445778899999999888875221  23344455555555555543    3332223343 7778877


Q ss_pred             CCC-CC-----------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          324 LPE-KH-----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       324 ~~~-~~-----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      +.. ..           .....++..++ ++||++.|+.. .   .  +++. .+++++++++++|.++++++.
T Consensus       396 ~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~---~--~s~~-~t~edid~~l~~l~~~l~~~~  461 (465)
T 2yky_A          396 FSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y---A--LSLE-IADAGRDAFAEALADFIGEQR  461 (465)
Confidence            753 10           01345777776 79999998752 1   1  5655 589999999999999987753

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.95  E-value=2.6e-26  Score=215.55  Aligned_cols=211  Identities=16%  Similarity=0.061  Sum_probs=156.2

Q ss_pred             CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCC
Q 015890           69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCS  144 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~  144 (398)
                      ...++++.+++++    +.  ++.++++|+++|++.++.+++++||+|+++.+.|++....+    +..|+++..+ +.+
T Consensus        83 ~~~~le~~lA~l~----g~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v-~~~  155 (415)
T 2fq6_A           83 THFSLQQAMCELE----GG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DPL  155 (415)
T ss_dssp             HHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CTT
T ss_pred             hHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEE-CCC
Confidence            3455666666655    54  35677789999999999999999999999999998876544    4578999888 542


Q ss_pred             CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEeece-eccCCCccccccCCc
Q 015890          145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~--~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                            |++++++++++++  ++|++++|+||+|.++|   +++|+++|++  +|+++|+|++| .++...+.   ..+.
T Consensus       156 ------d~~~le~ai~~~t--klV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~~p~---~~g~  221 (415)
T 2fq6_A          156 ------IGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL---DFGI  221 (415)
T ss_dssp             ------CGGGGGGGCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG---GGTC
T ss_pred             ------CHHHHHHhhccCC--cEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccCCcc---ccCC
Confidence                  7899999998765  99999999999999999   9999999999  99999999999 43322222   2345


Q ss_pred             EEEEcccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|++|.++.+|.+ +||++.+   +++++.+...........++...+++...++    .+..+.+...++...+.
T Consensus       222 Div~~S~sK~lg~~g~~~~G~l~~~---~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~----~l~~r~~~~~~n~~~l~  294 (415)
T 2fq6_A          222 DVSIQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLR----TLGVRLRQHHESSLKVA  294 (415)
T ss_dssp             SEEEEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCccccCCCCCceEEEEEeC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----HHHHHHHHHHHHHHHHH
Confidence            68899999999877754 6899888   4566666655443334444444444444443    34555666677777788


Q ss_pred             HHhccCC
Q 015890          301 EALSPLG  307 (398)
Q Consensus       301 ~~l~~~~  307 (398)
                      +.|++.+
T Consensus       295 ~~L~~~~  301 (415)
T 2fq6_A          295 EWLAEHP  301 (415)
T ss_dssp             HHHHTCT
T ss_pred             HHHHcCC
Confidence            8777654

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.95  E-value=2.2e-26  Score=216.73  Aligned_cols=284  Identities=19%  Similarity=0.148  Sum_probs=191.6

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccC
Q 015890           68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC  143 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~  143 (398)
                      +...++++.+++++    +.  +..++++++++|+..++.+++++||+|+++.|+|++...    .++..|++++.+ +.
T Consensus        82 p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v-~~  154 (430)
T 3ri6_A           82 PTVEDLEQRLKNLT----GA--LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV-DV  154 (430)
T ss_dssp             HHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE-CT
T ss_pred             HHHHHHHHHHHHHH----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CC
Confidence            34455555555554    54  335666777899999999999999999999999988776    667889999988 55


Q ss_pred             CCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcE
Q 015890          144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHV  222 (398)
Q Consensus       144 ~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~  222 (398)
                      +      |++.+++++++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .+...   .....+.+
T Consensus       155 ~------d~~~l~~ai~~~t--~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~---~~~~~g~d  220 (430)
T 3ri6_A          155 M------DSLAVEHACDETT--KLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL---EAKRLGVD  220 (430)
T ss_dssp             T------CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC---CGGGGTCS
T ss_pred             C------CHHHHHHhhCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---ChHHcCCE
Confidence            3      8999999998764  99999999999999999   889999999999999999999 33321   11222345


Q ss_pred             EEEcccccccCCCcceeE-EEEccCC--c------H---------HHHHHHHH-hhccCCCCcchHHHHHHHHHhcCCch
Q 015890          223 VNLFSFSKAYGMMGWRVG-YIAYPSE--V------E---------GFATQLLK-VQDNIPICASIISQHLALYSLQTGPE  283 (398)
Q Consensus       223 i~~~s~sK~~~~~G~r~G-~i~~~~~--~------~---------~~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~  283 (398)
                      +++.|++|.++.+|..+| +++.+..  +      +         .++..+.. .......+.++...+.+...+    +
T Consensus       221 iv~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l----~  296 (430)
T 3ri6_A          221 IEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL----E  296 (430)
T ss_dssp             EEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH----H
T ss_pred             EEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----h
Confidence            889999999986665444 4542221  1      1         11222221 112223344444444433333    3


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE
Q 015890          284 WVTERVKDLVRNREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV  346 (398)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v  346 (398)
                      .+..+.++..+++..+.+.|++.+.++ +..|.                +++.+++.++. ..+...+++.+ +-.++.+
T Consensus       297 ~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l-~~~~~~~  374 (430)
T 3ri6_A          297 TMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDAL-KLIRRAT  374 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHC-SSSEECS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhC-CcceecC
Confidence            356667777888999999999887654 33332                34488889872 22333444433 2345555


Q ss_pred             ecCCCCC-----------------------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          347 IPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       347 ~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ..|..+.                       .++.||+|++.   |+.+.+++.|++++
T Consensus       375 s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al  429 (430)
T 3ri6_A          375 NIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL  429 (430)
T ss_dssp             CCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred             CCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence            6665432                       24689999997   55666667777665

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.95  E-value=2.6e-26  Score=219.93  Aligned_cols=330  Identities=11%  Similarity=0.031  Sum_probs=231.1

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC---------cEEEecChHHHHHHHHHHhcc----
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCD----  111 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~---------~v~~~~g~t~a~~~~~~~l~~----  111 (398)
                      ++.++..+.....+.....|..+++..++++.+.+++.+.+|.+.+         ..++++|+|+++..++.+.+.    
T Consensus        86 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~  165 (475)
T 3k40_A           86 YPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLK  165 (475)
T ss_dssp             HHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHH
Confidence            4444444434334444667878888899999999999999987643         689999999999988887631    


Q ss_pred             ---------------CCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEeC
Q 015890          112 ---------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVN  172 (398)
Q Consensus       112 ---------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~~  172 (398)
                                     +++.|+++..+|.++...++..|++++.+ +.+++ + +|+++|+++|++.    ..+.+|+++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v-~~d~~-~-~d~~~L~~~i~~~~~~~~~~~~v~~~~  242 (475)
T 3k40_A          166 EVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSV-QSENH-R-MRGAALEKAIEQDVAEGLIPFYAVVTL  242 (475)
T ss_dssp             HHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEE-CCBTT-B-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             HhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEE-ECCCC-C-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence                           23579999999999999999999999999 88755 4 8999999999743    1146788889


Q ss_pred             CCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-cCCCcccc-cc--CCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-YDGRKHCC-VE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       173 p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~~~~~~~~-~~--~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      ++|++|.+.|   +++|+++|++||+++++|++| .. ........ ..  ...+.++.|.||+++ ....+|+++.++ 
T Consensus       243 ~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~-  317 (475)
T 3k40_A          243 GTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKD-  317 (475)
T ss_dssp             SCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESS-
T ss_pred             cCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeC-
Confidence            9999999988   999999999999999999999 22 21111111 11  112467789999886 335678887775 


Q ss_pred             cHHHH-HHHHH---hhcc-------------CCCC--cchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          248 VEGFA-TQLLK---VQDN-------------IPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       248 ~~~~~-~~l~~---~~~~-------------~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                       +... +.+..   +...             ...+  .....++++...+  +.+.++++.++..++++++.+.|++.++
T Consensus       318 -~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g  394 (475)
T 3k40_A          318 -PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY--GVENLQAHIRRHCNFAKQFGDLCVADSR  394 (475)
T ss_dssp             -GGGC---------------------------CCCGGGTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             -HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence             3221 11110   0000             0001  1123333333333  2456788888999999999999998877


Q ss_pred             CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHhc
Q 015890          309 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +++..+...+.+++.++.......++.++|.++.++.+.++. ..+..++|++++.  ++++++++++++|+++++++..
T Consensus       395 ~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~  473 (475)
T 3k40_A          395 FELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ  473 (475)
T ss_dssp             EEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            677765556777777753222356788888754444555433 2345789999875  4789999999999999988764

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.95  E-value=8.8e-26  Score=211.23  Aligned_cols=279  Identities=20%  Similarity=0.188  Sum_probs=194.5

Q ss_pred             HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-----HhcCcEEEEeccCCCCC
Q 015890           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKT  147 (398)
Q Consensus        73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~~~~~~~  147 (398)
                      ..+.+.+.+.++.+.  +.+++++|+++|+.. +..++++||+|+++.++|++....+     +..|.+++.+ +.+   
T Consensus        68 ~~~~l~~~la~l~g~--~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v-~~~---  140 (400)
T 3nmy_A           68 TRFAYERCVAALEGG--TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV-DLT---  140 (400)
T ss_dssp             HHHHHHHHHHHHHTC--SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE-CTT---
T ss_pred             HHHHHHHHHHHHhCC--CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE-CCC---
Confidence            344444444444454  367777778999998 5678899999999999998666554     3459999888 543   


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~  226 (398)
                         |++.+++++++++  ++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| .++...+.   ..+.++++.
T Consensus       141 ---d~~~l~~~i~~~~--~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~~---~~g~div~~  209 (400)
T 3nmy_A          141 ---DPAAFKAAIRADT--KMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRPL---SLGADLVVH  209 (400)
T ss_dssp             ---SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCGG---GGTCSEEEE
T ss_pred             ---CHHHHHHHhccCC--CEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCcEEEe
Confidence               7899999998764  99999999999999999   999999999999999999999 32222111   123558899


Q ss_pred             ccccccCCCcceeEE--EEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890          227 SFSKAYGMMGWRVGY--IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       227 s~sK~~~~~G~r~G~--i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      |++|.++.+|.++|.  ++..+  +++++.+.........+.++...+++...++.    +..+.++..+++..+.+.|+
T Consensus       210 S~sK~l~g~g~~~gG~~vv~~~--~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----l~~r~~~~~~~a~~l~~~L~  283 (400)
T 3nmy_A          210 SATKYLNGHSDMVGGIAVVGDN--AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----LPLRMRAHCENALALAQWLE  283 (400)
T ss_dssp             ETTTTTTCSSSCCCEEEEECSC--HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHT
T ss_pred             cCccccCCCCCcceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHH
Confidence            999999877766654  55544  77888887766655667777777777666664    45666777888888999998


Q ss_pred             cCCCCc-cccC----------------CccEEEEeeCCCCCCChHHHHHHHHHhc---CeEEecCCCCC-----------
Q 015890          305 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRH---GVVVIPGGACG-----------  353 (398)
Q Consensus       305 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~-----------  353 (398)
                      +.+.+. +..|                ..+.++++.++..    .+....++++.   ++.+..|..+.           
T Consensus       284 ~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~  359 (400)
T 3nmy_A          284 THPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGG----FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHA  359 (400)
T ss_dssp             TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH----HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTT
T ss_pred             cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCc----HHHHHHHHHcCCcceEecCCCCCcceeeCccccccc
Confidence            876533 2221                1256778888632    23233333333   33333333211           


Q ss_pred             ------------CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          354 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       354 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                                  .++.+|+|++.   |+.+.+++.|.+++.
T Consensus       360 ~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~  397 (400)
T 3nmy_A          360 SIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV  397 (400)
T ss_dssp             TSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred             cCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence                        24689999997   555566677777765

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.95  E-value=8.4e-26  Score=214.82  Aligned_cols=320  Identities=17%  Similarity=0.123  Sum_probs=209.1

Q ss_pred             EcCCccCCCCCcHHHHHHH--HHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           34 SLAQGVVYWQPPKMAMEKV--KELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        34 ~l~~g~~~~~~~~~v~~a~--~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .++.|.++...|+.+.+.+  ...+..  .+.|.+  ..+..++.+.+.+.+.+++|.+++++++++|+|.+++.+..++
T Consensus        68 ~~~~g~~~~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~  145 (438)
T 1wyu_A           68 FLGGGVRSHHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLAL  145 (438)
T ss_dssp             CCCSSCCCCCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHH
T ss_pred             ccCCCccCCcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHH
Confidence            4445666666666664443  222222  122321  4456677777778887777888888899999995555444442


Q ss_pred             -ccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          110 -CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       110 -~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                       .++||+|+++.++|+.+...+    +..|++++.+ +. ++ +.+|+++    ++++  +++|++++| ||||.+.+  
T Consensus       146 ~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v-~~-~~-~~~d~~~----i~~~--t~~v~i~~p-n~tG~~~~--  213 (438)
T 1wyu_A          146 RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL-PL-EG-GRTPLPE----VGEE--VGAVVVQNP-NFLGALED--  213 (438)
T ss_dssp             HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE-CC-BT-TBCCCCC----CCTT--EEEEEEESS-CTTSBCCC--
T ss_pred             hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE-cC-cC-CccCHHH----hCCC--eEEEEEECC-CCCeEEec--
Confidence             478999999999998877555    4589999998 65 23 4667766    5544  599999999 99999998  


Q ss_pred             HHHHHHHHHHHcCCEEEEeec-e-eccCCCccccccCCcEEEEcccccccC----CCcceeEEEEccCCcHHHHHHHHHh
Q 015890          185 LLKRISDLCKAAGSWLVVDNT-Y-FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV  258 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~-~-~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~i~~~~~~~~~~~~l~~~  258 (398)
                       +++|+++|+++|+++|+|.. + ++....+   ...+.+++++| +|.||    +.|.++|+++++   +++++.+...
T Consensus       214 -l~~i~~la~~~g~~vivd~d~~a~g~~~~~---~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~---~~~~~~l~~~  285 (438)
T 1wyu_A          214 -LGPFAEAAHGAGALFVAVADPLSLGVLKPP---GAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK---KAFVRQLPGR  285 (438)
T ss_dssp             -HHHHHHHHHHTTCEEEEECCTTGGGTBCCH---HHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC---GGGGGGCCSC
T ss_pred             -HHHHHHHHHHcCCEEEEEechhhccCcCCC---ccCCCCEEEEC-CcccCCCccCCCCCeeEEEEc---HHHHHhCCCc
Confidence             99999999999999996632 2 2221111   11123366666 55443    456689999998   4554433110


Q ss_pred             -------------------------h-ccCCCCc---chHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          259 -------------------------Q-DNIPICA---SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       259 -------------------------~-~~~~~~~---~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                                               + ...+.+.   +......+...+.. +.+.+++..++..++++++.+.|+++++
T Consensus       286 ~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g  365 (438)
T 1wyu_A          286 LVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG  365 (438)
T ss_dssp             CEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             eeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence                                     0 0011111   11222111212322 2345778888899999999999999855


Q ss_pred             CccccCCccEE--EEeeCCCCCCChHHHHHHHHHhcCeEE--ecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVV--IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       309 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gi~v--~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +++..+. .++  +.+.++   .+..++.++|. ++||.+  .++..|. ++++||+++. .+.+++++++++|++++
T Consensus       366 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          366 VRPFTPK-PFFNEFALALP---KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             CEECSCS-SBCSEEEEECS---SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             eEECCCC-CeEEEEEEeCC---CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            5666553 333  334443   25778888886 679999  6666553 7899999997 68999999999987653

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.94  E-value=6.1e-25  Score=212.96  Aligned_cols=329  Identities=13%  Similarity=0.106  Sum_probs=223.7

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc-------c-CCC-
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-------D-AGD-  114 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~-------~-~gd-  114 (398)
                      .|+.+...+.....+.....|...++..++++.+.+++.+++|.++.++++++|+|+|+..++.++.       + +|+ 
T Consensus       120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~  199 (515)
T 2jis_A          120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLR  199 (515)
T ss_dssp             CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred             CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCcc
Confidence            3455554433344444445676677778888999999999889888899999999999999988874       2 465 


Q ss_pred             -----EEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEeCCCCCCccCCC
Q 015890          115 -----SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIP  182 (398)
Q Consensus       115 -----~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~~p~nptG~~~~  182 (398)
                           .|+++.++|+++...++..|.   +++.+ |.++ ++.+|+++|++++++    +..+++|++++|+|+||.+.|
T Consensus       200 ~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~  277 (515)
T 2jis_A          200 TLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVV-KADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP  277 (515)
T ss_dssp             GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred             ccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEE-ecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC
Confidence                 899999999999999998888   88888 8765 457899999999974    222589999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCEEEEeece--eccCCCcc--cccc-CCcEEEEcccccccCCCcceeEEEEccCCcH-HHHHHHH
Q 015890          183 ERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH--CCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLL  256 (398)
Q Consensus       183 ~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~-~~~~~l~  256 (398)
                         +++|+++|+++|+++|+|++|  +.......  .... .+.++++.|++|+++ .+.++|++++++  + ++++...
T Consensus       278 ---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~--~~~~~~~~~  351 (515)
T 2jis_A          278 ---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQD--TSNLLKRCH  351 (515)
T ss_dssp             ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESC--CSCHHHHHH
T ss_pred             ---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccC-CCCCeeEEEEeC--hHHHHHHHh
Confidence               999999999999999999999  22222111  1111 133478889999987 345789999885  3 2444321


Q ss_pred             ----Hhh-c----------cCCC------CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC-
Q 015890          257 ----KVQ-D----------NIPI------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-  314 (398)
Q Consensus       257 ----~~~-~----------~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-  314 (398)
                          .+. .          ....      ......++++..++.  ...+++..++..++++++.+.|++.+++++..+ 
T Consensus       352 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~  429 (515)
T 2jis_A          352 GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--DQGLERRIDQAFVLARYLVEEMKKREGFELVMEP  429 (515)
T ss_dssp             CC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC
T ss_pred             cCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence                111 0          0000      011344444444443  355778888899999999999998866566543 


Q ss_pred             CccEEEEeeCCCC------CCCh--------HHHHHHHHHhcCeEEecCCC-CCCCCeEEEEe-cC-CCHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEK------HLDD--------FEVVRWLAHRHGVVVIPGGA-CGCRGHLRISF-GG-LVEDDCKAAADRL  377 (398)
Q Consensus       315 ~~~~~~~~~~~~~------~~~~--------~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~-~~-~~~~~~~~~~~~l  377 (398)
                      ..+.+.+...+..      ..+-        ..+...+. +.|+.+..... .+..+++|+++ +. .+++++++++++|
T Consensus       430 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l  508 (515)
T 2jis_A          430 EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNEL  508 (515)
T ss_dssp             SSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            3344433333321      0010        12445554 66865532111 12346899999 45 7899999999999


Q ss_pred             HHHHHH
Q 015890          378 RRGLEE  383 (398)
Q Consensus       378 ~~~~~~  383 (398)
                      ++++++
T Consensus       509 ~~~~~~  514 (515)
T 2jis_A          509 ERLGQD  514 (515)
T ss_dssp             HHHHTT
T ss_pred             HHHHhh
Confidence            887643

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.94  E-value=2.3e-24  Score=201.96  Aligned_cols=316  Identities=14%  Similarity=0.112  Sum_probs=216.8

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh--
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL--  109 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l--  109 (398)
                      ++++..+.+  ..++++++++.+.+.+.   .|.+..+..++++.+++++    +.+  ++++++++++++..++.++  
T Consensus         3 ~~~~~~~~~--~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~~i~~~sGt~a~~~al~~~~~   71 (390)
T 3b8x_A            3 MINYPLASS--TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF----GSK--YAVMVSSGSTANLLMIAALFF   71 (390)
T ss_dssp             --CBCSCCC--CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHTTS
T ss_pred             ceeccCCCC--CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH----CCC--cEEEECCHHHHHHHHHHHHHh
Confidence            344444433  35789999998887652   3556677788999999988    432  5778888889999999998  


Q ss_pred             -----ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015890          110 -----CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER  184 (398)
Q Consensus       110 -----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~  184 (398)
                           .++||+|+++.++|+++...++..|++++.+ +.+++++.+|+++|++.++++  +++|++++   ++|...+  
T Consensus        72 ~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~---~~g~~~~--  143 (390)
T 3b8x_A           72 TKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFV-DIDINTLNIDIESLKEAVTDS--TKAILTVN---LLGNPNN--  143 (390)
T ss_dssp             SSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHCCTT--EEEEEEEC---GGGCCCC--
T ss_pred             hhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCccccCcCHHHHHHHhCcC--CeEEEEEC---CccChhh--
Confidence                 7889999999999999999999999999999 887665788999999999865  48888873   5676677  


Q ss_pred             HHHHHHHHHHHcCCEEEEeece-ecc--CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY-FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~-~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                       +++|.++|+++|+++|+|++| ++.  .+..... ..+...+....+|.++ +| +.|++++++  +++.+.+......
T Consensus       144 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~-~~~~~~~s~~~~k~~~-~g-~gG~~~~~~--~~l~~~~~~~~~~  217 (390)
T 3b8x_A          144 -FDEINKIIGGRDIILLEDNCESMGATFNNKCAGT-FGLMGTFSSFYSNHIA-TM-EGGCIVTDD--EEIYHILLCIRAH  217 (390)
T ss_dssp             -HHHHHHHHTTSCCEEEEECTTCTTCEETTEETTS-SSSEEEEECCTTSSSC-SS-SCEEEEESC--HHHHHHHHHHTBT
T ss_pred             -HHHHHHHHHHcCCEEEEECcCcccCEECCccccc-ccceEEEEccCCCCCc-cC-CceEEEeCC--HHHHHHHHHHHhc
Confidence             999999999999999999999 332  2211111 1111122222355553 33 348988874  4666655543211


Q ss_pred             -------------------------------CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          262 -------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       262 -------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                                                     ..+..+....+++...+    +++++..++.+++++++.+.|++++++.
T Consensus       218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l----~~l~~~~~~~~~~~~~l~~~L~~~~~~~  293 (390)
T 3b8x_A          218 GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL----KKLPRFISVRRKNAEYFLDKFKDHPYLD  293 (390)
T ss_dssp             TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred             CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence                                           01114444444444444    3466777888888999999998876545


Q ss_pred             cccC--Ccc-EEEEeeCCCC-CCChHHHHHHHHHhcCeEEec---CCCCCC-C---------------------CeEEEE
Q 015890          311 VKGG--EGA-IYLWARLPEK-HLDDFEVVRWLAHRHGVVVIP---GGACGC-R---------------------GHLRIS  361 (398)
Q Consensus       311 ~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~---g~~~~~-~---------------------~~iRi~  361 (398)
                      +..+  ... ..+++.++.. ..+..++...| .++||.+++   ++.|.. +                     +.||++
T Consensus       294 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~  372 (390)
T 3b8x_A          294 VQQETGESSWFGFSFIIKKDSGVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVG  372 (390)
T ss_dssp             ECCCCSBCCCCEEEEEECTTSCCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEE
T ss_pred             cCCCCCCcccEEEEEEecCcCcccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEee
Confidence            5443  222 2355555521 23567777777 478999987   332222 1                     259999


Q ss_pred             ecC-CCHHHHHHHHHHH
Q 015890          362 FGG-LVEDDCKAAADRL  377 (398)
Q Consensus       362 ~~~-~~~~~~~~~~~~l  377 (398)
                      ++. .+++|++++++.|
T Consensus       373 ~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          373 NHQIELFDEIDYLREVL  389 (390)
T ss_dssp             CCSSCCHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHhh
Confidence            998 8999999988876

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.93  E-value=1e-25  Score=214.17  Aligned_cols=283  Identities=10%  Similarity=0.052  Sum_probs=189.1

Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC--CCC-C--C
Q 015890           74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK-T--L  148 (398)
Q Consensus        74 ~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~-~--~  148 (398)
                      .+.+.+.+.+ ++.+ +++++++|+|+++..++.+++++||+|+++.++|+++...+...|++++++ +.  +++ +  +
T Consensus        59 ~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~~  135 (446)
T 2x3l_A           59 ILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFI-ETHQSPLTNHYN  135 (446)
T ss_dssp             HHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEEC-EEEECTTTSSEE
T ss_pred             HHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEE-eCeeccccCcCC
Confidence            3444455555 5665 679999999999999999999999999999999999999999999999888 55  432 1  3


Q ss_pred             CCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEE
Q 015890          149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       149 ~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~  225 (398)
                      .+|++.|   +.++  +++|++++ .|++|.+.+   +++|+++|+++|+++|+||+|   +.+.+.+......+.++++
T Consensus       136 ~~d~~~l---~~~~--~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~  206 (446)
T 2x3l_A          136 KVNLSRL---NNDG--HKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVV  206 (446)
T ss_dssp             EEEC------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEE
T ss_pred             CCCHHHH---cCCC--ceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEE
Confidence            5677777   3333  58999998 456999999   899999999999999999998   3343322222222335889


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCCchH-HHHHHHHHHHHHHHHHHHh
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL  303 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l  303 (398)
                      .|+||+++ ++.++||+++++..-+ ...+..... ....+++....+++..+++..... .++..++..++.+.+++. 
T Consensus       207 ~S~~K~l~-~~~g~g~l~~~~~~i~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-  283 (446)
T 2x3l_A          207 QSFHKTLP-ALTMGSVLYIHKNAPY-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-  283 (446)
T ss_dssp             ECHHHHSS-SCTTCEEEEEETTCTT-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred             ECCccccc-cccccEEEEEcCCcCC-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence            99999664 3445799998853211 223322211 123344444444443333321110 122444555555555555 


Q ss_pred             ccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe-cCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          304 SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                         + +.+..+.++.++++.++  ..+..++.+.|. ++||.+. ++     .+++|++++. .+++++ +++++|.+++
T Consensus       284 ---g-~~~~~~~~~~~l~i~~~--~~~~~~l~~~L~-~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~~  350 (446)
T 2x3l_A          284 ---G-FEMLQVDDPLKLLIKYE--GFTGHDIQNWFM-NAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKIE  350 (446)
T ss_dssp             ---T-CEEEECSSTTEEEEECT--TSCHHHHHHHHH-HTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHHH
T ss_pred             ---C-CEECcCCCCeEEEEEeC--CcCHHHHHHHHH-HCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHHH
Confidence               3 35555444557888886  236778888776 6699997 43     4689999987 678889 9999999887


Q ss_pred             HHH
Q 015890          382 EEL  384 (398)
Q Consensus       382 ~~~  384 (398)
                      +.+
T Consensus       351 ~~~  353 (446)
T 2x3l_A          351 DMI  353 (446)
T ss_dssp             TCC
T ss_pred             Hhh
Confidence            655

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=1.8e-24  Score=204.33  Aligned_cols=281  Identities=18%  Similarity=0.154  Sum_probs=189.0

Q ss_pred             cHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCC
Q 015890           70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS  145 (398)
Q Consensus        70 ~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~  145 (398)
                      ..++++.+++++    +.+  ..++++++++|+..++.+++++||+|+++.++|++....+    +..|++++.+ + +.
T Consensus        60 ~~~l~~~la~~~----g~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~  131 (421)
T 2ctz_A           60 VDVLEKRLAALE----GGK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-S-RE  131 (421)
T ss_dssp             HHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-C-TT
T ss_pred             HHHHHHHHHHHh----CCC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C-CC
Confidence            466777777766    443  3455666699999999999999999999999998877654    7789988766 2 21


Q ss_pred             CCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEE
Q 015890          146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       146 ~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i  223 (398)
                      +    |++++++.+++++  ++|++++|+||+|.+.|   +++|.++|+++|+++|+|++|  +++.+.+.   ..+.++
T Consensus       132 ~----d~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~~~~---~~~~Di  199 (421)
T 2ctz_A          132 E----RPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLLRPL---AWGAAL  199 (421)
T ss_dssp             C----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSCCGG---GGTCSE
T ss_pred             C----CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccCCcc---ccCCeE
Confidence            1    7999999998754  99999999999999999   999999999999999999999  45433222   223458


Q ss_pred             EEcccccccCCCcceeEEEEccCCcHHH----HHHHHHh--------------------------hccCCCCcchHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEVEGF----ATQLLKV--------------------------QDNIPICASIISQHL  273 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~----~~~l~~~--------------------------~~~~~~~~~~~~~~~  273 (398)
                      ++.|++|.++.+|.++|++++.++.+++    .+.+...                          ........++...++
T Consensus       200 ~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~  279 (421)
T 2ctz_A          200 VTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWV  279 (421)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred             EEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence            8999999999889899987774210111    1112110                          011122445555455


Q ss_pred             HHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-C-----------------CccEEEEeeCCCCCCChHHHH
Q 015890          274 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----------------EGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       274 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      +...++.    +..+.++..++.+++.+.|++++.+..+. |                 ..+..+.+.+..    ..+..
T Consensus       280 ~~~~l~~----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~----~~~~~  351 (421)
T 2ctz_A          280 VLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG----GYEAA  351 (421)
T ss_dssp             HHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT----HHHHH
T ss_pred             HHcCcch----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC----CHHHH
Confidence            5555543    44555666678888999998876644431 1                 124556667653    12223


Q ss_pred             HHHHHhc---CeEEecCCCC----------------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          336 RWLAHRH---GVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       336 ~~ll~~~---gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ..++++.   ++.++.|..+                      + .++.||+|++.   ++++++++.|.+++
T Consensus       352 ~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~---e~~~~li~~l~~al  420 (421)
T 2ctz_A          352 KRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL  420 (421)
T ss_dssp             HHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred             HHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHh
Confidence            3344343   4444444221                      0 14789999886   67888888888765

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.93  E-value=4.9e-24  Score=200.27  Aligned_cols=333  Identities=13%  Similarity=0.086  Sum_probs=218.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.... ..+.....++.+.+++.+    + ..+.+.+++++++|+.
T Consensus        84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p-~~~~v~f~~SGsEA~e  157 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P-QIEQLRFTNSGTEANL  157 (454)
T ss_dssp             TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C-CCCEEEEeCchHHHHH
Confidence            3578999998764  3343 5899999999998764322 213333344544444443    3 3578999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhc------CcEEEEeccCCCCCCCCChHHHHHhhcc-CCCCeEEEEeCCC
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPG  174 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~  174 (398)
                      .+++...  ...++|+....+|++....+-..      ......+ |.      -|++.+++.++. ...+++|+++..+
T Consensus       158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-p~------nd~~~l~~~l~~~~~~iAavIvEPv~  230 (454)
T 4ao9_A          158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVL-PY------NDAQTARAQIERHGPEIAVVLVEPMQ  230 (454)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEE-CT------TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred             HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccC-CC------chHHHHHHHHhhcCCceEEEEecccc
Confidence            9998875  23478999999998865322111      1122222 21      278899998873 2336888888767


Q ss_pred             CCCccC-CCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHH
Q 015890          175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT  253 (398)
Q Consensus       175 nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~  253 (398)
                      +..|.+ .+++.+++|.++|++||+++|+||++.+..|........+....+.+++|.+| .|+++|+++++   +++++
T Consensus       231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t~gK~lg-gG~Piga~~~~---~ei~~  306 (454)
T 4ao9_A          231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTTLGKYIG-GGMSFGAFGGR---ADVMA  306 (454)
T ss_dssp             STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEEEEGGGG-TTSSCEEEEEC---HHHHG
T ss_pred             CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEEeccccC-CCCcceeeeeH---HHHHH
Confidence            778875 56788999999999999999999999433332221111111112337789998 88999999999   78887


Q ss_pred             HHHHh----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          254 QLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       254 ~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      .+...    ....+++.|+.+.+++.+.|+..  ++.+++..+.-.+.++.|.+.+++.+.+..+... |.++.+.+.+.
T Consensus       307 ~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~m~gi~f~~~  385 (454)
T 4ao9_A          307 LFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGI-GSLMNAHFVQG  385 (454)
T ss_dssp             GGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE-TTEEEEESCCS
T ss_pred             HHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee-ceEEEEEEecC
Confidence            66432    23456778899999999988752  2334444444455556666665555554344444 44444444221


Q ss_pred             C---------CC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          328 H---------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       328 ~---------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .         .+   ...++..++ ++||++.|.      +.+.+++. .+++|+++++++|.+++.+..
T Consensus       386 ~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~------~~~~~s~~-~T~~dId~~l~al~~~l~~~~  447 (454)
T 4ao9_A          386 DVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR------GFVVLSLP-LTDADIDRYVAAIGSFIGGHG  447 (454)
T ss_dssp             CCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT------CEEECCTT-CCHHHHHHHHHHHHHHHHHSG
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC------CCEEEeCC-CCHHHHHHHHHHHHHHHHhcc
Confidence            1         01   123445555 789999774      34445555 589999999999999998864

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.92  E-value=3.2e-24  Score=197.40  Aligned_cols=323  Identities=13%  Similarity=0.073  Sum_probs=220.6

Q ss_pred             CCCCCcHHHHHHHHHhhcCCC---CCC---CCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEE-ecChHHHHHHHHHHhcc
Q 015890           40 VYWQPPKMAMEKVKELVWDPS---ISK---YGADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLCD  111 (398)
Q Consensus        40 ~~~~~~~~v~~a~~~~~~~~~---~~~---y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~-~~g~t~a~~~~~~~l~~  111 (398)
                      ...+.|++|++++.+.+.+..   .+.   +..+....++.+..++.+++++++++ .+|++ ++|+|+++++++.++..
T Consensus        20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~   99 (377)
T 3e77_A           20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIG   99 (377)
T ss_dssp             CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGG
T ss_pred             ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccC
Confidence            566789999999999886411   111   11222234455555555666668764 57888 58999999999999986


Q ss_pred             C--CCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          112 A--GDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       112 ~--gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +  ||+|++...++++  +...++..|..++.+ +.+.. ...+++.++..+++++  ++|.+++..|.||++.|   + 
T Consensus       100 ~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~-~~~~~-~~~~~~~~~~~i~~~t--~lV~~~h~et~tG~~~p---i-  171 (377)
T 3e77_A          100 LKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH-PKLGS-YTKIPDPSTWNLNPDA--SYVYYCANETVHGVEFD---F-  171 (377)
T ss_dssp             GSTTCEEEECCCSHHHHHHHHHHTTTSEEEECS-CCCSS-SCSCCCGGGCCCCTTC--SCEEEESEETTTTEECS---S-
T ss_pred             CCCCCeEEEEECCHHHHHHHHHHHHhCCceEEe-ccCCC-cCCCCChHHhccCCCc--cEEEEeCccCchheEch---h-
Confidence            5  8999887777654  445667778877766 66533 3456777777777665  89999988899999999   4 


Q ss_pred             HHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCc--------HHHHH-HHHH
Q 015890          188 RISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFAT-QLLK  257 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~--------~~~~~-~l~~  257 (398)
                          +|+++|+++++|.++ ++......  ...+  +++.|.+|++|++|  +|+++.+++.        +.+.+ ....
T Consensus       172 ----i~~~~~~~~~vD~~q~~g~~~id~--~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~  241 (377)
T 3e77_A          172 ----IPDVKGAVLVCDMSSNFLSKPVDV--SKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQA  241 (377)
T ss_dssp             ----CCCCTTCCEEEECTTTTTSSCCCG--GGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHH
T ss_pred             ----hhccCCCEEEEEcccccCCCCCch--hhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHh
Confidence                367899999999999 66533332  2233  46789999999888  5777776422        11111 0011


Q ss_pred             hhccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCCcccc--C--CccEEEEeeCCCCCCC-
Q 015890          258 VQDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARLPEKHLD-  330 (398)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~--~~~~~~~~~~~~~~~~-  330 (398)
                      .......+++.+...++.++++... . .++++.++.+++.+++++.|++++++.+..  +  ..+..+.+.++....+ 
T Consensus       242 ~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~  321 (377)
T 3e77_A          242 GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDD  321 (377)
T ss_dssp             TTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCH
T ss_pred             hcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCch
Confidence            1122356788888888888887522 3 578888899999999999999886544322  1  2233455666532111 


Q ss_pred             --hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          331 --DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       331 --~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                        +..+...+. ++||.+++|..  ..+.+|+|+.. .+++|++++++.|++++++
T Consensus       322 ~~~~~~l~~l~-~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          322 ALEKRFLDKAL-ELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             HHHHHHHHHHH-HTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHH-HCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence              134556554 78999988753  35679999988 7999999999999988765

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.92  E-value=1.3e-23  Score=192.65  Aligned_cols=323  Identities=13%  Similarity=0.106  Sum_probs=220.6

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCC---CCCC---CCCCCcHHHHHHHHHHHhhhcCCC-CCcEEE-ecChHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKY---GADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQA  101 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y---~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~-~~g~t~a  101 (398)
                      +..++|+.|  +.+.|++|++++.+.+.+..   .+.|   .......++.+..++.++++++++ +.+|+| |+|+|++
T Consensus         4 ~~~~~f~pg--pt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a   81 (361)
T 3m5u_A            4 MRKINFSAG--PSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQ   81 (361)
T ss_dssp             CCCEECCSS--SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHH
T ss_pred             cceEeecCC--CCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHH
Confidence            456677766  55678999999999875311   1111   112222344555555566666875 457888 9999999


Q ss_pred             HHHHHHHhccCCCEEEEeCCCCc--ChhhHHHhcCcEEEEeccCCCCC-CCCChHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015890          102 FVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG  178 (398)
Q Consensus       102 ~~~~~~~l~~~gd~Vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG  178 (398)
                      +++++.++. +||++++...+++  .+...++..|+++..+ +.+.++ +.++++. +  +++++  ++|.+++..|.||
T Consensus        82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~-~~~~~g~~~~~~~~-~--l~~~t--~lv~~~~~e~~tG  154 (361)
T 3m5u_A           82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTV-ASSEESNFDHIPRV-E--FSDNA--DYAYICSNNTIYG  154 (361)
T ss_dssp             HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEE-EECTTTTSCSCCCC-C--CCTTS--SEEEEESEETTTT
T ss_pred             HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEE-ecccCcCCCcCChh-h--cCCCC--CEEEEeCCCCCcc
Confidence            999999998 7887643333332  3445667789998888 777665 2245555 4  77654  9999998888999


Q ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015890          179 TYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK  257 (398)
Q Consensus       179 ~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~  257 (398)
                      ++.+.        +++ +|+++++|.++ ++.......    +-++++.|.+|++|++|  +|+++.+   +++.+.+..
T Consensus       155 ~~~~~--------i~~-~~~~~~vD~~q~~g~~~id~~----~~d~~~~s~~K~~gp~G--~g~l~~~---~~~~~~~~~  216 (361)
T 3m5u_A          155 TQYQN--------YPK-TKTPLIVDASSDFFSRKVDFS----NIALFYGGVQKNAGISG--LSCIFIR---KDMLERSKN  216 (361)
T ss_dssp             EECSS--------CCC-CSSCEEEECGGGTTSSCCCCT----TEEEEEEETTTTSSCTT--CEEEEEE---HHHHHHHHT
T ss_pred             eeCCc--------ccc-cCCEEEEEcccccCCCCCCcc----cCCEEEEechhccCCCc--cEEEEEc---HHHHhhhcC
Confidence            98762        233 49999999999 655333222    13478889999999777  5888888   677665543


Q ss_pred             -----------h--hccCCCCcchHHHHHHHHHhcCCc-h-HHHHHHHHHHHHHHHHHHHhccCCCC-cccc-C--CccE
Q 015890          258 -----------V--QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEG-AVKG-G--EGAI  318 (398)
Q Consensus       258 -----------~--~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~--~~~~  318 (398)
                                 .  ......|+|.+...++.++++... . .+++..++.+++.+++++.|++++++ .... +  ....
T Consensus       217 ~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~  296 (361)
T 3m5u_A          217 KQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLM  296 (361)
T ss_dssp             CCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSS
T ss_pred             CCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCe
Confidence                       0  122345778888888888887522 2 37888888999999999999988853 3322 1  1123


Q ss_pred             EEEeeCCC-CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          319 YLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       319 ~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+.+.++. ...+ .++...| +++||.+++|...  .+.+|+|++. .+.+|++++++.|+++.++
T Consensus       297 ivsf~~~~~~~~~-~~~~~~L-~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          297 NVSFNIAKNKDLE-PLFVKEA-EEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             EEEEEESSCTTHH-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCchhhh-HHHHHHH-HHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence            45566653 1112 4566555 6889999887542  3569999998 7999999999999988765

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.92  E-value=2e-23  Score=197.05  Aligned_cols=346  Identities=14%  Similarity=0.076  Sum_probs=224.6

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|  ...++ .+|++.+|+.+++.+.....+...  ..+....+++.+.+..+.+ .+.+++++++++|+
T Consensus        61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~  138 (456)
T 4atq_A           61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVT--PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAV  138 (456)
T ss_dssp             TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTS--CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCcc--CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHH
Confidence            358899999876  44454 589999999998865321111111  1233345566665555433 46789999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-C-------------cEEEEeccCCC-----CCCCCChHHHHHhh--
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-------------VTHILVGPCSS-----KTLHPDADWLEKTL--  159 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~-----~~~~~d~e~l~~~l--  159 (398)
                      +.+++...  ....+|+....+|++....+... +             ..+..+ |.+.     .....+.+.+++.+  
T Consensus       139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~  217 (456)
T 4atq_A          139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRM-PMSYPFREENPEITGAEAAKRAITM  217 (456)
T ss_dssp             HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCGGGCSSTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceec-ccccccccCCCcccHHHHHHHHHHH
Confidence            99998764  33479999999999876433221 1             123333 3211     00011233333322  


Q ss_pred             -----ccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccc
Q 015890          160 -----ETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKA  231 (398)
Q Consensus       160 -----~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~  231 (398)
                           ...+ +++|+++..+...|.+ .+++.++++.++|++||+++|+||++  |+..|........+....+-+++|.
T Consensus       218 ~e~~~~~~~-iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~  296 (456)
T 4atq_A          218 IEKQIGGDQ-VAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKG  296 (456)
T ss_dssp             HHHHTCGGG-EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGG
T ss_pred             HHHhhcCCc-eEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhc
Confidence                 2333 7889999777778875 56789999999999999999999999  6666654443333222224477899


Q ss_pred             cCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCC-
Q 015890          232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGE-  308 (398)
Q Consensus       232 ~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~-  308 (398)
                      +| .|+++|.++++   +++.+.+.......+++.++.+.+++.+.|+..+  +..++..+.-....+.|.+..++++. 
T Consensus       297 lg-gg~P~~av~~~---~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~  372 (456)
T 4atq_A          297 IA-GGLPLSAITGR---ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAG  372 (456)
T ss_dssp             GG-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred             cc-CcCCceeeEec---HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            97 88999999999   7888777666667788999999999999987522  23333333333344555555444332 


Q ss_pred             ----CccccCCccEEEEeeCCCCCC---C---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 015890          309 ----GAVKGGEGAIYLWARLPEKHL---D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL  377 (398)
Q Consensus       309 ----~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l  377 (398)
                          +.-+... |.++.+++.+...   +   ...++..++ ++|+++.++..  ..+.|||.... .+++++++++++|
T Consensus       373 ~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~l  448 (456)
T 4atq_A          373 GGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEVL  448 (456)
T ss_dssp             ---CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             cCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence                2223344 5566666632211   1   234666665 89999876432  24689999776 7999999999999


Q ss_pred             HHHHHHH
Q 015890          378 RRGLEEL  384 (398)
Q Consensus       378 ~~~~~~~  384 (398)
                      .+++++.
T Consensus       449 ~~al~a~  455 (456)
T 4atq_A          449 AAAIKAH  455 (456)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhh
Confidence            9999863

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.92  E-value=8.1e-23  Score=202.88  Aligned_cols=303  Identities=11%  Similarity=0.011  Sum_probs=202.5

Q ss_pred             CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-HHhcCcEEEEeccCCC
Q 015890           67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSS  145 (398)
Q Consensus        67 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~  145 (398)
                      .....++++.+++++    |.+ ..+++++|+++++..++.+++++||+|+++.++|.++... ++..|++++.+ +...
T Consensus       172 ~~~i~e~e~~lA~~~----gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v-~~~~  245 (730)
T 1c4k_A          172 EGPAVAAEKHAARVY----NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYL-QTNR  245 (730)
T ss_dssp             BTHHHHHHHHHHHHT----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEE-CEEE
T ss_pred             hHHHHHHHHHHHHHH----CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEE-eCCc
Confidence            334466777776665    654 3478889999999999999999999999999999988887 78889998887 5432


Q ss_pred             CCC----CCChHHH-----HHhhccC------C-CC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--
Q 015890          146 KTL----HPDADWL-----EKTLETK------P-TP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--  206 (398)
Q Consensus       146 ~~~----~~d~e~l-----~~~l~~~------~-~~-~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--  206 (398)
                      +.+    .+|+++|     +++++++      + .+ +++++++| |++|.+.+   +++|+++|+++|+++|+||+|  
T Consensus       246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~  321 (730)
T 1c4k_A          246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG  321 (730)
T ss_dssp             CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred             cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence            222    3688888     8888754      2 23 89999998 58999999   999999999999999999999  


Q ss_pred             -eccCCCc-----ccc----ccCCcEEEEcccccccCCCccee-EEEEccCCc----HHH--HHHHHHhh-ccCCCCcch
Q 015890          207 -FMYDGRK-----HCC----VEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEV----EGF--ATQLLKVQ-DNIPICASI  268 (398)
Q Consensus       207 -~~~~~~~-----~~~----~~~~~~i~~~s~sK~~~~~G~r~-G~i~~~~~~----~~~--~~~l~~~~-~~~~~~~~~  268 (398)
                       +.+.+..     ...    ...++++++.|+||+++  |++. |++++++..    +..  ...+.... ...+.+++.
T Consensus       322 ~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~  399 (730)
T 1c4k_A          322 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFY  399 (730)
T ss_dssp             GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCH
T ss_pred             ccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcH
Confidence             2343211     111    11235689999999875  5554 456444310    000  12222211 122345555


Q ss_pred             HHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhcc-CCCCccccCC-------------------------------
Q 015890          269 ISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSP-LGEGAVKGGE-------------------------------  315 (398)
Q Consensus       269 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~-------------------------------  315 (398)
                      ...+++..+++.... ...+..++..++.+.+++.|++ ++++++..+.                               
T Consensus       400 ~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  479 (730)
T 1c4k_A          400 PMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWH  479 (730)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTT
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhc
Confidence            555555555543112 3455566777777778877776 4444443321                               


Q ss_pred             ------cc-EE-----EEeeCCC----------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHH
Q 015890          316 ------GA-IY-----LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA  372 (398)
Q Consensus       316 ------~~-~~-----~~~~~~~----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~  372 (398)
                            .+ ++     +.+..+.          ...+..++.++|. ++||.+...    ....+|++++. .+.+++++
T Consensus       480 g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~-e~GI~v~~~----~~~~ir~~~s~g~t~e~i~~  554 (730)
T 1c4k_A          480 AYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLR-DHGIIPEKS----DLNSILFLMTPAETPAKMNN  554 (730)
T ss_dssp             CCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHH-HTTCCCSEE----CSSEEEEECCTTCCHHHHHH
T ss_pred             cccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHH-HCCcEEEEC----CCCeEEEEeCCCCCHHHHHH
Confidence                  11 11     3455531          1235677777775 679988653    35789999888 78999999


Q ss_pred             HHHHHHHHHHHHhc
Q 015890          373 AADRLRRGLEELVK  386 (398)
Q Consensus       373 ~~~~l~~~~~~~~~  386 (398)
                      ++++|.+..+.+.+
T Consensus       555 Ll~aL~~i~~~~~~  568 (730)
T 1c4k_A          555 LITQLLQLQRLIEE  568 (730)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhccc
Confidence            99999999887643

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.92  E-value=3.1e-24  Score=198.61  Aligned_cols=317  Identities=12%  Similarity=0.039  Sum_probs=210.5

Q ss_pred             CCCCcHHHHHHHHHhhcCCC---CC-----CCC--CCCCcHHHHHHHHHHHhhhcCCCC-CcEEE-ecChHHHHHHHHHH
Q 015890           41 YWQPPKMAMEKVKELVWDPS---IS-----KYG--ADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLT  108 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~---~~-----~y~--~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~-~~g~t~a~~~~~~~  108 (398)
                      +.+.|++|++++.+.+.+..   .+     ..+  ...-..+.|+.+++++    +++. .+|++ ++|+|+++++++.+
T Consensus        35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~~~~~~evif~t~~~T~a~n~ai~~  110 (386)
T 3qm2_A           35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----NIPSNYKVLFCHGGGRGQFAGVPLN  110 (386)
T ss_dssp             SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----TCCTTEEEEEEESCTTHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHHh
Confidence            44578999999988764311   11     111  1244566777777776    6643 46888 68999999999999


Q ss_pred             hccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC-CCH
Q 015890          109 LCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPE  183 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~-~~~  183 (398)
                      +.++||+|++...++++  +...++..| ++..+ +.+  ++|..++++.++..+++++  ++|.+++..|.||++ .| 
T Consensus       111 l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v-~~~~~~~G~~~~~~~~~~~l~~~t--~lV~~~h~et~tG~~i~p-  185 (386)
T 3qm2_A          111 LLGDKTTADYVDAGYWAASAIKEAKKYC-APQII-DAKITVDGKRAVKPMREWQLSDNA--AYLHYCPNETIDGIAIDE-  185 (386)
T ss_dssp             HCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEE-ECEEEETTEEEECCGGGCCCCTTC--SCEEECSEETTTTEECCC-
T ss_pred             ccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE-ecCcccCCCCCCchHHHhhcCCCC--cEEEEECCcCCcCEecCc-
Confidence            99999998766555544  445567778 88888 776  5564467788888888765  889988888889996 78 


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCc--------HHHHHH
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFATQ  254 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~--------~~~~~~  254 (398)
                        +++|.     +|+++++|.++ ++.......  ..+  +++.|.+|++|++|  +|+++++++.        +.+.+.
T Consensus       186 --i~~i~-----~g~~~~vDa~qs~g~~pidv~--~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~  252 (386)
T 3qm2_A          186 --TPDFG-----PEVVVTADFSSTILSAPLDVS--RYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDY  252 (386)
T ss_dssp             --CCCCC-----TTCCEEEECTTTTTSSCCCGG--GCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCH
T ss_pred             --hhhhc-----CCCEEEEEcccccCCCCCCcc--ccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHH
Confidence              55553     79999999999 665333322  233  46689999999777  6888777421        101100


Q ss_pred             H-HHhhccCCCCcchHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHHHhccCCCCccc-c--CCccEEEEeeCCCCC
Q 015890          255 L-LKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVK-G--GEGAIYLWARLPEKH  328 (398)
Q Consensus       255 l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~--~~~~~~~~~~~~~~~  328 (398)
                      - .........|+|.+...++.++++...+  .+++..++.+++++++++.|++++..... .  ......+.+.++...
T Consensus       253 ~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~  332 (386)
T 3qm2_A          253 TVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNT  332 (386)
T ss_dssp             HHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGG
T ss_pred             HHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcc
Confidence            0 0011122346777788888888775333  47888888999999999999887642221 1  122345566665322


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+ ..+...| +++||.++.|..+  .+.+|+|+.. .+++|++++++.|+++.++
T Consensus       333 ~~-~~~~~~L-~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          333 LD-KVFLEES-FAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR  384 (386)
T ss_dssp             GH-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cc-HHHHHHH-HHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            22 5666665 6899999887644  3569999988 7899999999999988765

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.92  E-value=2.3e-23  Score=194.55  Aligned_cols=271  Identities=15%  Similarity=0.099  Sum_probs=187.2

Q ss_pred             cHHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE---ecChHHHHHHHHHHhccCCCE
Q 015890           45 PKMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDS  115 (398)
Q Consensus        45 ~~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~  115 (398)
                      ..++++++.+....      ...+.| +..+..++++.+++++    +.  +..++   ++|+++|+..++.+++++||+
T Consensus        31 ~~~vl~a~~~~~~~~~~~~~~~~~~y-~~~~~~~Le~~lA~l~----g~--e~alv~p~~~sGt~Ai~~al~all~~GD~  103 (409)
T 3jzl_A           31 QAKVLDAFQENKVSDFHFHPSTGYGY-DDEGRDTLERVYATVF----KT--EAALVRPQIISGTHAISTVLFGILRPDDE  103 (409)
T ss_dssp             HHHHHHHHHHTTCCGGGGCCCCTTCT-TCHHHHHHHHHHHHHH----TC--SEEEEETTSCSHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHHHHHHHhhhhhhccCCCcCCCC-ChhHHHHHHHHHHHHh----CC--CcEEEECCCccHHHHHHHHHHHhcCCCCE
Confidence            36788888875421      113334 2334556666666665    54  33444   889999999999999999999


Q ss_pred             EEEeC-CCCcChhh----------HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccC
Q 015890          116 VVMFA-PYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTY  180 (398)
Q Consensus       116 Vl~~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~  180 (398)
                      |+++. +.|.++..          .++..|++++.+ +.+++ +.+|++++++++++++  ++|++++    |+||||.+
T Consensus       104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v-~~~~~-g~~d~e~l~~ai~~~t--klV~i~~s~g~p~nptg~v  179 (409)
T 3jzl_A          104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV-PLLEN-GDVDFPRIAKKMTPKT--KMIGIQRSRGYADRPSFTI  179 (409)
T ss_dssp             EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC-CCCTT-SCCCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCH
T ss_pred             EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe-CCCCC-CCcCHHHHHHhccCCC--eEEEEECCCCCCCCCcCcc
Confidence            99998 99988774          446779999998 77654 5789999999998764  9999999    99999988


Q ss_pred             CCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHH
Q 015890          181 IPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l  255 (398)
                      .+   +++|+++|++  +|+++|+|++|  +.+...+ .  ..+.+++++|+||.+|.+| ...||++++   +++++.+
T Consensus       180 ~~---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p-~--~~g~Div~~S~sK~lgg~~~~~GG~v~~~---~~li~~l  250 (409)
T 3jzl_A          180 EK---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP-P--EVGADIIAGSLIKNPGGGLAKTGGYIAGK---EALVDLC  250 (409)
T ss_dssp             HH---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS-G--GGTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHH
T ss_pred             cc---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc-c--ccCCeEEEECccccCCccCCceEEEEEeC---HHHHHHH
Confidence            66   9999999999  99999999999  3222211 1  1234588999999998554 346999998   8899888


Q ss_pred             HHhhccC----CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEEEEeeCCCC
Q 015890          256 LKVQDNI----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLWARLPEK  327 (398)
Q Consensus       256 ~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~  327 (398)
                      .......    ..+.......++...+.    ....+.++..+++..+.+.|+++|. .+++...    ...+.+.+.. 
T Consensus       251 ~~~~~~~~~g~~~g~~~~~~~~~l~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~-  324 (409)
T 3jzl_A          251 GYRLTTPGIGREAGASLYSLLEMYQGFF----LAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHN-  324 (409)
T ss_dssp             HHHHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSC-
T ss_pred             HHHhccccccccccccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCC-
Confidence            7643211    11221211233333332    3456777788889999999999887 5543221    1255566652 


Q ss_pred             CCChHHHHHHHHHhc
Q 015890          328 HLDDFEVVRWLAHRH  342 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~  342 (398)
                      ......+++.|. ..
T Consensus       325 ~~~~~~~~~~L~-~~  338 (409)
T 3jzl_A          325 KEKMVAFAQAIQ-AA  338 (409)
T ss_dssp             HHHHHHHHHHHH-HT
T ss_pred             HHHHHHHHHHHH-hc
Confidence            224456677664 44

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.91  E-value=1.8e-22  Score=191.23  Aligned_cols=345  Identities=13%  Similarity=0.090  Sum_probs=225.0

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCC-CcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADE-GLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~-~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ -+|++.+|+.+++.+.  ..|.... ...+....+++.|.+..+.+.+.|++++|+++|+
T Consensus        64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l--~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~  141 (473)
T 4e3q_A           64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERF--PGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAN  141 (473)
T ss_dssp             TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHC--CCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHH
T ss_pred             CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhc--ccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHH
Confidence            3588999998764  3333 5899999999998762  2222221 1234455677777766665667899999999999


Q ss_pred             HHHHHHhc-------cCC-CEEEEeCCCCcChhhHHHhc-C-----------cEEEEeccCCC------CCCC------C
Q 015890          103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQMT-G-----------VTHILVGPCSS------KTLH------P  150 (398)
Q Consensus       103 ~~~~~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~~-g-----------~~~~~~~~~~~------~~~~------~  150 (398)
                      +.+++...       +++ .+|+....+|++....+-.. |           .....+ +.+.      .+..      .
T Consensus       142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~  220 (473)
T 4e3q_A          142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHL-TCPHYWRYGEEGETEEQFVAR  220 (473)
T ss_dssp             HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEE-CCCCHHHHSCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCccccc-CCCcccccccccchhhHHHHH
Confidence            99998753       133 57999999998855433211 1           112222 2211      1100      0


Q ss_pred             ChHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEE
Q 015890          151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       151 d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~  225 (398)
                      ..+++++.+..  ...+++|+++..+...|++ .+++.+++|.++|++||+++|.||++  |+..|........+....+
T Consensus       221 ~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi  300 (473)
T 4e3q_A          221 LARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDA  300 (473)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSE
T ss_pred             HHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCCh
Confidence            12345555541  1226788888777778875 56779999999999999999999999  6666655443332222224


Q ss_pred             cccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN  295 (398)
Q Consensus       226 ~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~  295 (398)
                      .+++|.++ .| +++|.++++   +++.+.+...       ....+++.++.+.+++.+.|+..  ++.+++..+.-...
T Consensus       301 ~t~~K~l~-gG~~Pl~av~~~---~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l  376 (473)
T 4e3q_A          301 IISSKNLT-AGFFPMGAVILG---PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRF  376 (473)
T ss_dssp             EEECGGGG-TTSSCCEEEEEC---HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred             HHhccccc-CCCCCccccccc---HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHH
Confidence            47789997 55 899999999   7887776432       24567888999999999988752  23334444444444


Q ss_pred             HHHHHHHhccCCCCccccCCccEEEEeeCCCCC----------CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-
Q 015890          296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-  364 (398)
Q Consensus       296 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-  364 (398)
                      ++.|.+ |.+.+.+.-+... |+++.+++.+..          .-...+...++ ++|+++++.     .+.+|++... 
T Consensus       377 ~~~L~~-l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~~i~l~PPL~  448 (473)
T 4e3q_A          377 EERLKH-IAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCT-DLGLICRPL-----GQSVVLCPPFI  448 (473)
T ss_dssp             HHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTT
T ss_pred             HHHHHH-HhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCC
Confidence            455544 3334443333344 555555553211          01334566554 899999874     3689998776 


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhc
Q 015890          365 LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      .+++++++++++|.++++++..
T Consensus       449 it~~eid~~~~~l~~al~~v~a  470 (473)
T 4e3q_A          449 LTEAQMDEMFDKLEKALDKVFA  470 (473)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Confidence            7999999999999999998765

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.91  E-value=3.5e-23  Score=193.95  Aligned_cols=270  Identities=14%  Similarity=0.063  Sum_probs=185.1

Q ss_pred             HHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE--ecChHHHHHHHHHHhccCCCEEE
Q 015890           46 KMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV--TAGANQAFVNIVLTLCDAGDSVV  117 (398)
Q Consensus        46 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~--~~g~t~a~~~~~~~l~~~gd~Vl  117 (398)
                      +.|++++.+....      ...+.| +..+..++++.+++++    |.+.. +++  ++|+++|+..++.+++++||+|+
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y-~~~~~~~Le~~lA~l~----g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl  119 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGY-GDIGRDSLDAVYARVF----NTESA-LVRPHFVNGTHALGAALFGNLRPGNTML  119 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----TCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEE
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCC-CHHHHHHHHHHHHHHh----CCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEE
Confidence            6788888764311      112333 3334556666666665    54332 333  78889999999999999999999


Q ss_pred             EeC-CCCcChh-----------hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccCC
Q 015890          118 MFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYI  181 (398)
Q Consensus       118 ~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~~  181 (398)
                      ++. +.|.++.           ..++..|++++.+ +.++++ .+|++.++++++....+++|++++    |+||+|.+.
T Consensus       120 ~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~~~~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~  197 (427)
T 3i16_A          120 SVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV-DLKEDG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE  197 (427)
T ss_dssp             ESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC-CCCTTS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH
T ss_pred             EeCCCccHHHHHHHhccccchHHHHHHcCCEEEEe-cCccCC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH
Confidence            998 9998776           3456679999998 776554 689999999998312259999998    999998875


Q ss_pred             CHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHH
Q 015890          182 PERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       182 ~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~  256 (398)
                      +   +++|+++|++  +|+++++|++|  +.+...+.   ..+.+++++|+||.+|.+| .+.||++++   +++++.+.
T Consensus       198 d---l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~gG~i~~~---~~li~~l~  268 (427)
T 3i16_A          198 D---IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT---DVGADLIAGSLIKNIGGGIAPTGGYLAGT---KDCIEKTS  268 (427)
T ss_dssp             H---HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHH
T ss_pred             H---HHHHHHHHHHhCCCCEEEEECCCccccccCCcc---ccCCeEEEecCcccCCCCCCceEEEEEEC---HHHHHHHH
Confidence            5   9999999999  99999999999  32222211   1234588999999998555 567999998   89999887


Q ss_pred             HhhccCCCC--cch-HH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE-----EEEeeCCCC
Q 015890          257 KVQDNIPIC--ASI-IS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI-----YLWARLPEK  327 (398)
Q Consensus       257 ~~~~~~~~~--~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~  327 (398)
                      ........+  .++ .. ...+...+    .....+.++..+++..+.+.|+++|. .+++.. +.     .+.+.+.. 
T Consensus       269 ~~~~~~~~g~~~~~~~~~a~~~l~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~-~~~~~~~i~~i~l~~-  341 (427)
T 3i16_A          269 YRLTVPGIGGECGSTFGVVRSMYQGL----FLAPHISMEALKGAILCSRIMELAGF-EVMPKY-DEKRSDIIQSIKFND-  341 (427)
T ss_dssp             HHHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCT-TSCCSSSCEEEECSS-
T ss_pred             HhcccCccCccCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCC-CCCCccEEEEEEECC-
Confidence            643211221  111 21 22222222    33567778888899999999999887 554432 33     56666642 


Q ss_pred             CCChHHHHHHHH
Q 015890          328 HLDDFEVVRWLA  339 (398)
Q Consensus       328 ~~~~~~~~~~ll  339 (398)
                      ......+++.|.
T Consensus       342 ~~~~~~f~~~l~  353 (427)
T 3i16_A          342 KDKLIEFCKGIQ  353 (427)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            223455666664

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.91  E-value=1.2e-22  Score=190.31  Aligned_cols=269  Identities=16%  Similarity=0.089  Sum_probs=183.7

Q ss_pred             HHHHHHHHHhhcC------CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEE---ecChHHHHHHHHHHhccCCCEE
Q 015890           46 KMAMEKVKELVWD------PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        46 ~~v~~a~~~~~~~------~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~---~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      +.|++++.+....      ...+.| +..+..++++.+++++    +.  +..++   ++|+++|+..++.+++++||+|
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~----g~--e~alv~p~~~sGt~A~~~al~all~pGD~V  119 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIF----NT--ESAFVRPHFVNGTHAIGAALFGNLRPNDTM  119 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----TC--SEEEEETTCCSHHHHHHHHHHHTCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHh----CC--CceEEeCCCCcHHHHHHHHHHHhcCCCCEE
Confidence            7888888875432      112334 2335566666666665    54  33455   7888999999999999999999


Q ss_pred             EEeC-CCCcChh-----------hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeC----CCCCCccC
Q 015890          117 VMFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTY  180 (398)
Q Consensus       117 l~~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~----p~nptG~~  180 (398)
                      ++++ +.|.++.           ..++..|++++.+ +.  +++.+|++++++++++..++++|++++    |+||||.+
T Consensus       120 l~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v  196 (427)
T 3hvy_A          120 MSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV-DL--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRI  196 (427)
T ss_dssp             EECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC-CC--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCH
T ss_pred             EEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe-cC--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccH
Confidence            9998 9998776           3456679999988 66  345789999999998311259999999    99999887


Q ss_pred             CCHHHHHHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHH
Q 015890          181 IPERLLKRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l  255 (398)
                      .+   +++|+++|++  +|+++++|++|  +.+...+.   ..+.+++++|+||.+|.+| .+.||++++   +++++++
T Consensus       197 ~d---l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~---~~gaDiv~~S~sK~lgg~g~~~GG~i~~~---~~li~~l  267 (427)
T 3hvy_A          197 AE---IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT---DVGADIIAGSLIKNIGGGIATTGGYIAGK---EEYVTQA  267 (427)
T ss_dssp             HH---HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG---GGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHH
T ss_pred             HH---HHHHHHHHHHhCCCCEEEEECCccccccCCCCc---ccCCeEEEECCcccccccccceEEEEEEC---HHHHHHH
Confidence            65   9999999999  89999999999  32222221   2234588999999997444 456999998   8899988


Q ss_pred             HHhhccCCCC--c-chHH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cEEEEeeCCCC
Q 015890          256 LKVQDNIPIC--A-SIIS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLWARLPEK  327 (398)
Q Consensus       256 ~~~~~~~~~~--~-~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~~~~~~~~~~  327 (398)
                      .........+  . +++. ...+...+    .....+.++..+++..+.+.|+++|. .+++...    ...+.+.+.. 
T Consensus       268 ~~~~~~~~~g~~~~~~~~~a~~~~~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~-  341 (427)
T 3hvy_A          268 TFRVTVPGIGGECGSTFGVMRSLYEGL----FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFND-  341 (427)
T ss_dssp             HHHHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSS-
T ss_pred             HHHhhcCCcccccCCCHHHHHHHHHhH----hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCC-
Confidence            7643211111  1 1122 22233333    22456777788889999999998887 5543321    1266667652 


Q ss_pred             CCChHHHHHHHH
Q 015890          328 HLDDFEVVRWLA  339 (398)
Q Consensus       328 ~~~~~~~~~~ll  339 (398)
                      ......+++.|.
T Consensus       342 ~~~~~~f~~~l~  353 (427)
T 3hvy_A          342 EKKLIDFIKGIQ  353 (427)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            223445666553

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.91  E-value=1e-22  Score=203.96  Aligned_cols=298  Identities=15%  Similarity=0.094  Sum_probs=195.1

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCC--
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL--  148 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--  148 (398)
                      .++++.+++++    |.+ +.+++++|+++++..++.+++++||+|+++.++|.++...+...|++++.+ +.+.+.+  
T Consensus       208 ~~~ee~la~l~----G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v-~~~~~~~g~  281 (755)
T 2vyc_A          208 GESEKYAARVF----GAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM-VPSRNRYGI  281 (755)
T ss_dssp             HHHHHHHHHHH----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE-CCCBCTTSC
T ss_pred             HHHHHHHHHHh----CCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCCCCcccc
Confidence            44555555555    654 457888999999999999999999999999999999888889999999988 6543322  


Q ss_pred             --CC-----ChHHHHHhhccCCC--------CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC
Q 015890          149 --HP-----DADWLEKTLETKPT--------PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD  210 (398)
Q Consensus       149 --~~-----d~e~l~~~l~~~~~--------~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~  210 (398)
                        .+     |++.|++++++.+.        ++++++++| ||+|.+.+   +++|+++|+++|+++++|++|   +.+.
T Consensus       282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~  357 (755)
T 2vyc_A          282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFN  357 (755)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred             ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccC
Confidence              24     99999999975322        248999998 79999999   999999999999999999999   2332


Q ss_pred             CC-----c-cc--cc-cCCcEEEEcccccccCCCcce-eEEEEccCCcHHH-HHHHHHh-hccCCCCcchHHHHHHHHHh
Q 015890          211 GR-----K-HC--CV-EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGF-ATQLLKV-QDNIPICASIISQHLALYSL  278 (398)
Q Consensus       211 ~~-----~-~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~i~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~l  278 (398)
                      +.     . ..  .. ..++++++.|+||+++  |++ .|++++++....+ ...+... ....+.+++.+..+++..++
T Consensus       358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~  435 (755)
T 2vyc_A          358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAV  435 (755)
T ss_dssp             GGGTTSSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHH
T ss_pred             cccCCcchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence            21     1 11  11 2345678999999874  555 5667666420001 1122221 11223455666666655555


Q ss_pred             cCCc-hHHHHHHHHHHHHHHHHHHHhccCCC---------CccccCC---------------------------------
Q 015890          279 QTGP-EWVTERVKDLVRNREIIREALSPLGE---------GAVKGGE---------------------------------  315 (398)
Q Consensus       279 ~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~~---------------------------------  315 (398)
                      +... ...++..++..++.+.+++.|+++++         +++..+.                                 
T Consensus       436 ~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (755)
T 2vyc_A          436 SMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPG  515 (755)
T ss_dssp             HHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTT
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcc
Confidence            5311 11334445555555555555543322         2222211                                 


Q ss_pred             ----------cc------EEEEeeCCCC---------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          316 ----------GA------IYLWARLPEK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       316 ----------~~------~~~~~~~~~~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                                .+      .-+.+.++..         ..+..++.+.| +++||.+...    ..+.+|+.++. .+.++
T Consensus       516 ~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~~~~~g~t~~~  590 (755)
T 2vyc_A          516 ESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMFLFSMGVTRGK  590 (755)
T ss_dssp             CTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEEECCTTCCTTT
T ss_pred             cccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEEEECCCCCHHH
Confidence                      11      2334444421         12346777766 5799988543    46789999888 89999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 015890          370 CKAAADRLRRGLEELV  385 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~~  385 (398)
                      ++.++++|.+..+.+.
T Consensus       591 ~~~l~~al~~~~~~~~  606 (755)
T 2vyc_A          591 WGTLVNTLCSFKRHYD  606 (755)
T ss_dssp             THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            9999999998877654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=1.2e-22  Score=191.40  Aligned_cols=275  Identities=14%  Similarity=0.091  Sum_probs=186.3

Q ss_pred             cHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHhhhcCCCCC--cEEEecChHHHHHHHHHHhccCCCEEEE
Q 015890           45 PKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM  118 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~----~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~gd~Vl~  118 (398)
                      .+.+++++.+......    ...|..   ....++.+.+.+.+.++.+..  +++++ |+++|+..++.+++++||+|++
T Consensus        37 ~~~vl~A~~~~~~~~~~~~~~~g~~y---~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~  112 (431)
T 3ht4_A           37 QFRVLESFGKHKISDSHFIPTTGYGY---DDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLY  112 (431)
T ss_dssp             HHHHHHHHHHTTCCGGGSCCCCTTCC---SCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEE
T ss_pred             HHHHHHHHHHhchhhhhcCCCCCCCC---ChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEE
Confidence            4678888877532211    111211   123466777777776676533  22344 6789999999999999999999


Q ss_pred             eC-CCCcChhhHH----------HhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015890          119 FA-PYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL  186 (398)
Q Consensus       119 ~~-p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~-~p~nptG~~~~~~~l  186 (398)
                      +. |.|..+...+          +..|++++.+ +.+++ +.+|+++|++.+++++  ++|+++ +|+||+|...+.+++
T Consensus       113 ~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v-~~~~~-~~~d~e~l~~~l~~~t--k~V~i~~sp~np~~~~~~~~~l  188 (431)
T 3ht4_A          113 ITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV-PLTEG-GLVDFEAVAAAIHSNT--KMIGIQRSKGYATRPSFTISQI  188 (431)
T ss_dssp             CSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC-CBCTT-SSBCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHHH
T ss_pred             eCCCCchhHHHHHhhcccccchHHHcCCEEEEe-CCCCC-CCcCHHHHHhhcCCCC--eEEEEECCCCCCCCCcCCHHHH
Confidence            98 9998877544          4578999999 77655 5789999999998754  999999 599999999999999


Q ss_pred             HHHHHHHHH--cCCEEEEeece--eccCCCccccccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          187 KRISDLCKA--AGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       187 ~~i~~l~~~--~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      ++|+++|++  +|+++|+|++|  +.+...+.   ..+.+++++|++|.+|. .+...||++++   +++++.+......
T Consensus       189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~~~~~  262 (431)
T 3ht4_A          189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGK---EQYVEACAYRLTS  262 (431)
T ss_dssp             HHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHHHHSC
T ss_pred             HHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEec---HHHHHHHHHHhcc
Confidence            999999999  99999999999  33322221   12345889999999763 12444999998   8888888764432


Q ss_pred             CCC----CcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC----ccEEEEeeCCCCCCChHH
Q 015890          262 IPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHLDDFE  333 (398)
Q Consensus       262 ~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  333 (398)
                      ...    +.+.....++...+.    ....+.++..+++..+.+.|++++. .+.+..    .+..+.+.++.. ....+
T Consensus       263 ~~~g~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~-~~~~~  336 (431)
T 3ht4_A          263 PGIGAEAGASLYSLQEMYQGFF----LAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDK-DRMIA  336 (431)
T ss_dssp             TTTTTSCSCCCSCSHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCH-HHHHH
T ss_pred             CCcccccCccHHHHHHHHhHhh----hHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCH-HHHHH
Confidence            111    111111222333332    2456667778888888888888776 443322    122556666521 23456


Q ss_pred             HHHHHH
Q 015890          334 VVRWLA  339 (398)
Q Consensus       334 ~~~~ll  339 (398)
                      +++.+.
T Consensus       337 ~~~~l~  342 (431)
T 3ht4_A          337 FCQAIQ  342 (431)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666664

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.89  E-value=4.3e-21  Score=174.97  Aligned_cols=358  Identities=16%  Similarity=0.134  Sum_probs=240.8

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhh
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQE   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~   84 (398)
                      +.+.|...+..+.+.....+.-++|--..|.  .++.|++++-..+.+.-.-+|      +-.....+++....+..+++
T Consensus        35 l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~--~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~l  112 (490)
T 3ou5_A           35 LSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA  112 (490)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHcCceEecCCCc--CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence            3455666777777777777788998877766  479999998887765322223      22344566777777778888


Q ss_pred             cCCCCC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH--------HhcC--cEEEEeccCCCCCCCC
Q 015890           85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHP  150 (398)
Q Consensus        85 ~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~  150 (398)
                      ++.+..    ||-..+ ++.|+..++.++++|||+|+..+..+.++...-        ...|  .+.+.+ ++++++..+
T Consensus       113 F~a~~A~w~VNVQP~S-Gs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y-~vd~~t~~I  190 (490)
T 3ou5_A          113 FDLDPAQWGVNVQPYS-GSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI  190 (490)
T ss_dssp             TTCCTTTEEEECCCSS-HHHHHHHHHHHHCC-CCCEECBC----------------------------CB-CEETTTTEE
T ss_pred             hCCCccccCCCCCcCC-HHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccc-ccCCCCCcc
Confidence            998865    566555 559999999999999999998888776654321        1122  255556 677777789


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s  227 (398)
                      |.|.+++...... ||+|++....+|  ..+|   .+++.++|++.|.+|++|.+|   +...|.-..+..+ ..++++|
T Consensus       191 Dyd~~~~~A~~~k-PklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtT  263 (490)
T 3ou5_A          191 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTT  263 (490)
T ss_dssp             CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEE
T ss_pred             cHHHHHHHHhhcC-CCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEecc
Confidence            9999999988654 799998754444  4567   889999999999999999999   4445554455544 3577899


Q ss_pred             cccccCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLV  293 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~  293 (398)
                      .+|+|  +|.|.|.|.++++..            ++.+++.... .....++....+++.+-++.+ ..+.+..+.+++.
T Consensus       264 THKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv  341 (490)
T 3ou5_A          264 THKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL  341 (490)
T ss_dssp             SSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             ccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence            99998  588999998875210            4556665443 333334444444444444433 3466789999999


Q ss_pred             HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCC-C----CCCCeEEEEecC----
Q 015890          294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA-C----GCRGHLRISFGG----  364 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~----~~~~~iRi~~~~----  364 (398)
                      ++++.|.+.|.+.|...+.+......+++++.....+..+... +|++.||.+.--.. +    ..+..|||+...    
T Consensus       342 ~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~-~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtR  420 (490)
T 3ou5_A          342 KNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAER-VLELVSITANKNTCPGDRSAITPGGLRLGAPALTSR  420 (490)
T ss_dssp             HHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHH-HHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHT
T ss_pred             HHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHH-HHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhC
Confidence            9999999999998885555566567788888654445555544 56799999853221 1    125689999432    


Q ss_pred             -CCHHHHHHHHHHHHHHHH
Q 015890          365 -LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~  382 (398)
                       ..++|+.+..+.|.+++.
T Consensus       421 G~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          421 QFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             TCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH
Confidence             578899999999988775

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.85  E-value=1.9e-21  Score=196.17  Aligned_cols=340  Identities=11%  Similarity=0.020  Sum_probs=214.1

Q ss_pred             CeEEcCCc--cCCCC-C-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHHHH
Q 015890           31 NAVSLAQG--VVYWQ-P-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI  105 (398)
Q Consensus        31 ~~~~l~~g--~~~~~-~-~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~~~  105 (398)
                      .|+|+..|  .+.++ . +|++.+|+.+++.+..  .+.......+....+++.|.+..+.. .+.+++++||++|++.+
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~--h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~A  458 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFG--HVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIA  458 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHS--SCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcc--cccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHH
Confidence            68888876  34555 3 7999999999886521  11111112344456777776655533 46899999999999999


Q ss_pred             HHHhc-----cC-----------C-CEEEEeCCCCcChhhHH-HhcCc---------------EE-------------EE
Q 015890          106 VLTLC-----DA-----------G-DSVVMFAPYYFNSYMSF-QMTGV---------------TH-------------IL  139 (398)
Q Consensus       106 ~~~l~-----~~-----------g-d~Vl~~~p~~~~~~~~~-~~~g~---------------~~-------------~~  139 (398)
                      ++...     ..           + .+|+....+|++....+ ...|.               .+             ..
T Consensus       459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  538 (831)
T 4a0g_A          459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN  538 (831)
T ss_dssp             HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred             HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence            98862     11           2 37999999998755333 22221               00             01


Q ss_pred             eccCCCC------C--CCCC------------------hHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-CCHHH
Q 015890          140 VGPCSSK------T--LHPD------------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-IPERL  185 (398)
Q Consensus       140 ~~~~~~~------~--~~~d------------------~e~l~~~l~~------~~~~~~v~i~~p-~nptG~~-~~~~~  185 (398)
                      + +.+..      +  ..-+                  .+.|++.++.      ...+++|+++.. ++..|.. +|+++
T Consensus       539 ~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~  617 (831)
T 4a0g_A          539 I-SLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF  617 (831)
T ss_dssp             E-ECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred             e-cCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence            1 11100      0  0001                  2567777752      233678888864 7888875 58889


Q ss_pred             HHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc-ceeEEEEccCCcHHHHHHHHHh----
Q 015890          186 LKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV----  258 (398)
Q Consensus       186 l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~l~~~----  258 (398)
                      +++|.++|++||+++|+||++  |+..|........+....+.+++|.++ +| +++|+++++   +++++.+...    
T Consensus       618 L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~-gG~~Plgav~~~---~~i~~~~~~~~~~~  693 (831)
T 4a0g_A          618 QRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLT-GGMVPLAVTLAT---DAVFDSFSGDSKLK  693 (831)
T ss_dssp             HHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGG-TTSSCCEEEEEC---HHHHHTTCSSCGGG
T ss_pred             HHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccc-cCccCcEEEEEC---HHHHHHHhcccccc
Confidence            999999999999999999999  666665443221111111337899997 57 799999999   7888776432    


Q ss_pred             --hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHH----HHHHHHHhccCCCCccccCCccEEEEeeCCCCC--
Q 015890          259 --QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN----REIIREALSPLGEGAVKGGEGAIYLWARLPEKH--  328 (398)
Q Consensus       259 --~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--  328 (398)
                        ....+++.++.+++++.+.|+..  ++..++..+...+.    .+.+.+.+++.+.+..+.+. |.++.+.+....  
T Consensus       694 ~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~  772 (831)
T 4a0g_A          694 ALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKADASN  772 (831)
T ss_dssp             SCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC-----
T ss_pred             cceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccc
Confidence              23467788999999999888741  11111111111111    22344555556654445555 556666664221  


Q ss_pred             -----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          329 -----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       329 -----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                           .....+...++ ++||+++|+     .+.||+++.. .+++++++++++|.++++++
T Consensus       773 ~~~~~~~a~~~~~~l~-e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          773 SGYASLYAKSLLIMLR-EDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             ----CHHHHHHHHHHH-HTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred             cccchHHHHHHHHHHH-HCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence                 12345666665 899999985     4789999666 79999999999999988764

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.85  E-value=7.1e-20  Score=180.32  Aligned_cols=299  Identities=13%  Similarity=0.079  Sum_probs=190.5

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS  145 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  145 (398)
                      +..-..++++.+++++    |. ...+++++|++.|+..++.+++++||+|+++.++|.++...+...|++++++ +.+.
T Consensus       193 ~~g~i~eaE~~lA~~f----Ga-~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v-~~~~  266 (715)
T 3n75_A          193 HSGPHKEAEQYIARVF----NA-DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYF-RPTR  266 (715)
T ss_dssp             TBTHHHHHHHHHHHHH----TC-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEE-CCCB
T ss_pred             CcHHHHHHHHHHHHHh----CC-CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-eccc
Confidence            4444567777777777    44 2346677887899999999999999999999999999999999999999998 5443


Q ss_pred             CCCC----C-----ChHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC
Q 015890          146 KTLH----P-----DADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD  210 (398)
Q Consensus       146 ~~~~----~-----d~e~l~~~l~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~  210 (398)
                      +.+.    +     |++.|++++++.+.   ++++++++| |++|.+++   +++|.++|+++  .+++||+|   +.+.
T Consensus       267 ~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~~f~  340 (715)
T 3n75_A          267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYTNFS  340 (715)
T ss_dssp             CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTGGGS
T ss_pred             cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEccccccccccC
Confidence            3333    3     89999999985432   348999999 99999999   88888888766  37999999   3333


Q ss_pred             CCc--ccccc----CCcE-EEEcccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhc-cCCCCcchHHHHHHHHHhcCC
Q 015890          211 GRK--HCCVE----GDHV-VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTG  281 (398)
Q Consensus       211 ~~~--~~~~~----~~~~-i~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~  281 (398)
                      +..  .....    .+.+ +++.|+||+++  |+ ..|++.+++..  ..+.+..... ..+.+++.+..+++..+++..
T Consensus       341 ~~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~  416 (715)
T 3n75_A          341 PIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--NEETFNEAYMMHTTTSPHYGIVASTETAAAMM  416 (715)
T ss_dssp             GGGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred             CccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Confidence            211  12221    2333 55899999985  44 35788777531  1222332222 224556666666666666432


Q ss_pred             c-hHHHHHHHHHHHHHHHHHHHhccCCC------CccccCC------------------------c-----cEEEEeeCC
Q 015890          282 P-EWVTERVKDLVRNREIIREALSPLGE------GAVKGGE------------------------G-----AIYLWARLP  325 (398)
Q Consensus       282 ~-~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~~------------------------~-----~~~~~~~~~  325 (398)
                      . ....+..++..++.+++++.|++++.      +++..++                        +     ..-+.+..+
T Consensus       417 ~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~  496 (715)
T 3n75_A          417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP  496 (715)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECS
T ss_pred             HhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcC
Confidence            2 12344555555666666655543321      1111110                        0     111334443


Q ss_pred             CC---------CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          326 EK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       326 ~~---------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ..         ..++.++.+.| +++||.+.-.    ...+|-+-++- .+++++++++++|.+.-+.+.
T Consensus       497 ~~~~~G~~~~~Gi~g~~~~~~L-~~~~I~~E~~----d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~~  561 (715)
T 3n75_A          497 GMEKDGTMSDFGIPASIVAKYL-DEHGIVVEKT----GPYNLLFLFSIGIDKTKALSLLRALTDFKRAFD  561 (715)
T ss_dssp             CBCTTSCBCSSCCCHHHHHHHH-HHTTCCCSEE----ETTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCCCcHHHHHHHH-HHCCCEEEec----CCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            21         23455666666 6889988553    24455444443 588889999988887766544

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.81  E-value=8.6e-18  Score=154.05  Aligned_cols=300  Identities=13%  Similarity=0.046  Sum_probs=190.9

Q ss_pred             HHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccC----CCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCCh
Q 015890           79 KKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA  152 (398)
Q Consensus        79 ~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~  152 (398)
                      +|++.. |++. ...++++|+|.++.+++.+.+++    +|+||++..+|.+....+...|+++++++|. +++...+|+
T Consensus       124 d~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~  202 (501)
T 3hl2_A          124 DIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDL  202 (501)
T ss_dssp             HHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECH
T ss_pred             HHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCH
Confidence            444444 7764 56999999998888888887763    4999999999999999999999999998442 233467899


Q ss_pred             HHHHHhhccCC-CCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccC-CCccccccCC-cEEEE
Q 015890          153 DWLEKTLETKP-TPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYD-GRKHCCVEGD-HVVNL  225 (398)
Q Consensus       153 e~l~~~l~~~~-~~~~v~i~-~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~-~~~~~~~~~~-~~i~~  225 (398)
                      +.++++|++.+ ...++++. .+.|..+.+.+   |++|+++|++||++++||+||   +.+. ..+......+ .++++
T Consensus       203 e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vV  279 (501)
T 3hl2_A          203 KAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFV  279 (501)
T ss_dssp             HHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred             HHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEE
Confidence            99999998532 23444444 34454445567   999999999999999999999   3221 1111222223 55788


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      .|.+|.+-++ +..+.+..++  +++++.+........  ..+++.......+..+.+.+++..++..++.+++++.|++
T Consensus       280 qS~HK~llvp-IGG~ii~~~d--~e~l~~~~~~yPGr~--S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~  354 (501)
T 3hl2_A          280 QSLDKNFMVP-VGGAIIAGFN--DSFIQEISKMYPGRA--SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK  354 (501)
T ss_dssp             EEHHHHHCCC-SSCEEEEESC--HHHHHHHHHTSCSCB--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccceee-cCceEEEeCC--HHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999998433 3334554565  677777654432212  2233333333344334566677777777777777777765


Q ss_pred             ----CCCCcccc-CCccEEEEeeCCCCCC---C-hHHHHHHHHHhcCe---EE-ecCC----------CCCC------CC
Q 015890          306 ----LGEGAVKG-GEGAIYLWARLPEKHL---D-DFEVVRWLAHRHGV---VV-IPGG----------ACGC------RG  356 (398)
Q Consensus       306 ----~~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~ll~~~gi---~v-~~g~----------~~~~------~~  356 (398)
                          .+. ++.. +.+..-+.+.+.....   . ...+-..|- .++|   .| .++.          .|+.      ..
T Consensus       355 la~~~ge-~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf-~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~  432 (501)
T 3hl2_A          355 LSEAYNE-RLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF-TRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA  432 (501)
T ss_dssp             HHHTTTC-CBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH-HTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSC
T ss_pred             HHHhcCh-hhcCCCCCceeEEEecccccccccccHHHHHHHHH-hcCCCcceeecCCCceEECCeeecCcccCCCCCCch
Confidence                343 4433 3344555556543211   1 223333343 4443   33 3333          2322      35


Q ss_pred             eEEEEecC-CCHHHHHHHHHHHHHHHHHHhcccc
Q 015890          357 HLRISFGG-LVEDDCKAAADRLRRGLEELVKDGM  389 (398)
Q Consensus       357 ~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~  389 (398)
                      ++-++.+- .+.+|++.++++|.+++.++.++..
T Consensus       433 yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~  466 (501)
T 3hl2_A          433 YLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERS  466 (501)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            77776555 7999999999999999999876433

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.76  E-value=1.9e-16  Score=147.21  Aligned_cols=310  Identities=14%  Similarity=0.041  Sum_probs=190.9

Q ss_pred             CCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhccC----CCEEEEeCCCCcChhhHHHhcCcEEEEecc
Q 015890           68 EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGP  142 (398)
Q Consensus        68 ~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~~----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~  142 (398)
                      ++...+.+.+..++.+..|++.. ..++++|+|.++.+++.+.+++    ++.|+++..+|.+...++...|+.++.+.+
T Consensus        94 ~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~  173 (450)
T 3bc8_A           94 SLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN  173 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence            33556777888888887788643 4688899985555555555443    789999999999999999999999888833


Q ss_pred             CC-CCCCCCChHHHHHhhccCC-CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEeecee---ccCC-Cccc
Q 015890          143 CS-SKTLHPDADWLEKTLETKP-TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF---MYDG-RKHC  215 (398)
Q Consensus       143 ~~-~~~~~~d~e~l~~~l~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~---~~~~-~~~~  215 (398)
                      .. ++.+.+|++.|+++|++.+ ...++++.+| ++.+|.+-+   +++|+++|++||++++||++|.   .+.. .+..
T Consensus       174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~  250 (450)
T 3bc8_A          174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ  250 (450)
T ss_dssp             EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred             eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHH
Confidence            21 2346789999999997532 1245555544 455667888   9999999999999999999992   2211 1111


Q ss_pred             ccc-CCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHH
Q 015890          216 CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR  294 (398)
Q Consensus       216 ~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  294 (398)
                      ... ...+.++.|.+|++. .....+++..++  ++.++.+.........+  +++.......+..+.+.+.+..++..+
T Consensus       251 a~~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd--~~~~~~~~~~~~g~~s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~  325 (450)
T 3bc8_A          251 GARVGRIDAFVQSLDKNFM-VPVGGAIIAGFN--EPFIQDISKMYPGRASA--SPSLDVLITLLSLGCSGYRKLLKERKE  325 (450)
T ss_dssp             HHHHSCCCEEEEEHHHHHS-CCSSCEEEEESC--HHHHHHHHHHSCSCBCS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcccCCCEEEECCccCCC-chhccEEEEecC--HHHHHHHHHHhhcCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111 134567889999996 444556666665  67766665433211222  333333333333344556666666666


Q ss_pred             HHHHHHHHhccCC---CCccccCC-ccEEEEeeCCC---C-CCChHHHHHHHHHhcC---eEEec---------------
Q 015890          295 NREIIREALSPLG---EGAVKGGE-GAIYLWARLPE---K-HLDDFEVVRWLAHRHG---VVVIP---------------  348 (398)
Q Consensus       295 ~~~~l~~~l~~~~---~~~~~~~~-~~~~~~~~~~~---~-~~~~~~~~~~ll~~~g---i~v~~---------------  348 (398)
                      +.+++++.+++++   +.++...+ .+.-..+.++.   . ..+...+.-.+ ...|   ..+.+               
T Consensus       326 ~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~~~~l~~~  404 (450)
T 3bc8_A          326 MFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSGHTFRGF  404 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETTEEEETT
T ss_pred             HHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchhHHHHHHc
Confidence            6777777766544   43554422 11112222221   1 11333444434 2344   33321               


Q ss_pred             CCC--CCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          349 GGA--CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       349 g~~--~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      +..  +....+|=+.++. .+++++++++++|.+.++++.+
T Consensus       405 gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~  445 (450)
T 3bc8_A          405 MSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK  445 (450)
T ss_dssp             TTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            111  1234566665555 7999999999999999877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	398
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	3e-68
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	1e-62
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	1e-59
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	1e-52
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	2e-40
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	2e-36
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	1e-34
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	9e-34
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	5e-32
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	4e-31
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	2e-30
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	6e-30
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	9e-30
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	1e-29
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-29
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-29
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	1e-28
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	2e-28
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	1e-26
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	5e-26
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	6e-25
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	2e-23
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	4e-23
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-21
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	4e-17
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	6e-13
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	3e-10
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	4e-09
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	2e-08
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	1e-07
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	4e-07
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	6e-07
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	1e-06
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-06
d1h0ca_	388	c.67.1.3 (A:) Alanine-glyoxylate aminotransferase	2e-06
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	3e-05
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	0.003
d1y4ia1	397	c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Ci	0.004

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  218 bits (556), Expect = 3e-68
 Identities = 88/394 (22%), Positives = 171/394 (43%), Gaps = 21/394 (5%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI 61
           KLA R         + I  + + +     +  S + G   +  PK  +E  K  + +   
Sbjct: 2   KLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQGK 60

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           ++YG   G P LR+A+ +KL ++N L     +++VT G  Q+  N++L + + GD V++ 
Sbjct: 61  TRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIP 120

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           AP++ +     ++   T +++            + + + +   P  KL+    P NP+G 
Sbjct: 121 APFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTGM 178

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG------DHVVNLFSFSKA 231
                 ++ I+ +   AG W++ D  Y   +YD  +H  +        +  V    F+K 
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238

Query: 232 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 291
           Y M GWRVG++A P  +        K+Q +        +Q+ A+ + +   + V E +  
Sbjct: 239 YAMTGWRVGFLAGPVPL---VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAA 295

Query: 292 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA 351
               R  + +AL+ +        +GA Y++  + +      +    L  +H V  +PG A
Sbjct: 296 FAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAA 355

Query: 352 CGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 385
            G    +R+S+     D  K   +RL + L  ++
Sbjct: 356 FGADDCIRLSY-ATDLDTIKRGMERLEKFLHGIL 388

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  203 bits (518), Expect = 1e-62
 Identities = 96/384 (25%), Positives = 170/384 (44%), Gaps = 16/384 (4%)

Query: 6   KLAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI 61
            L++R    +    + +  +  EL R   + V+L  G   +  P+   E  +  +     
Sbjct: 3   GLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-K 61

Query: 62  SKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
           +KY    G+PELR+AL +K  +EN   +     +VT G +QA  N+   + D GD V++ 
Sbjct: 62  TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVL 121

Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179
           +PY+ +     +  G   + V     +   PD + + + +   P  K + V +P NP+G 
Sbjct: 122 SPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGA 179

Query: 180 YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMM 235
             P+ +L+ ++ L      +LV D  Y   +Y+G          +H + +   +KA+ M 
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239

Query: 236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 295
           GWR+GY   P EV      + +     P   +  +   AL + +    +V    +   R 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRR 299

Query: 296 REIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 355
           R+++ E L+ LG  AV+   GA Y+         D+      L    GV V+PG      
Sbjct: 300 RDLLLEGLTALGLKAVR-PSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAF 357

Query: 356 GHLRISFGGLVEDDCKAAADRLRR 379
           GH+R+S+    E++ + A +R  R
Sbjct: 358 GHVRLSY-ATSEENLRKALERFAR 380

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  196 bits (498), Expect = 1e-59
 Identities = 92/390 (23%), Positives = 174/390 (44%), Gaps = 18/390 (4%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA 66
           L+ R        + ++ ++  G K+ +SL  G   +  P+   E  KE + D  ++ YG 
Sbjct: 2   LSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGP 60

Query: 67  DEGLPELRDALVKKLNQENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           + GL ELR+A+ +KL ++N +       +MV  GANQAF+  +      G+ V++  P +
Sbjct: 61  NIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAF 120

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
            +   +  + G   + V          + D L+K +      + + + +P NP+G  + +
Sbjct: 121 VSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV--TDKTRALIINSPCNPTGAVLTK 178

Query: 184 RLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMG 236
           + L+ I+D        ++ D  Y  +                 +  + +  FSK + M G
Sbjct: 179 KDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTG 238

Query: 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296
           WR+G++A PS +     +        P+     +   AL   +   + V E  K+  R R
Sbjct: 239 WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKD-ERSWKAVEEMRKEYDRRR 297

Query: 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-- 354
           +++ + L+ +G   VK  +GA Y++ R+ +  L   +    +     V V+PG A G   
Sbjct: 298 KLVWKRLNEMGLPTVKP-KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAG 356

Query: 355 RGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
            G++RIS+     +  + A DR+ R L+E 
Sbjct: 357 EGYVRISY-ATAYEKLEEAMDRMERVLKER 385

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  178 bits (451), Expect = 1e-52
 Identities = 91/396 (22%), Positives = 166/396 (41%), Gaps = 22/396 (5%)

Query: 6   KLAKRALETE---MPIMVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
           + +KRAL  E     +++  +EL +     + L  G      +QPP+   E   + + + 
Sbjct: 3   RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG 62

Query: 60  SISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
             + YG  EGLPELR A+V++  ++N +      V VTA   +A   I   L D GD ++
Sbjct: 63  -HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 121

Query: 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177
           +  P Y       +  G   +       +   PD D + K +  +   K ++V+NP NP+
Sbjct: 122 VPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT--KAIAVINPNNPT 179

Query: 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCC-----VEGDHVVNLFSFSKAY 232
           G    ++ L+ I ++       ++ D  Y +              +   V+ +   SK Y
Sbjct: 180 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY 239

Query: 233 GMMGWRV--GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVK 290
              GWR+   Y   P        + +     I +C +  +Q  A+  L    +++ E +K
Sbjct: 240 FATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMK 299

Query: 291 DLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPG 349
            L   R+ I + L+ +   +    +GA Y++ ++      +D E V  + H   V+ + G
Sbjct: 300 KLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHG 359

Query: 350 GACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383
              G    GH R  F     +  + A DR  + ++E
Sbjct: 360 SGFGEYGAGHFRAVF-LPPIEILEEAMDRFEKFMKE 394

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  145 bits (366), Expect = 2e-40
 Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 26/388 (6%)

Query: 7   LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
           +++R  E      M +  + + L++  ++ ++L  G   +  P+  +E+    +      
Sbjct: 1   VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EV 59

Query: 63  KYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           KY    G+ ELR+ + K++ +     +    V+VT GA QA  N  + L D GD V++F+
Sbjct: 60  KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P + +      + G T  +V    SK   P  + +E         K V + +P NP+G  
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG--LLVGKTKAVLINSPNNPTGVV 177

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV------EGDHVVNLFSFSKAYGM 234
                L+ +  L K    +++ D  Y                   D +V +  FSK++ M
Sbjct: 178 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSM 237

Query: 235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 294
            GWRVGY+    +V    ++            S I+      +L+      +  V+    
Sbjct: 238 TGWRVGYLISSEKVATAVSK------IQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE 291

Query: 295 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC 354
            +  + E L  +G   V+  EGA YL+ ++     DD +    L     V ++PG A   
Sbjct: 292 RKNFVVERLKKMGVKFVEP-EGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFLK 347

Query: 355 RGHLRISFGGLVEDDCKAAADRLRRGLE 382
            G +R+SF     +    A DR+   L 
Sbjct: 348 PGFVRLSF-ATSIERLTEALDRIEDFLN 374

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  135 bits (341), Expect = 2e-36
 Identities = 50/346 (14%), Positives = 89/346 (25%), Gaps = 57/346 (16%)

Query: 71  PELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTL--------CDAGDSVVMFA 120
            EL   + +              ++   G  Q    +V++L              VV  A
Sbjct: 103 FELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHA 162

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P+Y       +       +           +A          P   +  V +P NP G  
Sbjct: 163 PFYPVFREQTKYFDKKGYVW--------AGNAANYVNVS--NPEQYIEMVTSPNNPEGLL 212

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 240
               +           G   + D  Y+ +        + D  + LF+ SK  G  G R G
Sbjct: 213 RHAVIK----------GCKSIYDMVYY-WPHYTPIKYKADEDILLFTMSKFTGHSGSRFG 261

Query: 241 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-----------EWVTERV 289
           +     E       LL             +Q  +L  L+              +  T   
Sbjct: 262 WALIKDES--VYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGF 319

Query: 290 KDLVRNREIIREALSPLGEGAVK---GGEGAIYLWARLP--------EKHLDDFEVVRWL 338
           K L      I   L      + +     E   Y     P        +   ++ +     
Sbjct: 320 KKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQT 379

Query: 339 AHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE 383
                +    G        ++R+S     +DD       L+  ++ 
Sbjct: 380 FQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVKA 424

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score =  130 bits (328), Expect = 1e-34
 Identities = 58/355 (16%), Positives = 115/355 (32%), Gaps = 34/355 (9%)

Query: 61  ISKYGADEGLPELRDALVKKLNQ----ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116
           ++ +    GLP  + A+V  + +    +     + +++TAGA  A    +  L D G++V
Sbjct: 77  LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAV 136

Query: 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNP 173
           ++  PYY       +      I+   C+S     +   A         K   ++  V+  
Sbjct: 137 LIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 196

Query: 174 ----GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKH--------------C 215
                  +     E  L       K          +   +                    
Sbjct: 197 NPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDEN 256

Query: 216 CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 275
                 V  ++S SK  G+ G+RVG I    ++             +    +       L
Sbjct: 257 SEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVA-AATKMSSFGLVSSQTQHLLSAML 315

Query: 276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----KHLD 330
              +    ++ E  K L + ++ +   L   G   +  G   ++ W  +           
Sbjct: 316 SDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN-GNAGLFCWVDMRHLLRSNTFEA 374

Query: 331 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 383
           + E+ + + +   + + PG +C C   G  R+ F  L E     A  RL+  + E
Sbjct: 375 EMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 429

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  127 bits (318), Expect = 9e-34
 Identities = 87/382 (22%), Positives = 142/382 (37%), Gaps = 25/382 (6%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
           +L  R    +  I  ++  L +    AV+L QG     PP   +E V+  +      +Y 
Sbjct: 2   RLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGRQD--QYA 58

Query: 66  ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
              GLP LR+AL ++      +   SV+VT+GA +A   ++ +L   GD VV+  P++  
Sbjct: 59  PPAGLPALREALAEE----FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDV 114

Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
                 + G     +            D         P  + + +  P NP+G    ER 
Sbjct: 115 YLPDAFLAG-AKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERE 173

Query: 186 LKRISDLCKAAGSWLVVD----NTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 241
           L+ I+ L +A   +L+ D      Y+    R+      +    + S  K     G+RVG+
Sbjct: 174 LEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGW 233

Query: 242 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 301
           I  P E       + +                AL   +    +   R     R R+++  
Sbjct: 234 IVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREG-YRRRRDLLAG 292

Query: 302 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGH 357
            L  +G       EG  +L A LP    D F     L     V +IP  A       +  
Sbjct: 293 GLRAMGLRVYV-PEGTYFLMAELP--GWDAFR----LVEEARVALIPASAFYLEDPPKDL 345

Query: 358 LRISFGGLVEDDCKAAADRLRR 379
            R +F    E++   A +RL R
Sbjct: 346 FRFAFCK-TEEELHLALERLGR 366

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score =  123 bits (309), Expect = 5e-32
 Identities = 58/356 (16%), Positives = 111/356 (31%), Gaps = 32/356 (8%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGD 114
            +I+ +    GLPE R A+ K + +      +     V++  GA  A   I+  L D GD
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD 133

Query: 115 SVVMFAPYYFNSYMSFQMTG---VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171
           + ++ +PYY       +      +  I     ++  +   A         K   K+  ++
Sbjct: 134 AFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHC---------------- 215
                +            S L       + +                             
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253

Query: 216 CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLAL 275
               D V  ++S SK  G+ G+RVG I Y    +            +    +       L
Sbjct: 254 YCNKDLVHIVYSLSKDMGLPGFRVGII-YSFNDDVVNCARKMSSFGLVSTQTQYFLAAML 312

Query: 276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----KHLD 330
              +    ++ E    L +  +     L  +G   +K     ++ W  L           
Sbjct: 313 SDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLK-NNAGLFCWMDLRPLLRESTFDS 371

Query: 331 DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           +  + R + +   + V PG +  C+  G  R+ F  + +     A  R+RR +   
Sbjct: 372 EMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  120 bits (302), Expect = 4e-31
 Identities = 59/395 (14%), Positives = 113/395 (28%), Gaps = 55/395 (13%)

Query: 31  NAVSLAQGVVY---WQPPKM-AMEKVKELVW--DPSISKYGADEGLPELRDALVKKLNQE 84
             V+L  G       QP  +  + KV++ +        +Y    GL E R    +    +
Sbjct: 31  RKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGD 90

Query: 85  NKLYK-----------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           +                         +          +    V + +P + N    F   
Sbjct: 91  DSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTA 150

Query: 134 GVTHILVGPC-SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
           G   I       ++    D       LE        V      NP+GT       K+I+ 
Sbjct: 151 GFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAS 210

Query: 192 LCKAAGSWLVVDNTY--FMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYI 242
           + K    +   D+ Y  F     +           EG  +    SFSK +G+   RVG +
Sbjct: 211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNL 270

Query: 243 AYPS----EVEGFATQLLKVQDNIPICASIISQHLALY------SLQTGPEWVTERVKDL 292
              +     +    +Q+ K+              +                 V      +
Sbjct: 271 TVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRI 330

Query: 293 VRNREIIREALSPLGEGAVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 349
           +  R  +R  L  L           +  ++ +  L        + V +L ++  + ++P 
Sbjct: 331 LSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP------KQVEYLINQKHIYLLPS 384

Query: 350 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           G        RI+  GL   +    A  +   + ++
Sbjct: 385 G--------RINMCGLTTKNLDYVATSIHEAVTKI 411

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score =  118 bits (296), Expect = 2e-30
 Identities = 74/386 (19%), Positives = 143/386 (37%), Gaps = 24/386 (6%)

Query: 22  IQELVRGA--KNAVSLAQGV--VYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRD 75
           ++EL++     + +SLA G+      P +   +   E++ +      +YG  +G   LR 
Sbjct: 19  VRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRL 78

Query: 76  ALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT 133
           AL + + +     + K  +M  AG+ QA   I     + GD +V+ AP Y  +  +F+  
Sbjct: 79  ALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYY 138

Query: 134 G--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
                 I +     +    +    E   + K    + +V    NP+G  +     K++ +
Sbjct: 139 DPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLE 198

Query: 192 LCKAAGSWLVVDNTY--FMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 246
           L       +V D  Y    Y G         +    V            G+R+G++A   
Sbjct: 199 LANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHP 258

Query: 247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306
            +        +  D                      E + + ++     R+ + EAL   
Sbjct: 259 HLIRKMEIAKQSIDLCTNTFGQAIAW-KYVENGYLDEHIPKIIEFYKPRRDAMLEALEEY 317

Query: 307 GEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRI 360
               V+    EG +++   LPE    D +++   A   GV  +PG A       +  +R+
Sbjct: 318 MPEGVEWTKPEGGMFVRVTLPEG--IDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRL 375

Query: 361 SFGGLVEDDCKAAADRLRRGLEELVK 386
           +F  + E+  +    RL   ++E +K
Sbjct: 376 NFTYVPEETIREGVRRLAETIKEEMK 401

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (292), Expect = 6e-30
 Identities = 51/383 (13%), Positives = 111/383 (28%), Gaps = 49/383 (12%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             ++L  GV      + P +    +  + L+ + +   Y   +G+PE      + L  + 
Sbjct: 27  GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKG 86

Query: 86  KLYKS------SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHIL 139
               +      +               L    +   V +  P + N    F   G+    
Sbjct: 87  SALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVRE 146

Query: 140 VGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198
                ++         +    E +    ++      NP+G        + ++ L    G 
Sbjct: 147 YAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGW 206

Query: 199 WLVVDNTY--FMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS---- 246
             + D  Y  F     +              ++   S+SK +G+   RVG     +    
Sbjct: 207 LPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSE 266

Query: 247 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIR 300
            V+   +Q+                 +    L          + +T+  + + R R++  
Sbjct: 267 TVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFV 326

Query: 301 EALSPLGEGA----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 356
             L   G       +    G  + ++ L +      E V  L    GV  +  G      
Sbjct: 327 NTLQEKGANRDFSFIIKQNGM-FSFSGLTK------EQVLRLREEFGVYAVASG------ 373

Query: 357 HLRISFGGLVEDDCKAAADRLRR 379
             R++  G+  D+     + +  
Sbjct: 374 --RVNVAGMTPDNMAPLCEAIVA 394

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  116 bits (291), Expect = 9e-30
 Identities = 56/384 (14%), Positives = 105/384 (27%), Gaps = 49/384 (12%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             ++L  G       +P  +    +    +       +Y    GL +   A  +    EN
Sbjct: 29  KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGEN 88

Query: 86  KLYKSS-------VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI 138
                S        +   G+ +   N +         V +  P + N    F+  G+   
Sbjct: 89  SEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQ 148

Query: 139 LVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                  KT   D     + + +      ++      NP+G    +   K ++ + K   
Sbjct: 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRN 208

Query: 198 SWLVVDNTY--FMYDGRKH-------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
                D  Y  F                 +G  VV   S++K  G+ G R G        
Sbjct: 209 LLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRD 268

Query: 249 EG----FATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREI 298
                   +QL  +   +     +    +A   L T          V      ++  R  
Sbjct: 269 AEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQ 328

Query: 299 IREALSPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR 355
           +   L   G          +  ++ +  L        E V  L     + +   G     
Sbjct: 329 LVSNLKKEGSSHNWQHITDQIGMFCFTGLKP------EQVERLTKEFSIYMTKDG----- 377

Query: 356 GHLRISFGGLVEDDCKAAADRLRR 379
              RIS  G+   +    A  + +
Sbjct: 378 ---RISVAGVASSNVGYLAHAIHQ 398

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 1e-29
 Identities = 77/418 (18%), Positives = 144/418 (34%), Gaps = 43/418 (10%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYG 65
            A+R    +    V+  +L     + V+L QG   + PP  A+E  +  V  D  +++Y 
Sbjct: 3   QARRLDGIDYNPWVEFVKLASE-HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYT 61

Query: 66  ADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY 122
              G P L   L     +          +V+VT G   A       L D GD V++  P+
Sbjct: 62  KTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPF 121

Query: 123 YFNSYMSFQMTGVT----HILVGPCSSKTLHPDADW----LEKTLETKPTPKLVSVVNPG 174
           +        M G       +  GP  +  L   ++W    +E   +     K + +  P 
Sbjct: 122 FDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPN 181

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV-----EGDHVVNLFS 227
           NP G       L+ ++ LC+      + D  Y   +YDG +H  +       +  + + S
Sbjct: 182 NPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGS 241

Query: 228 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 287
             K +   GW+VG++  P  +      + +         S  +   +    Q      + 
Sbjct: 242 AGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS 301

Query: 288 RVKDLVRNREIIREALSPLGEGA---VKGGEGAIYLWARLPE------------KHLDDF 332
                 +  +  R+ +    +         +G+ +L   + +                D 
Sbjct: 302 YFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDR 361

Query: 333 EVVRWLAHRHGVVVIPGGACG-------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 383
             V+W+    G+V IP               ++R  F    E   +A  ++LR+   E
Sbjct: 362 RFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCF-VKDEATLQAMDEKLRKWKVE 418

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  115 bits (289), Expect = 2e-29
 Identities = 60/391 (15%), Positives = 106/391 (27%), Gaps = 56/391 (14%)

Query: 31  NAVSLAQGVVY-WQPPKMAMEKVKE----LVWDPSISK-YGADEGLPELRDALVKKLNQE 84
             V L  G           +  VK     +  D S +  Y    GLP L     K +   
Sbjct: 30  TKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGT 89

Query: 85  -NKLYKSSVMVT-----AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-TH 137
            +   +   +++                 +       V +  P + N    F+  G+ T 
Sbjct: 90  QSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTA 149

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
                 +         +L    +       V      NP+G         +I D   +  
Sbjct: 150 TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKN 209

Query: 198 SWLVVDNTY--FMYDGRKHCCV----------EGDHVVNLFSFSKAYGMMGWRVGYIAYP 245
              + D  Y  F                        V    SF+K  GM G RVG     
Sbjct: 210 HIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA 269

Query: 246 SEV--------EGFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKD 291
                          +QL K+  +           +    L+T        + +      
Sbjct: 270 LTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSR 329

Query: 292 LVRNREIIREALSPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 348
           + + R  +R+ L  LG          +  ++ +  L        ++V+ L   H V ++ 
Sbjct: 330 ITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP------QMVKRLEETHAVYLVA 383

Query: 349 GGACGCRGHLRISFGGLVEDDCKAAADRLRR 379
            G        R S  GL + + +  A  +  
Sbjct: 384 SG--------RASIAGLNQGNVEYVAKAIDE 406

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  115 bits (288), Expect = 3e-29
 Identities = 61/385 (15%), Positives = 108/385 (28%), Gaps = 52/385 (13%)

Query: 31  NAVSLAQGVVY---WQPPKMAMEKVKE----LVWDPSISK-YGADEGLPELRDALVKKLN 82
           + V+L+ G+ Y      P   ++ V E    L   P  +  Y   EGL   R A+   L 
Sbjct: 27  DKVNLSIGLYYNEDGIIP--QLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF 84

Query: 83  QEN--KLYKSSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVT 136
             +   L +  V        +    V             V +  P + N    F   G  
Sbjct: 85  GADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFE 144

Query: 137 HILV-GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
                    +       D L           ++      NP+G  +       + ++ KA
Sbjct: 145 VSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKA 204

Query: 196 AGSWLVVDNTY--FMYDGRKHC------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
                 +D  Y  F     +           G   +   SFSK + + G RVG ++   E
Sbjct: 205 RELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCE 264

Query: 248 VEGFATQLLKVQDNIP---ICASIISQHLALYSLQTGPEWVTE-------RVKDLVRNRE 297
               A ++L            +        + ++                    ++  R+
Sbjct: 265 DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQ 324

Query: 298 IIREALSPLG-EGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC 354
            + + LS    E        +  ++ +  L          V  L    GV +I  G    
Sbjct: 325 ELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA------AQVDRLREEFGVYLIASG---- 374

Query: 355 RGHLRISFGGLVEDDCKAAADRLRR 379
               R+   GL   + +  A     
Sbjct: 375 ----RMCVAGLNTANVQRVAKAFAA 395

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score =  113 bits (283), Expect = 1e-28
 Identities = 65/413 (15%), Positives = 126/413 (30%), Gaps = 41/413 (9%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV--WDPSISK 63
            L KR   +   + V+  +L       ++L QG   +  PK A+  +       DP  ++
Sbjct: 3   DLPKRYQGSTKSVWVEYIQLAAQ-YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQ 61

Query: 64  YGADEGLPELRDALVKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
           Y    G P L  AL K  +Q         + V+VT GA +A    +    D GD V++  
Sbjct: 62  YTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIE 121

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADW-----LEKTLETKPTPKLVSVVNPGN 175
           P++       +  G     +    +KT    +         +          + ++N  +
Sbjct: 122 PFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH 181

Query: 176 PSGTYI--PERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV------EGDHVVNLFS 227
                +     L    +   K     +  +    M                 +  + + S
Sbjct: 182 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGS 241

Query: 228 FSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW 284
             K + + GW++G+   P  +        Q        PI  +I             PE 
Sbjct: 242 AGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPEC 301

Query: 285 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-----------KHLDDFE 333
               +   +  +     +            +G  ++ A                   D+ 
Sbjct: 302 YFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYR 361

Query: 334 VVRWLAHRHGVVVIPGGACGC-------RGHLRISFGGLVEDDCKAAADRLRR 379
             +W+    G+  IP  A             +R  F    +++ + AA+ LR+
Sbjct: 362 FTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-KDENLQKAAEILRK 413

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score =  112 bits (281), Expect = 2e-28
 Identities = 89/377 (23%), Positives = 147/377 (38%), Gaps = 25/377 (6%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  Q+  L +    A++L+QG   +  P+   E++   V     ++Y    G+  LR+A+
Sbjct: 15  IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAI 72

Query: 78  VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
            +K  +         S + VTAGA +A    +  L   GD V+ F P Y +   +  +  
Sbjct: 73  AQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIAL-- 130

Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
            +  +V   + +  H   DW E         +LV +  P NPS T   +     +     
Sbjct: 131 -SGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIA 189

Query: 195 AAGSWLVVDNTYFMYDGRKH-------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 247
               +++ D  Y   +  +             +  V + SF K Y M GW+VGY   P+ 
Sbjct: 190 GHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP 249

Query: 248 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 307
               + ++ KV   +    +  +Q      L+  PE          + R+I+  AL+   
Sbjct: 250 ---ISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR 306

Query: 308 EGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISF 362
              +   EG  +L         LDD E  +WL   HGV  IP             +R+ F
Sbjct: 307 -LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF 365

Query: 363 GGLVEDDCKAAADRLRR 379
               E    AAA+RLR+
Sbjct: 366 -AKKESTLLAAAERLRQ 381

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  108 bits (269), Expect = 1e-26
 Identities = 63/406 (15%), Positives = 130/406 (32%), Gaps = 30/406 (7%)

Query: 6   KLAKRALETEMPI--MVQIQELVRGAKNAVSLAQGVVYWQPP----KMAMEKVKELVWDP 59
            ++  A     PI  +    +     K  + L+ G              ++K+KE +   
Sbjct: 4   SMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQ 63

Query: 60  SISKYGADEGLPELRDALVKKLNQENKLY--------KSSVMVTAGANQAFVNIVLTLCD 111
             + Y    G PE R+A+                   K +V++ +G +   +  +  +CD
Sbjct: 64  ECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD 123

Query: 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171
           AGD  ++  P + +     +  G+               D D + +  + K    +V+  
Sbjct: 124 AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNP 183

Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCV--------EGDHVV 223
           +    S                     +        ++ G+                  V
Sbjct: 184 SNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRV 243

Query: 224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFAT---QLLKVQDNIPICASIISQHLALYSLQT 280
            L   +K   + GWR+G++ Y        +    L +V   +    +++   L    L T
Sbjct: 244 ILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNT 303

Query: 281 GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----DDFEVVR 336
             E + + V  +  +   +   +      A     GA+YL +R+  +       D E   
Sbjct: 304 PQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFE 363

Query: 337 WLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 382
            L     V V+PG      G  R++      +  + A +R++   +
Sbjct: 364 KLLEEENVQVLPGTIFHAPGFTRLTT-TRPVEVYREAVERIKAFCQ 408

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score =  106 bits (263), Expect = 5e-26
 Identities = 86/397 (21%), Positives = 148/397 (37%), Gaps = 31/397 (7%)

Query: 7   LAKRALETEMPIMVQIQELVRGAKNA----VSLAQGVVYWQPPKMAMEKVKELVWDPSIS 62
            + R L TE   + ++      AK        L  G    + P++  E++ E    P + 
Sbjct: 1   FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYEN--KPEVV 58

Query: 63  KYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120
            Y    G+ ELR+A      +  ++     +V+VT G ++A +     + + GD +++  
Sbjct: 59  YYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLE 118

Query: 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180
           P+Y N     ++ GV  I   P + +     A             K + + NP NP+G  
Sbjct: 119 PFYANYNAFAKIAGVKLI---PVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVV 175

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236
             +  ++ + ++ +  G +L+VD  Y    F  +      +E D VV + S SK +   G
Sbjct: 176 YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACG 235

Query: 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296
            RVG +   +E        L      P     I     L    +  ++V E  ++ V   
Sbjct: 236 ARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETV 295

Query: 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH-----RHGVVVIPGGA 351
               E              GA Y+ A LP +  D  E  RW+           +V P   
Sbjct: 296 LKKLEEHGLK---RFTKPSGAFYITAELPVE--DAEEFARWMLTDFNMDGETTMVAPLRG 350

Query: 352 CGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEE 383
                   +  +RI+   L +D    A D L  GL+ 
Sbjct: 351 FYLTPGLGKKEIRIAC-VLEKDLLSRAIDVLMEGLKM 386

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  102 bits (255), Expect = 6e-25
 Identities = 49/379 (12%), Positives = 104/379 (27%), Gaps = 44/379 (11%)

Query: 31  NAVSLAQGVVY---WQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85
             + L  GV        P M       + ++   +   Y    G PE + A+ + +  + 
Sbjct: 27  GKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDG 86

Query: 86  KLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
                  +   V           +  + +    V +  P + N        G+       
Sbjct: 87  LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRY 146

Query: 143 CSSKTLHPDADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
             ++T   D + ++  L        ++      NP+G  +       I+ + +  G+  +
Sbjct: 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPL 206

Query: 202 VDNTY--FMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRV----GYIAYPSEVE 249
           +D  Y  F     +              V+   S SK +G+   R        A  +  E
Sbjct: 207 IDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRE 266

Query: 250 GFATQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIREAL 303
                +  +              +    L T          +      ++R RE +   L
Sbjct: 267 LAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGEL 326

Query: 304 SPLGEG---AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 360
             L              ++             E V+ +    G+ ++           RI
Sbjct: 327 RDLSGSDRFGFVAEHRGMFSRLGATP------EQVKRIKEEFGIYMVGDS--------RI 372

Query: 361 SFGGLVEDDCKAAADRLRR 379
           +  GL ++     A  +  
Sbjct: 373 NIAGLNDNTIPILARAIIE 391

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.1 bits (245), Expect = 2e-23
 Identities = 72/404 (17%), Positives = 138/404 (34%), Gaps = 26/404 (6%)

Query: 6   KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWD---PSI 61
           K++K     +  I+ +I +     K+A+S   GV   +  P+  + ++ + + +      
Sbjct: 15  KISKIGQNMKSSIIREILKFAAD-KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYT 73

Query: 62  SKYGADEGLPELRDALVKKLNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
            +Y   EG P L+  ++K L +   +    + +++ T G+ QA   I     D     V+
Sbjct: 74  LQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVL 133

Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWL----EKTLETKPTPKLVSVVNPG 174
             P Y  +  +F+      ++V            +      +K  + K    +  V N  
Sbjct: 134 DDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFH 193

Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVE-----GDHVVNLFSFS 229
           NP+G        K + ++ +    ++V D+ Y                 G   V L +  
Sbjct: 194 NPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTF 253

Query: 230 KAYGMMGWRVGYIAYPSE---VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVT 286
                 G R+G +A   E       A Q   +                   L+     + 
Sbjct: 254 SKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIE 313

Query: 287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 346
              +        + E  S +        EG +++W  LPE   D +E+  +   R  V  
Sbjct: 314 LYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE-GFDTWEMFEYAK-RKKVFY 371

Query: 347 IPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           +PG            +R+SF    ++       RLR  + E  K
Sbjct: 372 VPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 415

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 97.6 bits (241), Expect = 4e-23
 Identities = 57/374 (15%), Positives = 118/374 (31%), Gaps = 16/374 (4%)

Query: 23  QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82
            +        V L+   + ++ P   +E +K+ + +      G      E +  + K + 
Sbjct: 24  SQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDET---VLGYTGPTEEYKKTVKKWMK 80

Query: 83  QENKLYKSSVM--VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILV 140
             ++    +     TAG   A  N V      GD V++  P Y+  +M+ +      I  
Sbjct: 81  DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC 140

Query: 141 GPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200
                   +       + L      K +   +P NP G    +  L++I D+   +   L
Sbjct: 141 ELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLML 200

Query: 201 VVDNTYF--MYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 252
             D  +F  +  G +H           D  +   + SK + + G  +  I   +      
Sbjct: 201 WSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRER 260

Query: 253 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 312
               +   +     ++  +   +   + G              R +         E    
Sbjct: 261 FTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320

Query: 313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDC 370
             EG    W       +D   +  ++ H+  +    G   G    G  RI+         
Sbjct: 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINL-AAPSSVI 379

Query: 371 KAAADRLRRGLEEL 384
           + + +RL + L++L
Sbjct: 380 QESLERLNKALKDL 393

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 93.0 bits (229), Expect = 1e-21
 Identities = 53/351 (15%), Positives = 115/351 (32%), Gaps = 13/351 (3%)

Query: 44  PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQA 101
                +E + + +    +  Y   +   E   A+    + ++       +V+        
Sbjct: 13  TAPCIIEALNQRL-MHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70

Query: 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161
              ++    + G+ VV+  P Y   Y + +    T + V                + +  
Sbjct: 71  VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 130

Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-----AGSWLVVDNTYFMYDGRKHCC 216
           KP  K++ + +P NP+G       L+ ++DLC+          + +D  +          
Sbjct: 131 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 190

Query: 217 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALY 276
           V       L S SK++ +      Y    +     A        +     S+++    + 
Sbjct: 191 VARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIA 250

Query: 277 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDFEVV 335
           + Q G  W+      L  N   I + ++           +     W  L   ++DD  + 
Sbjct: 251 AYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 310

Query: 336 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 384
           + L  +  V ++PG   G   RG +R++  G      +     L   +  +
Sbjct: 311 KALIEQEKVAIMPGYTYGEEGRGFVRLNA-GCPRSKLEKGVAGLINAIRAV 360

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 79.9 bits (196), Expect = 4e-17
 Identities = 37/345 (10%), Positives = 95/345 (27%), Gaps = 47/345 (13%)

Query: 62  SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121
           +  G+     ++ +  +K L  +        +     + A +  +L L        +   
Sbjct: 44  TYIGSSYFAEKVNEYGLKHLGGDEN---DKCVGFNRTSSAILATILALKPKKVIHYLPEL 100

Query: 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY 180
               S                      + ++D + + L        ++   +  +     
Sbjct: 101 PGHPSIER-----------SCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIE 149

Query: 181 IPERLLKRISDLCKAAGSWLVVDNTY----FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236
           +     K++ +  K   + + VD+       +   +      G  +V   +     G  G
Sbjct: 150 LEN--FKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRG 207

Query: 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296
             +       +      ++        + A          +L+    +  ER++      
Sbjct: 208 GLLAGKKELVD------KIYIEGTKFGLEAQPPLLAGIYRALKN---FNLERIRKAFERA 258

Query: 297 EIIREALSPLGEGAVKGGEGAIYLW-ARLPEKHL-------------DDFEVVRWLAHRH 342
           +    +        +K  +  I +   R P   +                E+   L   +
Sbjct: 259 KNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNY 318

Query: 343 GVVVIPG-GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 386
           G++ I   G  G    LRI       D  +   + + + + E +K
Sbjct: 319 GIITITVAGMPGASKSLRIDLT--SRDAERIDDNYIIKAIVESIK 361

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score = 67.1 bits (162), Expect = 6e-13
 Identities = 51/314 (16%), Positives = 103/314 (32%), Gaps = 20/314 (6%)

Query: 67  DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS 126
           +     + +   +       +    V+V+ GA++    ++   C+ G   +++ P  +  
Sbjct: 55  ECQPKAVIENYAQYAG----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 110

Query: 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186
           Y     T        P             +K    K     V V +P NP+G  I  +  
Sbjct: 111 YSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKV----VYVCSPNNPTGQLINPQDF 166

Query: 187 KRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 244
           + + +L +     +  +                E  H+  L + SKA+ + G R G+   
Sbjct: 167 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 226

Query: 245 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 304
             EV     +++         A I +Q L+   +    E V + + +       ++E   
Sbjct: 227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKE--- 283

Query: 305 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 364
            +            Y+ AR          V + L  +  ++          G LRI+ G 
Sbjct: 284 -IPCVEQVFDSETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG- 337

Query: 365 LVEDDCKAAADRLR 378
              ++ +   D LR
Sbjct: 338 -TREESQRVIDALR 350

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 59.0 bits (141), Expect = 3e-10
 Identities = 35/360 (9%), Positives = 77/360 (21%), Gaps = 22/360 (6%)

Query: 22  IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81
              L       +  +  +     P      + + +    I +Y  D     L  AL +  
Sbjct: 14  ATVLGISPDQLLDFSANINPLGMPVSVKRALIDNL--DCIERY-PDADYFHLHQALARHH 70

Query: 82  NQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
                       + AG  +      +         ++  P +     +   +G       
Sbjct: 71  QVPAS------WILAGNGETESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWS 124

Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
              +               T     L                 L            + ++
Sbjct: 125 LREADGWQLT--DAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLIL 182

Query: 202 VDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 261
            +                    +++               + Y    +  A   ++ Q  
Sbjct: 183 DEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM 242

Query: 262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 321
                ++ +             W       L        +AL  L    V  G  A YL 
Sbjct: 243 PWSVNALAALAG--EVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPG-RANYLL 299

Query: 322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRR 379
            R      +D ++ R L     +++            + R++         +     LR 
Sbjct: 300 LRCER---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRN 353

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.2 bits (131), Expect = 4e-09
 Identities = 45/329 (13%), Positives = 97/329 (29%), Gaps = 24/329 (7%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D  + EL     +   +E      + +            ++     GD V++ A  +
Sbjct: 30  YGEDPTINELERLAAETFGKE------AALFVPSGTMGNQVSIMAHTQRGDEVILEADSH 83

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT 179
              Y    M  ++ ++  P   K    D D + K +       P   L+++ N  N SG 
Sbjct: 84  IFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG 143

Query: 180 YIPER-LLKRISDLCKAAGSWLVVDNTYF--MYDGRKHCCVEGDHVVNLFSFSKAYGMMG 236
            +     +K I  + K  G  + +D                E     +   F  + G+  
Sbjct: 144 RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCA 203

Query: 237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 296
                +    +    A +  K+       A +++    +   +          K+   N 
Sbjct: 204 PVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRL-----KEDHENA 258

Query: 297 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 356
             +   L  +G            +  R     ++    +  L    GV+           
Sbjct: 259 RFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALR-NSGVLANAVS----DT 313

Query: 357 HLRISFG-GLVEDDCKAAADRLRRGLEEL 384
            +R+     +  +D + A +   +   + 
Sbjct: 314 EIRLVTHKDVSRNDIEEALNIFEKLFRKF 342

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 53.8 bits (128), Expect = 2e-08
 Identities = 51/373 (13%), Positives = 109/373 (29%), Gaps = 55/373 (14%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA---GDSVVMFA 120
           Y       +L+D   +  N +  +         GA      ++L          + V  +
Sbjct: 71  YAGSRNYYDLKDKAKELFNYDYIIPAHQ---GRGAENILFPVLLKYKQKEGKAKNPVFIS 127

Query: 121 PYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-----DADWLEKTLETKPTPKLVSVV 171
            ++F++            +  +      S+T        D   L++ +       +V++V
Sbjct: 128 NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV 187

Query: 172 NPGNP---SGTYIPERLLKRISDLCKAAGSWLVVDNTYF---MYDGRKHCC--------- 216
           +        G  +    LK + ++ K  G ++V+D+  F    Y  +             
Sbjct: 188 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKE 247

Query: 217 --VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------DNIPICASI 268
              +     +  + S     +    G +A     E F     +            +    
Sbjct: 248 VIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRD 307

Query: 269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL--GEGAVKGGEGAIYLWARLPE 326
           ++  +      T  E++  R+  +    + +REA  P+    G          L  ++P 
Sbjct: 308 MAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPG 367

Query: 327 KHLDDFEVVRWLAHRHGVVVIPGGAC-------------GCRGHLRISFGGLV--EDDCK 371
                  V+  L    GV  +  G+                   +R++    V   D   
Sbjct: 368 DQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMD 427

Query: 372 AAADRLRRGLEEL 384
             AD L    E+ 
Sbjct: 428 YIADALIGLKEKF 440

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 51.1 bits (121), Expect = 1e-07
 Identities = 29/308 (9%), Positives = 87/308 (28%), Gaps = 21/308 (6%)

Query: 89  KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY--YFNSYMSFQMTGVTHILVGPC-SS 145
             ++        +    +        S V+  PY  + +   +    G+   LV      
Sbjct: 130 VHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDG 189

Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
             ++   + +E  ++ +        V              +  I+ +C+      +++  
Sbjct: 190 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGA 249

Query: 206 YFM----YDGRKHCCVEGDHVVNLFSFSKA-YGMMGWRVGYIAYPSEVEGFATQLLKVQD 260
           Y +    Y  +     +      + S  K     +G  + Y      ++  +        
Sbjct: 250 YAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRAS 309

Query: 261 NIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIREALSPLGEGAVK 312
             P+  +++S                    + + E + DL +        +       + 
Sbjct: 310 ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCIS 369

Query: 313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCK 371
                + + A+L    +     ++   H  G   +         ++ ++   G+  +D  
Sbjct: 370 VNSDPVEIAAKLYNLRVTGPRGIKKTDH-FGNCYLGTYTH---DYIVMNAAIGVRTEDIV 425

Query: 372 AAADRLRR 379
            +  +L +
Sbjct: 426 NSVSKLEK 433

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 49.0 bits (115), Expect = 4e-07
 Identities = 47/363 (12%), Positives = 111/363 (30%), Gaps = 37/363 (10%)

Query: 18  IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
           I  +        ++   LA     +  P+  +++V   +   ++  Y  D    EL + +
Sbjct: 7   IAKRAYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKI 65

Query: 78  VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
           +  L+ +                 F++        G   +++          F     + 
Sbjct: 66  LSYLDTD-----------------FLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSC 108

Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
             +   +      +    +     +       VV   NP+         + I  + K   
Sbjct: 109 YRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGA 168

Query: 198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 256
              + +  Y F  +       + +++  + +FSKA+ +   RVGY+    +      ++ 
Sbjct: 169 FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR 228

Query: 257 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 316
              +   +                  E   ER K +V  RE ++ AL  +G         
Sbjct: 229 LPFNVSYVSQMFAKVA------LDHREIFEERTKFIVEERERMKSALREMGYRITDSR-- 280

Query: 317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 376
             +++  + ++  +   ++  L     V V        R  +RI+ G    ++       
Sbjct: 281 GNFVFVFMEKE--EKERLLEHLR-TKNVAVR-----SFREGVRITIG--KREENDMILRE 330

Query: 377 LRR 379
           L  
Sbjct: 331 LEV 333

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.7 bits (114), Expect = 6e-07
 Identities = 40/324 (12%), Positives = 94/324 (29%), Gaps = 24/324 (7%)

Query: 72  ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
            + + L K L  +         VT GA +A   ++ +L      VVM    +++SY++ +
Sbjct: 51  FIHNQLPKFLGCD------VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAE 104

Query: 132 MTGVTHILVGPCSSKTLHPDADWLE---KTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188
             G+   LV            +      +  + +    L  +  P    G     + + +
Sbjct: 105 RAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAK 164

Query: 189 ISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 248
           +           ++ N  +          E      + S  K+    G  +G +    E 
Sbjct: 165 VCSEYD----VPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASG-PIGVMGMKEEW 219

Query: 249 -----EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
                        K  + +   A   +    + S     E + +R  + V         +
Sbjct: 220 AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERI-KRWDEEVEKARRFAAEM 278

Query: 304 SPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH---LR 359
             LG   +         ++      +    +        +  +          G     +
Sbjct: 279 EKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFK 338

Query: 360 ISFGGLVEDDCKAAADRLRRGLEE 383
           +S  GL +++     +  +  +E+
Sbjct: 339 LSTYGLSDEEVDYVLNAFKEIIEK 362

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.6 bits (112), Expect = 1e-06
 Identities = 42/363 (11%), Positives = 98/363 (26%), Gaps = 37/363 (10%)

Query: 59  PSISKYGADEGLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCDAG 113
               K      L ++ ++LV  + +   ++  +      M T  +       +       
Sbjct: 81  AVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKA 140

Query: 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVN 172
             ++       + + S    G   +++        L  D   +E  ++      ++ + +
Sbjct: 141 KYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHS 200

Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFS 229
                        L+ ++ +C       VV+N Y                   ++ F  S
Sbjct: 201 T-TACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQS 259

Query: 230 --KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 287
             K + +         +        +++   + +      ++   L+L       + + E
Sbjct: 260 LDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSL-GCSGYRKLLKE 318

Query: 288 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLDDFEVVRWLAHRHGV 344
           R +  V     +++      E  ++     I L   L      H      +  +     V
Sbjct: 319 RKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQV 378

Query: 345 ----VVIPGGACGCRGHLRISFG-----------------GLVEDDCKAAADRLRRGLEE 383
                V  G      GH    F                  G+   D      RL + L  
Sbjct: 379 SGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 438

Query: 384 LVK 386
           + K
Sbjct: 439 VRK 441

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 47.2 bits (110), Expect = 2e-06
 Identities = 31/317 (9%), Positives = 71/317 (22%), Gaps = 9/317 (2%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           YG D    +    + + L + +         T     A    +        + +     +
Sbjct: 31  YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTH 90

Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
               +      V          +    ++   E   E    PKLV + N       Y  +
Sbjct: 91  ETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQ 150

Query: 184 RLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 243
            L    +   +      +               +    +  L             +   A
Sbjct: 151 ELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEA 210

Query: 244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 303
                +        +        +        + +        E      +   I++  L
Sbjct: 211 LIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL 270

Query: 304 SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 363
              G            L+  L         ++  L +   +  +     G    +R+   
Sbjct: 271 EACGIRLAWPSASNQ-LFPILEN------TMIAELNNDFDMYTVEPLKDG-TCIMRLCTS 322

Query: 364 GLV-EDDCKAAADRLRR 379
               E +C    + L+R
Sbjct: 323 WATEEKECHRFVEVLKR 339

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 45/363 (12%), Positives = 106/363 (29%), Gaps = 34/363 (9%)

Query: 50  EKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107
            ++        I     D  + + E+++ +       N     +++++   + A    ++
Sbjct: 32  PRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNP---LTLVISGSGHCALEAALV 88

Query: 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167
            + + GDS ++ A   +          +   +         H     +E+    +  P L
Sbjct: 89  NVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE-GLAQHKPVL 147

Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFS 227
           + + +  + +G   P   L    +LC      L+VD+   +     +   +G  ++   S
Sbjct: 148 LFLTHGESSTGVLQP---LDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGS 204

Query: 228 FSKAYGMMG----------------------WRVGYIAYPSEVEGFATQLLKVQDNIPIC 265
                   G                           I + +   G   Q       IP+ 
Sbjct: 205 QKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVI 264

Query: 266 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 325
           +    +       + G E    + ++         +AL                    +P
Sbjct: 265 SLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVP 324

Query: 326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLV--EDDCKAAADRLRRGLEE 383
               D  ++V ++     + ++ G        LRI   G     ++     + LR  L+ 
Sbjct: 325 A-GYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQH 383

Query: 384 LVK 386
             K
Sbjct: 384 CPK 386

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 43.8 bits (102), Expect = 3e-05
 Identities = 38/394 (9%), Positives = 98/394 (24%), Gaps = 62/394 (15%)

Query: 48  AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG--ANQAFVNI 105
           A+ +  +         +        L +++          Y+ ++    G  A Q ++ +
Sbjct: 54  AVTQSMQAAMMRGDEAFSGSRSYYALAESVKNIFG-----YQYTIPTHQGRGAEQIYIPV 108

Query: 106 VLT------LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG--------PCSSKTLHPD 151
           ++         D    V     ++  +    Q+ G T   V                + D
Sbjct: 109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFD 168

Query: 152 ADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD----- 203
            + LE+ +E       P +V+ +   +  G  +    LK +  + K     +V+D     
Sbjct: 169 LEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFA 228

Query: 204 -------NTYFMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 254
                       Y       +  +     ++ + S     M    G +    +       
Sbjct: 229 ENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYT 288

Query: 255 LLKVQ--------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 306
             +              +    + +           +W+  R+  +    + + E     
Sbjct: 289 ECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVC 348

Query: 307 GEGAVKGGEGAIYLWA-RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------- 354
            +                +P        +   L    G+  +  G+              
Sbjct: 349 QQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLP 408

Query: 355 --RGHLRISFG--GLVEDDCKAAADRLRRGLEEL 384
                LR++       +       +  +   E  
Sbjct: 409 CPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 37.1 bits (85), Expect = 0.003
 Identities = 34/325 (10%), Positives = 80/325 (24%), Gaps = 51/325 (15%)

Query: 64  YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
           Y   E    L   + +    ++      ++ T     A   +       G  V     + 
Sbjct: 71  YAGSENFYHLEKTVKELFGFKH------IVPTHQGRGAENLLSQLAIKPGQYVAGNMYFT 124

Query: 124 FNSY----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSVVN 172
              +             +       L  P        D + L   ++ K    +    + 
Sbjct: 125 TTRFHQEKNGATFVDIVRDEAHDASLNLP---FKGDIDLNKLATLIKEKGAENIAYICLA 181

Query: 173 PGNPSGTYIPERL--LKRISDLCKAAGSWLVVDNTYFM---YDGRKHCCVEGDHVVNL-- 225
                    P  +  ++ + ++    G  +  D T  +   Y  ++      +  +    
Sbjct: 182 VTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIV 241

Query: 226 -----------FSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDNIPICASIISQH 272
                       S  K   +       +              + +   +    A    + 
Sbjct: 242 HEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEA 301

Query: 273 LALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA---IYLWARLPEKH 328
           +A+   +    E++  R    V+    + + L   G   V+   G    +      P   
Sbjct: 302 MAIGLREAMQYEYIEHR----VKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLT 357

Query: 329 LDDF---EVVRWLAHRHGVVVIPGG 350
            D F    +   +    GV  +  G
Sbjct: 358 QDQFPAQSLAASIYMETGVRSMERG 382

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 94  VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153
            TA    A    +LTLC  GD +V  +  Y  ++     +       G           +
Sbjct: 83  ATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKF---GINVRFVDAGKPE 139

Query: 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRK 213
            +   +  +       VV    P+   +    ++ ++ +    G+ LVVDNT+     ++
Sbjct: 140 EIRAAMRPETK-----VVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ 194

Query: 214 HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 273
              +  D VV+  S +K     G  +G I    +      + + ++D    C S  +  L
Sbjct: 195 PLQLGADIVVH--SVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWL 252

Query: 274 ALYSLQT 280
            L  ++T
Sbjct: 253 TLRGVKT 259

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	398
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.97
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.97
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.96
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.96
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.95
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.95
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.95
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.94
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.94
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.93
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.92
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.92
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.92
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.92
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.91
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.91
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.91
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.91
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.9
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.9
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.9
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.9
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.9
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.9
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.9
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.9
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.9
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.89
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.89
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.89
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.89
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.88
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.88
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.88
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.87
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.86
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.86
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.86
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.85
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.85
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.85
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.84
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.84
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.83
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.83
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.83
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.82
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.8
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.8
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.79
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.78
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.75
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.72
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.68
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.54
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.54
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	86.78
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	81.43

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=1.1e-57  Score=425.20  Aligned_cols=372  Identities=24%  Similarity=0.439  Sum_probs=329.2

Q ss_pred             hhHhHHhhccCch----HHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015890            5 AKLAKRALETEMP----IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK   80 (398)
Q Consensus         5 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~   80 (398)
                      ||+++|+.....+    ......++.+.|.++++|+.|+|++++|+.+++++.+.+.++ .++|++..|..++|++++++
T Consensus         1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lR~aia~~   79 (388)
T d1j32a_           1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK   79 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred             CchhhHhhcCCcCHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence            7899998875533    344556666789999999999999999999999999988764 57899999999999999999


Q ss_pred             HhhhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHH
Q 015890           81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEK  157 (398)
Q Consensus        81 l~~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~  157 (398)
                      +.+.++  +++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+ +.+ ++++.+|++++++
T Consensus        80 ~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~-~~~~~~~~~~d~~~l~~  158 (388)
T d1j32a_          80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ  158 (388)
T ss_dssp             HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred             HHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEE-ecccccccCCCHHHHHH
Confidence            988875  468899999999999999999999999999999999999999999999999988 654 4568899999999


Q ss_pred             hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc------cCCcEEEEcccc
Q 015890          158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFS  229 (398)
Q Consensus       158 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~------~~~~~i~~~s~s  229 (398)
                      .+++++  +++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.+++......      ..++++++.|+|
T Consensus       159 ~~~~~~--~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~S  236 (388)
T d1j32a_         159 AITPKT--KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA  236 (388)
T ss_dssp             HCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred             hCCCCC--eEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCCh
Confidence            998765  99999999999999999999999999999999999999999  66655433221      125789999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                      |.|+++|+|+||++++   +++++.+.........+.+...|.++...+....+++++.++.++++++.+.+.|++.+++
T Consensus       237 K~~~~~GlRvG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  313 (388)
T d1j32a_         237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL  313 (388)
T ss_dssp             TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             hhhhcchhHeEEEEEC---HHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999   8899888877776777888999999988888777889999999999999999999998777


Q ss_pred             ccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+..|++++|+|+++++...++.+++.+|++++||.+.||+.|+.++++|++++. +++++++++++|+++++.+
T Consensus       314 ~~~~p~gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~-~~e~l~~al~rl~~~l~~l  387 (388)
T d1j32a_         314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHh
Confidence            8888999999999998766678899999998999999999999999999999995 8899999999999999876

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.7e-55  Score=406.34  Aligned_cols=364  Identities=26%  Similarity=0.473  Sum_probs=313.2

Q ss_pred             HhHHhhccCchHHHHH----HHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQI----QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~----~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.....+.++++    +++..+|.++|+|+.|+|++++|+.+++++.+++.++ .++|++..|.+++|+++++++.
T Consensus         4 ~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~lR~~ia~~~~   82 (382)
T d1b5pa_           4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR   82 (382)
T ss_dssp             CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-CcCCCCCCCCHHHHHHHHhhhh
Confidence            7889888776666554    4556679999999999999999999999999988765 5789999999999999999998


Q ss_pred             hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhh
Q 015890           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l  159 (398)
                      +.++  +++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.+ +.+ ++++.+|++.+++.+
T Consensus        83 ~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~  161 (382)
T d1b5pa_          83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI  161 (382)
T ss_dssp             HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred             hhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEE-ecccccccCCCHHHHHHhC
Confidence            8775  568999999999999999999999999999999999999999999999999998 654 456889999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc--ccCCcEEEEcccccccCCC
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC--VEGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~  235 (398)
                      ++++  +++++++||||||.+++.+++++|+++|++||+++|+||+|  +.+++.....  ...+++++++|+||.|+++
T Consensus       162 ~~~~--~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  239 (382)
T d1b5pa_         162 TPRT--KALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT  239 (382)
T ss_dssp             CTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred             CCCC--eEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCc
Confidence            8764  99999999999999999999999999999999999999999  6776654332  3467899999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      |+|+||++++   +++++.+.........+++.+.+.++...+..   ...+....++.++++++.+.+.+.+.+. .+.
T Consensus       240 GlR~G~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~  315 (382)
T d1b5pa_         240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGL-KAV  315 (382)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CBC
T ss_pred             HhheEEEEEC---HHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCC-eEe
Confidence            9999999999   78888888777777778888888887777764   1245566677778888888888888765 778


Q ss_pred             cCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          313 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      .|++++|+|+++++...+...+.+.++ ++||.+.||+.|+.++++|++++. +++++++++++|.++
T Consensus       316 ~p~gg~~~~~~~~~~~~~~~~~~~~l~-e~gV~v~PG~~F~~~~~iRis~~~-~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYAT-SEENLRKALERFARV  381 (382)
T ss_dssp             CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCS-CHHHHHHHHHHGGGG
T ss_pred             cCCceEEEeEeCCCCCCCHHHHHHHHH-HCCEEEEeCcccCCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence            889999999999765556667777664 889999999999999999999985 788999999998875

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.3e-54  Score=405.30  Aligned_cols=370  Identities=26%  Similarity=0.437  Sum_probs=323.2

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +|+|+...+.+.++++..+..+++++|+|+.|.|++++|+.+++++.+++.+. ..+|++..|..++|+++++++++.++
T Consensus         2 ~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~   80 (388)
T d1gdea_           2 LSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNG   80 (388)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             hhhhhhhCCccHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHHHHHHHHHHHhhcc
Confidence            68888888889999999998888999999999999999999999999988764 56899999999999999999987654


Q ss_pred             ---CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccC
Q 015890           87 ---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK  162 (398)
Q Consensus        87 ---~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~  162 (398)
                         .++++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|.+++.+ +.++ +++.+|+++|++.++++
T Consensus        81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~  159 (388)
T d1gdea_          81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVTDK  159 (388)
T ss_dssp             CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCCTT
T ss_pred             ccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEe-ecccccCCCCCHHHHHHhCccC
Confidence               346789999999999999999999999999999999999999999999999999 7654 46789999999999876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-----ccCCcEEEEcccccccCCC
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-----VEGDHVVNLFSFSKAYGMM  235 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~  235 (398)
                      +  +++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+.+.+...     ...+++++++|+||.||++
T Consensus       160 ~--~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  237 (388)
T d1gdea_         160 T--RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMT  237 (388)
T ss_dssp             E--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCG
T ss_pred             C--eEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCc
Confidence            5  99999999999999999999999999999999999999999  6555433221     1246899999999999999


Q ss_pred             cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          236 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       236 G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      |+|+||++++   +++++.+.........+.+.+.+.++..++....  .+..+..+.+.+++..+.+.|...+. .+..
T Consensus       238 GlR~G~ii~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  313 (388)
T d1gdea_         238 GWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL-PTVK  313 (388)
T ss_dssp             GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred             cccEEEEEee---ccchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccc-cccC
Confidence            9999999999   7888888887777788889999999998887622  34566677788888888899888776 6677


Q ss_pred             CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          314 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      |.+++|+|++++....+..++++++++++||.+.||+.|+.  ++++||+++. +++++++++++|++++++..
T Consensus       314 p~gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~-~~e~l~~al~rL~~~l~e~k  386 (388)
T d1gdea_         314 PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKERK  386 (388)
T ss_dssp             CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence            88899999999865567889999999889999999998864  6899999985 78999999999999998753

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=1.3e-52  Score=391.54  Aligned_cols=371  Identities=25%  Similarity=0.393  Sum_probs=310.8

Q ss_pred             hHhHHhhccCchHHHH----HHHHHHcCCCeEEcCCccC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 015890            6 KLAKRALETEMPIMVQ----IQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV   78 (398)
Q Consensus         6 ~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~l~~g~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~   78 (398)
                      +.++|+.... ..+++    .+++.++|+++++|+.|.|   ++++|+.+++++.+++.+. .++|++..|.+++|++++
T Consensus         3 ~~s~r~~~~~-~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~~LR~aia   80 (395)
T d1xi9a_           3 RASKRALSVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIV   80 (395)
T ss_dssp             CCCHHHHTCC-C-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred             cchhccccCc-HHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence            4678888653 44554    4567778999999999986   7889999999999998764 567999999999999999


Q ss_pred             HHHhhhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHHH
Q 015890           79 KKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWL  155 (398)
Q Consensus        79 ~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l  155 (398)
                      +++++.++.  ++++|++++|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+ +. .++++.+|++.+
T Consensus        81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~~  159 (395)
T d1xi9a_          81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDI  159 (395)
T ss_dssp             HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHH
T ss_pred             HhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEE-eccccccccchHHHH
Confidence            999998765  57899999999999999999999999999999999999999999999999988 54 355788999999


Q ss_pred             HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc---cccCCcEEEEccccc
Q 015890          156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC---CVEGDHVVNLFSFSK  230 (398)
Q Consensus       156 ~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~---~~~~~~~i~~~s~sK  230 (398)
                      ++.+.+++  +++++++||||||.+++.+++++|+++|+++++++|.||+|  +.+++....   ....++++++.|+||
T Consensus       160 ~~~~~~~~--~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK  237 (395)
T d1xi9a_         160 RKKITDRT--KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSK  237 (395)
T ss_dssp             HHHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTT
T ss_pred             HHhhcccc--cEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcch
Confidence            99998765  99999999999999999999999999999999999999999  556543322   234568999999999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCC
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG  307 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  307 (398)
                      .|+++|+|+||+++.+. ...+..+.   ........+++.+.|.++..++....+++++.++.++++++.+.+.|++.+
T Consensus       238 ~~~~~GlRvG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  316 (395)
T d1xi9a_         238 VYFATGWRLGYMYFVDP-ENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIP  316 (395)
T ss_dssp             TTCCGGGCCEEEEEECT-TCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             hcccchhhcEeeEecCH-HHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999875431 12222222   122233567788899998888887678999999999999999999999988


Q ss_pred             CCccccCCccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          308 EGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      ...+..|++++|+|++++.. ..++.+++.++++++||.+.||+.|+.  ++++||+++. +.+++++++++|.+++++
T Consensus       317 ~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~-~~e~l~eal~rl~~~l~e  394 (395)
T d1xi9a_         317 GISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRFEKFMKE  394 (395)
T ss_dssp             TEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred             CceecCCCeeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence            77788899999999998753 246788899999899999999999864  7899999985 789999999999999875

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=6.5e-51  Score=383.22  Aligned_cols=368  Identities=22%  Similarity=0.341  Sum_probs=314.4

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      |.+++|+.+...+.|.++.+...+ .+.|||+.|.|++++|+.+++++.+.+.+..  .++|++..|.+++|++++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~   80 (418)
T d2r5ea1           2 FDLPKRYQGSTKSVWVEYIQLAAQ-YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS   80 (418)
T ss_dssp             CCCCGGGTTCCCCHHHHHHHHHHH-HCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred             CchhhhhcCCCCCHHHHHHHHhcC-CCCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHH
Confidence            567889999999999999887755 6899999999999999999999999887543  4579999999999999999999


Q ss_pred             hhcCC--C-CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC---------CCCC
Q 015890           83 QENKL--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHP  150 (398)
Q Consensus        83 ~~~~~--~-~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~  150 (398)
                      +.+|.  + .++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+.+         .+.+
T Consensus        81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~  159 (418)
T d2r5ea1          81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVL  159 (418)
T ss_dssp             HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEESCCSSCEEGGGEEC
T ss_pred             HHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEE-Eecccccccchhhhhhhh
Confidence            88765  3 4789999999999999999999999999999999999999999999998888 65433         2456


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-----cccCCcEE
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-----CVEGDHVV  223 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-----~~~~~~~i  223 (398)
                      +.+.+.......+  +++++++||||||.+++.+++++|+++|+++|+++|.||+|  +.+++....     ....++++
T Consensus       160 ~~~~~~~~~~~~~--~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i  237 (418)
T d2r5ea1         160 DNNELEALFNEKT--KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI  237 (418)
T ss_dssp             CHHHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEE
T ss_pred             hHHHHhhhhhccc--cceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceee
Confidence            7788888776654  99999999999999999999999999999999999999999  665543221     11246889


Q ss_pred             EEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNR  296 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~  296 (398)
                      ++.|+||.+++||+|+||++++   +++++.+........++.+.+.|.++...+..       .+.++.+.++.++.++
T Consensus       238 ~~~S~SK~~~~pGlRiG~~~~~---~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r  314 (418)
T d2r5ea1         238 TIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR  314 (418)
T ss_dssp             EEEEHHHHTTCGGGCCEEEESC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred             eeecCCccccCCCccccccccc---chhhhhhhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhh
Confidence            9999999999999999999999   88999888877767788888888877766542       3467888899999999


Q ss_pred             HHHHHHhccCCCCccccCCccEEEEeeCCC-----------CCCChHHHHHHHHHhcCeEEecCCCCCC-------CCeE
Q 015890          297 EIIREALSPLGEGAVKGGEGAIYLWARLPE-----------KHLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHL  358 (398)
Q Consensus       297 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~i  358 (398)
                      +.+.+.|++.+. .+..|++++|+|++++.           ...++.+++++|++++||.+.||+.|+.       .++|
T Consensus       315 ~~l~~~L~~~g~-~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~i  393 (418)
T d2r5ea1         315 DYMASFLAEVGM-NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFV  393 (418)
T ss_dssp             HHHHHHHHHTTC-EEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEE
T ss_pred             hhHHhhHhhcCC-cccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEE
Confidence            999999999865 88889999999998853           1235778999999889999999998863       4789


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHH
Q 015890          359 RISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       359 Ri~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      |||++. +++++++++++|++.+
T Consensus       394 Ris~~~-~~e~l~~a~~rl~~~l  415 (418)
T d2r5ea1         394 RYCFFK-KDENLQKAAEILRKWK  415 (418)
T ss_dssp             EEECCS-CHHHHHHHHHHHHHHH
T ss_pred             EEEecC-CHHHHHHHHHHHHHHH
Confidence            999985 7899999999998865

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4e-50  Score=372.89  Aligned_cols=360  Identities=27%  Similarity=0.449  Sum_probs=303.5

Q ss_pred             hHHhhccC----chHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhh
Q 015890            8 AKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ   83 (398)
Q Consensus         8 ~~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~   83 (398)
                      |+|....+    ...-...++..+.|+++|+|+.|.|++++|+.+++++.+.+.++ ..+|++..|..++|+++++++.+
T Consensus         2 ~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~-~~~Y~~~~G~~~lR~aia~~~~~   80 (375)
T d1o4sa_           2 SRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIGE   80 (375)
T ss_dssp             CHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             chhhhhCCCCHHHHHHHHHHHHHHCCCCeEECCCcCCCCCCCHHHHHHHHHHHhcC-CcCCCCCcCCHHHHHHHHhhhhh
Confidence            55665333    33344455666789999999999999999999999999988765 56799999999999999999988


Q ss_pred             hcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc
Q 015890           84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE  160 (398)
Q Consensus        84 ~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~  160 (398)
                      .++  .+++++++|+|+++++..++.+++++||.|+++.|+|+.+...+...|...+.+ +.+ ++++.++.+.++....
T Consensus        81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  159 (375)
T d1o4sa_          81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLLV  159 (375)
T ss_dssp             HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTCC
T ss_pred             ccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccc-cccccccccchhHHHHHhhc
Confidence            776  468899999999999999999999999999999999999999999999888887 444 4457788898888877


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----cccCCcEEEEcccccccCC
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----CVEGDHVVNLFSFSKAYGM  234 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----~~~~~~~i~~~s~sK~~~~  234 (398)
                      .++  +++++++|+||||.+++.+++++|+++|++|+++||+||+|  +.++.....    ....+++++++|+||.|++
T Consensus       160 ~~~--~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l  237 (375)
T d1o4sa_         160 GKT--KAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSM  237 (375)
T ss_dssp             TTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTC
T ss_pred             cCc--cEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccC
Confidence            765  89999999999999999999999999999999999999999  444433222    2346799999999999999


Q ss_pred             CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          235 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       235 ~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      ||+|+||++++   ++.++.+...........+...+......++..   .....+.+.++++.+.+.|++.+. .+..|
T Consensus       238 ~G~R~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~~~~~~~l~~~g~-~~~~p  310 (375)
T d1o4sa_         238 TGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMGV-KFVEP  310 (375)
T ss_dssp             GGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTTC-CCCCC
T ss_pred             Ccccccccccc---ccchhhhhhhhccccccccccchhhhhhhcccc---hhhhHHHHHHHHHHHHHHHHhcCc-eEecC
Confidence            99999999999   788888877776666777777777777666542   334455677888888888888775 78889


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ++++|+|++++.   ++.+++.++++++||.++||+.|+.+++|||+++. +++++++++++|+++++
T Consensus       311 ~gg~f~~~~~~~---~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~-~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         311 EGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN  374 (375)
T ss_dssp             SBSSEEEEECSS---CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred             CccEEEEEECCC---CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence            999999999974   57888899988899999999999999999999985 88999999999998874

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.7e-50  Score=372.80  Aligned_cols=368  Identities=22%  Similarity=0.323  Sum_probs=309.4

Q ss_pred             HhHHhhccCchHHHHH----HHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQI----QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~----~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +|+|......+.++++    .+...+|.++++|+.|.|++++|+.+.+++.+....  ..+|++..|..++|+++++++.
T Consensus         1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~--~~~Y~~~~G~~~LR~aia~~~~   78 (389)
T d2gb3a1           1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPE--VVYYSHSAGIWELREAFASYYK   78 (389)
T ss_dssp             CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCS--SCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CChhhhcCCCCHHHHHHHHHHHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCcCCHHHHHHHHHHHH
Confidence            3667776666666664    344567899999999999999999999999876543  6789999999999999999999


Q ss_pred             hhcCC--CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc
Q 015890           83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE  160 (398)
Q Consensus        83 ~~~~~--~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~  160 (398)
                      +.+|+  ++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|..++.+ +.+.+++..+.+.+...+.
T Consensus        79 ~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  157 (389)
T d2gb3a1          79 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAIPQNLESFIN  157 (389)
T ss_dssp             HTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCCCTTGGGGCC
T ss_pred             HhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccc-ccccccccchhhhhhhhcc
Confidence            88764  68899999999999999999999999999999999999999999999999888 7776666666666777666


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc--cccCCcEEEEcccccccCCCc
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC--CVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      +++  +++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+++....  ....++++++.|+||.++++|
T Consensus       158 ~~~--~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~G  235 (389)
T d2gb3a1         158 ERT--KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACG  235 (389)
T ss_dssp             TTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGG
T ss_pred             cCc--cEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcc
Confidence            654  99999999999999999999999999999999999999999  666554332  234578899999999999999


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +|+||+++++  +.+.+...... ....+.+...+.++..++...+.++++.++.++++++.+.+.|+++++..+..|.+
T Consensus       236 lRiG~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~  312 (389)
T d2gb3a1         236 ARVGCLITRN--EELISHAMKLA-QGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSG  312 (389)
T ss_dssp             GCCEEEECSC--HHHHHHHHHHH-HHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSB
T ss_pred             cceeeeeccc--hhHHHHHhhhh-hccccccccccccccccccccchhcccccccccccchhhhhhhhhhccccccCCCc
Confidence            9999999985  44554444333 34566677888888888876667888999999999999999999998877788899


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHh-----cCeEEecCCCCCC-----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHh
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      ++|+|++++..  ++.+++++|+++     +||.+.||+.|+.     .+++||+++. +++++++++++|.++++++.
T Consensus       313 g~~~~~~lp~~--~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~-~~~~l~~a~~~L~~~lk~f~  388 (389)
T d2gb3a1         313 AFYITAELPVE--DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVL-EKDLLSRAIDVLMEGLKMFC  388 (389)
T ss_dssp             SSEEEEECSSS--CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCC--CHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHHHhh
Confidence            99999999753  688899988865     4788999987753     5799999985 88999999999999999874

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-49  Score=370.52  Aligned_cols=361  Identities=24%  Similarity=0.373  Sum_probs=312.0

Q ss_pred             HHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC
Q 015890            9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY   88 (398)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~   88 (398)
                      +|+.....+.+.++.+. ++++++|||+.|.|++++|+.+++++.+.+.++ .++|++..|..++|+++++++++.+|++
T Consensus         6 ~~~~~~~~~~~~~~~~~-a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~   83 (382)
T d1u08a_           6 SKLPQLGTTIFTQMSAL-AQQHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQ   83 (382)
T ss_dssp             CSCCCCCCCHHHHHHHH-HHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             hhCCCCCCcHHHHHHHH-hccCCCEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCC
Confidence            34444444556655554 566899999999999999999999999988764 6789999999999999999999988753


Q ss_pred             --CC-cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCC
Q 015890           89 --KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP  165 (398)
Q Consensus        89 --~~-~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~  165 (398)
                        ++ +|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|.....+ +.+++++.+|++++++.+++++  
T Consensus        84 ~~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--  160 (382)
T d1u08a_          84 PDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAALLSERT--  160 (382)
T ss_dssp             CCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHHCCTTE--
T ss_pred             CCCCceEEeccchHHHHHHHHhhcccccceEEEecccccchhhhhhhccccceec-ccccccccCCHHHHhhhhccCc--
Confidence              44 59999999999999999999999999999999999999999999988877 7777888899999999988765  


Q ss_pred             eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-----ccCCcEEEEcccccccCCCcce
Q 015890          166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       166 ~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      +++++++||||||.+++.+++++|+++|.+++++++.|+.|  +.+.+.....     ...++++++.|+||.++.||+|
T Consensus       161 ~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~R  240 (382)
T d1u08a_         161 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWK  240 (382)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGC
T ss_pred             cEEEECCCCcccccccccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCccc
Confidence            99999999999999999999999999999999999999999  4443322211     1246899999999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccE
Q 015890          239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI  318 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  318 (398)
                      +||++++   +++++.+.........+.+.+.|.++..+++..++++.+.++.++++++.+.+.+...+. .+..|++++
T Consensus       241 iG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~p~gg~  316 (382)
T d1u08a_         241 VGYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRL-EILPCEGTY  316 (382)
T ss_dssp             CEEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSC-EECCCCBSS
T ss_pred             chhhhcc---chhHHHHHhhhcccccccccccccccccccccchHHHHHHHHHHHhhhhhhhhhhccCCc-EEecCCceE
Confidence            9999999   788888888877778899999999999999877788999999999999999999987665 888899999


Q ss_pred             EEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          319 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       319 ~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      |+|++++.. ..++.+++++|++++||.+.||+.|+.    .++||||++. +++++++++++|++
T Consensus       317 ~~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~-~~e~l~~al~RL~~  381 (382)
T d1u08a_         317 FLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ  381 (382)
T ss_dssp             EEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHhC
Confidence            999999853 357889999999899999999998853    4689999986 78999999998875

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.7e-49  Score=373.02  Aligned_cols=363  Identities=20%  Similarity=0.276  Sum_probs=295.2

Q ss_pred             hHHHHHHH---HHHcCCCeEEcCCccCCCC----CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhc----
Q 015890           17 PIMVQIQE---LVRGAKNAVSLAQGVVYWQ----PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN----   85 (398)
Q Consensus        17 ~~~~~~~~---~~~~g~~~~~l~~g~~~~~----~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~----   85 (398)
                      ..++.+.+   +..+++++|+|+.|+|++.    +++.+++++.+.+.....++|++..|.+++|+++++++++.+    
T Consensus        14 ~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~   93 (412)
T d1bw0a_          14 NPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKE   93 (412)
T ss_dssp             CHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCST
T ss_pred             cHHHHHHHhcCCCCCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCccc
Confidence            44555543   2234567999999987653    457788888888777667789999999999999999998874    


Q ss_pred             ----CCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhc
Q 015890           86 ----KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE  160 (398)
Q Consensus        86 ----~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~  160 (398)
                          ++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ +.++ +++.++++.+++.++
T Consensus        94 ~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~l~~~~~  172 (412)
T d1bw0a_          94 ELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKD  172 (412)
T ss_dssp             TTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCC
T ss_pred             ccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCcccccc-ccccccccchhhHHHHhhhh
Confidence                2568899999999999999999999999999999999999999999999999998 7654 457889999999888


Q ss_pred             cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc--------cCCcEEEEccccc
Q 015890          161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV--------EGDHVVNLFSFSK  230 (398)
Q Consensus       161 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~--------~~~~~i~~~s~sK  230 (398)
                      ..+  +++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.|++......        ...+++++.|+||
T Consensus       173 ~~~--~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK  250 (412)
T d1bw0a_         173 DKT--KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK  250 (412)
T ss_dssp             TTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred             ccc--cccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCc
Confidence            765  99999999999999999999999999999999999999999  77765432211        1245788999999


Q ss_pred             ccCCCcceeEEEEccCCc---HHHHHHHHHhhccCCCCcchHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHhccC
Q 015890          231 AYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPICASIISQHLALYSL-QTGPEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      .++++|+|+||+++++..   ..++......... ..+.+...++++...+ ....+++.+.++.+.++++.+.+.|.+.
T Consensus       251 ~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~  329 (412)
T d1bw0a_         251 NLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGML-VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGEC  329 (412)
T ss_dssp             TTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHH-HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             cCccCCCCcccccccchhhcchhhhhhhcccccc-ccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHh
Confidence            999999999999887521   2344444333332 2334445555544444 4445788999999999999999999887


Q ss_pred             CCCccccCCccEEEEeeCCC----CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          307 GEGAVKGGEGAIYLWARLPE----KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      .++.+..|++++|+|++++.    ...++.+++++|++++||.+.||+.|+.+++||||++. +++++++++++|+++++
T Consensus       330 ~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~-~~e~l~eal~Rl~~~l~  408 (412)
T d1bw0a_         330 IGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQ  408 (412)
T ss_dssp             TTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred             cCceecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHH
Confidence            66678889999999998862    22467899999998899999999999999999999985 78999999999999887


Q ss_pred             HH
Q 015890          383 EL  384 (398)
Q Consensus       383 ~~  384 (398)
                      +.
T Consensus       409 ~~  410 (412)
T d1bw0a_         409 RH  410 (412)
T ss_dssp             HH
T ss_pred             hc
Confidence            64

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=374.70  Aligned_cols=365  Identities=22%  Similarity=0.349  Sum_probs=310.9

Q ss_pred             hHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhhhcC
Q 015890            8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      ++|+.+.+...|.+..+. ..++++|+|+.|.|++++|+.+.+++.+++.++. .++|++..|.+++|+++++++++.+|
T Consensus         4 ~~r~~~~~~~~~~~~~~~-~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g   82 (418)
T d1w7la_           4 ARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLG   82 (418)
T ss_dssp             CGGGTTCCCCTHHHHHHH-HHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             CccccCCCCCHHHHHHHH-hCCCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhC
Confidence            688888888888888776 4568999999999999999999999999987643 45799999999999999999998877


Q ss_pred             CC---CCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-----------CCCCCCCh
Q 015890           87 LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-----------SKTLHPDA  152 (398)
Q Consensus        87 ~~---~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~d~  152 (398)
                      .+   .++|++|+|+++++..++.+++++||.|+++.|+|+.|...+...|.+++.+ +..           +.++.+|.
T Consensus        83 ~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~d~  161 (418)
T d1w7la_          83 QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQLDP  161 (418)
T ss_dssp             CCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECC---CCSEEGGGEECCH
T ss_pred             CCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeecc-ccccccccccccccccCcccch
Confidence            64   2589999999999999999999999999999999999999999999988877 432           23456677


Q ss_pred             HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-----ccCCcEEEE
Q 015890          153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-----VEGDHVVNL  225 (398)
Q Consensus       153 e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-----~~~~~~i~~  225 (398)
                      +++.....+.+  +++++++||||||.+++.+++++|+++|+++++++|+||+|  +.|++.....     ...++++++
T Consensus       162 ~~~~~~~~~~~--~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~  239 (418)
T d1w7la_         162 MELAGKFTSRT--KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTI  239 (418)
T ss_dssp             HHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEE
T ss_pred             hhhhccccccc--cceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccccccccee
Confidence            77777776654  89999999999999999999999999999999999999999  7776543221     124689999


Q ss_pred             cccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC-------CchHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREI  298 (398)
Q Consensus       226 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~  298 (398)
                      .|+||.+++||+|+||++++   ++++..+.........+.+.+.|.++..++..       ...++.+.++.++++++.
T Consensus       240 ~S~SK~~~~pG~RvG~~v~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~  316 (418)
T d1w7la_         240 GSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDH  316 (418)
T ss_dssp             EEHHHHTTCGGGCCEEEECC---HHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHH
T ss_pred             cccCccccCCCCcccccccc---hhhhhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhh
Confidence            99999999999999999999   88999998888777888889998888887753       235778888899999999


Q ss_pred             HHHHhccCCCCccccCCccEEEEeeCCC------------CCCChHHHHHHHHHhcCeEEecCCCCC-------CCCeEE
Q 015890          299 IREALSPLGEGAVKGGEGAIYLWARLPE------------KHLDDFEVVRWLAHRHGVVVIPGGACG-------CRGHLR  359 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ll~~~gi~v~~g~~~~-------~~~~iR  359 (398)
                      +.+.|++.|. .+..|++++|+|++++.            ...++.+++.+|++++||.+.||+.|+       .+++||
T Consensus       317 l~~~L~~~g~-~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iR  395 (418)
T d1w7la_         317 MIRSLQSVGL-KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIR  395 (418)
T ss_dssp             HHHHHHTTTC-EEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEE
T ss_pred             hhhhhhhcCC-cccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEE
Confidence            9999998875 88889999999998752            112367889999999999999999885       257999


Q ss_pred             EEecCCCHHHHHHHHHHHHHHH
Q 015890          360 ISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       360 i~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ||++. +++++++++++|++..
T Consensus       396 is~~~-~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         396 FCFVK-DEATLQAMDEKLRKWK  416 (418)
T ss_dssp             EECCC-CHHHHHHHHHHHHHHH
T ss_pred             EEEcC-CHHHHHHHHHHHHHHh
Confidence            99985 8889999999998754

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-49  Score=368.00  Aligned_cols=356  Identities=27%  Similarity=0.387  Sum_probs=301.8

Q ss_pred             hhHhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 015890            5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      ||++.|+.....+.+.++... +++.++|||+.|.|++++|+.+++++.+.+.+  ..+|++..|..++|+++++++   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~l-a~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~--~~~Y~~~~G~~elr~aiA~~~---   74 (368)
T d1v2da_           1 MRLHPRTEAAKESIFPRMSGL-AQRLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF---   74 (368)
T ss_dssp             CCCCGGGGGC---CHHHHHHH-HHHHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred             CCCChhhhhcCCCHHHHHHHH-hccCCCEEecCCCCCCCCCHHHHHHHHHHhhc--ccCCCCCcCCHHHHHHHHhhc---
Confidence            788999998888888877543 55578999999999999999999999998876  468999999999999999987   


Q ss_pred             cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccC
Q 015890           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK  162 (398)
Q Consensus        85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~  162 (398)
                       ++++++|++|+|++++++.++.+++++||.|+++.|+|..+...++..|.+++.+ +.+  .+++.+|++.+++.+++.
T Consensus        75 -~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~  152 (368)
T d1v2da_          75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR  152 (368)
T ss_dssp             -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred             -ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCcccee-ccccccccccCCHHHHHHhhccC
Confidence             7889999999999999999999999999999999999999999999999988877 553  345778999999999876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-e-ccCCCcc--ccccCCcEEEEcccccccCCCcce
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-F-MYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~-~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      +  +++++++|+||||.+++.+++++|+++|++||+++|+||+| . .......  .....++.+++.|+||.++++|+|
T Consensus       153 ~--~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R  230 (368)
T d1v2da_         153 T--RALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYR  230 (368)
T ss_dssp             E--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGC
T ss_pred             c--eEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccc
Confidence            5  89999999999999999999999999999999999999999 3 2222211  223456788899999999999999


Q ss_pred             eEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          239 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      +||++.+   +++++.+.........+++.+.|.++..++..  ...++++.++.++++++.+.+.|++++. .+..|++
T Consensus       231 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~p~g  306 (368)
T d1v2da_         231 VGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGL-RVYVPEG  306 (368)
T ss_dssp             CEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTC-CEECCSB
T ss_pred             ccccccc---ccccchhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCc-EEecCCc
Confidence            9999999   67788787777767788889998888888764  2357888888899999999999998876 8888998


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ++|+|++++..  +..    ++++++||.++||+.|+    .+++||||++. +++++++++++|++++
T Consensus       307 ~~~~~~~l~~~--~~~----~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~-~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         307 TYFLMAELPGW--DAF----RLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVV  368 (368)
T ss_dssp             SSEEEEECTTC--CHH----HHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred             eeEEEEeCCcc--HHH----HHHHhCCEEEEechhhCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHhC
Confidence            99999999742  332    35678999999999885    35799999985 7899999999999864

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=3.5e-49  Score=368.55  Aligned_cols=361  Identities=18%  Similarity=0.240  Sum_probs=292.7

Q ss_pred             chHHHHHHHH-HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcE
Q 015890           16 MPIMVQIQEL-VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSV   92 (398)
Q Consensus        16 ~~~~~~~~~~-~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v   92 (398)
                      ...|..+.+. .+.|+++++|+.|+|++++|+.+++++.+++.++ .++|+  .+..++|+++++|+++++|+  ++++|
T Consensus        16 s~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~-~~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I   92 (394)
T d1c7na_          16 SLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWI   92 (394)
T ss_dssp             BHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGE
T ss_pred             CHHHHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC-CcCCC--CCCHHHHHHHHHHHHHhcCCCCCCcce
Confidence            3344433332 3467899999999999999999999999988764 56784  36789999999999988764  68899


Q ss_pred             EEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEE
Q 015890           93 MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSV  170 (398)
Q Consensus        93 ~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i  170 (398)
                      ++|+|+++++..++.+++++||.|+++.|.|+++.......|...+.+ +..  +..+.+|.+.++..+.... ++++++
T Consensus        93 ~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~d~~~~~~~~~~~~-~~~i~l  170 (394)
T d1c7na_          93 INTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDKN-NKALLF  170 (394)
T ss_dssp             EEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCTT-EEEEEE
T ss_pred             EeeccchhhhhhhhccccccccccccccCcccchhhHHhhhhhccccc-ccccccccccchhhhhhhhhcccc-ceEEEe
Confidence            999999999999999999999999999999999999999999998887 543  2346678888888876443 599999


Q ss_pred             eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc------cCCcEEEEcccccccCCCcceeEEE
Q 015890          171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYI  242 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~------~~~~~i~~~s~sK~~~~~G~r~G~i  242 (398)
                      ++||||||.+++.+++++|+++|+++++++|+||+|  +.+++......      ..++++++.|+||.++++|+|+||+
T Consensus       171 ~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~  250 (394)
T d1c7na_         171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI  250 (394)
T ss_dssp             ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred             cccccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccc
Confidence            999999999999999999999999999999999999  66655433221      1367899999999999999999999


Q ss_pred             EccCCcHHHHHHHHHhhccCCCCcchHH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccC-CCCccccCCccEEE
Q 015890          243 AYPSEVEGFATQLLKVQDNIPICASIIS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGGEGAIYL  320 (398)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~  320 (398)
                      ++++  +.+.+.+.........+..... +.++.........+.++..+.++++++.+.+.++.. ..+.+..|++++|+
T Consensus       251 ~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~  328 (394)
T d1c7na_         251 IIKN--PDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQ  328 (394)
T ss_dssp             ECCC--HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEE
T ss_pred             cccC--hhhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEE
Confidence            9886  6677777666554444443333 333333443345677888888888888888887753 34577778889999


Q ss_pred             EeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          321 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       321 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      |++++....++.+++++|+++.||.+.||+.|+.  ++++|||++. +++++++++++|+++++++
T Consensus       329 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~-~~e~i~eal~rl~~~l~~L  393 (394)
T d1c7na_         329 WIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDL  393 (394)
T ss_dssp             EEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHHhc
Confidence            9999865568899999999888999999999964  6799999985 7889999999999999886

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-47  Score=354.00  Aligned_cols=346  Identities=17%  Similarity=0.236  Sum_probs=283.6

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHHHHHHHHHh
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      +|+|+.|++++++||.+.+++.+.+.++ .++|++..| .++|+++++++.++++.  ++++|++|+|+++++..++.++
T Consensus         1 ~~~~~~~~~df~~p~~i~eal~~~~~~~-~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l   78 (361)
T d1d2fa_           1 LLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW   78 (361)
T ss_dssp             CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS
T ss_pred             CcCcCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhc
Confidence            5899999999999999999999988765 567977777 68999999999998864  6789999999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC--CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +++||+|++++|+|+++...++..|..++.+ +.+  .+++.+|++.+++.+.... ++++++++|+||||.+++.++++
T Consensus        79 ~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~~~~~~~~~~-~~~i~l~~p~NPTG~~~s~~~~~  156 (361)
T d1d2fa_          79 SETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKPE-CKIMLLCSPQNPTGKVWTCDELE  156 (361)
T ss_dssp             SCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTSTT-EEEEEEESSCTTTCCCCCTTHHH
T ss_pred             cccccccccccccccchhHHHHhhcceEEee-cccccccccccccccchhhcccCC-ceeEEecccccccccccchhhhh
Confidence            9999999999999999999999999988877 543  4556789999999997544 69999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCcc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH-HHHhhcc
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ-LLKVQDN  261 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~-l~~~~~~  261 (398)
                      +|+++|+++|+++|+||+|  +.+++...   .....++++++.|+||.++++|+|+||++...  +..... +......
T Consensus       157 ~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~--~~~~~~~~~~~~~~  234 (361)
T d1d2fa_         157 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSALKGR  234 (361)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECS--HHHHHHHHHHHHTT
T ss_pred             hhhhhhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecch--hHHHHHHhhhcccc
Confidence            9999999999999999999  66654332   22335678999999999999999999987664  333333 3333322


Q ss_pred             C-CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCccccCCccEEEEeeCCCCCCChHHHHHHHH
Q 015890          262 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       262 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      . ..+++...+.+....+....++.++.+..++++++.+.+.+.+ .+.+.+..|++++|+|++++....++.+++.+|+
T Consensus       235 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll  314 (361)
T d1d2fa_         235 DGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALI  314 (361)
T ss_dssp             SCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHH
T ss_pred             cccccchhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEccCCCCCHHHHHHHHH
Confidence            2 2334455555555556555567777778888888777776654 3445777888899999998755568899999999


Q ss_pred             HhcCeEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          340 HRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       340 ~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++||.+.||+.|+  ..++||+|++. +++++++++++|.++++++
T Consensus       315 ~~~gv~v~pG~~F~~~~~~~vRis~~~-~~e~l~~al~rl~~~l~~l  360 (361)
T d1d2fa_         315 EQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV  360 (361)
T ss_dssp             HTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCEEEEeccccCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHHhc
Confidence            88899999999986  35789999985 7899999999999999886

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=5.4e-46  Score=350.32  Aligned_cols=370  Identities=21%  Similarity=0.304  Sum_probs=285.5

Q ss_pred             HhHHhhc-cCchHHHHHHHHHHc-------CCCeEEcCCccCCCCCcHHHHHHHHHhhcCC----------CCCCCCCCC
Q 015890            7 LAKRALE-TEMPIMVQIQELVRG-------AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----------SISKYGADE   68 (398)
Q Consensus         7 ~~~~~~~-~~~~~~~~~~~~~~~-------g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~----------~~~~y~~~~   68 (398)
                      ++++-.- .+.+++....+...+       -+++|+|+++.|.+. ++.+.+.+.+.....          ....|++..
T Consensus         5 ~~~~~~~~~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~aen~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~   83 (428)
T d1iaya_           5 LATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYH   83 (428)
T ss_dssp             TGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTT
T ss_pred             ccccCCCCCCChhhHhHHHhccCCCCCcCCCCceEEeecccCccc-hHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCc
Confidence            4444332 335555544443332       256999999987763 566665555432211          134698999


Q ss_pred             CcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCcEEEEeccC
Q 015890           69 GLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPC  143 (398)
Q Consensus        69 ~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~  143 (398)
                      |.+++|+++++|++++++    +++++|++|+|++++++.++.+++++||+|+++.|+|+++...+.. .|++++.+ +.
T Consensus        84 G~~~LR~aiA~~l~~~~~~~~~~~~e~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v-~~  162 (428)
T d1iaya_          84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HC  162 (428)
T ss_dssp             CCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CC
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEe-ec
Confidence            999999999999998875    4588999999999999999999999999999999999999877764 47899998 66


Q ss_pred             C-CCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc-
Q 015890          144 S-SKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC-  215 (398)
Q Consensus       144 ~-~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~-  215 (398)
                      + .+++.+|.+.++..++    ...+++++++++|+||||.+++.+++++|+++|++||+++|+||+|  +.|++.+.. 
T Consensus       163 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s  242 (428)
T d1iaya_         163 ESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVS  242 (428)
T ss_dssp             CTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCC
T ss_pred             ccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccc
Confidence            5 4468899988876543    3444689999999999999999999999999999999999999999  666654321 


Q ss_pred             -----------cccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC---
Q 015890          216 -----------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---  281 (398)
Q Consensus       216 -----------~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---  281 (398)
                                 ....+++++++|+||.|+++|+|+||+++.+  +.+.+.+.....  ....+.+.+.++.+.+...   
T Consensus       243 ~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~--~~l~~~~~~~~~--~~~~~~~~~~~~~a~l~~~~~~  318 (428)
T d1iaya_         243 IAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFV  318 (428)
T ss_dssp             HHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHH
T ss_pred             cccccchhhccccccceEEEEecCCCcccCCCcccccccccc--cchhhhhhhhhc--ccccccccccchhhhhhhhccc
Confidence                       1134678999999999999999999999874  566666665543  3445666776666666541   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCC--C
Q 015890          282 PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACG--C  354 (398)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~--~  354 (398)
                      ++++++.++.+.++++.+.+.|+..|. .+..|++++|+|+++++..     .+..+++++|++++||.+.||+.|+  .
T Consensus       319 ~~~~~~~~~~l~~r~~~~~~~L~~~gi-~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~  397 (428)
T d1iaya_         319 DNFLRESAMRLGKRHKHFTNGLEVVGI-KCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQE  397 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSS
T ss_pred             cccccccccccchhHHHHHHHHHhCCC-EEecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCC
Confidence            245677777888888999999987765 7888999999999986432     1345678889988999999999886  4


Q ss_pred             CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          355 RGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       355 ~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                      +++||++++..+++++++++++|++++..
T Consensus       398 ~g~~Ris~a~~~~~~l~~al~Rl~~~l~~  426 (428)
T d1iaya_         398 PGWFRVCFANMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             SSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCCHHHHHHHHHHHHHHHhh
Confidence            78999999876778899999999998853

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=1.9e-46  Score=351.37  Aligned_cols=371  Identities=23%  Similarity=0.354  Sum_probs=297.4

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +++|+.....+.+|++.+. .+++++|+|+.|.|+..  +.+.+.+++.+.+...  ...+|++..|.+++|+++++++.
T Consensus         7 ~~~~~~~~~~s~ire~~~~-~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~   85 (403)
T d1wsta1           7 FSEKAMLMKASEVRELLKL-VETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWME   85 (403)
T ss_dssp             CCHHHHHCCCHHHHHHHHH-HTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCcHHHHHHHH-hCCCCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHH
Confidence            6888887777888887664 46689999999987542  4456666677665432  24679999999999999999999


Q ss_pred             hhcC--CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHH----
Q 015890           83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE----  156 (398)
Q Consensus        83 ~~~~--~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~----  156 (398)
                      +.++  +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ +.++.+.  +...+.    
T Consensus        86 ~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~~~~~~~  162 (403)
T d1wsta1          86 KRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISI-PLDDKGM--RVDLLEEKLE  162 (403)
T ss_dssp             HHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTEE--CHHHHHHHHH
T ss_pred             HHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeE-eecccCC--ccccccccch
Confidence            8775  568999999999999999999999999999999999999999999999999988 7765542  222222    


Q ss_pred             Hhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccc----cCCcEEEEcccc
Q 015890          157 KTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCV----EGDHVVNLFSFS  229 (398)
Q Consensus       157 ~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~----~~~~~i~~~s~s  229 (398)
                      .... ......++++++|+||||.+++.+++++|+++|++||+++|+||+|  +.+++.+....    ..+++++++|+|
T Consensus       163 ~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~S  242 (403)
T d1wsta1         163 ELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFS  242 (403)
T ss_dssp             HHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEEST
T ss_pred             hhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEcccc
Confidence            2222 2222456777899999999999999999999999999999999999  77766544322    357899999999


Q ss_pred             cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccC-
Q 015890          230 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPL-  306 (398)
Q Consensus       230 K~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~-  306 (398)
                      |.++ +|+|+||++++   +++++.+.........+.+...+.+....+...  +.++.+..+.+.++++.+.+.|.+. 
T Consensus       243 K~~~-~G~RiG~~i~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  318 (403)
T d1wsta1         243 KILA-PGFRIGWVAAH---PHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYM  318 (403)
T ss_dssp             TTTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceec-Ccccccccccc---hHHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9996 99999999999   888888877766666777888888877777652  2556777788888888888888764 


Q ss_pred             -CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          307 -GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                       .+..+..|.+++|+|+++++.. +...+++.|+ ++||.+.||+.|+.    ++++||+++..+++++++++++|++++
T Consensus       319 ~~~~~~~~p~gg~~~~~~~~~~~-~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l  396 (403)
T d1wsta1         319 PEGVEWTKPEGGMFVRVTLPEGI-DTKLMMERAV-AKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETI  396 (403)
T ss_dssp             CTTCEECCCSBSSEEEEECCTTC-CTTTTHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred             cCCeEEeCCCceeEEEEECCCCC-CHHHHHHHHH-HCCEEEEechhhcCCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence             2356777899999999998753 5666777664 88999999988753    579999998778999999999999999


Q ss_pred             HHHhcc
Q 015890          382 EELVKD  387 (398)
Q Consensus       382 ~~~~~~  387 (398)
                      ++..++
T Consensus       397 ~~~~k~  402 (403)
T d1wsta1         397 KEEMKR  402 (403)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            987653

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.1e-47  Score=356.50  Aligned_cols=371  Identities=24%  Similarity=0.360  Sum_probs=295.7

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCC--CcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHh
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~--~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +|++......+.++++.+. .+++++|+|+.|.|+..  |++.+.+++.+.+...  ...+|++..|.+++|++++++++
T Consensus        16 ~s~~~~~~~~s~ir~~~~~-~~~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   94 (420)
T d1vp4a_          16 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE   94 (420)
T ss_dssp             CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred             HhHHHHhCCCcHHHHHHHH-hCCCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHH
Confidence            4444445567888887665 47799999999987653  4555666666655432  24679999999999999999999


Q ss_pred             hhcCC---CCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890           83 QENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        83 ~~~~~---~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      +.+|+   ++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.++.+  .+++.++..+
T Consensus        95 ~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~--~~~~~l~~~~  171 (420)
T d1vp4a_          95 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL  171 (420)
T ss_dssp             HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred             HHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhcccc-cccccc--cccchhhhhh
Confidence            88764   58899999999999999999999999999999999999999999999999998 877665  4666665543


Q ss_pred             c-------cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc----ccCCcEEEEc
Q 015890          160 E-------TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC----VEGDHVVNLF  226 (398)
Q Consensus       160 ~-------~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~----~~~~~~i~~~  226 (398)
                      .       ......++++++|+||||.+++.+++++|+++|+++++++|+||+|  +.+++.....    ...+++++++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~  251 (420)
T d1vp4a_         172 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN  251 (420)
T ss_dssp             HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred             hhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEe
Confidence            2       1111245567799999999999999999999999999999999999  7776543322    2357788899


Q ss_pred             ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhc
Q 015890          227 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       227 s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      |++|.++ +|+|+||++++   +++++.+.+.......+.+...|.++...+....  +++++.++.++++++.+.+.|+
T Consensus       252 s~sk~~~-~G~RiG~~~~~---~~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~  327 (420)
T d1vp4a_         252 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE  327 (420)
T ss_dssp             ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-ccccccccccc---chhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhh
Confidence            9999885 99999999999   8999999888777778888999988888887532  4455666666666666555554


Q ss_pred             ----cCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC----CCeEEEEecCCCHHHHHHHHHH
Q 015890          305 ----PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADR  376 (398)
Q Consensus       305 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~  376 (398)
                          +.+++.+..|++++|+|+++++.. +..++++.| +++||.+.||+.|+.    .++||||++..+++++++++++
T Consensus       328 ~~~~~~~g~~~~~p~gg~f~~~~~~~~~-d~~~~~~~l-~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~e~l~~a~~r  405 (420)
T d1vp4a_         328 EYFSDIPGVKWVKSEGGLFIWLTLPEGF-DTWEMFEYA-KRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR  405 (420)
T ss_dssp             HHSTTSTTCEECCCSBSSEEEEECCTTC-CTTTTHHHH-HHHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred             hhhccCCCcEEecCCceEEEEEECCCCC-CHHHHHHHH-HHCCeEEEechhhCCCCCCCCEEEEEeCcCCHHHHHHHHHH
Confidence                555678888999999999998643 566677655 589999999998863    4699999987788999999999


Q ss_pred             HHHHHHHHhcc
Q 015890          377 LRRGLEELVKD  387 (398)
Q Consensus       377 l~~~~~~~~~~  387 (398)
                      |.++++++.++
T Consensus       406 L~~~l~~~~~~  416 (420)
T d1vp4a_         406 LREVVLEYGKE  416 (420)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHhhHh
Confidence            99999998764

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=3.1e-46  Score=352.25  Aligned_cols=364  Identities=21%  Similarity=0.320  Sum_probs=283.2

Q ss_pred             cCchHHHHHHHHHHc-------CCCeEEcCCccCCCCCcHHHHHHHHHhhcC-----------CCCCCCCCCCCcHHHHH
Q 015890           14 TEMPIMVQIQELVRG-------AKNAVSLAQGVVYWQPPKMAMEKVKELVWD-----------PSISKYGADEGLPELRD   75 (398)
Q Consensus        14 ~~~~~~~~~~~~~~~-------g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~~~~   75 (398)
                      .+.+++....+..++       -.++|+|+++.|.+. .+.+.+.+.+....           .....|++..|.+++|+
T Consensus        13 ~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~~en~l~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~   91 (431)
T d1m7ya_          13 QDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKK   91 (431)
T ss_dssp             --CHHHHHHHHHHHSBCCSSSCTTSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHH
T ss_pred             cCCchhhhhhhhhcCCCCCcCCCCcEEEeeccccccc-HHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHH
Confidence            346666555544432       234999999998874 55555555432110           01346989999999999


Q ss_pred             HHHHHHhhhcC----CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHh-cCcEEEEeccCCC-CCCC
Q 015890           76 ALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSS-KTLH  149 (398)
Q Consensus        76 ~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~  149 (398)
                      +++++++++++    +++++|++|+|++++++.++.+++++||+|+++.|+|+.+...++. .|++++.+ +.++ +++.
T Consensus        92 aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v-~~~~~~~~~  170 (431)
T d1m7ya_          92 AMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQ  170 (431)
T ss_dssp             HHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccc-cccchhccc
Confidence            99999998865    4688999999999999999999999999999999999998887764 57899988 7664 4688


Q ss_pred             CChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-------
Q 015890          150 PDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-------  216 (398)
Q Consensus       150 ~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-------  216 (398)
                      +|.+.+++.++    ....++++++++|+||||.+++.+++++|+++|+++|+++|+||+|  +.|++.....       
T Consensus       171 l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~  250 (431)
T d1m7ya_         171 ITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKD  250 (431)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTT
T ss_pred             ccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhh
Confidence            99999988775    2334689999999999999999999999999999999999999999  6665432211       


Q ss_pred             -------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC---CchHHH
Q 015890          217 -------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVT  286 (398)
Q Consensus       217 -------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~  286 (398)
                             ...+++++++|+||.||++|+|+||++.+   ++++......... ....+.+.+.++.+.+..   .++++.
T Consensus       251 ~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~---~~~i~~~~~~~~~-~~~~~~~~~~~~~a~l~~~~~~~~~~~  326 (431)
T d1m7ya_         251 RNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSN---DDMVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIA  326 (431)
T ss_dssp             TTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEES---CHHHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             cccccccccCceEEEEecCcccccCCCCccceeccc---hhhhHHHHHHHhc-cccccccccchhhhhhccchhhhhhhh
Confidence                   11357999999999999999999999998   4554433333322 344556666666666654   135677


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC-----CChHHHHHHHHHhcCeEEecCCCCCC--CCeEE
Q 015890          287 ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLR  359 (398)
Q Consensus       287 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iR  359 (398)
                      +.++.++++++.+.+.|++.+. .+..|++++|+|+++++..     .+..+++++|++++||.+.||+.|+.  ++++|
T Consensus       327 ~~~~~~~~~~~~l~~~L~~~gi-~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~R  405 (431)
T d1m7ya_         327 ENHKRLKQRQKKLVSGLQKSGI-SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFR  405 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTC-EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEE
T ss_pred             hhhhhhhhhhhhhhhhhhcCCc-EEecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEE
Confidence            7888888999999999988665 8888999999999997532     23557888999889999999998864  68999


Q ss_pred             EEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          360 ISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       360 i~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      |+++..+++++++++++|++++++.
T Consensus       406 i~~a~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         406 VCFANLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             EECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCcCCHHHHHHHHHHHHHHHHHh
Confidence            9998767889999999999998874

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=4e-43  Score=323.07  Aligned_cols=328  Identities=17%  Similarity=0.236  Sum_probs=268.1

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT  108 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~  108 (398)
                      ..+++||+.|.|++++|+.+++++.+....  ...| |+.+..++|+++++++    ++++++|++++|+++++..++..
T Consensus        21 p~~~idls~~~np~~~p~~~~~a~~~~~~~--~~~Y-p~~~~~~Lr~aia~~~----~v~~~~I~~~~g~~~~~~~~~~~   93 (355)
T d1lc5a_          21 PDQLLDFSANINPLGMPVSVKRALIDNLDC--IERY-PDADYFHLHQALARHH----QVPASWILAGNGETESIFTVASG   93 (355)
T ss_dssp             GGGSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSC-CCTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHHH
T ss_pred             hhheEEccCCCCCCCCCHHHHHHHHHHHHH--hccC-CCCChHHHHHHHHHHh----CCCHHHEEecccHHHHHHHHHhh
Confidence            346999999999999999999999998765  5668 6667789999999987    78899999999999999988776


Q ss_pred             hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015890          109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK  187 (398)
Q Consensus       109 l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~  187 (398)
                      +.  ++.+++..|.|..+.......+..+..+ +.+ ++++.++ +.+++.+.+++  ++|++++|+||||.+++.++++
T Consensus        94 ~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-~~~~~~~~~~~--~~v~l~nP~NPtG~~~~~e~l~  167 (355)
T d1lc5a_          94 LK--PRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQLT-DAILEALTPDL--DCLFLCTPNNPTGLLPERPLLQ  167 (355)
T ss_dssp             HC--CSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCC-TTHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHH
T ss_pred             hc--cccccccCCccceeccccccccccceee-eeeccCCccce-eeeeecccccc--ceeeeecccCcccccchhhhhh
Confidence            64  4567778899988888888899988888 765 3455555 55667776654  9999999999999999999999


Q ss_pred             HHHHHHHHcCCEEEEeece--eccCCCcc--ccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          188 RISDLCKAAGSWLVVDNTY--FMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       188 ~i~~l~~~~~~~livDe~~--~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      +|+++|+++++++|+||+|  +.+.+...  .....++++++.|+||.+|++|+|+||+++++  +.+.+.+.....  +
T Consensus       168 ~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~--~~~~~~~~~~~~--~  243 (355)
T d1lc5a_         168 AIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--DAAMARMRRQQM--P  243 (355)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--HHHHHHHHHHSC--T
T ss_pred             hhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccc--hhhhHHHHhhcC--C
Confidence            9999999999999999999  44443322  22345789999999999999999999999985  445566655443  5


Q ss_pred             CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      ++.+.+++.++..+++. ..++.+.++.++++++++.+.|.+++++.+. |.+++|+|++++.   ++.+++++|+ ++|
T Consensus       244 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~~~~f~~~~~~~---~~~~~~~~L~-~~g  317 (355)
T d1lc5a_         244 WSVNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCER---EDIDLQRRLL-TQR  317 (355)
T ss_dssp             TCSCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESC---TTCCHHHHHH-TTT
T ss_pred             ccccccccccccccccc-cchhHHHHHHHHHHHHHHHHHHhhcCCcEEC-CCCCEEEEEECCC---CHHHHHHHHH-HCC
Confidence            67889999999999985 6778888888999999999999998775655 5568999999875   4556777775 889


Q ss_pred             eEEecCCCCC--CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       344 i~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      |.|+|++.|.  .+++|||+++  +.+++++++++|++++
T Consensus       318 v~vr~~~~f~~~~~~~iRis~~--~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         318 ILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVL  355 (355)
T ss_dssp             EECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC
T ss_pred             cEEEeCccCCCCCCCEEEEEeC--CHHHHHHHHHHHHHhC
Confidence            9999998875  3689999997  4788888888888753

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.4e-42  Score=312.99  Aligned_cols=319  Identities=23%  Similarity=0.330  Sum_probs=260.1

Q ss_pred             HHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        24 ~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      ++...++++++|+.|.|++++|+.+.+++.+.+.......| +..|..++|+++++++++. ++++++|++|+|++++++
T Consensus        13 ~~~~~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~-~v~~d~I~it~G~~~~l~   90 (334)
T d2f8ja1          13 PYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIY   90 (334)
T ss_dssp             CCCCCCCCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS-SCCGGGEEEEEHHHHHHH
T ss_pred             cccccCCCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc-CCCcceEEecCcchhHHH
Confidence            33446899999999999999999999999999877644444 7789999999999998764 578899999999999998


Q ss_pred             HHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015890          104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE  183 (398)
Q Consensus       104 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~  183 (398)
                      .++..    ||+|+++.|+|..+...++..|++++.+ +.+++....+      ...++  ++++++++|+||||.+++.
T Consensus        91 ~l~~~----~d~v~i~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~------~~~~~--~~~l~l~nP~NPtG~~~s~  157 (334)
T d2f8ja1          91 VMMLM----FDRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKDLRIPE------VNVGE--GDVVFIPNPNNPTGHVFER  157 (334)
T ss_dssp             HHHHH----SSEEEECSSCCHHHHHHHHHHTCCEEEC-CCCTTSCCCC------CCCCT--TEEEEEESSCTTTCCCCCH
T ss_pred             HHhhh----ccccccccccccccccchhccCCccccc-cccccccccc------ccccc--ceEEEecccccccceeecH
Confidence            77654    6899999999999999999999999999 8876643221      12233  5999999999999999996


Q ss_pred             HHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015890          184 RLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN  261 (398)
Q Consensus       184 ~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~  261 (398)
                      +++.++    .++++++|+||+|  +.+..........+++++++|+||.++++|+|+||++++   +++++.+..... 
T Consensus       158 ~~l~~~----~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~---~~~i~~l~~~~~-  229 (334)
T d2f8ja1         158 EEIERI----LKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL-  229 (334)
T ss_dssp             HHHHHH----HTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTSSCTTTCEEEEEEC---HHHHHHHHHHSC-
T ss_pred             HHhhcc----ccceeEEeecccchhhcccccccccccCceEEEEecCccccchhhhhhhhcccc---hHHHHHHHHhhc-
Confidence            665543    4579999999999  444344444455788999999999999999999999999   899999987765 


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHh
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR  341 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  341 (398)
                       .++.+.+.+.++..++.. .++.++..+.+.++++.+.+.|+++|. ++.++. ++|+|+.++..  +..++.+.|+ +
T Consensus       230 -~~~~s~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-g~f~~~~~~~~--~~~~~~~~L~-~  302 (334)
T d2f8ja1         230 -PFNVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITDSR-GNFVFVFMEKE--EKERLLEHLR-T  302 (334)
T ss_dssp             -TTCSCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-EECCCC-SSEEEEECCHH--HHHHHHHHHH-H
T ss_pred             -ccccchhhhhhccccccc-ccchhhHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCCC--CHHHHHHHHH-H
Confidence             566788889888888875 678888889999999999999999875 777776 56888888753  5667777775 7


Q ss_pred             cCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR  379 (398)
Q Consensus       342 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~  379 (398)
                      +||.++++     +++||||++  +.+|+++++++|++
T Consensus       303 ~GI~vr~~-----~~~vRis~g--~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         303 KNVAVRSF-----REGVRITIG--KREENDMILRELEV  333 (334)
T ss_dssp             TTEECEEE-----TTEEEEECC--CHHHHHHHHHHHHH
T ss_pred             CCCEECCC-----CCeEEEEcC--CHHHHHHHHHHHhc
Confidence            89999863     689999998  46778888777764

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.4e-42  Score=313.52  Aligned_cols=320  Identities=22%  Similarity=0.318  Sum_probs=259.1

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      ++++.+.|+.|.+++++++.+.+        .....| |+....++|+++++++    |+++++|++|+|+++++..++.
T Consensus        25 ~~~~~i~L~~ne~p~~~~~~~~~--------~~l~rY-Pd~~~~~Lr~~ia~~~----gv~pe~I~it~Gs~eai~~~~~   91 (354)
T d1fg7a_          25 GGNGDVWLNANEYPTAVEFQLTQ--------QTLNRY-PECQPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIR   91 (354)
T ss_dssp             TTTCSEECSSCCCSSCCCCCCCC--------CCTTSC-CCSSCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHH
T ss_pred             CCCCCEEeeCCCCCCCCCHHHHH--------HHHhcC-CCCcHHHHHHHHHHHh----CCChHHeeeccCchHHHHHHHH
Confidence            35678999999999887765433        235678 6667789999999987    7999999999999999999999


Q ss_pred             HhccCCC-EEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015890          108 TLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL  186 (398)
Q Consensus       108 ~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  186 (398)
                      +++++|| .|+++.|+|..+...++..|.+++.+ +.+ +++.+|++.++..++ +  +++|++++||||||.+++.+++
T Consensus        92 ~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~-~~~-~~~~~d~~~l~~~~~-~--~~~v~~~~pnNPtG~~~~~~~~  166 (354)
T d1fg7a_          92 AFCEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTL-DNWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDF  166 (354)
T ss_dssp             HHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCC-TTSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHH
T ss_pred             HhhccccccccccccccccchhhhhccCceeecc-ccc-cccccchhhhhhccc-c--cceeeccCCCccceeEeeeccc
Confidence            9999998 58889999999999999999999988 665 467899999988774 2  5999999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEeece--eccCCC-ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015890          187 KRISDLCKAAGSWLVVDNTY--FMYDGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP  263 (398)
Q Consensus       187 ~~i~~l~~~~~~~livDe~~--~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~  263 (398)
                      +.+.+.++ ++.++|+||+|  |.++.. .......+++++++|+||.||++|+|+||++++   +++++.+.+...  .
T Consensus       167 ~~~~~~~~-~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~---~~~i~~l~~~~~--~  240 (354)
T d1fg7a_         167 RTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--P  240 (354)
T ss_dssp             HHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--S
T ss_pred             cccccccc-ccccccccccchhhccccccchhhcccccceEEeCCccccCCCcccccccccc---chhhhhhhhhcC--c
Confidence            98888776 57788888888  443322 223334678999999999999999999999999   899999887765  5


Q ss_pred             CCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhc
Q 015890          264 ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH  342 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  342 (398)
                      ++.+.+.+.++..++.. ...+.....+.+.+.++.+.+.+.++++.....|.+++|+|++++    ++.++++.|+ ++
T Consensus       241 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~----~~~~~~~~L~-~~  315 (354)
T d1fg7a_         241 YPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLW-DQ  315 (354)
T ss_dssp             SCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHHH-HT
T ss_pred             cchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC----CHHHHHHHHH-HC
Confidence            66677777777766654 124456666778888889999998888755555677999999987    4677888775 88


Q ss_pred             CeEEecCCCC-CCCCeEEEEecCCCHHHHHHHHHHHH
Q 015890          343 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLR  378 (398)
Q Consensus       343 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~  378 (398)
                      ||.|++++.| +.++++|||++  +.+++++++++|+
T Consensus       316 gIlvr~~~~~~~~~~~lRisig--t~ee~~~~l~aLk  350 (354)
T d1fg7a_         316 GIILRDQNKQPSLSGCLRITVG--TREESQRVIDALR  350 (354)
T ss_dssp             TEECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHH
T ss_pred             CcEEecCCCCCCCCCEEEEEeC--CHHHHHHHHHHHh
Confidence            9999998876 56899999997  4677777777765

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=7e-41  Score=312.77  Aligned_cols=351  Identities=15%  Similarity=0.120  Sum_probs=268.9

Q ss_pred             chHHHHHHHHHHc--CCCeEEcCCcc---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC-
Q 015890           16 MPIMVQIQELVRG--AKNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-   87 (398)
Q Consensus        16 ~~~~~~~~~~~~~--g~~~~~l~~g~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~-   87 (398)
                      ...++.+.+.+..  ..+.|||+.|.   +..  ++.+.|.+++.+...++..++|++..|.+++|+++++++.+.++. 
T Consensus        12 ~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~   91 (401)
T d7aata_          12 PDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEA   91 (401)
T ss_dssp             CCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHH
T ss_pred             CChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCcc
Confidence            3444444443322  34579999994   222  345889999888877766678999999999999999999887753 


Q ss_pred             -CCCcEEEecChH-----HHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhc
Q 015890           88 -YKSSVMVTAGAN-----QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLE  160 (398)
Q Consensus        88 -~~~~v~~~~g~t-----~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~  160 (398)
                       ++++++.+.++.     .++..++++++++||+|++++|+|++|...++..|++++.+ +.. ++++.++.+.+.+.+.
T Consensus        92 ~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  170 (401)
T d7aata_          92 FKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDIS  170 (401)
T ss_dssp             HHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHT
T ss_pred             cCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEE-eccccccccccHHHHHHHHh
Confidence             466666654432     46777888899999999999999999999999999999999 764 4567789998888875


Q ss_pred             c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcccc-------ccCCcEEEEccccc
Q 015890          161 T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCC-------VEGDHVVNLFSFSK  230 (398)
Q Consensus       161 ~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~-------~~~~~~i~~~s~sK  230 (398)
                      . .+..+++++++||||||.+++.+++++|+++|++|++++|.||+|  +.|++.....       ...++++++.|+||
T Consensus       171 ~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk  250 (401)
T d7aata_         171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK  250 (401)
T ss_dssp             TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred             cCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccc
Confidence            2 223588999999999999999999999999999999999999999  7776532211       12456788899999


Q ss_pred             ccCCCcceeEEEEccCCcHHHHHHHH----HhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHH
Q 015890          231 AYGMMGWRVGYIAYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       231 ~~~~~G~r~G~i~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~  300 (398)
                      .++++|+|+||++++....+...++.    ........+.+...|.++...+...      ..+++.+++.+.++++.+.
T Consensus       251 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~  330 (401)
T d7aata_         251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV  330 (401)
T ss_dssp             TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998853322222221    1222334567788888888888752      1345667777888899999


Q ss_pred             HHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHH
Q 015890          301 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL  377 (398)
Q Consensus       301 ~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l  377 (398)
                      +.|++++.   +.+..+++|+|+|+.++      .+++++|++++||++.||+        |||++..++++++.+.++|
T Consensus       331 ~~L~~~~~~~~~~~~~~~~G~F~~~~ls------~e~~~~L~~e~gV~~~pg~--------Ris~a~~~~~~i~~la~ai  396 (401)
T d7aata_         331 SNLKKEGSSHNWQHITDQIGMFCFTGLK------PEQVERLTKEFSIYMTKDG--------RISVAGVASSNVGYLAHAI  396 (401)
T ss_dssp             HHHHHTTCCSCCHHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHH
T ss_pred             HHHHHhCCCCCcceECCCCeEEEecCCC------HHHHHHHHHhCCEEECCCc--------EEEeccCCHHHHHHHHHHH
Confidence            99988654   34567888999997663      4678889999999999974        9999887888888888888


Q ss_pred             HHHH
Q 015890          378 RRGL  381 (398)
Q Consensus       378 ~~~~  381 (398)
                      .+++
T Consensus       397 ~~v~  400 (401)
T d7aata_         397 HQVT  400 (401)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7765

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=4.2e-39  Score=301.38  Aligned_cols=360  Identities=18%  Similarity=0.163  Sum_probs=267.9

Q ss_pred             HhhccCchHHHHHHHHHHcC--CCeEEcCCcc---CCC--CCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHH
Q 015890           10 RALETEMPIMVQIQELVRGA--KNAVSLAQGV---VYW--QPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKL   81 (398)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~g--~~~~~l~~g~---~~~--~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~l   81 (398)
                      +++..+...+..+.+.+++.  .+.|||+.|.   +..  ++.|.|.+|......+ ...++|++..|.+++|+++++++
T Consensus         7 ~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~   86 (412)
T d1yaaa_           7 NIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKII   86 (412)
T ss_dssp             TCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHH
T ss_pred             cCCcCCCChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHH
Confidence            46666655566766666543  3479999993   322  2457888876554433 33568999999999999999999


Q ss_pred             hhhcCC--CCCcEEEe--cChHHHHHHHH--HHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCCChHH
Q 015890           82 NQENKL--YKSSVMVT--AGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADW  154 (398)
Q Consensus        82 ~~~~~~--~~~~v~~~--~g~t~a~~~~~--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~  154 (398)
                      .+.++.  ..+.++.+  .|++.++..++  ..+..+||.|++++|+|+.+...++..|.+++.+ +. +++++.++.+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~  165 (412)
T d1yaaa_          87 FGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLDLNG  165 (412)
T ss_dssp             HCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEECHHH
T ss_pred             hcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecc-cccccccccccchh
Confidence            877653  23333332  34444444333  3346799999999999999999999999999988 65 34557788888


Q ss_pred             HHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc----------cccCCc
Q 015890          155 LEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC----------CVEGDH  221 (398)
Q Consensus       155 l~~~l~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~----------~~~~~~  221 (398)
                      +++.+...+ ..+++++++||||||.+++.+++++|+++|+++++++|+||+|  +.+++....          ....++
T Consensus       166 ~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~  245 (412)
T d1yaaa_         166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSP  245 (412)
T ss_dssp             HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCC
T ss_pred             hhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCC
Confidence            888876322 2467888899999999999999999999999999999999999  777653221          123577


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHH----HHH----HHHHhhccCCCCcchHHHHHHHHHhcCC------chHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEG----FAT----QLLKVQDNIPICASIISQHLALYSLQTG------PEWVTE  287 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~----~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~  287 (398)
                      ++++.|+||.++++|+|+||++++.....    ..+    ...........+.+...|.++..++...      ..+++.
T Consensus       246 ~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~  325 (412)
T d1yaaa_         246 VFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVT  325 (412)
T ss_dssp             EEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             eEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHH
Confidence            89999999999999999999998853211    111    1222233456778899999988888752      234567


Q ss_pred             HHHHHHHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC
Q 015890          288 RVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG  364 (398)
Q Consensus       288 ~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  364 (398)
                      +++.++++++.+.+.|++++.   +.++.+++|+|.|+.+.      .+++++|++++||++.||+        ||+++.
T Consensus       326 ~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls------~e~~~~L~~e~~V~~~~g~--------Ris~~g  391 (412)
T d1yaaa_         326 MSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT------PQMVKRLEETHAVYLVASG--------RASIAG  391 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTS--------EEEGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecCcC------HHHHHHHHHhCCEEECCCC--------EEEecc
Confidence            778888889999999987654   45667888999997663      4678889999999998874        999987


Q ss_pred             CCHHHHHHHHHHHHHHHHHH
Q 015890          365 LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       365 ~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+++.++.+.++|.++++.+
T Consensus       392 ~~~~~i~~l~~ai~~v~k~~  411 (412)
T d1yaaa_         392 LNQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             CCTTTHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHhh
Confidence            77888999999998887753

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=9.8e-39  Score=299.21  Aligned_cols=360  Identities=16%  Similarity=0.158  Sum_probs=263.9

Q ss_pred             hhccCchHHHHHHHHHHc--CCCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHh
Q 015890           11 ALETEMPIMVQIQELVRG--AKNAVSLAQGV---VY--WQPPKMAMEKVKELVWDP-SISKYGADEGLPELRDALVKKLN   82 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~--g~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~~~~~l~~~l~   82 (398)
                      +...+...++.+...+.+  ..+.|||+.|.   +.  .++.|.|.++......+. ..++|++..|.+++|+++++++.
T Consensus         9 ~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~~~   88 (412)
T d1ajsa_           9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLAL   88 (412)
T ss_dssp             CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCcCCCChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHHHh
Confidence            333333445555555544  34679999993   22  234578888876655433 35679999999999999999998


Q ss_pred             hhcCC--CCCc--EEEecChHHHHHHHHHH-------hccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC-CCCCCCC
Q 015890           83 QENKL--YKSS--VMVTAGANQAFVNIVLT-------LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP  150 (398)
Q Consensus        83 ~~~~~--~~~~--v~~~~g~t~a~~~~~~~-------l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  150 (398)
                      +..+.  ..++  ++.+.+++.++..+...       ++++||+|++++|+|++|...++..|++++.+.+. +++++.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~  168 (412)
T d1ajsa_          89 GDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGL  168 (412)
T ss_dssp             CTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEE
T ss_pred             ccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccc
Confidence            76653  3444  44556666555554444       36899999999999999999999999875544133 3445667


Q ss_pred             ChHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCcc-------ccccCC
Q 015890          151 DADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKH-------CCVEGD  220 (398)
Q Consensus       151 d~e~l~~~l~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~-------~~~~~~  220 (398)
                      |.+.+++.+.. .+..+++++++||||||.+++.+++++|+++|++||+++|.||+|  +.|++...       .....+
T Consensus       169 d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~  248 (412)
T d1ajsa_         169 DLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGF  248 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcc
Confidence            88887777642 222488888899999999999999999999999999999999999  67665321       112346


Q ss_pred             cEEEEcccccccCCCcceeEEEEccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHH
Q 015890          221 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVK  290 (398)
Q Consensus       221 ~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~  290 (398)
                      .++++.|+||.++++|+|+||++++....+....+    .........+.+.+.+.++...+...      ..+++..++
T Consensus       249 ~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (412)
T d1ajsa_         249 ELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMAD  328 (412)
T ss_dssp             CEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            78889999999999999999999885332222222    22233345667788888887777641      234566777


Q ss_pred             HHHHHHHHHHHHhccCCC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCH
Q 015890          291 DLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE  367 (398)
Q Consensus       291 ~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~  367 (398)
                      .+.++++.+.+.|++++.   +.++.+++|+|.|+.+.      .+++.+|++++||++.||+        ||+++..++
T Consensus       329 ~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls------~~~v~~L~~e~gV~~vpg~--------Ri~~ag~~~  394 (412)
T d1ajsa_         329 RILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPSG--------RINMCGLTT  394 (412)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTTS--------EEEGGGCCT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCCC------HHHHHHHHHhCCEEEeCCC--------eEEeccCCH
Confidence            888889999999988764   34456777999886653      3667889899999999974        999987788


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 015890          368 DDCKAAADRLRRGLEEL  384 (398)
Q Consensus       368 ~~~~~~~~~l~~~~~~~  384 (398)
                      ++++.++++|.++++++
T Consensus       395 ~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         395 KNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             TTHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999998875

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-39  Score=302.05  Aligned_cols=337  Identities=16%  Similarity=0.152  Sum_probs=253.5

Q ss_pred             CCeEEcCCcc---CC--CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCc--EEEecChHH
Q 015890           30 KNAVSLAQGV---VY--WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS--VMVTAGANQ  100 (398)
Q Consensus        30 ~~~~~l~~g~---~~--~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~--v~~~~g~t~  100 (398)
                      .+.|||+.|.   +.  .+++|.|.+|+.+...++..++|++..|.+++|+++++++.+.++.  .++.  ++.+.+++.
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (396)
T d2q7wa1          26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             CCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCcccccceeeeccchHHH
Confidence            4579999993   22  3456899999888877666778999999999999999999887754  2333  345566655


Q ss_pred             HHHHHHH--HhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015890          101 AFVNIVL--TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~-~~~~~~v~i~~p~np  176 (398)
                      ++..++.  ...++||.|++++|+|+++...++..|++++.+ +.. ++++..+.+.+++.... ..+.+++++++|+||
T Consensus       106 ~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P~NP  184 (396)
T d2q7wa1         106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP  184 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             HHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEec-ccccccccccccchHHHHHHHhccCcEEEEecCCcCC
Confidence            5555444  346899999999999999999999999999988 654 44555677777666542 233578888899999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc------cccCCcEEEEcccccccCCCcceeEEEEccCCc
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV  248 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~------~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~  248 (398)
                      ||.+++.+++++|+++|++|++++|+||+|  +.+++....      ....++.+++.|+||.++++|+|+||++++...
T Consensus       185 TG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~  264 (396)
T d2q7wa1         185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAAD  264 (396)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred             cCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchhH
Confidence            999999999999999999999999999999  666543221      113567888899999999999999999998532


Q ss_pred             HHHHHHHHH----hhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCCC---CccccCC
Q 015890          249 EGFATQLLK----VQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLGE---GAVKGGE  315 (398)
Q Consensus       249 ~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~  315 (398)
                      .+.......    .......+.+...+.++...+...      .++++++++.++++++.+.+.|++++.   +.++.++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~  344 (396)
T d2q7wa1         265 SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQ  344 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHC
T ss_pred             HHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCC
Confidence            222222211    122344567788888877777641      245667777888899999999988764   3455677


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      +|+|.|+.++      .+++++|++++||++.||+        ||+++..++++++.++++|.+++
T Consensus       345 ~G~F~~~~l~------~e~~~~L~~e~gV~~~~g~--------Ri~~a~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         345 NGMFSFSGLT------KEQVLRLREEFGVYAVASG--------RVNVAGMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             CSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHHC
T ss_pred             CeEEEeeCCC------HHHHHHHHHhCCEEECCCC--------EEEecCCCHHHHHHHHHHHHHhC
Confidence            7999997764      3678889999999998875        99998877888999888887753

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-39  Score=302.86  Aligned_cols=336  Identities=19%  Similarity=0.130  Sum_probs=256.2

Q ss_pred             CCeEEcCCcc---CCC--CCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHH
Q 015890           30 KNAVSLAQGV---VYW--QPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQA  101 (398)
Q Consensus        30 ~~~~~l~~g~---~~~--~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a  101 (398)
                      .+.|||+.|.   +..  +.++.|.+|....... ...+.|++..|.+++|+++++++.+.++.  ++++++.+.+++.+
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~i~~~~~~~~~  105 (397)
T d3tata_          26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS  105 (397)
T ss_dssp             SSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHTTCEEECCBSHHH
T ss_pred             CCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhhccCCcCCcCcEEEecCchhH
Confidence            4569999994   322  3457888887655433 33567999999999999999999887764  47788877666553


Q ss_pred             ----HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCC-CCCCChHHHHHhhcc-CCCCeEEEEeCCCC
Q 015890          102 ----FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLET-KPTPKLVSVVNPGN  175 (398)
Q Consensus       102 ----~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~l~~-~~~~~~v~i~~p~n  175 (398)
                          +..++..++.+||+|++++|+|+++...++..|.+++.+ +.+.+ ++.+|.+.+.+.+.. ....+++++++|||
T Consensus       106 ~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~N  184 (397)
T d3tata_         106 GALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHN  184 (397)
T ss_dssp             HHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEEC-CCCCTTTSSCCHHHHHHHHTTCCSSCCCEECSSSCS
T ss_pred             HHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEE-ecchhhccccchHHHHHHhhhcccccEEEEecCCCC
Confidence                556666678999999999999999999999999999999 77544 467788888777662 22357888889999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc------cccCCcEEEEcccccccCCCcceeEEEEccCC
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE  247 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~------~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~  247 (398)
                      |||.+++.+++++|+++|+++++++|.||+|  +.|++....      ....++++++.|+||.++++|+|+||++++..
T Consensus       185 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~  264 (397)
T d3tata_         185 PTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCE  264 (397)
T ss_dssp             SSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHTBTTTCCBCCEEECS
T ss_pred             CCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCcccccccCccccccccchh
Confidence            9999999999999999999999999999999  666542211      12346789999999999999999999988753


Q ss_pred             cHHHHHH----HHHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccCCC---CccccC
Q 015890          248 VEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLGE---GAVKGG  314 (398)
Q Consensus       248 ~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~  314 (398)
                      ..+...+    +.........+.+...|.++...+...      .++++.++++++++++.+.+.|...+.   +.+..+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~  344 (397)
T d3tata_         265 DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLN  344 (397)
T ss_dssp             STTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCTTSCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcC
Confidence            3222222    222333445667788888887777651      123455566677777888888877542   455678


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      ++|+|+|+.++      .+++++|++++||++.||+        ||+++..+++++++++++|.++
T Consensus       345 ~~G~F~~~~ls------~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~~~i~~~~~ai~~v  396 (397)
T d3tata_         345 QRGMFSYTGLS------AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             CCSSBCCCCCC------HHHHHHHTTTTCEECCSSS--------CCBTTSCCTTTHHHHHHHHHHH
T ss_pred             CCceEEecCcC------HHHHHHHHHhCCEEeCCCC--------EEEeccCCHHHHHHHHHHHHHh
Confidence            88999998764      3678889989999999974        9999887889999888888765

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=3.1e-37  Score=287.50  Aligned_cols=349  Identities=14%  Similarity=0.134  Sum_probs=254.7

Q ss_pred             hHHHHHHHHHH-c-CCCeEEcCCcc-----CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-
Q 015890           17 PIMVQIQELVR-G-AKNAVSLAQGV-----VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-   88 (398)
Q Consensus        17 ~~~~~~~~~~~-~-g~~~~~l~~g~-----~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-   88 (398)
                      ..+..+.+.++ + ..+.|||+.|.     ...+++|.|.+|+.+...+...++|++..|.+++|+++++++.+..+.. 
T Consensus        11 d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~   90 (394)
T d2ay1a_          11 DKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSE   90 (394)
T ss_dssp             CSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGG
T ss_pred             ChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccccccc
Confidence            33444444333 2 24579999994     2224568999999888776556789999999999999999998776543 


Q ss_pred             CCcEEEecChHHH--HHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCC-CCCCCCChHHHHHhhcc-CCC
Q 015890           89 KSSVMVTAGANQA--FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPT  164 (398)
Q Consensus        89 ~~~v~~~~g~t~a--~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~l~~-~~~  164 (398)
                      ....+++.|++.+  +...+..+.++||.|++++|+|+.|...++..|.+++.+ +.. +.++..+.+.+++.... .+.
T Consensus        91 ~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~  169 (394)
T d2ay1a_          91 TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADLAAAKKG  169 (394)
T ss_dssp             GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHHHTCCTT
T ss_pred             cccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEe-cccchhcccccchhHHHHHhhcccC
Confidence            2333344444344  555566677999999999999999999999999999988 653 34455677777666652 222


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccc------cccCCcEEEEcccccccCCCc
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHC------CVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~------~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      .+++++++||||||.+++.+++++|+++|+++++++|.||+|  +.|++....      .......+++.|+||.++.+|
T Consensus       170 ~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G  249 (394)
T d2ay1a_         170 DMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYR  249 (394)
T ss_dssp             CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGG
T ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccccccccccCCc
Confidence            467777799999999999999999999999999999999999  666543211      112456788899999999999


Q ss_pred             ceeEEEEccCCcHHHHHHH----HHhhccCCCCcchHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHHHHHhccC
Q 015890          237 WRVGYIAYPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPL  306 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~  306 (398)
                      +|+||++++....+....+    .........+.+...+..+...+...      .++++.+++++.++++.+.+.|+++
T Consensus       250 ~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  329 (394)
T d2ay1a_         250 ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL  329 (394)
T ss_dssp             GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998885332222222    22223334566677777776666541      2345666777888888899988875


Q ss_pred             CC---CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 015890          307 GE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG  380 (398)
Q Consensus       307 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~  380 (398)
                      +.   +.+..+++|+|+|+.+.      .+++++|++++||++.||.        ||+++..++++++.+.++|.++
T Consensus       330 ~~~~~~~~~~~~~G~F~~~~ls------~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         330 SGSDRFGFVAEHRGMFSRLGAT------PEQVKRIKEEFGIYMVGDS--------RINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             HTSSTTTHHHHCCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCCceeeECCCceeEEecCcC------HHHHHHHHHhCCEEecCCC--------EEEecCCCHHHHHHHHHHHHHh
Confidence            43   35567888999998764      4678889999999999974        9999887888888877777653

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=4.3e-36  Score=278.48  Aligned_cols=324  Identities=17%  Similarity=0.131  Sum_probs=243.4

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhc-CC-CCCCCCCCC----CcHHHHHHHHHHHhhhcCC--CCCcEEEecChHHH
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-DP-SISKYGADE----GLPELRDALVKKLNQENKL--YKSSVMVTAGANQA  101 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~-~~-~~~~y~~~~----~~~~~~~~l~~~l~~~~~~--~~~~v~~~~g~t~a  101 (398)
                      ...+|++.|+|.+..|-....+...+.. .+ ...+|....    -.++|++.|++......+.  +..+|++++|++++
T Consensus        56 ~~~~~~~~gdp~~~~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gstel  135 (425)
T d2hoxa1          56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL  135 (425)
T ss_dssp             TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred             CceeeCCCCCCCCCCHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHH
Confidence            4578899998877533344444444432 22 123354332    2378999999977655553  45579999999999


Q ss_pred             HHHHHHHh--------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCC
Q 015890          102 FVNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP  173 (398)
Q Consensus       102 ~~~~~~~l--------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p  173 (398)
                      +++++.+|        ..+||+|+++.|+|..|....+..+.+...        |.+|.+.+++.+++++  +++++++|
T Consensus       136 i~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~--------~~~D~~~~~~~~~~~~--~ii~l~sP  205 (425)
T d2hoxa1         136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQ--YIEMVTSP  205 (425)
T ss_dssp             HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGG--EEEEEESS
T ss_pred             HHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc--------cCCCHHHHHhhCCCCc--eEEEEECC
Confidence            99999999        468899999999999999988888765443        3557788888877765  99999999


Q ss_pred             CCCCccCCCHHHHHHHHHHHHHcCCEEEEeecee--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHH
Q 015890          174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYF--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF  251 (398)
Q Consensus       174 ~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~  251 (398)
                      |||||.+..          +..+++.+|.||+|.  .+..   .....+++++++|+||.||++|+|+||+++++  +.+
T Consensus       206 nNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~~---~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~--~~i  270 (425)
T d2hoxa1         206 NNPEGLLRH----------AVIKGCKSIYDMVYYWPHYTP---IKYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESV  270 (425)
T ss_dssp             CTTTCCCCC----------CSSTTCEEEEECTTCSTTTSC---CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHH
T ss_pred             CCCCcchhh----------hhhhCCEEEEeccccCccccc---hhhhcCCeEEEEeCHHhccCcchheeeEEeCC--HHH
Confidence            999998732          123689999999993  2222   22335678999999999999999999987775  778


Q ss_pred             HHHHHHhhccCCCCcchHHHHHHHHHhcC-----------CchHHHHHHHHHHHHHHHHHHHhccCCCCcc---------
Q 015890          252 ATQLLKVQDNIPICASIISQHLALYSLQT-----------GPEWVTERVKDLVRNREIIREALSPLGEGAV---------  311 (398)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---------  311 (398)
                      ++.+.........+++.+.|.++.++|+.           ..++++..++.++++++++.+.|++.+....         
T Consensus       271 ~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~  350 (425)
T d2hoxa1         271 YNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYC  350 (425)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEE
T ss_pred             HHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccce
Confidence            88888877777889999999998888853           1245667778888889999999987654211         


Q ss_pred             -----ccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          312 -----KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       312 -----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                           ..+..+.|.|++....   ..+++.++++++||.++||+.|+. ++++|||+.. +++++++++++|+++++
T Consensus       351 ~f~~~~~~~~~~f~wl~~~~~---~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~-~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         351 NYFRRMRPPSPSYAWVKCEWE---EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             TTTTEEECCCCSEEEEEECSG---GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHT
T ss_pred             eeeeeccCCCcceeeeeCCCC---hHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence                 1233356788887542   334456677899999999999974 6899999986 88899999999999875

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.6e-29  Score=231.21  Aligned_cols=351  Identities=14%  Similarity=0.118  Sum_probs=251.2

Q ss_pred             chHHHHHHHHHHc---CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHhhhcCCC
Q 015890           16 MPIMVQIQELVRG---AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY   88 (398)
Q Consensus        16 ~~~~~~~~~~~~~---g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~~~~~~~~~l~~~l~~~~~~~   88 (398)
                      ...+|+.++.+.+   +++++.|+.+... +.|+.+++++.+.+.+....    .|.......+..+..++.+.+..+..
T Consensus         4 ~~~vR~~FP~l~~~~~~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~   82 (405)
T d1jf9a_           4 VDKVRADFPVLSREVNGLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR   82 (405)
T ss_dssp             HHHHHHTCGGGGCEETTEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHhChhcccCcCCCCeEEEeCcccc-CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            3445665555553   4567888877654 56899999998877542111    11111111233334444444445754


Q ss_pred             -CCcEEEecChHHHHHHHHHHh----ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890           89 -KSSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        89 -~~~v~~~~g~t~a~~~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                       ++++++++|+|++++.++.++    ..+||+|++....|++..    ..++..|+++..+ |.++++ .+|++.+++++
T Consensus        83 ~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~-~~~~~g-~~~~~~~~~~i  160 (405)
T d1jf9a_          83 SAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPDG-TLQLETLPTLF  160 (405)
T ss_dssp             CGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTTS-CBCGGGHHHHC
T ss_pred             CcccccccCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEE-CCCCCC-cCCHHHHHHhc
Confidence             589999999999999888763    478999999999998744    4456779999999 888765 68999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcce
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      ++++  ++|++++.+|.||.++|   +++|+++|+++|+++++|.++ .+.........  +.++++.|.+|++|++|  
T Consensus       161 ~~~t--~lv~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~--~~D~~~~s~hK~~Gp~G--  231 (405)
T d1jf9a_         161 DEKT--RLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL--DCDFYVFSGHKLYGPTG--  231 (405)
T ss_dssp             CTTE--EEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH--TCSEEEEEGGGTTSCSS--
T ss_pred             cCCc--EEEEEecCCCcccccCc---hHHhhhHHHHcCCeeecccceeccccccchhhc--CCceeeccccccccCCC--
Confidence            9876  99999999999999999   999999999999999999999 66543333222  34488999999998666  


Q ss_pred             eEEEEccCCcHHHHHHHHHhh----------------------ccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHH
Q 015890          239 VGYIAYPSEVEGFATQLLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRN  295 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~  295 (398)
                      +|+++.+   ++..+.+....                      .....+.+.+...++..+++...+ ..++..++...+
T Consensus       232 ~g~l~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L  308 (405)
T d1jf9a_         232 IGILYVK---EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNL  308 (405)
T ss_dssp             CEEEEEC---HHHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             ceeeeec---hhhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            6888888   66655432211                      012346788888888888875222 245566666777


Q ss_pred             HHHHHHHhccCCCCccccCCc-cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC--------CCCCeEEEEecC-C
Q 015890          296 REIIREALSPLGEGAVKGGEG-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-L  365 (398)
Q Consensus       296 ~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~iRi~~~~-~  365 (398)
                      .+.+.+.++..+......+.. ...+.+.++.  .+..++...| .++||.++.|+.|        +.++.+|||++. .
T Consensus       309 ~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~--~~~~~~~~~L-~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~yn  385 (405)
T d1jf9a_         309 MHYALSQLESVPDLTLYGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN  385 (405)
T ss_dssp             HHHHHHHHTTSTTEEEESCTTCCSEEEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC
T ss_pred             HHHHHhhhhcCCcccccCCcCcCcEEEEEcCC--CCHHHHHHHH-HHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCC
Confidence            788888888887755554432 2344456653  3566676655 6899999998876        346789999999 8


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 015890          366 VEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       366 ~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+|+++++++|+++.+-+
T Consensus       386 t~eDid~l~~~l~~i~r~~  404 (405)
T d1jf9a_         386 THEEVDRLVTGLQRIHRLL  404 (405)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhc
Confidence            9999999999998887643

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.9e-28  Score=227.45  Aligned_cols=333  Identities=15%  Similarity=0.138  Sum_probs=226.7

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCC-CC-CCc------HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHH
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-AD-EGL------PELRDALVKKLNQENKLYKSSVMVTAGANQAFVN  104 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~-~~~------~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~  104 (398)
                      |.|+.+.. .++++.++++|.+.+.+..  .|+ +. ...      .+..+.+++.++++.|+++++|++++|+|++++.
T Consensus         4 iYlD~aa~-~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~   80 (391)
T d1p3wa_           4 IYLDYSAT-TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL   80 (391)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred             EEeeCccc-cCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHH
Confidence            45555543 3579999999999886532  222 21 111      2223333334444448999999999999999999


Q ss_pred             HHHHhc----cCCCEEEEeCCCCcChhhH---HHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCC
Q 015890          105 IVLTLC----DAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       105 ~~~~l~----~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~npt  177 (398)
                      ++.++.    ++||+|++.++.|++....   ++..|+++..+ +.+.++ .+|++.+++++++++  ++|++++++|||
T Consensus        81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~~-~~d~~~~~~~i~~~T--~lv~is~~~n~t  156 (391)
T d1p3wa_          81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQRNG-IIDLKELEAAMRDDT--ILVSIMHVNNEI  156 (391)
T ss_dssp             HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCTTS-CCCHHHHHHHCCTTE--EEEECCSBCTTT
T ss_pred             HHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEe-CCCCCC-eEcHHHHHHhCCCCc--EEEEEECCCCCC
Confidence            988753    7899999999999876543   34569999999 777654 589999999999876  999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      |.++|   +++|+++|+++|+++++|++| ++.........  +.++++.|.+|++|.+|  +|+++.+.   +......
T Consensus       157 G~~~~---~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~--~~D~~~~s~~k~~g~~g--~g~~~~~~---~~~~~~~  226 (391)
T d1p3wa_         157 GVVQD---IAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL--KVDLMSFSGHKIYGPKG--IGALYVRR---KPRVRIE  226 (391)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTS--CCSEEEEESTTTTSCSS--CEEEEECB---TTBCCCC
T ss_pred             eeECC---HHHHHHHhccCCcEEEEeeccccCCccccchhc--cccccccccccccCCCc--eEEEEEec---chhcccC
Confidence            99999   889999999999999999999 66543333332  33477889999998666  57777663   2222221


Q ss_pred             Hhh-------ccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC--C-ccEEEEeeCCC
Q 015890          257 KVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--E-GAIYLWARLPE  326 (398)
Q Consensus       257 ~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~-~~~~~~~~~~~  326 (398)
                      ...       .....+.+.+...++...++...+...+..+++++....+.+.|.+++...+...  . ....+.+.++.
T Consensus       227 ~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (391)
T d1p3wa_         227 AQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNY  306 (391)
T ss_dssp             CSSCSSCTTTTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETT
T ss_pred             CcccCCccccCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeCC
Confidence            111       1122334444444444444432344455566777788888898988776333221  1 12233334443


Q ss_pred             CCCChHHHHHHHHHhcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          327 KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       327 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                        .+...+...|   +++.++.|..|..                   .++||||++. +|++|++++++.|++++.++.+
T Consensus       307 --~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~  381 (391)
T d1p3wa_         307 --VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD  381 (391)
T ss_dssp             --SCHHHHHHHT---TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CChHHHHHHh---CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              2466666544   4787877765521                   2579999998 7899999999999999998765


Q ss_pred             c
Q 015890          387 D  387 (398)
Q Consensus       387 ~  387 (398)
                      .
T Consensus       382 ~  382 (391)
T d1p3wa_         382 L  382 (391)
T ss_dssp             S
T ss_pred             h
Confidence            3

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=6.6e-29  Score=227.85  Aligned_cols=323  Identities=11%  Similarity=0.037  Sum_probs=220.3

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      ..++++....+..+.++...+.+...        +++..+..++++...+.+.   +.+.+++++++|+++|+..++.++
T Consensus        20 ~~i~~~~gl~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~---~~~~e~~~~~~~~~~a~~~~l~al   88 (366)
T d2aeua1          20 DALYDLSGLSGGFLIDEKDKALLNTY--------IGSSYFAEKVNEYGLKHLG---GDENDKCVGFNRTSSAILATILAL   88 (366)
T ss_dssp             GGCEECSSCCCCCCCCHHHHHHHTST--------THHHHHHHHHHHHHHHHHT---CCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             chHhhhccCCCCCCccHHHHHHHHHh--------cCchhhHHHHHHHHHHHcc---CCCccEEEEeCCHHHHHHHHHHHh
Confidence            34788887777767777766655321        2233344556666555552   334678999999999999999987


Q ss_pred             ccCCCEEEEe-CCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015890          110 CDAGDSVVMF-APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR  188 (398)
Q Consensus       110 ~~~gd~Vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~  188 (398)
                      ..+++.|+++ .|+|..+...++..|++++..         -|+|+|++.+++++  ++|++++|+||+  .++.+++++
T Consensus        89 ~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~---------~d~e~l~~~i~~~t--k~i~~~~p~n~~--~~~~~~l~~  155 (366)
T d2aeua1          89 KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNKIDKDT--LVIITGSTMDLK--VIELENFKK  155 (366)
T ss_dssp             CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTTCCTTE--EEEEECBCTTSC--BCCHHHHHH
T ss_pred             CCCCEEEEecCCCcchhHHHHHHhcCCeEECC---------CCHHHHHHhcCCCc--eEEEEEecCCCC--cCCHHHHHH
Confidence            6444444454 589999999999999986544         17899999999876  999999998885  356777999


Q ss_pred             HHHHHHHcCCEEEEeece--ecc--CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCC
Q 015890          189 ISDLCKAAGSWLVVDNTY--FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI  264 (398)
Q Consensus       189 i~~l~~~~~~~livDe~~--~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~  264 (398)
                      |+++|++||+++++||+|  ..+  .+.+. ....+.+++++|+||.+  +|+|+||++++   +++++.+........+
T Consensus       156 i~~ia~~~~~~~i~De~y~~~~~~~~~~~~-~~~~~~di~~~S~sK~~--~g~~~G~i~~~---~~~i~~~~~~~~~~g~  229 (366)
T d2aeua1         156 VINTAKNKEAIVFVDDASGARVRLLFNQPP-ALKLGADLVVTSTDKLM--EGPRGGLLAGK---KELVDKIYIEGTKFGL  229 (366)
T ss_dssp             HHHHHHHHTCCEEEECTTHHHHHHHTTCCC-HHHHTCSEEEEETTSSS--SSCSCEEEEEE---HHHHHHHHHHHHTTTC
T ss_pred             HHHHhccCcEEEEEecCccccccccccCCC-HhhcCceEEEecccccc--cccceeEEEec---HHHHHHHHHHHhcccc
Confidence            999999999999999999  223  22221 22233458889999977  48999999999   8999999888777777


Q ss_pred             CcchHHHHHHHHHhcCCc-hHHHHHHHHHHH----HHHHHHHHhccCCCC--ccccCCccEEEEeeCCCCC----CChHH
Q 015890          265 CASIISQHLALYSLQTGP-EWVTERVKDLVR----NREIIREALSPLGEG--AVKGGEGAIYLWARLPEKH----LDDFE  333 (398)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~----~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~  333 (398)
                      +.+++.++++..+|+... ..+++..+..++    ..+.+..........  ....+....+++.......    .+..+
T Consensus       230 ~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (366)
T d2aeua1         230 EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIE  309 (366)
T ss_dssp             BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCCcceeecccCHHH
Confidence            888889988888886422 122232222222    223333333333221  1122333566665543321    23567


Q ss_pred             HHHHHHHhcCeEEecCCCC-CCCCeEEEEecCCCHH--HHHHHHHHHHHHHH
Q 015890          334 VVRWLAHRHGVVVIPGGAC-GCRGHLRISFGGLVED--DCKAAADRLRRGLE  382 (398)
Q Consensus       334 ~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~--~~~~~~~~l~~~~~  382 (398)
                      ++.+|++++||.+.|+..| +..+++||+++..+.+  +.+.+++.+.+.++
T Consensus       310 ~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK  361 (366)
T d2aeua1         310 IGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK  361 (366)
T ss_dssp             HHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEEECCCCCCCCCEEEEeccccchhhCCHHHHHHHHHHHHH
Confidence            8889999999999999877 4678999999873222  23455555555554

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.96  E-value=3.5e-28  Score=224.93  Aligned_cols=330  Identities=15%  Similarity=0.081  Sum_probs=224.8

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcC---CCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL  107 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~  107 (398)
                      +.+.|+.+... +.|..+++++.+.+..   .....+.......++.+.+++.+.+++++++++|++|+|+|++++.++.
T Consensus         7 ~~~yld~~~~~-~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~~~~   85 (381)
T d1elua_           7 NKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW   85 (381)
T ss_dssp             TSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CCEEeeCCccc-CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhhcch
Confidence            34567666433 3467788888876642   1111222223334555556666666668889999999999999999999


Q ss_pred             Hh-ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCC-ChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          108 TL-CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       108 ~l-~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~-d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      ++ .++||+|+++.++|++..    ...+..|+++..+ +.+...... +.+.+++.+++++  +++++++++|+||.+.
T Consensus        86 ~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~i~~~t--~~v~i~~~~n~tG~~~  162 (381)
T d1elua_          86 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPKT--RLVILSHLLWNTGQVL  162 (381)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTTE--EEEEEESBCTTTCCBC
T ss_pred             hhhhcCCceEEEeccccceeeecccccccccccccccc-ccccccccchHHHHHHhhhcccc--cccccccccccccccc
Confidence            98 588999999999997644    3456679999988 765443222 3566777777765  9999999999999999


Q ss_pred             CHHHHHHHHHHHHH----cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015890          182 PERLLKRISDLCKA----AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL  256 (398)
Q Consensus       182 ~~~~l~~i~~l~~~----~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~  256 (398)
                      |   +++|.++|++    +++++++|+++ ++......  ...+.++++.|++|+++ .+.++|+++.+   ++..+.+.
T Consensus       163 ~---~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~--~~~~~D~~~~s~~K~~~-~p~G~g~l~~~---~~~~~~~~  233 (381)
T d1elua_         163 P---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDF--SRLEVDYYAFTGHKWFA-GPAGVGGLYIH---GDCLGEIN  233 (381)
T ss_dssp             C---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCT--TTSCCSEEEEESSSTTC-CCTTCEEEEEC---TTTGGGCC
T ss_pred             h---hhHHHHHHhhcccccccccccccccccccccccc--ccccccccccccccccc-ccchhhHHHhh---HHHHHhcC
Confidence            9   7888888887    46999999998 55433222  22344588999999996 33456888877   34443332


Q ss_pred             Hhh----------------------ccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          257 KVQ----------------------DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       257 ~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      ...                      .....+.+.....++.++++...  ...+.+.++..++++++.+.|++++++.++
T Consensus       234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  313 (381)
T d1elua_         234 PTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCL  313 (381)
T ss_dssp             CCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEec
Confidence            110                      01223556666666666665311  113455567777888999999988776665


Q ss_pred             c---CCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          313 G---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       313 ~---~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      .   +. +.++.+.++.. ....++...| +++||.++..   +.++++|+|++. ++.+|+++++++|++
T Consensus       314 ~~~~~~-~~~vsf~~~~~-~~~~~i~~~L-~~~gi~v~~~---~~~~~lRis~~~~nt~edid~ll~~l~e  378 (381)
T d1elua_         314 ATSAPQ-AGLVSFTVDSP-LGHRAIVQKL-EEQRIYLRTI---ADPDCIRACCHYITDEEEINHLLARLAD  378 (381)
T ss_dssp             CSSCCS-SSEEEEEECSS-SCHHHHHHHH-HHTTEECEEE---TTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             CCCCcc-ccEEEEEcCCC-CCHHHHHHHH-HhCCcEEEec---CCCCEEEEecCCCCCHHHHHHHHHHHHh
Confidence            4   33 34555555432 3456666655 6899988653   367899999987 789999999998875

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=2.7e-28  Score=224.26  Aligned_cols=321  Identities=16%  Similarity=0.132  Sum_probs=202.9

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCC---------CCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGAD---------EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD  114 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~---------~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd  114 (398)
                      .++++.+++.+.........|...         +-...+++.+++++    |  .+++++|+|+|+|+..++.+++++||
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~----g--~e~~~~t~g~t~a~~~~~~al~~~gd   87 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----G--CDVARVTNGAREAKFAVMHSLAKKDA   87 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----T--SSEEEEESSHHHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHh----C--cCEEEEECcHHHHHHHHHHHHhCCCc
Confidence            578899988775332111112111         11233555566555    5  46799999999999999999999999


Q ss_pred             EEEEeCCCCcChhhHHHhcCcEEEEeccCCC-CCCCCChHHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015890          115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRIS  190 (398)
Q Consensus       115 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~l~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~  190 (398)
                      +|+++.++|++....++..|++++.+ |.++ .++.+|++++++.+++.+   .+++|++++|+||||.+.|   +++|+
T Consensus        88 ~Vi~~~~~h~s~~~~~~~~g~~v~~v-~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I~  163 (364)
T d2e7ja1          88 WVVMDENCHYSSYVAAERAGLNIALV-PKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKIA  163 (364)
T ss_dssp             EEEEETTCCHHHHHHHHHTTCEEEEE-CCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHHH
T ss_pred             EEEeecccccccchHHHhccceEEEe-eeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhhe
Confidence            99999999999888899999999999 7654 357899999999997432   2468889999999999999   89999


Q ss_pred             HHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------c
Q 015890          191 DLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--------N  261 (398)
Q Consensus       191 ~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~--------~  261 (398)
                      ++|++||+++++|++| ++.-+...  ...+.+++++|+||+++.+| ++||++.+   +++++.+.....        .
T Consensus       164 ~ia~~~~i~livD~a~~~g~~~~~~--~~~g~D~~~~S~~K~~~~~g-~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~  237 (364)
T d2e7ja1         164 KVCSEYDVPLLVNGAYAIGRMPVSL--KEIGADFIVGSGHKSMAASG-PIGVMGMK---EEWAEIVLRRSEKYKNKEVEL  237 (364)
T ss_dssp             HHHHTTTCCEEEECTTTBTTBCCCH--HHHTCSEEEEEHHHHSSCCS-SCEEEEEC---TTTTTTTTCBCSSCTTSBGGG
T ss_pred             eccccccchhhccccchhhhhhhcc--cccccceeeeccccccCCCC-CEEEEEEC---HHHHHHHHhhccccCcccccc
Confidence            9999999999999999 55433221  11234488899999998665 78999998   444443322111        0


Q ss_pred             CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccc-cCCccEEEEeeCCCC------CCChHHH
Q 015890          262 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEK------HLDDFEV  334 (398)
Q Consensus       262 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~  334 (398)
                      ...+.+.....++.+.++...+.+++.. ...++++++.+.+.+.+..... .+......++..+..      .......
T Consensus       238 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (364)
T d2e7ja1         238 LGCTARGATIITLMASFPHVRERIKRWD-EEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFF  316 (364)
T ss_dssp             TTCCCCSHHHHHHHHHHHHHHHHGGGHH-HHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCeecCCCCCCcceEEEeccchHHHHHHhhccchH
Confidence            1112222333333333332112222222 2234556677777776652221 122222333333210      0111122


Q ss_pred             HHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          335 VRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       335 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ....+...|+....   .+....+|++.-..+++++++++++|+++++++
T Consensus       317 ~~~~l~~~~~~~~~---~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         317 LYRELKSRKIHGIK---PGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             HHHHHHHTTEECSC---TTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCCceec---CCCcceEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            33344567775432   234567787754468899999999999998864

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.96  E-value=7.9e-27  Score=217.26  Aligned_cols=338  Identities=16%  Similarity=0.135  Sum_probs=245.3

Q ss_pred             CCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHHH
Q 015890           29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFV  103 (398)
Q Consensus        29 g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~~  103 (398)
                      +++++.|+.+... +.|+.+++++.+.+.+....    .|.......++.+..++.+.++.|++ ++.++++++++++++
T Consensus        20 ~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n   98 (408)
T d1t3ia_          20 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAIN   98 (408)
T ss_dssp             TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred             CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHH
Confidence            4567888887655 46899999998887653211    11111111234444555555556886 578999999999999


Q ss_pred             HHHHHh----ccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCC
Q 015890          104 NIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN  175 (398)
Q Consensus       104 ~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~n  175 (398)
                      .++.++    .++|++|++..-.|++..    ..++..|.++..+ +.+..+ ..+.+.+++.+++++  ++|++.+.+|
T Consensus        99 ~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~-~~~~~~-~~~~~~l~~~~~~~t--~lv~i~~~~~  174 (408)
T d1t3ia_          99 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDEQE-SFDLEHFKTLLSEKT--KLVTVVHISN  174 (408)
T ss_dssp             HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCTTS-SBCHHHHHHHCCTTE--EEEEEESBCT
T ss_pred             HHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeee-eccccc-cccHHHhhhccCCCc--eEEEEecccc
Confidence            988763    468999999999997644    3446678999888 776554 568999999998876  9999999999


Q ss_pred             CCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       176 ptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      .||..+|   +++|.++|+++|+++++|.++ ++.........  +.++++.|.+|++|++|  +|+++.+   ++....
T Consensus       175 ~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~--~~D~~~~s~hK~~gp~G--~g~l~v~---~~~~~~  244 (408)
T d1t3ia_         175 TLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI--DCDWLVASGHKMCAPTG--IGFLYGK---EEILEA  244 (408)
T ss_dssp             TTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH--TCSEEEEEGGGTTSCTT--CEEEEEC---HHHHHH
T ss_pred             cccccCc---HHHHhhhhhccCceeeeccceeccccccccccc--CCceEEeccccccCCCC--ccccccc---hhhhhc
Confidence            9999999   889999999999999999999 66644433332  33488999999987555  6888888   666554


Q ss_pred             HHHhh---------------------ccCCCCcchHHHHHHHHHhcCCch-HHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015890          255 LLKVQ---------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVK  312 (398)
Q Consensus       255 l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  312 (398)
                      +....                     .....+.+.+...++..+++...+ .+++..++..++.+++.+.+++.+...+.
T Consensus       245 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~  324 (408)
T d1t3ia_         245 MPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLY  324 (408)
T ss_dssp             SCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             CCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCcccccc
Confidence            32111                     112456677888888888774222 24566667777888888999888775555


Q ss_pred             cCC-----ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--------CCCeEEEEecC-CCHHHHHHHHHHHH
Q 015890          313 GGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLR  378 (398)
Q Consensus       313 ~~~-----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~  378 (398)
                      .+.     .+..+.+.++.  .+..++...| .++||.++.|+.|.        .++.||||++. .+++|++++++.|+
T Consensus       325 ~~~~~~~~~~~iv~f~~~~--~~~~~v~~~L-~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~  401 (408)
T d1t3ia_         325 GPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQ  401 (408)
T ss_dssp             SCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCccccCcceEEEEEeCC--CCHHHHHHHH-hhCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHH
Confidence            321     13345555553  3577777766 68999999998773        36789999999 89999999999999


Q ss_pred             HHHHHH
Q 015890          379 RGLEEL  384 (398)
Q Consensus       379 ~~~~~~  384 (398)
                      ++++.+
T Consensus       402 ~~~~~f  407 (408)
T d1t3ia_         402 ATIRFF  407 (408)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            998764

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.4e-27  Score=218.04  Aligned_cols=332  Identities=17%  Similarity=0.116  Sum_probs=234.3

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCCC------CCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGA------DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+.++||+.++ -.+..+|.+.+++.+++.+...+...+      .....++++.+++++    +  .+.++++++++.
T Consensus        43 dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~----g--~e~al~~~SG~~  116 (401)
T d1fc4a_          43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----G--MEDAILYSSCFD  116 (401)
T ss_dssp             TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----T--CSEEEEESCHHH
T ss_pred             CCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh----c--CCceEEecchhh
Confidence            678899998765 244568999999999886532221111      222345666666665    4  567899999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc---c-CCCCeEEEEeCCCCC
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T-KPTPKLVSVVNPGNP  176 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~---~-~~~~~~v~i~~p~np  176 (398)
                      |+..++.++.+++|.|++....|.+....+...+.++..+ +.      .|.+++++.++   . .....+|++....+.
T Consensus       117 An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~-~~------~d~~~le~~~~~~~~~~~~~~liv~egv~s~  189 (401)
T d1fc4a_         117 ANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMQELEARLKEAREAGARHVLIATDGVFSM  189 (401)
T ss_dssp             HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CT------TCHHHHHHHHHHHHHTTCSSEEEEEESEETT
T ss_pred             hhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEE-cC------CChHHHHHHHHHhhhcccCceEEEEcCCCCC
Confidence            9999999999999999999999999998888888888776 32      25555555543   2 232356777777788


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-ec-c--CCCcc---ccccCCcEEEEcccccccCCCcceeEEEEccCCcH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM-Y--DGRKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE  249 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~-~--~~~~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~  249 (398)
                      .|.+.+   ++++.++|++||+++|+||+| +. +  .|...   .....+.+++++|++|.+|  |...|++.++   +
T Consensus       190 ~G~~~~---L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~---~  261 (401)
T d1fc4a_         190 DGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAAR---K  261 (401)
T ss_dssp             TTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEEC---H
T ss_pred             CCchhh---hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCC---H
Confidence            899889   999999999999999999999 32 2  22221   1112345688999999995  3344888888   7


Q ss_pred             HHHHHHHHhhc--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          250 GFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       250 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      ++++.+.....  .++...+++...++...++. .....+.+++++++.+.+++.+...+. .+..+. +..+.+.+...
T Consensus       262 ~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~-~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~-~pIv~v~~~~~  338 (401)
T d1fc4a_         262 EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM-VEAGSELRDRLWANARQFREQMSAAGF-TLAGAD-HAIIPVMLGDA  338 (401)
T ss_dssp             HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHTTC-CBCCSS-SSEEEEEEECH
T ss_pred             HHHHHHHcCChhhhhcCCCCHHHHHHHHhhhcc-cccCHHHHHHHHHHHHHHHhhhcccCC-ccCCCC-CCEEEEEECCH
Confidence            88887764322  23344555666666666653 222356677888888999999888776 444344 44444444321


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHh
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~  385 (398)
                       ....++.++|+ ++||++.+..++.   ....+|++++. .|++|++++++.|+++.+++.
T Consensus       339 -~~a~~~~~~L~-~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg  398 (401)
T d1fc4a_         339 -VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             -HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             -HHHHHHHHHHH-HCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence             13456777775 8899997755432   23469999988 899999999999999988763

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.8e-26  Score=209.83  Aligned_cols=327  Identities=14%  Similarity=0.115  Sum_probs=233.7

Q ss_pred             cCCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        28 ~g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      +|+++++|+.++ -.+..+|++.+++.+++.+...      ..++..+-..++++.+++++    |  .+..+++++++.
T Consensus        36 ~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~----g--~e~al~~~SG~~  109 (383)
T d1bs0a_          36 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----G--YSRALLFISGFA  109 (383)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----T--CSEEEEESCHHH
T ss_pred             CCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc----C--CCceEEecccch
Confidence            467899998865 3445689999999998865221      11222233366677777666    4  467888999999


Q ss_pred             HHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC-CCCeEEEEeCCCCCCcc
Q 015890          101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGT  179 (398)
Q Consensus       101 a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~-~~~~~v~i~~p~nptG~  179 (398)
                      ++..++.++.+++|.|++....|.......+..+.+++.+ +      +.|++++++.+... ....+|+++.+++.+|.
T Consensus       110 an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~-~------hnd~~~le~~l~~~~~~~~~vv~e~v~s~~G~  182 (383)
T d1bs0a_         110 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-A------HNDVTHLARLLASPCPGQQMVVTEGVFSMDGD  182 (383)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-C------TTCHHHHHHHHHSCCSSCEEEEEESBCTTTCC
T ss_pred             hhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEe-c------chHHHHHHHHhcccCCCceEEEecCCCCCCCc
Confidence            9999999999999999999999999999899888888877 3      23888998888632 22467888889999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc-ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHH
Q 015890          180 YIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ  254 (398)
Q Consensus       180 ~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~  254 (398)
                      +.|   +++|.++|++||+++++||+| ++.   .|..... ......+++.+++|++|.+|   |++.++   .+.++.
T Consensus       183 i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~G---g~v~~~---~~~~~~  253 (383)
T d1bs0a_         183 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADY  253 (383)
T ss_dssp             BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHH
T ss_pred             ccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccccccc---cccccc---hhHHHH
Confidence            999   899999999999999999999 433   3322111 11234466789999998777   898888   677777


Q ss_pred             HHHhhc--cCCCCcchHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCCh
Q 015890          255 LLKVQD--NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD  331 (398)
Q Consensus       255 l~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (398)
                      ++....  .++...+++..+++.++++.. ....+....+..++..++.+.|.+.+. .+.... +.++.+.+... ...
T Consensus       254 l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~-s~Ii~v~~g~~-~~a  330 (383)
T d1bs0a_         254 LLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLADSC-SAIQPLIVGDN-SRA  330 (383)
T ss_dssp             HHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECSCC-SSBCCEEEESH-HHH
T ss_pred             HHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCEEEEEECCH-HHH
Confidence            754432  223344455555555565431 234466777788889999999998886 444333 43333333321 134


Q ss_pred             HHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          332 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       332 ~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      .++.++|+ ++||++.+..++.   ....+|++++. .+++|++++++.|..+
T Consensus       331 ~~~~~~L~-~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         331 LQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             HHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            56777775 8899998765442   23469999999 8999999999988753

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.95  E-value=1.2e-25  Score=205.42  Aligned_cols=328  Identities=14%  Similarity=0.087  Sum_probs=233.2

Q ss_pred             CCCeEEcCCcc-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCc----HHHHHHHHHHHhhhcCCCCCcEEEecChHHH
Q 015890           29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGL----PELRDALVKKLNQENKLYKSSVMVTAGANQA  101 (398)
Q Consensus        29 g~~~~~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~----~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a  101 (398)
                      ++++++|+.++ -.+..+|+++++..+++.+...+..+  ...|.    .++++.+++|+    +  .+..++++++..|
T Consensus        44 ~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~----g--~e~all~~sG~~A  117 (396)
T d2bwna1          44 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----Q--KEAALVFSSAYNA  117 (396)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----T--CSEEEEESCHHHH
T ss_pred             CeEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh----C--CCceeeeecchHH
Confidence            46789999876 45567899999998888653221111  11233    45555566655    5  4678888889999


Q ss_pred             HHHHHHHh--ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc--cCCCCeEEEEeCCCCCC
Q 015890          102 FVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPS  177 (398)
Q Consensus       102 ~~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~--~~~~~~~v~i~~p~npt  177 (398)
                      +..++.++  .+++|-|+...-.|.+....++..+.+++.+ +-      -|.+++++.++  .....++|+++...+.+
T Consensus       118 n~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f-~H------nd~~~l~~l~~~~~~~~~~~iv~egvySmd  190 (396)
T d2bwna1         118 NDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RH------NDVAHLRELIAADDPAAPKLIAFESVYSMD  190 (396)
T ss_dssp             HHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CT------TCHHHHHHHHHHSCTTSCEEEEEESBCTTT
T ss_pred             HHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEe-ec------chHHHhhhHHhhhcccCceeEEEEeeccCc
Confidence            99999988  4688889999999999999999999988877 32      26667766665  12224677788889999


Q ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEeece-ecc---CCCcccc---ccCCcEEEEcccccccCCCcceeEEEEccCCcHH
Q 015890          178 GTYIPERLLKRISDLCKAAGSWLVVDNTY-FMY---DGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG  250 (398)
Q Consensus       178 G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~---~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~  250 (398)
                      |.+.|   +.+|.++|++||+++++||+| ++.   .|.....   .....+++++|++|+||..|   |++.++   ++
T Consensus       191 Gd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~---~~  261 (396)
T d2bwna1         191 GDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---AR  261 (396)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---HH
T ss_pred             ccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh---HH
Confidence            99999   999999999999999999999 444   3332211   12344688999999999887   898888   78


Q ss_pred             HHHHHHHhhcc--CCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCC
Q 015890          251 FATQLLKVQDN--IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK  327 (398)
Q Consensus       251 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  327 (398)
                      +++.+......  ++...+++..+++.++++. ..+..++.+..+..+.+.+++.+...+. .+.... +..+.+.+...
T Consensus       262 ~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~-spIvpv~ig~~  339 (396)
T d2bwna1         262 MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGM-PIIDHG-SHIVPVVIGDP  339 (396)
T ss_dssp             HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSCEEEECCCH
T ss_pred             HHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCC-CcCCCC-CCEEEEEeCCH
Confidence            88888654432  3334455555556666653 2233456667777888889888888776 333333 45555555432


Q ss_pred             CCChHHHHHHHHHhcCeEEecCCCCC---CCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          328 HLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       328 ~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                       ....++.++|++++||++.+..++.   ....+||+++. .+.+|+++++++|++.+
T Consensus       340 -~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw  396 (396)
T d2bwna1         340 -VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW  396 (396)
T ss_dssp             -HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred             -HHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHhC
Confidence             2355677788878999998766543   24579999999 89999999999998763

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=4.2e-27  Score=213.74  Aligned_cols=326  Identities=15%  Similarity=0.155  Sum_probs=214.6

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccC
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA  112 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~  112 (398)
                      +||..-. ...|+|++++||.++...  ...|++++...++++.+++++    |  .+.+++++|||+|+..++.++.++
T Consensus         2 ~~~~~~~-~t~p~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~----G--~~~~~~~~sGt~A~~~al~a~~~~   72 (343)
T d1m6sa_           2 IDLRSDT-VTKPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----G--KEAALFVPSGTMGNQVSIMAHTQR   72 (343)
T ss_dssp             EECSCGG-GCCCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHT----T--CSEEEEESCHHHHHHHHHHHHCCT
T ss_pred             ccccccc-CCCCCHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHHHhcc
Confidence            5664332 233579999999876433  345778877888888888876    4  357889999999999999999999


Q ss_pred             CCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccC----CCCeEEEEe-CCCCCCccCCCHH
Q 015890          113 GDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVV-NPGNPSGTYIPER  184 (398)
Q Consensus       113 gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~----~~~~~v~i~-~p~nptG~~~~~~  184 (398)
                      ||.+++..+.+..+.   ......+..+..+ +.+  ....|++.+++.+...    ..+.++++. .++++.|.+.+.+
T Consensus        73 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (343)
T d1m6sa_          73 GDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLE  149 (343)
T ss_dssp             TCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHH
T ss_pred             CCceeccccccceeeecccccccccceeecc-ccc--cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHH
Confidence            999999998885543   3334445555555 333  2356899999988743    223444444 6788899999999


Q ss_pred             HHHHHHHHHHHcCCEEEEeece--ecc--CCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015890          185 LLKRISDLCKAAGSWLVVDNTY--FMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD  260 (398)
Q Consensus       185 ~l~~i~~l~~~~~~~livDe~~--~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~  260 (398)
                      ++++|+++|+++|+++++|+++  +..  ...............+.+.+|..  .|...|+++..   .+.+........
T Consensus       150 ~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~---~~~~~~~~~~~~  224 (343)
T d1m6sa_         150 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGL--CAPVGSVVVGD---RDFIERARKARK  224 (343)
T ss_dssp             HHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTT--CCSSCEEEEEC---HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCeEEEeccccccccccccccchhhhccccccccccccccc--ccccccccccc---HHHHhhhHhhCc
Confidence            9999999999999999999999  221  11111111111223333434433  45666787777   666665554443


Q ss_pred             cCCCCcchHHHHHHH--HHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHH
Q 015890          261 NIPICASIISQHLAL--YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL  338 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  338 (398)
                      ....+.+.....++.  ........+...    ..++..++.+.+..++......+..++++++.++....+..+++++|
T Consensus       225 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~L  300 (343)
T d1m6sa_         225 MLGGGMRQAGVLAAAGIIALTKMVDRLKE----DHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEAL  300 (343)
T ss_dssp             HHTCCCSSTHHHHHHHHHHHHHSSTTHHH----HHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHH
T ss_pred             ccccccchhHHHHHhhhhhhhhhHHHHHH----HHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHHHHHHH
Confidence            333333333322222  222222222222    33333444444444444344445557899999876555778898887


Q ss_pred             HHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          339 AHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       339 l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      . ++||.+.+.    .++.+||+++. .+++|+++++++|+++++++
T Consensus       301 ~-~~Gi~v~~~----~~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         301 R-NSGVLANAV----SDTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             H-HHTEECEEE----ETTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             H-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5 889999875    46789999887 78999999999999999986

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.1e-26  Score=209.09  Aligned_cols=334  Identities=14%  Similarity=0.129  Sum_probs=235.7

Q ss_pred             EEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHHHHHHhcc
Q 015890           33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCD  111 (398)
Q Consensus        33 ~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~~~~~l~~  111 (398)
                      +-|+-|  |.+.|++|+++|....    .+ + .+..+.++.+.+.+.++++++++.+ .|++++|+|++++.++.+++.
T Consensus        21 ~l~~pG--P~~~~~~Vl~am~~~~----i~-H-Rs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~   92 (388)
T d1h0ca_          21 LLLGPG--PSNLPPRIMAAGGLQM----IG-S-MSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLE   92 (388)
T ss_dssp             EECSSS--CCCCCHHHHHHHTCCC----CC-T-TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCC
T ss_pred             ccccCC--CCCCCHHHHHHhCcCC----CC-C-CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhc
Confidence            335555  6678899999885432    22 2 3445566777777777777788644 699999999999999999999


Q ss_pred             CCCEEEEeCCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015890          112 AGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI  189 (398)
Q Consensus       112 ~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i  189 (398)
                      +|+++++...++++..  ..+...+..+..+ ..+. +..+|.+.+++.+...+ ++++++++.+|.||++.|   +++|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~-~~~v~~~~~~n~tG~i~p---i~~i  166 (388)
T d1h0ca_          93 PGDSFLVGANGIWGQRAVDIGERIGARVHPM-TKDP-GGHYTLQEVEEGLAQHK-PVLLFLTHGESSTGVLQP---LDGF  166 (388)
T ss_dssp             SSCCEEECBSSHHHHHHHHHHHHHC--CBCC-BCCT-TCCCCHHHHHHHHHHHC-CSEEEEESEETTTTEECC---CTTH
T ss_pred             cCCceeeecccceeeeecccccccccccccc-ccCC-ccccchHHHHHHhccCC-cceEEEeeeeeccccccC---HHHH
Confidence            9999999988886543  3445556665555 4433 34578888888776433 599999999999999999   9999


Q ss_pred             HHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------
Q 015890          190 SDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------  259 (398)
Q Consensus       190 ~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---------  259 (398)
                      .++|+++|+++++|.++ ++....  .....+.+++++|.+|+++.++ .+|+++.+   +..++.+....         
T Consensus       167 ~~~~~~~g~~~~vD~~qs~g~~~~--d~~~~~~D~~~~s~~K~~~gp~-g~~~~~~~---~~~~~~~~~~~~~~~~~~~~  240 (388)
T d1h0ca_         167 GELCHRYKCLLLVDSVASLGGTPL--YMDRQGIDILYSGSQKALNAPP-GTSLISFS---DKAKKKMYSRKTKPFSFYLD  240 (388)
T ss_dssp             HHHHHTTTCEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTCCCT-TCEEEEEC---HHHHHHHTTCSSCCSCSTTC
T ss_pred             HHHhhcccccceeccccccccccc--cccccccceecccccccccCCC-ceEEEeec---HHHHHhhhhccccccccccc
Confidence            99999999999999999 554332  2222344588889999996333 45777777   55555543211         


Q ss_pred             --------------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccccC---CccEEEE
Q 015890          260 --------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLW  321 (398)
Q Consensus       260 --------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~  321 (398)
                                    .....+++.....++..+++... ..++...++..++...+++.++..+.......   .....+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~  320 (388)
T d1h0ca_         241 IKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTT  320 (388)
T ss_dssp             HHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEE
T ss_pred             cchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCcccccCCHHHcCCeEEE
Confidence                          11233456666666666665422 22456666677777788888877665332221   1123456


Q ss_pred             eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEE-ecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                      +.++++ .+..++...|++++||.+..|..+...+.|||| ++. .+.+|+++++++|+++++++.++
T Consensus       321 ~~~p~~-~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~  387 (388)
T d1h0ca_         321 VAVPAG-YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKK  387 (388)
T ss_dssp             EECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC
T ss_pred             EECCCC-CCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence            677654 378889998988889999999877677899999 665 78899999999999999998764

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=3.2e-25  Score=204.42  Aligned_cols=321  Identities=17%  Similarity=0.131  Sum_probs=205.7

Q ss_pred             CCcHHHHHHHHHhhcCCCCCCC---CCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh----ccCCCE
Q 015890           43 QPPKMAMEKVKELVWDPSISKY---GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL----CDAGDS  115 (398)
Q Consensus        43 ~~~~~v~~a~~~~~~~~~~~~y---~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l----~~~gd~  115 (398)
                      ++|+.+++++.+.+.+.....+   .......+..+..++.+++++|+++++|++++|+|+++..++.++    ..+|+.
T Consensus        12 ~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~~~~~~~~~g~~   91 (376)
T d1eg5a_          12 RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRT   91 (376)
T ss_dssp             CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCE
T ss_pred             cCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhhhcccccccccCcc
Confidence            4589999999998875321111   011111222233344445555899999999999999999998753    466778


Q ss_pred             EEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015890          116 VVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL  192 (398)
Q Consensus       116 Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l  192 (398)
                      |++....|+...   ..++..|++++.+ |.++++ .+|++++++.+++++  ++|++++++|+||...+   ++++.++
T Consensus        92 v~~~~~~~~~~~~~~~~~~~~g~~v~~v-p~~~~~-~id~~~l~~~i~~~t--~lv~is~v~~~tG~~~~---~~~i~~~  164 (376)
T d1eg5a_          92 IITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSRG-VVKLEELEKLVDEDT--FLVSIMAANNEVGTIQP---VEDVTRI  164 (376)
T ss_dssp             EEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTTS-CBCHHHHHHHCCTTE--EEEEEESBCTTTCBBCC---HHHHHHH
T ss_pred             cccccccchhhHHHHHHHHhcCCEEEEE-cCCCCC-eECHHHHHHhcCCCc--eEEEEECCccccceeee---ehhhhhh
Confidence            888877775544   3446679999999 887654 789999999999876  99999999999999999   6667776


Q ss_pred             HHH--cCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh-------hccC
Q 015890          193 CKA--AGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------QDNI  262 (398)
Q Consensus       193 ~~~--~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~-------~~~~  262 (398)
                      ++.  .++++++|+++ ++.......  ..+.+++++|.+|++|++|.++.|+.-..   .    ++..       ....
T Consensus       165 ~~~~~~~~~~~vD~~q~~g~~~~d~~--~~~~D~~~~s~~K~~gp~G~~~l~~~~~~---~----~~p~~~g~~~~~~~~  235 (376)
T d1eg5a_         165 VKKKNKETLVHVDAVQTIGKIPFSLE--KLEVDYASFSAHKFHGPKGVGITYIRKGV---P----IRPLIHGGGQERGLR  235 (376)
T ss_dssp             HHHHCTTCEEEEECTTTTTTSCCCCT--TTCCSEEEEEGGGGTSCTTCEEEEECTTS---C----CCCSBCSSCTTTTTB
T ss_pred             hhhcccCceeEEEeeecccccccccc--ccCccceecccceeecCCCceeEEeccCc---c----cCCcccCCCCccccc
Confidence            644  49999999999 555333222  23345889999999988887555543221   1    1111       1111


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CCccEEEEeeCCCCCCChHHHHHHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLAH  340 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~  340 (398)
                      ....+..............................++.+.|.......+..  ......+...++.  .+...+... +.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-L~  312 (376)
T d1eg5a_         236 SGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPN--IRGSTLQNL-LS  312 (376)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTT--CCHHHHHHH-HH
T ss_pred             CCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccCC--CCHHHHHHH-Hh
Confidence            223344444444444432112233444455556666777776554422211  1112233444443  356666665 46


Q ss_pred             hcCeEEecCCCCCC-------------------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          341 RHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       341 ~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      ++||.+++|..|..                   .+.||||++. .|++|++++++.|++++.
T Consensus       313 ~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             hCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence            89999998876532                   1369999998 799999999999999876

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=2.2e-23  Score=188.83  Aligned_cols=328  Identities=13%  Similarity=0.083  Sum_probs=212.9

Q ss_pred             CCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh
Q 015890           30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL  109 (398)
Q Consensus        30 ~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l  109 (398)
                      .+.++|.. +|..+.+|+|++||.++.... ...|+.++...++|+.+++++    |. +..+++++|+|+|+..++..+
T Consensus         2 ~~~~~f~s-~n~~g~~P~v~~A~~~a~~~~-~~~~~~~~~~~~l~~~la~~~----g~-~~~v~f~~sGt~An~~a~~~~   74 (345)
T d1v72a1           2 PPALGFSS-DNIAGASPEVAQALVKHSSGQ-AGPYGTDELTAQVKRKFCEIF----ER-DVEVFLVPTGTAANALCLSAM   74 (345)
T ss_dssp             CCCCBCSC-GGGCCCCHHHHHHHHHTTSSC-CCSTTCSHHHHHHHHHHHHHH----TS-CCEEEEESCHHHHHHHHHHTS
T ss_pred             CCCcCcCC-CCCCCCCHHHHHHHHHHhccC-ccccCCCHHHHHHHHHHHHHH----CC-CcEEEECCchHHHHHHHHHHH
Confidence            46788885 456678999999999875443 455666666667777777766    54 356899999999999999999


Q ss_pred             ccCCCEEEEeCCCCcChh---hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC----CCeE-EEEeCCCCCCccCC
Q 015890          110 CDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKL-VSVVNPGNPSGTYI  181 (398)
Q Consensus       110 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~----~~~~-v~i~~p~nptG~~~  181 (398)
                      +..++.+++....+....   ......+..+..+ +.. .....+++.++..+....    .+.+ ++...+.|+.|...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (345)
T d1v72a1          75 TPPWGNIYCHPASHINNDECGAPEFFSNGAKLMT-VDG-PAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIY  152 (345)
T ss_dssp             CCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEE-CCC-GGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCC
T ss_pred             HhcCCccccccccceeeechhhHHHhcCcccccc-ccc-ccccccHHHhhhhhcccccccccccceeeeeeccccccccc
Confidence            998888888777764433   2334455666555 333 334679999999987432    1233 34446778889999


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece--ecc--CCC--ccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY--FMY--DGR--KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~--~~~--~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      +.++++++.++|+++|+++++|+++  ...  ...  .......+....+.+.+|..+ .+. .+.+...   .......
T Consensus       153 ~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~---~~~~~~~  227 (345)
T d1v72a1         153 TLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGV-LAA-EAIVLFN---TSLATEM  227 (345)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTC-SSC-EEEEESS---GGGHHHH
T ss_pred             cchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcccccc-ccc-cccccch---hhhhhhc
Confidence            9999999999999999999999999  111  111  111111222333444444332 222 2223333   2222222


Q ss_pred             HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHH
Q 015890          256 LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV  335 (398)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (398)
                      .........+.+....++.............+......++..++.+.+.+++++.+..|..+++++++++      .+.+
T Consensus       228 ~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~~~------~~~~  301 (345)
T d1v72a1         228 SYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD------SAMI  301 (345)
T ss_dssp             HHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC------HHHH
T ss_pred             cccccccccccchhhHHhhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEEcC------HHHH
Confidence            1111111222222222222222222234455666667777888889999988877777777888888875      2566


Q ss_pred             HHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG  380 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~  380 (398)
                      +.|+ ++||.+.++.  ..++.+||+++. +|+||+++++++|+++
T Consensus       302 ~~L~-~~gi~v~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         302 DALL-KAGFGFYHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             HHHH-HTTCBCBCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             HHHH-HcCCCccccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            7775 7899886543  246799999988 8999999999999875

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=6.6e-24  Score=197.74  Aligned_cols=349  Identities=13%  Similarity=0.058  Sum_probs=234.0

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCC-CCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|  ...++ .+|++.+++.+++.+....  .......+....+++.+.+..+.+ .+.++++++|++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~  114 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT--CFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAV  114 (425)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCC--CTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred             CCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCc--ccccccCcHHHHHHHHHHhhhhhcccceeeeeccccchh
Confidence            468999999986  45555 6899999999998773211  112222445566777776666433 45789999999999


Q ss_pred             HHHHHHhc--cCCCEEEEeCCCCcChhhHHHhc-Cc-------------EEEEeccCC--CCC-CCC----ChHHHHHhh
Q 015890          103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS--SKT-LHP----DADWLEKTL  159 (398)
Q Consensus       103 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~--~~~-~~~----d~e~l~~~l  159 (398)
                      +.+++...  ....+|+....+|++....+... |.             ..... +.+  ..+ ...    +.+.+....
T Consensus       115 e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  193 (425)
T d1sffa_         115 ENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKND  193 (425)
T ss_dssp             HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHHT
T ss_pred             hhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCcccc-CCccccccccchhhHHHHHHHHHhc
Confidence            99998864  23368999999999977644332 21             11111 111  111 000    011111222


Q ss_pred             ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      .....+.+|+++..+...|. ..+++.++.|.++|++||+++|+||++  +...|........+....+.+++|.+| .|
T Consensus       194 ~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~-gG  272 (425)
T d1sffa_         194 AAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIA-GG  272 (425)
T ss_dssp             CCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGG-TS
T ss_pred             ccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccC-CC
Confidence            22233688888866666776 468889999999999999999999999  555555443333322233457889997 78


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      +++|.++++   +++.+.+.......+++.++.+.+++.+.|+..+  +..++..+.-.+..+.+.+.+++.+.+..+..
T Consensus       273 ~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg  349 (425)
T d1sffa_         273 FPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG  349 (425)
T ss_dssp             SCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred             cceEEEEEc---HHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEc
Confidence            999999999   7888777666666788899999999999998622  34455555556667777777777776444555


Q ss_pred             CccEEEEeeCCCC----CCC---hHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhc
Q 015890          315 EGAIYLWARLPEK----HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       315 ~~~~~~~~~~~~~----~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                      . |.++.+.+...    ..+   ...+..+++ ++||++.++..  ..+.||++++. .+++++++++++|.++++++.+
T Consensus       350 ~-Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~g~--~~n~i~~~PpL~it~~eid~~l~~l~~al~eikk  425 (425)
T d1sffa_         350 L-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ  425 (425)
T ss_dssp             E-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred             c-ccEEEEEEeccCccCCccHHHHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            5 44444444211    111   245666665 88999887532  34679999776 7999999999999999998753

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2.8e-23  Score=188.11  Aligned_cols=318  Identities=14%  Similarity=0.043  Sum_probs=224.3

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeC
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA  120 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~  120 (398)
                      |.+.|++|++|+.+...    + + .+..+.++.+.+.+.+++.++.+.+.+++++|+|.+++.++.+++.+|++|++..
T Consensus         8 P~~v~~~V~~am~~~~~----~-h-r~~~f~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~   81 (348)
T d1iuga_           8 PVRLHPKALEALARPQL----H-H-RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV   81 (348)
T ss_dssp             SCCCCHHHHHHHHSCCC----C-T-TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCCCHHHHHHhcCCCC----C-C-CCHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeec
Confidence            66789999999876432    2 2 3344566667777777777787778899999999999999999999999999998


Q ss_pred             CCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-
Q 015890          121 PYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-  197 (398)
Q Consensus       121 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~-  197 (398)
                      .++++  +...++.+|.++..+ ..+. +..++++.+   .+.+  ++++++++..+.||...|   +++|.++|++++ 
T Consensus        82 ~G~f~~~~~~~a~~~~~~~~~~-~~~~-g~~~~~~~~---~~~~--~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~~  151 (348)
T d1iuga_          82 YGKFSERFYEIALEAGLVVERL-DYPY-GDTPRPEDV---AKEG--YAGLLLVHSETSTGALAD---LPALARAFKEKNP  151 (348)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEE-ECCT-TCCCCTTTS---CCSS--CSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             chHHHHHHHHHHHhcCcccccc-cccC-CCccccccc---cccC--CCeeEEEecchhhhhhcc---HHHHHHHHHhhhc
Confidence            88765  556778888877776 4432 223343332   2233  589999999999999999   888899998874 


Q ss_pred             -CEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHH--------------hhc
Q 015890          198 -SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK--------------VQD  260 (398)
Q Consensus       198 -~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~--------------~~~  260 (398)
                       .++++|.++ ++....+.  ...+.+++++|.+|++ |+||  +|+++.+   ++.+++++.              ...
T Consensus       152 ~~l~~vDavss~g~~~i~~--d~~~iD~~~~~sqK~l~gppG--~~~v~~s---~~~le~~~~~~~~~dl~~~~~~~~~~  224 (348)
T d1iuga_         152 EGLVGADMVTSLLVGEVAL--EAMGVDAAASGSQKGLMCPPG--LGFVALS---PRALERLKPRGYYLDLARELKAQKEG  224 (348)
T ss_dssp             TCEEEEECTTTBTTBCCCS--GGGTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred             cceeechhhhccccccccc--ccccCCEEEeccccceecCCc--eeeeeec---hHHHhhhcccccccchhhhhhhhccC
Confidence             789999888 65543332  2234558889999999 6677  5888888   555553211              122


Q ss_pred             cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC-ccEEEEeeCCCCCCChHHHHHHHH
Q 015890          261 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLA  339 (398)
Q Consensus       261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll  339 (398)
                      .+++|++.....++.++|+...+...+..+..+.....++..++..+. ...... ......+.+|++. +..++...| 
T Consensus       225 ~~~~Tp~v~~i~~l~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl-~~~~~~~s~~v~~~~~P~g~-~~~~~~~~l-  301 (348)
T d1iuga_         225 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGGL-RPVPKRFSPAVAAFYLPEGV-PYARVKEAF-  301 (348)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTTC-EESCSSBCTTCEEEECCTTC-CHHHHHHHH-
T ss_pred             cccccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhh-ccChhhcCCeEEEEECCCCC-CHHHHHHHH-
Confidence            456788888999999888753222344444444444555555555444 333221 1224567777653 677887766 


Q ss_pred             HhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          340 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       340 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +++||.+.+|...-....+||+... .+.+|++.+++.|+++++++
T Consensus       302 ~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         302 AQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             HTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            6899999998755456789998654 88999999999999999886

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=7.4e-23  Score=182.37  Aligned_cols=356  Identities=17%  Similarity=0.145  Sum_probs=255.5

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhh
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQE   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~   84 (398)
                      +.+.|.+.+.-+.+.....++.++|--..|.  .+|.+++++...+.+.-.-+|      +-.....++++...+..++.
T Consensus         4 l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~--~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~l   81 (405)
T d1kl1a_           4 LPQQDPQVFAAIEQERKRQHAKIELIASENF--VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL   81 (405)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHcCceEeccCCc--CCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            4456666677777666666889999887766  479999998887755322223      22334455665566777778


Q ss_pred             cCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH-----HHhcCcEEEEeccCCCCCCCCChHHHHHhh
Q 015890           85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----FQMTGVTHILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus        85 ~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      ++...-+|-..+ ++.|+..++.+|++|||+|+..++...++...     ......+.+.+ +.+.+++.+|.|++++.+
T Consensus        82 F~a~~anVqp~S-Gs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~ID~d~l~~~a  159 (405)
T d1kl1a_          82 FGAEHANVQPHS-GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKA  159 (405)
T ss_dssp             HCCSEEECCCSS-HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHH
T ss_pred             hCCCcceeeccC-chHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEe-ccchhcccccHHHHHHHH
Confidence            887666666555 55999999999999999999998887665532     22233688888 888888899999999999


Q ss_pred             ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      +..+ |++|++....+|  ..++   ++++.++|++.|.+++.|.+|   +...+.-..+..+ .+++++|.+|+|  +|
T Consensus       160 ~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~-aDvvt~tThKtl--rG  230 (405)
T d1kl1a_         160 RLHR-PKLIVAAASAYP--RIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPY-AHFVTTTTHKTL--RG  230 (405)
T ss_dssp             HHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTT-CSEEEEESSSTT--CC
T ss_pred             HhhC-cceEEecccccc--cccC---hHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhh-hhheeccccccc--cC
Confidence            8655 799998754444  4456   899999999999999999999   4445554455544 357788999998  58


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  314 (398)
                      .|.|.+..+   +++.+++.... .....++.....++.+.++.+ ..+.++.+.+++.++++.|.+.|.+.|...+.+.
T Consensus       231 Prgg~I~~~---~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~gg  307 (405)
T d1kl1a_         231 PRGGMILCQ---EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGG  307 (405)
T ss_dssp             CSCEEEEEC---HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             CCCceEEec---chhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecCC
Confidence            889999988   78888886544 333344444555555555543 3456788999999999999999999888444454


Q ss_pred             CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~  383 (398)
                      .....+++++.....+..+ ++++|++.||.+.--..+      ..+..|||+...     ..++|+.++.+.|.++++.
T Consensus       308 Td~H~vlvdl~~~~~~g~~-ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~  386 (405)
T d1kl1a_         308 TDNHLLLVDLRPQQLTGKT-AEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             CSSSEEEEECGGGTCCHHH-HHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             CccceeeccccccCCcHHH-HHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            5577888888654445544 455667899988632221      134689999433     4778999999988888854

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.92  E-value=9.1e-23  Score=188.61  Aligned_cols=342  Identities=9%  Similarity=0.046  Sum_probs=226.9

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ -+|++.+|+.+++.+..   |..........+.+.+.+....+  .+.+.++.++++++.
T Consensus        36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~sgs~a~~  110 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT---ICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANE  110 (404)
T ss_dssp             TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS---CCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHH
T ss_pred             CCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCC---CcccccchHHHHHHHHhhhhccc--cceeeeeccccchHH
Confidence            4789999998763  4444 58999999999987632   21111223334445555544434  467899999999999


Q ss_pred             HHHHHhcc----------CCCEEEEeCCCCcChhhHHHhcCcEEE----EeccCCCCCC---CCChHHHHHhhccCCCCe
Q 015890          104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSFQMTGVTHI----LVGPCSSKTL---HPDADWLEKTLETKPTPK  166 (398)
Q Consensus       104 ~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~---~~d~e~l~~~l~~~~~~~  166 (398)
                      .+++....          ...+++....+|++.............    .. |....-.   ..+.+.++..+.+.. ++
T Consensus       111 ~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-iA  188 (404)
T d1z7da1         111 TAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFG-PFAPQFSKVPYDDLEALEEELKDPN-VC  188 (404)
T ss_dssp             HHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEECTTCHHHHHHHHTSTT-EE
T ss_pred             HHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCC-CCCccccccccchHHHHHHHhcCCC-EE
Confidence            99887531          224788888888775543322211100    00 1111100   125677777776554 78


Q ss_pred             EEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEE
Q 015890          167 LVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA  243 (398)
Q Consensus       167 ~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~  243 (398)
                      +|+++..+...|.+ ++++.+++|.++|++||+++|+||++  |+..|........+....+.+++|.++-+++.+|.++
T Consensus       189 avi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~~v~  268 (404)
T d1z7da1         189 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVL  268 (404)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred             EEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEcccccCCCCCccccc
Confidence            88888767777875 57778999999999999999999999  5555544333322222224478899983337899999


Q ss_pred             ccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEE
Q 015890          244 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW  321 (398)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  321 (398)
                      ++   +++.+.+.......+++.++.+.+++.+.|+.  .++..++..+......+.+.+.+++.+.+.-+... |.++.
T Consensus       269 ~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~-Gl~~~  344 (404)
T d1z7da1         269 AN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGK-GLLCA  344 (404)
T ss_dssp             EC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEE-TTEEE
T ss_pred             ch---HHHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEee-CcEEE
Confidence            99   78877776666667788899999999998875  22445555555666677788888887765445455 45566


Q ss_pred             eeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          322 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       322 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.+........++..+++ ++||++.+.    ..+.||+.++. .+++++++++++|.++++++
T Consensus       345 i~~~~~~~~~~~~~~~l~-~~Gl~~~~~----~~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         345 IEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             EEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHH-hCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence            677654445667777775 899998764    35779998765 69999999999999999875

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.8e-22  Score=179.58  Aligned_cols=357  Identities=15%  Similarity=0.093  Sum_probs=252.4

Q ss_pred             ccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcC
Q 015890           13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENK   86 (398)
Q Consensus        13 ~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~   86 (398)
                      +.|.+.+.-+.+.....++-++|.-..|.  .+|.+++++...+.+.-.-+|      +-.....++++...+..++.++
T Consensus         9 ~~D~ei~~~i~~e~~rq~~~i~LiaSEN~--~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~   86 (416)
T d1dfoa_           9 DYDAELWQAMEQEKVRQEEHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG   86 (416)
T ss_dssp             HHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCHHHHHHHHHHHHHHHcCceEecCccc--CCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC
Confidence            45556666666666666789999877766  479999998877754222223      2223335555555677777788


Q ss_pred             CCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH-----HhcCcEEEEeccCCCCCCCCChHHHHHhhcc
Q 015890           87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus        87 ~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      ....+|-. .|++.|+..++.++++|||+|+..+..+.++...-     .....+.+.+ ++++.+ .+|.|.+++..+.
T Consensus        87 a~~anVqp-~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~-~IDyd~l~~~a~~  163 (416)
T d1dfoa_          87 ADYANVQP-HSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPY-GIDATG-HIDYADLEKQAKE  163 (416)
T ss_dssp             CSEEECCC-SSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEE-CBCSSS-SBCHHHHHHHHHH
T ss_pred             CCcceeec-ccCccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEec-ccCCcc-CccHHHHHHHHHH
Confidence            76666665 55669999999999999999999998887765422     2223577778 777654 5999999999885


Q ss_pred             CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcccccccCCCcce
Q 015890          162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       162 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      .. |++|++....+  ...+|   ++++.++|++.|.++++|.+|   +...+.-..+..+. +++++|.+|+|  +|.|
T Consensus       164 ~k-PklIi~G~S~y--~r~~d---~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~a-Dvvt~tThKtl--rGPr  234 (416)
T d1dfoa_         164 HK-PKMIIGGFSAY--SGVVD---WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHA-HVVTTTTHKTL--AGPR  234 (416)
T ss_dssp             HC-CSEEEEECSSC--CSCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTS-SEEEEESSSTT--CCCS
T ss_pred             hc-cceEEeccccc--ccccC---HHHHHHHHHhcCceEEcchhhhhcceeccccCCccccc-ceeeeehhhcc--cCCC
Confidence            54 69999885443  35677   899999999999999999999   44444444444443 58899999998  5888


Q ss_pred             eEEEEccCCcHHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc
Q 015890          239 VGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG  316 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  316 (398)
                      .|.+..+++.+++.+++.... .....++.....++.+.++.+ ..+.+.++.+++.++++.|.+.|.+.|...+.+...
T Consensus       235 ggiI~~~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTd  314 (416)
T d1dfoa_         235 GGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTD  314 (416)
T ss_dssp             CEEEEESSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred             ceEEEeccchHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCC
Confidence            899998754367778776543 333344445555555555554 446678999999999999999999988844445555


Q ss_pred             cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC------CCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Q 015890          317 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ...+++++.....+..+... +|++.||.+.-...+      ..+..|||+...     ..++|+.+..+.|.++++..
T Consensus       315 nHlvlvdl~~~~~~G~~a~~-~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~  392 (416)
T d1dfoa_         315 NHLFLVDLVDKNLTGKEADA-ALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSI  392 (416)
T ss_dssp             SSEEEEECGGGTCCHHHHHH-HHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             CceeEEEecccCCCHHHHHH-HHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHcC
Confidence            67788888654445555555 557899998533322      125689999433     47789999999998888653

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.91  E-value=1.1e-23  Score=189.53  Aligned_cols=319  Identities=13%  Similarity=0.076  Sum_probs=196.5

Q ss_pred             ccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEE
Q 015890           38 GVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV  117 (398)
Q Consensus        38 g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl  117 (398)
                      +++..+++|++++|+.+..... ..+|++.....++|+.+++++    |.++++|++|+|+|++++.++..+..++++++
T Consensus         6 nd~~~g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~----g~~~~~v~~tsggtean~~a~~~~~~~~~~~~   80 (340)
T d1svva_           6 NDYSVGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL----ERPDADVHFISGGTQTNLIACSLALRPWEAVI   80 (340)
T ss_dssp             CSCSSCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH----TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEE
T ss_pred             cCCCCCCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHHHHHhhhccccc
Confidence            4677788999999999876553 456766666677777777776    77888999999999999999999999999999


Q ss_pred             EeCCCCcChhhH--HHhcCcEEEEeccCCCCCCCCChHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          118 MFAPYYFNSYMS--FQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       118 ~~~p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      +..+.|..+...  ....+...... .... . ..+.+.......    .......+++....|+.|.+.+.+++..+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (340)
T d1svva_          81 ATQLGHISTHETGAIEATGHKVVTA-PCPD-G-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISA  157 (340)
T ss_dssp             EETTSHHHHSSTTHHHHTTCCEEEE-CCTT-S-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHH
T ss_pred             cccccceeeeecccccccceeeeec-cccc-c-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhc
Confidence            998888654432  22333333333 2221 1 123333222222    1221344555555566778888888999999


Q ss_pred             HHHHcCCEEEEeece-e---ccCCCccccc--cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh--hccCC
Q 015890          192 LCKAAGSWLVVDNTY-F---MYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV--QDNIP  263 (398)
Q Consensus       192 l~~~~~~~livDe~~-~---~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~--~~~~~  263 (398)
                      .|+++|.++++|+++ .   ..........  .....+...+..|..+  +...++.....   .........  .....
T Consensus       158 ~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~  232 (340)
T d1svva_         158 SCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILND---ALKPNARHLIKQRGAL  232 (340)
T ss_dssp             HHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSG---GGCTTHHHHHHHTTCC
T ss_pred             ccccccceeeeeccceeeeecccccccccccccccceeeecCCccccc--cccccccccch---hhhhhhhhhcccccCc
Confidence            999999999999999 2   1111111111  1112244444455443  33345554442   222222211  11122


Q ss_pred             CCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcC
Q 015890          264 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG  343 (398)
Q Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g  343 (398)
                      ........+++...++.  .......+....++.++.+.|+..+. .+..|..++++++.++.      +...+|+ +++
T Consensus       233 ~~~~~~~~aa~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~p~~~~~v~~~~~~------~~~~~l~-~~~  302 (340)
T d1svva_         233 MAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGLEACGI-RLAWPSASNQLFPILEN------TMIAELN-NDF  302 (340)
T ss_dssp             CTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEECBEEEH------HHHHHHT-TTE
T ss_pred             cchhhHHHHHHHHHhhh--hHHHHHHHHHHHHHhhhHHHHhcCCC-eeecCCCceEEEEeCCH------HHHHHHH-Hhh
Confidence            22233333444444443  33455667778888889999988776 65556558888887752      4555565 333


Q ss_pred             eEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          344 VVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       344 i~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      +..........++.||++++. .|++|+++++++|++
T Consensus       303 ~~~~~~~~~~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         303 DMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             ECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hhhcccccCCCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            322111112346789999887 899999999999876

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-22  Score=187.20  Aligned_cols=332  Identities=12%  Similarity=0.097  Sum_probs=223.4

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~-~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+....... ....    ...+++.+.+..+  .+.+.+++++++|+
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~v~~~~sGseA~  111 (404)
T d2byla1          38 VEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNV----LGEYEEYITKLFN--YHKVLPMNTGVEAG  111 (404)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTEEESS----HHHHHHHHHHHHT--CSEEEEESSHHHHH
T ss_pred             CCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccccccch----HHHHHHhhhhccc--ccccccccCccccc
Confidence            4789999999864  3343 6899999999999764322111 2222    2233334433333  46799999999999


Q ss_pred             HHHHHHhcc----------CCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCCCChHHHHHhh
Q 015890          103 VNIVLTLCD----------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTL  159 (398)
Q Consensus       103 ~~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~l  159 (398)
                      ..+++....          ...+|+....+|++..........             .+..+ |      ..|++.+++.+
T Consensus       112 e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~-p------~~d~~~l~~~l  184 (404)
T d2byla1         112 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-P------YNDLPALERAL  184 (404)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEE-C------TTCHHHHHHHH
T ss_pred             hhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEe-c------ccCHHHHHHhc
Confidence            999988641          224788888888775433322211             12222 1      13789999999


Q ss_pred             ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCc
Q 015890          160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMG  236 (398)
Q Consensus       160 ~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  236 (398)
                      .++. +.+|+++..+...|. .++++.+++|.++|++||+++|+||++  |+..|........+....+.+++|.++.++
T Consensus       185 ~~~~-iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~~~gK~l~gG~  263 (404)
T d2byla1         185 QDPN-VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGL  263 (404)
T ss_dssp             TSTT-EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTS
T ss_pred             CCCC-eEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEEEECchhhCCC
Confidence            8654 788888866776775 567889999999999999999999999  656665443332222222338889998333


Q ss_pred             ceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCC--CccccC
Q 015890          237 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGG  314 (398)
Q Consensus       237 ~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~  314 (398)
                      +++|.++++   +++.+.+.......+++.++.+.+++.+.|+..++  ++..++..+...++.+.|.++..  +.-+..
T Consensus       264 ~p~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~i~~vRg  338 (404)
T d2byla1         264 YPVSAVLCD---DDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTAVRG  338 (404)
T ss_dssp             SCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHTSCTTTEEEEEE
T ss_pred             ccceeeeec---hhhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHh--cCchhhhhHhhHHHHHHHHhhccccceeeee
Confidence            899999999   78877776666667788899999999999985221  22333444445555655554432  122233


Q ss_pred             CccEEEEeeCCCC-CCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          315 EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       315 ~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      . |++..+.+... .....++..+++ ++||++.+.    ..+.||+++.. .+++++++++++|.+++++
T Consensus       339 ~-Gl~~~i~~~~~~~~~~~~~~~~l~-~~Gvl~~~~----~~~~i~l~PpL~it~~~id~~~~~l~~al~~  403 (404)
T d2byla1         339 K-GLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS  403 (404)
T ss_dssp             E-TTEEEEEECCCSSCCHHHHHHHHH-HTTEECEEE----ETTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             c-ccEEEEEEecCCchhHHHHHHHHH-hCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHc
Confidence            3 44444555332 235667888776 899999763    25689999776 7999999999999999875

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=6.1e-23  Score=189.43  Aligned_cols=321  Identities=13%  Similarity=0.038  Sum_probs=215.0

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcC----CCCCcEEEecChHHHHHHHHHHhc---cCC
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLC---DAG  113 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~----~~~~~v~~~~g~t~a~~~~~~~l~---~~g  113 (398)
                      |.+.|++|++||...    ...++  ++.+.++.+.+.+.+++.++    .+++.|++++|+|++++.++.++.   ++|
T Consensus        11 P~~v~~~V~~Am~~~----~~~hr--~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~g   84 (382)
T d2bkwa1          11 PIILSGAVQKALDVP----SLGHT--SPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPN   84 (382)
T ss_dssp             SCCCCHHHHHTTSCC----CCCTT--SHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSC
T ss_pred             CCCCCHHHHHHhCcc----cCCCC--cHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence            556788998877432    12222  22233344444444444444    356789999999999999999986   578


Q ss_pred             CEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015890          114 DSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD  191 (398)
Q Consensus       114 d~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  191 (398)
                      |+|++...++++  +...++..|.....+ ...+.+...+.+.+++.+...+ ++++++++.+|.||...+   +..+.+
T Consensus        85 d~vlv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~tg~~~~---~~~~~~  159 (382)
T d2bkwa1          85 KNVLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKIGESVPLELITEKLSQNS-YGAVTVTHVDTSTAVLSD---LKAISQ  159 (382)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHTTCEEEEE-CCSSTTSCCCHHHHHHHHHHSC-CSEEEEESEETTTTEECC---HHHHHH
T ss_pred             CceEEEEechhhhhhhhhccccccccccc-cccCCCCccchhHHHHHhhhcc-chheeeeecccccccccc---chhhhh
Confidence            999999888766  345567778877776 5445555678888888887544 699999999999999999   777777


Q ss_pred             HHHHc--CCEEEEeece-eccCCCccccccCCcEEEEccccccc-CCCcceeEEEEccCCcHHHHHHHHH----------
Q 015890          192 LCKAA--GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK----------  257 (398)
Q Consensus       192 l~~~~--~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~l~~----------  257 (398)
                      .|+++  ++++++|.++ ++...  ......+.++++.|.+|++ |++|  +|+++.+   +++++.+..          
T Consensus       160 ~~~~~~~~~~~~vDa~qs~g~~p--id~~~~giD~~~~s~~K~l~gP~G--~g~l~vs---~~~~~~~~~~~~~~~~~~~  232 (382)
T d2bkwa1         160 AIKQTSPETFFVVDAVCSIGCEE--FEFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYALNDSKNGHVHGY  232 (382)
T ss_dssp             HHHHHCTTSEEEEECTTTTTTSC--CCTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHHTCHHHHCCCSCS
T ss_pred             hccccccceeeeeeccccccccc--ccccccCeeEEeecccccCcCCCc--hhhhhcc---HHHHhhhhhcccCCCcccc
Confidence            77665  5999999998 65533  2333344558899999999 5566  6888888   565544321          


Q ss_pred             ----------------hhccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCcccc--CC---
Q 015890          258 ----------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKG--GE---  315 (398)
Q Consensus       258 ----------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~---  315 (398)
                                      ....+.++++.....++..+|+... +.+++..++.+++++++++.+..........  +.   
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~  312 (382)
T d2bkwa1         233 FSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMS  312 (382)
T ss_dssp             TTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTB
T ss_pred             hhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhcc
Confidence                            1123456788888888888887522 3356666677777888888776543322221  11   


Q ss_pred             ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC-CCCCeEEEE-ecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          316 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-GCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      ....+.+.++    +..++...| +++||.+..|... -..+.+||+ ++. .++++++.+++.|......+
T Consensus       313 s~~v~~~~~~----~~~~~~~~L-~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L  379 (382)
T d2bkwa1         313 AHGLTAVYVA----DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL  379 (382)
T ss_dssp             CSSCEEEECS----CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred             CCcEEEEcCC----CHHHHHHHH-HHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            1122344554    356776655 6999999988653 245789999 665 45667777777775444433

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=2.3e-22  Score=184.39  Aligned_cols=329  Identities=14%  Similarity=0.120  Sum_probs=226.1

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|  ...++ -+|++.+++.+++.+...  . +..-..+.+..+++.+........+.+.+++++++|++
T Consensus        34 ~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e  110 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA--M-PQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANE  110 (387)
T ss_dssp             TTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC--C-CTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHH
T ss_pred             CCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhcc--c-ccccCCchHHHHHHHhhhhccccceeeccccCchHHHH
Confidence            478999999874  34454 589999999999876321  1 22222456666666665544444457999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc-------------EEEEeccCCCCCCCCChHHHHHhhccCCCCeEE
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTLETKPTPKLV  168 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v  168 (398)
                      .+++...  ....+|+....+|++....+.....             .+..+ |      ..|.+.|++.++++  +++|
T Consensus       111 ~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~-p------~~d~~~l~~~~~~~--iAav  181 (387)
T d1vefa1         111 AALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFI-P------YNDVEALKRAVDEE--TAAV  181 (387)
T ss_dssp             HHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEE-C------TTCHHHHHHHCCTT--EEEE
T ss_pred             HHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEe-C------CCCHHHHHHhcCCC--eEEE
Confidence            9999864  3346899999999886644433221             12222 2      12789999998765  5888


Q ss_pred             EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccCCCcceeEEEEcc
Q 015890          169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP  245 (398)
Q Consensus       169 ~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~  245 (398)
                      +++..+...|.. .+++.++++.++|++||+++|.||++  |+..|........+....+.+++|.++ .|+.++.++..
T Consensus       182 i~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~~gK~l~-gG~~~~~~~~~  260 (387)
T d1vefa1         182 ILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALG-GGVPLGVAVMR  260 (387)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-TTSSCEEEEEE
T ss_pred             EEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceeeecccCC-CCccccccccc
Confidence            888656667764 77889999999999999999999999  656664433222222222446789997 78889998888


Q ss_pred             CCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcc--ccCCccEEEEee
Q 015890          246 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWAR  323 (398)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~  323 (398)
                         +++.+.+.......+++.++.+.+++.+.|+..++  .+..++..+..+++.+.|+++....+  +... |.+..+.
T Consensus       261 ---~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~--~~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~-Gl~~~ie  334 (387)
T d1vefa1         261 ---EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGM-GLMVGLE  334 (387)
T ss_dssp             ---HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEE-TTEEEEE
T ss_pred             ---eeeeeccccCCccccCCCCcchhhhcccchhhccc--ccccchHhhhhHHHHHHHHhcCCCceEEEeec-ceEEEEE
Confidence               67777666656667788899999999999875221  23344555555666666665433122  2233 4556667


Q ss_pred             CCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          324 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       324 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +.+.  ....+.. ++.++|+.+.+.    .++.+|++++. .++++++++++++++++
T Consensus       335 ~~~~--~~~~~~~-~~~~~g~l~~~~----g~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         335 LKEK--AAPYIAR-LEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             ESSC--SHHHHHH-HHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EeCC--chHHHHH-HHHHCCCeEEec----CCCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence            7643  2344444 445788887664    35689999776 79999999999999876

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.90  E-value=4.3e-22  Score=184.08  Aligned_cols=325  Identities=13%  Similarity=0.097  Sum_probs=218.9

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCc-EEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~-v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      |...+++|++||.+..    .++  .+..+.++.+.+.+.++++.+++... |+++.|+|.+++.++.++..+|+++++.
T Consensus        25 P~~~~~~V~~Am~~~~----~~h--r~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~   98 (388)
T d2ch1a1          25 PSNCSKRVLTAMTNTV----LSN--FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA   98 (388)
T ss_dssp             SCCCCHHHHHHTTSCC----CCT--TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCHHHHHHhCcCC----CCC--CCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhcccccccccc
Confidence            5567899998875432    222  34445666666677777777876554 6667889999999999999999999998


Q ss_pred             CCCCcChh--hHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015890          120 APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG  197 (398)
Q Consensus       120 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~  197 (398)
                      ..++++..  ..++..+...+.+ ..++. ...+.+.+++...... ++++++++.+|.||...+   ++++.++|+++|
T Consensus        99 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~~t~tG~~~~---~~~i~~~~~~~~  172 (388)
T d2ch1a1          99 VNGIWAERAVEMSERYGADVRTI-EGPPD-RPFSLETLARAIELHQ-PKCLFLTHGDSSSGLLQP---LEGVGQICHQHD  172 (388)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCTT-SCCCHHHHHHHHHHHC-CSEEEEESEETTTTEECC---CTTHHHHHHHTT
T ss_pred             ccccccccchhhhhhhccccccc-ccccc-cccchhhhhhhhccCC-cceeeeeecccccccccc---hhhhcchhcccc
Confidence            88886643  4566778777766 44433 3457777777665433 599999999999999999   888999999999


Q ss_pred             CEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------------
Q 015890          198 SWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-----------------  259 (398)
Q Consensus       198 ~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~-----------------  259 (398)
                      .++++|.++ ++...  ......+.++++.|.+|+++. ...+|+++.+   +..++......                 
T Consensus       173 ~~~~vD~~ss~g~~p--id~~~~~~d~~~~s~~K~~~g-p~G~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (388)
T d2ch1a1         173 CLLIVDAVASLCGVP--FYMDKWEIDAVYTGAQKVLGA-PPGITPISIS---PKALDVIRNRRTKSKVFYWDLLLLGNYW  246 (388)
T ss_dssp             CEEEEECTTTBTTBC--CCTTTTTCCEEECCCC-CCCC-CSSCEEEEEC---HHHHHHHHTCSSCCSCGGGCHHHHHHHT
T ss_pred             ceeeeeeeecccccc--cchhccCceEEEEccccccCC-CCeEEEEecc---HHHHHhhhcccCccccccccchhhhhhh
Confidence            999999999 66433  333334556888999998852 2236777777   56555443211                 


Q ss_pred             ------ccCCCCcchHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHhccCCCCccc-cC--CccEEEEeeCCCCCC
Q 015890          260 ------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GG--EGAIYLWARLPEKHL  329 (398)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~  329 (398)
                            .....+.+.....++..+++... .......+............+...+..... .+  .....+.+.++++ .
T Consensus       247 ~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g-~  325 (388)
T d2ch1a1         247 GCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKG-V  325 (388)
T ss_dssp             TCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTT-C
T ss_pred             cccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECCCC-C
Confidence                  12334556666666666665311 112333333333333344444333321111 11  1233556777764 3


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCCCCCCeEEEE-ecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +..++...|++++||.+.+|..+...+.|||| ++. .+.|+++.++++|+++++..
T Consensus       326 ~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~  382 (388)
T d2ch1a1         326 DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT  382 (388)
T ss_dssp             CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhh
Confidence            67888888887889999999876667789999 666 57899999999999999884

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.90  E-value=5.4e-22  Score=182.65  Aligned_cols=322  Identities=16%  Similarity=0.116  Sum_probs=216.7

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHHHHHHHhccCCCEEEEe
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMF  119 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~  119 (398)
                      |.+.|++|++||....    .++  .+..+.++.+.+.+.++++++++. ..|++++|+|.+++.++.++..+|+++++.
T Consensus        26 P~~v~~~Vl~am~~~~----~~h--r~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~   99 (377)
T d1vjoa_          26 PSNAHPSVLQAMNVSP----VGH--LDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG   99 (377)
T ss_dssp             CCCCCHHHHHHHSSCC----CCT--TSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCCHHHHHHhCcCC----CCC--CCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhcccccccccee
Confidence            6667899998875432    322  344456677777777777778754 567778889999999999999999999998


Q ss_pred             CCCCcCh--hhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015890          120 APYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA  196 (398)
Q Consensus       120 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~-~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~  196 (398)
                      ...+++.  ...+...+.....+ ...... ..+.+..+.... ..  ++++++.+.+|.||.+.|   ++++.++|+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~v~~~~~~~~tg~~~~---i~~i~~~~~~~  172 (377)
T d1vjoa_         100 VAGYFGNRLVDMAGRYGADVRTI-SKPWGE-VFSLEELRTALETHR--PAILALVHAETSTGARQP---LEGVGELCREF  172 (377)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHC--CSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred             eechhhhhhhhhhhhhccccccc-ccCCCC-cccchhhhhhhhcCc--ceeeeeeeeeccceeeec---hhhhhhhhhhc
Confidence            8777553  33445556655555 333333 235555554444 44  488999988999999999   99999999999


Q ss_pred             CCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc---------------
Q 015890          197 GSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD---------------  260 (398)
Q Consensus       197 ~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~---------------  260 (398)
                      |.++++|.++ ++......  ...+.++++.|.+|.++.| ..+|+++.+   +..++.......               
T Consensus       173 g~~~~vDa~~~~g~~~~~~--~~~~~d~~~~s~~K~~~gp-~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (377)
T d1vjoa_         173 GTLLLVDTVTSLGGVPIFL--DAWGVDLAYSCSQKGLGCS-PGASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGKY  246 (377)
T ss_dssp             TCEEEEECTTTTTTSCCCT--TTTTCSEEECCSSSTTCSC-SSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHHH
T ss_pred             cceEEEecchhhhhhhhcc--cccccceeeecccccccCC-CEEEEecch---hhHHhhhhccCCCCcceeeccchhhhc
Confidence            9999999999 65533222  2334457888999988532 245777776   566554432211               


Q ss_pred             -----cCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCccccCC--ccEEEEeeCCCCCCChH
Q 015890          261 -----NIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPEKHLDDF  332 (398)
Q Consensus       261 -----~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  332 (398)
                           ....+++.....++..+... .....+...+..+++...+.+.+...+...+..+.  ....+.+.++++ .+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~-~~~~  325 (377)
T d1vjoa_         247 WGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDG-VDGK  325 (377)
T ss_dssp             HSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTT-CCHH
T ss_pred             cCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCC-CCHH
Confidence                 12223344444443333332 11224566666777778888888776653322221  123445566653 4788


Q ss_pred             HHHHHHHHhcCeEEecCCCCCCCCeEEEE-ecC-CCHHHHHHHHHHHHHHHH
Q 015890          333 EVVRWLAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       333 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                      +++.+|++++||.+..|..+...+.|||| ++. .+.+|+++++++|+++++
T Consensus       326 ~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         326 AVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             HHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            99998888889999999877667899999 465 578899999999998864

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=8.4e-22  Score=182.96  Aligned_cols=343  Identities=12%  Similarity=0.054  Sum_probs=220.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.++||..|.  ..++ -+|++.+|+.+++.+.....  ......+....+++.+....+.+.+.+.+++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e  117 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM--FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVE  117 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCC--CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred             CCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcc--cCCccchHHHHHHHHHHhhhccCcceeeeccccccchh
Confidence            4689999998774  4444 68999999999887632111  11111233344455555544555678999999999999


Q ss_pred             HHHHHhc-------cCCCEEEEeCCCCcChhhHHHhcC--------------cEEEEeccCC--CCCCCC---ChHHHHH
Q 015890          104 NIVLTLC-------DAGDSVVMFAPYYFNSYMSFQMTG--------------VTHILVGPCS--SKTLHP---DADWLEK  157 (398)
Q Consensus       104 ~~~~~l~-------~~gd~Vl~~~p~~~~~~~~~~~~g--------------~~~~~~~~~~--~~~~~~---d~e~l~~  157 (398)
                      .+++...       ....+|+....+|++....+....              ...... |..  ......   +++.+++
T Consensus       118 ~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  196 (429)
T d1s0aa_         118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFAR  196 (429)
T ss_dssp             HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHH
T ss_pred             hhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccc-cccccccccccchhhhhhhhh
Confidence            9988764       223589999999988654332221              111112 111  111112   3455555


Q ss_pred             hhc-cCCCCeEEEEeCCC-CCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEccccccc
Q 015890          158 TLE-TKPTPKLVSVVNPG-NPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAY  232 (398)
Q Consensus       158 ~l~-~~~~~~~v~i~~p~-nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~  232 (398)
                      .+. ....+.+|+++... +..|. .+|++.+++|.++|++||+++|+||++  |+..|........+....+.+++|.+
T Consensus       197 ~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l  276 (429)
T d1s0aa_         197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKAL  276 (429)
T ss_dssp             HHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGG
T ss_pred             hhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceeccccccccccc
Confidence            544 23347888888543 55555 578999999999999999999999999  65666544333322223344778999


Q ss_pred             CCCcceeEEEEccCCcHHHHHHHHHh-----hccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhcc
Q 015890          233 GMMGWRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       233 ~~~G~r~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      +-+++.+|.++++   +++.+.+...     ....+++.++.+.+++.+.|+..  ++..++..+.-...++.+. .|.+
T Consensus       277 ~gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~-~l~~  352 (429)
T d1s0aa_         277 TGGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLA-PARD  352 (429)
T ss_dssp             GTSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHG-GGGG
T ss_pred             ccccccccchhhH---HHHHhccCCCCCcceeecCCCCCCcccchhhhccccccccccccchhhHHHHHHHHHHH-Hhcc
Confidence            7455899999999   7888877542     23457788999999999999852  2333333333333333332 2334


Q ss_pred             CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          306 LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .+.+.-+... |.++.+++.... ....+...++ ++|+++.+.     .+.||+++.. .+++|+++++++|.+++++.
T Consensus       353 ~~~v~~vrg~-Gl~~~~e~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~i~~~Ppl~it~~eid~~~~~l~~al~e~  424 (429)
T d1s0aa_         353 AEMVADVRVL-GAIGVVETTHPV-NMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             CTTEEEEEEE-TTEEEEEESSCB-CHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred             CCceEEEeec-ccEEEEEecCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCcCCCHHHHHHHHHHHHHHHHhh
Confidence            4443323344 556666765432 5667777665 889999773     4689999766 79999999999999988664

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.1e-21  Score=183.09  Aligned_cols=351  Identities=12%  Similarity=-0.023  Sum_probs=243.8

Q ss_pred             cCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCC-----cEEEecChHHHH
Q 015890           28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-----SVMVTAGANQAF  102 (398)
Q Consensus        28 ~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~-----~v~~~~g~t~a~  102 (398)
                      +|++-.+|....+.+ .+|++.+.+.+.+..+ ...+...+...++++.+.+++.++++.+..     .-.+|+|+|+|+
T Consensus        51 dg~~~~n~asf~~t~-~~~~~~~l~~~~~~~N-~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgSeA~  128 (450)
T d1pmma_          51 DGNARQNLATFCQTW-DDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEAC  128 (450)
T ss_dssp             SCCGGGBCSCCSCCC-CCHHHHHHHHHTTTCB-TTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHHHHH
T ss_pred             CCCccccccccccCC-CCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchHHHH
Confidence            566667777665444 4688888888887654 344444566788999999999999887432     258999999999


Q ss_pred             HHHHHHhcc-----------CC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEE
Q 015890          103 VNIVLTLCD-----------AG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV  170 (398)
Q Consensus       103 ~~~~~~l~~-----------~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i  170 (398)
                      ..++.+...           .. ..++++...|.++..+++.+|+++..+ +.++.++.+|++.|++++++++  .+|+.
T Consensus       129 ~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v-~~~~~~~~~d~~~L~~~i~~~t--~~Vv~  205 (450)
T d1pmma_         129 MLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIEACDENT--IGVVP  205 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHHHCCTTE--EEEEC
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEe-eecCCCCcCcHHHHHHHhhhCc--eEEEe
Confidence            998887532           12 357888889999999999999999999 8877778899999999999876  88998


Q ss_pred             eCCCCCCccCCCHHHHHHHHH---HHHHcCCEEEEeece----eccCCC--ccccccCCcEEEEcccccccCCCcceeEE
Q 015890          171 VNPGNPSGTYIPERLLKRISD---LCKAAGSWLVVDNTY----FMYDGR--KHCCVEGDHVVNLFSFSKAYGMMGWRVGY  241 (398)
Q Consensus       171 ~~p~nptG~~~~~~~l~~i~~---l~~~~~~~livDe~~----~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  241 (398)
                      +.+++.||.+-|.+.+..+++   .|+++|++++||.++    .++...  .........+.+..|.||+++ ....+||
T Consensus       206 t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~~~-~p~g~g~  284 (450)
T d1pmma_         206 TFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGL-APLGCGW  284 (450)
T ss_dssp             BBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCSSCEE
T ss_pred             eeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhccC-CCCCeeE
Confidence            999999999999665555544   367789999999998    122221  111112345577889999875 4456899


Q ss_pred             EEccCCcHHHHHHHHHhh----------ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015890          242 IAYPSEVEGFATQLLKVQ----------DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA  310 (398)
Q Consensus       242 i~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  310 (398)
                      ++.++  +..........          ....++.+.....+....+.. +.+.+++..++..++++++.+.|++.+.+.
T Consensus       285 l~~r~--~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~e  362 (450)
T d1pmma_         285 VIWRD--EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYE  362 (450)
T ss_dssp             EEESS--GGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEE
T ss_pred             EEecC--hhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            99886  33221111000          011122233333333333332 456788999999999999999999988766


Q ss_pred             cccC----CccEEEEeeCCCC---CCChHHHHHHHHHhcCeEEecCCCC---CCCCeEEEEecC-CCHHHHHHHHHHHHH
Q 015890          311 VKGG----EGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRR  379 (398)
Q Consensus       311 ~~~~----~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~  379 (398)
                      +..+    .+...+.+++...   ..+..++...| +++|..+......   .....+|+.+.. .+.++++++++.|++
T Consensus       363 l~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L-~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~~  441 (450)
T d1pmma_         363 FICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA  441 (450)
T ss_dssp             EEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHH-HHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHHH
Confidence            6532    2233455565322   13456777766 5889766322111   123479999988 789999999999999


Q ss_pred             HHHHHhcc
Q 015890          380 GLEELVKD  387 (398)
Q Consensus       380 ~~~~~~~~  387 (398)
                      +++.+.++
T Consensus       442 ~v~~l~~~  449 (450)
T d1pmma_         442 SLKYLSDH  449 (450)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99998753

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.90  E-value=1.2e-21  Score=179.28  Aligned_cols=318  Identities=14%  Similarity=0.095  Sum_probs=205.0

Q ss_pred             CCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhhhcCCCCCc--EEEecChHHHHHHHHHHhccCCCEE
Q 015890           41 YWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDSV  116 (398)
Q Consensus        41 ~~~~~~~v~~a~~~~~~~~~~~~y~--~~~~~~~~~~~l~~~l~~~~~~~~~~--v~~~~g~t~a~~~~~~~l~~~gd~V  116 (398)
                      |.+.|+.|++|+.+..    .+.++  ...-..++|+.+++++    +++++.  +++++|+|++++.++.++..+++.+
T Consensus         8 P~~~~~~V~~A~~~~~----~~~~~~~~~~~~~~~r~~l~~l~----~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~   79 (361)
T d1m32a_           8 PLTTSRTVKEAMLFDS----CTWDDDYNIGVVEQIRQQLTALA----TASEGYTSVLLQGSGSYAVEAVLGSALGPQDKV   79 (361)
T ss_dssp             SCCCCHHHHHTTCCCC----CTTSHHHHTTTHHHHHHHHHHHH----CSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCE
T ss_pred             CCCCCHHHHHHhhhhc----cCCCcHHHHHHHHHHHHHHHHHh----CCCCCCEEEEECCCHHHHHHHHHHHhhhhcccc
Confidence            6677888888764432    22221  1233455555555555    787654  7788899999999999999888888


Q ss_pred             EEeCCCCcC--hhhHHHhcCcEEEEeccCCCCC-CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015890          117 VMFAPYYFN--SYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC  193 (398)
Q Consensus       117 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~  193 (398)
                      ++....++.  .....+..+.....+ ..+... ...+.+.......++  ++++.+++.+|.||...|   +++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~tG~~~~---i~~i~~~~  153 (361)
T d1m32a_          80 LIVSNGAYGARMVEMAGLMGIAHHAY-DCGEVARPDVQAIDAILNADPT--ISHIAMVHSETTTGMLNP---IDEVGALA  153 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHTCCEEEE-ECCTTSCCCHHHHHHHHHHCTT--CCEEEEESEETTTTEECC---HHHHHHHH
T ss_pred             ceeeehhhhhhHHHHhhhhhcccccc-cccccCCccchhhHHHHHhccC--ccceEEEeeecccccchh---hhhhhhhh
Confidence            777666543  223344445444443 232222 112233334444444  599999999999999999   99999999


Q ss_pred             HHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccC-CCcceeEEEEccCCcHHHHHHH----------------
Q 015890          194 KAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQL----------------  255 (398)
Q Consensus       194 ~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~l----------------  255 (398)
                      +++|+++++|.++ ++....  .....+.+++++|.+|+++ ++|  +|+++.+   ++..+..                
T Consensus       154 ~~~g~~~~vDa~qs~G~~~~--d~~~~~~D~~~~s~~K~l~gp~G--~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T d1m32a_         154 HRYGKTYIVDAMSSFGGIPM--DIAALHIDYLISSANKCIQGVPG--FAFVIAR---EQKLAACKGHSRSLSLDLYAQWR  226 (361)
T ss_dssp             HHHTCEEEEECTTTTTTSCC--CTTTTTCSEEEEESSSTTCCCSS--EEEEEEE---HHHHTTCTTCCSCSTTCHHHHHH
T ss_pred             cccceeeEeecccccCcccc--cccccccceEEeeecccccCCCC--ceEEEec---hhhhhhhccccccccccchhhhc
Confidence            9999999999999 655332  2233455688999999884 445  6777777   4433222                


Q ss_pred             --HHhhccCCCCcchHHHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHHHHhccCCCCccccC--CccEEEEeeCCCC-C
Q 015890          256 --LKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEK-H  328 (398)
Q Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~-~  328 (398)
                        .........+++.....+....+....  .......++.....+.+.+.++..+......+  .....+.+.+++. .
T Consensus       227 ~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~  306 (361)
T d1m32a_         227 CMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQ  306 (361)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTT
T ss_pred             cccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCCC
Confidence              112223445667777777766665411  22344455566667777788777765322221  1123345566543 2


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-CCCHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-GLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~l~~~~  381 (398)
                      .+..+++..| .++||.+.+|... .++.+|||+. ..+++|+++++++|++++
T Consensus       307 ~~~~~~~~~l-~~~gi~i~~G~~~-~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         307 YRFSEFYRRL-KEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             CCHHHHHHHH-HHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHH-HHCCcEEECCCcC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            4567777776 5899999887533 4678999954 478999999999998874

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.90  E-value=2.4e-22  Score=187.50  Aligned_cols=348  Identities=12%  Similarity=0.088  Sum_probs=225.6

Q ss_pred             HcCCCeEEcCCc--cCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|  ...++ -+|++.+|+.+++.+..   |.......+....+++.|.+...-..+.+.+++++++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e  114 (431)
T d1zoda1          38 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD---HLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNE  114 (431)
T ss_dssp             TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCC---CCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHH
T ss_pred             CCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhcc---ccccccccHHHHHHHHHHHHhCCcccceeeecccccchHH
Confidence            468999999876  44554 57999999999987632   1111222334456677666655444578999999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCc------------EEEEeccCCCC--------CCCC---ChHHHHHh
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK--------TLHP---DADWLEKT  158 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~--------~~~~---d~e~l~~~  158 (398)
                      .+++...  ...++|+....+|++....+-..+.            ....+ +....        ....   +++.+...
T Consensus       115 ~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (431)
T d1zoda1         115 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAI-PAPFTYRPRFERNGAYDYLAELDYAFDL  193 (431)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEE-CCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceee-eeecccccccccccchhhhhhHHHHHHH
Confidence            9999863  3447899999999987654433221            11222 11100        0000   12333333


Q ss_pred             hc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeece--eccCCCccccccCCcEEEEcccccccC
Q 015890          159 LE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTY--FMYDGRKHCCVEGDHVVNLFSFSKAYG  233 (398)
Q Consensus       159 l~--~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~  233 (398)
                      +.  ....+++|+++..+...|. .+|++.+++|.++|++||+++|.||++  ++..|........+....+.+++|.++
T Consensus       194 ~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~gK~l~  273 (431)
T d1zoda1         194 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG  273 (431)
T ss_dssp             HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred             HHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhccccccc
Confidence            32  2233788888866665666 468889999999999999999999999  566665443332222222447789997


Q ss_pred             CCcceeEEEEccCCcHHHHHHHHHh--hccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015890          234 MMGWRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEG  309 (398)
Q Consensus       234 ~~G~r~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  309 (398)
                       .|+.++.+++.   ++..+.....  ....+++.++.+.+++.+.++.  .++.+++..+.-.+..+.+.+.+.+.+.+
T Consensus       274 -gG~p~~av~~~---~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i  349 (431)
T d1zoda1         274 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCI  349 (431)
T ss_dssp             -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             -cccccceeeee---ecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCe
Confidence             78889998888   6666655432  2345677888888888888774  22445555555555667777777777764


Q ss_pred             ccccCCccEEEEeeCCC--CC-----CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          310 AVKGGEGAIYLWARLPE--KH-----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       310 ~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      .-+... |.++.+.+..  ..     .....+...++ ++|+...........+.||+++.. .+++++++++++|.+++
T Consensus       350 ~~vrG~-Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~-~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l~~al  427 (431)
T d1zoda1         350 GDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAI  427 (431)
T ss_dssp             EEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEeec-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            444455 4444344311  00     11345666665 789864322222246789999876 79999999999999999


Q ss_pred             HHH
Q 015890          382 EEL  384 (398)
Q Consensus       382 ~~~  384 (398)
                      +++
T Consensus       428 ~~v  430 (431)
T d1zoda1         428 ERA  430 (431)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.90  E-value=9.3e-22  Score=182.97  Aligned_cols=334  Identities=13%  Similarity=0.059  Sum_probs=214.2

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV  103 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~  103 (398)
                      .+|+.|+||..|.  ..++ .+|++.+|+.+++.+.... . ..   ......+++.+....+ ..+.+.+++++++|++
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~-~-~~---~~~~~~la~~~~~~~~-~~~~v~f~~sGseA~e  122 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF-G-AP---CALENVLAEMVNDAVP-SIEMVRFVNSGTEACM  122 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCC-S-SC---CHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred             CCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCcc-c-cc---hhHHHHHHHHHHhhCC-ccccccccCCcHHHHH
Confidence            4689999998764  3343 5899999999999763221 1 11   2345556666655443 2467899999999999


Q ss_pred             HHHHHhc--cCCCEEEEeCCCCcChhhHHHh--------cCc------------EEEEeccCCCCCCCCChHHHHHhhcc
Q 015890          104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM--------TGV------------THILVGPCSSKTLHPDADWLEKTLET  161 (398)
Q Consensus       104 ~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~--------~g~------------~~~~~~~~~~~~~~~d~e~l~~~l~~  161 (398)
                      .+++...  ....+|+....+|++....+..        .+.            +...+       -.-|++.+++.+++
T Consensus       123 ~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~le~~~~~  195 (427)
T d2gsaa_         123 AVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-------PYNDLEAVKALFAE  195 (427)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEE-------CTTCHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceecc-------CcchHHHHHHHHHh
Confidence            9999764  3447899999999886533211        111            11111       02388999999984


Q ss_pred             C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEeeceec-cCCCccccccCCcEEEEcccccccCCCcce
Q 015890          162 K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWR  238 (398)
Q Consensus       162 ~-~~~~~v~i~~p~nptG~-~~~~~~l~~i~~l~~~~~~~livDe~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  238 (398)
                      . ..+++|+++..+...|. .+|++.+++|.++|++||+++|+||++.+ ..|........+....+-+++|.+| .|+.
T Consensus       196 ~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~g~~~~~~~~gi~PDi~~~gK~lg-gG~p  274 (427)
T d2gsaa_         196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTTLGKIIG-GGLP  274 (427)
T ss_dssp             STTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTCHHHHTTCCCSEEEECGGGG-TTSC
T ss_pred             CCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccceecccchHHhcCCCHHHHhhhhccC-CCcc
Confidence            2 33678888866666676 46788999999999999999999999922 2332222211111122336789997 7899


Q ss_pred             eEEEEccCCcHHHHHHHHH---hhccCCCCcchHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 015890          239 VGYIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKG  313 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  313 (398)
                      +|.++++   +++.+.+..   .....+++.++.+.+++.+.|+..  .+..++..+.-.+.++.+.+..++.+......
T Consensus       275 ~~a~~~~---~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~  351 (427)
T d2gsaa_         275 VGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGG  351 (427)
T ss_dssp             CEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             eeeeeeh---HHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCcEEc
Confidence            9999988   777776643   223456788999999999988752  23444444445555666666666666533332


Q ss_pred             CCccEEEEeeCCCCCC--------Ch---HHHHHHHHHhcCeEEecCCCCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 015890          314 GEGAIYLWARLPEKHL--------DD---FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       314 ~~~~~~~~~~~~~~~~--------~~---~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~~~  382 (398)
                      ..++++-+.-......        +.   ..+...++ ++||++.|+..    ..+-+++. .+++|+++++++|+++++
T Consensus       352 ~~ggm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll-~~Gv~l~p~~~----~~~~~~l~-~Te~dId~~l~al~~al~  425 (427)
T d2gsaa_         352 QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAARTVMS  425 (427)
T ss_dssp             EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHHHHHT
T ss_pred             ccCCeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHH-HCCEEECCCCC----cceeCCCC-CCHHHHHHHHHHHHHHHH
Confidence            3224432211111111        11   23445565 78999987531    22224444 599999999999999986


Q ss_pred             H
Q 015890          383 E  383 (398)
Q Consensus       383 ~  383 (398)
                      +
T Consensus       426 ~  426 (427)
T d2gsaa_         426 A  426 (427)
T ss_dssp             C
T ss_pred             h
Confidence            5

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.90  E-value=1.4e-22  Score=188.33  Aligned_cols=336  Identities=11%  Similarity=0.032  Sum_probs=217.4

Q ss_pred             HHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCC-CC--CCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHH
Q 015890           26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK-YG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF  102 (398)
Q Consensus        26 ~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~-y~--~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~  102 (398)
                      +.-.++++.|+.+.... .|..+.+++.+.+.+..... ..  ......++.+.+++.++++.|+++++|++++++|+++
T Consensus        22 F~~~~~~iYLd~as~g~-~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T~~~  100 (404)
T d1qz9a_          22 FALPEGVIYLDGNSLGA-RPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINL  100 (404)
T ss_dssp             BCCCTTCEECCTTTSCC-CBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHH
T ss_pred             CCCCCCCEEcCCccccc-CCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCchHHH
Confidence            33346788888876443 47889999988875532111 10  1122345556667777777799999999999999999


Q ss_pred             HHHHHHh------ccCCCEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCC
Q 015890          103 VNIVLTL------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP  176 (398)
Q Consensus       103 ~~~~~~l------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~np  176 (398)
                      +.++...      ..+++.|++.+..|++....+...+.++..+ +.+.. ...+.+.+++.+++++  ++|++.+.+|.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~i~~~T--~lV~i~~v~~~  176 (404)
T d1qz9a_         101 FKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQ-GYTLR-LVDSPEELPQAIDQDT--AVVMLTHVNYK  176 (404)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCS-SCEEE-EESSGGGHHHHCSTTE--EEEEEESBCTT
T ss_pred             HHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeee-ceecc-ccccchhHHHhcCCCc--eEEEEeccccc
Confidence            9877643      2578889988888876554444444433333 22222 2457889999999876  99999999999


Q ss_pred             CccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH
Q 015890          177 SGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL  255 (398)
Q Consensus       177 tG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l  255 (398)
                      ||..+|   +++|+++|+++|+.+++|.++ ++........  .+.++++.|.+|+++.+...+|+++.+.   ...+.+
T Consensus       177 tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~--~~~d~~~~s~~K~~~~~~g~~g~~~~~~---~~~~~~  248 (404)
T d1qz9a_         177 TGYMHD---MQALTALSHECGALAIWDLAHSAGAVPVDLHQ--AGADYAIGCTYKYLNGGPGSQAFVWVSP---QLCDLV  248 (404)
T ss_dssp             TCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCCCHHH--HTCSEEEECSSSTTCCCTTCCCEEEECT---TTTTTS
T ss_pred             ccceec---HHHHhccccccccceeEEeecccccccccccc--ccceEEEEechhhcccCCceEEEEEech---hhhhhC
Confidence            999999   999999999999999999999 5543332222  2344778899998853333457777663   332222


Q ss_pred             HHh-----------------------hccCCCCcchHHHHHHHHHhc---C-CchHHHHHHHHHHHHHHHHHHHhccCCC
Q 015890          256 LKV-----------------------QDNIPICASIISQHLALYSLQ---T-GPEWVTERVKDLVRNREIIREALSPLGE  308 (398)
Q Consensus       256 ~~~-----------------------~~~~~~~~~~~~~~~~~~~l~---~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~  308 (398)
                      ...                       ......+.+..........+.   . +...+++...........+.+.+...++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~  328 (404)
T d1qz9a_         249 PQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHE  328 (404)
T ss_dssp             CCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             CccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCC
Confidence            100                       001122333444433333332   2 2344455555555555555555555555


Q ss_pred             CccccCCc----cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEec-C-CCHHHHHHHHHHHHHHHH
Q 015890          309 GAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG-G-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       309 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~-~~~~~~~~~~~~l~~~~~  382 (398)
                      +++++|..    +..+.+.++    +..++.+.| .++||.+..    ..++.||||++ . ++++|++++++.|+++++
T Consensus       329 ~~i~~p~~~~~r~~~vsf~~~----~~~~v~~~L-~~~gi~~~~----r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~  399 (404)
T d1qz9a_         329 LTLVTPREHAKRGSHVSFEHP----EGYAVIQAL-IDRGVIGDY----REPRIMRFGFTPLYTTFTEVWDAVQILGEILD  399 (404)
T ss_dssp             CEECSCSSGGGBCSEEEEECT----THHHHHHHH-HTTTEECEE----ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccceeeEEEEecC----CHHHHHHHH-HHCCCEEee----cCCCeEEEECCCCCCCHHHHHHHHHHHHHHHH
Confidence            56665432    234555555    367788776 589997632    23678999996 3 789999999999999887


Q ss_pred             H
Q 015890          383 E  383 (398)
Q Consensus       383 ~  383 (398)
                      +
T Consensus       400 ~  400 (404)
T d1qz9a_         400 R  400 (404)
T ss_dssp             H
T ss_pred             h
Confidence            5

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.89  E-value=2.5e-20  Score=168.31  Aligned_cols=289  Identities=21%  Similarity=0.237  Sum_probs=205.9

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEE
Q 015890           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTH  137 (398)
Q Consensus        62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~  137 (398)
                      +.|+..  ....++.+.+.+..+.+  .+..++++||.+|+..++.+++++||+|+++...|.+...    .+..+|+++
T Consensus        55 ~~Y~R~--~nPT~~~LE~~la~LEg--g~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~  130 (397)
T d1y4ia1          55 YIYTRL--GNPTTDALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINV  130 (397)
T ss_dssp             SCCCTT--SCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEE
T ss_pred             ceeeCC--CCHHHHHHHHHHHHHhC--CccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEe
Confidence            445433  23455666666665555  3557888999999999999999999999999999977543    456789999


Q ss_pred             EEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCcccc
Q 015890          138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCC  216 (398)
Q Consensus       138 ~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~  216 (398)
                      .++ +.      -|.+.+++.+++++  ++|++++|.||+..+.+   |++|+++|+++|+++++|.++ .++.-.+   
T Consensus       131 ~~v-d~------~d~~~~~~~i~~~T--klv~~Esp~NP~l~v~D---i~~i~~iA~~~gi~~vvDnT~atP~~~~P---  195 (397)
T d1y4ia1         131 RFV-DA------GKPEEIRAAMRPET--KVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQP---  195 (397)
T ss_dssp             EEE-CT------TSHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCCG---
T ss_pred             ecc-CC------CCHHHHHHhcCCCC--cEEEecCCcccceeecc---cHHHHHHhhcCCceEEecCcccCcccCcc---
Confidence            888 32      27899999998876  99999999999999999   999999999999999999988 3332211   


Q ss_pred             ccCCcEEEEcccccccCC-CcceeEEEEccCCcHHHHHHH--HHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHH
Q 015890          217 VEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV  293 (398)
Q Consensus       217 ~~~~~~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  293 (398)
                      ...+.++++.|++|.++- ...-.|.++++   ++.+.+.  ...+.....++++...+.+...|+.    +.-+.++..
T Consensus       196 l~~GaDivihS~TKyi~Ghsdvl~G~v~~~---~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T----L~lRm~~~~  268 (397)
T d1y4ia1         196 LQLGADIVVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT----LGIRMERHC  268 (397)
T ss_dssp             GGGTCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT----HHHHHHHHH
T ss_pred             hhcCCCEEEEehhhhcCCCcceeeeccCCC---HHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc----HHHHHHHHH
Confidence            223345899999999963 33446777777   5666543  3344445677888888888888876    677778889


Q ss_pred             HHHHHHHHHhccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC---
Q 015890          294 RNREIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---  353 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---  353 (398)
                      +++..+.+.|++++.+ +|..|.                .+..+.+.+..    ..+...+++++-.+.-. +..++   
T Consensus       269 ~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~----~~~~~~~f~~~L~l~~~-a~SlGg~e  343 (397)
T d1y4ia1         269 ENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG----GLEAGRRMINSVELCLL-AVSLGDTE  343 (397)
T ss_dssp             HHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETT----HHHHHHHHHHTCSSSEE-CSCCSCSS
T ss_pred             HHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecC----CHHHHHHHHHcCCccce-eeccCccc
Confidence            9999999999988764 233220                13334455542    34444556555444321 11111   


Q ss_pred             ------------------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 ------------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 ------------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                              .++.||+|++.   |+.+.+++.|.+++++.
T Consensus       344 SLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGl---Ed~~DLi~Dl~~AL~~a  395 (397)
T d1y4ia1         344 TLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL---EDPEDIINDLEHAIRKA  395 (397)
T ss_dssp             CEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHHH
T ss_pred             ceeeCccccccccCCHHHHHHcCCCcCEEEEEecc---CCHHHHHHHHHHHHHHh
Confidence                                    14689999997   67777888888888763

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=1.3e-20  Score=170.16  Aligned_cols=281  Identities=18%  Similarity=0.200  Sum_probs=201.3

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (398)
                      ..++.+.+.+..+.+  .+..+++++|.+|+..++.+++++||+|+++...|.+....+    +.+|+++.++ +.    
T Consensus        59 PT~~~LE~~la~LEg--~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~-d~----  131 (392)
T d1gc0a_          59 PTLNLLEARMASLEG--GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DM----  131 (392)
T ss_dssp             HHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CT----
T ss_pred             hHHHHHHHHHHHHhC--CcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccC-Cc----
Confidence            355555565555555  456788899999999999999999999999999998866544    5568888887 32    


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~  226 (398)
                        -|++.+++++++++  ++|++++|.||+..+.+   |++|+++|+++|+++++|.++ .++.-.+   ...+.++++.
T Consensus       132 --~d~~~~~~ai~~~t--~lv~~Esp~NP~l~v~D---i~~i~~ia~~~g~~~vvDnT~atP~~~~P---l~~GaDivih  201 (392)
T d1gc0a_         132 --ADLQALEAAMTPAT--RVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRP---LELGADLVVH  201 (392)
T ss_dssp             --TCHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCG---GGGTCSEEEE
T ss_pred             --cCHHHHHHhCCCCC--eEEEecccccceeeecc---hHHHHHHHHhcCCEEEEecCccCccccCh---HHhCCCEEEE
Confidence              27899999999876  99999999999999999   999999999999999999998 2321111   1223458899


Q ss_pred             ccccccCC-CcceeEEEEccCCcHHHHHHHH--HhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHh
Q 015890          227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL  303 (398)
Q Consensus       227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l  303 (398)
                      |.+|.++- ...-.|.++++   ++.+.+++  ..+......+++...+.+...++.    +.-+.++..++...+.+.|
T Consensus       202 S~TKyi~Ghsd~~~G~v~~~---~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T----L~lRm~~~~~nA~~lA~~L  274 (392)
T d1gc0a_         202 SATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVLAEFL  274 (392)
T ss_dssp             ETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH
T ss_pred             ecceeecCCcccccccccch---hHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc----HHHHHHHHHHHHHHHHHHH
Confidence            99999953 33556778887   66665443  344445777888888888888886    6778888889999999999


Q ss_pred             ccCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC-----------
Q 015890          304 SPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC-----------  352 (398)
Q Consensus       304 ~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~-----------  352 (398)
                      ++++.++ |..|.                ++-.+.+.+.    .+.+...++++.-.+.-   .-|...           
T Consensus       275 ~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~----~~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th  350 (392)
T d1gc0a_         275 ARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK----GGIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTH  350 (392)
T ss_dssp             HTCTTEEEEEEC----------------CCTTEEEEEET----THHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTT
T ss_pred             HhCCCccEEeeccccCCcccccccccccCCCcEEEEEEe----CCHHHHHHHHHhCCcceEeeccCCcChhhcCcccccc
Confidence            8877633 32221                1222334443    23444455555555432   111110           


Q ss_pred             -----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 015890          353 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       353 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~  383 (398)
                                 + .++.||+|++.   |+.+.+++.|.++++.
T Consensus       351 ~~~~~e~r~~~Gi~~~liRlSVGl---Ed~eDLi~Dl~~AL~a  390 (392)
T d1gc0a_         351 SSYTPEERAHYGISEGLVRLSVGL---EDIDDLLADVQQALKA  390 (392)
T ss_dssp             SSSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHcCCCcCeEEEEeee---CCHHHHHHHHHHHHHh
Confidence                       0 14689999997   6677777888888765

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.9e-20  Score=168.86  Aligned_cols=286  Identities=23%  Similarity=0.208  Sum_probs=205.4

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~  146 (398)
                      ....+.+.+.+..+.+  .+..++++||.+|+..++.+++++||.|++....|.+..    ..+...|.++.++ ..   
T Consensus        49 nPt~~~le~~la~LEg--g~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~-d~---  122 (384)
T d1cs1a_          49 NPTRDVVQRALAELEG--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-DQ---  122 (384)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-CT---
T ss_pred             CHHHHHHHHHHHHHhC--CCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccc-cC---
Confidence            3455555565555555  456888999999999999999999999999999997754    3445567777776 22   


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                         .|.+.+++.+++++  ++|++++|.||+..+.+   |++|+++|+++|+++|||.++ .++.-.   +...+.++++
T Consensus       123 ---~d~~~~~~~~~~~t--~~v~~EspsNP~l~v~D---i~~i~~ia~~~g~~~vVDNT~atP~~~~---Pl~~GaDiVv  191 (384)
T d1cs1a_         123 ---GDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN---PLALGADLVL  191 (384)
T ss_dssp             ---TCHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC---GGGGTCSEEE
T ss_pred             ---CCHHHHHhhccccc--cEEEEeccccccceecc---HHHHhhhhhhcCcEEEEeccccCccccc---ccccCCCEEE
Confidence               27889999999887  99999999999999999   999999999999999999988 333221   1223455899


Q ss_pred             cccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890          226 FSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       226 ~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      .|.+|.++- ...-.|.++.++  +.+.+.+.........+.++...+.+...|+.    +.-+.++..+++..+.+.|+
T Consensus       192 hS~TKyi~Ghsdv~~G~vv~~~--~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T----L~lRm~~~~~nA~~lA~~L~  265 (384)
T d1cs1a_         192 HSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIVKYLQ  265 (384)
T ss_dssp             EETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHT
T ss_pred             EccccccccCCCcccccccCCc--hhhhhhhhhhhhhhhhccccccHHHHhhccch----hHHHHHHHHHHHHHHHHhcc
Confidence            999999963 334567777765  66777776666656777888888888888876    67778888999999999999


Q ss_pred             cCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEEe---cCCCC------------
Q 015890          305 PLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC------------  352 (398)
Q Consensus       305 ~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~---~g~~~------------  352 (398)
                      .++.+ +|..|.                ++..+.+.+..    +.+.+.+++++-.+...   -|...            
T Consensus       266 ~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~----~~~~a~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~  341 (384)
T d1cs1a_         266 TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG----DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHA  341 (384)
T ss_dssp             TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS----CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTT
T ss_pred             cCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc----hHHHHHHHHHhCCcceeccccCCccceeccccccccc
Confidence            88763 222221                13344455542    23444445544444321   11110            


Q ss_pred             ----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          353 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       353 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                                + .++.||+|++-   |+.+.+++.|.+++++..+
T Consensus       342 ~~~~e~r~~~Gi~~~lvRlSvGl---Ed~eDLi~Dl~~AL~aa~~  383 (384)
T d1cs1a_         342 GMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK  383 (384)
T ss_dssp             TSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHTC
T ss_pred             cCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHHHhcC
Confidence                      0 13679999997   7778888999999988654

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.89  E-value=6e-21  Score=175.52  Aligned_cols=308  Identities=15%  Similarity=0.109  Sum_probs=211.7

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY  123 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~  123 (398)
                      +++-++++.+.+..+.   |...+...++++.++++++      .+.++++++||+|+.+++.++ +++||+|+++..+|
T Consensus        11 ~~~~~~~~~~~~~~~~---~~~G~~v~~~E~~la~~~g------~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~   81 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTW   81 (376)
T ss_dssp             CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred             CHHHHHHHHHHHhcCC---CcCCHHHHHHHHHHHHHHC------cCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecccc
Confidence            4666778888776542   3334556788888888873      357888999999999999999 79999999999999


Q ss_pred             cChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      ......+...|.+++.+ +++.+.+.+|++.|++++++++  ++|++++   ..|...+   +++|.++|+++|+++|+|
T Consensus        82 ~~~~~ai~~~g~~pv~~-d~~~~~~~~d~~~l~~~i~~~t--kaIi~~h---~~G~~~~---~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          82 VSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQT--KAIIPVH---YAGAPAD---LDAIYALGERYGIPVIED  152 (376)
T ss_dssp             HHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEECCBC---GGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred             cccccchhccccceeee-cccccccCCCHHHHHHhcCCCC--eEEEEeC---CCCCccc---hhHHHHHHHhcCceEEec
Confidence            99999999999999999 8888888899999999999876  8888764   5788888   899999999999999999


Q ss_pred             ece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-------------------
Q 015890          204 NTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-------------------  261 (398)
Q Consensus       204 e~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~-------------------  261 (398)
                      +++ ++  +.+.....  .+..++.++.+|.++.  ...|.+++++  +++.+.+..+...                   
T Consensus       153 ~a~a~g~~~~~~~~g~--~g~~~~Sf~~~K~l~~--g~GG~i~t~~--~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  226 (376)
T d1mdoa_         153 AAHATGTSYKGRHIGA--RGTAIFSFHAIKNITC--AEGGIVVTDN--PQFADKLRSLKFHGLGVDAWDRQSGGRAPQAE  226 (376)
T ss_dssp             CTTCTTCEETTEETTS--SSEEEEECCTTSSSCS--SSCEEEEESC--HHHHHHHHHHTBTTEECC-----------CCE
T ss_pred             cchhccCeeCCeeccc--ccCccccCCCcCCCCC--CCCCEEEEec--hhHHHHHHhhcccCCccccccccccccccccc
Confidence            999 43  33322222  2334444555798863  2358888886  7777777654321                   


Q ss_pred             -----CCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc----cE-EEEeeCCC--CCC
Q 015890          262 -----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AI-YLWARLPE--KHL  329 (398)
Q Consensus       262 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----~~-~~~~~~~~--~~~  329 (398)
                           ..+.++....+.+...|..    +++..++.+++++.+.+.|++.+...+.....    .. .+.+.+..  ...
T Consensus       227 ~~~~g~n~~~~~~~Aai~~~qL~~----~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (376)
T d1mdoa_         227 VLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGI  302 (376)
T ss_dssp             ESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSS
T ss_pred             chhcccccccchhhhhhhhhhhhh----hhHHHHHHhhhhhhhhhhcccccccccccccccccccccccccccccccchh
Confidence                 1222333444444444443    45555666677777888887766533322211    11 11222221  112


Q ss_pred             ChHHHHHHHHHhcCeEEecCCCC-----------CC----------CCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 015890          330 DDFEVVRWLAHRHGVVVIPGGAC-----------GC----------RGHLRISFGG-LVEDDCKAAADRLRRGL  381 (398)
Q Consensus       330 ~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~  381 (398)
                      +..++++.| +++||.++.....           ..          ...|.+-+.. .+.+|+++.++.|++++
T Consensus       303 ~Rd~l~~~L-~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~  375 (376)
T d1mdoa_         303 TRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIA  375 (376)
T ss_dssp             CHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHH-HHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            345677776 5899988654221           00          2357765555 78999999999998864

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=3.8e-20  Score=168.16  Aligned_cols=363  Identities=17%  Similarity=0.136  Sum_probs=256.1

Q ss_pred             HhHHhhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHH
Q 015890            7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKK   80 (398)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~~~~~l~~~   80 (398)
                      +++-++..+.+.+.-+.+.....++.++|-...|.  .++.+++++..-+.+.-.-+      |+-.....+++....+.
T Consensus         8 ~~~~l~~~D~ei~~~i~~e~~rq~~~l~LIaSEN~--~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r   85 (470)
T d1rv3a_           8 LAQPLKDSDAEVYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKR   85 (470)
T ss_dssp             TTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred             HhhhHhhhCHHHHHHHHHHHHHHHcCceEecCCCc--CCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHH
Confidence            34455567777777777777767889999987766  47999999888776532222      32234456666666677


Q ss_pred             HhhhcCCCCC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----------HhcCcEEEEeccCCCC
Q 015890           81 LNQENKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----------QMTGVTHILVGPCSSK  146 (398)
Q Consensus        81 l~~~~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~  146 (398)
                      .++.++.+++    +|- ..|++.|+.+++.++++|||+|+..+....++...-          .....+.+.+ +++.+
T Consensus        86 a~~lF~~~~~~~~anVq-p~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~v~~~  163 (470)
T d1rv3a_          86 ALQAYGLDPQCWGVNVQ-PYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPD  163 (470)
T ss_dssp             HHHHTTCCTTTEEEECC-CSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTT
T ss_pred             HHHHhCCChhhcccccc-ccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEE-EEecc
Confidence            7888888643    233 256779999999999999999999887776654321          1222577788 88888


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i  223 (398)
                      ...+|.|++++..+... |++|++....+|  ..++   .+++.++|++.|.++++|.+|   +...+.-..+..+. ++
T Consensus       164 ~~~IDyd~l~~~a~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~a-Dv  236 (470)
T d1rv3a_         164 TGYIDYDRLEENARLFH-PKLIIAGTSCYS--RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHC-HV  236 (470)
T ss_dssp             TCSBCHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTC-SE
T ss_pred             cCcccHHHHHHHHHhhC-cceEeechhhcc--ccCC---HHHHHHHHhccCCeEEecchhhhhhccccccCChhhee-ee
Confidence            77899999999988554 699998754444  4567   889999999999999999999   44455444445443 58


Q ss_pred             EEcccccccCCCcceeEEEEccCCc------------HHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHH
Q 015890          224 NLFSFSKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERV  289 (398)
Q Consensus       224 ~~~s~sK~~~~~G~r~G~i~~~~~~------------~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~  289 (398)
                      +++|.+|+|  +|.|.|.|..++..            .++.+++.... .....++....+++.+-++.. ..+.+.++.
T Consensus       237 vt~tTHKtl--rGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya  314 (470)
T d1rv3a_         237 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ  314 (470)
T ss_dssp             EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             eeeehhhhc--cCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHH
Confidence            899999998  58888999887421            13666665543 333344445555555555554 345678999


Q ss_pred             HHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCC-----CCCCeEEEEecC
Q 015890          290 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-----GCRGHLRISFGG  364 (398)
Q Consensus       290 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----~~~~~iRi~~~~  364 (398)
                      +++.++++.|.+.|.+.|...+.+......+++++.....+..+ ++++|++.||.+.--..+     ..+..|||+...
T Consensus       315 ~qvv~NAk~La~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~-ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a  393 (470)
T d1rv3a_         315 RQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGR-AEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPA  393 (470)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHH-HHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHH
T ss_pred             HHHHHHHHHHHHHHHhCCceeccCCCCCceEEEeecccCCcHHH-HHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHH
Confidence            99999999999999998884455555577788888654445555 445667999988532211     135689999432


Q ss_pred             -----CCHHHHHHHHHHHHHHHHH
Q 015890          365 -----LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       365 -----~~~~~~~~~~~~l~~~~~~  383 (398)
                           ..++|+.++.+.|.++++.
T Consensus       394 lTtrG~~e~dm~~iA~~I~~~l~~  417 (470)
T d1rv3a_         394 LTSRGLLEKDFQKVAHFIHRGIEL  417 (470)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCHHHHHHHHHHHHHHHHH
Confidence                 5789999999999988853

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.88  E-value=8.2e-21  Score=172.00  Aligned_cols=358  Identities=16%  Similarity=0.139  Sum_probs=238.4

Q ss_pred             hhccCchHHHHHHHHHHcCCCeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHhhh
Q 015890           11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQE   84 (398)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~g~~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~~~~~l~~~l~~~   84 (398)
                      ++..|.+...-+.+.....++.++|-...|.  .+|.+++++...+.+.-.-+      |+-.....+++....+..+++
T Consensus         8 L~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~--~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~l   85 (463)
T d2a7va1           8 LSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA   85 (463)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHhcCeeEeccCCc--CCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            3455666666666666666778999887766  47999999888775422222      223455677777777888888


Q ss_pred             cCCCCC----cEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH--------HhcC--cEEEEeccCCCCCCCC
Q 015890           85 NKLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHP  150 (398)
Q Consensus        85 ~~~~~~----~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~  150 (398)
                      ++++..    +|-.- |++.|+.+++.+|++|||+|+..++.+.++...-        ...|  .+...+ .+++++..+
T Consensus        86 F~~~~a~w~vNVqp~-SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y-~~d~~~~~I  163 (463)
T d2a7va1          86 FDLDPAQWGVNVQPY-SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI  163 (463)
T ss_dssp             TTCCTTTEEEECCCS-SHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred             hCCCchhccCCcccc-ccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeee-eccCCCCcC
Confidence            898765    56644 4569999999999999999998877775554221        1122  245556 666666789


Q ss_pred             ChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCCccccccCCcEEEEcc
Q 015890          151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGRKHCCVEGDHVVNLFS  227 (398)
Q Consensus       151 d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~~~~~~~~~~~i~~~s  227 (398)
                      |.|++++..+... |++|++....+|  ..++   .+++.++|++.|.++++|.+|   +...+.-..+..+. +++++|
T Consensus       164 Dyd~~~~~a~~~k-PklIi~G~S~y~--r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~a-Dvvt~t  236 (463)
T d2a7va1         164 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA-DIVTTT  236 (463)
T ss_dssp             CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTC-SEEEEE
T ss_pred             cHHHHHHHHhhcC-CceEEecccccc--cccC---HHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhh-hhhhch
Confidence            9999999998654 799998754444  4567   889999999999999999999   44455544555443 578889


Q ss_pred             cccccCCCcceeEEEEccCCc------------HHHHHHHHHhh-ccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHH
Q 015890          228 FSKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLV  293 (398)
Q Consensus       228 ~sK~~~~~G~r~G~i~~~~~~------------~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~  293 (398)
                      .+|+|  +|.|.|.|..+++.            .++.+++.... .....++....+++.+-++.. ....++++.+++.
T Consensus       237 THKTl--rGPrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv  314 (463)
T d2a7va1         237 THKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL  314 (463)
T ss_dssp             SSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             hhhhh--cCCCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHH
Confidence            99998  68899999887521            04556665443 333334444444444445443 2355789999999


Q ss_pred             HHHHHHHHHhccCCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----CCCeEEEEecC----
Q 015890          294 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG----  364 (398)
Q Consensus       294 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~~----  364 (398)
                      ++++.|.+.|.+.|...+.+......+++++.....+...... .|++.||.+.--..+.     .++.|||+...    
T Consensus       315 ~NAk~La~~L~~~G~~vv~ggTdnHlvlvdl~~~~~~G~~ae~-~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~Ttr  393 (463)
T d2a7va1         315 KNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAER-VLELVSITANKNTCPGDRSAITPGGLRLGAPALTSR  393 (463)
T ss_dssp             HHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHH-HHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHT
T ss_pred             HHHHHHHHHHHhCCCeeecCCCCCceeeeeccccCCCHHHHHH-HHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhC
Confidence            9999999999998884455556577788898654445555555 5579999995333221     35689999433    


Q ss_pred             -CCHHHHHHHHHHHHHHHH
Q 015890          365 -LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       365 -~~~~~~~~~~~~l~~~~~  382 (398)
                       ..++|+.++.+.|.+++.
T Consensus       394 G~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         394 QFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             TCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH
Confidence             477899999999988875

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=4.3e-20  Score=166.40  Aligned_cols=281  Identities=20%  Similarity=0.175  Sum_probs=198.5

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~  147 (398)
                      ...+.+.+.+..+.+  .+..+++++|.+|+. ++.+++++||+|++..+.|.+....+    ...|+++.++ +.    
T Consensus        49 Pt~~~le~~la~LE~--~~~a~~fsSGMaAis-all~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~-d~----  120 (380)
T d1ibja_          49 PTRDALESLLAKLDK--ADRAFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NT----  120 (380)
T ss_dssp             HHHHHHHHHHHHHHT--CSEEEEESSHHHHHH-HHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CT----
T ss_pred             hHHHHHHHHHHHHcC--CceEEehhhHHHHHH-HHHHhhCCCCEEEEEecccccccchhhhhhcccccccccc-Cc----
Confidence            345555555555555  356788888899997 55678899999999999998766554    4467888777 22    


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEc
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLF  226 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~  226 (398)
                        .+.+.+++++++++  ++|+++.|.||+..+.+   |++|+++|+++|+++|+|.++ -++.-   .+...+.++++.
T Consensus       121 --~~~~~~~~ai~~~t--~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vVDnT~atP~~~---~Pl~~GaDiVvh  190 (380)
T d1ibja_         121 --TKLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVLS---RPLELGADIVMH  190 (380)
T ss_dssp             --TSHHHHHHHCCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTC---CGGGTTCSEEEE
T ss_pred             --chHHHHHHHhccCc--cEEEecccccccccccc---HHHHHHHHHHcCCeEEeeccccccccc---cccccCCCEEEe
Confidence              27889999998876  99999999999999999   999999999999999999988 33211   122234568999


Q ss_pred             ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890          227 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       227 s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                      |++|.++- ...-.|.++.++  +.+.+.+...........++...+.+...++.    +..+.+++.+++..+.+.|++
T Consensus       191 S~TKyi~GhsDv~~G~v~~~~--~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----l~lRm~~~~~nA~~lA~~L~~  264 (380)
T d1ibja_         191 SATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQENARKIAMYLSS  264 (380)
T ss_dssp             ETTTTTTCSSCCCCEEEEECS--HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeccccCccccccccch--hhHHHHHHhhccccCCcCCHHHHHHHHhcchh----hhhhHHHHHHHHHHHHHHHHh
Confidence            99999963 234567777664  66777777777767778888988888888886    677888889999999999998


Q ss_pred             CCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE-------------ecCCC--C-
Q 015890          306 LGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV-------------IPGGA--C-  352 (398)
Q Consensus       306 ~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v-------------~~g~~--~-  352 (398)
                      ++.++ |..|.                ++..+.+.+.     ..+...+++++-.+.-             .|.+.  . 
T Consensus       265 hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~-----~~~~a~~f~d~l~l~~~a~SlG~~~SLi~~p~~~th~~  339 (380)
T d1ibja_         265 HPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-----SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHAS  339 (380)
T ss_dssp             CTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-----CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCS
T ss_pred             CCCeeEEeccccccCcccccccccccccccccccccc-----HHHHHHHHHHhCCcCeEeeccCCccccccCchhhhhhc
Confidence            77643 22211                1222233333     2233444444444322             11110  0 


Q ss_pred             ---------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 ---------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 ---------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                               + .++.||||++-   |+.+.+++.|.++++.+
T Consensus       340 ~~~e~r~~~Gi~~~lvRlSvGl---E~~eDLi~Dl~qAl~~l  378 (380)
T d1ibja_         340 IPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKTF  378 (380)
T ss_dssp             CCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHSC
T ss_pred             CCHHHHHHcCCCcCeEEEEecc---CCHHHHHHHHHHHHHhc
Confidence                     0 13679999997   67777888888888753

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.87  E-value=1.8e-20  Score=175.51  Aligned_cols=294  Identities=12%  Similarity=0.084  Sum_probs=197.6

Q ss_pred             HHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc--cCCCEEEEeCCCCcChhhHHHhcCcEEEEeccC--CCCCC
Q 015890           73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSKTL  148 (398)
Q Consensus        73 ~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~  148 (398)
                      +...+..++.+..+.+.....+..|+++++.+++.+..  .+++.|+++...|+++...+...|+.++.+ +.  +.+.+
T Consensus       114 ~~~~~~~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v-~~~~~~~~~  192 (434)
T d2z67a1         114 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLDGDRV  192 (434)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEETTEE
T ss_pred             HHHHHHHHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEE-EeecCCCcc
Confidence            44445555666677766666667777777777777764  367899999999999999999999998887 42  23446


Q ss_pred             CCChHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCC-CccccccCCc
Q 015890          149 HPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDG-RKHCCVEGDH  221 (398)
Q Consensus       149 ~~d~e~l~~~l~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~-~~~~~~~~~~  221 (398)
                      .+|+++|++++++   ...+.+|+++.|++++|.+.+   +++|+++|+++|+++++|++|   +.+.+ ........+.
T Consensus       193 ~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~---l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~~  269 (434)
T d2z67a1         193 YVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV  269 (434)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred             CCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC---HHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCCc
Confidence            7899999999973   122467888899999999999   999999999999999999999   22211 1111222334


Q ss_pred             EEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       222 ~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  301 (398)
                      ++++.|.+|.++. +...|++..++  +.+++++.........+.+....++....+.  ...+.+..++..++++++.+
T Consensus       270 D~~~~s~hK~l~~-~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~g~~~~~~~~~~~a~~l~~  344 (434)
T d2z67a1         270 DAVVSSSDKNLLT-PIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKKLLDE  344 (434)
T ss_dssp             SEEEEEHHHHHCC-CSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEcCcccccc-CCCccccccCc--HHHHHHHHhhcccccccchHHHHHHHHHHHH--HhcchhHHHHHHHHHHHHHH
Confidence            5788899998863 33456676665  6777777665543334444444444433333  34455556666666666666


Q ss_pred             HhccC---CCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC----C-------CCCCCCeEEEEecC-CC
Q 015890          302 ALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG----G-------ACGCRGHLRISFGG-LV  366 (398)
Q Consensus       302 ~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g----~-------~~~~~~~iRi~~~~-~~  366 (398)
                      .|+++   .+..+...+....+.+.+..   +..++...|. +.||....+    .       .+...+++|++++. .+
T Consensus       345 ~L~~l~~~~g~~ll~~~~~~~~~~~~~~---~~~~l~~~L~-~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T  420 (434)
T d2z67a1         345 LLNDLSKKTGGKFLDVESPIASCISVNS---DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVR  420 (434)
T ss_dssp             HHHHHHHHSSCCBCCCCCSSEEEEECSS---CHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCC
T ss_pred             HHHHhhhhcCceecCCCCCceeeeecCC---CHHHHHHHHH-HcCCeeeehhhhccccCeeeecccCCCeEEEecCCCCC
Confidence            55542   22355444434444445442   5667777664 889854211    1       12345789999887 79


Q ss_pred             HHHHHHHHHHHHH
Q 015890          367 EDDCKAAADRLRR  379 (398)
Q Consensus       367 ~~~~~~~~~~l~~  379 (398)
                      .+|+++++++|++
T Consensus       421 ~edID~~i~~L~k  433 (434)
T d2z67a1         421 TEDIVNSVSKLEK  433 (434)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999875

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.86  E-value=3.5e-19  Score=161.05  Aligned_cols=282  Identities=18%  Similarity=0.197  Sum_probs=197.1

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhH----HHhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~  147 (398)
                      ...+.+.+.+..+.+  .+..+++++|.+|+..++.+++++||.|++....|.+....    ++.+|.++..+ +.    
T Consensus        67 Pt~~~LE~~la~LEg--g~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~-~~----  139 (398)
T d1qgna_          67 PTTVVLEEKISALEG--AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DP----  139 (398)
T ss_dssp             HHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CS----
T ss_pred             hHHHHHHHHHHHHhC--CceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccc-cc----
Confidence            345555555555445  45688999999999999999999999999999999776544    45668888877 32    


Q ss_pred             CCCChHHHH-HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          148 LHPDADWLE-KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       148 ~~~d~e~l~-~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                        .+.+..+ +.+++++  ++|++++|.||+..+.+   |++|+++|+++|+++|||.++ .++.-   .+...+.++++
T Consensus       140 --~~~~~~~~~~~~~~t--~~v~~EspsNP~l~v~D---i~~ia~ia~~~g~~~vVDnT~atP~~~---~Pl~~GaDiVi  209 (398)
T d1qgna_         140 --ADVGALELALNQKKV--NLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ---KALALGADLVL  209 (398)
T ss_dssp             --SCHHHHHHHHHHSCE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---CTTTTTCSEEE
T ss_pred             --cchhhhhhhhccccc--eEEEccCccccccccch---HHHHHHHHhhcCCEEEecceeeccccC---CchhhCCCEEE
Confidence              1344444 4445554  99999999999999999   999999999999999999988 33311   12223455899


Q ss_pred             cccccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhc
Q 015890          226 FSFSKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS  304 (398)
Q Consensus       226 ~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~  304 (398)
                      .|++|.++-. ..-.|.++.+   ++++..+.........+.++...+.+...++.    +.-+.+++.+++..+.+.|+
T Consensus       210 hS~TKy~~Ghsdv~~G~v~~~---~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----L~lRm~~~~~nA~~lA~~L~  282 (398)
T d1qgna_         210 HSATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILE  282 (398)
T ss_dssp             ECTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHH
T ss_pred             EechhhcCcccceeehhhcch---hhhhhhhhhhcccCCCcCCHHHHHHHHhcchH----HHHHHHHHHHHHHHHHHHHH
Confidence            9999999632 2445677766   78888887777766778888888888888876    67788888999999999999


Q ss_pred             cCCCCc-cccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE-ec--CCCC------------
Q 015890          305 PLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV-IP--GGAC------------  352 (398)
Q Consensus       305 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v-~~--g~~~------------  352 (398)
                      +++.++ |..|.                .+..+.+.+..    +.+...+++++-.+.- .+  |...            
T Consensus       283 ~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g----~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~  358 (398)
T d1qgna_         283 AHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG----DLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYW  358 (398)
T ss_dssp             TCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS----CHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHST
T ss_pred             hCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecC----CHHHHHHHHHcCCcceeeeCCCCCcceeeCcchhccc
Confidence            877643 32221                12233444432    2333334444444322 11  1110            


Q ss_pred             ----------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                + .++.||+|++-   |+.+.+++.|+++++++
T Consensus       359 ~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~AL~~i  398 (398)
T d1qgna_         359 DLSQSDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDSI  398 (398)
T ss_dssp             TSCHHHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHhcC
Confidence                      0 13679999997   66777888888888753

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.4e-19  Score=162.29  Aligned_cols=283  Identities=16%  Similarity=0.104  Sum_probs=198.1

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~  146 (398)
                      ....+.+.+.+..+.|  .+..+++++|.+|+..++.+++++||+|++....|.+....+    ...|+++..+ +.   
T Consensus        57 nPt~~~le~~la~LEg--~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~-d~---  130 (391)
T d1cl1a_          57 TLTHFSLQQAMCELEG--GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DP---  130 (391)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CT---
T ss_pred             ChhHHHHHHHHHHHhC--CccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccc-cC---
Confidence            4455666666666555  457888999999999999999999999999999998755444    5568888877 32   


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEeece-eccCCCccccccCCcEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTY-FMYDGRKHCCVEGDHVV  223 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~--~~~~livDe~~-~~~~~~~~~~~~~~~~i  223 (398)
                         .|.+.+++.+++++  ++|++++|.||+..+.+   +++++++|++  +|+++++|.++ .++.-.   +...+.++
T Consensus       131 ---~d~~~~~~~i~~~t--~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~~~---Pl~~GaDi  199 (391)
T d1cl1a_         131 ---LIGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLFK---ALDFGIDV  199 (391)
T ss_dssp             ---TCGGGGGGTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSSC---GGGGTCSE
T ss_pred             ---cccccccccccccc--ceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhhhc---ccccccce
Confidence               26788899998876  99999999999999999   8888988876  49999999988 332111   12234458


Q ss_pred             EEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          224 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       224 ~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      ++.|++|.++- ...-.|.++.+   ++..+.+.........+.++...+.+...++.    +.-+.+++.+++..+.+.
T Consensus       200 vvhS~TKy~~GhsdvlgG~vv~~---~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T----L~lR~~~~~~nA~~vA~~  272 (391)
T d1cl1a_         200 SIQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLRT----LGVRLRQHHESSLKVAEW  272 (391)
T ss_dssp             EEEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred             EEeecchhccccccccccceecc---ccccccchhhhhcccccCCchhhhhhhccchh----HHHHHHHHHHHHHHHHHH
Confidence            89999999963 22446777776   45666666555555677788888777777776    677778888999999999


Q ss_pred             hccCCCCc-cccC-----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC-----------
Q 015890          303 LSPLGEGA-VKGG-----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------  353 (398)
Q Consensus       303 l~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------  353 (398)
                      |++++.+. |..|                 .++. +.+.+.... +.++.. +++++-.+.. .+..++           
T Consensus       273 L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~-~sf~l~~~~-~~e~~~-~f~d~L~l~~-~a~SlG~~~SLi~~~~~  348 (391)
T d1cl1a_         273 LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGL-FSFVLKKKL-NNEELA-NYLDNFSLFS-MAYSWGGYESLILANQP  348 (391)
T ss_dssp             HHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSE-EEEEESSCC-CHHHHH-HHHTTCSSCB-CCSCCCSSSCEEEEECH
T ss_pred             HHhcccccccccccccchhhHHHHhhccCCCCcc-eeeeecCCC-CHHHHH-HHHHcCCcce-EeeCCCCCccceeCCcc
Confidence            98877633 2221                 1232 233443221 233333 3444444322 111111           


Q ss_pred             --------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          354 --------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       354 --------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                    .++.||+|++-   |+.+.+++.|.+++.++
T Consensus       349 ~~~~~~~~~~~~gi~~~liRlSVGl---Ed~eDLi~Dl~~AL~~i  390 (391)
T d1cl1a_         349 EHIAAIRPQGEIDFSGTLIRLHIGL---EDVDDLIADLDAGFARI  390 (391)
T ss_dssp             HHHHHTSTTCCCCCCSCEEEEECCS---SCHHHHHHHHHHHHHHT
T ss_pred             cccccCCchHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHhh
Confidence                          13579999997   77778888888888765

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.86  E-value=2.6e-19  Score=164.38  Aligned_cols=314  Identities=11%  Similarity=0.119  Sum_probs=215.2

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCC
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY  122 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~  122 (398)
                      ...+-++++.+.+..+. ..+...+-..++++.+++++    |  .+.++.+++||.|+.+++.++ +++||+|++|..+
T Consensus        11 ~~~~~~~~~~~~l~~g~-~~~~~g~~v~~fE~~~a~~~----g--~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t   83 (384)
T d1b9ha_          11 YDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHH----G--AAHALAVTNGTHALELALQVMGVGPGTEVIVPAFT   83 (384)
T ss_dssp             CCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHT----T--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             CCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHH----C--cCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEeccc
Confidence            34666788888887642 22334555677888888887    3  456899999999999999998 6899999999999


Q ss_pred             CcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      |......+...|.+++.+ +.+++.+.+|++.+++.+.+++  ++|++.   +..|...+   +.++.++|+++|+++|.
T Consensus        84 ~~a~~~ai~~~g~~p~~~-d~~~~~~~~d~~~~~~~i~~~t--k~i~~~---~~~g~~~d---~~~i~~~~~~~~i~lie  154 (384)
T d1b9ha_          84 FISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIMPV---HMAGLMAD---MDALAKISADTGVPLLQ  154 (384)
T ss_dssp             CTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCE
T ss_pred             cccccccccccccccccc-cccccccccchhhhcccccccc--cccccc---cccccccc---cccchhhhhhhhhhhhh
Confidence            999999999999999999 8888888899999999998776  887654   56777778   88999999999999999


Q ss_pred             eece-e--ccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-----------------cC
Q 015890          203 DNTY-F--MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-----------------NI  262 (398)
Q Consensus       203 De~~-~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~-----------------~~  262 (398)
                      |.++ +  .+.+..... .++..++.++.+|.++.  ...|.+++++  +++.+.++.+..                 +.
T Consensus       155 D~a~a~ga~~~g~~~g~-~g~~~~~Sf~~~K~i~~--g~GG~i~t~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~  229 (384)
T d1b9ha_         155 DAAHAHGARWQGKRVGE-LDSIATFSFQNGKLMTA--GEGGAVVFPD--GETEKYETAFLRHSCGRPRDDRRYFHKIAGS  229 (384)
T ss_dssp             ECTTCTTCEETTEEGGG-SSSCEEEECCTTSSSCS--SSCEEEEECT--TCHHHHHHHHHHTBTTCCTTCSSCCCCSCCC
T ss_pred             hhceecccccCCEecCc-ccccceecccccccccc--cccchhhhhh--HHHHHHHHHHHhcCCCCcccccccccccccc
Confidence            9999 3  334433322 23445565666898863  2368888776  566666554432                 12


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-----CCc-cEEEEeeCCCCCCC-hHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-----GEG-AIYLWARLPEKHLD-DFEVV  335 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~-~~~~~  335 (398)
                      .+.++....+.+...|+.    +++..+.-+++.+.+.+.|++++.+....     ... .++..+.++....+ ..+++
T Consensus       230 n~rms~l~Aaig~~qL~~----ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~  305 (384)
T d1b9ha_         230 NMRLNEFSASVLRAQLAR----LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALV  305 (384)
T ss_dssp             BCBCBHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhh----cccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecccccccHHHHH
Confidence            233455555555555654    44555555667777778887765533221     111 12334444432211 23577


Q ss_pred             HHHHHhcCeEEecCCCC----------CC-------------------CCeEEEEecC-CC-HHHHHHHHHHHHHHHHH
Q 015890          336 RWLAHRHGVVVIPGGAC----------GC-------------------RGHLRISFGG-LV-EDDCKAAADRLRRGLEE  383 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~----------~~-------------------~~~iRi~~~~-~~-~~~~~~~~~~l~~~~~~  383 (398)
                      +.| +++||.++.....          +.                   ...|.+-+.. .+ ++|++..++.|++++.+
T Consensus       306 ~~L-~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~  383 (384)
T d1b9ha_         306 DRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  383 (384)
T ss_dssp             HHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence            766 5899988764321          00                   1246666555 55 57999999999998864

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.85  E-value=5.4e-20  Score=171.99  Aligned_cols=308  Identities=11%  Similarity=0.067  Sum_probs=200.7

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhcCcEEEEec
Q 015890           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG  141 (398)
Q Consensus        62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~  141 (398)
                      -.|+.++...+|++.+++++    |  .+.++++++|+.|+.+++++++++||.|+.... +..........|..++.+ 
T Consensus        69 d~Y~~dpt~~~lE~~~a~l~----G--~e~al~~~SGt~An~~a~~~l~~~Gd~Vi~~~~-f~~~~~~i~~~g~~~~~~-  140 (456)
T d1c7ga_          69 EAYAGSENFYHLEKTVKELF----G--FKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMY-FTTTRFHQEKNGATFVDI-  140 (456)
T ss_dssp             CCSSSCHHHHHHHHHHHHHH----C--CSEEEEESSHHHHHHHHHHHHCCTTEEEEESSC-CHHHHHHHHHTTEEEEEC-
T ss_pred             hhccCCchHHHHHHHHHHHh----C--CCeEEECCCHHHHHHHHHHHhcCCCCeEecCcc-hHHHHHHHHHcCceeeec-
Confidence            35877888888999999988    4  467899999999999999999999999887654 334444456678877655 


Q ss_pred             cCC---------CCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEeece-ec
Q 015890          142 PCS---------SKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTY-FM  208 (398)
Q Consensus       142 ~~~---------~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~livDe~~-~~  208 (398)
                      ..+         ...+.+|++.|++.+++.+  .+.++++.+++|+. |..++.+++++|.++|++||+++++|+++ +.
T Consensus       141 ~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~  220 (456)
T d1c7ga_         141 VRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVE  220 (456)
T ss_dssp             BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred             cccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhc
Confidence            321         2335689999999998432  24578888998885 56889999999999999999999999998 21


Q ss_pred             ---c--------CCCccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhh---cc--CCCCcch
Q 015890          209 ---Y--------DGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---DN--IPICASI  268 (398)
Q Consensus       209 ---~--------~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~---~~--~~~~~~~  268 (398)
                         +        .+......    ....++++.|++|.++.++  .|++++++  +++.++++...   ..  .....+.
T Consensus       221 ~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~--GG~i~~~~--~~l~~~~r~~~~~~~g~~~~g~~~~  296 (456)
T d1c7ga_         221 NAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNI--GGFLCMND--EEMFSAAKELVVVYEGMPSYGGLAG  296 (456)
T ss_dssp             HHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSS--CEEEEESC--HHHHHHHHHHHHHHTCCTTTTTCCH
T ss_pred             chhhhcccccccCCCChhhhccccccccccEEEeccccccccc--eeEEEcCC--HHHHHHHHHhccccCCCcccchhhH
Confidence               1        11110000    0112366779999997543  37888776  67777665432   11  1122333


Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeC----CC---CCCChHHHHHHHHHh
Q 015890          269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL----PE---KHLDDFEVVRWLAHR  341 (398)
Q Consensus       269 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~ll~~  341 (398)
                      ....++...+.....  .+..+...++.++|.+.|.+.+. .+..+.+++.+.++.    +.   ..-....+..++..+
T Consensus       297 ~~~~a~a~~l~e~~~--~~~l~~r~~~~~~L~e~L~~~g~-~vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~  373 (456)
T d1c7ga_         297 RDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLREAGV-PIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYME  373 (456)
T ss_dssp             HHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHTTC-CBCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhccC-CcccCCCCcceeEechhhccCCCcccccHHHHHHHHHHH
Confidence            334443333332111  12233334555677788877766 444455566665542    11   111245566667778


Q ss_pred             cCeEEecCCCC-------------CCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHH
Q 015890          342 HGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       342 ~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .||...+...+             .....+|+++..  .|+++++..++.|+++.++.
T Consensus       374 ~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~~~  431 (456)
T d1c7ga_         374 TGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK  431 (456)
T ss_dssp             HSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHTTG
T ss_pred             hCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHhhh
Confidence            89976543221             112469999875  48899999999998887653

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.85  E-value=1.2e-20  Score=176.94  Aligned_cols=340  Identities=11%  Similarity=0.020  Sum_probs=211.8

Q ss_pred             HcCCCeEEcCCcc--CCCC-CcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHH
Q 015890           27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ  100 (398)
Q Consensus        27 ~~g~~~~~l~~g~--~~~~-~~~~v~~a~~~~~~~~~---~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~  100 (398)
                      .+|+.|+||..|.  ..++ .+|++.+++.+++....   ...+ .......+.+.+++.+....+...+.+++++++++
T Consensus        50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~~a~~lae~l~~~~~~~~~~v~f~~sGse  128 (461)
T d1ohwa_          50 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPAL-GILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  128 (461)
T ss_dssp             TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCT-TTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             CCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccc-cccchHHHHHHHHHHHHhhhccCcceeeeecchhh
Confidence            4688999998653  3343 48899999998775311   1111 12223345677777776655555678999999999


Q ss_pred             HHHHHHHHhc----------------------------cCCCEEEEeCCCCcChhhHHHhcCcE------------EEEe
Q 015890          101 AFVNIVLTLC----------------------------DAGDSVVMFAPYYFNSYMSFQMTGVT------------HILV  140 (398)
Q Consensus       101 a~~~~~~~l~----------------------------~~gd~Vl~~~p~~~~~~~~~~~~g~~------------~~~~  140 (398)
                      |++.+++...                            .+..+|+....+|++....+......            ....
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999988652                            12347999999999865444332210            0001


Q ss_pred             ccCCCCCC-------------CCChHHHHHhhc----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEE
Q 015890          141 GPCSSKTL-------------HPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       141 ~~~~~~~~-------------~~d~e~l~~~l~----~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~l~~~~~~~liv  202 (398)
                       +.....+             ..+.+.+++.+.    ....+.+|+++..+...|.+ .|++.+++|.++|++||+++|+
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~  287 (461)
T d1ohwa_         209 -PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV  287 (461)
T ss_dssp             -CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             -ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceec
Confidence             1110000             012344555443    23347888888777777764 6888999999999999999999


Q ss_pred             eece--eccCCCccccccC--CcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHh
Q 015890          203 DNTY--FMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL  278 (398)
Q Consensus       203 De~~--~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  278 (398)
                      ||++  ++..|........  +.+..+-+++|.++ .|    +....   .. +..........+++.++.+.+++.+.|
T Consensus       288 DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~gK~l~-~g----~~~~~---~~-~~~~~~~~~~~T~~g~p~~~aaa~a~l  358 (461)
T d1ohwa_         288 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMM-TG----GFFHK---EE-FRPNAPYRIFNTWLGDPSKNLLLAEVI  358 (461)
T ss_dssp             ECTTTCSSTTSSSSGGGGGCCSSCCSEEEECGGGS-SE----EEEEC---GG-GSCSSTTSSCCSCSSCHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccCchhhhhhhccc-cc----ccccc---cc-cccccccccccccccccccchhhcccc
Confidence            9999  6666654433221  11122337789886 33    33222   11 111122233456778888888888888


Q ss_pred             cCC--chHHHHHHHHHHHHHHHHHHHhccCCC-CccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCC
Q 015890          279 QTG--PEWVTERVKDLVRNREIIREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR  355 (398)
Q Consensus       279 ~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~  355 (398)
                      +..  ++.+++..+.-....+.+.+..++.+. +.-+... |+++.++++... ...+++..++ ++|+++.+.    .+
T Consensus       359 ~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~-Gl~~~ie~~~~~-~~~~i~~~~~-~~Gll~~~~----~~  431 (461)
T d1ohwa_         359 NIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDES-IRNKLISIAR-NKGVMLGGC----GD  431 (461)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSHH-HHHHHHHHHH-HTTEECEEE----TT
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeee-eEEEEEEcCCHH-HHHHHHHHHH-HCCeEEeeC----CC
Confidence            752  233333444444445555555555542 3334455 566677876432 2346667665 889999874    35


Q ss_pred             CeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          356 GHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       356 ~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      +.|||...- .+++++++++++|.+++.++
T Consensus       432 ~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         432 KSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             TEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence            789998766 79999999999999998763

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.85  E-value=3.4e-20  Score=173.85  Aligned_cols=331  Identities=13%  Similarity=0.067  Sum_probs=229.4

Q ss_pred             CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCC---------CcEEEecChHHHHHHHHHHhcc---
Q 015890           44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCD---  111 (398)
Q Consensus        44 ~~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~---------~~v~~~~g~t~a~~~~~~~l~~---  111 (398)
                      .++.++..+...+.+.....|..++...+++..+.+|+.+..|.+.         ..-++++|+|+++..++.+...   
T Consensus        85 ~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~  164 (476)
T d1js3a_          85 SYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (476)
T ss_dssp             CHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHH
Confidence            4667776666666665566676777888999999999999988753         2467999999999999876532   


Q ss_pred             -------CC---------CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhcc----CCCCeEEEEe
Q 015890          112 -------AG---------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVV  171 (398)
Q Consensus       112 -------~g---------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~----~~~~~~v~i~  171 (398)
                             .|         -.|++++-+|+++..++...|+.+..+ +++++ +.+|++.|++.+++    +..|-+|+.+
T Consensus       165 ~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v-~~d~~-~~md~~~L~~~i~~~~~~g~~p~~Vvat  242 (476)
T d1js3a_         165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDGK-FAMRASALQEALERDKAAGLIPFFVVAT  242 (476)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCTT-SCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HhhcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEe-ccCCC-CCcCHHHHHHHHHHHHhcCCCcEEEeec
Confidence                   11         147889999999999999999999989 88765 47999999999973    2325677788


Q ss_pred             CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece---eccCCC-cccccc-CCcEEEEcccccccCCCcceeEEEEccC
Q 015890          172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY---FMYDGR-KHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPS  246 (398)
Q Consensus       172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~---~~~~~~-~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~i~~~~  246 (398)
                      .+++.||.+-|   +++|+++|++||+|+++|.+|   +..... ...... ...+-+..+.||+++.| ..+|.++.++
T Consensus       243 aGtt~~G~iDp---l~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P-~~~g~~l~r~  318 (476)
T d1js3a_         243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKR  318 (476)
T ss_dssp             BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESC
T ss_pred             CCCccceeecc---HHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccC-Ccceeecccc
Confidence            89999999999   999999999999999999999   222221 111110 11235566999999744 4678887775


Q ss_pred             CcHHHHHHH--------HHhh----------c-cCCCCc--chHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhcc
Q 015890          247 EVEGFATQL--------LKVQ----------D-NIPICA--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP  305 (398)
Q Consensus       247 ~~~~~~~~l--------~~~~----------~-~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~  305 (398)
                        +......        ....          . ....+.  .....++....+  +.+.+++..++..+.++++.+.+++
T Consensus       319 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~--G~~g~~~~i~~~~~lA~~l~~~l~~  394 (476)
T d1js3a_         319 --RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY--GVKGLQAYIRKHVQLSHEFEAFVLQ  394 (476)
T ss_dssp             --HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --hHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHhc
Confidence              3332211        0000          0 000111  122233333333  4567888899999999999999999


Q ss_pred             CCCCccccCCccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 015890          306 LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+.+++..++..+.+++++.....-...+.+++.++..+++.+.. ..+..++|++++.  +++++++.+++.|++..++
T Consensus       395 ~~~fel~~~p~l~iV~Fr~~~~d~~n~~l~~~l~~~G~~~~s~t~-~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~a~~  473 (476)
T d1js3a_         395 DPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCR-LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE  473 (476)
T ss_dssp             CTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEECCCceEEEEEEccCChHHHHHHHHHHHhcCCEEEeeee-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            887777766657777777753221234677777644345554422 2234589999874  6788999999999999888


Q ss_pred             Hh
Q 015890          384 LV  385 (398)
Q Consensus       384 ~~  385 (398)
                      +.
T Consensus       474 ll  475 (476)
T d1js3a_         474 LL  475 (476)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.84  E-value=5e-18  Score=153.73  Aligned_cols=283  Identities=20%  Similarity=0.203  Sum_probs=201.1

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~  146 (398)
                      ...++.+.+.+..+.|  .+..++++||.+|+..++.+++++||.|++....|.+..    ..+..+|+++.++ +..  
T Consensus        58 nPT~~~le~~la~LEg--~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~-d~~--  132 (394)
T d1e5ea_          58 NPTVSNLEGKIAFLEK--TEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-NTA--  132 (394)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT--
T ss_pred             CHHHHHHHHHHHHHhC--CcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeecc-CCC--
Confidence            4456666666666555  456788899999999999999999999999999996644    3567789999888 321  


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEeece-eccCCCccccccCCcEEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTY-FMYDGRKHCCVEGDHVVN  224 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~-~~~~~livDe~~-~~~~~~~~~~~~~~~~i~  224 (398)
                          |.+.+++.+++++  ++|+++.|.||+..+.+   ++++++.++ ++|+++|+|.++ -++.-   .+...+.+++
T Consensus       133 ----d~~~~~~~i~~~t--~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~~---~Pl~~GaDiV  200 (394)
T d1e5ea_         133 ----IPGEVKKHMKPNT--KIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT---NPVDFGVDVV  200 (394)
T ss_dssp             ----STTHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC---CGGGGTCSEE
T ss_pred             ----CHHHHHHhhcccc--cEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCcccC---CchhcCCCEE
Confidence                6678999999886  99999999999999999   888888665 568999999988 33211   1122334589


Q ss_pred             EcccccccCC-CcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Q 015890          225 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE  301 (398)
Q Consensus       225 ~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~  301 (398)
                      +.|.+|.++- ...-.|.++++   .+.....+.  .+.....+.++...+.+...|+.    +.-+.++..+++..+.+
T Consensus       201 vhS~TKy~~GhsDv~~G~v~~~---~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T----L~lRm~r~~~nA~~lA~  273 (394)
T d1e5ea_         201 VHSATKYINGHTDVVAGLICGK---ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAE  273 (394)
T ss_dssp             EEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHH
T ss_pred             EechhhhcCCCcccccccccch---hhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh----HHHHHHHHHHHHHHHHH
Confidence            9999999963 33556777777   566655433  23344666788888888888876    67788888999999999


Q ss_pred             HhccCCCC-ccccC-----------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC----------
Q 015890          302 ALSPLGEG-AVKGG-----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------  353 (398)
Q Consensus       302 ~l~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------  353 (398)
                      .|++++.+ +|..|                 .++. +.+.+..    ..+...+++++-.+... +..++          
T Consensus       274 ~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~-~sf~~~~----~~~~a~~f~~~l~l~~~-a~SlGg~eSLi~~p~  347 (394)
T d1e5ea_         274 YLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSM-ITFILKS----GFEGAKKLLDNLKLITL-AVSLGGCESLIQHPA  347 (394)
T ss_dssp             HHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSE-EEEEETT----HHHHHHHHHHTCSSSEE-SSCCCSSSCEEECGG
T ss_pred             HHhhcCCccEEeCCCcccccchhhhhcccccCCCe-eeeeccC----CHHHHHHHHHhCCccce-eeccCCccceeECcc
Confidence            99988764 23322                 1233 3334432    34445556655554321 11111          


Q ss_pred             -----------------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHhc
Q 015890          354 -----------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK  386 (398)
Q Consensus       354 -----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (398)
                                       .++.||+|++-   |+.+.+++.|.++++++.+
T Consensus       348 ~~th~~~~~~~r~~~Gi~~~liRlSVGl---Ed~eDLi~Dl~qAl~~l~~  394 (394)
T d1e5ea_         348 SMTHAVVPKEEREAAGITDGMIRLSVGI---EDADELIADFKQGLDALLR  394 (394)
T ss_dssp             GTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred             ccccccCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHHhhC
Confidence                             13579999996   7777888999999988753

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.1e-19  Score=170.82  Aligned_cols=308  Identities=15%  Similarity=0.069  Sum_probs=193.8

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CcEEEecChHHHHH-HHHHHh---ccCCCEEEEeCCCCcChhhHHHhcCcEEEEecc-CC
Q 015890           71 PELRDALVKKLNQENKLYK-SSVMVTAGANQAFV-NIVLTL---CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP-CS  144 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~-~~v~~~~g~t~a~~-~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~  144 (398)
                      ..+...+.+++.+.+|.+. ...++++|+|++.. +++.++   ..+++.|+++...|.++..++...|++++.+.+ .+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~  172 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLE  172 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred             HHHHHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeecc
Confidence            4577778888888888764 45667777775444 444443   245689999999999999999999999888722 12


Q ss_pred             CCCCCCChHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-ec--cCCCc-c-ccc
Q 015890          145 SKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FM--YDGRK-H-CCV  217 (398)
Q Consensus       145 ~~~~~~d~e~l~~~l~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~--~~~~~-~-~~~  217 (398)
                      .+.+.+|+++|++++++  ...+.+|+++.|+|++|.+.+   +++|+++|+++|+++|+|++| ..  +.... . ...
T Consensus       173 ~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~  249 (445)
T d3bc8a1         173 GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGAR  249 (445)
T ss_dssp             TTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHH
T ss_pred             CcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh---HHHHHHHHHHhCCcEEEEccchhhhhhccccchhccC
Confidence            34468999999999963  112478888899999999999   999999999999999999998 21  11111 1 111


Q ss_pred             cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 015890          218 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE  297 (398)
Q Consensus       218 ~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  297 (398)
                      ..+.++++.|.+|.++. +...|+++.++  ....+.+...........+....++....+.  .....+..+....+.+
T Consensus       250 ~~~vd~~~~s~hK~~~~-p~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~  324 (445)
T d3bc8a1         250 VGRIDAFVQSLDKNFMV-PVGGAIIAGFN--EPFIQDISKMYPGRASASPSLDVLITLLSLG--CSGYRKLLKERKEMFV  324 (445)
T ss_dssp             HSCCCEEEEEHHHHHSC-CSSCEEEEESC--HHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred             cCCcceEEecCcccccc-CCCCceeeeCC--hHHHHHHHHHHhhcccCcchHHHHHHHHHHh--hhcchhhHHHHHHHHH
Confidence            12344778899998863 33457777765  6666666554443333333344443333332  2333444444444444


Q ss_pred             HHHHHhc----cCCCCccccCCccEEEEeeCCC--C--CCChHHHHHHHHHhcCeEEec----CCC----------CC--
Q 015890          298 IIREALS----PLGEGAVKGGEGAIYLWARLPE--K--HLDDFEVVRWLAHRHGVVVIP----GGA----------CG--  353 (398)
Q Consensus       298 ~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~ll~~~gi~v~~----g~~----------~~--  353 (398)
                      ++.+.|+    ..+......+......++.+..  .  ..+..++...| .+.||....    +..          ++  
T Consensus       325 ~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L-~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~  403 (445)
T d3bc8a1         325 YLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSGHTFRGFMSH  403 (445)
T ss_dssp             HHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETTEEEETTTTT
T ss_pred             HHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHH-HHcCCCcceeeccccccchhhhhhhhcCCC
Confidence            4444443    3343222223323333333321  1  12334555555 477773211    110          11  


Q ss_pred             ----CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHhcc
Q 015890          354 ----CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD  387 (398)
Q Consensus       354 ----~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~~~~  387 (398)
                          ...++|++++. ++++|++.+++.|.++++++.+.
T Consensus       404 ~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~  442 (445)
T d3bc8a1         404 ADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE  442 (445)
T ss_dssp             SSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                13569998887 89999999999999999998764

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.83  E-value=2e-18  Score=153.24  Aligned_cols=277  Identities=19%  Similarity=0.169  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChh----hHHHhcCcEEEEeccCCCCC
Q 015890           72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKT  147 (398)
Q Consensus        72 ~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~  147 (398)
                      .|++.+++.-    |  .+..+++++|.+|+..++.+++++||+|+++.+.|.+..    ..++.+|+++.++ +..   
T Consensus         2 aLE~~la~Le----g--~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~-d~~---   71 (331)
T d1pffa_           2 ALEGKIAKLE----H--AEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DMA---   71 (331)
T ss_dssp             HHHHHHHHHH----T--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT---
T ss_pred             HHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEe-ccc---
Confidence            3556666653    3  456788899999999999999999999999999997644    4467889999888 332   


Q ss_pred             CCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       148 ~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~-~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                         |.+.+++++++++  ++|+++.|.||+..+.+   ++++++++ +++|+++|+|.++ -++.-.+   ...+.++++
T Consensus        72 ---d~~~~~~~i~~~t--~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~~p---l~~GaDiVv  140 (331)
T d1pffa_          72 ---VPGNIEKHLKPNT--RIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTNP---LDLGVDIVV  140 (331)
T ss_dssp             ---STTHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCCG---GGGTCSEEE
T ss_pred             ---chhhHhhhccccc--ceeeeeccccccccccc---chhhhhhhhcccCceEEeeccccccccccc---cccCCCEEE
Confidence               7788999999876  99999999999999999   78777774 6789999999988 2221111   122345889


Q ss_pred             cccccccCC-CcceeEEEEccCCcHHHHHHHHH--hhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Q 015890          226 FSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA  302 (398)
Q Consensus       226 ~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (398)
                      .|++|.++- ...-.|.++.+   ++.......  .........++...+.+...++.    +..+.+++.++...+.+.
T Consensus       141 ~S~TKy~~Gh~d~~~G~v~~~---~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T----l~~Rm~~~~~nA~~lA~~  213 (331)
T d1pffa_         141 HSATKYINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAEF  213 (331)
T ss_dssp             EETTTTTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred             ecchhhcCCCCcccccccccc---ccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence            999999963 33556778877   555444332  23334556677777777777665    677888889999999999


Q ss_pred             hccCCCC-ccccCC----------------ccEEEEeeCCCCCCChHHHHHHHHHhcCeEE---ecCCCC----------
Q 015890          303 LSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVV---IPGGAC----------  352 (398)
Q Consensus       303 l~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v---~~g~~~----------  352 (398)
                      |++++.+ +|+.|.                ++..+.+.+..     .+...++.++-.+.-   .-|...          
T Consensus       214 L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~-----~~~~~~f~d~l~lf~~~~SlG~~~SLi~~p~~~~  288 (331)
T d1pffa_         214 LHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG-----LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMT  288 (331)
T ss_dssp             HHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-----HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHT
T ss_pred             hhhCCcEEeeccccccCccHHHHHhhcccccCcccceeecc-----HHHHHHHHHhCCcceecccCCCCceeEeCccccc
Confidence            9887764 333221                13334455541     233444555544322   112111          


Q ss_pred             ------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                  + .++.||+|++-   |+.+.+++.|.++++.+
T Consensus       289 h~~~~~e~~~~~Gi~~~liRlsvGl---E~~~DLi~Dl~~AL~~i  330 (331)
T d1pffa_         289 HAGVPKEEREAAGLTDNLIRLSVGC---ENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             STTSCHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHHHTC
T ss_pred             cccCCHHHHHhcCCCcCeEEEEeee---CCHHHHHHHHHHHHHHh
Confidence                        0 14679999997   66777778888888754

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=4.8e-18  Score=154.43  Aligned_cols=284  Identities=18%  Similarity=0.152  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~  146 (398)
                      ...++.+.+.+..+.+  .+..+++++|.+|+..++.+++++||+|+++...|.+...    .+..+|+++.++ ...  
T Consensus        57 nPT~~~LE~~la~LE~--~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~-d~~--  131 (421)
T d2ctza1          57 NPTVDVLEKRLAALEG--GKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-SRE--  131 (421)
T ss_dssp             CHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-CTT--
T ss_pred             CHHHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceec-ccc--
Confidence            4456666666666555  3567889999999999999999999999999999977554    456789998877 321  


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEE
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNL  225 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~  225 (398)
                         -+.+..+..+++++  ++|++++|.||+..+.+   |++|+++|+++|+++|+|..+ ...-.  ..+...+.++++
T Consensus       132 ---~~~~~~~~~~~~~t--~li~~EtpsNP~l~v~D---i~~i~~iA~~~g~~~vvDnT~a~tP~~--~~Pl~~GaDiVv  201 (421)
T d2ctza1         132 ---ERPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYL--LRPLAWGAALVT  201 (421)
T ss_dssp             ---CCHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTS--CCGGGGTCSEEE
T ss_pred             ---cCcchhccccCCCc--eEEEEcCCCcceeEecc---hHHHHHHHHhcCCceEeccccccccee--ccccccCCcEEE
Confidence               13456677777776  99999999999999999   999999999999999999987 22211  122333456899


Q ss_pred             cccccccCC-CcceeEEEEccCCc----------------------------HHHHHHH-HHhhccCCCCcchHHHHHHH
Q 015890          226 FSFSKAYGM-MGWRVGYIAYPSEV----------------------------EGFATQL-LKVQDNIPICASIISQHLAL  275 (398)
Q Consensus       226 ~s~sK~~~~-~G~r~G~i~~~~~~----------------------------~~~~~~l-~~~~~~~~~~~~~~~~~~~~  275 (398)
                      .|.+|.++- ...-.|.++.++..                            ..++.+. .........++++...+.+.
T Consensus       202 hS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~  281 (421)
T d2ctza1         202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVL  281 (421)
T ss_dssp             EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred             EechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCHHHHHHHh
Confidence            999999963 23445777655310                            0011111 11112235677888888888


Q ss_pred             HHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCC-ccccC-----------------CccEEEEeeCCCCCCChHHHHHH
Q 015890          276 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEG-AVKGG-----------------EGAIYLWARLPEKHLDDFEVVRW  337 (398)
Q Consensus       276 ~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~  337 (398)
                      ..|+.    +.-+.+++.++...+.+.|++++.+ +|..|                 ..|..+.+.+..    +.+...+
T Consensus       282 rgl~T----L~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~----~~~~a~~  353 (421)
T d2ctza1         282 LGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG----GYEAAKR  353 (421)
T ss_dssp             HHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT----HHHHHHH
T ss_pred             cCCcc----hhhHHHHHHHHHHHHHhhhccCCCeeEEecCCcCCCccHHHHHHhcCCCCceEEEEEecC----CHHHHHH
Confidence            88876    6777888889999999999987763 33222                 113345556642    3444555


Q ss_pred             HHHhcCeEEecCCCCC---------------------------CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 015890          338 LAHRHGVVVIPGGACG---------------------------CRGHLRISFGGLVEDDCKAAADRLRRGL  381 (398)
Q Consensus       338 ll~~~gi~v~~g~~~~---------------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~~  381 (398)
                      ++++-.+.- .+..++                           .++.||+|++-   |+.+.+++.|.+++
T Consensus       354 f~~~L~l~~-~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~GI~~~liRlSvGl---Ed~eDLi~DL~qAL  420 (421)
T d2ctza1         354 FISRLKLIS-HLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL  420 (421)
T ss_dssp             HHHTCSSSE-ECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred             HHHcCCcCe-eccccccccceeeCcccccchhCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHhc
Confidence            555544422 111111                           14689999997   56666777777664

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=2.8e-18  Score=155.16  Aligned_cols=282  Identities=20%  Similarity=0.208  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHH----HhcCcEEEEeccCCCC
Q 015890           71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK  146 (398)
Q Consensus        71 ~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~  146 (398)
                      ....+.+.+.+..+.+  .+..+++++|.+|+..++ .++.+||.|++....|.+....+    ..+|.++..+ +    
T Consensus        54 nPT~~~lE~~la~LE~--~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~-~----  125 (393)
T d1n8pa_          54 NPNRENLERAVAALEN--AQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-N----  125 (393)
T ss_dssp             CHHHHHHHHHHHHHTT--CSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-S----
T ss_pred             ChHHHHHHHHHHHHhC--CceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEe-e----
Confidence            4566677777766665  355677888888987554 66788999999999998766544    4556676665 2    


Q ss_pred             CCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH----HcCCEEEEeece-eccCCCccccccCCc
Q 015890          147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK----AAGSWLVVDNTY-FMYDGRKHCCVEGDH  221 (398)
Q Consensus       147 ~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~----~~~~~livDe~~-~~~~~~~~~~~~~~~  221 (398)
                         .+.+++++.+++++  ++|+++.|.||+..+.+   +++++++|+    ++|+++|+|.++ .++.-.+   ...+.
T Consensus       126 ---~~~~~~~~~i~~~t--~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~~~P---l~~GA  194 (393)
T d1n8pa_         126 ---DLLNDLPQLIKENT--KLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYISNP---LNFGA  194 (393)
T ss_dssp             ---SHHHHHHHHSCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCG---GGGTC
T ss_pred             ---cchHHHHHHhhhhc--ceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCcccCCc---hhhCC
Confidence               24578999998876  99999999999999999   888888888    678999999998 3331111   12234


Q ss_pred             EEEEcccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 015890          222 VVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR  300 (398)
Q Consensus       222 ~i~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  300 (398)
                      ++++.|++|.++- ...-.|.++.++  +++.+++...+......+++...+.+...++.    +.-+.++..+++..+.
T Consensus       195 DiVvhS~TKyi~GhsDv~~G~v~~~~--~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T----l~lR~~~~~~nA~~lA  268 (393)
T d1n8pa_         195 DIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSANKIA  268 (393)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred             CEEEEccccccCCCCccccceeeecc--hhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc----hhhHHHHHHHHHHHHH
Confidence            5889999999953 335678877664  67778887777666777888888888888876    6777788888888899


Q ss_pred             HHhccC-CC-CccccC------------------CccEEEEeeCCCCCCChHHHHHHHHHhcCeEE-ec--CCCC-----
Q 015890          301 EALSPL-GE-GAVKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV-IP--GGAC-----  352 (398)
Q Consensus       301 ~~l~~~-~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v-~~--g~~~-----  352 (398)
                      +.|+.. +. .++..|                  .++..+.+.+..    ..+...++++.-.+.- .+  |...     
T Consensus       269 ~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~----~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~  344 (393)
T d1n8pa_         269 EFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKG----GAEAASKFASSTRLFTLAESLGGIESLLEV  344 (393)
T ss_dssp             HHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESS----CHHHHHHHHHHCSSSEECSCCCCSSCEEEC
T ss_pred             HHHHhccCcEEEEecccccccccchhhhhccccCCCCceEEEEEeC----CHHHHHHHHHhCCcceecccCCCcCceEeC
Confidence            988754 32 122211                  123455556643    2233334444444322 11  1110     


Q ss_pred             -----------------C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 015890          353 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       353 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~~~~~  384 (398)
                                       + .++.||||++-   |+.+.+++.|.+++++.
T Consensus       345 p~~~~h~~~~~~~r~~~gi~~~liRlSvGl---E~~~DLi~Dl~~AL~~a  391 (393)
T d1n8pa_         345 PAVMTHGGIPKEAREASGVFDDLVRISVGI---EDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             TTTTTSCSSCTTTTTTTSCCTTEEEEECCS---SCHHHHHHHHHHHHHHH
T ss_pred             chhhccccCCHHHHHhcCCCcCEEEEEecc---CCHHHHHHHHHHHHHHh
Confidence                             0 13579999996   77778888888888764

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.82  E-value=1.2e-18  Score=164.41  Aligned_cols=312  Identities=13%  Similarity=0.063  Sum_probs=192.1

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCC-------EEEEeCCCCcChhhHHHhcC
Q 015890           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD-------SVVMFAPYYFNSYMSFQMTG  134 (398)
Q Consensus        62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd-------~Vl~~~p~~~~~~~~~~~~g  134 (398)
                      ..|+.+++..++++.+++++    |  .+.+++++||++|+..++.+++++|+       .++.....+..+.......|
T Consensus        69 ~~y~~~~~~~~le~~~a~l~----g--~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~g  142 (465)
T d1ax4a_          69 EAYAGSRNYYDLKDKAKELF----N--YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNG  142 (465)
T ss_dssp             CCSSSCHHHHHHHHHHHHHH----C--CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTT
T ss_pred             hhhccChHHHHHHHHHHHHH----C--CCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHcC
Confidence            35877777788999998887    4  46899999999999999999976443       34444433334444567778


Q ss_pred             cEEEEec--------cCCCCCCCCChHHHHHhhccCC--CCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEe
Q 015890          135 VTHILVG--------PCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVD  203 (398)
Q Consensus       135 ~~~~~~~--------~~~~~~~~~d~e~l~~~l~~~~--~~~~v~i~~p~nptG-~~~~~~~l~~i~~l~~~~~~~livD  203 (398)
                      ..++...        +.+...+.+|++.+++++++.+  .+.++++..++|..| ..++.+++++|.++|++||+++|+|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D  222 (465)
T d1ax4a_         143 CKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMD  222 (465)
T ss_dssp             CEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEE
Confidence            8777551        1223345789999999997321  135566666666654 4689999999999999999999999


Q ss_pred             ece-ecc-----------CCCccccc----cCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-ccC
Q 015890          204 NTY-FMY-----------DGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q-DNI  262 (398)
Q Consensus       204 e~~-~~~-----------~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~----~-~~~  262 (398)
                      +++ ...           .+......    ..-..++..|.+|..+  +++.|+++.++. ..........    . ...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~--~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~  299 (465)
T d1ax4a_         223 SARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPL--LNIGGLVAIRDN-EEIFTLARQRCVPMEGFVT  299 (465)
T ss_dssp             CTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTC--CSSCEEEEESSC-HHHHHHHHHHHHHHTCSTT
T ss_pred             CcchhhhhcccccccccccccchhhhccccccccceeEeecccCcc--cccceeEeecch-HHHHHhhhccccccccCCC
Confidence            998 211           01000000    0012355666777664  556788888753 2222222211    1 111


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCccEEEEeeCCCCC-------CChHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVV  335 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  335 (398)
                      ..+.......++...+....  .+...++..++.+++.+.|++.+. .+..+.+++++.+......       .......
T Consensus       300 ~~~~~~~~~~a~~~~~~e~~--~~~~~~~~~~~~~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (465)
T d1ax4a_         300 YGGLAGRDMAAMVQGLEEGT--EEEYLHYRIGQVKYLGDRLREAGI-PIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVI  376 (465)
T ss_dssp             TTTCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTTC-CBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHH
T ss_pred             cchhhHHHHHHHhhhhHHhh--hHHHHHHHHHHHHHHHHHHHhhcC-ccccCCCcceeeeehhhhcCCCccccchhHHHH
Confidence            12223333333333333211  123344445566778888887776 4555555666655543211       1234456


Q ss_pred             HHHHHhcCeEEecCCCC-------------CCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHh
Q 015890          336 RWLAHRHGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       336 ~~ll~~~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .+++.+.||........             ...+.+|+++..  .|++|++.+++.|.+++++..
T Consensus       377 ~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~~  441 (465)
T d1ax4a_         377 NALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA  441 (465)
T ss_dssp             HHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred             HHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            66777889976543221             124579998753  489999999999999887754

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.80  E-value=1.5e-18  Score=158.45  Aligned_cols=329  Identities=13%  Similarity=0.036  Sum_probs=195.8

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCC---C----CCCCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHH-HH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSI---S----KYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQ-AF  102 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~---~----~y~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~-a~  102 (398)
                      ..+|+-|  |...|++|+++|.+.+.+...   .    ++ .++...++.+.+++.++++++.+.+ .|++++|++. ++
T Consensus         4 ~~~F~pG--P~~vp~~V~eam~~~~~~~~~~~~~~~~~sH-Rs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~   80 (361)
T d2c0ra1           4 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSH-RGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF   80 (361)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCT-TSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred             CcccCCC--CcCCCHHHHHHHHHHHhhhcccCccccccCc-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH
Confidence            4566554  667899999999998865211   0    11 2344567777788888888888643 6777666654 44


Q ss_pred             HHHHHHhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          103 VNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       103 ~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      .++...+..+|+++++...+.++  +...++..|..+..+ ..+.. ...+++.+++.+...+   .+.+   +|.||..
T Consensus        81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~---~~~v---~~~tg~~  152 (361)
T d2c0ra1          81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAA-SSEAS-NYMTLPKLQEIQLQDN---AAYL---HLTSNET  152 (361)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEE-ECGGG-TTCSCCCGGGCCCCTT---EEEE---EEESEET
T ss_pred             HHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeee-ccccc-cccchhhhhhhcccCc---ceEE---EEecccc
Confidence            66666777888888876655533  556778889887777 55433 3457778888777653   3332   4678998


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCC--------cHHH
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--------VEGF  251 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~--------~~~~  251 (398)
                      .+   +.++.++|+++|+++++|.++ ++...  ......+  +++.|.+|.++++|...+++.....        ....
T Consensus       153 ~~---~~~i~~~~~~~~al~~vDavss~g~~~--id~~~~d--i~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T d2c0ra1         153 IE---GAQFKAFPDTGSVPLIGDMSSDILSRP--FDLNQFG--LVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLR  225 (361)
T ss_dssp             TT---TEECSSCCCCTTSCEEEECTTTTTSSC--CCGGGCS--EEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGC
T ss_pred             ee---cceEEEeeccCCceEEEEeeccccccc--cccccce--eEEEecccccccccCcEEEEEhHHhhhCccccccccc
Confidence            88   778888999999999999999 65433  3333344  4556779999877643333332210        0000


Q ss_pred             HHHHHHhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCC-Ccccc---CCccEEEEeeCC
Q 015890          252 ATQLLKVQDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGE-GAVKG---GEGAIYLWARLP  325 (398)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~---~~~~~~~~~~~~  325 (398)
                      .......... ..+.+......+......  .........++.++.+..+......... .....   ......+.+.++
T Consensus       226 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~  304 (361)
T d2c0ra1         226 YDTYVKNNSL-YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLA  304 (361)
T ss_dssp             HHHHHHTTTC-SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECS
T ss_pred             cccccccccc-cccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECC
Confidence            1111111111 122222222222222211  1222344444455555544444443222 11111   111234556666


Q ss_pred             CCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          326 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       326 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      +.. +..++...| +++||.+.+|..+  -+.||||+.. .+.||++++++.|++..++
T Consensus       305 ~~~-~~~~~~~~L-~~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         305 SEE-LEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             CHH-HHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             Ccc-cHHHHHHHH-HHCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            432 445666654 7999999988533  2459999887 7999999999999987654

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.80  E-value=1.9e-17  Score=151.64  Aligned_cols=307  Identities=12%  Similarity=0.083  Sum_probs=196.6

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHh-ccCCCEEEEeCCCCcChh
Q 015890           49 MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSY  127 (398)
Q Consensus        49 ~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l-~~~gd~Vl~~~p~~~~~~  127 (398)
                      ++++.+.+.+++.++.  .+....+++.++++++      .+.+++++|+|.|+.+++.++ +++||+|++|..+|....
T Consensus         4 ~~~~~~~l~~~~~~~~--G~~~~~fE~~~~~~~~------~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~   75 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPL--GEFVNRFEQSVKDYSK------SENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV   75 (374)
T ss_dssp             HHHHHHHHHHTTTSCT--THHHHHHHHHHHHHHC------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT
T ss_pred             HHHHHHHHhcCCcCCC--CHHHHHHHHHHHHHHC------cCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhH
Confidence            4556666655433322  3335778888888873      357899999999999999998 788999999999999999


Q ss_pred             hHHHhcCcEEEEeccCCCCCCCCChHHHH--HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeec
Q 015890          128 MSFQMTGVTHILVGPCSSKTLHPDADWLE--KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT  205 (398)
Q Consensus       128 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~--~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~  205 (398)
                      ..+...|++++.+ +++++....+.+..+  .....+  +++|++.+   ..|...+   ++++.++|+++|++||.|.+
T Consensus        76 ~~~~~~g~~pv~~-Di~~~~~~~~~~~~~~~~~~~~~--~~aii~~~---~~G~~~d---~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          76 APICYLKAKPVFI-DCDETYNIDVDLLKLAIKECEKK--PKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             HHHHHTTCEEEEE-CBCTTSSBCHHHHHHHHHHCSSC--CCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECT
T ss_pred             HHHhhccceeEec-ccccccccccccccccchhcccc--cccccccc---cccchhh---hHHHHHHhhccCcchhhhhh
Confidence            9999999999999 887665444444433  344444  48888764   4677777   99999999999999999999


Q ss_pred             e-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------------cCCCCcch
Q 015890          206 Y-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--------------NIPICASI  268 (398)
Q Consensus       206 ~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~--------------~~~~~~~~  268 (398)
                      + ++  +.+..... .++..++.+..+|.++.+|  .|.+++++  +++.+.+..++.              +..+.++.
T Consensus       147 ~a~g~~~~~~~~G~-~gd~~~fSf~~~K~l~tge--GG~i~tnn--~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~e  221 (374)
T d1o69a_         147 EALGSFYKNKALGT-FGEFGVYSYNGNKIITTSG--GGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGYNYRLSN  221 (374)
T ss_dssp             TCTTCEETTEETTS-SSSEEEEECCTTSSSCCSS--CEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCH
T ss_pred             hhhcceECCeecCC-CCceEEEeccCcccccccc--ceeehhhh--HHHHHhhccccccccccccccccccCCccccccc
Confidence            9 43  34433222 2343344444468886433  57888877  788887765542              12334566


Q ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCcccc----CC-ccEEEEeeCCC-----------------
Q 015890          269 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG----GE-GAIYLWARLPE-----------------  326 (398)
Q Consensus       269 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~-~~~~~~~~~~~-----------------  326 (398)
                      ...+.+...|+.    +.+..++-++.++.+.+.|..........    .. .-.+..+....                 
T Consensus       222 i~Aaig~~qL~~----l~~~i~~r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (374)
T d1o69a_         222 VLGAIGVAQMEV----LEQRVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNI  297 (374)
T ss_dssp             HHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCC
T ss_pred             hhhhhhHHHHhh----hhhhcchhHHHHHHHHhhccccccccccccCCCCChhheeeeeccccccccccccccccchhhc
Confidence            666666666664    33444444455566666666543211110    10 01122222111                 


Q ss_pred             -CCCChHHHHHHHHHhcCeEEecCCCCC-------------C-------CCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 015890          327 -KHLDDFEVVRWLAHRHGVVVIPGGACG-------------C-------RGHLRISFGG-LVEDDCKAAADRLRRGLE  382 (398)
Q Consensus       327 -~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~  382 (398)
                       ......++.+.| +++||.+++....-             .       ...|.+-+.. .+.+|++..++.|.++++
T Consensus       298 ~~~~~r~~l~~~L-~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk  374 (374)
T d1o69a_         298 TLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK  374 (374)
T ss_dssp             CCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             cchhhHHHHHHHH-HHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHHHHHHHHHHHHC
Confidence             001234566666 68999887754210             0       1245554544 699999999999988763

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.79  E-value=9.9e-17  Score=146.54  Aligned_cols=311  Identities=13%  Similarity=0.094  Sum_probs=211.1

Q ss_pred             cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhc-cCC--CEEEEeCC
Q 015890           45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-DAG--DSVVMFAP  121 (398)
Q Consensus        45 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~-~~g--d~Vl~~~p  121 (398)
                      .++-++++.+.+.++.   |...+...++++.+++++    |  .+.+++++|+|.|+.+++.++. .+|  ++|+++..
T Consensus        11 ~~~~~~~v~~~l~~~~---~~~G~~v~~fE~~~~~~~----g--~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~   81 (371)
T d2fnua1          11 DKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL----G--VKHALVFNSATSALLTLYRNFSEFSADRNEIITTPI   81 (371)
T ss_dssp             CHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH----T--CSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSS
T ss_pred             CHHHHHHHHHHHcCCC---ccCCHHHHHHHHHHHHHH----C--cCeEEEEecHHHHHHHHHHHhcccCCCCCeeecccc
Confidence            3666788888886643   333445677888888887    4  3568999999999999999984 344  58999999


Q ss_pred             CCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015890          122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV  201 (398)
Q Consensus       122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~li  201 (398)
                      ++......+...|++++.+ +++.+++ .+.+.+++.+..++  ++|++.+   ..|...+   ++++.++|+++|+++|
T Consensus        82 t~~a~~~ai~~~G~~pv~v-Di~~~~~-~~~~~~~~~~~~~t--~avi~vh---~~G~~~~---~~~i~~~~~~~~i~lI  151 (371)
T d2fnua1          82 SFVATANMLLESGYTPVFA-GIKNDGN-IDELALEKLINERT--KAIVSVD---YAGKSVE---VESVQKLCKKHSLSFL  151 (371)
T ss_dssp             SCTHHHHHHHHTTCEEEEC-CBCTTSS-BCGGGSGGGCCTTE--EEEEEEC---GGGCCCC---HHHHHHHHHHHTCEEE
T ss_pred             cccccceeeeccCcccccc-ccccccc-ccchhhhhhccchh--hcccccc---ccccccc---cccccccccccchhhc
Confidence            9999999999999999999 8887764 56678888888765  8888764   5688888   8899999999999999


Q ss_pred             Eeece-ec--cCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHHHHhhc----------------cC
Q 015890          202 VDNTY-FM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD----------------NI  262 (398)
Q Consensus       202 vDe~~-~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l~~~~~----------------~~  262 (398)
                      .|.++ ++  +.+.... ..++..++.+..+|.++..+  .|.+++++  +++.+.+.....                +.
T Consensus       152 EDaaqa~Ga~~~~~~~G-~~g~~~~~Sf~~~K~l~~g~--GG~i~t~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~  226 (371)
T d2fnua1         152 SDSSHALGSEYQNKKVG-GFALASVFSFHAIKPITTAE--GGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVKSIGH  226 (371)
T ss_dssp             EECTTCTTCEETTEETT-SSSSEEEEECCTTSSSCCSS--CEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEESSCCC
T ss_pred             cchhhccCceeccccCC-cccccccccccccccccccc--ceEEEeec--hhhhhhcccccccccccccccccccccccc
Confidence            99999 43  2332222 22333444445589886433  68888887  788888876542                12


Q ss_pred             CCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccC----Ccc-EEEEeeCCCCC-CChHHHHH
Q 015890          263 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGA-IYLWARLPEKH-LDDFEVVR  336 (398)
Q Consensus       263 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----~~~-~~~~~~~~~~~-~~~~~~~~  336 (398)
                      .+.++....+.+...|+.    +++..+.-+++...+.+.|++.+......+    ... ..+.+.+.... ....++.+
T Consensus       227 n~r~sel~Aaigl~qL~~----l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~  302 (371)
T d2fnua1         227 NFRLNEIQSALGLSQLKK----APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILE  302 (371)
T ss_dssp             BCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHH
T ss_pred             cccccchhhhhhhhhhhh----ccchhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhHHHHHHH
Confidence            333555566666666654    445555555666777788887765333221    111 12223333221 12356667


Q ss_pred             HHHHhcCeEEecCCCC-----------CC----------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 015890          337 WLAHRHGVVVIPGGAC-----------GC----------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL  384 (398)
Q Consensus       337 ~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~~  384 (398)
                      .| +++||-+++....           ..          ...+.+-+.. .+.+|+++.++.|.++++.+
T Consensus       303 ~L-~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~  371 (371)
T d2fnua1         303 SL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF  371 (371)
T ss_dssp             HH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HH-HHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHHcC
Confidence            66 5899998765321           00          1256665544 69999999999999988763

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.78  E-value=5.5e-18  Score=159.73  Aligned_cols=302  Identities=11%  Similarity=0.042  Sum_probs=173.9

Q ss_pred             CCCCcHHHHHHHHHHHhhhcCCCCCcEEE-ecChHHHHHHHHHHhccCCCEEEEeCCCCcChhhHHHhc-CcEEEEe-cc
Q 015890           66 ADEGLPELRDALVKKLNQENKLYKSSVMV-TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT-GVTHILV-GP  142 (398)
Q Consensus        66 ~~~~~~~~~~~l~~~l~~~~~~~~~~v~~-~~g~t~a~~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~-~~  142 (398)
                      +..-..++++.+++++    |.  +..++ ++|+|+++.+++.+++++||+|+++..+|.+....+... +..+++. .+
T Consensus        64 ~~~~i~eae~~~A~~~----ga--~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~  137 (462)
T d1c4ka2          64 HEGPAVAAEKHAARVY----NA--DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTN  137 (462)
T ss_dssp             TBTHHHHHHHHHHHHT----TC--SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEE
T ss_pred             CCHHHHHHHHHHHHHh----CC--CeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeecc
Confidence            3444566777777776    54  44445 566677788889999999999999999998877655444 3333332 13


Q ss_pred             CCCCCC-------CCChHHH---------HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece
Q 015890          143 CSSKTL-------HPDADWL---------EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY  206 (398)
Q Consensus       143 ~~~~~~-------~~d~e~l---------~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~  206 (398)
                      .++.+.       .++.+.+         +.....++  ..+++...+|..|.+.+   +++|+++|+++|+++++|+++
T Consensus       138 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~~~~~G~~~d---l~~I~~ia~~~g~~l~vD~A~  212 (462)
T d1c4ka2         138 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRP--FRLAVIQLGTYDGTIYN---AHEVVKRIGHLCDYIEFDSAW  212 (462)
T ss_dssp             ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCC--BSEEEEESBCTTSEEEC---HHHHHHHHGGGBSEEEEECTT
T ss_pred             cccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCC--ceeEEEEeeeeccchhh---HHHHHHHHHHcCCEEEEechh
Confidence            444332       1222222         23333444  44444445567999999   999999999999999999999


Q ss_pred             -ecc--CCC-cccc--------ccCCcEEEEcccccccCCCcceeEEEEccCCcHHH--------HHHHHHhhc-cCCCC
Q 015890          207 -FMY--DGR-KHCC--------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--------ATQLLKVQD-NIPIC  265 (398)
Q Consensus       207 -~~~--~~~-~~~~--------~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~--------~~~l~~~~~-~~~~~  265 (398)
                       ...  .+. +...        ...+.++++.|+||.+|.++  .|.++..++ ..+        ...+..... ..+.+
T Consensus       213 ~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~s  289 (462)
T d1c4ka2         213 VGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKD-SHIKGQLRYCDHKHFNNSFNLFMSTS  289 (462)
T ss_dssp             CCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEEC-GGGTTSTTCCCHHHHHHHHHHHSCSS
T ss_pred             hccccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEEecc-ccccccchhhhHHHHHHhhhhcccCC
Confidence             322  111 1110        01234788999999997443  344443321 111        111222111 12344


Q ss_pred             cchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc-------------------------------
Q 015890          266 ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG-------------------------------  313 (398)
Q Consensus       266 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-------------------------------  313 (398)
                      ++....+.+..+... .....++..++..++.+++++.+.+.+......                               
T Consensus       290 p~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (462)
T d1c4ka2         290 PFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGA  369 (462)
T ss_dssp             CCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTC
T ss_pred             chHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcc
Confidence            444444444444432 123345555666666667776665543311000                               


Q ss_pred             --------CCccEE-----EEeeCCC----------CCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHH
Q 015890          314 --------GEGAIY-----LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       314 --------~~~~~~-----~~~~~~~----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~  369 (398)
                              ......     +.+..+.          ......++.+.| +++||.+...    ..+.||++++. .|+++
T Consensus       370 ~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L-~~~gI~~e~~----~~~~i~~~~s~~~T~ed  444 (462)
T d1c4ka2         370 KWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKS----DLNSILFLMTPAETPAK  444 (462)
T ss_dssp             TTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEE----CSSEEEEECCTTCCHHH
T ss_pred             hhccccccCccceecccceeEEecCCccccccchhhcCCcHHHHHHHH-HHcCCeeecc----CCCeEEEEecCCCCHHH
Confidence                    000000     1222211          112455666655 6899966432    46789999988 89999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 015890          370 CKAAADRLRRGLEELVK  386 (398)
Q Consensus       370 ~~~~~~~l~~~~~~~~~  386 (398)
                      +++++++|.+..+.+.+
T Consensus       445 id~li~aL~ei~r~~~~  461 (462)
T d1c4ka2         445 MNNLITQLLQLQRLIEE  461 (462)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999998877654

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=6.9e-17  Score=152.22  Aligned_cols=310  Identities=13%  Similarity=0.050  Sum_probs=185.3

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhcCCCCCcEEEecChHHHHHHHHHHhccCCCEEE---------EeCCCCcChhhHHHh
Q 015890           62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV---------MFAPYYFNSYMSFQM  132 (398)
Q Consensus        62 ~~y~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~Vl---------~~~p~~~~~~~~~~~  132 (398)
                      ..|+.++...+|++++++++    |  .+.++++++|++|+..++.+++++|+.++         .....|......+..
T Consensus        68 ~~Y~~~~~~~~le~~~a~l~----G--~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~  141 (467)
T d2v1pa1          68 EAFSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQI  141 (467)
T ss_dssp             CCSSSCHHHHHHHHHHHHHT----C--CSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHH
T ss_pred             hhhcCCchHHHHHHHHHHHH----C--CCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHHH
Confidence            35776777777888877776    4  45688999999999999999987665433         333333334455677


Q ss_pred             cCcEEEEeccCCCC---------CCCCChHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEE
Q 015890          133 TGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWL  200 (398)
Q Consensus       133 ~g~~~~~~~~~~~~---------~~~~d~e~l~~~l~~~--~~~~~v~i~~p~npt-G~~~~~~~l~~i~~l~~~~~~~l  200 (398)
                      .|..+..+ +.+..         ...+|++.+++.++..  ..++++++.+.+|.. |.+++.+++++|.++|++||+++
T Consensus       142 ~G~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l  220 (467)
T d2v1pa1         142 NGCTVRNV-YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPV  220 (467)
T ss_dssp             TTCEEEEC-BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred             cCCeeeec-ccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEE
Confidence            88888877 44321         2357899999998732  224677787776654 56789999999999999999999


Q ss_pred             EEeece-ec-----------cCCCcccc----ccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH---HHhh--
Q 015890          201 VVDNTY-FM-----------YDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---LKVQ--  259 (398)
Q Consensus       201 ivDe~~-~~-----------~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l---~~~~--  259 (398)
                      |+|+++ +.           +.+.....    ......++..|.+|.++  +...|++..++  ..+....   ....  
T Consensus       221 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~--~~~gg~i~~~~--~~~~~~~~~~~~~~~~  296 (467)
T d2v1pa1         221 VMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAM--VPMGGLLCMKD--DSFFDVYTECRTLCVV  296 (467)
T ss_dssp             EEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTC--CSSCEEEEECS--GGGHHHHHHHHHHHHH
T ss_pred             EEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCC--CCCceeEEecc--hhhhhHHHhhcccccc
Confidence            999998 21           11111100    00123466778889876  33456777664  2222222   1111  


Q ss_pred             -c--cCCCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccCCCCccccCCc-cEEEEee--CCCC---CCC
Q 015890          260 -D--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG-AIYLWAR--LPEK---HLD  330 (398)
Q Consensus       260 -~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~--~~~~---~~~  330 (398)
                       .  ....+.+.....+....+....  ..+..++..++.+++.+.|++.+. .+.++.. ..+....  ++..   ...
T Consensus       297 ~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  373 (467)
T d2v1pa1         297 QEGFPTYGGLEGGAMERLAVGLYDGM--NLDWLAYRIAQVQYLVDGLEEIGV-VCQQAGGHAAFVDAGKLLPHIPADQFP  373 (467)
T ss_dssp             TTSSCCCCCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHTTC-CEEEECSSCEEEEHHHHSTTSCGGGCH
T ss_pred             cccCcchhhhHHHHHHHHHHHhHHhh--hHHHHHHHHHHHHHHHHHHHhcCC-cccCCCccceeecchhhcCCcchhhhh
Confidence             1  1112233344444444343211  123334445566777777776655 3332221 2222111  1111   112


Q ss_pred             hHHHHHHHHHhcCeEEecCCCC-------------CCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHh
Q 015890          331 DFEVVRWLAHRHGVVVIPGGAC-------------GCRGHLRISFGG--LVEDDCKAAADRLRRGLEELV  385 (398)
Q Consensus       331 ~~~~~~~ll~~~gi~v~~g~~~-------------~~~~~iRi~~~~--~~~~~~~~~~~~l~~~~~~~~  385 (398)
                      .......++.+.||.......+             .....+|+++..  .|+++++.+++.|++++++..
T Consensus       374 ~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~~~  443 (467)
T d2v1pa1         374 AQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA  443 (467)
T ss_dssp             HHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             hHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3445566777889865422211             124679999764  589999999999999987543

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=9.3e-17  Score=146.06  Aligned_cols=333  Identities=10%  Similarity=-0.049  Sum_probs=188.9

Q ss_pred             eEEcCCccCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHHH
Q 015890           32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVN  104 (398)
Q Consensus        32 ~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~~  104 (398)
                      +.||+-|  |...|++|+++|.+.+.+....+.      +.++...++.+.+.+.++++++.+.+ .|++++|++++...
T Consensus         2 ~~nF~pG--P~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~   79 (360)
T d1bjna_           2 IFNFSSG--PAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFA   79 (360)
T ss_dssp             CEECCSS--SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eEEeCCC--CcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHh
Confidence            4567655  666899999999998865321111      12333455666777777777787644 67887777666655


Q ss_pred             HHH-HhccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015890          105 IVL-TLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI  181 (398)
Q Consensus       105 ~~~-~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~~  181 (398)
                      +.. .+..+++.+++....+.+  +...++..|...+.. ..+.. ..++.+.+++.+..++  +++++.+.+|.||...
T Consensus        80 a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~--~~v~v~~~~~~t~~~~  155 (360)
T d1bjna_          80 AVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFD-AKVTV-DGLRAVKPMREWQLSD--NAAYMHYCPNETIDGI  155 (360)
T ss_dssp             HHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEE-CEEEE-TTEEEECCGGGCCCCS--SCSCEEECSEETTTTE
T ss_pred             hhhhcccccccccceecccchhhhhHHHHhhcCccceee-ccccC-CCcchhhhhhhhccCC--ceeEEEecccccccCc
Confidence            554 455677788777666644  445566667666655 33322 2345666677776665  6666666788888887


Q ss_pred             CHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCc--------HHHH
Q 015890          182 PERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFA  252 (398)
Q Consensus       182 ~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~--------~~~~  252 (398)
                      +   +..+.  ++.+++.+++|.+. +....  ......  ++++.|.+|.+++|+...+++......        ....
T Consensus       156 ~---~~~i~--~~~~~~~v~vDa~~~~~~~~--vd~~~~--dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (360)
T d1bjna_         156 A---IDETP--DFGADVVVAADFSSTILSRP--IDVSRY--GVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDY  226 (360)
T ss_dssp             E---CCCCC--CCCTTCCEEEECTTTTTSSC--CCGGGC--SEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCH
T ss_pred             c---cccee--cccccceeeeeeecccccee--eeeccc--eeEEEEcccccccCCCceeEeeehhhhhccccCCcchhh
Confidence            6   33333  46678999999877 44322  222223  367778889987655433343333210        0000


Q ss_pred             HHHHHhhccCCCCcchHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhccCCCCcccc---CCccEEEEeeCCCCC
Q 015890          253 TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG---GEGAIYLWARLPEKH  328 (398)
Q Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~  328 (398)
                      ............+.+.....+....+.. .........++..+....+...+...+......   ......+.+.++++ 
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~-  305 (360)
T d1bjna_         227 SILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADS-  305 (360)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSG-
T ss_pred             HHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcCCc-
Confidence            1111111122222222222222222221 112333444444444444444444433311111   11123345566643 


Q ss_pred             CChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          329 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       329 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .+..++...| +++||.++.|...  -+.||+|+.. .+++|++++++.|++..++
T Consensus       306 ~~~~~~~~~l-~~~Gi~~~~G~~~--~g~~Ris~~~~~t~edV~~li~~l~e~~~~  358 (360)
T d1bjna_         306 ALDKLFLEES-FAAGLHALKGHRV--VGGMRASIYNAMPLEGVKALTDFMVEFERR  358 (360)
T ss_dssp             GGHHHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHH-HHCCCEeecCCCc--cCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence            2456666655 6899999887432  2469999877 8999999999999987654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.68  E-value=8.2e-16  Score=139.84  Aligned_cols=328  Identities=13%  Similarity=0.064  Sum_probs=178.9

Q ss_pred             CeEEcCCccCCCCCcHHHHHHHHHhhcCCCCCC---C---CCCCCcHHHHHHHHHHHhhhcCCCCC-cEEEecChHHHHH
Q 015890           31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK---Y---GADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFV  103 (398)
Q Consensus        31 ~~~~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~---y---~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~g~t~a~~  103 (398)
                      .+.+|+.|  |.+.|++|+++|.+.+.+....+   +   +.++...++.+..++.++++++++.+ .|++++|+++++.
T Consensus         3 ~~~nF~pG--P~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~   80 (360)
T d1w23a_           3 QVFNFNAG--PSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF   80 (360)
T ss_dssp             CCEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceeEeCCC--CcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            45677776  66678999999999875521100   0   02223455556666667777788655 5788888877776


Q ss_pred             HHHHHh-ccCCCEEEEeCCCCcC--hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015890          104 NIVLTL-CDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY  180 (398)
Q Consensus       104 ~~~~~l-~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~v~i~~p~nptG~~  180 (398)
                      .+.... ..+++.+++...++++  +...++..+...+.. ..... ....++.++......   +.+.+   .|.||..
T Consensus        81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~~---~~~tg~~  152 (360)
T d1w23a_          81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAA-STKAN-SYQSIPDFSEFQLNE---NDAYL---HITSNNT  152 (360)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEE-ECGGG-TSCSCCCGGGCCCCT---TEEEE---EEESEET
T ss_pred             HHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceee-ccccc-cccchhhhhhccccc---cccee---EecCCcc
Confidence            555554 5667888887766644  445556666655554 22211 122444555544433   33333   4568999


Q ss_pred             CCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCCCcceeEEEEccCCcHHHHHHH----
Q 015890          181 IPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL----  255 (398)
Q Consensus       181 ~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~l----  255 (398)
                      .|   +.+|.++|+++|+++|+|.++ ++.....  ....+.++.  +++|.++++|. .|+++..   +...+..    
T Consensus       153 ~~---~~~i~~~~~~~g~l~ivDavqs~g~~~id--~~~~~vd~~--~~~~~k~~~~~-~~~~~~~---~~~~~~~~~~~  221 (360)
T d1w23a_         153 IY---GTQYQNFPEINHAPLIADMSSDILSRPLK--VNQFGMIYA--GAQKNLGPSGV-TVVIVKK---DLLNTKVEQVP  221 (360)
T ss_dssp             TT---TEECSSCCCCCSSCEEEECTTTTTSSCCC--GGGCSEEEE--ETTTTTSCTTC-EEEEEEH---HHHCSCCTTCC
T ss_pred             cc---ceeeeeccccceeeEEeeccccccccccc--cccccceEE--eeccccccCCc-ceeeEec---hhhhcccccCC
Confidence            99   888999999999999999999 6653333  333454454  44555543342 3444333   1111000    


Q ss_pred             -------HHhhccCCCCcchHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHhccCCCCccc----cCCccEEEEe
Q 015890          256 -------LKVQDNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK----GGEGAIYLWA  322 (398)
Q Consensus       256 -------~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~~~~~~  322 (398)
                             .........+.+.....+....+..  .........++.....................    .......+.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf  301 (360)
T d1w23a_         222 TMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTF  301 (360)
T ss_dssp             GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEE
T ss_pred             cchhhhhhhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEE
Confidence                   0011111222222222222222211  01112222233333333333333222221111    1111224556


Q ss_pred             eCCCCCCChHHHHHHHHHhcCeEEecCCCCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Q 015890          323 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE  383 (398)
Q Consensus       323 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~~~~  383 (398)
                      .++.. ....++...| .++||.++.|..+.  +.||+|+.. .+.|+++++++.|++..+.
T Consensus       302 ~i~~~-~~~~~~~~~l-~~~GI~~~~G~~~~--ggiRiS~~~~~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         302 NLRNE-ELNQQFLAKA-KEQGFVGLNGHRSV--GGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             ECSSH-HHHHHHHHHH-HHTTEESCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EcCCC-ccHHHHHHHH-HHCCCeeeeCCCcc--CcEEEEeeCCCCHHHHHHHHHHHHHHHhc
Confidence            66543 2345666655 68999998886442  469999765 6899999999998887654

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=1.5e-12  Score=118.64  Aligned_cols=344  Identities=16%  Similarity=0.098  Sum_probs=211.0

Q ss_pred             chHHHHHHHHHHcCCCe-EEc-CCccCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890           16 MPIMVQIQELVRGAKNA-VSL-AQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSS   91 (398)
Q Consensus        16 ~~~~~~~~~~~~~g~~~-~~l-~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~~~~~~~~~l~~~l~~~~~~~~~~   91 (398)
                      ....+.+.+....+... ..| ..|.-....|+.+.+.+.+.-.-...+.|+|  ++|.-++.-.+..++.+..|.+.-+
T Consensus        48 ~e~~r~~~~ls~kN~~~~~~fig~G~~~~~~p~~i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n  127 (437)
T d1wyua1          48 WKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIAN  127 (437)
T ss_dssp             HHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEEC
T ss_pred             HHHHHHHHHHHhCCCCcCccccCcccCCceeCHHHHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHHHHhhCCCccc
Confidence            34455566555432221 122 2344444567766443322111111345554  4677777778888899999988777


Q ss_pred             EEEecChHHHHHHHHHHhc-cCCCEEEEeCCCCcChhh----HHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCCCe
Q 015890           92 VMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK  166 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l~-~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~  166 (398)
                      .-.-.|++.....++.+.. ...++++++...|+....    .++..|++++.+ +.++.+.  +.++    ++++  ++
T Consensus       128 ~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v-~~~~~~~--~~~~----~~~~--~A  198 (437)
T d1wyua1         128 ASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL-PLEGGRT--PLPE----VGEE--VG  198 (437)
T ss_dssp             SCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE-CCBTTBC--CCCC----CCTT--EE
T ss_pred             cCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEee-ecccccc--hhhh----hccc--ee
Confidence            7777888777777666553 345789999988866553    356789999998 7654432  2222    3444  59


Q ss_pred             EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeeceeccCCCccccccCCcEEEEcccccccCC----CcceeEEE
Q 015890          167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYI  242 (398)
Q Consensus       167 ~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~i  242 (398)
                      +|++++||+ .|.+-+   ++++++++++.|.++++|..-....+...... .+.++++++ +|.||.    +|...|++
T Consensus       199 avmi~~Pnt-~G~~ed---~~~i~~~~h~~G~l~~~~ad~~al~~l~~Pg~-~GaDi~~g~-~q~fg~p~g~GGP~~G~~  272 (437)
T d1wyua1         199 AVVVQNPNF-LGALED---LGPFAEAAHGAGALFVAVADPLSLGVLKPPGA-YGADIAVGD-GQSLGLPMGFGGPHFGFL  272 (437)
T ss_dssp             EEEEESSCT-TSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBCCHHH-HTCSEEEEE-CTTTTCCCGGGCSCCEEE
T ss_pred             EEEEccccc-cccccc---hHHHHHHhhhccceEEeeechhhhhccccccc-cccceEeec-cceeccccCCCcCccccc
Confidence            999999965 788865   89999999999998777643333333322221 233466666 555432    34456888


Q ss_pred             EccCCcHHHHHHH----------------------------HHhhccCCCCcchHH--HHHHHHHhcCCchHHHHHHHHH
Q 015890          243 AYPSEVEGFATQL----------------------------LKVQDNIPICASIIS--QHLALYSLQTGPEWVTERVKDL  292 (398)
Q Consensus       243 ~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~  292 (398)
                      .+++   ++...+                            ++.+.....+.+...  ..+..++...+.+.+++..+..
T Consensus       273 a~~~---~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a  349 (437)
T d1wyua1         273 ATKK---AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKS  349 (437)
T ss_dssp             EECG---GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---hhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCcccHHHHHHHH
Confidence            7773   333222                            222222222333222  2333333333567789999999


Q ss_pred             HHHHHHHHHHhccCCCCccccCCc-cEEEEeeCCCCCCChHHHHHHHHHhcCeEEecC-CCCCCCCeEEEEecC-CCHHH
Q 015890          293 VRNREIIREALSPLGEGAVKGGEG-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG-GACGCRGHLRISFGG-LVEDD  369 (398)
Q Consensus       293 ~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g-~~~~~~~~iRi~~~~-~~~~~  369 (398)
                      ..+++++.+.|.+++++.+..+.. -.=+.++++.   +..++.++|+ ++|+....- ..+..++.+.|+++- .+.++
T Consensus       350 ~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~~---~~~~i~k~L~-d~G~~~~~~~~~~~~~~~lli~~TE~~tkee  425 (437)
T d1wyua1         350 VEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPK---DPEAVRRALA-ERGFHGATPVPREYGENLALFAATELHEEED  425 (437)
T ss_dssp             HHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSS---CHHHHHHHHH-HTTCCCCEECCTTSCSSEEEEECCTTCCHHH
T ss_pred             HHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECCC---CHHHHHHHHH-hCCCCCCcccccCCCCCeEEEecCCCCCHHH
Confidence            999999999999887756543321 1224455543   5778888886 889854211 112246789999987 78899


Q ss_pred             HHHHHHHHHHHH
Q 015890          370 CKAAADRLRRGL  381 (398)
Q Consensus       370 ~~~~~~~l~~~~  381 (398)
                      +++++++|++++
T Consensus       426 iD~~v~al~eil  437 (437)
T d1wyua1         426 LLALREALKEVL  437 (437)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999988763

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=1.4e-12  Score=120.29  Aligned_cols=352  Identities=18%  Similarity=0.144  Sum_probs=214.1

Q ss_pred             hHHHHHHHHHHcCCCe-EEcC-CccCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHhhhcCCCCCc
Q 015890           17 PIMVQIQELVRGAKNA-VSLA-QGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSS   91 (398)
Q Consensus        17 ~~~~~~~~~~~~g~~~-~~l~-~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~~~~~~~~~l~~~l~~~~~~~~~~   91 (398)
                      +..+.+.+....+... ..|. .|.-..--+|.+.+.+.+.+..  .+.|+|   ++|.-+..-.+...+.+++|.+.-|
T Consensus        48 El~r~~~~la~kN~~~~~~~~~lG~~~~hy~P~v~~~~~~~~Ta--YTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaN  125 (471)
T d1wyub1          48 TLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDAIT  125 (471)
T ss_dssp             HHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHhCCCCccccccCCccccCccCcchhhhHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            4555666665543321 1121 2321212356777777664433  567776   5666666667777788888988767


Q ss_pred             EEEecChHHHHHHHHHHhc---cCC----CEEEEeCCCCcC-hhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCC
Q 015890           92 VMVTAGANQAFVNIVLTLC---DAG----DSVVMFAPYYFN-SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP  163 (398)
Q Consensus        92 v~~~~g~t~a~~~~~~~l~---~~g----d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~  163 (398)
                      .-+..|+|.+-..++.+..   +.+    ..+.+..+.+.. ........+..++.+ +.+.. ...+.+.++.....+.
T Consensus       126 aS~yDGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~  203 (471)
T d1wyub1         126 LEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREI-PSGPE-GEVDLEALKRELGPHV  203 (471)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTT-SSBCHHHHHHHCSTTE
T ss_pred             cccchHHHHHHHHHHHHHHHhhhcccccccccccCCcccccceeeeeecccceeecc-ccccc-ccccchhhhhhhhccc
Confidence            7777888777666655542   222    244555555544 344445566777777 65544 3568888888877654


Q ss_pred             CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEeece-eccCCCccccccCCcEEEEcccccccCC----Ccce
Q 015890          164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWR  238 (398)
Q Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r  238 (398)
                        .++++.+|++..+..-.   .+.+.+++++.+..+++|.+. ....+.......+.. +++...++.||.    +|..
T Consensus       204 --a~v~v~~p~~~g~~e~~---~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~~~g~d-iv~vg~~q~~G~P~~~GGP~  277 (471)
T d1wyub1         204 --AALMLTNPNTLGLFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFD-VVHLNLHKTFTVPHGGGGPG  277 (471)
T ss_dssp             --EEEEECSSCTTSCCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCS-EEECCTTTTTCCCCTTSCCC
T ss_pred             --cceeeccCCCcccccch---hhhhHHHHHhccccccccccchhhhhhccccCccccc-cccccccccccccccccccc
Confidence              88999988876554444   788899999999999988665 222222222222223 334455555543    4556


Q ss_pred             eEEEEccCCcHHHHHHHHH-------------------hhccCCCCcc-hHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 015890          239 VGYIAYPSEVEGFATQLLK-------------------VQDNIPICAS-IISQHLALYSLQTGPEWVTERVKDLVRNREI  298 (398)
Q Consensus       239 ~G~i~~~~~~~~~~~~l~~-------------------~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (398)
                      +|++.+.   ++++..+-.                   ++.....+.+ ..+..++.++.-.+.+.+++..+....++.+
T Consensus       278 ~G~~a~~---~~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Y  354 (471)
T d1wyub1         278 SGPVGVK---AHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARY  354 (471)
T ss_dssp             CCCEEEC---GGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeh---hhhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence            7888888   455443310                   0111111222 3333333333333667889999999999999


Q ss_pred             HHHHhccCCCCccccC-CccEEEEeeCCCCCCChHHHHHHHHHhcCeEEecCCCCC--CCCeEEEEecC-CCHHHHHHHH
Q 015890          299 IREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDCKAAA  374 (398)
Q Consensus       299 l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~  374 (398)
                      +.+.|+..|. ++..+ ..-+-+.++++++. +..++.++|+ ++|+.- +...|.  .++.+-|+++- .+.+|+++++
T Consensus       355 la~~L~~~G~-~~~~~~~ff~EFvv~~~~~~-~~~~i~k~L~-~~G~~~-~~~~~p~~~~~~llv~vTE~~tkedID~lv  430 (471)
T d1wyub1         355 LKELLKEKGY-RVPYDGPSMHEFVAQPPEGF-RALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFA  430 (471)
T ss_dssp             HHHHHHHTTC-BCSSCSSCCSCEEEBCSTTC-CHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHH
T ss_pred             HHHHHhhcCc-eeccCcceeeEEeecCCCCC-CHHHHHHHHH-HcCCCC-CcccCcCCCCCeEEEecCCCCCHHHHHHHH
Confidence            9999977554 44322 21223556666543 5678888887 788854 222232  35788899887 7899999999


Q ss_pred             HHHHHHHHHHh
Q 015890          375 DRLRRGLEELV  385 (398)
Q Consensus       375 ~~l~~~~~~~~  385 (398)
                      ++|++++++..
T Consensus       431 ~aL~~i~~e~~  441 (471)
T d1wyub1         431 EAMGALLKKPK  441 (471)
T ss_dssp             HHHHHHHTSCH
T ss_pred             HHHHHHHHhhH
Confidence            99999887654

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.78  E-value=3.6  Score=28.51  Aligned_cols=102  Identities=9%  Similarity=0.034  Sum_probs=65.0

Q ss_pred             cEEEecChHHHHHHHHHHhc---cCC--CEEEEeCCCCcChhhHHHhcCc---EEEEeccCCCCCCCCChHHHHHhhccC
Q 015890           91 SVMVTAGANQAFVNIVLTLC---DAG--DSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK  162 (398)
Q Consensus        91 ~v~~~~g~t~a~~~~~~~l~---~~g--d~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~l~~~  162 (398)
                      ++.....+.+.+..++..+.   ...  .-|+...|.+..+...+...|+   ++..+ .....  .-.+..+|+.++.+
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v-~~~~~--~d~lwa~EqaL~sg   82 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLL-QAKDN--AAALALSCEALRLG   82 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEE-CCSSH--HHHHHHHHHHHHHT
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEE-eCCCh--HHHHHHHHHHHhcC
Confidence            35555666566666666553   232  3477788888899999999997   55555 22111  11356678888876


Q ss_pred             CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015890          163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV  202 (398)
Q Consensus       163 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~liv  202 (398)
                      + +.+|+.- +.     .++.+.++++--.|++.+...++
T Consensus        83 ~-~~aVl~w-~~-----~l~~~~~RRLqlAA~~g~t~~~l  115 (119)
T d1ofux_          83 R-SHTVVSW-LE-----PLSRAARKQLSRAAQLGQAQSLN  115 (119)
T ss_dssp             C-EEEEEEC-CS-----SCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             C-ccEEEEc-CC-----CCChHHHHHHHHHHHhcCCEEEE
Confidence            6 4555543 32     25677788888888888776553

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=81.43  E-value=4.2  Score=29.79  Aligned_cols=101  Identities=17%  Similarity=0.179  Sum_probs=60.3

Q ss_pred             CCCCCcEEEecChHHHHHHHHHHhccCC-CEEEEeCCCCcChhhHHHhcCcEEEEeccCCCCCCCCChHHHHHhhccCCC
Q 015890           86 KLYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT  164 (398)
Q Consensus        86 ~~~~~~v~~~~g~t~a~~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~l~~~~~  164 (398)
                      +.+...|++...|..+ ..++..|...| ..|.+...+.......++.+|.+..            +++++.+.+.+-  
T Consensus        21 ~l~~~~ilviGaG~~g-~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~------------~~~~~~~~l~~~--   85 (159)
T d1gpja2          21 SLHDKTVLVVGAGEMG-KTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV------------RFDELVDHLARS--   85 (159)
T ss_dssp             CCTTCEEEEESCCHHH-HHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC------------CGGGHHHHHHTC--
T ss_pred             CcccCeEEEECCCHHH-HHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc------------cchhHHHHhccC--
Confidence            3455555555444333 46677776666 5788888887666667777775543            345667777643  


Q ss_pred             CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEee
Q 015890          165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN  204 (398)
Q Consensus       165 ~~~v~i~~p~nptG~~~~~~~l~~i~~l~~~~~~~livDe  204 (398)
                       .+|+.+.+ .|. .+++.+.++...+.-+...-.+|+|-
T Consensus        86 -Divi~ats-s~~-~ii~~~~i~~~~~~r~~~~~~~iiDl  122 (159)
T d1gpja2          86 -DVVVSATA-APH-PVIHVDDVREALRKRDRRSPILIIDI  122 (159)
T ss_dssp             -SEEEECCS-SSS-CCBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred             -CEEEEecC-CCC-ccccHhhhHHHHHhcccCCCeEEEee
Confidence             56665532 122 34677777766553222345789994