Citrus Sinensis ID: 016259
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 392 | ||||||
| 122937709 | 400 | hemolysin III-related family protein [Li | 0.915 | 0.897 | 0.689 | 1e-152 | |
| 449521317 | 414 | PREDICTED: adiponectin receptor protein | 0.915 | 0.867 | 0.672 | 1e-151 | |
| 449448202 | 414 | PREDICTED: adiponectin receptor protein | 0.915 | 0.867 | 0.672 | 1e-151 | |
| 296084692 | 390 | unnamed protein product [Vitis vinifera] | 0.915 | 0.920 | 0.688 | 1e-151 | |
| 225458870 | 415 | PREDICTED: adiponectin receptor protein | 0.915 | 0.865 | 0.677 | 1e-151 | |
| 224127168 | 383 | predicted protein [Populus trichocarpa] | 0.897 | 0.919 | 0.684 | 1e-148 | |
| 359496410 | 497 | PREDICTED: ADIPOR-like receptor CG5315-l | 0.936 | 0.738 | 0.695 | 1e-145 | |
| 363814426 | 380 | uncharacterized protein LOC100778227 [Gl | 0.905 | 0.934 | 0.672 | 1e-145 | |
| 255568631 | 399 | conserved hypothetical protein [Ricinus | 0.905 | 0.889 | 0.669 | 1e-144 | |
| 357482541 | 379 | Adiponectin receptor protein [Medicago t | 0.928 | 0.960 | 0.675 | 1e-144 |
| >gi|122937709|gb|ABM68566.1| hemolysin III-related family protein [Lilium longiflorum] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/383 (68%), Positives = 305/383 (79%), Gaps = 24/383 (6%)
Query: 32 KEGKAKKNWKKAKWHLVEYQKLPLYLRDNEYIVGYYRSEWPLKQILLSIFSIHNETLNVW 91
KEGK ++ WKK K+ LVEY LP Y++DNEYI+GYYR+EWPLKQI LS+FSIHNETLNVW
Sbjct: 20 KEGKGRRLWKKVKYQLVEYHSLPGYMKDNEYILGYYRAEWPLKQIFLSVFSIHNETLNVW 79
Query: 92 THLIGFFLFLFLTIYTAMRVPAVVHLDSLQRFRDMLPVADWHKIQEQLLSCFPSMPNIPD 151
THLIGFF+FL LTIYTAM+VP VV L +LQ D+L D HKIQ +LL+C PSMP+I D
Sbjct: 80 THLIGFFIFLALTIYTAMKVPDVVDLRTLQHLSDVLRKTDLHKIQSELLACLPSMPHISD 139
Query: 152 PHRLMDVLKIKMSWPSMDFLTSL---------SACL-------------KDDVVNKLAPI 189
RL D + K S PS+D L SL S CL +D+ N +AP+
Sbjct: 140 LQRLRD--EWKTSLPSLDMLPSLPNWHLLELLSNCLPQRFSQPDLTKTVNEDMANVIAPL 197
Query: 190 TVQAITRWPIFTFLGGAMFCLLASSTCHLLCCHSERLSYIMLRLDYAGIAALISTSFYPP 249
++ I+RWP F FLGGAMFCLLASSTCHLL CHS RL+YIMLRLDYAGIAALI+TSFYPP
Sbjct: 198 FLKPISRWPFFAFLGGAMFCLLASSTCHLLSCHSRRLAYIMLRLDYAGIAALITTSFYPP 257
Query: 250 IYYSFMCYPFLCNLYLGFITVLGIATIVISLLPVFEKPKFRSFRASLFFGMGISGVAPVL 309
+YYSFMC+PF CNLYLG ITVLGIATI++SLLPVF+ P++R+ RA LFFGMG+SGV PVL
Sbjct: 258 VYYSFMCHPFFCNLYLGSITVLGIATILVSLLPVFQNPEYRAMRAGLFFGMGVSGVVPVL 317
Query: 310 HKLILFRDKPEAVQTTGYEILMGLFYGFGALIYAMRVPERWKPGKFDIAGHSHQLFHVLV 369
HKLI+FR++PEAV TT YEILMGL YG GAL+YA RVPERW PGKFDIAGHSHQLFHVLV
Sbjct: 318 HKLIMFRNRPEAVHTTAYEILMGLLYGLGALVYATRVPERWMPGKFDIAGHSHQLFHVLV 377
Query: 370 VAGAYTHYLDGLVYLRWRDLEGC 392
VAGA+THY GLVYL+WRDLEGC
Sbjct: 378 VAGAFTHYQTGLVYLKWRDLEGC 400
|
Source: Lilium longiflorum Species: Lilium longiflorum Genus: Lilium Family: Liliaceae Order: Liliales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449521317|ref|XP_004167676.1| PREDICTED: adiponectin receptor protein 2-like isoform 1 [Cucumis sativus] gi|449521319|ref|XP_004167677.1| PREDICTED: adiponectin receptor protein 2-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449448202|ref|XP_004141855.1| PREDICTED: adiponectin receptor protein 2-like isoform 1 [Cucumis sativus] gi|449448204|ref|XP_004141856.1| PREDICTED: adiponectin receptor protein 2-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|296084692|emb|CBI25834.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225458870|ref|XP_002285384.1| PREDICTED: adiponectin receptor protein 2 [Vitis vinifera] gi|302142182|emb|CBI19385.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224127168|ref|XP_002320004.1| predicted protein [Populus trichocarpa] gi|222860777|gb|EEE98319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359496410|ref|XP_002264538.2| PREDICTED: ADIPOR-like receptor CG5315-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|363814426|ref|NP_001242849.1| uncharacterized protein LOC100778227 [Glycine max] gi|255644752|gb|ACU22878.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255568631|ref|XP_002525289.1| conserved hypothetical protein [Ricinus communis] gi|223535447|gb|EEF37117.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357482541|ref|XP_003611557.1| Adiponectin receptor protein [Medicago truncatula] gi|355512892|gb|AES94515.1| Adiponectin receptor protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 392 | ||||||
| TAIR|locus:2120140 | 385 | HHP4 "heptahelical protein 4" | 0.880 | 0.896 | 0.675 | 2.8e-128 | |
| TAIR|locus:2121808 | 374 | HHP5 "heptahelical protein 5" | 0.852 | 0.893 | 0.661 | 2.9e-119 | |
| TAIR|locus:2149319 | 332 | HHP1 "heptahelical transmembra | 0.507 | 0.599 | 0.537 | 2.9e-74 | |
| TAIR|locus:2126709 | 358 | HHP2 "heptahelical transmembra | 0.594 | 0.650 | 0.440 | 1.6e-67 | |
| TAIR|locus:2047550 | 344 | HHP3 "heptahelical protein 3" | 0.545 | 0.622 | 0.483 | 2.8e-50 | |
| FB|FBgn0038984 | 444 | CG5315 [Drosophila melanogaste | 0.443 | 0.391 | 0.480 | 7.7e-50 | |
| UNIPROTKB|Q32KM7 | 386 | ADIPOR2 "Adiponectin receptor | 0.522 | 0.531 | 0.443 | 4.2e-49 | |
| UNIPROTKB|E2R8Q9 | 386 | ADIPOR2 "Uncharacterized prote | 0.522 | 0.531 | 0.439 | 5.3e-49 | |
| ZFIN|ZDB-GENE-041210-60 | 359 | adipor2 "adiponectin receptor | 0.484 | 0.529 | 0.461 | 6.8e-49 | |
| UNIPROTKB|Q86V24 | 386 | ADIPOR2 "Adiponectin receptor | 0.522 | 0.531 | 0.439 | 6.8e-49 |
| TAIR|locus:2120140 HHP4 "heptahelical protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
Identities = 235/348 (67%), Positives = 281/348 (80%)
Query: 47 LVEYQKLPLYLRDNEYIVGYYRSEWPLKQILLSIFSIHNETLNVWTHLIGXXXXXXXTIY 106
LVE+ LP YLRDNEYI+G+YRSEWP+KQILLSIF+IHNETLNVWTHLIG TIY
Sbjct: 39 LVEFHSLPAYLRDNEYIIGHYRSEWPIKQILLSIFTIHNETLNVWTHLIGFFLFLALTIY 98
Query: 107 TAMRVPAVVHLDSLQ-RFRDMLPVADWHKIQEQLLSCFPSMPNIPDPHRLM-DVLKIKMS 164
TA +VP+VV L SLQ R D+L D HK+ +L++ PS P+ L+ + L + S
Sbjct: 99 TATKVPSVVDLHSLQHRLPDLLRKTDLHKLHSELMARLPSSPSSWHVMDLLYNCLPERFS 158
Query: 165 WPSMDFLTSLSACLKDDVVNKLAPITVQAITRWPIFTFLGGAMFCLLASSTCHLLCCHSE 224
+ + L + +++D+ N +AP+ + ITRWP + FLGGAMFCLLASSTCHLL CHSE
Sbjct: 159 HGNYTDMCVLHS-VREDLANLIAPLIFRPITRWPFYAFLGGAMFCLLASSTCHLLSCHSE 217
Query: 225 RLSYIMLRLDYAGIAALISTSFYPPIYYSFMCYPFLCNLYLGFITVLGIATIVISLLPVF 284
R+SYIMLRLDYAGIAALI+TSFYPP+YYSFMC PF CNLYLGFIT+LGIAT+++SLLPVF
Sbjct: 218 RVSYIMLRLDYAGIAALIATSFYPPVYYSFMCDPFFCNLYLGFITILGIATVLVSLLPVF 277
Query: 285 EKPKFRSFRASLFFGMGISGVAPVLHKLILFRDKPEAVQTTGYEILMGLFYGFGALIYAM 344
+ P+FR RASLFFGMG SG+AP+LHKLI+F D+PEA+ TTGYEILMGL YG GAL+YA
Sbjct: 278 QSPEFRVVRASLFFGMGFSGLAPILHKLIIFWDQPEALHTTGYEILMGLLYGLGALVYAT 337
Query: 345 RVPERWKPGKFDIAGHSHQLFHVLVVAGAYTHYLDGLVYLRWRDLEGC 392
R+PERW PGKFDIAGHSHQLFHVLVVAGA+THY GLVYL+WRD+EGC
Sbjct: 338 RIPERWMPGKFDIAGHSHQLFHVLVVAGAFTHYRAGLVYLKWRDIEGC 385
|
|
| TAIR|locus:2121808 HHP5 "heptahelical protein 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149319 HHP1 "heptahelical transmembrane protein1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2126709 HHP2 "heptahelical transmembrane protein2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047550 HHP3 "heptahelical protein 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0038984 CG5315 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q32KM7 ADIPOR2 "Adiponectin receptor 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R8Q9 ADIPOR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-041210-60 adipor2 "adiponectin receptor 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q86V24 ADIPOR2 "Adiponectin receptor protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 392 | |||
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 6e-42 | |
| COG1272 | 226 | COG1272, COG1272, Predicted membrane protein, hemo | 1e-21 | |
| TIGR01065 | 204 | TIGR01065, hlyIII, channel protein, hemolysin III | 4e-08 | |
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 1e-04 |
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Score = 145 bits (369), Expect = 6e-42
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 16/193 (8%)
Query: 186 LAPITVQAITRWPIFTFLGGAMFCLLASSTCHLLCCHSE-RLSYIMLRLDYAGIAALIST 244
LA + P + LL S+ HL CHSE R Y++ +LD++GI LI+
Sbjct: 30 LASLGGSPWEVVPFSIYGLSLFLLLLVSTLYHLFSCHSEGRAKYVLRKLDHSGIYLLIAG 89
Query: 245 SFYPPIYYSFMCYPFLCNLYLGFITVLGIATIVISLLPVFEKPKFRSFRASLFFGMGISG 304
S+ P + Y+ L + L FI L + I++ L +FR R L+ MG G
Sbjct: 90 SYTPFLLYAL--CGPLGWILLIFIWGLALLGILLKLFW---LKRFRWLRTVLYLLMGWLG 144
Query: 305 VAPVLHKLILFRDKPEAVQTTGYEILMGLFYGFGALIYAMRVPERWKPGKFDIAGHSHQL 364
+ P+ H ++ +L G+ Y GA+ YA+R P G FDI GHSHQ+
Sbjct: 145 IIPIKHLILALGGG-----GLVLLVLGGVLYTLGAIFYALRFP-----GPFDIWGHSHQI 194
Query: 365 FHVLVVAGAYTHY 377
FH+ VV GA HY
Sbjct: 195 FHLFVVLGALCHY 207
|
Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. Length = 207 |
| >gnl|CDD|224191 COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|233258 TIGR01065, hlyIII, channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 392 | |||
| KOG0748 | 286 | consensus Predicted membrane proteins, contain hem | 100.0 | |
| PF03006 | 222 | HlyIII: Haemolysin-III related; InterPro: IPR00425 | 100.0 | |
| COG1272 | 226 | Predicted membrane protein, hemolysin III homolog | 100.0 | |
| TIGR01065 | 204 | hlyIII channel protein, hemolysin III family. This | 100.0 | |
| PRK15087 | 219 | hemolysin; Provisional | 100.0 | |
| KOG4243 | 298 | consensus Macrophage maturation-associated protein | 99.76 | |
| PF05875 | 262 | Ceramidase: Ceramidase; InterPro: IPR008901 This e | 96.71 | |
| KOG2970 | 319 | consensus Predicted membrane protein [Function unk | 95.52 | |
| PF04080 | 267 | Per1: Per1-like ; InterPro: IPR007217 A member of | 95.24 | |
| PF13965 | 570 | SID-1_RNA_chan: dsRNA-gated channel SID-1 | 90.13 | |
| PF12036 | 186 | DUF3522: Protein of unknown function (DUF3522); In | 84.31 |
| >KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-68 Score=513.42 Aligned_cols=271 Identities=51% Similarity=0.892 Sum_probs=240.7
Q ss_pred ccceeeeccCCCcccccCCcccccccCCCCHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhccccccccchhhh
Q 016259 43 AKWHLVEYQKLPLYLRDNEYIVGYYRSEWPLKQILLSIFSIHNETLNVWTHLIGFFLFLFLTIYTAMRVPAVVHLDSLQR 122 (392)
Q Consensus 43 ~~~~l~~~~elP~~~~dN~yI~tGYR~~~s~~~cl~SlF~~HNETvNIWTHlig~~~fl~l~~~~~~~~~~~~~~~~~~~ 122 (392)
++.+++++||+|+|+||||||++|||+..|.++|++|+|++||||+||||||+|+++|+.+.++.....
T Consensus 7 ~~~~l~~~~~lP~~~~dn~yi~~gyR~~~s~~~c~~S~f~~hNEt~NiwTHLlg~i~f~~~~~~~~~~~----------- 75 (286)
T KOG0748|consen 7 KRPRLLPWDELPEWLKDNEYILTGYRPGSSFRACFKSIFQWHNETLNIWTHLLGFILFLFLLILFMPRV----------- 75 (286)
T ss_pred cccccCChhhCCHHHhcCcceeCccCCCCCHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHcccc-----------
Confidence 456899999999999999999999998888999999999999999999999999999999988742210
Q ss_pred hhccCccchhhHHHHhhhhcCCCCCCCCCcchhhHHHhhhcCCcchhhhhhhhhhhhhhhhhhccccccccccchhHHHH
Q 016259 123 FRDMLPVADWHKIQEQLLSCFPSMPNIPDPHRLMDVLKIKMSWPSMDFLTSLSACLKDDVVNKLAPITVQAITRWPIFTF 202 (392)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if 202 (392)
..+ .+. +.. ..+.+|
T Consensus 76 ----------------------~~~--------------------------------~~~---------~~~--~~~~lf 90 (286)
T KOG0748|consen 76 ----------------------LLP--------------------------------VDS---------HLS--EKIFLF 90 (286)
T ss_pred ----------------------ccc--------------------------------ccc---------cch--HHHHHH
Confidence 000 000 000 013455
Q ss_pred HHHHHHHHHHHHHHhhccCCCHHHHHHHHHhhhhhHHHHHhhcchhhhhhhhcccchhhHHHHHHHHHHHHHHHHHhhcc
Q 016259 203 LGGAMFCLLASSTCHLLCCHSERLSYIMLRLDYAGIAALISTSFYPPIYYSFMCYPFLCNLYLGFITVLGIATIVISLLP 282 (392)
Q Consensus 203 ~~~~~~~l~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~GS~~p~~yy~f~c~~~~~~~yl~~~~~l~~~~~~~~~~~ 282 (392)
..+ ++++|++||+++|||++.++.|.++||+||+++|.||++|.+||+|+|.+.++..|++.+.++++++++.++.+
T Consensus 91 ~~~---~~~~S~~~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~~~~iy~~~~~~lgi~~~~~~l~~ 167 (286)
T KOG0748|consen 91 FLG---CLLLSSLYHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPFFRLIYLPIILVLGLLAIFVSLSD 167 (286)
T ss_pred HHH---HHHHHHHHHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHheeechh
Confidence 555 34449999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcCccchhhHhHHhhhhhhhhhHHHHHHhcCC-cchhhHHHHHHHHHHHHHHHHHHhhhcCCccCCCCccccCCCc
Q 016259 283 VFEKPKFRSFRASLFFGMGISGVAPVLHKLILFRDK-PEAVQTTGYEILMGLFYGFGALIYAMRVPERWKPGKFDIAGHS 361 (392)
Q Consensus 283 ~f~~~~~r~lR~~~fv~~g~~~~vPi~h~i~~~g~~-~~~~~~l~~~~~~~~~Y~~G~~fYa~r~PER~~PG~FD~~G~S 361 (392)
+++++++|.+|+.+|+.+|.++++|++|+++..|+. +.....+.++.+++++|++|++||++|+||||+|||||++|||
T Consensus 168 ~~~~~~~r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~S 247 (286)
T KOG0748|consen 168 KFRTPKRRPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHS 247 (286)
T ss_pred hhCCccchhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCCh
Confidence 998899899999999999999999999999998875 4566789999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 016259 362 HQLFHVLVVAGAYTHYLDGLVYLRWRDLEGC 392 (392)
Q Consensus 362 HqIwHi~Vvlaa~~h~~ai~~~~~~r~~~~c 392 (392)
|||||++|++|+++|+.|+..++++|++..|
T Consensus 248 HQifHv~vv~~a~~~~~a~~~~~~~~~~~~~ 278 (286)
T KOG0748|consen 248 HQIFHVLVVLAALFHLEAVLLDYEWRHSHLC 278 (286)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999843
|
|
| >PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01065 hlyIII channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >PRK15087 hemolysin; Provisional | Back alignment and domain information |
|---|
| >KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases | Back alignment and domain information |
|---|
| >KOG2970 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [] | Back alignment and domain information |
|---|
| >PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1 | Back alignment and domain information |
|---|
| >PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 392 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 2e-04
Identities = 57/393 (14%), Positives = 111/393 (28%), Gaps = 128/393 (32%)
Query: 2 IMIGFKIKQMMNSHSESSVDPWETCDLLDCKEGKAKKNWKKAKWHLVEYQKLPLYLRDNE 61
+ + H ++ P E LL K+ Q LP E
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLL-------------LKYLDCRPQDLP-----RE 321
Query: 62 YIVGYYRSEWPLKQILLSIF----SIHNETLNVWTHLIGFFLFLFLTIYTAMRVPAVVHL 117
+ P LSI T + W H ++ +
Sbjct: 322 VLTTN-----PR---RLSIIAESIRDGLATWDNWKH------------VNCDKLTTI--- 358
Query: 118 DSLQRFRDMLPVADWHKIQEQLLSCFPSMPNIPDPHRLMDVLKIKMSWPSMDFLTSLSAC 177
++ ++L A++ K+ ++ LS FP +IP +L + W +
Sbjct: 359 --IESSLNVLEPAEYRKMFDR-LSVFPPSAHIP-----TILLSL--IWFDVIKSDV---- 404
Query: 178 LKDDVVNKLAPITVQAITRWPIFTFLGGAMFCLLASSTCHL------LCCHSERLSYIML 231
VVNKL + + P ST + L E +
Sbjct: 405 --MVVVNKLH--KYSLVEKQP-------------KESTISIPSIYLELKVKLENEYALHR 447
Query: 232 RL--DYAGIAALISTSFYPPI----YYSFMCY-----------PFLCNLYL--GFI---- 268
+ Y S PP +YS + + ++L F+
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 269 ----TVLGIATIVISLLPVFEKPKFRSFRASLFFGMGISGVAPVLHKLI------LFRDK 318
T + +++ L + ++ + I P +L+ L + +
Sbjct: 508 RHDSTAWNASGSILNTLQQLK--FYKPY---------ICDNDPKYERLVNAILDFLPKIE 556
Query: 319 PEAVQTTGYEIL-MGLFYGFGALIY-AMRVPER 349
+ + ++L + L A+ A + +R
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 392 | |||
| d1lr7a1 | 26 | Domain of follistatin {Rat (Rattus norvegicus) [Ta | 87.66 |
| >d1lr7a1 g.3.11.3 (A:64-88) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: Follistatin (FS) module N-terminal domain, FS-N domain: Domain of follistatin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.66 E-value=0.085 Score=29.69 Aligned_cols=22 Identities=45% Similarity=0.629 Sum_probs=16.2
Q ss_pred ccccccccccchhhhhcccccc
Q 016259 24 ETCDLLDCKEGKAKKNWKKAKW 45 (392)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~ 45 (392)
||||+.||+.+|+-|..++.++
T Consensus 1 etcdnvdcgpgk~c~mnrrnkp 22 (26)
T d1lr7a1 1 ETCENVDCGPGKKCRMNKKNKP 22 (26)
T ss_dssp CCSTTCCCCTTEEEEECTTSCE
T ss_pred CcccccccCCCccccccccCCC
Confidence 7999999999776665554443
|