Citrus Sinensis ID: 016171

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
Protein Sequence
MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Secondary Structure (PSIPRED)
cccEEEEcccHHHHHHHHHHHccccEEEEEEEEEcccccccEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHccccccccccEEEEEEEccccEEEEEEEEEccccccccccccccccccccccEEEEEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEccEEccccccccccccEEEEEEEcccccccccccccccEEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHcccccccccccEEEEEccccccEEEcccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEcHHHHHHHHHHHHccccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccccccccccccccHccccHHHHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccEEEEEEEEEcccccccccccccEEEccccccEEEEEEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccEEEEcccEcccccccccccccEEEEEEEccccccccccEEEEEEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccEEEEEcccccEEEEcccccccHHHHHHHccc
Coil and Loop (DISEMBL)
MVNTVVVekpqllsaedrlsqsgLSAQVGLLigklsptldrgfifdfiptpqndageaacsvskddkkkppsksksqpsdsislvidkdwIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKavpileidsderllvhigysprrytcrnctitsnitssclrpcdlktglVLKTLRTFKctynfslrlpirlvgasntqTFSDILRQGISVHANELRGakavvdgnfvvndepcstdglhEVELLLPllndtsaeacsqkdVVGLLILSGsvcsfafltpkepisqAFSEIKGDIIMSLQSRLDVICdevdedlaptagggeeasnekpvSKLILHSLRktcglsfprrvfvpwladtyicdylqpsetlevcISKTII
Flexible Loop (DISEMBL)
mvntvvvekpqllsaedRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACsvskddkkkppsksksqpsdsislviDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAvpileidsderlLVHIGysprrytcrnCTITsnitssclrpcdLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAptagggeeasnekpvSKLILHSLRKTCGLSFPRRVFVPWLADTYICdylqpsetlevcisktii
Low Complexity Region (SEG)
MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVskddkkkppsksksqpsdsISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVElllpllNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Disordered region (IsUnstruct)
*************************AQVGLLIGKLSPTLDRGFIFDFIP********************************ISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVD********************KLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCIS****
Disordered Region (DISOPRED)
MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQN*******************************VIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVG*****TFSDILRQGISVHANELRGAKAVVDGNFVV*********LHEVELLL*****************GLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDED********************ILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Disordered Region (DISEMBL)
MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQND**************************SISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTA***********VSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Disordered Region (DISPRO)
*VNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPT********************************SLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAP*************VSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTII
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	394	2.2.26 [Sep-21-2011]
Q54QH3	456	Protein odr-4 homolog OS=	yes	no	0.852	0.736	0.265	5e-19
Q4PJX1	447	Protein odr-4 homolog OS=	yes	no	0.794	0.700	0.231	2e-14
Q5SWX8	454	Protein odr-4 homolog OS=	no	no	0.865	0.751	0.249	1e-13
Q5R6E9	454	Protein odr-4 homolog OS=	yes	no	0.769	0.667	0.245	2e-12
Q0VA36	448	Protein odr-4 homolog OS=	yes	no	0.807	0.709	0.246	2e-12
A3KNB6	446	Protein odr-4 homolog OS=	N/A	no	0.807	0.713	0.237	2e-11
Q5ZKH8	446	Protein odr-4 homolog OS=	yes	no	0.781	0.690	0.235	2e-10

>sp|Q54QH3|ODR4_DICDI Protein odr-4 homolog OS=Dictyostelium discoideum GN=DDB_G0283829 PE=3 SV=1

 Score = 95.9 bits (237), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 41/377 (10%)

Query: 17  DRLSQSGLSAQVGLLIGKLSPTLDRG-FIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSK 75
           ++L QS +  ++GLLIG+ S   ++  F+    PTP N       S + DD    P    
Sbjct: 16  NKLEQSHI--EIGLLIGQESEISEQQTFVLGLFPTPLN------ISNTDDDNNNKPINI- 66

Query: 76  SQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAA 135
               DSIS  IDK+WI E+  QV+ ML GGI +VGIY+   DS     T+      +   
Sbjct: 67  ----DSIS-SIDKEWILEYCHQVNIMLYGGIDIVGIYMIIPDS----DTLNEKNNESFIM 117

Query: 136 KAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLRTFKC 195
           K +  +    + + L  I YS ++    N   T++     L+  ++K   V+  L     
Sbjct: 118 KLLKSIHTIINSKSLQFISYS-KKTGLINGKATNSTQLYRLKSTEIK---VINNLENEFL 173

Query: 196 TYNFSLRLPIRLVGASNTQTFSDILRQGISVHANEL-RGAKAVVDGNFVVNDEPCSTDGL 254
           + +  L + I+L   +   +F ++ +  I +  N+L + +  +++  FV  +E  S    
Sbjct: 174 SLHCILPIDIKLKSKNGMISFENLKKDIIEIFENQLFKESTLLIENEFVSGNEIISQQFK 233

Query: 255 HEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSL 314
            + +L + LL +   ++ S   +      + +    A++   E I  AF  IK DII S+
Sbjct: 234 SKSKLNIDLLIN-QLDSISTSSLEFNFNNNNNTHCIAYIHQLEQIKTAFKFIKKDIIKSV 292

Query: 315 QSRLDVICDEVDEDLAPTAGGGE--EASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLAD 372
           +SR D++ +E+  +        +  + S E P+             L  PRRV + WL++
Sbjct: 293 ESRFDLLFNEISSNNNNNDNDQDNIKLSKESPI-------------LELPRRVNIQWLSN 339

Query: 373 TY-ICDYLQPSETLEVC 388
              ICDYL  + T++ C
Sbjct: 340 KISICDYLSSNGTIDDC 356

May play a role in the trafficking of a subset of G-protein coupled receptors.
Dictyostelium discoideum (taxid: 44689)

>sp|Q4PJX1|ODR4_MOUSE Protein odr-4 homolog OS=Mus musculus GN=Odr4 PE=2 SV=2

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 161/380 (42%), Gaps = 67/380 (17%)

Query: 29  GLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDK 88
           GLLIG+ S   D  ++     TP  +         ++DK K P              +D+
Sbjct: 28  GLLIGQCSSQKD--YVILATRTPPKE--------EQNDKVKQPRAKLDN--------LDE 69

Query: 89  DWIAEHARQVSRMLLGGIKVVGIYVWAT---DSAFKNSTIELCQTVNAAAKAVPILEIDS 145
           +W  EHA QVSRML GG+ V+GI++  T      F+N+   L  ++  +     + ++  
Sbjct: 70  EWATEHASQVSRMLPGGLVVLGIFIITTLELADDFQNALRRLIFSMEKSMSRKRLWDVTE 129

Query: 146 D---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYNFSL 201
           D   ER+ +HI  S ++ +CR   +    +S+  RP D K    V  +  +  CT + ++
Sbjct: 130 DEVSERVTLHICSSTKKISCRTYDVQDPKSSA--RPADWKYQSRVSASWLSLDCTVHVNI 187

Query: 202 RLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVND------------EPC 249
            +P  L   S + T     + G++  A ++     +++G    ND               
Sbjct: 188 HIP--LSATSVSYTLEKNTKSGLTRWAKQIENGVYLINGQVKGNDCDLLEGQKKSRGNTQ 245

Query: 250 STDGLHEVELLLPLLNDTSAEACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIK 307
           +T    +V +L  LL ++   + +   +  G + L G+V   A++    P +  A   +K
Sbjct: 246 ATAHSFDVRVLTQLLLNSDHRSTATVQICSGSVNLRGNVKCRAYIHSNRPKVKDAVQAVK 305

Query: 308 GDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFV 367
            DI+ ++  R +++ ++                       L+L+ + +      P+RVFV
Sbjct: 306 RDILNTVADRCEILFED-----------------------LLLNEIPEKKNYELPQRVFV 342

Query: 368 PWLADT-YICDYLQPSETLE 386
           P    T  +CDY    E+ E
Sbjct: 343 PLPGSTVMLCDYKFGDESAE 362

May play a role in the trafficking of a subset of G-protein coupled receptors.

Mus musculus (taxid: 10090)

>sp|Q5SWX8|ODR4_HUMAN Protein odr-4 homolog OS=Homo sapiens GN=ODR4 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 179/413 (43%), Gaps = 72/413 (17%)

Query: 1   MVNTVVVEKP--QLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEA 58
           M  T +VE+   Q LS    ++  G +   GLLIG+ S   D   +    P P+ +  E 
Sbjct: 1   MGRTYIVEETVGQYLS---NINLQGKAFVSGLLIGQCSSQKDYVILATRTP-PKEEQSE- 55

Query: 59  ACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWAT-- 116
                  + K P +K  +         +D++W  EHA QVSRML GG+ V+G+++  T  
Sbjct: 56  -------NLKHPKAKLDN---------LDEEWATEHACQVSRMLPGGLLVLGVFIITTLE 99

Query: 117 -DSAFKNSTIELCQTVNAA---AKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNIT 172
             + F+N+   L   V  +    +     E +  ER+ +HI  S ++  CR   I    +
Sbjct: 100 LANDFQNALRRLMFAVEKSINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIHDPKS 159

Query: 173 SSCLRPCDLK-TGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANEL 231
           S+  RP D K    +  +  + +CT + ++ +P  L   S + T     + G++  A E+
Sbjct: 160 SA--RPADWKYQSGLSSSWLSLECTVHINIHIP--LSATSVSYTLEKNTKNGLTRWAKEI 215

Query: 232 RGAKAVVDGNFVVNDEPC---------------STDGLHEVELLLPLLNDTSAEACSQKD 276
                +++G   V DE C               +T    +V +L  LL ++   + +   
Sbjct: 216 ENGVYLINGQ--VKDEDCDLLEGQKKSSRGNTQATSHSFDVRVLTQLLLNSDHRSTATVQ 273

Query: 277 VV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAG 334
           +  G + L G+V   A++   +P +  A   +K DI+ ++  R +++ +++  +  P   
Sbjct: 274 ICSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADRCEMLFEDLLLNEIP--- 330

Query: 335 GGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADT-YICDYLQPSETLE 386
                  EK  S+   H L        P RVFVP    T  +CDY    E+ E
Sbjct: 331 -------EKKDSEKEFHVL--------PYRVFVPLPGSTVMLCDYKFDDESAE 368

May play a role in the trafficking of a subset of G-protein coupled receptors.

Homo sapiens (taxid: 9606)

>sp|Q5R6E9|ODR4_PONAB Protein odr-4 homolog OS=Pongo abelii GN=ODR4 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 158/359 (44%), Gaps = 56/359 (15%)

Query: 60  CSVSKD----DKKKPPSKSKSQPSDSISLVID---KDWIAEHARQVSRMLLGGIKVVGIY 112
           CS  KD      + PP + +S+    +   +D   ++W  EHA QVSRML GG+ V+G++
Sbjct: 34  CSSQKDYVILATRTPPKEEQSENLKHLKAKLDNLDEEWATEHACQVSRMLPGGLLVLGVF 93

Query: 113 VWAT---DSAFKNSTIELCQTVNAA---AKAVPILEIDSDERLLVHI-GYSPRRYTCRNC 165
           +  T    + F+N+   L   V  +    +     E +  ER+ +HI   + ++  CR  
Sbjct: 94  IITTLELANDFQNALRRLMFAVEKSINRKRLWNFTEEEVSERVTLHICASTKKKIFCRTY 153

Query: 166 TITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGI 224
            I    +S+  RP D K    +  +  + +CT + ++ +P  L   S + T     + G+
Sbjct: 154 DIHDPKSSA--RPADWKYQSGLSSSWLSLECTVHINIHIP--LSATSVSYTLEKNTKNGL 209

Query: 225 SVHANELRGAKAVVDGNFVVNDEPC--------------STDGLHEVELLLPLLNDTSAE 270
           +  A E+     +++G   V DE C              +T    +V +L  LL ++   
Sbjct: 210 TRWAKEIENGVYLINGQ--VKDEDCDLLEGQKKSRGNTQATSHSFDVRVLTQLLLNSDHR 267

Query: 271 ACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEIKGDIIMSLQSRLDVICDEVDED 328
           + +   +  G + L G+V   A++   +P +  A   +K DI+ ++  R +++ +++  +
Sbjct: 268 STATVQICSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADRCEILFEDLLLN 327

Query: 329 LAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLADT-YICDYLQPSETLE 386
             P          EK  S+   H L        P RVFVP    T  +CDY    E+ E
Sbjct: 328 EIP----------EKKDSEKEFHVL--------PYRVFVPLPGSTVMLCDYKFDDESAE 368

May play a role in the trafficking of a subset of G-protein coupled receptors.

Pongo abelii (taxid: 9601)

>sp|Q0VA36|ODR4_XENTR Protein odr-4 homolog OS=Xenopus tropicalis GN=odr4 PE=2 SV=2

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 156/397 (39%), Gaps = 79/397 (19%)

Query: 18  RLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQ 77
           +L Q   +   GLLIG+ S   D   +    P  ++ + E     SK +           
Sbjct: 17  KLIQQQKAYVTGLLIGQYSSQRDYAVLAAQTPQKEDQSEETKSGFSKLEG---------- 66

Query: 78  PSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFK---NSTIELCQTVNAA 134
                   ID +W++ HA Q+ RML GG+ V+G+++  +    K   N   +L  TV  +
Sbjct: 67  --------IDDEWVSMHASQLGRMLPGGLMVLGVFLMTSPDLSKDAQNVLRKLVFTVEKS 118

Query: 135 AKAVPILEIDSD---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLR 191
           +    +   D D   ER+ +HI  + ++ TCR   I  N   S  +P D K      +  
Sbjct: 119 SMKNRLWNFDDDDVSERVTLHICSATKKITCRTYDI--NDPKSTPKPADWKYQSSGLSWL 176

Query: 192 TFKCTYNFSLRLPIRLVGASNT-QTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCS 250
           T  C+    + +P  L  +S T Q     +R G+   A E+  +  + +G   V D+  S
Sbjct: 177 TIDCSVRVDVTIP--LTSSSLTYQERQKSIRLGLVKWAKEIEDSLVLFNGQ--VKDK--S 230

Query: 251 TDGLHE-------------------VELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFA 291
            D   E                   V    PL++ T + A  Q     L I     C   
Sbjct: 231 ADLFEEQKKSSRSSSHYSPQIITANVLTAAPLIDSTRSTALVQPCKSSLTIQGVVKCCGY 290

Query: 292 FLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDL---APTAGGGEEASNEKPVSKL 348
             + +  +  A   +K DI+ ++Q+R    C+ + ED+    P+ G   E          
Sbjct: 291 IHSNRPKVKDALQAVKRDILNTIQAR----CEMLFEDMMLNGPSKGTENEV--------- 337

Query: 349 ILHSLRKTCGLSFPRRVFVPWLADTY-ICDYLQPSET 384
                   C L  P+RVFVP    +  +CDYL   ET
Sbjct: 338 --------CPL--PQRVFVPIKGSSLKLCDYLFGDET 364

May play a role in the trafficking of a subset of G-protein coupled receptors.

Xenopus tropicalis (taxid: 8364)

>sp|A3KNB6|ODR4_XENLA Protein odr-4 homolog OS=Xenopus laevis GN=odr4 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 157/395 (39%), Gaps = 77/395 (19%)

Query: 18  RLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQ 77
           +L Q   +   GL+IG+ S   D   +    P  ++   E    +SK ++          
Sbjct: 17  KLVQQQKACITGLIIGQYSSQRDYAVLTAQTPQKEDQNEEKKPGLSKLEE---------- 66

Query: 78  PSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKA 137
                   ID +W++ HA QV RML GG+ V+G+++  T    K++   L + V A  K+
Sbjct: 67  --------IDDEWVSMHASQVGRMLPGGLMVLGVFLMTTPDLSKDAQTILRKLVFAVEKS 118

Query: 138 V---PILEIDSD---ERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLKTLR 191
                +   D D   ER+ +HI  S ++ TCR   I  N   S  +P D K    + +  
Sbjct: 119 SMKNRLWNFDEDDVSERVTLHICSSTKKITCRTYDI--NDPKSTPKPADWKYQNSVLSWL 176

Query: 192 TFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCST 251
           T  C     + +P+     S + T+ +  RQ  S+    ++  K + D   + N +    
Sbjct: 177 TVDCNVRVDVTIPL----TSPSLTYQE--RQK-SIRLGLVKWTKEIEDSVVLFNGQYKDK 229

Query: 252 DG-LHEVELLL--------------------PLLNDTSAEACSQKDVVGLLILSGSVCSF 290
           +G L E +                       PL+++T + A  Q     L I     C  
Sbjct: 230 NGDLFEEQKKSSRSSSHYSPQIITANFLNASPLIDNTRSTALVQPCKSSLTIQGVMKCRG 289

Query: 291 AFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLIL 350
              + +  +  A   IK D++ ++Q R    C+ + ED+       E  +          
Sbjct: 290 FIHSNRPKVKDAMQAIKRDLLNTIQDR----CELLFEDMMLNGPSNENDA---------- 335

Query: 351 HSLRKTCGLSFPRRVFVPWL-ADTYICDYLQPSET 384
                 C L  P+RVFVP   ++  +CDYL   ET
Sbjct: 336 ------CPL--PQRVFVPINGSNLKLCDYLFGDET 362

May play a role in the trafficking of a subset of G-protein coupled receptors.

Xenopus laevis (taxid: 8355)

>sp|Q5ZKH8|ODR4_CHICK Protein odr-4 homolog OS=Gallus gallus GN=ODR4 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 65/373 (17%)

Query: 29  GLLIGKLSPTLDRGFIFDFIPTP-QNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVID 87
           GLLIG+ SP   R +I     TP + +  E   S SK D                   ID
Sbjct: 28  GLLIGQCSP--QRDYIIRAARTPPKEEQKEGNTSPSKLDS------------------ID 67

Query: 88  KDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEI---- 143
           ++W   HA Q+SRML GG+ V+ +++ AT    K+    L + + +  K++    +    
Sbjct: 68  EEWFTAHASQISRMLPGGLLVLSVFIIATPELSKDCQNTLRKLIFSIEKSLTKRRLWKPA 127

Query: 144 --DSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVLK-TLRTFKCTYNFS 200
             D  +R  + I  + ++  CR   +     S+  +P D K    L  +  +  CT N +
Sbjct: 128 DEDVSDRAALQICSATKKIVCRTYDVQDPKGSA--KPADWKYQSALSASWLSLGCTVNVN 185

Query: 201 LRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVND------------EP 248
           + +P  L+  S         + G++  + ++  +  +++G    ND              
Sbjct: 186 IHIP--LLATSPNHDLEKNTKNGLNRWSKQIEDSIFLINGQVKDNDIELLEGQKKLRGNT 243

Query: 249 CSTDGLHEVELLLPLLNDTSAEACSQKDVV-GLLILSGSVCSFAFLTPKEP-ISQAFSEI 306
            S   + +V++L  L   +S  + +   V  G + L G+V   A++   +P + +A   +
Sbjct: 244 HSGTQIFDVKVLTQLSQGSSHRSTATVQVCSGSINLKGAVKCRAYVHNNKPKVKEAVLAL 303

Query: 307 KGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVF 366
           K DII +L  R    C+ + EDL    G        K   + + H L        P+R+F
Sbjct: 304 KRDIINTLSDR----CEILFEDLILNEGRC------KKNFERVYHVL--------PQRLF 345

Query: 367 VPWL-ADTYICDY 378
           VP+  ++  + DY
Sbjct: 346 VPFAGSNVMLSDY 358

May play a role in the trafficking of a subset of G-protein coupled receptors.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	394
359492980	492	PREDICTED: protein odr-4 homolog [Vitis	0.982	0.786	0.670	1e-145
302142107	459	unnamed protein product [Vitis vinifera]	0.982	0.843	0.670	1e-145
356507983	484	PREDICTED: protein odr-4 homolog [Glycin	0.974	0.793	0.634	1e-136
255572818	490	zinc binding dehydrogenase, putative [Ri	0.982	0.789	0.629	1e-135
356515681	488	PREDICTED: protein odr-4 homolog [Glycin	0.982	0.793	0.640	1e-132
449436928	486	PREDICTED: protein odr-4 homolog [Cucumi	0.972	0.788	0.612	1e-131
357466837	486	Odr-4-like protein [Medicago truncatula]	0.974	0.790	0.603	1e-128
18405875	491	oxidoreductase, zinc-binding dehydrogena	0.994	0.798	0.567	1e-124
297815156	486	oxidoreductase/ zinc ion binding protein	0.969	0.786	0.579	1e-122
224067098	437	predicted protein [Populus trichocarpa]	0.847	0.764	0.562	1e-113

>gi|359492980|ref|XP_002285598.2| PREDICTED: protein odr-4 homolog [Vitis vinifera]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/394 (67%), Positives = 316/394 (80%), Gaps = 7/394 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV ++ QL  AEDRLS+S + AQVGL+IGKL+ T+DRGF+FD +PTP NDAGE AC
Sbjct: 1   MVKAVVGDETQLKFAEDRLSRSAIPAQVGLVIGKLNSTIDRGFVFDLVPTPPNDAGEPAC 60

Query: 61  SVSK---DDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATD 117
           S+S+   DDKKK   K+KS    S SL+ID+DW+ EHARQVSRML+GG+KV+GIY+WA++
Sbjct: 61  SLSEAPKDDKKKKGPKTKSLHDSSSSLLIDQDWVVEHARQVSRMLVGGMKVIGIYIWASE 120

Query: 118 SAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLR 177
           S+FKNSTI LCQTV   A A  ILE D DE LL+HI YSP ++TCRNCT+TSNITSS LR
Sbjct: 121 SSFKNSTIILCQTVKGVADAASILETDRDEGLLIHICYSPMKWTCRNCTLTSNITSSSLR 180

Query: 178 PCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAV 237
           PCD K G VL +++TF+C YNF +RLPI    ASN +T +DILR GIS+HA ELRGAKA+
Sbjct: 181 PCDFKMGRVLTSIQTFRCMYNFDIRLPIYHDSASNAKTLTDILRYGISIHAKELRGAKAI 240

Query: 238 VDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKE 297
           +DG  VV DEPCS+DGLHEVELLLP + D S EACSQK+VVG+L+ SGSVCSFA L PKE
Sbjct: 241 IDGCLVVGDEPCSSDGLHEVELLLPFMKDASVEACSQKEVVGILVFSGSVCSFACLNPKE 300

Query: 298 PISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNE----KPVSKLILHSL 353
           PISQA ++IKGDIIMSLQSRLD+ICDE D D+ PT  G +EA++E    KPVS+L+LH L
Sbjct: 301 PISQALADIKGDIIMSLQSRLDIICDEADGDVGPTDDGCKEANDEISTGKPVSQLVLHLL 360

Query: 354 RKTCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           RK   LSFPRRVFVPWLA TYICDYLQP +T+EV
Sbjct: 361 RKQQCLSFPRRVFVPWLAGTYICDYLQPYDTVEV 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142107|emb|CBI19310.3| unnamed protein product [Vitis vinifera]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/394 (67%), Positives = 316/394 (80%), Gaps = 7/394 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV ++ QL  AEDRLS+S + AQVGL+IGKL+ T+DRGF+FD +PTP NDAGE AC
Sbjct: 1   MVKAVVGDETQLKFAEDRLSRSAIPAQVGLVIGKLNSTIDRGFVFDLVPTPPNDAGEPAC 60

Query: 61  SVSK---DDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATD 117
           S+S+   DDKKK   K+KS    S SL+ID+DW+ EHARQVSRML+GG+KV+GIY+WA++
Sbjct: 61  SLSEAPKDDKKKKGPKTKSLHDSSSSLLIDQDWVVEHARQVSRMLVGGMKVIGIYIWASE 120

Query: 118 SAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLR 177
           S+FKNSTI LCQTV   A A  ILE D DE LL+HI YSP ++TCRNCT+TSNITSS LR
Sbjct: 121 SSFKNSTIILCQTVKGVADAASILETDRDEGLLIHICYSPMKWTCRNCTLTSNITSSSLR 180

Query: 178 PCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAV 237
           PCD K G VL +++TF+C YNF +RLPI    ASN +T +DILR GIS+HA ELRGAKA+
Sbjct: 181 PCDFKMGRVLTSIQTFRCMYNFDIRLPIYHDSASNAKTLTDILRYGISIHAKELRGAKAI 240

Query: 238 VDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKE 297
           +DG  VV DEPCS+DGLHEVELLLP + D S EACSQK+VVG+L+ SGSVCSFA L PKE
Sbjct: 241 IDGCLVVGDEPCSSDGLHEVELLLPFMKDASVEACSQKEVVGILVFSGSVCSFACLNPKE 300

Query: 298 PISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNE----KPVSKLILHSL 353
           PISQA ++IKGDIIMSLQSRLD+ICDE D D+ PT  G +EA++E    KPVS+L+LH L
Sbjct: 301 PISQALADIKGDIIMSLQSRLDIICDEADGDVGPTDDGCKEANDEISTGKPVSQLVLHLL 360

Query: 354 RKTCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           RK   LSFPRRVFVPWLA TYICDYLQP +T+EV
Sbjct: 361 RKQQCLSFPRRVFVPWLAGTYICDYLQPYDTVEV 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507983|ref|XP_003522742.1| PREDICTED: protein odr-4 homolog [Glycine max]

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/391 (63%), Positives = 296/391 (75%), Gaps = 7/391 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           M   V+ E+ +L  AE  LSQS + ++VGLLIGK S +L R F+FD IPTP ND+ E AC
Sbjct: 1   MAKGVIGEETRLKLAEGLLSQSAVPSEVGLLIGKFSSSLGRAFLFDLIPTPHNDSAEPAC 60

Query: 61  SVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAF 120
           +++  DKKK    +KS P+DS SL IDKDW+AEHARQVSRML+GGIKVVG+YVW +D+AF
Sbjct: 61  ALTDPDKKK---ATKSNPADSSSLFIDKDWVAEHARQVSRMLVGGIKVVGLYVWVSDAAF 117

Query: 121 KNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCD 180
           KNSTI LCQTV   A+A P+LE D DERLL+HI YSPRR+ CRNC+++SNITSS LRPCD
Sbjct: 118 KNSTIMLCQTVKGVAEAAPVLEGDWDERLLLHISYSPRRWNCRNCSLSSNITSSSLRPCD 177

Query: 181 LKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDG 240
            K G VL +L+TFKC +NF+LRLPI    AS  QT SD+LR  IS+HA EL GAKA++DG
Sbjct: 178 FKMGKVLTSLQTFKCMHNFNLRLPILRDSASKFQTLSDVLRHTISIHAKELAGAKALIDG 237

Query: 241 NFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPIS 300
             VV  E  S+DG+HEVELLL  LND+S EACSQ DVVG+L  SG +CSFA+L  KEP S
Sbjct: 238 KLVVESESYSSDGVHEVELLLSFLNDSSIEACSQGDVVGILSFSGLICSFAYLNSKEPNS 297

Query: 301 QAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASN----EKPVSKLILHSLRKT 356
           QA ++IKGDII SLQSRLD+ICDEVD D       G + SN    EKPV +L+LH LRK 
Sbjct: 298 QAITDIKGDIITSLQSRLDIICDEVDVDSGNNHDVGSQVSNEISAEKPVPQLVLHLLRKG 357

Query: 357 CGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           C L FPRRVF PWLA  Y+CDYLQPSET+EV
Sbjct: 358 CSLPFPRRVFAPWLAGVYVCDYLQPSETVEV 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572818|ref|XP_002527341.1| zinc binding dehydrogenase, putative [Ricinus communis] gi|223533260|gb|EEF35013.1| zinc binding dehydrogenase, putative [Ricinus communis]

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/394 (62%), Positives = 300/394 (76%), Gaps = 7/394 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV ++ QL   ++RLSQSGL++QVGL+IGKLS  LDRGF++D +PTP NDAGE AC
Sbjct: 1   MVKAVVGDETQLNLVQNRLSQSGLTSQVGLVIGKLSSALDRGFVYDLVPTPSNDAGEPAC 60

Query: 61  SV---SKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATD 117
           S+    KDDKKK  SKSKSQ +DS +L IDKDW++EHARQVSRMLLGG+KV+GIYVW +D
Sbjct: 61  SIIDTFKDDKKKGSSKSKSQIADSSTLAIDKDWVSEHARQVSRMLLGGMKVIGIYVWVSD 120

Query: 118 SAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLR 177
           ++FKNSTI L QTV   A+A PI   D DERLL+HI YSP R+TCRNC + SNIT+S +R
Sbjct: 121 ASFKNSTITLSQTVKGVAEAAPISATDWDERLLIHICYSPMRWTCRNCVLASNITASSIR 180

Query: 178 PCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAV 237
           PCD K G VL +LRTF+CTYNF L LPI    ASN+   S IL  GIS+HA  L  A+A+
Sbjct: 181 PCDFKMGRVLSSLRTFRCTYNFELSLPICRENASNSSMLSAILHHGISIHAKVLNSARAL 240

Query: 238 VDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKE 297
           +DGN VVN+E   T+GLHEVELLLP + +T  EACS KDV+G+L+ SGSVCSFA+   KE
Sbjct: 241 IDGNLVVNEESSVTEGLHEVELLLPFMKNTLGEACSNKDVIGVLMFSGSVCSFAYSNSKE 300

Query: 298 PISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASN----EKPVSKLILHSL 353
            ISQA ++IK DII SLQSRLD+ICD+ DEDL P     ++AS     EKPVS+L+L  L
Sbjct: 301 SISQAVADIKDDIIRSLQSRLDIICDQADEDLGPMDNDVQDASQGKTPEKPVSRLVLRLL 360

Query: 354 RKTCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           R TC L+FPRRVF+PW   T+ICDYLQPSE LEV
Sbjct: 361 RDTCSLAFPRRVFIPWSGGTFICDYLQPSERLEV 394

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515681|ref|XP_003526527.1| PREDICTED: protein odr-4 homolog [Glycine max]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/392 (64%), Positives = 297/392 (75%), Gaps = 5/392 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           M   VV E+ +L  AEDRLSQS + ++VGLLIGK S  L R F+FD IPTP ND+GE AC
Sbjct: 1   MAKAVVGEETRLKLAEDRLSQSAVPSEVGLLIGKFSSALGRAFLFDLIPTPHNDSGEPAC 60

Query: 61  SVSK-DDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSA 119
           S+++ D KK P SKSKS+ +DS SL IDKDW+AEH RQVSRML+GGIKVVG+YVW +D+A
Sbjct: 61  SLTEPDKKKGPKSKSKSELADSSSLFIDKDWVAEHVRQVSRMLVGGIKVVGLYVWVSDAA 120

Query: 120 FKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPC 179
           FKNSTI LCQTV   A A P L+ + DERLL+HI YSPRR+ CRNC+++SNITSS LRPC
Sbjct: 121 FKNSTIMLCQTVKGVADAAPGLDGNWDERLLLHISYSPRRWNCRNCSLSSNITSSSLRPC 180

Query: 180 DLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVD 239
           D K G VL +L+TFKC +NF+LRLPI    AS  QT SD+LR  IS+HA EL GAKA++D
Sbjct: 181 DFKMGKVLTSLQTFKCMHNFNLRLPILRDSASKFQTLSDVLRHAISIHAKELAGAKALID 240

Query: 240 GNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPI 299
           G  VV  E  S+DG+HEVELLL  LND+S EACSQ DVVG+L  SG +CSFA+L  KEPI
Sbjct: 241 GKLVVESESYSSDGVHEVELLLSFLNDSSIEACSQGDVVGILSFSGLICSFAYLNSKEPI 300

Query: 300 SQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGG----EEASNEKPVSKLILHSLRK 355
           SQA ++IKGDII SLQSRLD+ICDEVD D       G    +E S E PV +L+LH LRK
Sbjct: 301 SQAITDIKGDIITSLQSRLDIICDEVDADSGNNHDVGSQVSDELSAETPVPQLVLHLLRK 360

Query: 356 TCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
            C L FPRRVF PWLA  Y+CDYLQP ET+EV
Sbjct: 361 GCSLPFPRRVFAPWLAVVYVCDYLQPFETVEV 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436928|ref|XP_004136244.1| PREDICTED: protein odr-4 homolog [Cucumis sativus] gi|449502792|ref|XP_004161744.1| PREDICTED: protein odr-4 homolog [Cucumis sativus]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/392 (61%), Positives = 290/392 (73%), Gaps = 9/392 (2%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV TVV E+ +L   EDRL+QS + +++GL+IG+LS  LDRGF+FD +PTP NDAGEAAC
Sbjct: 1   MVKTVVGEESRLKIVEDRLAQSAIPSEIGLVIGRLSSPLDRGFVFDLVPTPLNDAGEAAC 60

Query: 61  S-VSKDDKKKPPSKSKSQPS-DSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDS 118
           S V      K        P+ DS SLVIDKDW+AEHARQV RML GG+KV+GIYVWA++ 
Sbjct: 61  SLVGAIKDDKKKGSKGKSPAVDSSSLVIDKDWVAEHARQVRRMLPGGVKVIGIYVWASEM 120

Query: 119 AFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRP 178
           A KNST+ LCQTV   A+A P+   D +ERLLVHI YSPRR+TC+N  +TSNITS+ LRP
Sbjct: 121 AVKNSTLMLCQTVKTVAEAAPV--NDLEERLLVHICYSPRRWTCKNFFLTSNITSNSLRP 178

Query: 179 CDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVV 238
           CD K G VL +L+TFKC +NF +R+P+    ASNTQ   D++R  IS+ A+ L+GAKAVV
Sbjct: 179 CDFKMGRVLTSLQTFKCMFNFDMRIPVW--RASNTQRLIDVIRNEISIQADVLKGAKAVV 236

Query: 239 DGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEP 298
           DGN VV+D+P     LHE+ELLLP L +TS E  SQKDV G+++  GSVCSFA+L  KEP
Sbjct: 237 DGNLVVSDDPSIVGDLHEIELLLPFLKNTSFEVSSQKDVDGIMVFRGSVCSFAYLNSKEP 296

Query: 299 ISQAFSEIKGDIIMSLQSRLDVICDEVDEDL---APTAGGGEEASNEKPVSKLILHSLRK 355
           IS+A  EIKGDII SLQSRLD+ICDEVD D            E ++E+ VS+L LHSLRK
Sbjct: 297 ISEAVREIKGDIITSLQSRLDIICDEVDADKDVSNDVHKDANEVASEQHVSQLFLHSLRK 356

Query: 356 TCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
            C LSFPRRVFVPWLAD YICDYLQPSET EV
Sbjct: 357 KCDLSFPRRVFVPWLADIYICDYLQPSETTEV 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466837|ref|XP_003603703.1| Odr-4-like protein [Medicago truncatula] gi|355492751|gb|AES73954.1| Odr-4-like protein [Medicago truncatula]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/393 (60%), Positives = 293/393 (74%), Gaps = 9/393 (2%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV E+ +  S EDRL++S   A+VGLLIGK S  LDR F+FD IPTP ND+ E A 
Sbjct: 1   MVKGVVGEETRFQSVEDRLTKSSSPAEVGLLIGKFSSALDRVFLFDLIPTPPNDSAEPAS 60

Query: 61  SVSKDDKK-KPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSA 119
           S+ + DKK    SKS++QP DS SL IDKDW++EHARQVSRML+GGIKVVG+YVW  D+A
Sbjct: 61  SIIQPDKKLASKSKSQTQP-DSSSLFIDKDWVSEHARQVSRMLVGGIKVVGVYVWVNDNA 119

Query: 120 FKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPC 179
           FKNST+ L  TV   A+A P+ +++ DERLL+ I Y PRR+ CRNC+++SNITSS LRPC
Sbjct: 120 FKNSTLML--TVKGVAEAAPVSDVNWDERLLLQICYGPRRWNCRNCSLSSNITSSSLRPC 177

Query: 180 DLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVD 239
           D K G VL + +TF+C +NF+LRLPI   G+S  QT SD+L   IS+HA EL  AKA++D
Sbjct: 178 DFKMGKVLSSFQTFRCMHNFNLRLPILRDGSSKFQTLSDVLHHAISLHAKELADAKALID 237

Query: 240 GNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPI 299
           G  V+++EPCS DG+HEVELL+P LN+ S EA SQ+DV G+L   G++CSFA+L  KEPI
Sbjct: 238 GKLVLDNEPCSLDGVHEVELLIPFLNNGSIEAYSQRDVSGILSFGGAICSFAYLNSKEPI 297

Query: 300 SQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGG-----EEASNEKPVSKLILHSLR 354
           SQA ++IKGDII SLQSRLD+ICDE D D       G     ++ S EKPVS+L+LH LR
Sbjct: 298 SQAVTDIKGDIITSLQSRLDIICDETDVDSGNHHDVGKQVNEDDVSVEKPVSQLVLHLLR 357

Query: 355 KTCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           K C L FPRRVF PWLA TY CDYLQPSET+EV
Sbjct: 358 KECSLPFPRRVFAPWLAGTYACDYLQPSETVEV 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18405875|ref|NP_566839.1| oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] gi|15983368|gb|AAL11552.1|AF424558_1 AT3g28670/MZN14_13 [Arabidopsis thaliana] gi|20260470|gb|AAM13133.1| unknown protein [Arabidopsis thaliana] gi|34365729|gb|AAQ65176.1| At3g28670 [Arabidopsis thaliana] gi|332643951|gb|AEE77472.1| oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/398 (56%), Positives = 288/398 (72%), Gaps = 6/398 (1%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV E  +L S EDRLS S + A+VGL+IGKLS  LDRGF+FD IPTP ND GE AC
Sbjct: 1   MVKAVVGEDTRLTSVEDRLSHSAIPAEVGLVIGKLSSVLDRGFVFDLIPTPSNDDGEPAC 60

Query: 61  SV--SKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDS 118
           +V  +KDDK+KP          S   +   DW+AEHARQVSRMLLGG+KVVGIYVWA+D 
Sbjct: 61  AVLETKDDKRKPSKSKSQSSESSSLSID-SDWVAEHARQVSRMLLGGMKVVGIYVWASDI 119

Query: 119 AFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRP 178
           AFKNST+ LCQ + A + A+  L+   +E LL+HI YSPRR+ CR C ++S+ITSS LRP
Sbjct: 120 AFKNSTMILCQAMKAVSDAIRHLDPSLNEALLIHICYSPRRWNCRTCLLSSSITSSNLRP 179

Query: 179 CDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVV 238
           CD K G VL +L+ F+C+YNFS RLPI   G S+ QTF+D +R+ +++HA EL  A A++
Sbjct: 180 CDFKLGKVLSSLQRFRCSYNFSFRLPIYGEGGSSAQTFTDTIRKELAIHAKELNSANAMI 239

Query: 239 DGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEP 298
           DG+ V NDEPC+TDG HE+ELL P + DT AEA + K+V G+L+ +GSV S+A+L  KEP
Sbjct: 240 DGDLVHNDEPCNTDGEHEIELLFPFMKDTRAEASTAKNVTGILLFTGSVFSYAYLNVKEP 299

Query: 299 ISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASN---EKPVSKLILHSLRK 355
           +SQA ++IK DII SLQSRLD+ICDE ++DL PT  G  E ++   + P+SKLIL+S  K
Sbjct: 300 VSQAIADIKADIIRSLQSRLDIICDESEQDLNPTDVGDNENADGMSKIPISKLILNSSIK 359

Query: 356 TCGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTI 393
            C L  PRRV VPWL+  +ICDYLQP E+LEV   + I
Sbjct: 360 ACHLRLPRRVLVPWLSGMFICDYLQPFESLEVVKERCI 397

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297815156|ref|XP_002875461.1| oxidoreductase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata] gi|297321299|gb|EFH51720.1| oxidoreductase/ zinc ion binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/392 (57%), Positives = 287/392 (73%), Gaps = 10/392 (2%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  VV E  +L S EDRLS S + A+VGL+IGKLS  LDRGF+FD IPTP ND GE AC
Sbjct: 1   MVKAVVGEDTRLTSVEDRLSHSAIPAEVGLVIGKLSSVLDRGFVFDLIPTPSNDDGEPAC 60

Query: 61  SV--SKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDS 118
           SV  +KD K+KP   S+S      S     DW+AEHARQVSRMLLGG+KVVGIYVWA+D+
Sbjct: 61  SVLETKDVKRKPSKSSESSSLSIDS-----DWVAEHARQVSRMLLGGMKVVGIYVWASDT 115

Query: 119 AFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRP 178
           +FKNST+ LCQ + A + A+  L+   +E LL+HI YSPRR+ CR C ++S+ITSS LRP
Sbjct: 116 SFKNSTMILCQAIKAVSDAIRHLDPSLNEALLIHICYSPRRWNCRTCLLSSSITSSSLRP 175

Query: 179 CDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVV 238
           CD K G VL +L+ F+C+Y F+ RLPI   G S+TQTF+D LR+ +++HA EL  A A++
Sbjct: 176 CDFKLGKVLSSLQRFRCSYRFNFRLPIYGEGGSSTQTFTDTLRKELAIHAKELNTANAMI 235

Query: 239 DGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEP 298
           DG+ V NDEPC++DG HE+ELL P + D+ AEA + K+V G+L+ SGSV S+A+L  KEP
Sbjct: 236 DGDLVHNDEPCNSDGEHEIELLFPFMKDSRAEASTAKNVTGILLFSGSVFSYAYLNVKEP 295

Query: 299 ISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEK---PVSKLILHSLRK 355
           +SQA ++IK DII SLQSRLD+ICDE ++DL PT  G    ++E    P+SKLIL+S  K
Sbjct: 296 VSQAIADIKADIIRSLQSRLDIICDESEQDLNPTDVGDNGDADEMSKIPISKLILNSSTK 355

Query: 356 TCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
            C L  PRRV VPWLA  YICDYLQP E+LEV
Sbjct: 356 ACHLRLPRRVLVPWLAGMYICDYLQPFESLEV 387

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067098|ref|XP_002302354.1| predicted protein [Populus trichocarpa] gi|222844080|gb|EEE81627.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/395 (56%), Positives = 269/395 (68%), Gaps = 61/395 (15%)

Query: 1   MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
           MV  V+ ++ QL SAEDRLSQSGL++QVGL+IGKLS  LDRGFIFD +PTP NDAGE+AC
Sbjct: 1   MVKAVIGDETQLTSAEDRLSQSGLTSQVGLVIGKLSSKLDRGFIFDLVPTPPNDAGESAC 60

Query: 61  SV---SKDDKKKPPSKSKSQPS-DSISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWAT 116
           S+   +KDD K+   KSKSQP+ DS +L ID DW+AEHARQVSRML+GG+KV+G+YVW +
Sbjct: 61  SLLETTKDDNKRKGFKSKSQPAVDSSALNIDSDWVAEHARQVSRMLVGGMKVIGVYVWVS 120

Query: 117 DSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCL 176
           DSAFKNSTI L QTV   A+A P+ E D DERLL+HI YSPRR+TCRNC ++SNITSS +
Sbjct: 121 DSAFKNSTITLFQTVKGVAEAAPVTETDWDERLLIHICYSPRRWTCRNCVLSSNITSSSI 180

Query: 177 RPCDLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKA 236
           RPCD K G VL +L+ F+CTYNF LR           Q FS +                 
Sbjct: 181 RPCDFKMGRVLSSLQAFRCTYNFKLRY---------LQWFSYV----------------- 214

Query: 237 VVDGNFVVNDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPK 296
                       CS  G               ++  SQKDV G+L+  GSVCS+A+   K
Sbjct: 215 ------------CSVCG---------------SKQHSQKDVAGVLVFGGSVCSYAYSNSK 247

Query: 297 EPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGE----EASNEKPVSKLILHS 352
           EP+ QA ++IK DII SLQSRLD+ICDE DED  P    G+    E   EKPVS+L+L+S
Sbjct: 248 EPVMQAVADIKDDIIRSLQSRLDIICDEADEDPDPIDIDGKDSRVEKLPEKPVSRLVLNS 307

Query: 353 LRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEV 387
           LR+TC LSFPRRVFVPWLA T+ICDYLQPSET+EV
Sbjct: 308 LRRTCFLSFPRRVFVPWLAGTFICDYLQPSETVEV 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	394
TAIR|locus:2095497	491	AT3G28670 [Arabidopsis thalian	0.997	0.800	0.556	1.4e-112
MGI|MGI:2385108	447	BC003331 "cDNA sequence BC0033	0.715	0.630	0.253	5.8e-12
ZFIN|ZDB-GENE-080502-1	451	c1orf27 "c1orf27 homolog (H. s	0.705	0.616	0.267	9.9e-12
UNIPROTKB|Q5SWX8	454	ODR4 "Protein odr-4 homolog" [	0.718	0.623	0.265	4.9e-11
UNIPROTKB|F1N582	454	C16H1orf27 "Uncharacterized pr	0.718	0.623	0.253	3e-10
RGD|1307830	415	RGD1307830 "similar to cDNA se	0.319	0.303	0.288	4.1e-10
UNIPROTKB|E2QSA1	455	C1orf27 "Uncharacterized prote	0.718	0.621	0.253	6.6e-10
UNIPROTKB|F1S2Z9	454	C1orf27 "Uncharacterized prote	0.718	0.623	0.246	1.1e-09
DICTYBASE|DDB_G0283829	456	DDB_G0283829 "ODR-4 family pro	0.804	0.695	0.232	1.9e-09
UNIPROTKB|F6UTU8	456	C1orf27 "Uncharacterized prote	0.718	0.620	0.252	6.8e-09

TAIR|locus:2095497 AT3G28670 [Arabidopsis thaliana (taxid:3702)]

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 221/397 (55%), Positives = 278/397 (70%)

Query:     1 MVNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAAC 60
             MV  VV E  +L S EDRLS S + A+VGL+IGKLS  LDRGF+FD IPTP ND GE AC
Sbjct:     1 MVKAVVGEDTRLTSVEDRLSHSAIPAEVGLVIGKLSSVLDRGFVFDLIPTPSNDDGEPAC 60

Query:    61 SVXXXXXXXXX-XXXXXXXXXXISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSA 119
             +V                     SL ID DW+AEHARQVSRMLLGG+KVVGIYVWA+D A
Sbjct:    61 AVLETKDDKRKPSKSKSQSSESSSLSIDSDWVAEHARQVSRMLLGGMKVVGIYVWASDIA 120

Query:   120 FKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPC 179
             FKNST+ LCQ + A + A+  L+   +E LL+HI YSPRR+ CR C ++S+ITSS LRPC
Sbjct:   121 FKNSTMILCQAMKAVSDAIRHLDPSLNEALLIHICYSPRRWNCRTCLLSSSITSSNLRPC 180

Query:   180 DLKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVD 239
             D K G VL +L+ F+C+YNFS RLPI   G S+ QTF+D +R+ +++HA EL  A A++D
Sbjct:   181 DFKLGKVLSSLQRFRCSYNFSFRLPIYGEGGSSAQTFTDTIRKELAIHAKELNSANAMID 240

Query:   240 GNFVVNDEPCSTDGLHEVEXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPI 299
             G+ V NDEPC+TDG HE+E       DT AEA + K+V G+L+ +GSV S+A+L  KEP+
Sbjct:   241 GDLVHNDEPCNTDGEHEIELLFPFMKDTRAEASTAKNVTGILLFTGSVFSYAYLNVKEPV 300

Query:   300 SQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPT-AGGGEEAS--NEKPVSKLILHSLRKT 356
             SQA ++IK DII SLQSRLD+ICDE ++DL PT  G  E A   ++ P+SKLIL+S  K 
Sbjct:   301 SQAIADIKADIIRSLQSRLDIICDESEQDLNPTDVGDNENADGMSKIPISKLILNSSIKA 360

Query:   357 CGLSFPRRVFVPWLADTYICDYLQPSETLEVCISKTI 393
             C L  PRRV VPWL+  +ICDYLQP E+LEV   + I
Sbjct:   361 CHLRLPRRVLVPWLSGMFICDYLQPFESLEVVKERCI 397

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:2385108 BC003331 "cDNA sequence BC003331" [Mus musculus (taxid:10090)]

 Score = 188 (71.2 bits), Expect = 5.8e-12, P = 5.8e-12
 Identities = 80/315 (25%), Positives = 141/315 (44%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWAT-DSA--FKNSTIELCQTVNAAAKAVPILE 142
             +D++W  EHA QVSRML GG+ V+GI++  T + A  F+N+   L  ++  +     + +
Sbjct:    67 LDEEWATEHASQVSRMLPGGLVVLGIFIITTLELADDFQNALRRLIFSMEKSMSRKRLWD 126

Query:   143 IDSDE---RLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYN 198
             +  DE   R+ +HI  S ++ +CR   +    +S+  RP D K    V  +  +  CT +
Sbjct:   127 VTEDEVSERVTLHICSSTKKISCRTYDVQDPKSSA--RPADWKYQSRVSASWLSLDCTVH 184

Query:   199 FSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEVE 258
              ++ +P+     S   T     + G++      R AK + +G +++N +    D    +E
Sbjct:   185 VNIHIPLSATSVS--YTLEKNTKSGLT------RWAKQIENGVYLINGQVKGND-CDLLE 235

Query:   259 XXXXXXNDTSAEACS-QKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----IM 312
                    +T A A S    V+  L+L+    S A +     I      ++G++     I 
Sbjct:   236 GQKKSRGNTQATAHSFDVRVLTQLLLNSDHRSTATVQ----ICSGSVNLRGNVKCRAYIH 291

Query:   313 SLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLAD 372
             S + ++      V  D+  T     E   E     L+L+ + +      P+RVFVP    
Sbjct:   292 SNRPKVKDAVQAVKRDILNTVADRCEILFED----LLLNEIPEKKNYELPQRVFVPLPGS 347

Query:   373 TY-ICDYLQPSETLE 386
             T  +CDY    E+ E
Sbjct:   348 TVMLCDYKFGDESAE 362

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-080502-1 c1orf27 "c1orf27 homolog (H. sapiens)" [Danio rerio (taxid:7955)]

 Score = 186 (70.5 bits), Expect = 9.9e-12, P = 9.9e-12
 Identities = 86/322 (26%), Positives = 142/322 (44%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVP------ 139
             ID  W+ EHA+QVSRML GG+ ++G+++       K++   L + + A  K +       
Sbjct:    68 IDVAWLTEHAKQVSRMLPGGLCILGLFIVTPPELSKDANNTLKRLLFAMDKYITKGRLWD 127

Query:   140 ILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCTY 197
             + E D  ER+ +HI    ++  C+   +    +S+  +P D K  TG V        C+ 
Sbjct:   128 LSEEDVTERVTLHICSKTKKAVCKTFDVKDPKSSA--KPADWKYQTG-VSSPWPMLTCSV 184

Query:   198 NFSLRLPIRLVGAS--NTQT-FSD-ILRQGISVHANE--LRGAKAVVDGN-FVVNDEPCS 250
                L++P  L+G+S  N +T   D ++R    + A    + G +A+ D   F+   +   
Sbjct:   185 EVDLQIP--LIGSSSNNIETCMKDGLMRWAKQIEAGYCLISGRQALDDTELFIGQKKNPK 242

Query:   251 TDGLHEVEXXXXXXNDTSAEACSQKDVV--GLLILSGSVCSFAFLTPKEPISQ-AFSEIK 307
             T     +       N    E CS    V  G + + G V   A++   +P ++ A   IK
Sbjct:   243 TSHRQILPVRILVSNVNVDERCSAVVQVCSGSMRVRGVVHCRAYINSNKPKARHAVQAIK 302

Query:   308 GDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPRRVFV 367
              DII ++ SR+++      EDL  + G                H    T   + PRRVF 
Sbjct:   303 RDIINTVSSRVEMFL----EDLLMSEGS---------------HKGLSTGQQALPRRVFA 343

Query:   368 PW-LADTYICDYLQPSE-TLEV 387
             P   +   +CDY+ P E T +V
Sbjct:   344 PMPFSSLSVCDYMFPDENTADV 365

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q5SWX8 ODR4 "Protein odr-4 homolog" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 4.9e-11, P = 4.9e-11
 Identities = 85/320 (26%), Positives = 138/320 (43%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWAT-DSA--FKNSTIELCQTVNAAAKAVPI-- 140
             +D++W  EHA QVSRML GG+ V+G+++  T + A  F+N+   L   V  +     +  
Sbjct:    67 LDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQNALRRLMFAVEKSINRKRLWN 126

Query:   141 -LEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCTY 197
               E +  ER+ +HI  S ++  CR   I    +S+  RP D K  +GL    L + +CT 
Sbjct:   127 FTEEEVSERVTLHICASTKKIFCRTYDIHDPKSSA--RPADWKYQSGLSSSWL-SLECTV 183

Query:   198 NFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEV 257
             + ++ +P+     S   T     + G++  A E+     +++G   V DE C    L E 
Sbjct:   184 HINIHIPLSATSVS--YTLEKNTKNGLTRWAKEIENGVYLINGQ--VKDEDCD---LLEG 236

Query:   258 EXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----IM 312
             +      N  +        V+  L+L+    S A +     I      +KG +     I 
Sbjct:   237 QKKSSRGNTQATSHSFDVRVLTQLLLNSDHRSTATVQ----ICSGSVNLKGAVKCRAYIH 292

Query:   313 SLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSL--RKTCGLSF---PRRVFV 367
             S + ++      V  D+  T     E   E     L+L+ +  +K     F   P RVFV
Sbjct:   293 SSKPKVKDAVQAVKRDILNTVADRCEMLFED----LLLNEIPEKKDSEKEFHVLPYRVFV 348

Query:   368 PWLADTY-ICDYLQPSETLE 386
             P    T  +CDY    E+ E
Sbjct:   349 PLPGSTVMLCDYKFDDESAE 368

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1N582 C16H1orf27 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 173 (66.0 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 81/320 (25%), Positives = 135/320 (42%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWAT---DSAFKNSTIELCQTVNAAAKAVPI-- 140
             +D++W  EHA QVSRML GG+ V+G+++       S F+N+   L   V  +     +  
Sbjct:    67 LDEEWATEHAHQVSRMLPGGLLVLGVFIITALEMGSEFQNTLRRLVFAVEKSVNKKRLWN 126

Query:   141 -LEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCTY 197
               E +  ER+++H   S ++  CR   I    +S+  +P D K   GL    L + +CT 
Sbjct:   127 FTEEEVSERVILHFCSSTKKIFCRTYDIHDPKSSA--KPADWKYQNGLSASWL-SLECTV 183

Query:   198 NFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEV 257
               ++ +P+     S   T     + G++  A ++     +++G   V DE C    L E 
Sbjct:   184 YINIHVPLSTTSVS--YTLEKNTKNGLARWAKQIENGIYLINGQ--VKDEDCD---LLEG 236

Query:   258 EXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----IM 312
             +      N  +A       V+  L+L+    S A +     I      +KG +     I 
Sbjct:   237 QKKSSRGNTQAANHSFDIRVLTQLLLNSDHRSTAMVQ----ICSGSVNLKGAVKCRAYIH 292

Query:   313 SLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSL--RKTCGLSF---PRRVFV 367
             S + ++      +  D+  T     E   E     L+L+ +  +K     F   P RVFV
Sbjct:   293 SNKPKVKDAVQAMKRDILNTVADRCEILFED----LLLNEIPEKKDSEKEFHILPHRVFV 348

Query:   368 PWLADTY-ICDYLQPSETLE 386
             P    T  +CDY    E+ E
Sbjct:   349 PIPGSTVMLCDYKFGDESAE 368

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1307830 RGD1307830 "similar to cDNA sequence BC003331" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
 Identities = 39/135 (28%), Positives = 69/135 (51%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWAT-DSA--FKNSTIELCQTVNAAAKAVPILE 142
             +D++W  EHA QVSRML GG+ V+G+++  T + A  F+N+   L  ++  +     +  
Sbjct:    67 LDEEWATEHANQVSRMLPGGLVVLGVFIITTLELADDFQNAMRRLIFSMEKSMSRKRLWN 126

Query:   143 IDSDE---RLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK-TGLVLKTLRTFKCTYN 198
             +  DE   R+ +HI  S ++ +CR  T   +   S  RP D K    V  +  +  CT +
Sbjct:   127 VTEDEVSERVTLHICSSTKKISCR--TYDVHDPKSSARPADWKYQSRVSASWLSLDCTIH 184

Query:   199 FSLRLPIRLVGASNT 213
              ++ +P+     + T
Sbjct:   185 VNIHIPLSATSVTYT 199

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|E2QSA1 C1orf27 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 170 (64.9 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 81/320 (25%), Positives = 134/320 (41%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVP------ 139
             +D++W  EHA QVSRML GG+ V+G+++  T     +    L + + A  K++       
Sbjct:    68 LDEEWTTEHANQVSRMLPGGLLVLGVFIITTLEMGNDCQNALRRLIFAMEKSLSKRRLWN 127

Query:   140 ILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCTY 197
               E +  ER+ +HI  S ++  CR   I    +S+  +P D K   GL    L   +CT 
Sbjct:   128 FTEEEVSERVTLHICSSTKKIVCRTYDIRDPKSSA--KPADWKYQNGLSTSWL-PLECTV 184

Query:   198 NFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEV 257
             + ++ +P+     S   T     + G+   A ++     +++G   V DE C    L E 
Sbjct:   185 HVNIHIPLSTTSVS--YTLEKNTKNGLIRWAKQIENGVYLINGQ--VKDEDCD---LLEG 237

Query:   258 EXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----IM 312
             +      N  +A       V+  LIL+    S A +     I      +KG +     + 
Sbjct:   238 QKKSSRGNVQAASHSFDVKVLTQLILNSDHRSTATVQ----ICSGSVNLKGAVKCRAYVH 293

Query:   313 SLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSL--RKTCGLSF---PRRVFV 367
             S + ++      +  D+  T     E   E     L+L+ +  +K     F   P RVFV
Sbjct:   294 SNKPKVKDAVQAMKRDILNTVADRCEMLFED----LLLNEIPEKKDSEKEFHILPHRVFV 349

Query:   368 PWLADTY-ICDYLQPSETLE 386
             P    T  +CDY    E+ E
Sbjct:   350 PIPGSTVMLCDYKFGDESAE 369

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1S2Z9 C1orf27 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 79/320 (24%), Positives = 134/320 (41%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWAT---DSAFKNSTIELCQTVNAAAKAVPI-- 140
             +D++W  EHA QVSRML GG+ V+G+++  T    + F+N+   L   V  +     +  
Sbjct:    67 LDEEWATEHANQVSRMLPGGLLVLGVFIVTTLEMGNEFQNTLRRLVFAVEKSLNKKRLWN 126

Query:   141 -LEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCTY 197
               E +  ER+ +HI  S ++  CR   I    +S+  +P D K   GL    L + +CT 
Sbjct:   127 FTEEEVSERVTLHICSSTKKILCRTYDIHDPKSSA--KPADWKYQNGLSASWL-SLECTV 183

Query:   198 NFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHEV 257
               ++ +P+     S   T     + G++  A ++     +++G   V DE C    L E 
Sbjct:   184 YINIHVPLSATSVS--YTLEKNTKNGLARWAKQIENGVYLINGQ--VKDEDCE---LLEG 236

Query:   258 EXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----IM 312
             +      N  +        V+  L+L+    S A +     I      +KG +     + 
Sbjct:   237 QKKSSRGNTQATNHSFDVRVLTQLVLNSDHRSTATVQ----ICSGSVNLKGAVKCRAYVH 292

Query:   313 SLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSL--RKTCGLSF---PRRVFV 367
             S + ++      +  D+  T     E   E     L+L+ +  +K     F   P RVFV
Sbjct:   293 SNKPKVKDAVQAMKRDILNTVADRCEILFED----LVLNEIPEKKDSEKEFHILPHRVFV 348

Query:   368 PWLADTY-ICDYLQPSETLE 386
             P       +CDY    E+ E
Sbjct:   349 PIPGSAVMLCDYKFGDESAE 368

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0283829 DDB_G0283829 "ODR-4 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 80/344 (23%), Positives = 147/344 (42%)

Query:     9 KPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRG-FIFDFIPTPQNDAGEAACSVXXXXX 67
             K  L    ++L QS +  ++GLLIG+ S   ++  F+    PTP N +            
Sbjct:     8 KITLEERSNKLEQSHI--EIGLLIGQESEISEQQTFVLGLFPTPLNISN----------- 54

Query:    68 XXXXXXXXXXXXXXISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIEL 127
                           IS  IDK+WI E+  QV+ ML GGI +VGIY+   DS     T+  
Sbjct:    55 TDDDNNNKPINIDSISS-IDKEWILEYCHQVNIMLYGGIDIVGIYMIIPDS----DTLNE 109

Query:   128 CQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRPCDLKTGLVL 187
                 +   K +  +    + + L  I YS ++    N   T++     L+  ++K   V+
Sbjct:   110 KNNESFIMKLLKSIHTIINSKSLQFISYS-KKTGLINGKATNSTQLYRLKSTEIK---VI 165

Query:   188 KTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANEL-RGAKAVVDGNFVVND 246
               L     + +  L + I+L   +   +F ++ +  I +  N+L + +  +++  FV  +
Sbjct:   166 NNLENEFLSLHCILPIDIKLKSKNGMISFENLKKDIIEIFENQLFKESTLLIENEFVSGN 225

Query:   247 EPCSTDGLHEVEXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEI 306
             E  S     + +       +   ++ S   +      + +    A++   E I  AF  I
Sbjct:   226 EIISQQFKSKSKLNIDLLIN-QLDSISTSSLEFNFNNNNNTHCIAYIHQLEQIKTAFKFI 284

Query:   307 KGDIIMSLQSRLDVICDEVDEDLAPTAGGGE--EASNEKPVSKL 348
             K DII S++SR D++ +E+  +        +  + S E P+ +L
Sbjct:   285 KKDIIKSVESRFDLLFNEISSNNNNNDNDQDNIKLSKESPILEL 328

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F6UTU8 C1orf27 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
 Identities = 81/321 (25%), Positives = 134/321 (41%)

Query:    86 IDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVP------ 139
             +D++W  EHA QVSRML GG+ V+G+++  T     +    L + + A  K++       
Sbjct:    68 LDEEWTTEHANQVSRMLPGGLLVLGVFIITTLEMGNDCQNALRRLIFAMEKSLSKRRLWN 127

Query:   140 ILEIDSDERLLVHIGYSPRR-YTCRNCTITSNITSSCLRPCDLK--TGLVLKTLRTFKCT 196
               E +  ER+ +HI  S ++   CR   I    +S+  +P D K   GL    L   +CT
Sbjct:   128 FTEEEVSERVTLHICSSTKKGIVCRTYDIRDPKSSA--KPADWKYQNGLSTSWL-PLECT 184

Query:   197 YNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCSTDGLHE 256
              + ++ +P+     S   T     + G+   A ++     +++G   V DE C    L E
Sbjct:   185 VHVNIHIPLSTTSVS--YTLEKNTKNGLIRWAKQIENGVYLINGQ--VKDEDCD---LLE 237

Query:   257 VEXXXXXXNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDI-----I 311
              +      N  +A       V+  LIL+    S A +     I      +KG +     +
Sbjct:   238 GQKKSSRGNVQAASHSFDVKVLTQLILNSDHRSTATVQ----ICSGSVNLKGAVKCRAYV 293

Query:   312 MSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSL--RKTCGLSF---PRRVF 366
              S + ++      +  D+  T     E   E     L+L+ +  +K     F   P RVF
Sbjct:   294 HSNKPKVKDAVQAMKRDILNTVADRCEMLFED----LLLNEIPEKKDSEKEFHILPHRVF 349

Query:   367 VPWLADTY-ICDYLQPSETLE 386
             VP    T  +CDY    E+ E
Sbjct:   350 VPIPGSTVMLCDYKFGDESAE 370

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	394
PF14778	362	ODR4-like: Olfactory receptor 4-like	100.0
KOG4703	431	consensus Uncharacterized conserved protein [Funct	100.0
KOG4703	431	consensus Uncharacterized conserved protein [Funct	93.28
cd08057	157	MPN_euk_non_mb Mpr1p, Pad1p N-terminal (MPN) domai	90.71
cd08065	266	MPN_eIF3h Mpr1p, Pad1p N-terminal (MPN) domains wi	87.99
PF01398	114	JAB: JAB1/Mov34/MPN/PAD-1 ubiquitin protease; Inte	86.17
smart00232	135	JAB_MPN JAB/MPN domain. Domain in Jun kinase activ	80.69
cd08060	182	MPN_UPF0172 Mov34/MPN/PAD-1 family: UPF0172 family	80.43

>PF14778 ODR4-like: Olfactory receptor 4-like

Probab=100.00  E-value=9.8e-93  Score=713.06  Aligned_cols=330  Identities=35%  Similarity=0.600  Sum_probs=288.0

Q ss_pred             EEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHhhhccCcceEE
Q 016171           29 GLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLGGIKV  108 (394)
Q Consensus        29 GLLIGq~s~~~~rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~WVaeHA~qVsRMLPGGi~V  108 (394)
                      ||||||+++ ++||||||++|||+++++++.     ++ +.+        +..++++||++|||||||||+|||||||+|
T Consensus         1 GLlIGq~~s-~~kd~Vv~l~~tP~~d~~~~~-----~~-~~~--------~~~~~~~id~~WVaeHA~qVsRMLPGGi~V   65 (362)
T PF14778_consen    1 GLLIGQSSS-SQKDYVVHLARTPPEDTDDEE-----SD-VRT--------SDSSIKDIDEEWVAEHARQVSRMLPGGISV   65 (362)
T ss_pred             CeEeccccC-CCcceEEEecCCCCccccccc-----cc-ccc--------ccccccccCHHHHHHHHHHHHhhCCCCcEE
Confidence            899999954 499999999999999998740     00 000        234588999999999999999999999999


Q ss_pred             EEEEEEecchhhccch--HHHHHHHHHHHh-hCCCCcCCCCceEEEEEecCC-CeEEEEeeeccCCCCCCCCCcceeeec
Q 016171          109 VGIYVWATDSAFKNST--IELCQTVNAAAK-AVPILEIDSDERLLVHIGYSP-RRYTCRNCTITSNITSSCLRPCDLKTG  184 (394)
Q Consensus       109 lGifv~~~~~~~~~~~--~~L~~~l~~v~k-~~~l~~~~~~e~l~Lhi~~st-kk~~Ck~~d~~~~~~~ss~kpadwK~~  184 (394)
                      |||||+++++.|++++  ..|+++++. .+ ....++.+++|+++||||++| ||++||+|++.++  ++++||||||||
T Consensus        66 lGifvv~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~e~~~l~i~~st~kk~~Ck~~~~~~~--~~~~kpad~K~~  142 (362)
T PF14778_consen   66 LGIFVVAPDDAFKDSSTLNKLKKLLFS-SNSLWSVYNDDVSERLLLHICSSTSKKLTCKSYDVADP--KSSLKPADWKFQ  142 (362)
T ss_pred             EEEEEEcCHHHhccchHHHHHHHHHhh-hcccccccCCCcccceEEEEEcccCceEEEEEEEecCC--CCCCCCccEEec
Confidence            9999999999999876  567777773 22 236678899999999999999 9999999999876  999999999999


Q ss_pred             ccccceeEEEEEEEeceeeeeeecCCCCcchHHHHHHHHHHHHHHhhccceEEEcCeeccCCCCCC---------CCCce
Q 016171          185 LVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFVVNDEPCS---------TDGLH  255 (394)
Q Consensus       185 ~~~~~w~~l~c~~~~d~~lPl~~~~~~~~~~l~~~l~~~l~~~~~~l~~s~~lidG~~~~~d~~l~---------~~~~~  255 (394)
                      ++.++|++|+|+|+||+++||.+. ....+++++||+++|+.|+++|++|++||||+++++++++.         ++++|
T Consensus       143 ~~~~~w~~l~c~~~~d~~~pl~~~-~~~~~~~~~~l~~~l~~~~~~l~~s~~lidG~~~~~~~~l~~~~~~~~~~~~~~~  221 (362)
T PF14778_consen  143 NKPTSWIQLECSYDFDLVIPLSDG-KSSKETLEKQLKNILEPWAKQLESSVVLIDGEVRDDDEDLESSSKSSKNSSDSIF  221 (362)
T ss_pred             cccceEEEEEEEEEEeeeeeccCC-ccchHHHHHHHHHHHHHHHHHhhccEEEECCEEcCCcchhhcccCCcccCCCCcE
Confidence            999999999999999999999942 23457999999999999999999999999999999999884         34578


Q ss_pred             EEEEEeecCcCCCcccccccceeeEEEEEeEEEEEEEeCCCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCCCCC
Q 016171          256 EVELLLPLLNDTSAEACSQKDVVGLLILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGG  335 (394)
Q Consensus       256 ~v~ll~p~~~~~~~~~~~~~~~~g~i~~~G~v~~rAyv~~k~~v~~Ai~aIK~DIirSL~sR~ei~~d~l~~~~~~~~~~  335 (394)
                      +|++|+|+.++..+.++.++.|+|+|+|+|.|+||||+|+|++|++|++|||+||||||++|+|||||+|++++++..+.
T Consensus       222 ~v~ll~p~~~~~~~~~~~~~~~~g~i~~~G~v~~rAyv~~K~sv~eA~~alK~DIirSL~sR~ei~~d~l~~~~~~~~~~  301 (362)
T PF14778_consen  222 DVDLLLPFQNSNPRSTIKVQSCSGSIRFSGSVSCRAYVHSKESVAEAIQALKRDIIRSLSSRLEILCDDLEDDEEEESDS  301 (362)
T ss_pred             EEEEEecccCCCCcccceeeecceEEEEEEEEEEEEEECCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence            99999999888888889999999999999999999999999999999999999999999999999999999876543310


Q ss_pred             CCCccCCCCchhhhhhhcccccCCCCCceEEeecCC--ceeEEeecCCCCCHHHHHhhcc
Q 016171          336 GEEASNEKPVSKLILHSLRKTCGLSFPRRVFVPWLA--DTYICDYLQPSETLEVCISKTI  393 (394)
Q Consensus       336 ~~~~s~~~p~~~~~~~~~~~~~~~~lPRRV~vp~~~--~v~~cDYlF~~E~~~d~~~~~~  393 (394)
                              .....        +.++|||||||||++  +++||||||+||+++|+++|+.
T Consensus       302 --------~~~~~--------~~~~lPrRv~~p~~~~~~v~~cDYlF~~E~~~d~~~~~~  345 (362)
T PF14778_consen  302 --------SEEEI--------EVHELPRRVFVPWPSSPSVQFCDYLFPDETAEDAVERFK  345 (362)
T ss_pred             --------ccccc--------ccccCCceEEEecCCCCceEEEEecCCCCCHHHHHHHHH
Confidence                    00111        367899999999997  7999999999999999999973

>KOG4703 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.6e-46  Score=355.48  Aligned_cols=288  Identities=22%  Similarity=0.326  Sum_probs=233.2

Q ss_pred             CCCCceEEEEeeecCCCCCccEEEEec-CCCCCcc--cccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHh
Q 016171           22 SGLSAQVGLLIGKLSPTLDRGFIFDFI-PTPQNDA--GEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQV   98 (394)
Q Consensus        22 ~~~~~~~GLLIGq~s~~~~rd~Vv~l~-~TP~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~WVaeHA~qV   98 (394)
                      .|.+...-+|||....  ..||.++++ +.|---.  .+.+                    ..++..+..+|+.+||...
T Consensus         4 ~Gi~a~a~Fiigsfc~--~gD~h~A~askcpvh~salee~A--------------------tEkS~mledeWm~d~aErl   61 (431)
T KOG4703|consen    4 GGILALAVFIIGSFCL--AGDFHNALASKCPVHRSALEEFA--------------------TEKSIMLEDEWMFDEAERL   61 (431)
T ss_pred             CcceEEEEEeeeehhh--cccHHHHHhhcCcchhHHHHHhh--------------------hhhhHhHHHhhcccHHHHH
Confidence            3556677889999987  889999988 3443321  2211                    1224567789999999999


Q ss_pred             hhccCcceEEEEEEEEecchhhccchHHHHHHHHHHHhhCCCCcCCCCceEEEEEecCCCeEEEEeeeccCCCCCCCCCc
Q 016171           99 SRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYSPRRYTCRNCTITSNITSSCLRP  178 (394)
Q Consensus        99 sRMLPGGi~VlGifv~~~~~~~~~~~~~L~~~l~~v~k~~~l~~~~~~e~l~Lhi~~stkk~~Ck~~d~~~~~~~ss~kp  178 (394)
                      .||||||++|+||.|.+                                         +||+.||++++.++  |+..||
T Consensus        62 ~RmlpggiHi~giaw~S-----------------------------------------dKK~F~rdr~~H~h--Ksl~Ri   98 (431)
T KOG4703|consen   62 ERMLPGGIHICGIAWAS-----------------------------------------DKKIFCRDRDIHDH--KSLARI   98 (431)
T ss_pred             HhhccCceEEEeeeccc-----------------------------------------ccceeeccccccCc--hhhcch
Confidence            99999999999999873                                         57789999999766  999999


Q ss_pred             ceeeec-ccccceeEE-EEEEEeceeeeeeecCC-CCcchHHHHHHHHHHH-----HHHhhccc-------eEEEcCeec
Q 016171          179 CDLKTG-LVLKTLRTF-KCTYNFSLRLPIRLVGA-SNTQTFSDILRQGISV-----HANELRGA-------KAVVDGNFV  243 (394)
Q Consensus       179 adwK~~-~~~~~w~~l-~c~~~~d~~lPl~~~~~-~~~~~l~~~l~~~l~~-----~~~~l~~s-------~~lidG~~~  243 (394)
                      +|||+| +..++|.++ .|++.+...+|+....+ .-..|++.+-+++...     |++.++++       |.++||++.
T Consensus        99 a~mknQi~~an~ddSisd~mi~iffe~P~sapigaiidvT~~gNdka~k~qfqkleW~k~i~NasarivhnVpldnGqpk  178 (431)
T KOG4703|consen   99 ADMKNQIGLANSDDSISDCMIHIFFEIPLSAPIGAIIDVTLEGNDKAGKTQFQKLEWAKEIENASARIVHNVPLDNGQPK  178 (431)
T ss_pred             HhhhccccccccccchhhcEEEEEEecCCCCcccceEEEEeccCccccchhhhHHHHHHHhhcccceeeeeeeccCCCcC
Confidence            999999 789999999 99999999999987432 2336788888888877     99999999       899999999


Q ss_pred             cCCCCCC------CCC------------------------------ceEEEEEeecCcCCCccc-ccccceeeEEEEEeE
Q 016171          244 VNDEPCS------TDG------------------------------LHEVELLLPLLNDTSAEA-CSQKDVVGLLILSGS  286 (394)
Q Consensus       244 ~~d~~l~------~~~------------------------------~~~v~ll~p~~~~~~~~~-~~~~~~~g~i~~~G~  286 (394)
                      +++++|-      +.|                              ++..++++.++-..+++. +..+.|+|...+.|.
T Consensus       179 D~~~DLl~aqKkf~n~lfQ~ef~l~DgeiRddkeplikdikknkkttieaQLfLNplflD~RelgAiddIaS~mhel~f~  258 (431)
T KOG4703|consen  179 DEDCDLLEAQKKFSNGLFQAEFHLFDGEIRDDKEPLIKDIKKNKKTTIEAQLFLNPLFLDHRELGAIDDIASGMHELKFA  258 (431)
T ss_pred             ccchhHHHHHHhhcCCceeEEEeeccchhccccchhhhhhhhcccceehHhhhhCchhccchhhhhHHHHhccchhhhee
Confidence            8888641      111                              123444443232445555 567899999999999


Q ss_pred             EEEEEEeCCCCC-HHHHHHHHHHHHHHhHHHHHHHHhhhcccCCCCCCCCCCCccCCCCchhhhhhhcccccCCCCCc-e
Q 016171          287 VCSFAFLTPKEP-ISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEASNEKPVSKLILHSLRKTCGLSFPR-R  364 (394)
Q Consensus       287 v~~rAyv~~k~~-v~~Ai~aIK~DIirSL~sR~ei~~d~l~~~~~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~lPR-R  364 (394)
                      |.||||+|+-.| |++|++|||+||+|+|++|||||+|+|..++++          ++|++.+.+|+        ||| |
T Consensus       259 ie~RAai~sik~kVKDAiqAiKh~il~nl~aR~ElhfE~lel~Eee----------~k~~s~i~~Hq--------LPrpa  320 (431)
T KOG4703|consen  259 IECRAAIHSIKPKVKDAIQAIKHDILNNLAARCELHFEDLELNEEE----------EKKDSEIEFHQ--------LPRPA  320 (431)
T ss_pred             eeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc----------cCCCcCceEEe--------cCCcc
Confidence            999999997666 999999999999999999999999999877654          35778888776        999 9


Q ss_pred             EEeecCCc-eeEEeecCCCCCHHHHHhhc
Q 016171          365 VFVPWLAD-TYICDYLQPSETLEVCISKT  392 (394)
Q Consensus       365 V~vp~~~~-v~~cDYlF~~E~~~d~~~~~  392 (394)
                      +|||.|++ +.+|||+|.+|++||+++++
T Consensus       321 t~Vl~~~paili~Df~FdadnaEdaq~~F  349 (431)
T KOG4703|consen  321 TFVLLPGPAILICDFKFDADNAEDAQDHF  349 (431)
T ss_pred             eEEecCCCeEEEeecccCcccHHHHHHHH
Confidence            99999876 99999999999999999986

>KOG4703 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.28  E-value=0.063  Score=52.80  Aligned_cols=54  Identities=24%  Similarity=0.325  Sum_probs=40.4

Q ss_pred             ccCcceEEEEEEEEecchhhccchHHHH------H---HHHHHHhhC------CCCcCCCCceEE---EEEe
Q 016171          101 MLLGGIKVVGIYVWATDSAFKNSTIELC------Q---TVNAAAKAV------PILEIDSDERLL---VHIG  154 (394)
Q Consensus       101 MLPGGi~VlGifv~~~~~~~~~~~~~L~------~---~l~~v~k~~------~l~~~~~~e~l~---Lhi~  154 (394)
                      |||||+-++|+|++++--...+.++.|+      +   ..+++++++      ...+.+..+|++   +|||
T Consensus         1 l~d~Gi~a~a~Fiigsfc~~gD~h~A~askcpvh~salee~AtEkS~mledeWm~d~aErl~RmlpggiHi~   72 (431)
T KOG4703|consen    1 LLDGGILALAVFIIGSFCLAGDFHNALASKCPVHRSALEEFATEKSIMLEDEWMFDEAERLERMLPGGIHIC   72 (431)
T ss_pred             CCCCcceEEEEEeeeehhhcccHHHHHhhcCcchhHHHHHhhhhhhHhHHHhhcccHHHHHHhhccCceEEE
Confidence            8999999999999998755555555554      2   456777777      345567788888   9998

>cd08057 MPN_euk_non_mb Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity (non metal-binding); eukaryotic

Probab=90.71  E-value=5  Score=35.77  Aligned_cols=68  Identities=19%  Similarity=0.390  Sum_probs=52.5

Q ss_pred             CCceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHhhhccC
Q 016171           24 LSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLL  103 (394)
Q Consensus        24 ~~~~~GLLIGq~s~~~~rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~WVaeHA~qVsRMLP  103 (394)
                      ...++|+|+|....  ..=-|..-.+.|.+++++                         ...+|.+|..+=-++-.+.-|
T Consensus        22 ~~~v~G~LlG~~~~--~~veV~nsF~lp~~~~~~-------------------------~~~~d~~y~~~m~~~~~~v~~   74 (157)
T cd08057          22 IKRVIGVLLGYVDG--DKIEVTNSFELPFDEEEE-------------------------SIFIDTEYLEKRYNLHKKVYP   74 (157)
T ss_pred             CCeEEEEEEeEEeC--CEEEEEEeEEccccCCCc-------------------------chhhhHHHHHHHHHHHHHhCC
Confidence            46899999999975  555566777888855432                         124788999888888888888


Q ss_pred             cceEEEEEEEEecchh
Q 016171          104 GGIKVVGIYVWATDSA  119 (394)
Q Consensus       104 GGi~VlGifv~~~~~~  119 (394)
                       ...|||-|.+++...
T Consensus        75 -~~~vVGWY~~~~~~~   89 (157)
T cd08057          75 -QEKIVGWYSIGSNNS   89 (157)
T ss_pred             -CCCEEEEEeecCCCC
Confidence             789999999998743

This family contains MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains variants lacking key residues in the JAB1/MPN/Mov34 metalloenzyme (JAMM) motif and are unable to coordinate a metal ion. Comparisons of key catalytic and metal binding residues explain why the MPN-containing proteins Rpn7/PSMD7, Rpn8/PSMD8, CSN6, Prp8p, and the translation initiation factor 3 subunits f and h do not show catalytic isopeptidase activity. It has been proposed that the MPN domain in these proteins has a primarily structural function. Rpn7 is known to be critical for the integrity of the 26S proteasome complex by establishing a correct lid structure. It is necessary for the incorporation/anchoring of Rpn3 and Rpn12 to the lid and essential for viability and normal mitosis. CSN6 is a highly conserved protein complex with diverse functions, including several import

>cd08065 MPN_eIF3h Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in eIF2h

Probab=87.99  E-value=11  Score=36.69  Aligned_cols=131  Identities=14%  Similarity=0.110  Sum_probs=76.2

Q ss_pred             cEEEecCchhHHHHHHHhhCCCCceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcc
Q 016171            3 NTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSI   82 (394)
Q Consensus         3 Rtv~~ee~~v~~y~~~l~~~~~~~~~GLLIGq~s~~~~rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (394)
                      ++|.++...+-+-++-+.+....-++|+|+|....  +.=-|....|.|..+++++.                      .
T Consensus         1 ~~V~I~~~vllkIv~H~~~~~p~~v~G~LLG~~~~--~~leVtn~Fp~P~~~~~~~~----------------------~   56 (266)
T cd08065           1 TSVQIDGLVVLKIIKHCKEELPELVQGQLLGLDVG--GTLEVTNCFPFPKSEEDDSD----------------------R   56 (266)
T ss_pred             CEEEEeHHHHHHHHHHHhcCCCcEEEEEEeeeEcC--CEEEEEeccCCCCCCCCCcc----------------------h
Confidence            46677766555555555554445799999999975  54566688899987775421                      0


Q ss_pred             cccCCHHHHHHHHHHhhhccCcceEEEEEEEEecchhhccchHHHHHHHHHHHhhCCCCcCCCCceEEEEEecC---CCe
Q 016171           83 SLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIGYS---PRR  159 (394)
Q Consensus        83 ~~~iD~~WVaeHA~qVsRMLPGGi~VlGifv~~~~~~~~~~~~~L~~~l~~v~k~~~l~~~~~~e~l~Lhi~~s---tkk  159 (394)
                      ...+|.++-.+.-+..-+.=| .-.|||.|-.+|-..|.+  ..+....++-..       ...+.+.|-+++.   +.+
T Consensus        57 ~~~~~~~yq~~m~~~~r~v~~-~e~iVGWY~S~p~~~~~~--~s~id~~~~~q~-------~~~~~v~Li~D~~~s~~g~  126 (266)
T cd08065          57 ADEDIADYQLEMMRLLREVNV-DHNHVGWYQSTYLGSFFT--RDLIETQYNYQE-------AIEESVVLVYDPSKTSQGS  126 (266)
T ss_pred             hhhhHHHHHHHHHHHHHHhCC-CCcEEEeEeecCCCCcCC--HHHHHHHHHHhc-------cCCCCEEEEECCCcccccc
Confidence            112333443333322222211 339999999999555544  234444444432       2244677777774   455


Q ss_pred             EEEEeeec
Q 016171          160 YTCRNCTI  167 (394)
Q Consensus       160 ~~Ck~~d~  167 (394)
                      ...|.|-.
T Consensus       127 l~lkAyrl  134 (266)
T cd08065         127 LSLKAYRL  134 (266)
T ss_pred             eeeEEEEE
Confidence            67776644

Eukaryotic translation initiation factor 3 (eIF3) subunit h (eIF3h; eIF3 subunit 3; eIF3S3; eIF3-gamma; eIF3-p40) is an evolutionarily non-conserved subunit of the functional core that comprises eIF3a, eIF3b, eIF3c, eIF3e, eIF3f, and eIF3h, and contains the MPN domain. However, it lacks the canonical JAMM motif, and therefore does not show catalytic isopeptidase activity.Together with eIF3e and eIF3f, eIF3h stabilizes the eIF3 complex. Results suggest that eIF3h regulates cell growth and viability, and that over-expression of the gene may provide growth advantage to prostate, breast, and liver cancer cells. For example, EIF3h gene amplification is common in late-stage prostate cancer suggesting that it may be functionally involved in the progression of the disease. It has been shown that coamplification of MYC, a well characterized oncogene involved in cell growth, different

>PF01398 JAB: JAB1/Mov34/MPN/PAD-1 ubiquitin protease; InterPro: IPR000555 Members of this family are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors

Probab=86.17  E-value=2.1  Score=35.78  Aligned_cols=90  Identities=22%  Similarity=0.329  Sum_probs=54.4

Q ss_pred             ccEEEecCchhHHHHHHHhhCCCCceEEEEeeecCCCCC-ccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCC
Q 016171            2 VNTVVVEKPQLLSAEDRLSQSGLSAQVGLLIGKLSPTLD-RGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSD   80 (394)
Q Consensus         2 ~Rtv~~ee~~v~~y~~~l~~~~~~~~~GLLIGq~s~~~~-rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (394)
                      +++|.++...+-+..+-.......-++|+|+|....  . .=.|....+.|..+.++.                      
T Consensus         3 ~~~V~i~p~vll~i~~h~~r~~~~~v~G~LlG~~~~--~~~v~I~~~f~~p~~~~~~~----------------------   58 (114)
T PF01398_consen    3 VQTVQIHPLVLLKIIDHATRSSPNEVIGLLLGTQDG--DNTVEITNSFPVPHSESEDD----------------------   58 (114)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHHCTEEEEEEEEEEET--T-EEEEEEEEEESEEEESSE----------------------
T ss_pred             cEEEEECHHHHHHHHHHHhcCCCCEEEEEEEEEecC--ceEEEEEEEEEeeEecCccc----------------------
Confidence            456666666444444443332234689999999976  4 334555557777666542                      


Q ss_pred             cccccCCHHHHHHHHHHhhhccCcceEEEEEEEEecch
Q 016171           81 SISLVIDKDWIAEHARQVSRMLLGGIKVVGIYVWATDS  118 (394)
Q Consensus        81 ~~~~~iD~~WVaeHA~qVsRMLPGGi~VlGifv~~~~~  118 (394)
                        ....+.++. ..+..-.+++-+-..+||-|-.+|.-
T Consensus        59 --~~~~~~~~~-~~~~~~~~~~~~~~~iVGWY~s~p~~   93 (114)
T PF01398_consen   59 --CDMDDEDFQ-KKMIELLKKVNPNLEIVGWYHSHPNI   93 (114)
T ss_dssp             --EEEECCHHH-HHHHHHHHHCSTTSEEEEEEEEESSS
T ss_pred             --cccchhhHH-HHHHhhhccccccceEEEEEEccCCc
Confidence              123444555 44444444443449999999999875

This family is also known as the MPN domain [] and PAD-1-like domain []. It has been shown that this domain occurs in prokaryotes []. Mov34 proteins act as the regulatory subunit of the 26 proteasome, which is involved in the ATP-dependent degradation of ubiquitinated proteins. The function of this domain is unclear, but it is found in the N terminus of the proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. A number of the proteins associated with this family belong to MEROPS peptidase family M67 (clan M-). This includes the Poh1 peptidase of Saccharomyces cerevisiae (Baker's yeast) which is a component of the 19S proteasome regulatory particle.; GO: 0005515 protein binding; PDB: 2ZNV_D 2ZNR_A 4E0Q_A 2P87_A 2P8R_A 2O96_B 2O95_A 3RZU_F 3RZV_A.

>smart00232 JAB_MPN JAB/MPN domain

Probab=80.69  E-value=12  Score=31.46  Aligned_cols=79  Identities=19%  Similarity=0.285  Sum_probs=49.1

Q ss_pred             hHHHHHHHhhCCCCceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHH
Q 016171           12 LLSAEDRLSQSGLSAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWI   91 (394)
Q Consensus        12 v~~y~~~l~~~~~~~~~GLLIGq~s~~~~rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~WV   91 (394)
                      +.+.++.+......-.+|+|+|+...  ++-.|....+.|......                        ....++.++.
T Consensus         9 ~~~i~~h~~~~~p~e~~G~L~G~~~~--~~~~i~~~~~~p~~~~~~------------------------~~~~~~~~~~   62 (135)
T smart00232        9 PLNILKHAIRDGPEEVCGVLLGKSNK--DRPEVKEVFAVPNEPQDD------------------------SVQEYDEDYS   62 (135)
T ss_pred             HHHHHHHHhcCCCcEEEEEEEEEEcC--CEEEEEEEEecCcCCCCc------------------------chhhhhhhHH
Confidence            44444444443334689999999865  555556666666433221                        0113556666


Q ss_pred             HHHHHHhhhccCcceEEEEEEEEecc
Q 016171           92 AEHARQVSRMLLGGIKVVGIYVWATD  117 (394)
Q Consensus        92 aeHA~qVsRMLPGGi~VlGifv~~~~  117 (394)
                      .+...+.. ...-|..+||.|-..|.
T Consensus        63 ~~~~~~~~-~~~~~~~~vGwyhshp~   87 (135)
T smart00232       63 HLMDEELK-KVNKDLEIVGWYHSHPD   87 (135)
T ss_pred             HHHHHHHH-hhCCCceEEEEEEcCCC
Confidence            66655543 36678899999999986

Domain in Jun kinase activation domain binding protein and proteasomal subunits. Domain at Mpr1p and Pad1p N-termini. Domain of unknown function.

>cd08060 MPN_UPF0172 Mov34/MPN/PAD-1 family: UPF0172 family of unknown function includes neighbor of COX4 (Noc4p)

Probab=80.43  E-value=12  Score=34.57  Aligned_cols=93  Identities=18%  Similarity=0.176  Sum_probs=56.0

Q ss_pred             CceEEEEeeecCCCCCccEEEEecCCCCCcccccccccCCCCCCCCCCCCCCCCCCcccccCCHHHHHHHHHHhhhccCc
Q 016171           25 SAQVGLLIGKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDKKKPPSKSKSQPSDSISLVIDKDWIAEHARQVSRMLLG  104 (394)
Q Consensus        25 ~~~~GLLIGq~s~~~~rd~Vv~l~~TP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~WVaeHA~qVsRMLPG  104 (394)
                      .-+.|||+|+... ++.-.|+..+|.+..--.     +                  .....|...-|-.||++-      
T Consensus        19 ~evcGlLlG~~~~-~~~~~V~d~vPl~h~~~~-----l------------------~P~~Eval~~ve~~~~~~------   68 (182)
T cd08060          19 CAVNGLLLGKKSS-GGSVEITDAVPLFHSCLA-----L------------------APMLEVALALVDAYCKSS------   68 (182)
T ss_pred             chheEEEEeeecC-CCCEEEEEEEEcCCCccc-----c------------------CHHHHHHHHHHHHHHHHC------
Confidence            3799999999863 255688899887652110     0                  012334556677778773      


Q ss_pred             ceEEEEEEEEecchhhccchHHHHHHHHHHHhhCCCCcCCCCceEEEEEe
Q 016171          105 GIKVVGIYVWATDSAFKNSTIELCQTVNAAAKAVPILEIDSDERLLVHIG  154 (394)
Q Consensus       105 Gi~VlGifv~~~~~~~~~~~~~L~~~l~~v~k~~~l~~~~~~e~l~Lhi~  154 (394)
                      |+.|+|+|-..|.-.=......-.++..+|.+..       +.-++|.|+
T Consensus        69 gl~IvG~Yhsh~~~~d~~~~~~a~kIadki~~~~-------~~a~ll~vd  111 (182)
T cd08060          69 GLVIVGYYQANERLDDSSPSPVAKKIADKIAENF-------SNACLLMVD  111 (182)
T ss_pred             CCEEEEEEecCCcccCCCCcHHHHHHHHHHHHhC-------CCCEEEEEe
Confidence            9999999998776331122233344555554322       355566555

This family includes Noc4p (neighbor of COX4; neighbor of Cytochrome c Oxidase 4; nucleolar complex associated 4 homolog) which belongs to the family of unknown function, UPF0172, with MPN/JAMM-like domains. Proteins in this family are homologs of the NOC4 gene which is conserved in eukaryotic members including human, dog, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.pombe, K.lactis, E.gossypii, M.grisea, N.crassa, A.thaliana, and rice. NOC4 highly expressed in the pancreas and moderately in liver, heart, lung, kidney, brain, skeletal muscle, and placenta. This nucleolar protein forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits. This family of eukaryotic MPN-like domains lacks the key residues that coordinate a metal ion and therefore does not show catalytic isopeptidase activity.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	394
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 61/420 (14%), Positives = 113/420 (26%), Gaps = 138/420 (32%)

Query: 33  GKLSPTLDRGFIFDFIPTPQNDAGEAACSVSKDDK--KKPPSKSK---------SQPSDS 81
             +    +  F+ +F      D  ++  S  + D       + S          S+  + 
Sbjct: 19  KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 82  I------SLVIDKDWIAEHARQVSRMLLGGIKVVGIYV------WATDSAFKNSTIELCQ 129
           +       L I+  ++    +   R      +   +Y+      +  +  F    +   Q
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR---MYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 130 TVNAAAKAVPILEIDSDERLLVH----IGYSPRRYTCRNCTITSNITSSCLRPCDLKTGL 185
                 +A  +LE+   + +L+      G                           KT +
Sbjct: 136 PYLKLRQA--LLELRPAKNVLIDGVLGSG---------------------------KTWV 166

Query: 186 VLKTLRTFK--CTYNFSLRLPIRLVGASNTQTFSDILRQGISVHANELRGAKAVVDGNFV 243
            L    ++K  C  +F     I  +   N  +   +L     +           +D N+ 
Sbjct: 167 ALDVCLSYKVQCKMDF----KIFWLNLKNCNSPETVLEMLQKLLYQ--------IDPNWT 214

Query: 244 VNDEPCSTDGLHEVEL---LLPLLNDTSAEACSQKDVVGLLILSGSVCS------FAF-- 292
              +  S   L    +   L  LL     E C       LL+L   V +      F    
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENC-------LLVLLN-VQNAKAWNAFNLSC 266

Query: 293 ---LT------------------PKEPISQAFSEIKGDIIMSLQSR-LDVICDEVDEDLA 330
              LT                    +  S   +  +     SL  + LD       +DL 
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV---KSLLLKYLDCRP----QDL- 318

Query: 331 PTAGGGEEASNEKP-VSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYLQPSETLEVCI 389
           P      E     P    +I  S+R           +  W      CD L  +  +E  +
Sbjct: 319 P-----REVLTTNPRRLSIIAESIRD-----GLAT-WDNWK--HVNCDKL--TTIIESSL 363

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 51/339 (15%), Positives = 90/339 (26%), Gaps = 99/339 (29%)

Query: 69  KPPSKSKSQPSDSISLVID--KDWIAE--HARQVSRMLLGGIKVVGIY--VWATDS---- 118
            P   S+S  S +I L I   +  +     ++     LL       +   V   ++    
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-------VLLNVQ--NAKAWN 260

Query: 119 AFKNSTIELCQT--------VNAAAKAVPILEIDSDERLLVHIGYSPR--RYTCRNCTIT 168
           AF  S    C+         V     A     I  D   +     +P   +         
Sbjct: 261 AFNLS----CKILLTTRFKQVTDFLSAATTTHISLDHHSM---TLTPDEVKSLLLKYL-- 311

Query: 169 SNITSSCLRP--CD---LKTGLVLKTLRTFKCTYNFSLRLPIRLVGASNTQTFSDILRQG 223
            +     L          +  ++ +++R    T++    +        N    + I+   
Sbjct: 312 -DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV--------NCDKLTTIIESS 362

Query: 224 ISV-HANELRGAKAVVDGNFVV--NDEPCSTDGLHEVELLLPLLNDTSAEACSQKDVVGL 280
           ++V    E R  K        V        T        LL L+     ++     V  L
Sbjct: 363 LNVLEPAEYR--KMFDR--LSVFPPSAHIPTI-------LLSLIWFDVIKSDVMVVVNKL 411

Query: 281 LILSGSVCSFAFLTPKEPISQAFSEIKGDIIMSLQSRLDVICDEVDEDLAPTAGGGEEAS 340
              S        L  K+P     S      I S+   L V  +                 
Sbjct: 412 HKYS--------LVEKQPKESTIS------IPSIYLELKVKLE----------------- 440

Query: 341 NEKPVSKLILHSLRKTCGLSFPRRVFVPWLADTYICDYL 379
           NE  + + I+          F     +P   D Y   ++
Sbjct: 441 NEYALHRSIVDHYNIPKT--FDSDDLIPPYLDQYFYSHI 477

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00