Citrus Sinensis ID: 016207

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
MGFKEQEKKSGVREKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNGMH
ccHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccHHccHHHHHHccccEEccccccccccccccccHHHHHHHHHHccccEEEcccccccccccHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHcccccccccEEEEEEccccEEEEEEcccccEEEEEEEcccccc
ccccHHHccccHHHHHEHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccEEEEcHHHHcccccHHHHHHHHHHHHHccHHHHcccEEEcccccEcccccccccccEccccccccHHHHHHHHHHcccEEEEEEEcccEcccccEcccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHcHHHcccEEEccccccccHHHHHHHHHHHHccHHHcEccEEEEccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccHHHHHHHccccccccEEEEEEcccccEEEEEEccccEEEEEEEcccccc
mgfkeqekksgvrekMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSyekasysrgfsrnfgkifdtsnygilqlnnglastpqmgwnswnffacNISETIIKETADALVSTGlaelgydhvniddcwssplrdlkgqlvpdtitfpsGIKALADYvhgkglklgiysdagvftcqvrpgslfhekddaplfaswgvdylkydncfnlgiepkkryppmrdalnetGCSIFYSLcewgvddpalwagkvgnswrttgdindtwasmtsIADINdkwasyagpggwndpdmlevgnggmsyQEYRAHFSIWALMkaplligcdvrnmtAETFEILSnkeviavnqdplgvqgrkvFGWVLCLDIAWWLLSGidvqklklsqhngmh
mgfkeqekksgvrekmrvgvamssmkkKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNGMH
MGFKEQEKKSGVREKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNGMH
**************************KKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKL*********
*****************************FVFALVLSLIIDVGFAGRVVVPLLQSYE**SYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNG**
*************EKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNGMH
***********VREKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQH****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFKEQEKKSGVREKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVLCLDIAWWLLSGIDVQKLKLSQHNGMH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query393 2.2.26 [Sep-21-2011]
Q42656378 Alpha-galactosidase OS=Co N/A no 0.712 0.740 0.722 1e-118
P14749411 Alpha-galactosidase OS=Cy N/A no 0.707 0.676 0.706 1e-118
Q9FXT4417 Alpha-galactosidase OS=Or no no 0.712 0.671 0.704 1e-115
Q55B10385 Probable alpha-galactosid yes no 0.709 0.724 0.546 1e-85
B3PGJ1404 Alpha-galactosidase A OS= yes no 0.694 0.675 0.548 3e-83
Q90744405 Alpha-N-acetylgalactosami yes no 0.712 0.691 0.465 2e-71
Q9P4V4 470 Alpha-galactosidase OS=Zy N/A no 0.720 0.602 0.463 2e-71
Q03647 471 Alpha-galactosidase OS=Sa N/A no 0.704 0.588 0.475 3e-71
Q9UVD6 474 Alpha-galactosidase OS=To yes no 0.720 0.597 0.463 1e-70
Q9URZ0436 Alpha-galactosidase mel1 yes no 0.712 0.642 0.461 3e-70
>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 Back     alignment and function desciption
 Score =  426 bits (1095), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/281 (72%), Positives = 229/281 (81%), Gaps = 1/281 (0%)

Query: 83  LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
           L NGL  TP MGWNSWN F CN+ E +I+ETADA+VS GLA LGY ++N+DDCW+   RD
Sbjct: 16  LANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAELNRD 75

Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFA 201
            +G LVP   TFPSGIKALADYVH KGLKLGIYSDAG  TC +  PGSL HE+ DA  FA
Sbjct: 76  SQGNLVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFA 135

Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
           SWGVDYLKYDNC N  I PK+RYP M  AL  +G SIF+SLCEWG +DPA WA +VGNSW
Sbjct: 136 SWGVDYLKYDNCNNNNISPKERYPIMSKALLNSGRSIFFSLCEWGEEDPATWAKEVGNSW 195

Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
           RTTGDI+D+W+SMTS AD+NDKWASYAGPGGWNDPDMLEVGNGGM+  EYR+HFSIWAL 
Sbjct: 196 RTTGDIDDSWSSMTSRADMNDKWASYAGPGGWNDPDMLEVGNGGMTTTEYRSHFSIWALA 255

Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKV 362
           KAPLLIGCD+R+M   TF++LSN EVIAVNQD LGVQG KV
Sbjct: 256 KAPLLIGCDIRSMDGATFQLLSNAEVIAVNQDKLGVQGNKV 296
Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O.
Coffea arabica (taxid: 13443)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2
>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 Back     alignment and function description
>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 Back     alignment and function description
>sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 Back     alignment and function description
>sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 Back     alignment and function description
>sp|Q90744|NAGAB_CHICK Alpha-N-acetylgalactosaminidase OS=Gallus gallus GN=NAGA PE=1 SV=1 Back     alignment and function description
>sp|Q9P4V4|MEL_ZYGMR Alpha-galactosidase OS=Zygosaccharomyces mrakii GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|Q03647|MEL_SACPS Alpha-galactosidase OS=Saccharomyces pastorianus GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|Q9UVD6|MEL_TORDE Alpha-galactosidase OS=Torulaspora delbrueckii GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|Q9URZ0|AGAL_SCHPO Alpha-galactosidase mel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mel1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
297816956430 hypothetical protein ARALYDRAFT_486071 [ 0.824 0.753 0.816 1e-157
356516253418 PREDICTED: alpha-galactosidase-like isof 0.849 0.799 0.786 1e-156
22331822437 alpha-galactosidase [Arabidopsis thalian 0.865 0.778 0.771 1e-155
7572929434 alpha-galactosidase-like protein [Arabid 0.849 0.769 0.783 1e-155
255640756374 unknown [Glycine max] 0.849 0.893 0.783 1e-155
52699549431 glycosyl hydrolase family-like protein [ 0.829 0.756 0.783 1e-155
224144974380 predicted protein [Populus trichocarpa] 0.753 0.778 0.864 1e-154
225448651427 PREDICTED: alpha-galactosidase [Vitis vi 0.809 0.744 0.811 1e-152
353441550430 alpha galacdosidase 3 [Cucumis sativus] 0.875 0.8 0.774 1e-152
449457411430 PREDICTED: alpha-galactosidase-like [Cuc 0.875 0.8 0.771 1e-151
>gi|297816956|ref|XP_002876361.1| hypothetical protein ARALYDRAFT_486071 [Arabidopsis lyrata subsp. lyrata] gi|297322199|gb|EFH52620.1| hypothetical protein ARALYDRAFT_486071 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 267/327 (81%), Positives = 291/327 (88%), Gaps = 3/327 (0%)

Query: 36  LSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGW 95
           LS+++    +GRV  PLLQS         FS++F  I+DTS YG LQLNNGLA TPQMGW
Sbjct: 14  LSVLVSQSISGRVKAPLLQSNTGGLV---FSKSFNSIYDTSMYGRLQLNNGLARTPQMGW 70

Query: 96  NSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFP 155
           NSWNFFACNI+ET+IKETADAL+S+GLA+LGY HVNIDDCWS+ LRD KGQLVP   TFP
Sbjct: 71  NSWNFFACNINETVIKETADALLSSGLADLGYIHVNIDDCWSNLLRDSKGQLVPHPETFP 130

Query: 156 SGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFN 215
           SGIK LADYVH KGLKLGIYSDAGVFTCQVRPGSLFHE DDA +FASWGVDYLKYDNCFN
Sbjct: 131 SGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNCFN 190

Query: 216 LGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMT 275
           LGI+P KRYPPMRDALN TG SIFYSLCEWGVDDPALWA +VGNSWRTT DINDTWASMT
Sbjct: 191 LGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAKEVGNSWRTTDDINDTWASMT 250

Query: 276 SIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMT 335
           +IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HFSIWALMKAPLLIGCDVRNMT
Sbjct: 251 TIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMT 310

Query: 336 AETFEILSNKEVIAVNQDPLGVQGRKV 362
           AETFEILSNKEVIAVNQDPLGVQGRK+
Sbjct: 311 AETFEILSNKEVIAVNQDPLGVQGRKI 337

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356516253|ref|XP_003526810.1| PREDICTED: alpha-galactosidase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|22331822|ref|NP_191190.2| alpha-galactosidase [Arabidopsis thaliana] gi|18377735|gb|AAL67017.1| putative alpha-galactosidase [Arabidopsis thaliana] gi|21281028|gb|AAM45068.1| putative alpha-galactosidase [Arabidopsis thaliana] gi|332645987|gb|AEE79508.1| alpha-galactosidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7572929|emb|CAB87430.1| alpha-galactosidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255640756|gb|ACU20662.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|52699549|gb|AAU86897.1| glycosyl hydrolase family-like protein [Salvia miltiorrhiza] Back     alignment and taxonomy information
>gi|224144974|ref|XP_002325481.1| predicted protein [Populus trichocarpa] gi|222862356|gb|EEE99862.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225448651|ref|XP_002279730.1| PREDICTED: alpha-galactosidase [Vitis vinifera] gi|297736508|emb|CBI25379.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|353441550|gb|AEQ94270.1| alpha galacdosidase 3 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457411|ref|XP_004146442.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|449491655|ref|XP_004158965.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
TAIR|locus:2078416437 AT3G56310 [Arabidopsis thalian 0.862 0.775 0.775 2.4e-147
UNIPROTKB|Q7XIV4425 OJ1409_C08.26 "Os07g0679300 pr 0.748 0.691 0.836 2.4e-140
TAIR|locus:2150763396 AGAL2 "alpha-galactosidase 2" 0.712 0.707 0.708 1.1e-112
UNIPROTKB|Q9FXT4417 LOC_Os10g35110 "Alpha-galactos 0.707 0.666 0.709 1.9e-108
TAIR|locus:2150778410 AGAL1 "alpha-galactosidase 1" 0.770 0.739 0.650 1.5e-106
UNIPROTKB|Q23YJ0382 TTHERM_01181990 "Melibiase fam 0.727 0.748 0.652 7.5e-105
UNIPROTKB|Q23DW6381 TTHERM_00043770 "Alpha-galacto 0.709 0.732 0.657 4.7e-103
UNIPROTKB|Q9S2C9 680 Q9S2C9 "Probable secreted alph 0.727 0.420 0.578 2.8e-89
DICTYBASE|DDB_G0271490385 melA "putative alpha-galactosi 0.709 0.724 0.546 1.7e-82
UNIPROTKB|B3PGJ1404 agaA "Alpha-galactosidase A" [ 0.699 0.680 0.546 1.8e-80
TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
 Identities = 269/347 (77%), Positives = 297/347 (85%)

Query:    20 VAMSSMKKKRFVFALV----LSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDT 75
             V M  MK    +F +V    LS+++    AGRV  PLLQS         FS++F  I+DT
Sbjct:     2 VIMKKMKDS-VLFLVVGLFSLSVLVSQSIAGRVKAPLLQSNTGGLV---FSKSFNSIYDT 57

Query:    76 SNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDC 135
             S YG LQLNNGLA TPQMGWNSWNFFACNI+ET+IKETADALVS+GLA+LGY HVNIDDC
Sbjct:    58 SMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGLADLGYIHVNIDDC 117

Query:   136 WSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKD 195
             WS+ LRD +GQLVP   TFPSGIK LADYVH KGLKLGIYSDAGVFTC+V PGSLFHE D
Sbjct:   118 WSNLLRDSEGQLVPHPETFPSGIKLLADYVHSKGLKLGIYSDAGVFTCEVHPGSLFHEVD 177

Query:   196 DAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAG 255
             DA +FASWGVDYLKYDNCFNLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWA 
Sbjct:   178 DADIFASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAK 237

Query:   256 KVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHF 315
             +VGNSWRTT DINDTWASMT+IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HF
Sbjct:   238 EVGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHF 297

Query:   316 SIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKV 362
             SIWALMKAPLLIGCDVRNMTAET EILSNKE+IAVNQDPLGVQGRK+
Sbjct:   298 SIWALMKAPLLIGCDVRNMTAETLEILSNKEIIAVNQDPLGVQGRKI 344
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009311 "oligosaccharide metabolic process" evidence=IBA
GO:0009505 "plant-type cell wall" evidence=IBA
GO:0016139 "glycoside catabolic process" evidence=IBA
GO:0046477 "glycosylceramide catabolic process" evidence=IBA
GO:0005773 "vacuole" evidence=IDA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0006869 "lipid transport" evidence=RCA
GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA
GO:0007165 "signal transduction" evidence=RCA
GO:0009755 "hormone-mediated signaling pathway" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B3PGJ1AGAL_CELJU3, ., 2, ., 1, ., 2, 20.54890.69460.6757yesno
Q42656AGAL_COFAR3, ., 2, ., 1, ., 2, 20.72240.71240.7407N/Ano
Q55B10AGAL_DICDI3, ., 2, ., 1, ., 2, 20.54640.70990.7246yesno
P14749AGAL_CYATE3, ., 2, ., 1, ., 2, 20.70600.70730.6763N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.220.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
PLN02229427 PLN02229, PLN02229, alpha-galactosidase 0.0
PLN02808386 PLN02808, PLN02808, alpha-galactosidase 1e-173
PLN02692412 PLN02692, PLN02692, alpha-galactosidase 1e-154
PLN03231357 PLN03231, PLN03231, putative alpha-galactosidase; 9e-25
pfam02065395 pfam02065, Melibiase, Melibiase 1e-23
PLN02899 633 PLN02899, PLN02899, alpha-galactosidase 9e-22
COG3345687 COG3345, GalA, Alpha-galactosidase [Carbohydrate t 3e-04
>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase Back     alignment and domain information 
 Score =  626 bits (1615), Expect = 0.0
 Identities = 271/331 (81%), Positives = 292/331 (88%), Gaps = 8/331 (2%)

Query: 34  LVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQM 93
           L LS+++    AGRV  PLLQS         FS++F  I+DTS YG LQLNNGLA TPQM
Sbjct: 14  LSLSVLVSQSIAGRVKAPLLQSV--------FSKSFNSIYDTSMYGRLQLNNGLARTPQM 65

Query: 94  GWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTIT 153
           GWNSWNFFACNI+ET+IKETADALVSTGLA+LGY HVNIDDCWS+  RD KGQLVPD  T
Sbjct: 66  GWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKT 125

Query: 154 FPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNC 213
           FPSGIK LADYVH KGLKLGIYSDAGVFTCQVRPGSLFHE DDA +FASWGVDYLKYDNC
Sbjct: 126 FPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNC 185

Query: 214 FNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWAS 273
           +NLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWAGKVGNSWRTT DINDTWAS
Sbjct: 186 YNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWAS 245

Query: 274 MTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRN 333
           MT+IAD+N+KWA+YAGPGGWNDPDMLEVGNGGM+Y+EYR HFSIWALMKAPLLIGCDVRN
Sbjct: 246 MTTIADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRN 305

Query: 334 MTAETFEILSNKEVIAVNQDPLGVQGRKVFG 364
           MTAET EILSNKEVIAVNQDPLGVQGRK+  
Sbjct: 306 MTAETMEILSNKEVIAVNQDPLGVQGRKIQA 336

Length = 427
>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|216861 pfam02065, Melibiase, Melibiase Back     alignment and domain information
>gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 393
PLN02229427 alpha-galactosidase 100.0
PLN02692412 alpha-galactosidase 100.0
PLN02808386 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PLN02899 633 alpha-galactosidase 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 100.0
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 100.0
PLN02219 775 probable galactinol--sucrose galactosyltransferase 99.93
PLN02355 758 probable galactinol--sucrose galactosyltransferase 99.93
PLN02684 750 Probable galactinol--sucrose galactosyltransferase 99.91
PF05691 747 Raffinose_syn: Raffinose synthase or seed imbibiti 99.89
PLN02711 777 Probable galactinol--sucrose galactosyltransferase 99.89
PLN02982 865 galactinol-raffinose galactosyltransferase/ghydrol 99.75
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.72
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.45
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 99.4
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 99.34
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 99.22
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 99.18
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 99.15
PRK10658665 putative alpha-glucosidase; Provisional 99.11
cd06595292 GH31_xylosidase_XylS-like This family represents a 99.1
cd06600317 GH31_MGAM-like This family includes the following 99.09
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 99.08
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 99.07
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 99.02
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 98.95
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 98.94
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 98.92
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 98.9
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 98.82
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.65
PRK10426635 alpha-glucosidase; Provisional 98.54
KOG1065 805 consensus Maltase glucoamylase and related hydrola 97.66
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 96.64
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 94.31
PF13200316 DUF4015: Putative glycosyl hydrolase domain 92.42
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 90.22
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 89.84
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 89.7
COG0296 628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 86.28
TIGR02402 542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 84.84
TIGR02104 605 pulA_typeI pullulanase, type I. Pullulan is an unu 84.69
PRK14706 639 glycogen branching enzyme; Provisional 84.18
PF14488166 DUF4434: Domain of unknown function (DUF4434) 83.87
PRK14705 1224 glycogen branching enzyme; Provisional 82.08
PLN02960 897 alpha-amylase 81.16
TIGR02456 539 treS_nterm trehalose synthase. Trehalose synthase 80.4
>PLN02229 alpha-galactosidase Back     alignment and domain information 
Probab=100.00  E-value=2.9e-95  Score=734.45  Aligned_cols=352  Identities=78%  Similarity=1.285  Sum_probs=323.9

Q ss_pred             eeeeeeeeccccccccccccccCceecccccchhHHhhhHhhhhcccchhcccCCCCCCCceEEechhhhCCCCCHHHHH
Q 016207           32 FALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIK  111 (393)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~GwnSW~~~~~~i~e~~i~  111 (393)
                      +.|+++++.|...+.+.......+.        .++.+-.++....+....++++++++||||||||+.|+|+|||+.|+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ngla~tPpmGWnSWn~~~~~i~E~~i~   83 (427)
T PLN02229         12 LLLSLSVLVSQSIAGRVKAPLLQSV--------FSKSFNSIYDTSMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIK   83 (427)
T ss_pred             HHHHHHhhcchhhhhhhcccccccc--------chhhhhhhhhhhhhhhhhccCCccCCCCceEEchhhhCcccCHHHHH
Confidence            3344444566666666665555554        33555566666666667778999999999999999999999999999


Q ss_pred             HHHHHHHHcCCcccCceEEEeCCCcCCCCCCCCCCccccCCCCCCCHHHHHHHHHHcCCeEEEEeeCCccccCCCCcccc
Q 016207          112 ETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLF  191 (393)
Q Consensus       112 ~~ad~~~~~gl~~~G~~~~~IDDGW~~~~rd~~G~~~~d~~kFP~Gl~~l~d~vh~~Gmk~Glw~~pg~~~c~~~pgs~~  191 (393)
                      ++||+|+++||+++||+||+|||||+...||++|+|++|++|||+|||+|+||||++|||||||.++|..+|..+||+++
T Consensus        84 ~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~~pGS~g  163 (427)
T PLN02229         84 ETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLF  163 (427)
T ss_pred             HHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCCCCCCcc
Confidence            99999999999999999999999999878999999999999999999999999999999999999999999999999999


Q ss_pred             cHHhHHHHHHHcCCcEEEeecCCCCCCCccccchHHHHHHHhcCCCceeeccCCCCCChhhhhhhccceeeecCCCCCCh
Q 016207          192 HEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTW  271 (393)
Q Consensus       192 ~~~~~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~m~~AL~~agr~i~~slc~~g~~~P~~w~~~~~n~~Ris~Di~~~W  271 (393)
                      |++.++++|++|||||||+|+|+.....+.++|..|++||+++||||+||+|+||...|+.|..+++|+||+++||.+.|
T Consensus       164 ~e~~DA~~fA~WGVDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W  243 (427)
T PLN02229        164 HEVDDADIFASWGVDYLKYDNCYNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTW  243 (427)
T ss_pred             HHHHHHHHHHHcCCCEEEecCCCCCCcchhHHHHHHHHHHHhhCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCccccc
Confidence            99999999999999999999998877777889999999999999999999999999889999999999999999999999


Q ss_pred             hHHHHHHHhhcccccccCCCCccCCCcccccCCCcChhhhhhHHHHHHHhcCceeecCCCCCCCHHHHHhcCChhhHhhc
Q 016207          272 ASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN  351 (393)
Q Consensus       272 ~~~~~~~~~~~~~~~~~gpg~wnDpDmL~vg~~~lT~~E~rt~~slwa~~gsPLlig~Dl~~l~~~~~~lL~N~eviain  351 (393)
                      +++..+++.+..|+.+++||+|||||||+||+.++|.+|+||||+||||++|||++|+|+++++++.++||+|+||||||
T Consensus       244 ~sv~~i~~~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~~SPLiiG~DL~~m~~~tl~ILtNkEVIAIN  323 (427)
T PLN02229        244 ASMTTIADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVN  323 (427)
T ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCceeecCCcccCCHHHHHHhcCHHHHhhc
Confidence            99999999888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcceEeeeeccCCceEEEE--ccCCCeEEEEeccCCC
Q 016207          352 QDPLGVQGRKVFGWVLCLDIAWWL--LSGIDVQKLKLSQHNG  391 (393)
Q Consensus       352 QD~lg~~~~~v~~~~~~~d~~~w~--~~~~~~~~~~~~~~~~  391 (393)
                      ||++|++|++|.....+.+.|+|.  |++++++|++|||.++
T Consensus       324 QD~lG~qg~~v~~~~~~~~~~vW~~~L~~g~~aValfN~~~~  365 (427)
T PLN02229        324 QDPLGVQGRKIQANGKNGCQQVWAGPLSGDRLVVALWNRCSE  365 (427)
T ss_pred             ccccccCcEEEEecCCCCceEEEEEECCCCCEEEEEEeCCCC
Confidence            999999999998866556799997  9999999999999875

>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
1uas_A362 Crystal Structure Of Rice Alpha-Galactosidase Lengt 1e-116
3a5v_A397 Crystal Structure Of Alpha-Galactosidase I From Mor 5e-74
1ktb_A405 The Structure Of Alpha-N-Acetylgalactosaminidase Le 2e-73
3lrk_A 479 Structure Of Alfa-Galactosidase (Mel1) From Sacchar 2e-68
3lrm_A 479 Structure Of Alfa-Galactosidase From Saccharomyces 2e-67
1r46_A398 Structure Of Human Alpha-galactosidase Length = 398 4e-65
3lx9_A404 Interconversion Of Human Lysosomal Enzyme Specifici 1e-64
3h53_A400 Crystal Structure Of Human Alpha-N-Acetylgalactosam 2e-64
3hg3_A404 Human Alpha-Galactosidase Catalytic Mechanism 2. Su 3e-64
1szn_A417 The Structure Of Alpha-Galactosidase Length = 417 5e-59
3a21_A 614 Crystal Structure Of Streptomyces Avermitilis Beta- 1e-49
3cc1_A433 Crystal Structure Of A Putative Alpha-N-Acetylgalac 3e-17
>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  414 bits (1064), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/281 (70%), Positives = 225/281 (80%), Gaps = 1/281 (0%)
Query: 83  LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
             NGL  TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+   RD
Sbjct: 1   FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD 60
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFA 201
            +G  VP+  TFPSGIKALADYVH KGLKLGIYSDAG  TC  + PGSL HE+ D   FA
Sbjct: 61  SQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFA 120
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
           SWGVDYLKYDNC + G    +RY  M +A+   G +IF+SLCEWG ++PA WAG++GNSW
Sbjct: 121 SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSW 180
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
           RTTGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS  EYR+HFSIWAL 
Sbjct: 181 RTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA 240
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKV 362
           KAPLLIGCDVR+M+ +T  ILSN EVIAVNQD LGVQG+KV
Sbjct: 241 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKV 281
>pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 Back     alignment and structure
>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 Back     alignment and structure
>pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 Back     alignment and structure
>pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 Back     alignment and structure
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 Back     alignment and structure
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 Back     alignment and structure
>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 Back     alignment and structure
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 Back     alignment and structure
>pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 Back     alignment and structure
>pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 Back     alignment and structure
>pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 1e-146
3lrk_A 479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 1e-119
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-118
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 1e-117
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 1e-117
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 1e-109
1ktb_A405 Alpha-N-acetylgalactosaminidase; glycoprotein, (be 1e-107
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 1e-102
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 3e-25
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 6e-19
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 3e-17
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 3e-15
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
 Score =  427 bits (1099), Expect = e-146
 Identities = 120/316 (37%), Positives = 159/316 (50%), Gaps = 20/316 (6%)

Query: 83  LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
                  +  MGW SWN FA  I  ++IK+  DA V+ GL   GY ++NID+ W    RD
Sbjct: 4   TRQITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63

Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC----------QVRPGSLFH 192
             G +  DT  +P G+ A+  Y+H KGLK GIY+DAG   C              GS  H
Sbjct: 64  SAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGH 123

Query: 193 EKDDAPLFASWGVDYLKYDNCFN--LGIEPKKRYPPMRDA----LNETGCSIFYSLCEWG 246
              D   F++WG D++K D C     G++    Y  + DA       TG  +  S+C WG
Sbjct: 124 YDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGRAAATTGRPLTLSICNWG 183

Query: 247 VDDPALWAGKVGNSWRTTGDIN--DTWASMTSIADINDK--WASYAGPGGWNDPDMLEVG 302
             +P  WA      WRT+ DI       SMTS+    D+    +    G +NDPDML VG
Sbjct: 184 YQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLLSNFDQTLHPTAQHTGYYNDPDMLMVG 243

Query: 303 NGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKV 362
             G +  + R H ++WA+  APLL G D+  MT+ET  IL N EVIAV+QD  G+QG KV
Sbjct: 244 MDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQGVKV 303

Query: 363 FGWVLCLDIAWWLLSG 378
                 L     +LSG
Sbjct: 304 AEDTTGLQAYGKVLSG 319
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 Back     alignment and structure
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Length = 641 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
3lrk_A 479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 100.0
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 100.0
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 100.0
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.78
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.43
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 99.42
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 99.29
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 99.28
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 99.18
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 99.14
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 99.09
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 99.08
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 98.41
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 97.82
3ues_A 478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 92.53
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 91.46
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 90.23
3zss_A 695 Putative glucanohydrolase PEP1A; alpha-glucan bios 90.18
3eyp_A 469 Putative alpha-L-fucosidase; structural genomics, 89.71
2bhu_A 602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 89.46
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 88.65
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 87.91
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 87.68
3edf_A 601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 87.09
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 86.67
3vgf_A 558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 86.35
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 84.92
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 84.73
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 83.11
4aie_A 549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 82.93
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 80.99
3gza_A443 Putative alpha-L-fucosidase; NP_812709.1, structur 80.51
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 80.46
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
Probab=100.00  E-value=1e-87  Score=689.31  Aligned_cols=311  Identities=44%  Similarity=0.820  Sum_probs=293.4

Q ss_pred             hhcccCCCCCCCceEEechhhhCCCCCHHHHHHHHHHHHHcCCcccCceEEEeCCCcCCCCCCCCCCccccCCCCCCCHH
Q 016207           80 ILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIK  159 (393)
Q Consensus        80 ~~~~~~~~~~~pp~GwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~IDDGW~~~~rd~~G~~~~d~~kFP~Gl~  159 (393)
                      ..++.|+++++||||||||+.|+|++||+.|+++||+|++.||+++||+||+|||||+. .||.+|+|.+|++|||+||+
T Consensus        19 ~~a~~ngla~tPpmGWNSW~~~~~~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~-~rd~~G~~~~d~~kFP~Glk   97 (479)
T 3lrk_A           19 VSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSS-GRDSDGFLVADEQKFPNGMG   97 (479)
T ss_dssp             CCCCSSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEE-EECTTSCEEECTTTCTTCHH
T ss_pred             hhhhhCCCCCCCceEEEchHhhCcCCCHHHHHHHHHHHHhcCccccCceEEEECCcccc-ccCCCCCEecChhhcCCCHH
Confidence            34567899999999999999999999999999999999999999999999999999998 78999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEeeCCccccCCCCcccccHHhHHHHHHHcCCcEEEeecCCCCCCC-----ccccchHHHHHHHhc
Q 016207          160 ALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE-----PKKRYPPMRDALNET  234 (393)
Q Consensus       160 ~l~d~vh~~Gmk~Glw~~pg~~~c~~~pgs~~~~~~~~~~~~~wGvdylK~D~~~~~~~~-----~~~~y~~m~~AL~~a  234 (393)
                      +|++|||++|||||||++||..+|.++||+++|++.++++|++|||||||+|+|+.....     ..++|..|++||+++
T Consensus        98 ~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL~~t  177 (479)
T 3lrk_A           98 HVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKT  177 (479)
T ss_dssp             HHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999875432     257899999999999


Q ss_pred             CCCceeeccCCCCCChhhhhhhccceeeecCCCCCChh----------------------HHHHHHHhhcccccccCCCC
Q 016207          235 GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWA----------------------SMTSIADINDKWASYAGPGG  292 (393)
Q Consensus       235 gr~i~~slc~~g~~~P~~w~~~~~n~~Ris~Di~~~W~----------------------~~~~~~~~~~~~~~~~gpg~  292 (393)
                      ||||+||+|+||...|..|..+++|+||+++||.+.|+                      ++..+++.+..|+.+++||+
T Consensus       178 GRpI~~Slc~Wg~~~~~~w~~~~~n~WR~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~~sv~~i~~~~~~~~~~agpG~  257 (479)
T 3lrk_A          178 GRPVFYSLCNWGQDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKAAPMGQNAGVGG  257 (479)
T ss_dssp             CSCCEEEECSTTTTTHHHHSTTTCSEEECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSCBCHHHHHHHHGGGGGGCBTTB
T ss_pred             CCCeEEEeccCccCchhhhhhhhCCeeeecCCccccccccccccccccccccccccccchhHHHHHHHhhhhhhccCCCC
Confidence            99999999999988899999999999999999999997                      57888898889999999999


Q ss_pred             ccCCCcccccCCCcChhhhhhHHHHHHHhcCceeecCCCCCCCHHHHHhcCChhhHhhcCCCCCCcceEeeeecc-----
Q 016207          293 WNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVFGWVL-----  367 (393)
Q Consensus       293 wnDpDmL~vg~~~lT~~E~rt~~slwa~~gsPLlig~Dl~~l~~~~~~lL~N~eviainQD~lg~~~~~v~~~~~-----  367 (393)
                      |||||||+||+++||.+|+||||++|||++|||++|+|+++++++.++||+|+||||||||++|+|+++|.++..     
T Consensus       258 wNDpDML~vGn~glT~~E~rthfslWai~~SPLiiG~DL~~~~~~tl~iLtN~evIAINQD~lG~q~~~v~~~~~~~~d~  337 (479)
T 3lrk_A          258 WNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQASVIAINQDSNGIPATRVWRYYVSDTDE  337 (479)
T ss_dssp             EEECCSBCTTSTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEEECSCCCT
T ss_pred             CCCCCeEeeCCCCCCHHHHHHHHHHHHHHcCceEecCCcccCCHHHHHHhcCHHHHHHhccccCCceEEEeeccCccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999987421     


Q ss_pred             --CCceEEEE--ccCCCeEEEEeccCCC
Q 016207          368 --CLDIAWWL--LSGIDVQKLKLSQHNG  391 (393)
Q Consensus       368 --~~d~~~w~--~~~~~~~~~~~~~~~~  391 (393)
                        .++.|+|.  |++|+++|++|||.+.
T Consensus       338 ~~~~~~~VW~~~l~~G~~aValfN~~~~  365 (479)
T 3lrk_A          338 YGQGEIQMWSGPLDNGDQVVALLNGGSV  365 (479)
T ss_dssp             TSCCEEEEEEEECTTSCEEEEEEECSSS
T ss_pred             cCCCCcEEEEEECCCCCEEEEEEECCCC
Confidence              35799997  9999999999999875
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 393
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 1e-103
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 1e-102
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 1e-100
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 3e-91
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 3e-57
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score =  304 bits (780), Expect = e-103
 Identities = 191/271 (70%), Positives = 217/271 (80%), Gaps = 1/271 (0%)

Query: 84  NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL 143
            NGL  TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+   RD 
Sbjct: 2   ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDS 61

Query: 144 KGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFAS 202
           +G  VP+  TFPSGIKALADYVH KGLKLGIYSDAG  TC  + PGSL HE+ D   FAS
Sbjct: 62  QGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFAS 121

Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
           WGVDYLKYDNC + G    +RY  M +A+   G +IF+SLCEWG ++PA WAG++GNSWR
Sbjct: 122 WGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWR 181

Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
           TTGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS  EYR+HFSIWAL K
Sbjct: 182 TTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAK 241

Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQD 353
           APLLIGCDVR+M+ +T  ILSN EVIAVNQD
Sbjct: 242 APLLIGCDVRSMSQQTKNILSNSEVIAVNQD 272
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.41
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 97.37
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 97.13
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 96.86
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.13
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 91.51
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 91.2
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 91.18
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 90.64
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 89.1
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 88.69
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 88.05
d1g5aa2 554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 87.89
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 86.62
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 86.44
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 86.26
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 85.98
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 85.05
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 84.8
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 84.32
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 83.84
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 83.66
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 82.47
d1to3a_291 Putative aldolase YihT {Salmonella typhimurium [Ta 81.59
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 81.45
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=100.00  E-value=6.3e-71  Score=528.81  Aligned_cols=271  Identities=70%  Similarity=1.226  Sum_probs=260.6

Q ss_pred             cCCCCCCCceEEechhhhCCCCCHHHHHHHHHHHHHcCCcccCceEEEeCCCcCCCCCCCCCCccccCCCCCCCHHHHHH
Q 016207           84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALAD  163 (393)
Q Consensus        84 ~~~~~~~pp~GwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~IDDGW~~~~rd~~G~~~~d~~kFP~Gl~~l~d  163 (393)
                      +||+++|||||||||++|+++|||+.|+++|++++++||+++||+||+|||||+...+|..|+|++|++|||+|||+|++
T Consensus         2 ~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~~   81 (273)
T d1uasa2           2 ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALAD   81 (273)
T ss_dssp             CSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHH
T ss_pred             CCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHHH
Confidence            68999999999999999999999999999999999999999999999999999998888899999999999999999999


Q ss_pred             HHHHcCCeEEEEeeCCccccC-CCCcccccHHhHHHHHHHcCCcEEEeecCCCCCCCccccchHHHHHHHhcCCCceeec
Q 016207          164 YVHGKGLKLGIYSDAGVFTCQ-VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSL  242 (393)
Q Consensus       164 ~vh~~Gmk~Glw~~pg~~~c~-~~pgs~~~~~~~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~m~~AL~~agr~i~~sl  242 (393)
                      ++|++|||||||++|+...|. .+|+++.|++.++++|++|||||||+|+|........++|..+.++|++++|++++++
T Consensus        82 ~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~  161 (273)
T d1uasa2          82 YVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSL  161 (273)
T ss_dssp             HHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCCeEEEecCCcccccCCCCCcchhhHHHHHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcEEee
Confidence            999999999999999998884 5899999999999999999999999999998888888899999999999999999999


Q ss_pred             cCCCCCChhhhhhhccceeeecCCCCCChhHHHHHHHhhcccccccCCCCccCCCcccccCCCcChhhhhhHHHHHHHhc
Q 016207          243 CEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK  322 (393)
Q Consensus       243 c~~g~~~P~~w~~~~~n~~Ris~Di~~~W~~~~~~~~~~~~~~~~~gpg~wnDpDmL~vg~~~lT~~E~rt~~slwa~~g  322 (393)
                      |.++...+..+..+++|+||+++|+.+.|+++..+++.+..++.++++++|+||||++++++++|.+|.|+||++|||++
T Consensus       162 ~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~~  241 (273)
T d1uasa2         162 CEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAK  241 (273)
T ss_dssp             ESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHHh
Confidence            99988888888889999999999999999999999988888888999999999999999999999999999999999999


Q ss_pred             CceeecCCCCCCCHHHHHhcCChhhHhhcCCC
Q 016207          323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDP  354 (393)
Q Consensus       323 sPLlig~Dl~~l~~~~~~lL~N~eviainQD~  354 (393)
                      |||++|+|+++++++.+++|+|+|+||||||+
T Consensus       242 ~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd~  273 (273)
T d1uasa2         242 APLLIGCDVRSMSQQTKNILSNSEVIAVNQDS  273 (273)
T ss_dssp             CCEEECSCTTSCCHHHHHHHTCHHHHHHHTCT
T ss_pred             chhhhcCCcccCCHHHHHHhcCHHHHhhccCC
Confidence            99999999999999999999999999999994
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure