Citrus Sinensis ID: 015980


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MESGTGAGIQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAEPV
cccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHcccccccccccccc
cccccccccccEEEEEcccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHEHHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEcHHHHHHHHHHHHHHHHHHHHcccccccccccEccccHHHHHHHHHHHHHHHHHHHHHHHcHHEcccccccccc
mesgtgagiqrraifkedswfsqfrngsnpwMARYVYALIFLVANLLAWVVRDYSSAALTEMEKlkncqgghhclgaqgVLRVSLGCFVFYIIMFLLTagtsklhgtrdlwhsgWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDcclseknaerCHIHVMLIATVAYIICIVGIIMMYiwytpdptcllNIFFITWTLVLLQLMTSvslhpkinsgflapglMGLYIIFLCWcairsepagetcnrkaeasnktdWLTIISFVVALLAIVIATFstgidsqcfqlrksespaeddvpygygFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIlkssraaepv
mesgtgagiqrraifkedswfsqFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAEPV
MESGTGAGIQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAyiicivgiimmyiWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAEPV
**********RRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN****ASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLR*******DDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIL*********
***********RAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAG*********SNKTDWLTIISFVVALLAIVIATF*********************VPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAA***
********IQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPA**********SNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAEPV
*********QRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFST*****************DDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSS******
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MESGTGAGIQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAEPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
Q54UF8417 Probable serine incorpora yes no 0.891 0.848 0.263 3e-30
Q13530473 Serine incorporator 3 OS= yes no 0.904 0.758 0.233 1e-29
Q5R533473 Serine incorporator 3 OS= yes no 0.904 0.758 0.231 2e-29
Q7TNK0453 Serine incorporator 1 OS= yes no 0.906 0.794 0.259 5e-29
Q9QZI8453 Serine incorporator 1 OS= yes no 0.906 0.794 0.254 2e-28
Q3MHV9453 Serine incorporator 1 OS= yes no 0.909 0.796 0.260 9e-27
Q9NRX5453 Serine incorporator 1 OS= no no 0.906 0.794 0.261 5e-26
Q5R419453 Serine incorporator 1 OS= no no 0.906 0.794 0.261 7e-26
A7S4N4456 Probable serine incorpora N/A no 0.780 0.679 0.241 1e-25
A4FUZ5472 Serine incorporator 3 OS= no no 0.904 0.760 0.229 1e-24
>sp|Q54UF8|SERIC_DICDI Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1 Back     alignment and function desciption
 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 202/394 (51%), Gaps = 40/394 (10%)

Query: 34  RYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNC-QGGHHCLGAQGVLRVSLGCFVFYI 92
           R VY + FL+ +++A+++  ++ +    ++ LK C +G + C GA  V R++ G  +++I
Sbjct: 23  RLVYVVFFLLVSIVAYILSYWTFSWFNNLDVLKICSKGDNECKGALVVYRLTFGLALYHI 82

Query: 93  IMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVF 152
           ++ L+         +R     G+W  KI+L   L  + F +P+SF ++Y  I+ F A +F
Sbjct: 83  LLGLVMINVKSAGDSRAKLQDGYWPLKILLLGVLIFVSFFIPNSFFRVYTWISIFSAAIF 142

Query: 153 LLIQLISVISFITWLNDCCLSE-----KNAERCHIHVMLIATVAYIICIVGIIMMYIWYT 207
           + IQL+ +I     LN+ C+ +      + ++ ++ + +++  +  + + G ++M ++Y 
Sbjct: 143 IFIQLVLLIECAYSLNESCVRKIEDEGHSGKKWYVLLCVLSFGSIALAVAGTVLMLVFYG 202

Query: 208 PDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRS 262
              +C +N F+I + L +  ++  +S+  K+     +SG    G++ LY  +L + AI S
Sbjct: 203 RG-SCSINQFYIVFNLGICLIVGVLSISEKVREYRPSSGLFQSGVVMLYCTYLIYSAINS 261

Query: 263 EPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESP------ 316
           EP G TC+    +S K   + II  V  ++++  + F +   ++        S       
Sbjct: 262 EPPG-TCSSNNTSSPKESTI-IIGAVFTIISVCYSAFRSSDSTELLGNHNHYSSIPTDPN 319

Query: 317 ------AEDD---VPYGYGFFHFVFATGAMYFAMLLIGW-----------NTHHTIRKWT 356
                 A+D+     Y Y FFHF FA GAMY + LL  W           +T  +    +
Sbjct: 320 AETTGVADDECECTAYNYSFFHFTFACGAMYLSALLTNWATMTSTDITSSSTSSSNSTIS 379

Query: 357 IDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKS 390
           +D G  S WV++V+ W+ V +YLW L+ P++L++
Sbjct: 380 VDSGMVSVWVKVVSSWVVVLLYLWTLIGPILLRN 413




Enhances the incorporation of serine into phosphatidylserine and sphingolipids.
Dictyostelium discoideum (taxid: 44689)
>sp|Q13530|SERC3_HUMAN Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2 Back     alignment and function description
>sp|Q5R533|SERC3_PONAB Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1 Back     alignment and function description
>sp|Q7TNK0|SERC1_RAT Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1 Back     alignment and function description
>sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1 Back     alignment and function description
>sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRX5|SERC1_HUMAN Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R419|SERC1_PONAB Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1 Back     alignment and function description
>sp|A7S4N4|SERIC_NEMVE Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1 Back     alignment and function description
>sp|A4FUZ5|SERC3_BOVIN Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
255549064398 conserved hypothetical protein [Ricinus 0.994 0.992 0.813 0.0
224143490398 predicted protein [Populus trichocarpa] 1.0 0.997 0.793 0.0
225445298397 PREDICTED: probable serine incorporator- 0.994 0.994 0.769 0.0
297738854397 unnamed protein product [Vitis vinifera] 0.994 0.994 0.767 0.0
356511347398 PREDICTED: serine incorporator 3-like [G 0.994 0.992 0.758 0.0
356524028398 PREDICTED: serine incorporator 3-like [G 0.994 0.992 0.750 1e-180
147790872397 hypothetical protein VITISV_041932 [Viti 0.954 0.954 0.775 1e-179
42565162409 Serinc-domain containing serine and sphi 0.987 0.958 0.729 1e-179
449443319400 PREDICTED: serine incorporator 1-like [C 0.982 0.975 0.767 1e-178
297790720394 hypothetical protein ARALYDRAFT_497050 [ 0.992 1.0 0.748 1e-176
>gi|255549064|ref|XP_002515588.1| conserved hypothetical protein [Ricinus communis] gi|223545532|gb|EEF47037.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/396 (81%), Positives = 353/396 (89%), Gaps = 1/396 (0%)

Query: 1   MESGTGAGIQRRA-IFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAAL 59
           MESGT +   R A I K+ SWFSQFRNG NPWMAR+ YALIFL ANLLAW  RDY   AL
Sbjct: 1   MESGTSSRNDRNAAILKDPSWFSQFRNGCNPWMARFAYALIFLSANLLAWAARDYGHGAL 60

Query: 60  TEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAK 119
           +EME+L+ C G   CLGA+GVLRVSLGCFVF++IMFL T GTSK H  RD WHSGWW  K
Sbjct: 61  SEMERLRVCAGKSDCLGAEGVLRVSLGCFVFFMIMFLSTVGTSKFHDPRDSWHSGWWGPK 120

Query: 120 IVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAER 179
           IVLWIALTI+ FL+PS+FI+LYGEIAHFGAGVFLLIQLIS+ISFITWLNDCCLSEK AER
Sbjct: 121 IVLWIALTIMTFLVPSAFIRLYGEIAHFGAGVFLLIQLISIISFITWLNDCCLSEKYAER 180

Query: 180 CHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN 239
           CHIH MLIATVAY++CIVGIIMMYIWYTP+ +CLLNIFFITWTLVLLQ++TSVSLHPK+N
Sbjct: 181 CHIHAMLIATVAYVVCIVGIIMMYIWYTPETSCLLNIFFITWTLVLLQVITSVSLHPKVN 240

Query: 240 SGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATF 299
           +GFL PGLMGLY++FLCWCAIRSEPAGE+CNRKAEAS +TDWLTIISFVVALLAIVIATF
Sbjct: 241 AGFLTPGLMGLYVVFLCWCAIRSEPAGESCNRKAEASKRTDWLTIISFVVALLAIVIATF 300

Query: 300 STGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDV 359
           STGIDSQCFQ RK E  AEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHH I+KWTIDV
Sbjct: 301 STGIDSQCFQFRKGEKEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHAIKKWTIDV 360

Query: 360 GWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAAE 395
           GWTSTWVR+VNEWLAVCVYLWMLVAP+ILK  + A+
Sbjct: 361 GWTSTWVRVVNEWLAVCVYLWMLVAPIILKCRQNAQ 396




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143490|ref|XP_002324973.1| predicted protein [Populus trichocarpa] gi|222866407|gb|EEF03538.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445298|ref|XP_002281302.1| PREDICTED: probable serine incorporator-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738854|emb|CBI28099.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356511347|ref|XP_003524388.1| PREDICTED: serine incorporator 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356524028|ref|XP_003530635.1| PREDICTED: serine incorporator 3-like [Glycine max] Back     alignment and taxonomy information
>gi|147790872|emb|CAN70494.1| hypothetical protein VITISV_041932 [Vitis vinifera] Back     alignment and taxonomy information
>gi|42565162|ref|NP_189089.3| Serinc-domain containing serine and sphingolipid biosynthesis protein [Arabidopsis thaliana] gi|17381270|gb|AAL36053.1| AT3g24470/MXP5_4 [Arabidopsis thaliana] gi|37201996|gb|AAQ89613.1| At3g24470/MXP5_4 [Arabidopsis thaliana] gi|332643379|gb|AEE76900.1| Serinc-domain containing serine and sphingolipid biosynthesis protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449443319|ref|XP_004139427.1| PREDICTED: serine incorporator 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297790720|ref|XP_002863245.1| hypothetical protein ARALYDRAFT_497050 [Arabidopsis lyrata subsp. lyrata] gi|297309079|gb|EFH39504.1| hypothetical protein ARALYDRAFT_497050 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:505006454394 MEE55 "maternal effect embryo 0.982 0.989 0.728 1.2e-163
TAIR|locus:2094869409 AT3G24460 [Arabidopsis thalian 0.987 0.958 0.707 3.9e-163
TAIR|locus:504956041422 AT2G33205 "AT2G33205" [Arabido 0.919 0.864 0.491 2.2e-98
TAIR|locus:2082415409 AT3G06170 [Arabidopsis thalian 0.727 0.706 0.276 1.3e-53
TAIR|locus:2200507412 AT1G16180 "AT1G16180" [Arabido 0.707 0.682 0.274 1.3e-49
DICTYBASE|DDB_G0281099417 DDB_G0281099 "TMS membrane pro 0.675 0.642 0.250 1.9e-37
UNIPROTKB|F1MBF9443 SERINC1 "Serine incorporator 1 0.612 0.548 0.280 1e-28
UNIPROTKB|Q3MHV9453 SERINC1 "Serine incorporator 1 0.612 0.536 0.280 1.3e-27
UNIPROTKB|Q9NRX5453 SERINC1 "Serine incorporator 1 0.609 0.534 0.283 2e-27
RGD|727843453 Serinc1 "serine incorporator 1 0.609 0.534 0.279 5.3e-27
TAIR|locus:505006454 MEE55 "maternal effect embryo arrest 55" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1593 (565.8 bits), Expect = 1.2e-163, P = 1.2e-163
 Identities = 284/390 (72%), Positives = 322/390 (82%)

Query:     1 MESGTGAGIQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALT 60
             ME+GT          K  SWF QFRNG NPWMARYVY LIFL+ANLLAW +RDY   ALT
Sbjct:     1 METGTSIDNTGYEGIKNGSWFIQFRNGCNPWMARYVYGLIFLLANLLAWALRDYGRGALT 60

Query:    61 EMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKI 120
             EM K KNC+ G  CLG +GVLRVS GCF+FY IMFL T GTSK H +RD WHSGWW AK+
Sbjct:    61 EMRKFKNCKEGGDCLGTEGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKL 120

Query:   121 VLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERC 180
              + + LTI PFLLPSS IQ YGEIAHFGAGVFLLIQLIS+ISFITWLN+C  ++K+AERC
Sbjct:   121 FMLLGLTIFPFLLPSSIIQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERC 180

Query:   181 HIHVMLIATVAXXXXXXXXXXXXXWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKINS 240
             H+HVML+AT A             WY P+P+CLLNIFFITWTL L+QLMTS+SLHPKIN+
Sbjct:   181 HVHVMLLATTAYTVCILGVILMYIWYVPEPSCLLNIFFITWTLFLIQLMTSISLHPKINA 240

Query:   241 GFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFS 300
             GFL P LMGLY++F+CWCAIRSEP GETCNRKAE S++TDWLTIISFVVALLA+VIATFS
Sbjct:   241 GFLTPALMGLYVVFICWCAIRSEPVGETCNRKAEGSSRTDWLTIISFVVALLAMVIATFS 300

Query:   301 TGIDSQCFQLRKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVG 360
             TG+DSQCFQ RK E+  ED +PYGYGFFHFVFATGAMYFAMLL+GWN HH+++KWTIDVG
Sbjct:   301 TGVDSQCFQFRKDENHEEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVG 360

Query:   361 WTSTWVRIVNEWLAVCVYLWMLVAPVILKS 390
             WTSTWVRIVNEWLAV VY+WMLVAP++LKS
Sbjct:   361 WTSTWVRIVNEWLAVGVYIWMLVAPMVLKS 390




GO:0016020 "membrane" evidence=IEA;ISS
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
TAIR|locus:2094869 AT3G24460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956041 AT2G33205 "AT2G33205" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082415 AT3G06170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200507 AT1G16180 "AT1G16180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281099 DDB_G0281099 "TMS membrane protein/tumour differentially expressed (TDE) family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBF9 SERINC1 "Serine incorporator 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MHV9 SERINC1 "Serine incorporator 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NRX5 SERINC1 "Serine incorporator 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|727843 Serinc1 "serine incorporator 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
pfam03348428 pfam03348, Serinc, Serine incorporator (Serinc) 2e-65
>gnl|CDD|217505 pfam03348, Serinc, Serine incorporator (Serinc) Back     alignment and domain information
 Score =  214 bits (546), Expect = 2e-65
 Identities = 113/405 (27%), Positives = 187/405 (46%), Gaps = 53/405 (13%)

Query: 32  MARYVYALIFLVANLLAWVVRDYSSAALTEMEKL------KNCQGGHHCLGAQGVLRVSL 85
             R  YALI L+ ++++W++   S   + +++K        +C     C+G   V RV  
Sbjct: 24  STRIAYALILLLNSIVSWIML--SPGVIKKLKKKIPGFCGVDCPDSE-CVGYSAVYRVCF 80

Query: 86  GCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLP-SSFIQLYGEI 144
              +F++I+ LL  G       R    +G+W  KI+L I L +  F +P   F  ++  I
Sbjct: 81  ALALFFLILALLMLGVKSSKDPRAAIQNGFWFFKILLLIGLIVGAFFIPNGFFFFVWMYI 140

Query: 145 AHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIATVA-YIICIVGIIM 201
              G+ +F+LIQLI ++ F     +  +   E    R     +L  T+  YI+ I   ++
Sbjct: 141 GVIGSFLFILIQLILLVDFAHSWAESWVEKYEDGNSRLWYAALLGVTLLMYILSIALTVL 200

Query: 202 MYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLC 256
           +YI++T    C +N FFI+  L+L  +++ VS+HPK+      SG L   ++ LY  +L 
Sbjct: 201 LYIFFTHGDGCGMNKFFISINLILCVIVSIVSIHPKVQEANPRSGLLQASVISLYCTYLT 260

Query: 257 WCAIRSEPAGETCNRKAEASNKTDWLTIISFVVALLAIVIATFSTGIDSQCFQLRKSESP 316
           W A+ SEP  + CN    +        II  ++  L I+ +T     +SQ  +L+ S   
Sbjct: 261 WSALSSEP-DKECNPLVRSKGTRTASIIIGALLTFLCILYSTTRAASNSQVGKLQLSSDL 319

Query: 317 -----------------------------AEDD----VPYGYGFFHFVFATGAMYFAMLL 343
                                        A+DD    V Y Y FFHF+F   ++Y  MLL
Sbjct: 320 VTEQPSQSRNESRAEALRAAVEEGSLPKSAQDDEKDGVTYSYSFFHFIFFLASLYVMMLL 379

Query: 344 IGWNTHHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIL 388
             W         T+   W + WV+I++ W+   +Y+W LVAP++L
Sbjct: 380 TNW-YSPDADFKTVGSTWAAVWVKIISSWVCYGLYIWTLVAPLVL 423


This is a family of eukaryotic membrane proteins which incorporate serine into membranes and facilitate the synthesis of the serine-derived lipids phosphatidylserine and sphingolipid. Members of this family contain 11 transmembrane domains and form intracellular complexes with key enzymes involved in serine and sphingolipid biosynthesis. Length = 428

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
KOG2592426 consensus Tumor differentially expressed (TDE) pro 100.0
PF03348429 Serinc: Serine incorporator (Serinc); InterPro: IP 100.0
PF08426412 ICE2: ICE2; InterPro: IPR013635 ICE2 is a fungal E 96.2
>KOG2592 consensus Tumor differentially expressed (TDE) protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=3.3e-123  Score=914.87  Aligned_cols=386  Identities=28%  Similarity=0.611  Sum_probs=350.3

Q ss_pred             CCCCccchhhhhhcccccccccccCCCCchhHHHHHHHHHHHHHHHHHHcccch-hHHhhcCCcccCCCC--CCcccchh
Q 015980            2 ESGTGAGIQRRAIFKEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYS-SAALTEMEKLKNCQG--GHHCLGAQ   78 (397)
Q Consensus         2 ~~~~~~~~~~~c~~~~~~~c~~c~~~~~s~~tR~~Y~~~fll~~ils~i~~~~~-~~~l~~~~~~~~C~~--~~~C~G~~   78 (397)
                      .++++..|  ||+-.++=+|++||+.+||+.||++|+++++++++++|+|+ ++ +++++|.|+.  |++  .+.|.|++
T Consensus         2 ~~~s~~~c--c~g~~acl~cs~cps~~nst~tRl~ya~~l~l~~~vs~i~~-~~~~~~l~k~p~~--c~~~~c~~~~gy~   76 (426)
T KOG2592|consen    2 SAASSVAC--CCGGAACLLCSCCPSLTNSTVTRLIYAFILLLGTLVSWIML-PGAEKQLNKLPWF--CEGNDCGKLLGYK   76 (426)
T ss_pred             chHHHHHH--hhcchHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHhhCCcc--ccCCCcccchhhh
Confidence            34556666  66622223478899999999999999999999999999999 65 6699999997  653  35568999


Q ss_pred             hhhhhhhhHHHHHHHHHHHHhccCCCCCccchhcccchhHHHHHHHHHHhheeecCch-hhHHHHHHHHHHHHHHHHHHH
Q 015980           79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSS-FIQLYGEIAHFGAGVFLLIQL  157 (397)
Q Consensus        79 aVyRvsfal~~Ff~l~~l~~i~v~ss~d~Ra~ihnGfW~~K~l~~~~l~v~~FfIP~~-f~~~y~~v~~~ga~~FiliQl  157 (397)
                      ||||+|||+++||++++++|+|||++||+|++||||||++|+++|+++.+++|||||+ +...|.+++++||++|||+||
T Consensus        77 AVyR~~f~~a~Ff~~lsllm~gVkss~D~R~~iqng~W~fK~i~~~~l~i~~FfIP~~~~~~~~~~v~~~Ga~~FILvqL  156 (426)
T KOG2592|consen   77 AVYRLCFGLACFFLLLSLLMIGVKSSKDPRAAIQNGFWFFKFILWFGLIVGSFFIPNGFFISFWFYVSVFGAALFILVQL  156 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcCCCHHHHHHcCcHHHHHHHHHHHHHheEEcCCccchhHHHHHHHHhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999997 677999999999999999999


Q ss_pred             HHHHHHHHHHhHHhhcc-cccchhHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhHHHHHHHHHHHHHHhhhhccc
Q 015980          158 ISVISFITWLNDCCLSE-KNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHP  236 (397)
Q Consensus       158 IlLvDFa~~wne~w~~~-~~~~~w~~~L~~~t~~~y~~si~~~v~my~~f~~~~~C~lN~~fIt~nliL~vi~svisl~p  236 (397)
                      ||||||||+|||+|++| ||++.||++|+++|+++|+++++++++||++|++++||++||+||++|+++|++++++|+||
T Consensus       157 vLLvDFaH~w~e~wv~~~Edsr~wy~~Ll~~T~~~Y~~s~~~~~l~fv~ft~~~~C~~nk~fi~~nlilcv~~si~sv~P  236 (426)
T KOG2592|consen  157 VLLVDFAHSWNESWVEKVEDSRFWYAALLGVTLLMYLLSLVATVLLFVYFTPGDGCGENKFFISVNLILCVAISILSVHP  236 (426)
T ss_pred             HHHHHHHhhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHhheEecCCCCCCcceEEEeechHHHHHHHHHhcCh
Confidence            99999999999999998 77788999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccc-----cccCcchhHHHHHHHhhhhhhhcCCCCCCCCCCcccCC-------------CCchhHHHHHHHHHHHHHHHh
Q 015980          237 KIN-----SGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEASN-------------KTDWLTIISFVVALLAIVIAT  298 (397)
Q Consensus       237 ~v~-----~gLLqssiv~~Y~~yLt~SAlss~P~~~~Cnp~~~~~~-------------~~~~~~iig~~~~~~~i~ys~  298 (397)
                      ++|     +||||||+|++|+||||||||+||| |++|||...+..             ..+.+.++|+++++++++|++
T Consensus       237 ~VQe~~P~SGLlQSsvIs~Y~~YLt~SAlss~P-e~~CNP~~~~~~~~t~~~~~~~~~~~~~~~~iiGli~~~lcilYsa  315 (426)
T KOG2592|consen  237 KVQEGQPRSGLLQSSVISLYTMYLTWSALSSEP-ENGCNPWLNSSKNVTITVGPGASVSTFDATNIIGLIFLLLCILYSA  315 (426)
T ss_pred             hhhcCCCCcccchhHHHHHHHHHHHHHHHhcCC-ccccChhhhcccccccccCcccccccccccchHHHHHHHHHHHHHH
Confidence            887     7999999999999999999999999 999999754321             225578999999999999999


Q ss_pred             cccCcccchhc--------------cc--CCCCCCCCCCCcchhHHHHHHHHHHHHHHHhhcCCCCcCCCcceeeecCce
Q 015980          299 FSTGIDSQCFQ--------------LR--KSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTIDVGWT  362 (397)
Q Consensus       299 ~~~~~~~~~~~--------------~~--~~~d~e~~~~~Y~ysfFH~vf~Las~Y~~M~lTnW~~~~~~~~~~~~~gw~  362 (397)
                      .|++++++...              ++  |+.|||+|++.|+|+|||++|+|||+|+||+||||+++++ +.+.++.+|+
T Consensus       316 lR~~s~~~l~k~~~~~~e~~~l~~~dG~~~~~d~Ek~GV~YsYsfFHfvf~LASlyvmmtLTnW~~~~~-~~~~v~~~w~  394 (426)
T KOG2592|consen  316 LRASSRTQLRKLTRSNEEEPLLPDEDGGGRANDNEKDGVTYSYSFFHFVFVLASLYVMMTLTNWYTPDE-DIWFVKSSWA  394 (426)
T ss_pred             hhccccccccccccccccccCccCCCCCcccccccCCCeeEeeeHHHHHHHHHHHHHHHHhccccCCCC-ceeEEeccch
Confidence            99988886641              11  2456788899999999999999999999999999999984 3378999999


Q ss_pred             ehhhhhHHHHHHHHHHHHHhhhcccccCCCCC
Q 015980          363 STWVRIVNEWLAVCVYLWMLVAPVILKSSRAA  394 (397)
Q Consensus       363 s~WVKi~s~W~~~~LY~WtLvAP~i~pdRdF~  394 (397)
                      ++||||+++|+|.+||+||||||+++|||||+
T Consensus       395 ~vWVKI~ssWic~~LY~WTlVAPli~p~Rdf~  426 (426)
T KOG2592|consen  395 SVWVKIVSSWICSGLYLWTLVAPLILPDRDFS  426 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccccccC
Confidence            99999999999999999999999999999996



>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines Back     alignment and domain information
>PF08426 ICE2: ICE2; InterPro: IPR013635 ICE2 is a fungal ER protein which has been shown to play an important role in forming/maintaining the cortical ER [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00