Citrus Sinensis ID: 016226

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM
cccccccccccccccccccEEEccccccccccccccccccccccccccEEEcccccccccccccEEEEEEEEccccEEEEHHHHHccccEEEEEEEEccccccccccccccccccccccccEEccEEccccHHHHHHHccccccccccccccEEEEEEEcccccccccccEEEEEEcHHHccccccEEEEEEccccccccccccccEEEccccccccEEEEEcEEEEEccccccEEEccccccccccccccccccccccccccEEccEEEEEcccccccccccEEEEEEEEEcccccEEEEEEEcccccccEEEEccccccccccccccccccEEEEEEEEEEEcccEEEEEEEEEEcccccccccccccccccccccccEEEEEEEEccccc
ccccccccccccccccccEEEEcccccccccccHHHHHcccccccccEEEEcccccccccccccEEEEEEEcccccEEEcHHHHHHccccEEEEEEEEccccHHHHHHHHccccccccccHEcccccccccHHHHHHHccccccccccccccEEEEEEccccccccccccccccEcHHHcccccccEEEEEEcccccccccccccEEEEEcccEccHHHHHHEEEEEEcccccccEEEcccccccccccHHHccccccHHHHcccccEEEEccccccEEccccEEEEEEEEcccccEEEEEEEEEccccEEEEEEEccccccccccccccccEEEEEEEEEEEccccHcHEEEEEHHcHcccccccccHHHHHHHHccccEEEEEEEEccccc
mpgltapssysqepprhpilqinskepfnaepprsalissyvtpvdffykrnhgpipivddiESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLElvgipnltsvtrsggkhvefvsidkckeenggpykasiplsqatnpeADVLLAYEmngeplnrdhgyplrvvVPGVIGARSVKWLDTINILAEECQgffmqkdykmfppsvnwdninwksrrplmdfpVQCVICSledvnvmkpgkakVSGYavsgggrgiervdisvdggknWVEASRYQktgipyiadhmssdKWAWVFFEVIIDIPHSTQIVAKAVDtaanvqpesVETIWNLRGVLNTSWHRVQVRVGHSNM
mpgltapssysqepprhPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNltsvtrsggkhveFVSIDKCKEENGGPYkasiplsqatNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEdvnvmkpgKAKVSgyavsgggrgiervdisvdggknWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVlntswhrvqvrvghsnm
MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM
************************************LISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKC*********************ADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRV*****
****TAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG*S**
**************PRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM
******PSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG****
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MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query393 2.2.26 [Sep-21-2011]
Q9S850393 Sulfite oxidase OS=Arabid yes no 1.0 1.0 0.783 0.0
Q8R086546 Sulfite oxidase, mitochon yes no 0.946 0.681 0.447 2e-83
Q07116546 Sulfite oxidase, mitochon yes no 0.946 0.681 0.445 3e-83
P07850459 Sulfite oxidase OS=Gallus yes no 0.916 0.784 0.458 8e-83
Q60HD0545 Sulfite oxidase, mitochon N/A no 0.949 0.684 0.443 9e-81
P51687545 Sulfite oxidase, mitochon yes no 0.946 0.682 0.439 3e-80
Q9VWP4573 Probable sulfite oxidase, yes no 0.923 0.633 0.418 4e-80
P27968 891 Nitrate reductase [NAD(P) N/A no 0.908 0.400 0.335 9e-54
P39866 890 Nitrate reductase [NADH] N/A no 0.890 0.393 0.332 2e-53
P39869 900 Nitrate reductase [NADH] N/A no 0.903 0.394 0.334 2e-52
>sp|Q9S850|SUOX_ARATH Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1 Back     alignment and function desciption
 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/393 (78%), Positives = 351/393 (89%)

Query: 1   MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
           MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD
Sbjct: 1   MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60

Query: 61  DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
            ++SY V++ GLI+N + LF++DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVS
Sbjct: 61  HLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVS 120

Query: 121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
           AIGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQA
Sbjct: 121 AIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQA 180

Query: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
           TNPEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSVKWLD+IN++AEE QGFFMQKD
Sbjct: 181 TNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKD 240

Query: 241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
           YKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIER
Sbjct: 241 YKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIER 300

Query: 301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
           VDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AA
Sbjct: 301 VDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAA 360

Query: 361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
           NVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct: 361 NVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393
Probably involved in sulfite oxidative detoxification.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 8EC: .EC: 3EC: .EC: 1
>sp|Q8R086|SUOX_MOUSE Sulfite oxidase, mitochondrial OS=Mus musculus GN=Suox PE=1 SV=2 Back     alignment and function description
>sp|Q07116|SUOX_RAT Sulfite oxidase, mitochondrial OS=Rattus norvegicus GN=Suox PE=1 SV=2 Back     alignment and function description
>sp|P07850|SUOX_CHICK Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3 Back     alignment and function description
>sp|Q60HD0|SUOX_MACFA Sulfite oxidase, mitochondrial OS=Macaca fascicularis GN=SUOX PE=2 SV=3 Back     alignment and function description
>sp|P51687|SUOX_HUMAN Sulfite oxidase, mitochondrial OS=Homo sapiens GN=SUOX PE=1 SV=2 Back     alignment and function description
>sp|Q9VWP4|SUOX_DROME Probable sulfite oxidase, mitochondrial OS=Drosophila melanogaster GN=CG7280 PE=2 SV=1 Back     alignment and function description
>sp|P27968|NIA7_HORVU Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1 Back     alignment and function description
>sp|P39866|NIA2_PHAVU Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1 Back     alignment and function description
>sp|P39869|NIA_LOTJA Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
255536913393 sulfite reductase, putative [Ricinus com 1.0 1.0 0.849 0.0
224060247393 predicted protein [Populus trichocarpa] 1.0 1.0 0.839 0.0
255762690393 sulfite oxidase [Hibiscus cannabinus] 1.0 1.0 0.826 0.0
82941457396 sulfite oxidase [Codonopsis lanceolata] 1.0 0.992 0.844 0.0
359358706393 sulfite oxidase [Nicotiana benthamiana] 1.0 1.0 0.819 0.0
82621174393 sulfite oxidase-like [Solanum tuberosum] 1.0 1.0 0.811 0.0
356571356393 PREDICTED: sulfite oxidase-like [Glycine 1.0 1.0 0.809 0.0
449443347393 PREDICTED: sulfite oxidase-like [Cucumis 1.0 1.0 0.819 0.0
350534980393 sulfite oxidase [Solanum lycopersicum] g 1.0 1.0 0.806 0.0
297828558393 hypothetical protein ARALYDRAFT_896052 [ 1.0 1.0 0.788 0.0
>gi|255536913|ref|XP_002509523.1| sulfite reductase, putative [Ricinus communis] gi|223549422|gb|EEF50910.1| sulfite reductase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/393 (84%), Positives = 364/393 (92%)

Query: 1   MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
           MPG+  PS YSQ+PPRHP L+INSK+PFNAEPPRS L +SY+TP+DFFYKRNHGPIP+VD
Sbjct: 1   MPGIKGPSDYSQDPPRHPSLKINSKQPFNAEPPRSVLANSYITPMDFFYKRNHGPIPVVD 60

Query: 61  DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
           DIE Y VSICGLI NSK+LFMRDI  L KYN+TATLQCAGNRRTAMS+V+ V+GVGWDVS
Sbjct: 61  DIERYSVSICGLIGNSKELFMRDIWKLPKYNVTATLQCAGNRRTAMSDVKKVRGVGWDVS 120

Query: 121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
           AIGNAVW GAKLADVLELVGI  LTS+T+SGGKHVEFVSIDKCKEENGGPYKASIPLSQA
Sbjct: 121 AIGNAVWGGAKLADVLELVGISKLTSMTKSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180

Query: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
           TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLD+INI+AEECQGFFMQKD
Sbjct: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDSINIIAEECQGFFMQKD 240

Query: 241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
           YKMFPPSVNWDNINW +RRP MDFPVQC ICSLEDV  +KPGK KVSGYA SGGGRGIER
Sbjct: 241 YKMFPPSVNWDNINWSTRRPQMDFPVQCAICSLEDVTTVKPGKVKVSGYAASGGGRGIER 300

Query: 301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
           VD+SVDGGK W+EASR+QKTG+PYI+D M +DKWAWV FEV +D+PHST+IVAKAVD+AA
Sbjct: 301 VDVSVDGGKTWMEASRHQKTGVPYISDDMYNDKWAWVLFEVTLDVPHSTKIVAKAVDSAA 360

Query: 361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
           NVQPESVE IWNLRG+LNTSWHRVQVRVGHSNM
Sbjct: 361 NVQPESVEDIWNLRGILNTSWHRVQVRVGHSNM 393

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224060247|ref|XP_002300104.1| predicted protein [Populus trichocarpa] gi|222847362|gb|EEE84909.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255762690|gb|ACU33027.1| sulfite oxidase [Hibiscus cannabinus] Back     alignment and taxonomy information
>gi|82941457|dbj|BAE48793.1| sulfite oxidase [Codonopsis lanceolata] Back     alignment and taxonomy information
>gi|359358706|gb|AEV40816.1| sulfite oxidase [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|82621174|gb|ABB86275.1| sulfite oxidase-like [Solanum tuberosum] Back     alignment and taxonomy information
>gi|356571356|ref|XP_003553844.1| PREDICTED: sulfite oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|449443347|ref|XP_004139441.1| PREDICTED: sulfite oxidase-like [Cucumis sativus] gi|449523287|ref|XP_004168655.1| PREDICTED: sulfite oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|350534980|ref|NP_001234681.1| sulfite oxidase [Solanum lycopersicum] gi|114186917|gb|ABI53846.1| sulfite oxidase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|297828558|ref|XP_002882161.1| hypothetical protein ARALYDRAFT_896052 [Arabidopsis lyrata subsp. lyrata] gi|297328001|gb|EFH58420.1| hypothetical protein ARALYDRAFT_896052 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query393
TAIR|locus:2078683393 SOX "sulfite oxidase" [Arabido 1.0 1.0 0.783 5.9e-176
UNIPROTKB|P07850459 SUOX "Sulfite oxidase" [Gallus 0.926 0.793 0.454 1.2e-87
MGI|MGI:2446117546 Suox "sulfite oxidase" [Mus mu 0.946 0.681 0.447 6.9e-86
UNIPROTKB|F1PVD4693 SUOX "Uncharacterized protein" 0.941 0.533 0.452 1.8e-85
RGD|619994546 Suox "sulfite oxidase" [Rattus 0.946 0.681 0.447 3e-85
UNIPROTKB|Q07116546 Suox "Sulfite oxidase, mitocho 0.946 0.681 0.447 3e-85
DICTYBASE|DDB_G0278893398 suox "sulfite oxidase" [Dictyo 0.933 0.922 0.432 1.9e-83
UNIPROTKB|P51687545 SUOX "Sulfite oxidase, mitocho 0.946 0.682 0.439 3.1e-83
UNIPROTKB|F6RUR3547 SUOX "Uncharacterized protein" 0.941 0.676 0.437 2.5e-81
UNIPROTKB|I3LLT5544 SUOX "Uncharacterized protein" 0.936 0.676 0.425 9.7e-80
TAIR|locus:2078683 SOX "sulfite oxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1709 (606.7 bits), Expect = 5.9e-176, P = 5.9e-176
 Identities = 308/393 (78%), Positives = 351/393 (89%)

Query:     1 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
             MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD
Sbjct:     1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60

Query:    61 DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
              ++SY V++ GLI+N + LF++DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVS
Sbjct:    61 HLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVS 120

Query:   121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
             AIGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQA
Sbjct:   121 AIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQA 180

Query:   181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
             TNPEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSVKWLD+IN++AEE QGFFMQKD
Sbjct:   181 TNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKD 240

Query:   241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
             YKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIER
Sbjct:   241 YKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIER 300

Query:   301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
             VDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AA
Sbjct:   301 VDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAA 360

Query:   361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
             NVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct:   361 NVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0006790 "sulfur compound metabolic process" evidence=ISS;IDA
GO:0008482 "sulfite oxidase activity" evidence=ISS;IDA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0030151 "molybdenum ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005777 "peroxisome" evidence=IDA
GO:0010477 "response to sulfur dioxide" evidence=IMP
GO:0015994 "chlorophyll metabolic process" evidence=IMP
GO:0005829 "cytosol" evidence=RCA
UNIPROTKB|P07850 SUOX "Sulfite oxidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2446117 Suox "sulfite oxidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PVD4 SUOX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|619994 Suox "sulfite oxidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q07116 Suox "Sulfite oxidase, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0278893 suox "sulfite oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P51687 SUOX "Sulfite oxidase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F6RUR3 SUOX "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LLT5 SUOX "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S850SUOX_ARATH1, ., 8, ., 3, ., 10.78371.01.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.3.10.979
3rd Layer1.8.30.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
PLN00177393 PLN00177, PLN00177, sulfite oxidase; Provisional 0.0
cd02111365 cd02111, eukary_SO_Moco, molybdopterin binding dom 0.0
cd02110317 cd02110, SO_family_Moco_dimer, Subgroup of sulfite 1e-114
cd02112386 cd02112, eukary_NR_Moco, molybdopterin binding dom 3e-88
PLN02252 888 PLN02252, PLN02252, nitrate reductase [NADPH] 8e-74
cd00321156 cd00321, SO_family_Moco, Sulfite oxidase (SO) fami 5e-57
pfam00174144 pfam00174, Oxidored_molyb, Oxidoreductase molybdop 4e-51
cd02114367 cd02114, bact_SorA_Moco, sulfite:cytochrome c oxid 6e-41
pfam03404130 pfam03404, Mo-co_dimer, Mo-co oxidoreductase dimer 1e-38
cd02113326 cd02113, bact_SoxC_Moco, bacterial SoxC is a membe 3e-33
COG2041271 COG2041, COG2041, Sulfite oxidase and related enzy 2e-29
cd02109180 cd02109, arch_bact_SO_family_Moco, bacterial and a 2e-20
cd02108185 cd02108, bact_SO_family_Moco, bacterial subgroup o 2e-15
PRK05363280 PRK05363, PRK05363, TMAO/DMSO reductase; Reviewed 1e-05
cd02107218 cd02107, YedY_like_Moco, YedY_like molybdopterin c 6e-05
>gnl|CDD|177772 PLN00177, PLN00177, sulfite oxidase; Provisional Back     alignment and domain information 
 Score =  806 bits (2083), Expect = 0.0
 Identities = 333/393 (84%), Positives = 360/393 (91%)

Query: 1   MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
           MPGL  PS YSQEPPRHP L+IN+KEPFNAEPPRSAL+SSY+TPVD FYKRNHGPIPIVD
Sbjct: 1   MPGLRGPSDYSQEPPRHPSLKINAKEPFNAEPPRSALVSSYITPVDLFYKRNHGPIPIVD 60

Query: 61  DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
           DIE Y V+I GLIEN + L M+DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVS
Sbjct: 61  DIERYSVTITGLIENPRKLSMKDIRKLPKYNVTATLQCAGNRRTAMSKVRKVRGVGWDVS 120

Query: 121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
           AIGNAVW GAKLADVLELVGIP LTS+T SGGKHVEFVS+DKCKEENGGPYKASIPLSQA
Sbjct: 121 AIGNAVWGGAKLADVLELVGIPKLTSITSSGGKHVEFVSVDKCKEENGGPYKASIPLSQA 180

Query: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
           TNPEADVLLAYEMNGE LNRDHGYPLRVVVPGVIGARSVKWLD+INI+AEECQGFFMQKD
Sbjct: 181 TNPEADVLLAYEMNGEVLNRDHGYPLRVVVPGVIGARSVKWLDSINIIAEECQGFFMQKD 240

Query: 241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
           YKMFPPSVNWDNINW +RRP MDFPVQ  ICSLEDVN +KPGK  V+GYA+SGGGRGIER
Sbjct: 241 YKMFPPSVNWDNINWSTRRPQMDFPVQSAICSLEDVNAIKPGKVTVAGYALSGGGRGIER 300

Query: 301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
           VDISVDGGK WVEASRYQK G+PYI+D +SSDKWAWV FE  +D+P ST+IVAKAVD+AA
Sbjct: 301 VDISVDGGKTWVEASRYQKPGVPYISDDISSDKWAWVLFEATVDVPQSTEIVAKAVDSAA 360

Query: 361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
           NVQPESVE+IWNLRG+LNTSWHRVQ+RVGHSNM
Sbjct: 361 NVQPESVESIWNLRGILNTSWHRVQLRVGHSNM 393

Length = 393
>gnl|CDD|239029 cd02111, eukary_SO_Moco, molybdopterin binding domain of sulfite oxidase (SO) Back     alignment and domain information
>gnl|CDD|239028 cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain Back     alignment and domain information
>gnl|CDD|239030 cd02112, eukary_NR_Moco, molybdopterin binding domain of eukaryotic nitrate reductase (NR) Back     alignment and domain information
>gnl|CDD|215141 PLN02252, PLN02252, nitrate reductase [NADPH] Back     alignment and domain information
>gnl|CDD|238198 cd00321, SO_family_Moco, Sulfite oxidase (SO) family, molybdopterin binding domain Back     alignment and domain information
>gnl|CDD|215768 pfam00174, Oxidored_molyb, Oxidoreductase molybdopterin binding domain Back     alignment and domain information
>gnl|CDD|239032 cd02114, bact_SorA_Moco, sulfite:cytochrome c oxidoreductase subunit A (SorA), molybdopterin binding domain Back     alignment and domain information
>gnl|CDD|217537 pfam03404, Mo-co_dimer, Mo-co oxidoreductase dimerisation domain Back     alignment and domain information
>gnl|CDD|239031 cd02113, bact_SoxC_Moco, bacterial SoxC is a member of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>gnl|CDD|224952 COG2041, COG2041, Sulfite oxidase and related enzymes [General function prediction only] Back     alignment and domain information
>gnl|CDD|239027 cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>gnl|CDD|239026 cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>gnl|CDD|235431 PRK05363, PRK05363, TMAO/DMSO reductase; Reviewed Back     alignment and domain information
>gnl|CDD|239025 cd02107, YedY_like_Moco, YedY_like molybdopterin cofactor (Moco) binding domain, a subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 393
KOG0535381 consensus Sulfite oxidase, molybdopterin-binding c 100.0
PLN00177393 sulfite oxidase; Provisional 100.0
cd02112386 eukary_NR_Moco molybdopterin binding domain of euk 100.0
cd02111365 eukary_SO_Moco molybdopterin binding domain of sul 100.0
PLN02252 888 nitrate reductase [NADPH] 100.0
cd02114367 bact_SorA_Moco sulfite:cytochrome c oxidoreductase 100.0
cd02113326 bact_SoxC_Moco bacterial SoxC is a member of the s 100.0
cd02110317 SO_family_Moco_dimer Subgroup of sulfite oxidase ( 100.0
cd02107218 YedY_like_Moco YedY_like molybdopterin cofactor (M 100.0
cd02108185 bact_SO_family_Moco bacterial subgroup of the sulf 100.0
PF00174169 Oxidored_molyb: Oxidoreductase molybdopterin bindi 100.0
cd02109180 arch_bact_SO_family_Moco bacterial and archael mem 100.0
PRK05363319 TMAO/DMSO reductase; Reviewed 100.0
cd00321156 SO_family_Moco Sulfite oxidase (SO) family, molybd 100.0
PF03404131 Mo-co_dimer: Mo-co oxidoreductase dimerisation dom 100.0
COG2041271 Sulfite oxidase and related enzymes [General funct 100.0
COG3915155 Uncharacterized protein conserved in bacteria [Fun 99.58
PF0201212 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Membe 95.79
PF1064888 Gmad2: Immunoglobulin-like domain of bacterial spo 88.86
PF15418132 DUF4625: Domain of unknown function (DUF4625) 85.61
PF1375454 Big_3_4: Bacterial Ig-like domain (group 3) 84.97
>KOG0535 consensus Sulfite oxidase, molybdopterin-binding component [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.6e-116  Score=831.17  Aligned_cols=376  Identities=52%  Similarity=0.938  Sum_probs=355.1

Q ss_pred             CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcccCCCCeEEEEEeccCCceeecH
Q 016226            2 PGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM   81 (393)
Q Consensus         2 ~~~~~~~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~~~~~~w~L~V~G~V~~p~~ltl   81 (393)
                      |+..+||.|.+||.|||.|.+++++|||||||++.|+++||||+++||+|||+++|.++. ++|+|+|+|++.+|++||+
T Consensus         1 p~~~~~d~~s~dp~Rhp~Lkv~~k~PFNAE~P~~~L~~~fiTP~~LfyvRNH~pVP~~~~-~~~~l~v~g~~~~~~~lt~   79 (381)
T KOG0535|consen    1 PSILDPDEYSQDPERHPALKVNSKRPFNAEPPPSLLTEHFITPNPLFYVRNHLPVPKIDP-EDYSLEVTGLGGKPRKLTL   79 (381)
T ss_pred             CCcCCccccccCcccCcceeccCCCCCCCCCChhHHHhhccCCcceeEeeccCCCCccCc-hhcEEEEEecCCCCceeeH
Confidence            456789999999999999999999999999999999999999999999999999999986 9999999999999999999


Q ss_pred             HHHhcCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEcc
Q 016226           82 RDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSID  161 (393)
Q Consensus        82 ~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D  161 (393)
                      +||+++|..+++++|+|+||||++|++++++.|+.|+.+||||+.|+|++|.|||++||+...    ..+++||.|+|+|
T Consensus        80 d~l~s~~k~~vtatl~CaGNRR~emn~vK~vkGl~W~~~aisna~W~GarL~DvL~~~Gi~~~----~~~a~hV~Fegad  155 (381)
T KOG0535|consen   80 DDLKSLPKYEVTATLQCAGNRRSEMNKVKKVKGLNWGSGAISNAVWGGARLCDVLRRAGIQSR----ETKALHVCFEGAD  155 (381)
T ss_pred             HHhhhhccccceEEEEecCccHHHHhhHhhhccccccccccccceecCccHHHHHHHhCCCcc----cCcceEEEEeccc
Confidence            999999999999999999999999999999999999999999999999999999999999864    2467899999999


Q ss_pred             CccccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeecc
Q 016226          162 KCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDY  241 (393)
Q Consensus       162 ~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y  241 (393)
                      .  ++.+..|.+|||+++||+|+.||||||+||||+|+++||||+|+||||..|+|+||||+||-|+.+|+++|||++||
T Consensus       156 ~--d~tg~pYgaSI~l~~A~dp~~dVilAY~mNge~L~rDHGfPvRVIVPG~vGaR~VKWL~rIiV~~kESds~~~qkDy  233 (381)
T KOG0535|consen  156 D--DPTGTPYGASIPLEKAMDPEADVILAYEMNGEPLPRDHGFPVRVIVPGVVGARMVKWLKRIIVTPKESDSHWQQKDY  233 (381)
T ss_pred             c--CCCCCcccccccHhhhcCcccceEEeeeecCccCCCCCCCceEEEecccccchhhhhhhheeeccccccchhhhccc
Confidence            5  44456899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcccCCCCCCCCccceeceEEEEEecCCCcccC--CcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCc
Q 016226          242 KMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKP--GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK  319 (393)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~--g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~  319 (393)
                      +.|+|.+++++.+|+..++|++|||+|+||.|.++..+++  |+++|+|||||||||+|.|||||+|||+||..|+|++.
T Consensus       234 k~f~psvd~d~~~w~~~p~iqe~pVqsaIctp~~~~~V~~~~~~vtikGYA~SGGGr~i~RVdvslDgG~tW~v~eldqe  313 (381)
T KOG0535|consen  234 KGFSPSVDWDEVDWSSKPSIQELPVQSAICTPEDGLPVKAFDGPVTIKGYAWSGGGRKIIRVDVSLDGGETWNVAELDQE  313 (381)
T ss_pred             ccCCCccCccccccccCchhhhcCcceeecccCCCceeccCCCceEEEEEEEeCCCceEEEEEEEecCCceeeeeecccc
Confidence            9999999999889999999999999999999999999997  78999999999999999999999999999999999988


Q ss_pred             CCCCccccCCCCCceeeEEeEEEEECCCc---cEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEee
Q 016226          320 TGIPYIADHMSSDKWAWVFFEVIIDIPHS---TQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH  390 (393)
Q Consensus       320 ~~~p~~~~~~~~~~~aW~~W~~~~~~~~~---~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~~  390 (393)
                      +. |.    .+ +.|||++|+.+++++.+   ..|++||+|++.|+|||....|||+||++||+||||++.|.+
T Consensus       314 e~-~~----~~-~~w~W~lw~a~v~V~~~~~~~~I~akAvD~a~NvQPe~~~~IWNlrGvl~nawhRV~~~v~~  381 (381)
T KOG0535|consen  314 EK-PD----KY-KFWAWCLWSAEVPVSDGQKEKNIIAKAVDSAYNVQPETVESIWNLRGVLNNAWHRVKVNVCK  381 (381)
T ss_pred             cc-CC----cc-ceEEEEEEEecccccccchhhhhHHHhhhhhhcCCcchhhhhhhHHHHhhhheeEEEeeecC
Confidence            75 21    11 58999999999998544   469999999999999999999999999999999999999864

>PLN00177 sulfite oxidase; Provisional Back     alignment and domain information
>cd02112 eukary_NR_Moco molybdopterin binding domain of eukaryotic nitrate reductase (NR) Back     alignment and domain information
>cd02111 eukary_SO_Moco molybdopterin binding domain of sulfite oxidase (SO) Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>cd02114 bact_SorA_Moco sulfite:cytochrome c oxidoreductase subunit A (SorA), molybdopterin binding domain Back     alignment and domain information
>cd02113 bact_SoxC_Moco bacterial SoxC is a member of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>cd02110 SO_family_Moco_dimer Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain Back     alignment and domain information
>cd02107 YedY_like_Moco YedY_like molybdopterin cofactor (Moco) binding domain, a subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>cd02108 bact_SO_family_Moco bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>PF00174 Oxidored_molyb: Oxidoreductase molybdopterin binding domain; InterPro: IPR000572 A number of different eukaryotic oxidoreductases that require and bind a molybdopterin cofactor have been shown [] to share a few regions of sequence similarity Back     alignment and domain information
>cd02109 arch_bact_SO_family_Moco bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains Back     alignment and domain information
>PRK05363 TMAO/DMSO reductase; Reviewed Back     alignment and domain information
>cd00321 SO_family_Moco Sulfite oxidase (SO) family, molybdopterin binding domain Back     alignment and domain information
>PF03404 Mo-co_dimer: Mo-co oxidoreductase dimerisation domain; InterPro: IPR005066 The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT) Back     alignment and domain information
>COG2041 Sulfite oxidase and related enzymes [General function prediction only] Back     alignment and domain information
>COG3915 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes Back     alignment and domain information
>PF10648 Gmad2: Immunoglobulin-like domain of bacterial spore germination; InterPro: IPR018911 This domain is found linked to IPR019606 from INTERPRO in some bacterial proteins Back     alignment and domain information
>PF15418 DUF4625: Domain of unknown function (DUF4625) Back     alignment and domain information
>PF13754 Big_3_4: Bacterial Ig-like domain (group 3) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
1ogp_A393 The Crystal Structure Of Plant Sulfite Oxidase Prov 0.0
2a99_A372 Crystal Structure Of Recombinant Chicken Sulfite Ox 3e-85
2a9d_A372 Crystal Structure Of Recombinant Chicken Sulfite Ox 3e-85
1sox_A466 Sulfite Oxidase From Chicken Liver Length = 466 3e-85
3hc2_A466 Crystal Structure Of Chicken Sulfite Oxidase Mutant 8e-85
2a9b_A372 Crystal Structure Of R138q Mutant Of Recombinant Su 1e-84
3hbq_A466 Structure Of Recombinant Chicken Liver Sulfite Oxid 4e-84
3hbp_A466 Structure Of Recombinant Chicken Liver Sulfite Oxid 4e-84
3r18_A466 Chicken Sulfite Oxidase Double Mutant With Altered 3e-83
3r19_A466 Chicken Sulfite Oxidase Triple Mutant With Altered 6e-83
2bih_A474 Crystal Structure Of The Molybdenum-containing Nitr 4e-51
2bii_A424 Crystal Structure Of Nitrate-Reducing Fragment Of A 1e-49
2blf_A373 Sulfite Dehydrogenase From Starkeya Novella Length 1e-28
2c9x_A373 Sulfite Dehydrogenase From Starkeya Novella Y236f M 3e-28
2ca3_A373 Sulfite Dehydrogenase From Starkeya Novella R55m Mu 8e-28
2ca4_A373 Sulfite Dehydrogenase From Starkeya Novella Mutant 1e-27
2xts_A390 Crystal Structure Of The Sulfane Dehydrogenase Soxc 2e-19
>pdb|1OGP|A Chain A, The Crystal Structure Of Plant Sulfite Oxidase Provides Insight Into Sulfite Oxidation In Plants And Animals Length = 393 Back     alignment and structure 
Iteration: 1

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/393 (78%), Positives = 351/393 (89%)
Query: 1   MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
           MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD
Sbjct: 1   MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60
Query: 61  DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
            ++SY V++ GLI+N + LF++DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVS
Sbjct: 61  HLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVS 120
Query: 121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
           AIGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQA
Sbjct: 121 AIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQA 180
Query: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
           TNPEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSVKWLD+IN++AEE QGFFMQKD
Sbjct: 181 TNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKD 240
Query: 241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
           YKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIER
Sbjct: 241 YKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIER 300
Query: 301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
           VDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AA
Sbjct: 301 VDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAA 360
Query: 361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
           NVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct: 361 NVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393
>pdb|2A99|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase At Resting State Length = 372 Back     alignment and structure
>pdb|2A9D|A Chain A, Crystal Structure Of Recombinant Chicken Sulfite Oxidase With Arg At Residue 161 Length = 372 Back     alignment and structure
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver Length = 466 Back     alignment and structure
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr 322 Phe Length = 466 Back     alignment and structure
>pdb|2A9B|A Chain A, Crystal Structure Of R138q Mutant Of Recombinant Sulfite Oxidase At Resting State Length = 372 Back     alignment and structure
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase Mutant Cys 185 Ala Length = 466 Back     alignment and structure
>pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant Sulfite Oxidase With Bound Substrate, Sulfite, At The Active Site Length = 466 Back     alignment and structure
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered Activity And Substrate Affinity Length = 466 Back     alignment and structure
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered Activity And Substrate Affinity Length = 466 Back     alignment and structure
>pdb|2BIH|A Chain A, Crystal Structure Of The Molybdenum-containing Nitrate Reducing Fragment Of Pichia Angusta Assimilatory Nitrate Reductase Length = 474 Back     alignment and structure
>pdb|2BII|A Chain A, Crystal Structure Of Nitrate-Reducing Fragment Of Assimilatory Nitrate Reductase From Pichia Angusta Length = 424 Back     alignment and structure
>pdb|2BLF|A Chain A, Sulfite Dehydrogenase From Starkeya Novella Length = 373 Back     alignment and structure
>pdb|2C9X|A Chain A, Sulfite Dehydrogenase From Starkeya Novella Y236f Mutant Length = 373 Back     alignment and structure
>pdb|2CA3|A Chain A, Sulfite Dehydrogenase From Starkeya Novella R55m Mutant Length = 373 Back     alignment and structure
>pdb|2CA4|A Chain A, Sulfite Dehydrogenase From Starkeya Novella Mutant Length = 373 Back     alignment and structure
>pdb|2XTS|A Chain A, Crystal Structure Of The Sulfane Dehydrogenase Soxcd From Paracoccus Pantotrophus Length = 390 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query393
1ogp_A393 Sulfite oxidase; oxidoreductase, molybdenum cofact 0.0
2a9d_A372 Sulfite oxidase; molybdopterin, molybdenum, oxidor 1e-158
1sox_A466 Sulfite oxidase; oxidoreductase, sulfite oxidation 1e-154
2blf_A373 SORA, sulfite\:cytochrome C oxidoreductase subunit 1e-144
2bih_A474 Nitrate reductase [NADPH]; flavoprotein, nitrate a 1e-136
2bii_A424 Nitrate reductase [NADPH]; FAD, flavoprotein, heme 1e-134
2xts_A390 Sulfite dehydrogenase; oxidoreductase-electron tra 1e-115
1xdy_A298 Bacterial sulfite oxidase; bioinformatics, sequenc 3e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1 Length = 393 Back     alignment and structure
 Score =  512 bits (1320), Expect = 0.0
 Identities = 308/393 (78%), Positives = 351/393 (89%)

Query: 1   MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVD 60
           MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD
Sbjct: 1   MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVD 60

Query: 61  DIESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVS 120
            ++SY V++ GLI+N + LF++DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVS
Sbjct: 61  HLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVS 120

Query: 121 AIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQA 180
           AIGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQA
Sbjct: 121 AIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQA 180

Query: 181 TNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 240
           TNPEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSVKWLD+IN++AEE QGFFMQKD
Sbjct: 181 TNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKD 240

Query: 241 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIER 300
           YKMFPPSVNWDNINW SRRP MDFPVQ  ICS+EDV ++KPGK  + GYAVSGGGRGIER
Sbjct: 241 YKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIER 300

Query: 301 VDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAA 360
           VDIS+DGGKNWVEASR Q+ G  YI++H SSDKWAWV FE  ID+  +T+++AKAVD+AA
Sbjct: 301 VDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAA 360

Query: 361 NVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393
           NVQPE+VE++WNLRGVLNTSWHRV +R+GHSN+
Sbjct: 361 NVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A* Length = 372 Back     alignment and structure
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* Length = 466 Back     alignment and structure
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A* Length = 373 Back     alignment and structure
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta} Length = 474 Back     alignment and structure
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta} Length = 424 Back     alignment and structure
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus} Length = 390 Back     alignment and structure
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A* Length = 298 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
1ogp_A393 Sulfite oxidase; oxidoreductase, molybdenum cofact 100.0
2a9d_A372 Sulfite oxidase; molybdopterin, molybdenum, oxidor 100.0
1sox_A466 Sulfite oxidase; oxidoreductase, sulfite oxidation 100.0
2blf_A373 SORA, sulfite\:cytochrome C oxidoreductase subunit 100.0
2bih_A474 Nitrate reductase [NADPH]; flavoprotein, nitrate a 100.0
2bii_A424 Nitrate reductase [NADPH]; FAD, flavoprotein, heme 100.0
2xts_A390 Sulfite dehydrogenase; oxidoreductase-electron tra 100.0
1xdy_A298 Bacterial sulfite oxidase; bioinformatics, sequenc 100.0
3pe9_A98 Fibronectin(III)-like module; CBHA, beta-sandwich, 99.08
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 97.93
3pdd_A190 Glycoside hydrolase, family 9; CBHA, beta-sandwich 97.34
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1 Back     alignment and structure
Probab=100.00  E-value=2.3e-107  Score=821.97  Aligned_cols=392  Identities=78%  Similarity=1.321  Sum_probs=349.8

Q ss_pred             CCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcc-cCCCCeEEEEEeccCCceee
Q 016226            1 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIV-DDIESYYVSICGLIENSKDL   79 (393)
Q Consensus         1 ~~~~~~~~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~-~~~~~w~L~V~G~V~~p~~l   79 (393)
                      |||..++|+|+++|++++.|++++++|||+|||+..|.+++|||+++||+|||+++|.+ |. ++|+|+|+|+|++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~vP~i~d~-~~w~L~V~G~V~~p~~l   79 (393)
T 1ogp_A            1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHL-QSYSVTLTGLIQNPRKL   79 (393)
T ss_dssp             -CCEECCSSSTTCCCCCTTCEEEETTTTEEECCHHHHTSCSSCCGGGSCEECSSCCCEESCS-TTCEEEEEESSSSCCEE
T ss_pred             CCCccCCCccccCCCCCCCceEcCCCCCCCCCChHHcccCCcCCcccceEecCCCCCccCCC-CceEEEEEeEcCCCeEe
Confidence            99999999999999999999999999999999999998899999999999999999999 77 99999999999999999


Q ss_pred             cHHHHhcCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEE
Q 016226           80 FMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS  159 (393)
Q Consensus        80 tl~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~  159 (393)
                      |++||++||+++++++|+|+||+|++|++++++.|++|+.++|+++.|+||+|+|||++||++..+.....+.++|.|+|
T Consensus        80 tl~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~g  159 (393)
T 1ogp_A           80 FIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVS  159 (393)
T ss_dssp             EHHHHHTSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEE
T ss_pred             eHHHHhcCCCEEEEEEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEEE
Confidence            99999999999999999999999999998899999999999999999999999999999999854211112336999999


Q ss_pred             ccCccccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeee
Q 016226          160 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK  239 (393)
Q Consensus       160 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~  239 (393)
                      +|.....++.+|.++|||+++|++++++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||++
T Consensus       160 ~D~~~~~~~~~Y~~sipl~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~~~  239 (393)
T 1ogp_A          160 VDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQK  239 (393)
T ss_dssp             SCCCGGGTTCCCEEEEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHS
T ss_pred             cCcccccCCCCeEEEeEHHHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcceec
Confidence            99654444457999999999998644799999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCcccCCCCCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCc
Q 016226          240 DYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK  319 (393)
Q Consensus       240 ~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~  319 (393)
                      +|+++++.++++...+.+..+|++|++||+|++|.++++|..|.++|+||||||||++|+|||||+|||+||+.|+|..+
T Consensus       240 ~Y~~~p~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~  319 (393)
T 1ogp_A          240 DYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQE  319 (393)
T ss_dssp             SSCCCCTTCCTTTCCGGGSCCCCSCCCEEEECSSCSEEEECSEEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESS
T ss_pred             cccccCCCCCcccccCCCCceeeeecccEEEeCCCCCCEecCCcEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCc
Confidence            99999988877766666677999999999999999999999889999999999988899999999999999999999874


Q ss_pred             CCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEeecCC
Q 016226          320 TGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM  393 (393)
Q Consensus       320 ~~~p~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~~~~~  393 (393)
                      +..++.....+..+|||++|+++|++.+.++|+|||||++||+||+....+||++||+||+||+|+|+|.++++
T Consensus       320 ~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~vRA~D~~gn~QP~~~~~~wN~~G~~~N~~~~v~v~~~~~~~  393 (393)
T 1ogp_A          320 PGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL  393 (393)
T ss_dssp             SSSCCCSSSTTSCTTSCEEEEEEEEESSCEEEEEEEEETTCCBCCSCHHHHCCTTCCCCCCCEEEEEEEC----
T ss_pred             CccccccccccCCCCEEEEEEEEEecCCCeEEEEEEEcCCCCcCCCCccCcccCCCcccCCEEEEEEECCCCCC
Confidence            31111111122358999999999998557899999999999999998556799999999999999999988875
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A* Back     alignment and structure
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* Back     alignment and structure
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A* Back     alignment and structure
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta} Back     alignment and structure
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta} Back     alignment and structure
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus} Back     alignment and structure
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A* Back     alignment and structure
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum} Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 393
d1ogpa2261 d.176.1.1 (A:2-262) Sulfite oxidase, middle cataly 1e-100
d2a9da2249 d.176.1.1 (A:95-343) Sulfite oxidase, middle catal 1e-76
d1ogpa1127 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal d 1e-43
d2a9da1123 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal d 7e-34
d1xdya_269 d.176.1.1 (A:) Bacterial sulfite oxidase YedY {Esc 2e-20
>d1ogpa2 d.176.1.1 (A:2-262) Sulfite oxidase, middle catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 261 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Oxidoreductase molybdopterin-binding domain
superfamily: Oxidoreductase molybdopterin-binding domain
family: Oxidoreductase molybdopterin-binding domain
domain: Sulfite oxidase, middle catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  297 bits (760), Expect = e-100
 Identities = 213/261 (81%), Positives = 236/261 (90%)

Query: 2   PGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDD 61
           PG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD 
Sbjct: 1   PGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDH 60

Query: 62  IESYYVSICGLIENSKDLFMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSA 121
           ++SY V++ GLI+N + LF++DIR L KYN+TATLQCAGNRRTAMS VR V+GVGWDVSA
Sbjct: 61  LQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSA 120

Query: 122 IGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQAT 181
           IGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQAT
Sbjct: 121 IGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQAT 180

Query: 182 NPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDY 241
           NPEADVLLAYEMNGE LNRDHG+PLRVVVPGVIGARSVKWLD+IN++AEE QGFFMQKDY
Sbjct: 181 NPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDY 240

Query: 242 KMFPPSVNWDNINWKSRRPLM 262
           KMFPPSVNWDNINW SRRP M
Sbjct: 241 KMFPPSVNWDNINWSSRRPQM 261
>d2a9da2 d.176.1.1 (A:95-343) Sulfite oxidase, middle catalytic domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 249 Back     information, alignment and structure
>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 127 Back     information, alignment and structure
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 123 Back     information, alignment and structure
>d1xdya_ d.176.1.1 (A:) Bacterial sulfite oxidase YedY {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query393
d1ogpa2261 Sulfite oxidase, middle catalytic domain {Mouse-ea 100.0
d2a9da2249 Sulfite oxidase, middle catalytic domain {Chicken 100.0
d1xdya_269 Bacterial sulfite oxidase YedY {Escherichia coli [ 100.0
d2a9da1123 Sulfite oxidase, C-terminal domain {Chicken (Gallu 100.0
d1ogpa1127 Sulfite oxidase, C-terminal domain {Mouse-ear cres 100.0
d1qbaa1105 Bacterial chitobiase (N-acetyl-beta-glucoseaminida 82.35
>d1ogpa2 d.176.1.1 (A:2-262) Sulfite oxidase, middle catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Oxidoreductase molybdopterin-binding domain
superfamily: Oxidoreductase molybdopterin-binding domain
family: Oxidoreductase molybdopterin-binding domain
domain: Sulfite oxidase, middle catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-75  Score=558.43  Aligned_cols=257  Identities=82%  Similarity=1.364  Sum_probs=240.0

Q ss_pred             CCCCCCCCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcccCCCCeEEEEEeccCCceeecH
Q 016226            2 PGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM   81 (393)
Q Consensus         2 ~~~~~~~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~~~~~~w~L~V~G~V~~p~~ltl   81 (393)
                      ||.+.|++|.++|.|+|.|++++++|||+|||++.|.+++|||+++||||||+++|.+|+.++|+|+|+|+|++|++|||
T Consensus         1 p~~~~p~~~~~~p~r~p~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~fvRnh~~vP~~d~~~~w~L~V~G~V~~p~~ltl   80 (261)
T d1ogpa2           1 PGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGLIQNPRKLFI   80 (261)
T ss_dssp             CCEECCSSSTTCCCCCTTCEEEETTTTEEECCHHHHTSCSSCCGGGSCEECSSCCCEESCSTTCEEEEEESSSSCCEEEH
T ss_pred             CCCCCCcccccCCCCCcceEECCCCCCcccCChHHhccCCcCCCCCEEEEccCCCCCcCccCcEEEEEecccCCCcccCH
Confidence            67889999999999999999999999999999999999999999999999999999998668999999999999999999


Q ss_pred             HHHhcCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEcc
Q 016226           82 RDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSID  161 (393)
Q Consensus        82 ~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D  161 (393)
                      +||++||+++++++|+|+||+|++|+.++++.|++|+.|+|+|++|+||+|+|||++||++..+.....++++|.|.|+|
T Consensus        81 ~dL~~~p~~~~~~~l~C~gN~r~~~~~~~~~~g~~W~~gai~~a~WtGv~L~dlL~~aGv~~~~~~~~~~a~~v~f~g~D  160 (261)
T d1ogpa2          81 KDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVD  160 (261)
T ss_dssp             HHHHTSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEESC
T ss_pred             HHHhcCCCEEEEEEEEecccchhcccccccccccCccccccccceEEeeEHHHHHHHhCCccccccccCCceEEEEEecc
Confidence            99999999999999999999999998888899999999999999999999999999999986433334468999999999


Q ss_pred             CccccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeecc
Q 016226          162 KCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDY  241 (393)
Q Consensus       162 ~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y  241 (393)
                      .+...+++.|.+||||+++|++..++||||+||||||+++|||||||||||++|++|||||++|+|++++++||||+++|
T Consensus       161 ~~~~~~~~~y~~sipl~~al~~~~dvlLA~~mNGepLp~~hG~PlRLvVPg~~G~~svKWl~~I~v~d~~~~g~w~~~~Y  240 (261)
T d1ogpa2         161 RCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDY  240 (261)
T ss_dssp             CCGGGTTCCCEEEEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHSSS
T ss_pred             cccccCCCCceeEEEHHHhhCcccceEEEEeeCCcccccccCCcEEEEccCceeeeCceEeeEEEEEecCCCCcceecCc
Confidence            76665666899999999999876689999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcccCCCCCC
Q 016226          242 KMFPPSVNWDNINWKSR  258 (393)
Q Consensus       242 ~~~~~~~~~~~~~~~~~  258 (393)
                      ++++|.+++++..|+..
T Consensus       241 ~~~~p~~~~~~~~~~~~  257 (261)
T d1ogpa2         241 KMFPPSVNWDNINWSSR  257 (261)
T ss_dssp             CCCCTTCCTTTCCGGGS
T ss_pred             cccCCCCCCcCCCcccc
Confidence            99999998888887543
>d2a9da2 d.176.1.1 (A:95-343) Sulfite oxidase, middle catalytic domain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1xdya_ d.176.1.1 (A:) Bacterial sulfite oxidase YedY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1qbaa1 b.1.18.2 (A:781-885) Bacterial chitobiase (N-acetyl-beta-glucoseaminidase), C-terminal domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure