Citrus Sinensis ID: 015936

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MATLLSFLSSLPLCHSPPPQRRRFPPSPSNFSPLRFTAQEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA
Secondary Structure (PSIPRED)
cccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHHHcccccccEEEEEEEcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccHHHcHHHHHHHHcccHHccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHccccccccccccccccccccccHHHEccccccccccEcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
MATLLSFlsslplchspppqrrrfppspsnfsplrftaqeprksrslavssssssssspfddfcsklnsplpdsstKKSVLASMIQevepldvtliqkdvppttlDAMKRTISSMlgllpsdrFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERnldvhegdgenqtsecsqtdLHGMLLnrenidefsgknelsseFQQNvddlnedigveglgemtPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSlqpekvvelseptcpelKETIHSVVHGLLAtlspkmhskvpplentatgMVNIWSKDCAELVentslhfqpqisLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLtsdaendvhgneqva
Flexible Loop (DISEMBL)
MATLLSFLSSLPLCHSPPPQRRRFPPSPSNFSPLRFTAQEPRKSRSLAvssssssssspFDDFCSKLNSPLPDSSTKKSVLASMIQevepldvtliqkdvPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHegdgenqtsecsqTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSltsdaendvhgneqva
Low Complexity Region (SEG)
MATllsflsslplchspppqrrrfppspsnfsplrfTAQEPRKSRSLAVsssssssssPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA
Disordered region (IsUnstruct)
************************************************************************************IQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDV**************************************************IGVEGLGEMTPEVQQYILNLQSRLSSIKKELCE************FV****NDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSP*******PLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSL***************
Disordered Region (DISOPRED)
********************************************************************************LASMIQEVEPLDVT*I*****PTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLE*****************************************************************PEVQQYILNLQS****************************KNDLLDYLRSLQ**************LKETIHSVVHGLLATLS*******************************TSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELM********************
Disordered Region (DISEMBL)
MATLLSFLSSLPLCHSPPPQRRRFPPSPSNFSPLRFTA************************FCSKLNSP**********LASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVH***********SQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA
Disordered Region (DISPRO)
**T*LSFLSSLPLCHSPPPQRRRFPPSPSNFSPL*F****************************************KKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDV******************GMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSP*********************KDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSL***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLLSFLSSLPLCHSPPPQRRRFPPSPSNFSPLRFTAQEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
255555211	402	conserved hypothetical protein [Ricinus	0.894	0.885	0.730	1e-143
225429321	388	PREDICTED: uncharacterized protein LOC10	0.962	0.987	0.657	1e-140
224103699	394	predicted protein [Populus trichocarpa]	0.924	0.934	0.683	1e-134
224056212	322	predicted protein [Populus trichocarpa]	0.798	0.987	0.749	1e-132
449438347	390	PREDICTED: uncharacterized protein LOC10	0.962	0.982	0.642	1e-125
6648962	404	seed maturation protein PM23 [Glycine ma	0.891	0.878	0.627	1e-121
356534301	404	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.891	0.878	0.627	1e-121
15226027	386	uncharacterized protein [Arabidopsis tha	0.939	0.968	0.625	1e-119
359807127	379	uncharacterized protein LOC100812190 [Gl	0.924	0.970	0.601	1e-118
297836128	382	hypothetical protein ARALYDRAFT_480378 [	0.896	0.934	0.634	1e-117

>gi|255555211|ref|XP_002518642.1| conserved hypothetical protein [Ricinus communis] gi|223542023|gb|EEF43567.1| conserved hypothetical protein [Ricinus communis]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/364 (73%), Positives = 301/364 (82%), Gaps = 8/364 (2%)

Query: 36  FTAQEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTL 95
            T++ PRK+    + + S SSS   DDF S  NS    SS KKSVL+ +IQE+EPLDV+L
Sbjct: 46  ITSKNPRKTIPTLILACSDSSSF-CDDFFSNPNS---GSSDKKSVLSDLIQEIEPLDVSL 101

Query: 96  IQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYR 155
           IQKDVPPTTLDAMKRTIS MLGLLPSDRF VFIEA WEPL KLLVSSMMTGYTLRNAEYR
Sbjct: 102 IQKDVPPTTLDAMKRTISGMLGLLPSDRFKVFIEAFWEPLFKLLVSSMMTGYTLRNAEYR 161

Query: 156 LCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDI 215
           LCLERNL VHEGD +NQ SE  + DL G  ++    ++ +GKN    +F++  +D +++I
Sbjct: 162 LCLERNLGVHEGDIDNQVSENPKLDLQGTEVDNAKTNQCNGKN---VKFERITEDPSDNI 218

Query: 216 GVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSL 275
           G+EGLG+M+PE QQ+IL+LQSRLSS+KKELCEVKRKS ALQMQQFVGEEKNDLLDYLRSL
Sbjct: 219 GIEGLGDMSPEAQQFILHLQSRLSSVKKELCEVKRKSDALQMQQFVGEEKNDLLDYLRSL 278

Query: 276 QPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPL-ENTATGMVNIWSKDCAE 334
           QPEKV ELSEPT PELKE IHSVVHGLLATLSPKMHSK PP  ENT++G  NI ++DCAE
Sbjct: 279 QPEKVAELSEPTSPELKEVIHSVVHGLLATLSPKMHSKAPPQPENTSSGTRNIGNEDCAE 338

Query: 335 LVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGN 394
           LVENTSL FQP ISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTS+ E D  G+
Sbjct: 339 LVENTSLQFQPLISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSNVEIDGCGD 398

Query: 395 EQVA 398
           EQVA
Sbjct: 399 EQVA 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429321|ref|XP_002271502.1| PREDICTED: uncharacterized protein LOC100267925 [Vitis vinifera] gi|296083095|emb|CBI22499.3| unnamed protein product [Vitis vinifera]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/403 (65%), Positives = 323/403 (80%), Gaps = 20/403 (4%)

Query: 1   MATL--LSFLSSLPLCHSPPPQRR---RFPPSPSNFSPLRFTAQEPRKSRSLAVSSSSSS 55
           MAT+  L F S L    SPPP  R   +     ++FSP     + PRK ++L +  +SSS
Sbjct: 1   MATIASLRFFSRL----SPPPSHRSRSQLSFDLTHFSP----TKNPRKFQTLTLVRASSS 52

Query: 56  SSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSM 115
           S        S       +S +KKSVL+++IQE+EPLDV+LIQKDV PTT+DAMKRTIS M
Sbjct: 53  SFDDLSSERS------ANSRSKKSVLSNLIQEIEPLDVSLIQKDVLPTTVDAMKRTISGM 106

Query: 116 LGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSE 175
           LGLLPSD+FHV IEALW PLSKLLVSSMMTGYTLRNAEYRLCLERNLD++EG+ E Q  E
Sbjct: 107 LGLLPSDQFHVVIEALWLPLSKLLVSSMMTGYTLRNAEYRLCLERNLDIYEGNTEKQRPE 166

Query: 176 CSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQ 235
            S++D   +LL+  ++++ SGK+ELSS+ ++N ++ +E +G++GLGEMT E QQYIL+LQ
Sbjct: 167 ISKSDELEILLDSADVNK-SGKHELSSKSEENTENPSEGLGIQGLGEMTAEAQQYILHLQ 225

Query: 236 SRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETI 295
           ++LSS+KKELCEVKRK++ALQMQQFVGEE+NDLLDYLRSLQPEKV ELSEP  PELKE I
Sbjct: 226 TQLSSVKKELCEVKRKNAALQMQQFVGEEQNDLLDYLRSLQPEKVAELSEPATPELKEII 285

Query: 296 HSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLA 355
           HS VHGLLATLSPKMHSK P  ENT+TG++N+ ++DC ELVENTS+ FQP ISLTRDYLA
Sbjct: 286 HSAVHGLLATLSPKMHSKAPLSENTSTGVLNVGNEDCTELVENTSVQFQPLISLTRDYLA 345

Query: 356 RLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA 398
           RLLFWCMLLGHYLRGLEYR+EL+ELLSL+SDAEN+  G+EQVA
Sbjct: 346 RLLFWCMLLGHYLRGLEYRVELIELLSLSSDAENEASGDEQVA 388

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103699|ref|XP_002313160.1| predicted protein [Populus trichocarpa] gi|222849568|gb|EEE87115.1| predicted protein [Populus trichocarpa]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/385 (68%), Positives = 302/385 (78%), Gaps = 17/385 (4%)

Query: 16  SPPPQRRRFPPSPSNFSPLRFTA-QEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDS 74
           +PP     FP S     PLR T     RK +++ ++S +S SS  FD F  + N    +S
Sbjct: 25  TPPSFSLSFPFS----HPLRATVTANSRKIKTVILASPASDSS--FDGF--EFNR---ES 73

Query: 75  STKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEP 134
           + KKSVL+ +IQE+EPLDV+LIQKDV PTTLDAMKRTIS MLGLLPSDRF VFIEA WE 
Sbjct: 74  ADKKSVLSDLIQEIEPLDVSLIQKDVSPTTLDAMKRTISGMLGLLPSDRFQVFIEAWWES 133

Query: 135 LSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEF 194
           LSKLLVSSMMTGYTLRNAEYRLCLERNLD+HE D E Q  E  + +L    L  E  ++ 
Sbjct: 134 LSKLLVSSMMTGYTLRNAEYRLCLERNLDIHEKDPEKQAQENPRNELQRTALESEKTNQS 193

Query: 195 SGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSA 254
            GK+   +EF++ ++D + +I ++GLGE++PE QQYIL LQS LSS+ KEL +VKRKS+A
Sbjct: 194 FGKD---TEFEKTMEDPSNNIDLQGLGEISPEAQQYILRLQSCLSSVTKELHDVKRKSAA 250

Query: 255 LQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKV 314
           LQMQQFVGEEKNDLLDYLRSLQPEKV ELSEPT PELKETIHSVVHGLLATLSPKMHSK 
Sbjct: 251 LQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPTSPELKETIHSVVHGLLATLSPKMHSKT 310

Query: 315 PPL-ENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEY 373
           PP  +NT+TG +NI   DCAELVENTSLHFQP ISLTRDYLARLLFWCMLLGHYLRGLE+
Sbjct: 311 PPQSDNTSTGSLNI-GGDCAELVENTSLHFQPLISLTRDYLARLLFWCMLLGHYLRGLEH 369

Query: 374 RMELMELLSLTSDAENDVHGNEQVA 398
           RMELMELLSLTS  END   +EQVA
Sbjct: 370 RMELMELLSLTSHEENDHCEDEQVA 394

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056212|ref|XP_002298758.1| predicted protein [Populus trichocarpa] gi|222846016|gb|EEE83563.1| predicted protein [Populus trichocarpa]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/323 (74%), Positives = 273/323 (84%), Gaps = 5/323 (1%)

Query: 77  KKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLS 136
           +KS+L+ +IQE+EPLDV+LIQKDVPP TLDAMKRTIS MLGLLPSDRF VFIEA WE LS
Sbjct: 4   QKSLLSELIQEIEPLDVSLIQKDVPPATLDAMKRTISGMLGLLPSDRFQVFIEAWWESLS 63

Query: 137 KLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSG 196
           KLLVSSMMTGYTLRNAEYRLCLERNLD+HE D E Q    S+ +L G++L  E  ++  G
Sbjct: 64  KLLVSSMMTGYTLRNAEYRLCLERNLDIHEEDSEKQAQGNSKNNLQGLVLESEETNQSLG 123

Query: 197 KNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQ 256
           K+   +EF++  +DL++DI ++GLGE++ E QQYIL+LQS LSS+KKEL EV+ KS+ALQ
Sbjct: 124 KD---TEFEKIAEDLSDDINIQGLGEISLEAQQYILHLQSHLSSVKKELHEVRMKSAALQ 180

Query: 257 MQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPP 316
           M QFVGEEKNDLLDYLRSLQPEKV ELSEPT PELKETIHSVVHGLLATLSPKMHSK PP
Sbjct: 181 MHQFVGEEKNDLLDYLRSLQPEKVAELSEPTFPELKETIHSVVHGLLATLSPKMHSKTPP 240

Query: 317 L-ENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRM 375
             ENT+ G +NI   DCAELVENTSLHFQP ISLTRDYLARLLFWCMLLGHYLRGLEYRM
Sbjct: 241 QSENTSPGSLNI-GVDCAELVENTSLHFQPLISLTRDYLARLLFWCMLLGHYLRGLEYRM 299

Query: 376 ELMELLSLTSDAENDVHGNEQVA 398
           ELMELLSLTS  END   + QVA
Sbjct: 300 ELMELLSLTSHEENDSCEDRQVA 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438347|ref|XP_004136950.1| PREDICTED: uncharacterized protein LOC101218281 [Cucumis sativus] gi|449495675|ref|XP_004159911.1| PREDICTED: uncharacterized LOC101218281 [Cucumis sativus]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/403 (64%), Positives = 311/403 (77%), Gaps = 20/403 (4%)

Query: 1   MATLLSFLSSLPLCHSPPPQR--RRFP----PSPSNFSPLRFTAQEPRKSRSLAVSSSSS 54
           MA   S LS LPL   P  +   R FP    P  +NF+  RF+A        L +SSSS 
Sbjct: 1   MAAFTSSLS-LPLPFHPLSRSSTRHFPSPLLPPSTNFTS-RFSA--------LTISSSSL 50

Query: 55  SSSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISS 114
            S+S   D   + +SP    S+KKSVL+S+IQE+EPLDV+LIQKDVPPTT+DAMKRTIS 
Sbjct: 51  HSASDNFDHAKRSHSPF---SSKKSVLSSLIQEIEPLDVSLIQKDVPPTTVDAMKRTISG 107

Query: 115 MLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTS 174
           MLGLLPSD+F V +EALWEP+SKLLVSS+MTGYTLRNAEYRLCLERNLD  +G+  NQ +
Sbjct: 108 MLGLLPSDQFQVLVEALWEPVSKLLVSSIMTGYTLRNAEYRLCLERNLDFDDGNNYNQMN 167

Query: 175 ECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNL 234
           +  + DLH +LL+  N      +NE SS+ ++ +D+ +++I ++G+GE++PEVQQ+I +L
Sbjct: 168 DNCRIDLHEILLDGANSGNILDENESSSKCEELLDNSSDNINIQGIGEISPEVQQHIRHL 227

Query: 235 QSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKET 294
           Q +LSSIKKEL EVKRKS+ALQMQQFVGEEKNDLLDYLRSLQPEKV ELSEPT P+LKE 
Sbjct: 228 QFQLSSIKKELHEVKRKSAALQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPTSPDLKEA 287

Query: 295 IHSVVHGLLATLSPKMHSKVPPL-ENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDY 353
           IHSVVHGLLATLSPK+HSKVP   EN  T   NI ++DCAELVENTSL FQP ++LTRDY
Sbjct: 288 IHSVVHGLLATLSPKIHSKVPSQSENIGTSTTNIGNEDCAELVENTSLQFQPLLTLTRDY 347

Query: 354 LARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQ 396
           LARLLFWCMLLGHYLRGLEYRMELM LLSL+S+ EN   G +Q
Sbjct: 348 LARLLFWCMLLGHYLRGLEYRMELMNLLSLSSNVENAAGGGDQ 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6648962|gb|AAF21309.1| seed maturation protein PM23 [Glycine max]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/381 (62%), Positives = 285/381 (74%), Gaps = 26/381 (6%)

Query: 23  RFP-PSPSNFSP---LRFTAQEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDSSTKK 78
           R+P P+PS F P   L F+  +PR S  L +++SS        DF S         ++KK
Sbjct: 45  RYPNPNPSLFRPSLSLSFSRTKPR-SPFLVLAASSH-------DFAS---------NSKK 87

Query: 79  SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKL 138
           SVL  +IQE+EPLDV+ IQKDVPPTT DAMKRTIS MLGLLPSD+FHV IEALWEPLSKL
Sbjct: 88  SVLTELIQEIEPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWEPLSKL 147

Query: 139 LVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKN 198
           L+SSMMTGYTLRN EYRLCLE+NLD+ EGD E   +E  + DL G++ +  N  EF    
Sbjct: 148 LISSMMTGYTLRNVEYRLCLEKNLDMFEGDIEKPKAESMKVDLQGLMHDSVNAIEFGKNK 207

Query: 199 ELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQ 258
            LSS+    V+ L+E++ ++ LGE++ E QQYI NLQSRLSS+KKEL EVKRKS+ALQMQ
Sbjct: 208 NLSSK----VEKLHEEVDIQELGEISAEAQQYIFNLQSRLSSMKKELHEVKRKSAALQMQ 263

Query: 259 QFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPL- 317
           QFVGEEKNDLLDYLRSLQPE+V +LSE T PELK+TI SVVHGLLATLSPKMHSK   + 
Sbjct: 264 QFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDTILSVVHGLLATLSPKMHSKPSTMS 323

Query: 318 ENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMEL 377
           ENT  G  N  S+DCAE++EN++L FQP ISLTRDYLARLLFWCML    L GL    +L
Sbjct: 324 ENTTVGATNAGSEDCAEVLENSALQFQPVISLTRDYLARLLFWCMLWDTILEGLSVDWKL 383

Query: 378 MELLSLTSDAENDVHGNEQVA 398
            +LLSLTSDAENDV G++ +A
Sbjct: 384 TDLLSLTSDAENDVSGSQPIA 404

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534301|ref|XP_003535695.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC547534, partial [Glycine max]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/381 (62%), Positives = 283/381 (74%), Gaps = 26/381 (6%)

Query: 23  RFP-PSPSNFSP---LRFTAQEPRKSRSLAVSSSSSSSSSPFDDFCSKLNSPLPDSSTKK 78
           R+P P+PS F P   L F+  +PR S  L +++SS        DF S         ++KK
Sbjct: 45  RYPNPNPSLFRPSLSLSFSRTKPR-SPFLVLAASSH-------DFAS---------NSKK 87

Query: 79  SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKL 138
           SVL  +IQE+EPLDV+ IQKDVPPTT DAMKRTIS MLGLLPSD+FHV IEALWEPLSKL
Sbjct: 88  SVLTELIQEIEPLDVSHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWEPLSKL 147

Query: 139 LVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKN 198
           L+SSMMTGYTLRN EYRLCLE+NLD+ EGD E   +E  + DL G++ +  N  EF    
Sbjct: 148 LISSMMTGYTLRNVEYRLCLEKNLDMFEGDIEKPKAESMKVDLQGLMHDSVNAIEFGKNK 207

Query: 199 ELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQ 258
            LSS+    V+ L+E+  ++ LGE++ E QQYI NLQSRLSS+KKEL EVKRKS+ALQMQ
Sbjct: 208 NLSSK----VEKLHEEADIQELGEISAEAQQYIFNLQSRLSSMKKELHEVKRKSAALQMQ 263

Query: 259 QFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPL- 317
           QFVGEEKNDLLDYLRSLQPE+V +LSE T PELK+TI SVVHGLLATLSPKMHSK   + 
Sbjct: 264 QFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDTILSVVHGLLATLSPKMHSKPSTMS 323

Query: 318 ENTATGMVNIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMEL 377
           ENT  G  N  S+DCAE++EN++L FQP ISLTRDYLARLLFWCML    L GL     L
Sbjct: 324 ENTTVGATNAGSEDCAEVLENSALQFQPVISLTRDYLARLLFWCMLWDTILEGLSVDWXL 383

Query: 378 MELLSLTSDAENDVHGNEQVA 398
            +LLSLTSDAENDV G++ +A
Sbjct: 384 TDLLSLTSDAENDVSGSQPIA 404

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226027|ref|NP_179097.1| uncharacterized protein [Arabidopsis thaliana] gi|3650033|gb|AAC61288.1| unknown protein [Arabidopsis thaliana] gi|17380884|gb|AAL36254.1| unknown protein [Arabidopsis thaliana] gi|19698843|gb|AAL91157.1| unknown protein [Arabidopsis thaliana] gi|20465935|gb|AAM20153.1| unknown protein [Arabidopsis thaliana] gi|330251255|gb|AEC06349.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/406 (62%), Positives = 292/406 (71%), Gaps = 32/406 (7%)

Query: 2   ATLLSFLSSLP-LCHSPPPQRRRFPPSPSNFSPLRFTAQEPRKSRSLAVSSSSSSSSSPF 60
            TL SF  SLP L H P        P P  F   RF     R+ RSL ++SSS++SS+ F
Sbjct: 4   TTLSSFSLSLPQLLHKPTK------PLPFLFLLPRFN----RRFRSLTITSSSTTSSNNF 53

Query: 61  DDFCSKLNSPLPD-------SSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTIS 113
              C      L D        S KK VL+ +IQE+EPLDV+LIQKDVP TTLDAMKRTIS
Sbjct: 54  SSNCGDDGFSLDDFTLHSDSRSPKKCVLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTIS 113

Query: 114 SMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQT 173
            MLGLLPSDRF V IE+LWEPLSKLLVSSMMTGYTLRNAEYRL LE+NLD+  G  ++  
Sbjct: 114 GMLGLLPSDRFQVHIESLWEPLSKLLVSSMMTGYTLRNAEYRLFLEKNLDMSGGGLDSHA 173

Query: 174 SECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILN 233
           SE ++ D+ G          F  ++ +SS+      +L+E I  EGLG ++ E Q+YIL 
Sbjct: 174 SENTEYDMEGT---------FPDEDHVSSKRDSRTQNLSETIDEEGLGRVSSEAQEYILR 224

Query: 234 LQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKE 293
           LQS+LSS+KKEL E++RK++ALQMQQFVGEEKNDLLDYLRSLQPEKV ELSEP  PE+KE
Sbjct: 225 LQSQLSSVKKELQEMRRKNAALQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPAAPEVKE 284

Query: 294 TIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWS-KDCAELVENTSLHFQPQISLTRD 352
           TIHSVVHGLLATLSPKMHSK P  E   T  V   S +DCAELVENTSL FQP ISLTRD
Sbjct: 285 TIHSVVHGLLATLSPKMHSKFPASEVPPTETVKAKSDEDCAELVENTSLQFQPLISLTRD 344

Query: 353 YLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA 398
           YLARLLFWCMLLGHYLRGLEYRMELME+LSLT DA    +G+E VA
Sbjct: 345 YLARLLFWCMLLGHYLRGLEYRMELMEVLSLTCDA----NGSENVA 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807127|ref|NP_001241094.1| uncharacterized protein LOC100812190 [Glycine max] gi|255641465|gb|ACU21008.1| unknown [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/407 (60%), Positives = 297/407 (72%), Gaps = 39/407 (9%)

Query: 1   MATLLSFLSSLPLCHSPPPQRRRFP---PSPSNFSPLRFTAQ-----EPRKSRSLAVSSS 52
           MATL S   SLPL H       R+P   P+PS F P    +      +PR++  L ++SS
Sbjct: 3   MATLSS---SLPLFH-------RYPNPNPNPSLFRPSLSLSFSFSRTKPRRAPFLVLASS 52

Query: 53  SSSSSSPFDDFCSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTI 112
           S        DF S         ++KKSVL  +IQE+EPLDV+ IQKDVPPTT DAMKRTI
Sbjct: 53  SH-------DFTS---------NSKKSVLTELIQEIEPLDVSHIQKDVPPTTTDAMKRTI 96

Query: 113 SSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQ 172
           S MLGLLPSD+FHV IEALWEPLSKLL+SSMMTGYTL N EYRLCLE+NLD+ EGD E  
Sbjct: 97  SGMLGLLPSDQFHVVIEALWEPLSKLLISSMMTGYTLHNVEYRLCLEKNLDMFEGDIEKP 156

Query: 173 TSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYIL 232
            +E ++ DL G++ +  N+ +F     LSS+    V+ L+ED  ++ LG+++ E  QYI 
Sbjct: 157 KAESTKVDLQGLMHDSVNVIDFGRDKSLSSK----VEKLHEDADIQELGDISAEALQYIF 212

Query: 233 NLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELK 292
           NLQSRLSS+KKEL EVKRKS+ALQMQQFVGEEKNDLLDYLRSLQPE+V +LSE T PELK
Sbjct: 213 NLQSRLSSMKKELHEVKRKSAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELK 272

Query: 293 ETIHSVVHGLLATLSPKMHSKVPPL-ENTATGMVNIWSKDCAELVENTSLHFQPQISLTR 351
           +TI  VVHGLLATLSPKMHSK   + ENT  G  N+ ++DCAE+VEN++  FQP +SLTR
Sbjct: 273 DTILFVVHGLLATLSPKMHSKPSTISENTTVGATNVGNEDCAEVVENSAHQFQPVVSLTR 332

Query: 352 DYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHGNEQVA 398
           DYLARLLFWCMLLGHYLRGLE R++L +LLSLTSD END  G++ + 
Sbjct: 333 DYLARLLFWCMLLGHYLRGLECRLDLTDLLSLTSDPENDASGSQPIT 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836128|ref|XP_002885946.1| hypothetical protein ARALYDRAFT_480378 [Arabidopsis lyrata subsp. lyrata] gi|297331786|gb|EFH62205.1| hypothetical protein ARALYDRAFT_480378 [Arabidopsis lyrata subsp. lyrata]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/386 (63%), Positives = 283/386 (73%), Gaps = 29/386 (7%)

Query: 21  RRRFPPSPSNFSPLRFTAQEPRKSRSLAVSSSSSSSSS-------PFDDFCSKLNSPLPD 73
           R+   P P  F   RF     R+ RSL ++SSSS+ SS         DDF    +S  P 
Sbjct: 18  RKPTKPLPFLFLLPRFN----RRFRSLTITSSSSNFSSNCGDDGFSLDDFTLHSDSRSP- 72

Query: 74  SSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWE 133
              KK VL+ +IQE+EPLDV+LIQKDV  TTLDAMKRTIS MLGLLPSDRF V IE+LWE
Sbjct: 73  ---KKCVLSDLIQEIEPLDVSLIQKDVRVTTLDAMKRTISGMLGLLPSDRFQVHIESLWE 129

Query: 134 PLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDE 193
           PLSKLLVSSMMTGYTLRNAEYRL LE+NL++   D E++TSE ++ D+ G          
Sbjct: 130 PLSKLLVSSMMTGYTLRNAEYRLFLEKNLEMSGEDLESRTSENTEYDMEGT--------- 180

Query: 194 FSGKNELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSS 253
           F  ++ +SS+       L+E I  EGLG ++ E Q+YI  LQS+LSS+KKEL E++RK++
Sbjct: 181 FPDEDTVSSKRDSITQSLSETIDEEGLGRVSSEAQEYIFRLQSQLSSVKKELQEMRRKNA 240

Query: 254 ALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSK 313
           ALQMQQFVGEEKNDLLDYLRSLQPEKV ELSEP  PE+KETIHSVVHGLLATLSPKMHSK
Sbjct: 241 ALQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPAAPEVKETIHSVVHGLLATLSPKMHSK 300

Query: 314 VPPLENTATGMVNIWS-KDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLE 372
            P  E   T  V   S +DCAELVENTSL FQP ISLTRDYLARLLFWCMLLGHYLRGLE
Sbjct: 301 FPASEVPPTETVKAKSDEDCAELVENTSLQFQPLISLTRDYLARLLFWCMLLGHYLRGLE 360

Query: 373 YRMELMELLSLTSDAENDVHGNEQVA 398
           YRMELME+LSLT DA    +G+E VA
Sbjct: 361 YRMELMEVLSLTCDA----NGSENVA 382

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	398
TAIR|locus:2060495	386	AT2G14910 [Arabidopsis thalian	0.864	0.891	0.641	7.8e-110
TAIR|locus:2147875	355	AT5G14970 "AT5G14970" [Arabido	0.535	0.6	0.390	6.3e-37
TAIR|locus:2026669	341	AT1G63610 "AT1G63610" [Arabido	0.469	0.548	0.247	1.4e-13

TAIR|locus:2060495 AT2G14910 [Arabidopsis thaliana (taxid:3702)]

 Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
 Identities = 234/365 (64%), Positives = 268/365 (73%)

Query:    42 RKSRSLAVXXXXXXXXXPFDDFCSKLNSPLPD-------SSTKKSVLASMIQEVEPLDVT 94
             R+ RSL +          F   C      L D        S KK VL+ +IQE+EPLDV+
Sbjct:    35 RRFRSLTITSSSTTSSNNFSSNCGDDGFSLDDFTLHSDSRSPKKCVLSDLIQEIEPLDVS 94

Query:    95 LIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEY 154
             LIQKDVP TTLDAMKRTIS MLGLLPSDRF V IE+LWEPLSKLLVSSMMTGYTLRNAEY
Sbjct:    95 LIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLLVSSMMTGYTLRNAEY 154

Query:   155 RLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKNELSSEFQQNVDDLNED 214
             RL LE+NLD+  G  ++  SE ++ D+ G          F  ++ +SS+      +L+E 
Sbjct:   155 RLFLEKNLDMSGGGLDSHASENTEYDMEGT---------FPDEDHVSSKRDSRTQNLSET 205

Query:   215 IGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYLRS 274
             I  EGLG ++ E Q+YIL LQS+LSS+KKEL E++RK++ALQMQQFVGEEKNDLLDYLRS
Sbjct:   206 IDEEGLGRVSSEAQEYILRLQSQLSSVKKELQEMRRKNAALQMQQFVGEEKNDLLDYLRS 265

Query:   275 LQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWS-KDCA 333
             LQPEKV ELSEP  PE+KETIHSVVHGLLATLSPKMHSK P  E   T  V   S +DCA
Sbjct:   266 LQPEKVAELSEPAAPEVKETIHSVVHGLLATLSPKMHSKFPASEVPPTETVKAKSDEDCA 325

Query:   334 ELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLSLTSDAENDVHG 393
             ELVENTSL FQP ISLTRDYLARLLFWCMLLGHYLRGLEYRMELME+LSLT DA    +G
Sbjct:   326 ELVENTSLQFQPLISLTRDYLARLLFWCMLLGHYLRGLEYRMELMEVLSLTCDA----NG 381

Query:   394 NEQVA 398
             +E VA
Sbjct:   382 SENVA 386

GO:0009507 "chloroplast" evidence=ISM

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:2147875 AT5G14970 "AT5G14970" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 89/228 (39%), Positives = 144/228 (63%)

Query:    79 SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKL 138
             +V+A+++  ++PLD ++I K +  +  D+MK+TISSMLGLLPSD+F V +    +PL +L
Sbjct:    78 AVIANLVNRIQPLDTSVISKGLSDSAKDSMKQTISSMLGLLPSDQFSVSVTISEQPLYRL 137

Query:   139 LVSSMMTGYTLRNAEYRLCLERNLDVHEGDGENQTSECSQTDLHGMLLNRENIDEFSGKN 198
             L+SS++TGYTL NAEYR+ L RN D+     + +  + S          ++N+  F  + 
Sbjct:   138 LISSIITGYTLWNAEYRVSLRRNFDIPIDPRKEEEDQSS----------KDNV-RFGSEK 186

Query:   199 ELSSEFQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQ 258
              +S +    V++  E +  +  G+++PE   YI  LQS LSS+K+EL   K+K+  ++ +
Sbjct:   187 GMSEDLGNCVEEF-ERLSPQVFGDLSPEALSYIQLLQSELSSMKEELDSQKKKALRIECE 245

Query:   259 QFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATL 306
             +  G  +NDLLDYLRSL PE V ELS+ + PE++E ++ +V  +L  L
Sbjct:   246 K--GN-RNDLLDYLRSLDPEMVTELSQLSSPEVEEIVNQLVQNVLERL 290

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

TAIR|locus:2026669 AT1G63610 "AT1G63610" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 51/206 (24%), Positives = 110/206 (53%)

Query:    68 NSPLPDSSTKKSVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVF 127
             N       +++ +L   +Q V+P  + +  K  P   ++AM++T+++M+G LP   F V 
Sbjct:    77 NGTRQQPKSRRDILLEYVQNVKPEFMEMFVKRAPKHVVEAMRQTVTNMIGTLPPQFFAVT 136

Query:   128 IEALWEPLSKLLVSSMMTGYTLRNAEYRLCLERNLDV-------HEGDGENQTSECSQTD 180
             + ++ E L++L++S +MTGY  RNA+YRL L+++L+         +  G+   +  +Q +
Sbjct:   137 VTSVAENLAQLMMSVLMTGYMFRNAQYRLELQQSLEQVALPEPRDQKGGDEDYAPGTQKN 196

Query:   181 LHGMLLNRENIDEFSGKNELSSE-----FQQNVDDLNEDIGVEGLGEMTPEVQQYILNLQ 235
             + G ++   N+   SG  ++ ++      +  +++LN  +G +   +   E+ +Y+ +L+
Sbjct:   197 VSGEVIRWNNV---SGPEKIDAKKYIELLEAEIEELNRQVGRKSANQQN-EILEYLKSLE 252

Query:   236 SRLSSIKKELCEVKRKSSALQMQQFV 261
              +  ++K EL     +  A+ M  FV
Sbjct:   253 PQ--NLK-ELTSTAGEDVAVAMNTFV 275


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      398       356   0.00080  117 3  11 23  0.43    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  230 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.40u 0.10s 37.50t   Elapsed:  00:00:02
  Total cpu time:  37.40u 0.10s 37.50t   Elapsed:  00:00:02
  Start:  Tue May 21 02:53:01 2013   End:  Tue May 21 02:53:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	398
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	1e-27
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	8e-24

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score =  104 bits (261), Expect = 1e-27
 Identities = 42/85 (49%), Positives = 54/85 (63%)

Query: 79  SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLLPSDRFHVFIEALWEPLSKL 138
           +VL   IQ + P  +  +     P  L+AM+R +S +LG LPSD F V I+   E L++L
Sbjct: 1   NVLLQYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSDHFEVTIQTSRENLAQL 60

Query: 139 LVSSMMTGYTLRNAEYRLCLERNLD 163
           L SSMMTGY LRNAE RL LER+L 
Sbjct: 61  LASSMMTGYFLRNAEQRLELERSLG 85

This family contains several uncharacterized plant proteins. Length = 85

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 93.8 bits (234), Expect = 8e-24
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 32/117 (27%)

Query: 266 NDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMV 325
           N LL Y++SL PE +  L++   PE+ E +   V GLL +L                   
Sbjct: 1   NVLLQYIQSLPPETLARLADSASPEVLEAMRRNVSGLLGSLPSD---------------- 44

Query: 326 NIWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLS 382
                           HF+  I  +R+ LA+LL   M+ G++LR  E R+EL   L 
Sbjct: 45  ----------------HFEVTIQTSRENLAQLLASSMMTGYFLRNAEQRLELERSLG 85

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	398
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.97
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.95

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.97  E-value=5.5e-32  Score=222.09  Aligned_cols=85  Identities=47%  Similarity=0.682  Sum_probs=83.7

Q ss_pred             hHHHHHhhhcCchhhhhhcccCChHHHHHHHHHHHHhhcCC-CCCCeeeEEEecchhHHHHHHHHHhhhHhhhhhhhhhH
Q 015936           79 SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTISSMLGLL-PSDRFHVFIEALWEPLSKLLVSSMMTGYTLRNAEYRLC  157 (398)
Q Consensus        79 n~L~~yvqs~~Pe~v~~~sk~~speV~e~i~~~v~~lLG~L-p~~~f~v~i~tsre~La~Llas~mMtGYfLrnaE~Rl~  157 (398)
                      |.||+|||+++|+.+++|+++|||||+|+|++||.+|||.+ |+++|+++|+|+|++||+||+|+|||||||||||||++
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~   80 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLSPSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQRLE   80 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCCCcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             hhhhcc
Q 015936          158 LERNLD  163 (398)
Q Consensus       158 Le~sl~  163 (398)
                      ||++|+
T Consensus        81 Le~sL~   86 (86)
T PF05542_consen   81 LERSLK   86 (86)
T ss_pred             HHHhcC
Confidence            999985

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.95  E-value=1.7e-27  Score=195.56  Aligned_cols=86  Identities=48%  Similarity=0.797  Sum_probs=81.2

Q ss_pred             hHHHHHHhccChHHHHhhcCCCChHHHHHHHHHHHHHhcccCccccCCCCCCccccccccccccchhhhHhhhccCCccC
Q 015936          266 NDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLLATLSPKMHSKVPPLENTATGMVNIWSKDCAELVENTSLHFQP  345 (398)
Q Consensus       266 N~LL~YLrSL~pe~l~~Ls~~~S~EV~e~I~~~VqgLLg~l~~~~~s~~~p~e~~~~G~~n~g~~d~~Elv~~~~~~f~~  345 (398)
                      |+||+||++++||.++++++++||||+|+|+++|++|||.++|                               +++|++
T Consensus         1 n~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~p-------------------------------~~~~~~   49 (86)
T PF05542_consen    1 NDLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLSP-------------------------------SDQFNV   49 (86)
T ss_pred             ChHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCCC-------------------------------cccCcc
Confidence            7899999999999999999999999999999999999999932                               147899


Q ss_pred             ceeecHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHhc
Q 015936          346 QISLTRDYLARLLFWCMLLGHYLRGLEYRMELMELLS  382 (398)
Q Consensus       346 ~I~~sr~~LarLl~w~M~~Gy~LR~lE~R~eL~~~L~  382 (398)
                      +|++++++|||||+||||+|||||++|+|++|+++|+
T Consensus        50 ~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~   86 (86)
T PF05542_consen   50 TIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK   86 (86)
T ss_pred             eeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	398
3c1n_C	473	Crystal Structure Of Allosteric Inhibition Threonin		8e-05
2hmf_A	469	Structure Of A Threonine Sensitive Aspartokinase Fr		8e-05

>pdb|3C1N|C Chain C, Crystal Structure Of Allosteric Inhibition Threonine-Sensitive Aspartokinase From Methanococcus Jannaschii With L-Threonine Length = 473

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 191 IDEFSGKNELSSEFQQNVDDLNED-----IGVEGLGEMTPEVQQYILNLQSRLSS--IKK 243
           I+E     E+  E ++ +D   E+     IGV  LGE+TP+ + YIL+   RLSS  +  
Sbjct: 80  IEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSG 139
Query: 244 ELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLL 303
            + ++  KS AL+     G E   + D        K +E+ E   P LKE I  VV G +
Sbjct: 140 AIRDLGEKSIALE-----GGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFI 194
Query: 304 AT 305
            T
Sbjct: 195 GT 196

>pdb|2HMF|A Chain A, Structure Of A Threonine Sensitive Aspartokinase From Methanococcus Jannaschii Complexed With Mg-Adp And Aspartate Length = 469

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 191 IDEFSGKNELSSEFQQNVDDLNED-----IGVEGLGEMTPEVQQYILNLQSRLSS--IKK 243
           I+E     E+  E ++ +D   E+     IGV  LGE+TP+ + YIL+   RLSS  +  
Sbjct: 79  IEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSG 138
Query: 244 ELCEVKRKSSALQMQQFVGEEKNDLLDYLRSLQPEKVVELSEPTCPELKETIHSVVHGLL 303
            + ++  KS AL+     G E   + D        K +E+ E   P LKE I  VV G +
Sbjct: 139 AIRDLGEKSIALE-----GGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFI 193
Query: 304 AT 305
            T
Sbjct: 194 GT 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	398
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 7e-09
 Identities = 73/401 (18%), Positives = 124/401 (30%), Gaps = 115/401 (28%)

Query: 56  SSSPFDDFCSKLNSPLPDSSTKK---SVLASMIQEVEPLDVTLIQKDVPPTTLDAMKRTI 112
           S    D     + S    S T +   ++L+   + V+     +++ +     +  +K   
Sbjct: 47  SKEEIDHI---IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK-FLMSPIKTEQ 102

Query: 113 SSMLGLLPSDRFHVFIEA---LW---EPLSKLLVSSMMTGYTLRNAEYRLCLERNLDVHE 166
                  PS    ++IE    L+   +  +K  VS +     LR A   L   +N+ +  
Sbjct: 103 RQ-----PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-- 155

Query: 167 GDGENQTSECSQTDLHGMLLNRENIDEFSGKNEL------SSEFQQNVDD----LNEDIG 216
                           G+L         SGK  +      S + Q  +D     LN    
Sbjct: 156 ---------------DGVL--------GSGKTWVALDVCLSYKVQCKMDFKIFWLN---- 188

Query: 217 VEGLGEM-TPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQ-QFVGEEKNDLL---DY 271
              L    +PE    +  LQ  L  I          SS ++++   +  E   LL    Y
Sbjct: 189 ---LKNCNSPE--TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 272 LRSL------QPEKVVELSEPTCPELKET-IHSVVHGLLATLSPKMHSKVPPLENTATGM 324
              L      Q  K       +C  L  T    V   L A       +    L++ +  +
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA-----TTTHISLDHHSMTL 298

Query: 325 ------------VNIWSKDCAELVENTSLHFQPQ-ISL----TRDYLARLLFW----CML 363
                       ++   +D    V  T+    P+ +S+     RD LA    W    C  
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTN----PRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 364 LGH-------YLRGLEYRMELMELLSLTSDAENDVHGNEQV 397
           L          L   EYR ++ + LS+        H    +
Sbjct: 355 LTTIIESSLNVLEPAEYR-KMFDRLSVFPP---SAHIPTIL 391

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 69/498 (13%), Positives = 143/498 (28%), Gaps = 138/498 (27%)

Query: 12  PLCHSPPPQRRRFPPSPSNFSPLRFTAQEPR--------------KSRSLAVSSSSSSS- 56
            L +      +        +  LR    E R              K+  +A+    S   
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT-WVALDVCLSYKV 176

Query: 57  --SSPFDDF------CSKLNSPLPDSSTKKSVLASMIQEVEPLDVTLI-QKDVPPTTLDA 107
                F  F      C+      P++  +   L  ++ +++P   +           + +
Sbjct: 177 QCKMDFKIFWLNLKNCNS-----PETVLEM--LQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 108 MKRTISSML-------GLLPSDRFHVFIEALWEPL---SKLLVSSMMTGYTLRNAE---- 153
           ++  +  +L        LL     +V     W       K+L+       T R  +    
Sbjct: 230 IQAELRRLLKSKPYENCLLVLL--NVQNAKAWNAFNLSCKILL-------TTRFKQVTDF 280

Query: 154 ------YRLCLERNLDVHEGDGENQTSE-------CSQTDL-------HGMLLN------ 187
                   + L+           ++          C   DL       +   L+      
Sbjct: 281 LSAATTTHISLD---HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337

Query: 188 RE-----------NIDEFSGKNELS------SEFQQNVDDL-----NEDIGVEGL----G 221
           R+           N D+ +   E S      +E+++  D L     +  I    L     
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 222 EMTPEVQQYILNLQSRLSSIKKELCEVKRKSSALQMQQFVGEEKNDLLDYL-RSL----Q 276
           ++       ++N   + S ++K   + K  + ++       + K +    L RS+     
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEK---QPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454

Query: 277 PEKVVELSEPTCPELKETIHS-VVHGLLATLSPKMHSKVPP-------LENT--ATGMVN 326
             K  +  +   P L +  +S + H L     P+  +           LE          
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514

Query: 327 IWSKDCAELVENTSLHFQPQISLTRDYLARLLFWCMLLGHYLRGLE---YRMELMELLSL 383
             S      ++     ++P I        RL+     +  +L  +E      +  +LL +
Sbjct: 515 NASGSILNTLQQLKF-YKPYICDNDPKYERLV---NAILDFLPKIEENLICSKYTDLLRI 570

Query: 384 TSDAENDVHGNE---QVA 398
              AE++    E   QV 
Sbjct: 571 ALMAEDEAIFEEAHKQVQ 588

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	398
1nkp_B	83	MAX protein, MYC proto-oncogene protein; transcrip	88.51
1hlo_A	80	Protein (transcription factor MAX); transcriptiona	83.34

>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B

Probab=88.51  E-value=0.67  Score=36.52  Aligned_cols=33  Identities=15%  Similarity=0.392  Sum_probs=28.8

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Q 015936          225 PEVQQYILNLQSRLSSIKKELCEVKRKSSALQM  257 (398)
Q Consensus       225 ~eA~~YI~~Lqsel~sl~keL~~~k~k~~~l~m  257 (398)
                      -.|.+||..|+.++..++.|++++++.+..++.
T Consensus        43 ~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~   75 (83)
T 1nkp_B           43 DKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQ   75 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999887776643

>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1

Probab=83.34  E-value=0.93  Score=35.59  Aligned_cols=27  Identities=15%  Similarity=0.411  Sum_probs=23.9

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015936          225 PEVQQYILNLQSRLSSIKKELCEVKRK  251 (398)
Q Consensus       225 ~eA~~YI~~Lqsel~sl~keL~~~k~k  251 (398)
                      -.|.+||..|+.++..|+.+++++++.
T Consensus        53 ~~Ai~YI~~L~~~~~~L~~e~~~L~~~   79 (80)
T 1hlo_A           53 DKATEYIQYMRRKNHTHQQDIDDLKRQ   79 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            489999999999999999999887663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00