Citrus Sinensis ID: 016271

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
Protein Sequence
MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMENPYTTPPQEDKILYK
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHcccccccccccHHHHHHHcccccHccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEccccccccccHHHHHHHHcHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
mqffalngfpcptlqnpsdhFLKTINKDFQEDIEKglagvvptQEAIDILTKSYKSSDSYLQVRSQVAEICKAqdsgalekksthadfLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFsnlgtdnnsiQARGSLLMFVASFLTFmtiggfpsfVEDMKVFERErlnghygaTAFVFGNTFSALPYLALISlipgaivydlpglhkgyqHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLmilgggffrlpndlphpfwkyplyYIAFHKYAYQGMFknefeglkfdnnldgeqVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAfmsvpmkrttqimenpyttppqedkilyk
Flexible Loop (DISEMBL)
MQffalngfpcptlqnpSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSgalekksthadfLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAfmsvpmkrttqimenpyttppqedkilyk
Low Complexity Region (SEG)
MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRlgvyvllgvglATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMENPYTTPPQEDKILYK
Disordered region (IsUnstruct)
**FFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQ****L**KSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSV*************************
Disordered Region (DISOPRED)
MQFFALNGFPCPTLQNPSDHFLKTINK******************AIDILTKSYKSSDS****************************FLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKP*********************************
Disordered Region (DISEMBL)
MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMENPYTTPPQEDKILYK
Disordered Region (DISPRO)
MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDS*****KSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMK**********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMENPYTTPPQEDKILYK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	392	2.2.26 [Sep-21-2011]
Q8RXN0	703	ABC transporter G family	yes	no	0.969	0.540	0.466	2e-94
Q8RWI9	691	ABC transporter G family	no	no	0.954	0.541	0.401	9e-85
Q9C8J8	678	ABC transporter G family	no	no	0.954	0.551	0.370	6e-78
Q9C8K2	687	ABC transporter G family	no	no	0.956	0.545	0.401	7e-78
Q9ZUU9	730	ABC transporter G family	no	no	0.877	0.471	0.329	4e-54
Q3E9B8	624	ABC transporter G family	no	no	0.698	0.439	0.261	4e-26
Q9MAH4	590	ABC transporter G family	no	no	0.721	0.479	0.256	1e-23
Q9SW08	577	ABC transporter G family	no	no	0.709	0.481	0.285	2e-23
Q9FLX5	589	ABC transporter G family	no	no	0.609	0.405	0.285	3e-22
Q9SIT6	649	ABC transporter G family	no	no	0.647	0.391	0.260	2e-21

>sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1

 Score =  345 bits (886), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 187/401 (46%), Positives = 263/401 (65%), Gaps = 21/401 (5%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGV--------------VPTQEAI 47
           +FFA  GFPCP L+NPSDHFL+ IN DF + +   L G               + T EAI
Sbjct: 282 EFFAQAGFPCPALRNPSDHFLRCINSDF-DKVRATLKGSMKLRFEASDDPLEKITTAEAI 340

Query: 48  DILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDL 107
            +L   Y +SD Y   +++V EI + + +  L+   + A FL Q   LT RSF+NM RD 
Sbjct: 341 RLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDF 399

Query: 108 GYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDM 167
           GYYW RL +Y+L+ V + T++ N+GT  ++I ARGS   FV  F+TFM+IGGFPSFVEDM
Sbjct: 400 GYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDM 459

Query: 168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLL 227
           KVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L
Sbjct: 460 KVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCL 519

Query: 228 FACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYI 287
           +A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI
Sbjct: 520 YASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYI 579

Query: 288 AFHKYAYQGMFKNEFEGLKFDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVF 342
           +FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ 
Sbjct: 580 SFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIII 639

Query: 343 YRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMENPYTTP 383
           YR++F  ++KT E + P V+ +++    +     +N    P
Sbjct: 640 YRIIFFIMIKTNEDVTPWVRGYIARRRMKQKNGTQNTTVAP 680

Required for the cuticle and pollen coat development by controlling cutin and maybe wax transport to the extracellular matrix. Involved in developmental plasticity and stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RWI9|AB15G_ARATH ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2

 Score =  314 bits (804), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 160/399 (40%), Positives = 249/399 (62%), Gaps = 25/399 (6%)

Query: 1   MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQE-----------AIDI 49
           ++FFA +GFPCP  +NPSDHFL+ IN DF + +   L G    QE           A  +
Sbjct: 257 VEFFAESGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIQETPATSDPLMNLATSV 315

Query: 50  ----LTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYR 105
               L ++YK S      +S++ E+   +      +K + A +  Q   LT+RSF+NM R
Sbjct: 316 IKARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCR 375

Query: 106 DLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVE 165
           D+GYYW R+  Y+++ + + T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E
Sbjct: 376 DVGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLE 435

Query: 166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVL 225
           +MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y+L     G+ H+ +F L
Sbjct: 436 EMKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCL 495

Query: 226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
            +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ 
Sbjct: 496 NIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVS 555

Query: 286 YIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDNWQLQMGYSKWVDLAILFGM 339
           YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  +
Sbjct: 556 YISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAI 615

Query: 340 VVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMEN 378
           +V YRL+F  ++K  E+  P +KA   +  KRT + ++ 
Sbjct: 616 LVCYRLLFFVVLKLRERAGPALKA---IQAKRTMRNLDR 651

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8J8|AB13G_ARATH ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1

 Score =  291 bits (745), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 152/410 (37%), Positives = 232/410 (56%), Gaps = 36/410 (8%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGV--------------------- 40
           +FF   GFPCP+ +NPSDHFL+ +N DF +++   L                        
Sbjct: 243 KFFGEAGFPCPSRRNPSDHFLRCVNSDF-DNVTAALVESRRINDSSFSLHQLHETTNTLD 301

Query: 41  ----VPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLT 96
               +PT E    L + +K S      R+++ EI          KK +  ++  Q  +LT
Sbjct: 302 PLDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILT 361

Query: 97  SRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMT 156
            RSF+NM RDLGYYW R+ VY++L + + ++F N+G ++ ++ +  +   F+A F+TFM+
Sbjct: 362 QRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMS 421

Query: 157 IGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKG 216
           IGGF SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I   +     G
Sbjct: 422 IGGFQSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSG 481

Query: 217 YQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLP 276
             HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP
Sbjct: 482 GSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLP 541

Query: 277 HPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKW 330
             FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW
Sbjct: 542 MVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKW 601

Query: 331 VDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRT-TQIMENP 379
           +DLA++  +++ YR+ F  I+K  EK+ PV+    +   KRT + I + P
Sbjct: 602 LDLAVVMMILIGYRIAFFAILKFREKVFPVIHMLYT---KRTLSHIQKRP 648

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8K2|AB12G_ARATH ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1

 Score =  291 bits (744), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 160/399 (40%), Positives = 249/399 (62%), Gaps = 24/399 (6%)

Query: 1   MQFFALNGFPCPTLQNPSDHFLKTINKDF---------QEDIEKGLAGVVP-----TQEA 46
           ++FFA  GFPCP  +NPSDHFL+ IN DF          + I +  A   P     T E 
Sbjct: 257 VEFFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEI 316

Query: 47  IDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE-KKSTHADFLTQCIVLTSRSFVNMYR 105
              L ++Y+ S      +S++ E+   +    +E +K + A +  Q   LT RSFVNM R
Sbjct: 317 KARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCR 376

Query: 106 DLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVE 165
           D+GYYW R+ +Y+++   + T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E
Sbjct: 377 DIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIE 436

Query: 166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVL 225
           +MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y++     G  H+ +F L
Sbjct: 437 EMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCL 496

Query: 226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
            +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ 
Sbjct: 497 NIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPIS 556

Query: 286 YIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDNWQLQMGYSKWVDLAILFGM 339
           ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  +
Sbjct: 557 FMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLI 616

Query: 340 VVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIMEN 378
           +V YR++F  ++K  E+ +P +KA  +   KRT + ++ 
Sbjct: 617 LVCYRILFFIVLKLKERAEPALKAIQA---KRTMKSLKK 652

Involved in the secretion of cuticular wax from epidermal cells to the cuticle.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUU9|AB3G_ARATH ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=2

 Score =  212 bits (540), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 192/361 (53%), Gaps = 17/361 (4%)

Query: 1   MQFFALNGFPCPTLQNPSDHFLKTINKDF----------QEDIEKGLAGVVPTQEAIDIL 50
           +Q F+  GFPCP +Q+PSDHFL+ IN DF          Q+D     A  + T  AI  L
Sbjct: 344 LQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTL 403

Query: 51  TKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYY 110
             +YKSS     V + + ++ + +  G   K    A   T+  VLT RS + M R+  YY
Sbjct: 404 EATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYY 461

Query: 111 WFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVF 170
           W RL +Y++L + + T++S LG   +S+  R + +    SF + + I G PS ++++K++
Sbjct: 462 WLRLILYMILTLSIGTLYSGLGHSLSSVATRVAAVFVFVSFASLLGIAGIPSLLKEIKIY 521

Query: 171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFAC 230
             E  N H GA  F+ G    ++P+L L+S+    + Y + GL   +    YFVL  F C
Sbjct: 522 RSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMC 581

Query: 231 MLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFH 290
           +L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH
Sbjct: 582 LLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFH 641

Query: 291 KYAYQGMFKNEFEGLKFD----NNLDGEQVLRDNWQLQMGY-SKWVDLAILFGMVVFYRL 345
            Y+ +G+ +NE+ G  F      ++ G Q ++ N+Q+     +KW ++ +L  M   YRL
Sbjct: 642 TYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRL 701

Query: 346 V 346
           +
Sbjct: 702 L 702

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E9B8|AB23G_ARATH ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 149/287 (51%), Gaps = 13/287 (4%)

Query: 74  QDSGALEKKSTHADF-LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLG 132
           ++ G + KK       +T+   L SR    +YR    +  R    V+ G+GL +V++ L 
Sbjct: 333 ENDGIISKKEAFRVLDVTEISYLCSRFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLK 392

Query: 133 TDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSA 192
            D   +  R  L  F  SFL   T+   P ++ + +V  +E   G Y  ++++  NT + 
Sbjct: 393 RDEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAF 452

Query: 193 LPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGI 252
           +P+L ++SL+    VY + GL+   Q F++FVL ++  +L+  SL++ ++++ P++++G 
Sbjct: 453 VPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGN 512

Query: 253 ITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDN 309
                + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +
Sbjct: 513 SLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSS 570

Query: 310 N-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIV 351
                 + GE VL++    +   ++W+++ I+    VFYR++  GI+
Sbjct: 571 GNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MAH4|AB10G_ARATH ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1

 Score =  111 bits (277), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 146/300 (48%), Gaps = 17/300 (5%)

Query: 49  ILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHAD-FLTQCIVLTSRSFVNMYRDL 107
           I T+S +    Y    S+  + C     G L +  +H++  L +  +L  RS  N++R  
Sbjct: 292 IRTQSCREISCYGH--SKTWKSCYISAGGELHQSDSHSNSVLEEVQILGQRSCKNIFRTK 349

Query: 108 GYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVED 166
             +  R     + G+ L +++ N+G      +  R     F+ +FL   T  G P F++D
Sbjct: 350 QLFTTRALQASIAGLILGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQD 409

Query: 167 MKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLL 226
            ++  RE     Y   ++V  +T   +P+L +IS++    VY L GL +    F YF L+
Sbjct: 410 RRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLV 469

Query: 227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYY 286
           ++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y
Sbjct: 470 IWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHY 527

Query: 287 IAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLV 346
           ++  KY ++ +  NE+ G  F    D    L+++        KW +L I+   +V YR++
Sbjct: 528 LSLFKYPFECLMINEYRGDVFLKQQD----LKES-------QKWSNLGIMASFIVGYRVL 576

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SW08|AB4G_ARATH ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 20/298 (6%)

Query: 74  QDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGT 133
           Q    +  KS+    +T+  +L+SR +  +YR        +   +++G+ L T++ N+GT
Sbjct: 286 QKQSIVRYKSSR---ITEISLLSSRFWKIIYRTRQLLLTNILESLVVGLVLGTIYLNIGT 342

Query: 134 DNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSAL 193
               I+ R  L  F  +FL   T    P F+++  +  RE  +G Y  ++ +  NT   L
Sbjct: 343 GKEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFL 402

Query: 194 PYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGII 253
           PYL LI++I    +Y L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  
Sbjct: 403 PYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTS 462

Query: 254 TGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE-----------F 302
           +   +     L  G+F     LP  +W + +Y+ + +KYA   +  NE           F
Sbjct: 463 SVTILLAAFFLFSGYFISKESLPK-YWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWF 520

Query: 303 EGLKFDNNL-DGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 358
           E    ++ L  G  VL  N   +    +W ++ +L G  V YR L FL ++K V   K
Sbjct: 521 EEASVNSCLVTGGDVLDKNGLHER--QRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLX5|AB8G_ARATH ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1

 Score =  106 bits (265), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 13/252 (5%)

Query: 118 VLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNG 177
           +++G+ L T++ N+G     I+ R  +  F  +FL   T    P F+ +  +  RE  +G
Sbjct: 339 LVVGLVLGTIYINIGIGKAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSG 398

Query: 178 HYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESL 237
            Y  ++ +  NT   LPYL +IS+I    VY L GL   +Q F YFVL+++  +L+  S 
Sbjct: 399 IYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSF 458

Query: 238 MMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGM 297
           ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   +
Sbjct: 459 VLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPK-YWLF-MYFFSMYKYALDAL 516

Query: 298 FKNEFEGLKFDNNLDGEQVLRDNWQLQMG----------YSKWVDLAILFGMVVFYR-LV 346
             NE+  L     +  E+       +  G            +W ++ +L G  V YR L 
Sbjct: 517 LINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEKQRWFNVYVLLGFFVLYRVLC 576

Query: 347 FLGIVKTVEKMK 358
           FL +++ V   K
Sbjct: 577 FLALLRRVSGSK 588

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIT6|AB5G_ARATH ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1

 Score =  103 bits (258), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 136/265 (51%), Gaps = 11/265 (4%)

Query: 89  LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFV 148
           L + ++LT R   N++R    +  R    +  G+ L  +F NL  D    + R  L  F+
Sbjct: 370 LEETMILTHRFSKNIFRTKELFACRTVQMLGSGIVLGLIFHNLKDDLKGARERVGLFAFI 429

Query: 149 ASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVY 208
            +FL   TI   P F+++ ++  +E  +G Y  +++   N    LP+L +++++    VY
Sbjct: 430 LTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVY 489

Query: 209 DLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGF 268
            L GL+  +  F +F LL++  +    S+++  ++LVPN++ G    +G+ G   L  G+
Sbjct: 490 WLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGY 549

Query: 269 FRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLD---GEQVLRDNWQLQM 325
           F   +++P  +W + ++YI+  KY ++G   NEF   K +  L+   G+ ++ +   L+ 
Sbjct: 550 FISNHEIPG-YWIF-MHYISLFKYPFEGFLINEFS--KSNKCLEYGFGKCLVTEEDLLKE 605

Query: 326 GY----SKWVDLAILFGMVVFYRLV 346
                 S+W ++ I+   V+ YR +
Sbjct: 606 ERYGEESRWRNVVIMLCFVLLYRFI 630

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
255569746	701	ATP-binding cassette transporter, putati	0.971	0.543	0.706	1e-164
224060415	622	white-brown-complex ABC transporter fami	0.928	0.585	0.711	1e-160
147782239	691	hypothetical protein VITISV_012972 [Viti	0.969	0.549	0.689	1e-158
225462868	676	PREDICTED: ABC transporter G family memb	0.969	0.562	0.683	1e-158
359475745	798	PREDICTED: ABC transporter G family memb	0.977	0.479	0.661	1e-155
359497424	698	PREDICTED: ABC transporter G family memb	0.961	0.540	0.657	1e-154
296088208	891	unnamed protein product [Vitis vinifera]	0.961	0.423	0.657	1e-154
359497157	565	PREDICTED: ABC transporter G family memb	0.959	0.665	0.657	1e-154
147856245	857	hypothetical protein VITISV_020569 [Viti	0.961	0.439	0.654	1e-153
225462866	653	PREDICTED: ABC transporter G family memb	0.969	0.581	0.660	1e-153

>gi|255569746|ref|XP_002525837.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223534842|gb|EEF36531.1| ATP-binding cassette transporter, putative [Ricinus communis]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/389 (70%), Positives = 318/389 (81%), Gaps = 8/389 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FFALNGFPCPTLQNPSDHFLKTINKDF++D+E+GL      +EAI  L KSYKSS +Y 
Sbjct: 307 EFFALNGFPCPTLQNPSDHFLKTINKDFEKDLERGLGYGTTAEEAIATLVKSYKSSHNYQ 366

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QVR  VAEICK QDSGAL+K+ T A F+TQ ++LT RS VNM+RDLGYYW RL +YV L 
Sbjct: 367 QVRRHVAEICK-QDSGALQKERTRASFITQSLILTRRSSVNMFRDLGYYWLRLAIYVALA 425

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           VGLATVF NLG+   SI+ RGSLLMF+ASFLTFM IGGFPSFVEDMK+F+RERLNGHYG 
Sbjct: 426 VGLATVFGNLGSSYASIKDRGSLLMFIASFLTFMAIGGFPSFVEDMKIFQRERLNGHYGT 485

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GNTFSA+P+L LISL+PGAI Y LPGLH G +HF YF+  LFACM+LVESLMM V
Sbjct: 486 AAFVLGNTFSAIPFLLLISLVPGAITYFLPGLHGGAEHFLYFICSLFACMMLVESLMMTV 545

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQ LMIL GGFFRLP DLP PFWKYP++YIAFH+YAYQGMFKNE
Sbjct: 546 ASIVPNFLMGIITGAGIQSLMILAGGFFRLPRDLPAPFWKYPMHYIAFHRYAYQGMFKNE 605

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           FEGL F NN       + GE++LR+ WQ+ + YSKWVDLAIL GMVV YRL+FLGI+   
Sbjct: 606 FEGLTFPNNQIGGPSEVSGEEILRNIWQVDLSYSKWVDLAILLGMVVVYRLLFLGIISIK 665

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENPYTTP 383
           EK+KP++ A +S   K+TTQIMENP TTP
Sbjct: 666 EKVKPMITALISASPKQTTQIMENPVTTP 694

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060415|ref|XP_002300188.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222847446|gb|EEE84993.1| white-brown-complex ABC transporter family [Populus trichocarpa]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/388 (71%), Positives = 316/388 (81%), Gaps = 24/388 (6%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQE---------------DIEKGLAGVVPTQEA 46
           +FFALNGFPCPTLQNPSDHFLKTINKDF+                D E+GL   +  + A
Sbjct: 236 EFFALNGFPCPTLQNPSDHFLKTINKDFETVCFLIQCLALRYLWLDPEQGLEDAITAEVA 295

Query: 47  IDILTKSYKSSDSYLQVRSQVAEICK-AQDSGALEKKSTHADFLTQCIVLTSRSFVNMYR 105
           I+ LTK+YKSSD Y +V+  V EI +  QD G LE++S H+ FLTQC+VLT RSFVNMYR
Sbjct: 296 INTLTKAYKSSDHYQKVKRLVTEIFRWIQDCGTLEERS-HSSFLTQCLVLTRRSFVNMYR 354

Query: 106 DLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVE 165
           DLGYYW R+ +YV L +GLAT+F NLG+DN+SIQ RGSLLMF+ASFLTFMTIGGFPSFVE
Sbjct: 355 DLGYYWLRVAIYVALALGLATLFYNLGSDNDSIQDRGSLLMFIASFLTFMTIGGFPSFVE 414

Query: 166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVL 225
           DMKVFERERLNGHYGATAFV GNTFSA PYL LIS+IPGAI Y LPGLHKGY+HF YFVL
Sbjct: 415 DMKVFERERLNGHYGATAFVLGNTFSAFPYLLLISVIPGAITYYLPGLHKGYEHFIYFVL 474

Query: 226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
           +LFACM+LVESLMM VAS+VPN+L GIITGAGIQ  MILGGGFFRLPNDLP PFWKYP+Y
Sbjct: 475 VLFACMMLVESLMMTVASMVPNFLMGIITGAGIQAFMILGGGFFRLPNDLPQPFWKYPMY 534

Query: 286 YIAFHKYAYQGMFKNEFEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFG 338
           YIAFHKYAYQGMFKNEFEGL F +N       + GEQ+LRD WQ++MG SKWVDLAIL G
Sbjct: 535 YIAFHKYAYQGMFKNEFEGLTFPSNQTGGPRTIPGEQILRDRWQVEMGVSKWVDLAILLG 594

Query: 339 MVVFYRLVFLGIVKTVEKMKPVVKAFMS 366
           MVV YR++FL I+KT EK+KP++ A +S
Sbjct: 595 MVVLYRILFLVIIKTSEKIKPIIAAIVS 622

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782239|emb|CAN60999.1| hypothetical protein VITISV_012972 [Vitis vinifera]

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 267/387 (68%), Positives = 321/387 (82%), Gaps = 7/387 (1%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FF+ NGFPCPT QNPSDHFLKTINKDF+EDIE+G  G    +EAIDILTK+YKSSD++ 
Sbjct: 297 EFFSSNGFPCPTHQNPSDHFLKTINKDFEEDIEQGFGGKKSKEEAIDILTKAYKSSDNFQ 356

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV++QV+EI K QD GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL +YV L 
Sbjct: 357 QVQTQVSEIYK-QDGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAIYVALT 414

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           V L T+F N+G  N+SI+ RGS+LM+VASFLTFM+IGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 415 VALGTIFHNVGYSNSSIKDRGSMLMYVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGS 474

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
           ++FV GNT S++PYL +ISLIPGAI Y L GL K Y HF Y+ L+LF CM+LVESLMMIV
Sbjct: 475 SSFVVGNTLSSVPYLLVISLIPGAIAYFLTGLQKEYAHFIYYALVLFTCMMLVESLMMIV 534

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL+ILGGGFFRLPNDLP+ FW+YPLYYI+F++YAYQG++KNE
Sbjct: 535 ASVVPNFLMGIITGAGIQGLLILGGGFFRLPNDLPNVFWRYPLYYISFNRYAYQGLYKNE 594

Query: 302 FEGLKFDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEK 356
           F GL F +N     + GE+VLR+ WQ++M YSKWVDL+IL GMVV YR +F   +KT EK
Sbjct: 595 FLGLTFPSNIAGRVITGEEVLRETWQMEMAYSKWVDLSILIGMVVLYRFLFFIFIKTTEK 654

Query: 357 MKPVVKAFMSVPMKRTTQIMENPYTTP 383
           + P VKAFMS P K+T Q+M NP+ TP
Sbjct: 655 VIPTVKAFMSRPPKQTKQVMANPFATP 681

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462868|ref|XP_002270647.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/389 (68%), Positives = 321/389 (82%), Gaps = 9/389 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FF+ NGFPCPT QNPSDHFLKTINKDF+EDIE+G  G    +EAIDILTK+YKSSD++ 
Sbjct: 280 EFFSSNGFPCPTHQNPSDHFLKTINKDFEEDIEQGFGGKKSKEEAIDILTKAYKSSDNFQ 339

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV++QV+EI K QD GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL +YV L 
Sbjct: 340 QVQTQVSEIYK-QDGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAIYVALT 397

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           V L T+F N+G  N+SI+ RGS+LM+VASFLTFM+IGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 398 VALGTIFHNVGYSNSSIKDRGSMLMYVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGS 457

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
           ++F+ GNT S++PYL +ISLIPGAI Y L GL K Y HF Y+ L+LF CM+LVESLMMIV
Sbjct: 458 SSFLVGNTLSSVPYLLVISLIPGAIAYFLTGLQKEYAHFIYYALVLFTCMMLVESLMMIV 517

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL+ILGGGFFRLPNDLP+ FW+YPLYYI+F++YAYQG++KNE
Sbjct: 518 ASVVPNFLMGIITGAGIQGLLILGGGFFRLPNDLPNVFWRYPLYYISFNRYAYQGLYKNE 577

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           F GL F +N       + GE+VLR+ WQ++M YSKWVDL+IL GMVV YR +F   +KT 
Sbjct: 578 FLGLTFPSNIAGGPRVITGEEVLRETWQMEMAYSKWVDLSILIGMVVLYRFLFFIFIKTT 637

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENPYTTP 383
           EK+ P VKAFMS P K+T Q+M NP+ TP
Sbjct: 638 EKVIPTVKAFMSRPPKQTKQVMANPFATP 666

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475745|ref|XP_002270397.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 258/390 (66%), Positives = 313/390 (80%), Gaps = 7/390 (1%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           + F+ NGFPCPTLQNPSDHFLKTINKDF+EDIE+GL G  P +E IDIL K+YKSS S  
Sbjct: 289 ELFSRNGFPCPTLQNPSDHFLKTINKDFEEDIEQGLGGKKPKEEVIDILIKAYKSSGSCQ 348

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV++QV EICK +   AL+K   HA F+ QC++LT RS+VNM RDLGYYW RLGVY+++ 
Sbjct: 349 QVQAQVTEICKQEGDQALQKSRDHAGFVNQCLILTKRSYVNMSRDLGYYWMRLGVYIMVS 408

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
             L T+F +LG  N+SIQ RGS+LMFVASFLTFM+IGGFPSFVEDMKVF RERLNGHYG 
Sbjct: 409 FALGTIFYDLGFSNSSIQDRGSMLMFVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGT 468

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GNT S++P+L LISLIPGAI Y L GL KG ++F Y+ L+LFACM+LVES+MMIV
Sbjct: 469 GAFVVGNTLSSVPFLLLISLIPGAIAYYLAGLQKGCEYFIYYALVLFACMMLVESIMMIV 528

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           ASLVPN+L GIITGAGIQGL+IL GGFFRLP++LP+  W+YPLYY++F++YAYQGM+KNE
Sbjct: 529 ASLVPNFLVGIITGAGIQGLLILSGGFFRLPDNLPNILWRYPLYYVSFNRYAYQGMYKNE 588

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           F GL F  +       + GE++LR  WQ++MGYSKWVDLAIL GM+  YRL+FL I+KT 
Sbjct: 589 FTGLTFPGDQSGGPATISGEEILRKRWQVEMGYSKWVDLAILVGMIALYRLLFLIIIKTT 648

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENPYTTPP 384
           EK+ P++KAFMS P K T Q+M N   TPP
Sbjct: 649 EKVMPLIKAFMSRPPKHTNQVMSNSTPTPP 678

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497424|ref|XP_002267117.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/385 (65%), Positives = 318/385 (82%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIE+GL G   T+EAI+IL ++YKSS++  
Sbjct: 309 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 368

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV+ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 369 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 427

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA+FLTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 428 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 487

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI Y L  L KG++HF YF +LLF CM+LVESLMM+V
Sbjct: 488 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 547

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 548 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 607

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+FLGI+KTV
Sbjct: 608 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFLGIIKTV 667

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENP 379
           EK+KP+++   +VP +++ QI+E+P
Sbjct: 668 EKVKPMIRGLFAVPPEKSKQILEDP 692

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088208|emb|CBI35723.3| unnamed protein product [Vitis vinifera]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/385 (65%), Positives = 318/385 (82%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIE+GL G   T+EAI+IL ++YKSS++  
Sbjct: 502 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 561

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV+ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 562 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 620

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA+FLTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 621 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 680

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI Y L  L KG++HF YF +LLF CM+LVESLMM+V
Sbjct: 681 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 740

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 741 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 800

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+FLGI+KTV
Sbjct: 801 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFLGIIKTV 860

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENP 379
           EK+KP+++   +VP +++ QI+E+P
Sbjct: 861 EKVKPMIRGLFAVPPEKSKQILEDP 885

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497157|ref|XP_003635439.1| PREDICTED: ABC transporter G family member 11-like, partial [Vitis vinifera]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/385 (65%), Positives = 316/385 (82%), Gaps = 9/385 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIE+GL G   T+EAI+IL ++YKSS++  
Sbjct: 177 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 236

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV+ +V+EIC  Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 237 QVQGRVSEIC--QQKGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 294

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA+FLTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 295 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 354

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI Y L  L KG++HF YF +LLF CM+LVESLMM+V
Sbjct: 355 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 414

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 415 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 474

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+F+GI+KTV
Sbjct: 475 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFMGIIKTV 534

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENP 379
           EK+KP+++    VP +++ QI+ENP
Sbjct: 535 EKVKPMIRGLFVVPPEKSKQIVENP 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856245|emb|CAN81791.1| hypothetical protein VITISV_020569 [Vitis vinifera]

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 252/385 (65%), Positives = 315/385 (81%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIE+GL G   T+EAI+IL ++YKSS++  
Sbjct: 468 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 527

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV+ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 528 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 586

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA+FLTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 587 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 646

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI Y L  L KG++HF YF +LLF CM+LVESLMM+V
Sbjct: 647 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 706

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 707 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 766

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+F GI+KTV
Sbjct: 767 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFXGIIKTV 826

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENP 379
           EK+KP+++    VP +++ QI EBP
Sbjct: 827 EKVKPMIRGLFXVPPEKSKQIXEBP 851

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462866|ref|XP_002270573.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/389 (66%), Positives = 317/389 (81%), Gaps = 9/389 (2%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           +FF+ NGFPCPT QNPSDHFLKTINKDF++DIE+G  G    +EAIDILTK+YKSS ++ 
Sbjct: 257 EFFSSNGFPCPTHQNPSDHFLKTINKDFEQDIEQGFGGKKSKEEAIDILTKAYKSSGNFQ 316

Query: 62  QVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           QV+SQVA+I K ++ GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL VY+ L 
Sbjct: 317 QVQSQVAKIHK-KEGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAVYIALT 374

Query: 122 VGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + L T+F N+G  N+SI+ RG++LM+VASFLTFMTIGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 375 IALGTIFYNVGHSNSSIKDRGAMLMYVASFLTFMTIGGFPSFVEDMKVFGRERLNGHYGS 434

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIV 241
           +AFV GNT S++PYL +ISLIPGAI Y L GL KG +H  Y+ L+LF CM+LVE LMMIV
Sbjct: 435 SAFVVGNTLSSIPYLLVISLIPGAIAYYLTGLQKGCEHSIYYALVLFTCMILVEGLMMIV 494

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL++L GGFFRLP+D P PFW+YPLYY++F+KYAYQG++KNE
Sbjct: 495 ASIVPNFLMGIITGAGIQGLLMLSGGFFRLPDDFPKPFWRYPLYYLSFNKYAYQGLYKNE 554

Query: 302 FEGLKFDNN-------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV 354
           F+GLKF N+       + GE++LR  WQ++M YSKW+DLAIL GM V YRL+FL  +KT 
Sbjct: 555 FQGLKFPNDEAGGPPIISGEEILRKRWQVEMVYSKWIDLAILLGMAVLYRLLFLITIKTT 614

Query: 355 EKMKPVVKAFMSVPMKRTTQIMENPYTTP 383
           EK+ P+VKA +S P KR+ Q+M N   TP
Sbjct: 615 EKVIPLVKALVSRPSKRSKQVMANLSATP 643

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
TAIR|locus:2030898	703	ABCG11 "ATP-binding cassette G	0.926	0.516	0.471	1.3e-93
TAIR|locus:2092960	691	ABCG15 "ATP-binding cassette G	0.951	0.539	0.399	2.7e-75
TAIR|locus:2033899	687	ABCG12 "ATP-binding cassette G	0.954	0.544	0.399	1.2e-74
TAIR|locus:2033939	678	ABCG13 "ATP-binding cassette G	0.857	0.495	0.381	6.8e-71
TAIR|locus:2046203	730	ABCG3 "ATP-binding cassette G3	0.877	0.471	0.321	1e-48
CGD|CAL0002254	579	orf19.3120 [Candida albicans (	0.839	0.568	0.262	6.7e-32
UNIPROTKB|Q5A0X6	579	CaO19.10632 "Putative uncharac	0.839	0.568	0.262	6.7e-32
TAIR|locus:2150290	624	ABCG23 "ATP-binding cassette G	0.772	0.485	0.247	6e-26
TAIR|locus:2009640	590	ABCG10 "ATP-binding cassette G	0.721	0.479	0.25	6.3e-25
TAIR|locus:2117507	577	ABCG4 "ATP-binding cassette G4	0.678	0.461	0.282	9.7e-25

TAIR|locus:2030898 ABCG11 "ATP-binding cassette G11" [Arabidopsis thaliana (taxid:3702)]

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 181/384 (47%), Positives = 251/384 (65%)

Query:     2 QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGV--------------VPTQEAI 47
             +FFA  GFPCP L+NPSDHFL+ IN DF + +   L G               + T EAI
Sbjct:   282 EFFAQAGFPCPALRNPSDHFLRCINSDFDK-VRATLKGSMKLRFEASDDPLEKITTAEAI 340

Query:    48 DILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDL 107
              +L   Y +SD Y   +++V EI + + +  L+   + A FL Q   LT RSF+NM RD 
Sbjct:   341 RLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDF 399

Query:   108 GYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDM 167
             GYYW R            T++ N+GT  ++I ARGS   FV  F+TFM+IGGFPSFVEDM
Sbjct:   400 GYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDM 459

Query:   168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLL 227
             KVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y + GLH G+ H+ +FVL L
Sbjct:   460 KVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCL 519

Query:   228 FACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYI 287
             +A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI
Sbjct:   520 YASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYI 579

Query:   288 AFHKYAYQGMFKNEFEGLKFDNN-----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVF 342
             +FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ 
Sbjct:   580 SFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIII 639

Query:   343 YRLVFLGIVKTVEKMKPVVKAFMS 366
             YR++F  ++KT E + P V+ +++
Sbjct:   640 YRIIFFIMIKTNEDVTPWVRGYIA 663

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0015245 "fatty acid transporter activity" evidence=TAS

GO:0015908 "fatty acid transport" evidence=TAS

GO:0080051 "cutin transport" evidence=IMP

TAIR|locus:2092960 ABCG15 "ATP-binding cassette G15" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 159/398 (39%), Positives = 242/398 (60%)

Query:     1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQE-----------AIDI 49
             ++FFA +GFPCP  +NPSDHFL+ IN DF + +   L G    QE           A  +
Sbjct:   257 VEFFAESGFPCPKKRNPSDHFLRCINSDF-DTVTATLKGSQRIQETPATSDPLMNLATSV 315

Query:    50 ----LTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYR 105
                 L ++YK S      +S++ E+   +      +K + A +  Q   LT+RSF+NM R
Sbjct:   316 IKARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCR 375

Query:   106 DLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVE 165
             D+GYYW R            T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E
Sbjct:   376 DVGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLE 435

Query:   166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVL 225
             +MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y+L     G+ H+ +F L
Sbjct:   436 EMKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCL 495

Query:   226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
              +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ 
Sbjct:   496 NIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVS 555

Query:   286 YIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKWVDLAILFGM 339
             YI++  +A QG +KN+F GL+F+        + GE+V+   + +++ YSKW DLA +  +
Sbjct:   556 YISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAI 615

Query:   340 VVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 377
             +V YRL+F  ++K  E+  P +KA  +   KRT + ++
Sbjct:   616 LVCYRLLFFVVLKLRERAGPALKAIQA---KRTMRNLD 650

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2033899 ABCG12 "ATP-binding cassette G12" [Arabidopsis thaliana (taxid:3702)]

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 159/398 (39%), Positives = 242/398 (60%)

Query:     1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQ---------EDIEKGLAGVVP-----TQEA 46
             ++FFA  GFPCP  +NPSDHFL+ IN DF          + I +  A   P     T E 
Sbjct:   257 VEFFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEI 316

Query:    47 IDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE-KKSTHADFLTQCIVLTSRSFVNMYR 105
                L ++Y+ S      +S++ E+   +    +E +K + A +  Q   LT RSFVNM R
Sbjct:   317 KARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCR 376

Query:   106 DLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVE 165
             D+GYYW R            T+F ++G    SI AR S   F+  F+TFM+IGGFPSF+E
Sbjct:   377 DIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIE 436

Query:   166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVL 225
             +MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y++     G  H+ +F L
Sbjct:   437 EMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCL 496

Query:   226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
              +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ 
Sbjct:   497 NIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPIS 556

Query:   286 YIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDNWQLQMGYSKWVDLAILFGM 339
             ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  +
Sbjct:   557 FMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLI 616

Query:   340 VVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIME 377
             +V YR++F  ++K  E+ +P +KA  +   KRT + ++
Sbjct:   617 LVCYRILFFIVLKLKERAEPALKAIQA---KRTMKSLK 651

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

TAIR|locus:2033939 ABCG13 "ATP-binding cassette G13" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
 Identities = 132/346 (38%), Positives = 198/346 (57%)

Query:    41 VPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSF 100
             +PT E    L + +K S      R+++ EI          KK +  ++  Q  +LT RSF
Sbjct:   306 IPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILTQRSF 365

Query:   101 VNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGF 160
             +NM RDLGYYW R            ++F N+G ++ ++ +  +   F+A F+TFM+IGGF
Sbjct:   366 INMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMSIGGF 425

Query:   161 PSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHF 220
              SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I   +     G  HF
Sbjct:   426 QSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHF 485

Query:   221 TYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFW 280
              Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW
Sbjct:   486 FYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFW 545

Query:   281 KYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLD------GEQVLRDNWQLQMGYSKWVDLA 334
             +YP+ YI +  +A QG +KNE  G+++D+ L       GE +L+    +    SKW+DLA
Sbjct:   546 RYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLA 605

Query:   335 ILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRT-TQIMENP 379
             ++  +++ YR+ F  I+K  EK+ PV+    +   KRT + I + P
Sbjct:   606 VVMMILIGYRIAFFAILKFREKVFPVIHMLYT---KRTLSHIQKRP 648

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0009651 "response to salt stress" evidence=IDA

GO:0080051 "cutin transport" evidence=IMP

GO:0080172 "petal epidermis patterning" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2046203 ABCG3 "ATP-binding cassette G3" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 1.0e-48, P = 1.0e-48
 Identities = 116/361 (32%), Positives = 185/361 (51%)

Query:     1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDI--------EKG-LAGV-VPTQEAIDIL 50
             +Q F+  GFPCP +Q+PSDHFL+ IN DF   I        + G  + V + T  AI  L
Sbjct:   344 LQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTL 403

Query:    51 TKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYY 110
               +YKSS     V + + ++ + +  G   K    A   T+  VLT RS + M R+  YY
Sbjct:   404 EATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYY 461

Query:   111 WFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVF 170
             W R            T++S LG   +S+  R + +    SF + + I G PS ++++K++
Sbjct:   462 WLRLILYMILTLSIGTLYSGLGHSLSSVATRVAAVFVFVSFASLLGIAGIPSLLKEIKIY 521

Query:   171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFAC 230
               E  N H GA  F+ G    ++P+L L+S+    + Y + GL   +    YFVL  F C
Sbjct:   522 RSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMC 581

Query:   231 MLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFH 290
             +L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH
Sbjct:   582 LLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFH 641

Query:   291 KYAYQGMFKNEFEGLKFD----NNLDGEQVLRDNWQLQMGYS-KWVDLAILFGMVVFYRL 345
              Y+ +G+ +NE+ G  F      ++ G Q ++ N+Q+    + KW ++ +L  M   YRL
Sbjct:   642 TYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRL 701

Query:   346 V 346
             +
Sbjct:   702 L 702

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

CGD|CAL0002254 orf19.3120 [Candida albicans (taxid:5476)]

 Score = 354 (129.7 bits), Expect = 6.7e-32, P = 6.7e-32
 Identities = 96/366 (26%), Positives = 174/366 (47%)

Query:     1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSY 60
             +++F   G   P   NP+++ L  IN DFQ D              +D L   + S D +
Sbjct:   234 VKYFNSIGHTMPPYINPAEYVLDLINTDFQGD-----------SSVLDDLVSKWNSGDVH 282

Query:    61 LQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXX 120
              +V ++  ++ +A          T  + +   ++L +RS     RD+  Y+ R       
Sbjct:   283 -KVGTESVQLTEA----------TTINEMQNILILIARSLTKARRDILTYYVRLVMYLGL 331

Query:   121 XXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYG 180
                  TV+  L     +IQ   + + F  +F++FM++   PS++ED++ +++ER+NG YG
Sbjct:   332 AILMGTVWLRLQNGQKNIQPFINAIFFSGAFMSFMSVAYIPSYLEDIQSYKKERMNGLYG 391

Query:   181 ATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMI 240
               AF   N    LP+L LI+ +   I + +   H+    F Y+++ LF  ++  ES+   
Sbjct:   392 PLAFSLANFLVGLPFLFLIAAVFSVITFFMVNFHQTASGFWYYLMWLFLDLVAAESMTTF 451

Query:   241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKN 300
             +AS+ PN++  +   A   GL +  GGF  +P+++ + FW Y  Y+I + +Y +QGM  N
Sbjct:   452 IASVFPNFVVSLAITAFANGLWMAVGGFL-VPSNILNVFWYYTFYWIDYQRYVFQGMIFN 510

Query:   301 EFEGLKF----------DNNLDGEQVLRDNWQLQ-MGYS---KWVDLAILFGMVVFYRLV 346
             EF   +F          D+ L  +  +     L+ +GY    K + + +L  +V  YR  
Sbjct:   511 EFTNREFRCGDGCHCMYDSPLASQCKISGKAVLESLGYGNYDKGLWIGVLIALVFVYRFA 570

Query:   347 FLGIVK 352
                ++K
Sbjct:   571 TYIVLK 576

GO:0005524 "ATP binding" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

UNIPROTKB|Q5A0X6 CaO19.10632 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 354 (129.7 bits), Expect = 6.7e-32, P = 6.7e-32
 Identities = 96/366 (26%), Positives = 174/366 (47%)

Query:     1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSY 60
             +++F   G   P   NP+++ L  IN DFQ D              +D L   + S D +
Sbjct:   234 VKYFNSIGHTMPPYINPAEYVLDLINTDFQGD-----------SSVLDDLVSKWNSGDVH 282

Query:    61 LQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXX 120
              +V ++  ++ +A          T  + +   ++L +RS     RD+  Y+ R       
Sbjct:   283 -KVGTESVQLTEA----------TTINEMQNILILIARSLTKARRDILTYYVRLVMYLGL 331

Query:   121 XXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYG 180
                  TV+  L     +IQ   + + F  +F++FM++   PS++ED++ +++ER+NG YG
Sbjct:   332 AILMGTVWLRLQNGQKNIQPFINAIFFSGAFMSFMSVAYIPSYLEDIQSYKKERMNGLYG 391

Query:   181 ATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMI 240
               AF   N    LP+L LI+ +   I + +   H+    F Y+++ LF  ++  ES+   
Sbjct:   392 PLAFSLANFLVGLPFLFLIAAVFSVITFFMVNFHQTASGFWYYLMWLFLDLVAAESMTTF 451

Query:   241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKN 300
             +AS+ PN++  +   A   GL +  GGF  +P+++ + FW Y  Y+I + +Y +QGM  N
Sbjct:   452 IASVFPNFVVSLAITAFANGLWMAVGGFL-VPSNILNVFWYYTFYWIDYQRYVFQGMIFN 510

Query:   301 EFEGLKF----------DNNLDGEQVLRDNWQLQ-MGYS---KWVDLAILFGMVVFYRLV 346
             EF   +F          D+ L  +  +     L+ +GY    K + + +L  +V  YR  
Sbjct:   511 EFTNREFRCGDGCHCMYDSPLASQCKISGKAVLESLGYGNYDKGLWIGVLIALVFVYRFA 570

Query:   347 FLGIVK 352
                ++K
Sbjct:   571 TYIVLK 576

GO:0005524 "ATP binding" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2150290 ABCG23 "ATP-binding cassette G23" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 6.0e-26, P = 6.0e-26
 Identities = 80/323 (24%), Positives = 164/323 (50%)

Query:    42 PTQEAIDILT--KSYK-SSDSYLQVRSQVAEICKAQDSGALEKKSTHADF-LTQCIVLTS 97
             P + A++I+   +++K +S + ++  S   E    ++ G + KK       +T+   L S
Sbjct:   300 PIEFAMEIVESLRTFKPNSVAVVESSSMWPE--NNENDGIISKKEAFRVLDVTEISYLCS 357

Query:    98 RSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFVASFLTFMTI 157
             R    +YR    +  R            +V++ L  D   +  R  L  F  SFL   T+
Sbjct:   358 RFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAERLGLFAFSLSFLLSSTV 417

Query:   158 GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGY 217
                P ++ + +V  +E   G Y  ++++  NT + +P+L ++SL+    VY + GL+   
Sbjct:   418 EALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSI 477

Query:   218 QHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPND-LP 276
             Q F++FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F +P + +P
Sbjct:   478 QAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYF-IPKEKIP 536

Query:   277 HPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDNWQLQMGYS 328
              P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL++   L    +
Sbjct:   537 KP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERG-LDKD-T 592

Query:   329 KWVDLAILFGMVVFYRLVFLGIV 351
             +W+++ I+    VFYR++  GI+
Sbjct:   593 RWINVGIMLAFFVFYRILCWGIL 615

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2009640 ABCG10 "ATP-binding cassette G10" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 6.3e-25, P = 6.3e-25
 Identities = 75/300 (25%), Positives = 142/300 (47%)

Query:    49 ILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHAD-FLTQCIVLTSRSFVNMYRDL 107
             I T+S +    Y    S+  + C     G L +  +H++  L +  +L  RS  N++R  
Sbjct:   292 IRTQSCREISCY--GHSKTWKSCYISAGGELHQSDSHSNSVLEEVQILGQRSCKNIFRTK 349

Query:   108 GYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVED 166
               +  R            +++ N+G      +  R     F+ +FL   T  G P F++D
Sbjct:   350 QLFTTRALQASIAGLILGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQD 409

Query:   167 MKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLL 226
              ++  RE     Y   ++V  +T   +P+L +IS++    VY L GL +    F YF L+
Sbjct:   410 RRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLV 469

Query:   227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYY 286
             ++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y
Sbjct:   470 IWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHY 527

Query:   287 IAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLV 346
             ++  KY ++ +  NE+ G  F    D    L+++        KW +L I+   +V YR++
Sbjct:   528 LSLFKYPFECLMINEYRGDVFLKQQD----LKES-------QKWSNLGIMASFIVGYRVL 576

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2117507 ABCG4 "ATP-binding cassette G4" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 80/283 (28%), Positives = 134/283 (47%)

Query:    89 LTQCIVLTSRSFVNMYRDLGYYWFRXXXXXXXXXXXATVFSNLGTDNNSIQARGSLLMFV 148
             +T+  +L+SR +  +YR                    T++ N+GT    I+ R  L  F 
Sbjct:   298 ITEISLLSSRFWKIIYRTRQLLLTNILESLVVGLVLGTIYLNIGTGKEGIRKRFGLFAFT 357

Query:   149 ASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVY 208
              +FL   T    P F+++  +  RE  +G Y  ++ +  NT   LPYL LI++I    +Y
Sbjct:   358 LTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLY 417

Query:   209 DLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGF 268
              L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+
Sbjct:   418 FLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGY 477

Query:   269 FRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK------FD----NN--LDGEQV 316
             F     LP  +W + +Y+ + +KYA   +  NE+  L       F+    N+  + G  V
Sbjct:   478 FISKESLPK-YWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDV 535

Query:   317 LRDNWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIVKTVEKMK 358
             L  N   +    +W ++ +L G  V YR L FL ++K V   K
Sbjct:   536 LDKNGLHER--QRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	392
TIGR00955	617	TIGR00955, 3a01204, The Eye Pigment Precursor Tran	4e-32
pfam01061	210	pfam01061, ABC2_membrane, ABC-2 type transporter	7e-28
TIGR00956	1394	TIGR00956, 3a01205, Pleiotropic Drug Resistance (P	7e-21
TIGR00956	1394	TIGR00956, 3a01205, Pleiotropic Drug Resistance (P	3e-14
PLN03140	1470	PLN03140, PLN03140, ABC transporter G family membe	7e-07

>gnl|CDD|233207 TIGR00955, 3a01204, The Eye Pigment Precursor Transporter (EPP) Family protein

 Score =  127 bits (321), Expect = 4e-32
 Identities = 74/362 (20%), Positives = 145/362 (40%), Gaps = 26/362 (7%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
            FF+  G PCP   NP+D +++ +                  ++  D    S    D  +
Sbjct: 256 PFFSDLGHPCPENYNPADFYVQVL----AVIPGSENESRERIEKICDSFAVSDIGRDMLV 311

Query: 62  QVRSQVAEICK-AQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLL 120
                  +     +DS  +E    +A + TQ   L  RS++++ RD      RL   ++ 
Sbjct: 312 NTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMT 371

Query: 121 GVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTI-GGFPSFVEDMKVFERERLNGHY 179
            + +  ++   G     +Q     L    + +TF  +      F  ++ VF RE  +G Y
Sbjct: 372 AILIGLIYLGQGLTQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLY 431

Query: 180 GATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMM 239
             +A+    T + LP   ++  +  +I Y + GL  G  HF  F+ L+     +  S   
Sbjct: 432 RVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGY 491

Query: 240 IVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFK 299
           +++    +    +  G       +L GGFF   + +P  ++K+ L Y+++ +Y  +G+  
Sbjct: 492 LISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIP-VYFKW-LSYLSWFRYGNEGLLI 549

Query: 300 NEFEGLK----FDNNL------DGEQVLRDNWQLQMGYSK---WVDLAILFGMVVFYRLV 346
           N++  +        N        GE +L       + +     ++DL  L  ++ F+RL+
Sbjct: 550 NQWSDVDNIECTSANTTGPCPSSGEVILE-----TLSFRNADLYLDLIGLVILIFFFRLL 604

Query: 347 FL 348
             
Sbjct: 605 AY 606

[Transport and binding proteins, Other]. Length = 617

>gnl|CDD|216273 pfam01061, ABC2_membrane, ABC-2 type transporter

 Score =  108 bits (272), Expect = 7e-28
 Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 7/215 (3%)

Query: 90  TQCIVLTSRSFVNMYRDLGY-YWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFV 148
           TQ   L  R F+  +RD      +RL   +L+ +   TVF NL T +     R  LL F 
Sbjct: 1   TQLKALLKREFLRRWRDPSLGLLWRLIQPLLMALVFGTVFGNLDT-SLGGLNRPGLLFFS 59

Query: 149 ASFLTFMTIGGF-PSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIV 207
             F  F ++ G  P F+ +  V ERE  +  Y  +A+V       LP   L ++I   IV
Sbjct: 60  ILFNAFSSLTGISPVFIRERGVLERELASPLYSPSAYVLAKILVELPISLLQAIIFLLIV 119

Query: 208 YDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGG 267
           Y + GL      F  F+L+L    L    L + +A+L P++      G  +   ++L  G
Sbjct: 120 YFMVGLP--VSRFFLFLLVLLLTALAASGLGLFIAALAPSFEDASQIGPLLLLPLLLLSG 177

Query: 268 FFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF 302
           FF   + +P   W   +YY+    YA + +  NEF
Sbjct: 178 FFIPVDSMPG--WLQWIYYLNPLTYAIEALRANEF 210

Length = 210

>gnl|CDD|233208 TIGR00956, 3a01205, Pleiotropic Drug Resistance (PDR) Family protein

 Score = 94.8 bits (236), Expect = 7e-21
 Identities = 85/394 (21%), Positives = 162/394 (41%), Gaps = 53/394 (13%)

Query: 2   QFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 61
           Q+F   GF CP  Q  +D FL ++    +  I+ G    VP           +++S  Y 
Sbjct: 300 QYFEKMGFKCPDRQTTAD-FLTSLTSPAERQIKPGYEKKVP--RTPQEFETYWRNSPEYA 356

Query: 62  QVRSQVAEI---CKAQDSG------ALEKKSTHA--------DFLTQCIVLTSRSFVNMY 104
           Q+  ++ E    C   D+        + K+S            F  Q     +R+F+ M 
Sbjct: 357 QLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMK 416

Query: 105 RDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFV 164
            +  +  F +   +++ + L++VF NL  + +   +RG  L F   F  F ++    S  
Sbjct: 417 GNPSFTLFMVFGNIIMALILSSVFYNLPKNTSDFYSRGGALFFAILFNAFSSLLEIASMY 476

Query: 165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFV 224
           E   + E+ R    Y  +A    +  S +P+  + S++   I+Y +    +    F +++
Sbjct: 477 EARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYL 536

Query: 225 LLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPL 284
           L+LF C L +  L   + ++    L+  +T A I  L +     F +P      + K+ +
Sbjct: 537 LILFICTLAMSHLFRSIGAVTKT-LSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKW-I 594

Query: 285 YYIAFHKYAYQGMFKNEFEGLKFDNN------------------------------LDGE 314
           YY+    YA++ +  NEF G +F+ +                              +DG+
Sbjct: 595 YYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGD 654

Query: 315 QVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFL 348
             L+ ++Q    + KW +  I+ G  VF+  V++
Sbjct: 655 DYLKLSFQYYNSH-KWRNFGIIIGFTVFFFFVYI 687

[Transport and binding proteins, Other]. Length = 1394

>gnl|CDD|233208 TIGR00956, 3a01205, Pleiotropic Drug Resistance (PDR) Family protein

 Score = 74.4 bits (183), Expect = 3e-14
 Identities = 65/312 (20%), Positives = 121/312 (38%), Gaps = 31/312 (9%)

Query: 1    MQFFALNGFP-CPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDS 59
            + +F  +G P CP   NP++  L+ I             G  P   A     + +++S  
Sbjct: 996  INYFEKHGAPKCPEDANPAEWMLEVI-------------GAAPGAHANQDYHEVWRNSSE 1042

Query: 60   YLQVRSQV----AEICKAQDSGALEKKSTHA-DFLTQCIVLTSRSFVNMYRDLGYYWFRL 114
            Y  V++++    AE+ KA+D    +  S +A     Q  ++  R+F   +R   Y + + 
Sbjct: 1043 YQAVKNELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKF 1102

Query: 115  GVYVLLGVGLATVFSNLGTDNNSIQ-ARGSLLMFVASFLTFMTIGGFPSFVEDMKVFE-R 172
             + +   + +   F  +GT    +Q    ++ M    F   +     P FV    ++E R
Sbjct: 1103 FLTIFAALFIGFTFFKVGTSLQGLQNQMFAVFMATVLFNPLIQ-QYLPPFVAQRDLYEVR 1161

Query: 173  ERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGL-------HKGYQHFTYFVL 225
            ER +  +   AF+       +PY  +   I   I Y   G         + ++    F L
Sbjct: 1162 ERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWL 1221

Query: 226  LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
            L     L   +L  +V S  PN     +  + +  + +   G    P+ +P  FW + +Y
Sbjct: 1222 LSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPG-FWIF-MY 1279

Query: 286  YIAFHKYAYQGM 297
              +   Y  Q +
Sbjct: 1280 RCSPFTYLVQAL 1291

[Transport and binding proteins, Other]. Length = 1394

>gnl|CDD|215599 PLN03140, PLN03140, ABC transporter G family member; Provisional

 Score = 51.0 bits (122), Expect = 7e-07
 Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 24/263 (9%)

Query: 106  DLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGF----P 161
            +L  ++F L   +++G    T+F  +GT  ++      ++  + + + F+ I       P
Sbjct: 1213 NLVRFFFTLAAALMVG----TIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQP 1268

Query: 162  SFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFT 221
                +  VF RER  G Y A  +        +PY+ + +     IVY +         F 
Sbjct: 1269 MVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFF 1328

Query: 222  YFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHP--- 278
            +F  + F   L      M+  SL PN     I  A   GL  L  GFF     +P P   
Sbjct: 1329 WFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFF-----IPRPKIP 1383

Query: 279  ---FWKYPLYYIAFHKY----AYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWV 331
                W Y +  +A+  Y    +  G  ++  +      +   +  ++D++     +   V
Sbjct: 1384 KWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPV 1443

Query: 332  DLAILFGMVVFYRLVFLGIVKTV 354
              A+L G  VF+  +F   ++T+
Sbjct: 1444 -AAVLVGFTVFFAFIFAFCIRTL 1465

Length = 1470

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	392
TIGR00955	617	3a01204 The Eye Pigment Precursor Transporter (EPP	100.0
TIGR00956	1394	3a01205 Pleiotropic Drug Resistance (PDR) Family p	100.0
PLN03140	1470	ABC transporter G family member; Provisional	100.0
PLN03211	659	ABC transporter G-25; Provisional	100.0
TIGR00956	1394	3a01205 Pleiotropic Drug Resistance (PDR) Family p	100.0
PLN03140	1470	ABC transporter G family member; Provisional	100.0
KOG0061	613	consensus Transporter, ABC superfamily (Breast can	100.0
KOG0065	1391	consensus Pleiotropic drug resistance proteins (PD	100.0
KOG0065	1391	consensus Pleiotropic drug resistance proteins (PD	100.0
PF01061	210	ABC2_membrane: ABC-2 type transporter; InterPro: I	99.88
TIGR01291	253	nodJ ABC-2 type transporter, NodJ family. Nearly a	99.76
TIGR01247	236	drrB daunorubicin resistance ABC transporter membr	99.73
TIGR03861	253	phenyl_ABC_PedC alcohol ABC transporter, permease	99.7
TIGR00025	232	Mtu_efflux ABC transporter efflux protein, DrrB fa	99.7
PRK15066	257	inner membrane transport permease; Provisional	99.64
TIGR03062	208	pip_yhgE_Cterm YhgE/Pip C-terminal domain. This fa	99.57
TIGR01248	152	drrC daunorubicin resistance protein C. The model	99.26
COG0842	286	ABC-type multidrug transport system, permease comp	99.24
TIGR03518	240	ABC_perm_GldF gliding motility-associated ABC tran	98.92
COG1682	263	TagG ABC-type polysaccharide/polyol phosphate expo	98.92
PF12679	277	ABC2_membrane_2: ABC-2 family transporter protein	98.65
PRK15176	264	Vi polysaccharide export inner membrane protein Ve	98.61
PF12698	344	ABC2_membrane_3: ABC-2 family transporter protein;	98.41
PF03379	215	CcmB: CcmB protein; InterPro: IPR003544 Within mit	98.19
PF06422	103	PDR_CDR: CDR ABC transporter; InterPro: IPR010929	97.99
COG1277	278	NosY ABC-type transport system involved in multi-c	97.85
TIGR01190	211	ccmB heme exporter protein CcmB. This model descri	97.73
PF12051	382	DUF3533: Protein of unknown function (DUF3533); In	97.52
TIGR03733	248	lanti_perm_MutG lantibiotic protection ABC transpo	97.48
COG4587	268	ABC-type uncharacterized transport system, permeas	97.41
COG1511	780	Predicted membrane protein [Function unknown]	97.01
COG2386	221	CcmB ABC-type transport system involved in cytochr	96.97
PF08370	65	PDR_assoc: Plant PDR ABC transporter associated; I	96.83
PF06182	229	ABC2_membrane_6: ABC-2 family transporter protein;	95.91
PF12730	232	ABC2_membrane_4: ABC-2 family transporter protein	95.8
TIGR01257	2272	rim_protein retinal-specific rim ABC transporter.	95.75
COG3559	536	TnrB3 Putative exporter of polyketide antibiotics	94.86
TIGR03732	241	lanti_perm_MutE lantibiotic protection ABC transpo	94.84
TIGR01257	2272	rim_protein retinal-specific rim ABC transporter.	92.76
COG4200	239	Uncharacterized protein conserved in bacteria [Fun	90.54
COG1668	407	NatB ABC-type Na+ efflux pump, permease component	87.77
PF09847	449	DUF2074: Predicted permease (DUF2074); InterPro: I	87.02

>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein

Probab=100.00  E-value=3.4e-52  Score=427.91  Aligned_cols=345  Identities=21%  Similarity=0.367  Sum_probs=299.2

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccC----
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDS----   76 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~----   76 (392)
                      ++||+++|++||++.|||||++|+++.+.+.+.        +..+..+++.+.|++|+.+++.............+    
T Consensus       255 ~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  326 (617)
T TIGR00955       255 VPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN--------ESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKD  326 (617)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHHHhhcCccccc--------chHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccc
Confidence            379999999999999999999999986543221        12344567778888887766554443322211000    


Q ss_pred             -CccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHH
Q 016271           77 -GALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFM  155 (392)
Q Consensus        77 -~~~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~  155 (392)
                       ......++.+++++|+.+|++|.++..+|||.++..++++.+++++++|++|++.+.++.+++++.|++|++++..++.
T Consensus       327 ~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~~~~~~~g~lf~~~~~~~f~  406 (617)
T TIGR00955       327 SENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQKGVQNINGALFLFLTNMTFQ  406 (617)
T ss_pred             cccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence             1112245678999999999999999999999999999999999999999999999999999999999999998888777


Q ss_pred             hh-cccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHH
Q 016271          156 TI-GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLV  234 (392)
Q Consensus       156 ~~-~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~  234 (392)
                      ++ .+++.++.||.+|.||+.+|+|+.++|++|++++++|..++.+++|++++||++|++.+++.|+.+++++++..+++
T Consensus       407 ~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~  486 (617)
T TIGR00955       407 NVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVA  486 (617)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHH
Confidence            64 67889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcC-C-----
Q 016271          235 ESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF-D-----  308 (392)
Q Consensus       235 ~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~-~-----  308 (392)
                      .++|+++++++||...|..++++++.++++++|++++.++||. ||+ |++|+||++|++++++.|||++.++ +     
T Consensus       487 ~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~-~~~-W~~~isp~~ya~~al~~nef~~~~~~~c~~~~  564 (617)
T TIGR00955       487 TSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPV-YFK-WLSYLSWFRYGNEGLLINQWSDVDNIECTSAN  564 (617)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccH-HHH-HHHHcCHHHHHHHHHHHHHhCCCccccccCcC
Confidence            9999999999999999999999999999999999999999998 554 6999999999999999999998764 3     


Q ss_pred             ----CCCCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016271          309 ----NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKM  357 (392)
Q Consensus       309 ----~~~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~  357 (392)
                          |..+|+++|+. +|++.++ .|.++++|++++++|+++++++||++.++
T Consensus       565 ~~~~c~~~g~~~l~~-~g~~~~~-~~~~~~il~~~~~~~~~l~~~~L~~~~~~  615 (617)
T TIGR00955       565 TTGPCPSSGEVILET-LSFRNAD-LYLDLIGLVILIFFFRLLAYFALRIRIRR  615 (617)
T ss_pred             cCCCCCcChHHHHHh-cCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence                34578999998 7887664 89999999999999999999999987654

>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein

Probab=100.00  E-value=4e-52  Score=457.31  Aligned_cols=350  Identities=21%  Similarity=0.390  Sum_probs=304.2

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhc------
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQ------   74 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~------   74 (392)
                      ++||+++|++||++.|||||++|+++.+.+ ...++..+  ......+++++.|++|+.+++...+++...++.      
T Consensus       299 ~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~--~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  375 (1394)
T TIGR00956       299 KQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK--KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTK  375 (1394)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc--cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhH
Confidence            379999999999999999999999875432 11111111  112234678999999988776666554332110      


Q ss_pred             -----------cCCccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHH
Q 016271           75 -----------DSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGS  143 (392)
Q Consensus        75 -----------~~~~~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g  143 (392)
                                 +.......++..|+++|+++|++|+++..+|||..+..++++.+++|+++|++|+++++++++++++.|
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~~~~~r~g  455 (1394)
T TIGR00956       376 EAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTSDFYSRGG  455 (1394)
T ss_pred             HHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Confidence                       001122346788999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHH
Q 016271          144 LLMFVASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYF  223 (392)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~  223 (392)
                      ++|+++++.+++++..++.+..||++|.||+.+++|++++|++|++++++|..++.+++|++++|||+|++.+++.|+.|
T Consensus       456 ~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f  535 (1394)
T TIGR00956       456 ALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFY  535 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHH
Confidence            99999999888888778888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcC
Q 016271          224 VLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFE  303 (392)
Q Consensus       224 ~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~  303 (392)
                      +++++++.+++.+++.++++++||...|+.+++++++++++++|+++|.++||.  |..|++|+||++|++|+++.|||+
T Consensus       536 ~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~--~~~W~~yisp~~yafeal~~nef~  613 (1394)
T TIGR00956       536 LLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLG--WSKWIYYVNPLAYAFESLMVNEFH  613 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccH--HHHHHHHcCHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999998  445699999999999999999999


Q ss_pred             CCcCCCC------------------------------CCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          304 GLKFDNN------------------------------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKT  353 (392)
Q Consensus       304 ~~~~~~~------------------------------~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~  353 (392)
                      +.+++|.                              .+|+++|+..++++.++ .|.+++++++++++|++++++++++
T Consensus       614 ~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~-~w~n~gil~~~~v~f~~~~~l~l~~  692 (1394)
T TIGR00956       614 GRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSH-KWRNFGIIIGFTVFFFFVYILLTEF  692 (1394)
T ss_pred             CCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccch-hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9887662                              37889999767887765 9999999999999999999999998


Q ss_pred             hhh
Q 016271          354 VEK  356 (392)
Q Consensus       354 ~~~  356 (392)
                      .+.
T Consensus       693 ~~~  695 (1394)
T TIGR00956       693 NKG  695 (1394)
T ss_pred             ccc
Confidence            763

>PLN03140 ABC transporter G family member; Provisional

Probab=100.00  E-value=6.1e-52  Score=454.49  Aligned_cols=342  Identities=20%  Similarity=0.300  Sum_probs=300.5

Q ss_pred             CchhhhC-CCC-CCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccCCc
Q 016271            1 MQFFALN-GFP-CPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGA   78 (392)
Q Consensus         1 v~yF~~~-G~~-cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~   78 (392)
                      ++||+++ |++ ||++.|||||+||+++.+.+..             ...++++.|++|+++++..+.+++...+.++..
T Consensus      1113 ~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~-------------~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 1179 (1470)
T PLN03140       1113 IEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVK-------------LGIDFAEHYKSSSLYQRNKALVKELSTPPPGAS 1179 (1470)
T ss_pred             HHHHHhcCCCCCCCCCCCchhhhhhhhccccccc-------------ccchHHHHHhccHHHHHHHHHHHHhccCCCCcc
Confidence            4899998 675 9999999999999987542211             113689999999988877666655443221111


Q ss_pred             --cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCh---hhHHHHHHHHHHHHHHHH
Q 016271           79 --LEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDN---NSIQARGSLLMFVASFLT  153 (392)
Q Consensus        79 --~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~---~~~~~~~g~l~~~~~~~~  153 (392)
                        ....++.+|+++|++.|++|+++.+||||.++..|+++.+++|+++|++|++++++.   .+++++.|++|+.+++.+
T Consensus      1180 ~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 1259 (1470)
T PLN03140       1180 DLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVG 1259 (1470)
T ss_pred             ccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHH
Confidence              123568899999999999999999999999999999999999999999999998654   577788999998888877


Q ss_pred             HHhh-cccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHH
Q 016271          154 FMTI-GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACML  232 (392)
Q Consensus       154 ~~~~-~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~  232 (392)
                      +..+ ..+|.+..||.+|+||+.+|+|++++|++|++++|+|+.++.+++|.+++||++|++++++.|+.|+++++++.+
T Consensus      1260 ~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~ 1339 (1470)
T PLN03140       1260 INNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFL 1339 (1470)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Confidence            7554 567899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCC--
Q 016271          233 LVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN--  310 (392)
Q Consensus       233 ~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~--  310 (392)
                      ++.++|+++++++||.+.|+.++++++.++++|||+++|.++||. ||+ |++|+||++|++++++.++|+|.++.|.  
T Consensus      1340 ~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~-~~~-W~~~isp~~y~~~~l~~~~f~~~~~~~~~~ 1417 (1470)
T PLN03140       1340 YFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPK-WWV-WYYWICPVAWTVYGLIVSQYGDVEDTIKVP 1417 (1470)
T ss_pred             HHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCch-HHH-HHHHcCHHHHHHhhhHHHHhCCCCCcccCC
Confidence            999999999999999999999999999999999999999999998 676 5999999999999999999999887654  


Q ss_pred             -----CCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016271          311 -----LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMK  358 (392)
Q Consensus       311 -----~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~k  358 (392)
                           .++.+++.+++|++.++ .|.+++++++++++|++++++++|+.+.||
T Consensus      1418 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~il~~~~~~f~~~~~~~~~~~~~q~ 1469 (1470)
T PLN03140       1418 GGAPDPTIKWYIQDHYGYDPDF-MGPVAAVLVGFTVFFAFIFAFCIRTLNFQT 1469 (1470)
T ss_pred             CCCCCCcHHHHHHHhcCcCccc-ccchhhhHHHHHHHHHHHHHHHHHHhhccc
Confidence                 34678888889998875 999999999999999999999999999876

>PLN03211 ABC transporter G-25; Provisional

Probab=100.00  E-value=5.6e-50  Score=411.60  Aligned_cols=341  Identities=18%  Similarity=0.255  Sum_probs=269.0

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHH--Hh-hc---
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEI--CK-AQ---   74 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~-~~---   74 (392)
                      ++||+++|++||++.|||||++|+++.+.+.....    ..+.....+.+.+.|+++.. ++..+..+..  .. ..   
T Consensus       295 ~~~f~~~G~~~P~~~NpADf~ldv~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  369 (659)
T PLN03211        295 MAYFESVGFSPSFPMNPADFLLDLANGVCQTDGVS----EREKPNVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFV  369 (659)
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHcCccccCCCcc----ccccchHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhh
Confidence            47999999999999999999999998653211000    00111122345556653221 1111111110  00 00   


Q ss_pred             ---c-CC-ccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHH
Q 016271           75 ---D-SG-ALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVA  149 (392)
Q Consensus        75 ---~-~~-~~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~  149 (392)
                         . .. ......+.++|++|+.+|++|+++. +||+.+...|+++.+++|+++|++|++.+  ..+++++.|++|+++
T Consensus       370 ~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~--~~~~~~r~g~lff~~  446 (659)
T PLN03211        370 GSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD--FRDVQDRLGLLFFIS  446 (659)
T ss_pred             hcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHH
Confidence               0 00 0111235578999999999999998 89999989999999999999999999985  678999999999988


Q ss_pred             HHHHHHh-hcccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHH
Q 016271          150 SFLTFMT-IGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLF  228 (392)
Q Consensus       150 ~~~~~~~-~~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~  228 (392)
                      ++.++.+ +.+++.|+.||++|.||+.+|+|++++|++|++++++|..++.+++|++++|||+|++.+++.|+.|+++++
T Consensus       447 ~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~  526 (659)
T PLN03211        447 IFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLL  526 (659)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHH
Confidence            7766654 578899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCc--
Q 016271          229 ACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK--  306 (392)
Q Consensus       229 l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~--  306 (392)
                      ++.+++.++|++++++++|...|+.+++++..++++|||++++  +||. ||. |++|+||++|++++++.|||.+.+  
T Consensus       527 l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~-~~~-W~~ylS~~~y~~eal~~nef~~~~~~  602 (659)
T PLN03211        527 GYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPS-CMA-WIKYISTTFYSYRLLINVQYGEGKRI  602 (659)
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchH-HHH-HHHHhCHHHHHHHHHHHHhcCCcccc
Confidence            9999999999999999999999999999999999999999987  7998 555 599999999999999999998643  


Q ss_pred             ---CCCCC------CHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          307 ---FDNNL------DGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       307 ---~~~~~------~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                         +.|..      .+..++.+ ...+.. +.|.++++|++++++|++++|++|++.+
T Consensus       603 ~~~~~C~~~~~~~~~~c~~~~~-~~~~~~-~~~~~~~~l~~~~~~~~~l~~~~L~~~~  658 (659)
T PLN03211        603 SSLLGCSLPHGSDRASCKFVEE-DVAGQI-SPATSVSVLIFMFVGYRLLAYLALRRIK  658 (659)
T ss_pred             ccccCCCCcccCCCCCCccchh-hhhccc-chHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence               24531      11123332 222222 4899999999999999999999998654

>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein

Probab=100.00  E-value=6.2e-50  Score=440.00  Aligned_cols=338  Identities=17%  Similarity=0.277  Sum_probs=292.6

Q ss_pred             CchhhhCCC-CCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccC---
Q 016271            1 MQFFALNGF-PCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDS---   76 (392)
Q Consensus         1 v~yF~~~G~-~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---   76 (392)
                      ++||+++|+ +||++.|||||+||+++.+.+..             ...++.+.|+.|.+.++..++++........   
T Consensus       996 ~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~-------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 1062 (1394)
T TIGR00956       996 INYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH-------------ANQDYHEVWRNSSEYQAVKNELDRLEAELSKAED 1062 (1394)
T ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc-------------hhccHHHHHhcCHHHHHHHHHHHHhhcccccCcc
Confidence            489999996 99999999999999998643221             1236889999998877766655544332110   


Q ss_pred             --CccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHH
Q 016271           77 --GALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTF  154 (392)
Q Consensus        77 --~~~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~  154 (392)
                        .....+++++|+++|+++|++|+++++||||.++..|+++.+++|+++|++|+++++++.+++++.|++|+.+++..+
T Consensus      1063 ~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~~~i~~~~g~~f~~~~~~~~ 1142 (1394)
T TIGR00956      1063 DNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSLQGLQNQMFAVFMATVLFNP 1142 (1394)
T ss_pred             ccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              011224688999999999999999999999999999999999999999999999999999999999999988776666


Q ss_pred             HhhcccchhHHHHHHH-HHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhH-------HHHHHHH
Q 016271          155 MTIGGFPSFVEDMKVF-ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQH-------FTYFVLL  226 (392)
Q Consensus       155 ~~~~~~~~~~~er~~~-~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~-------f~~~~l~  226 (392)
                      .....++.++.||.++ .||+.+|+|+..+|++|++++|+|+.++.+++|.+++||++|++.++..       |++++++
T Consensus      1143 ~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~ 1222 (1394)
T TIGR00956      1143 LIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLL 1222 (1394)
T ss_pred             HHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHH
Confidence            5556788999999886 8999999999999999999999999999999999999999999987765       9999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCc
Q 016271          227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK  306 (392)
Q Consensus       227 ~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~  306 (392)
                      ++++.+++.++|+++++++||...|+.+++++..++++|||+++|.++||. +|+| ++|+||++|++++++.++|++.+
T Consensus      1223 ~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~-~~~w-~~~~sp~~y~~~~l~~~~~~~~~ 1300 (1394)
T TIGR00956      1223 STMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPG-FWIF-MYRCSPFTYLVQALLSTGLADVP 1300 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcH-HHhH-HHhcCHHHHHHHHHHHHHcCCCe
Confidence            999999999999999999999999999999999999999999999999998 6774 99999999999999999999877


Q ss_pred             CCCC--------------------------------------------CCHHHHHhhhhccccCchhHHHHHHHHHHHHH
Q 016271          307 FDNN--------------------------------------------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVF  342 (392)
Q Consensus       307 ~~~~--------------------------------------------~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~  342 (392)
                      +.|.                                            .+|+++|+. .+++.++ .|.|++++++++++
T Consensus      1301 ~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~-~~~~~~~-~w~~~~i~~~~~~~ 1378 (1394)
T TIGR00956      1301 VTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEP-ISSKYSG-RWRNFGIFIAFIFF 1378 (1394)
T ss_pred             eecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHH-cCCcccc-cccchhhhhHHHHH
Confidence            5431                                            378899998 6777664 99999999999988


Q ss_pred             HHHHHHHHHHHhhh
Q 016271          343 YRLVFLGIVKTVEK  356 (392)
Q Consensus       343 ~~~la~~~l~~~~~  356 (392)
                      + ++++++|+++.|
T Consensus      1379 ~-~~~~~~l~~~~r 1391 (1394)
T TIGR00956      1379 N-IIATVFFYWLAR 1391 (1394)
T ss_pred             H-HHHHHhhheEEE
Confidence            8 778888887643

>PLN03140 ABC transporter G family member; Provisional

Probab=100.00  E-value=2.7e-49  Score=433.71  Aligned_cols=351  Identities=17%  Similarity=0.246  Sum_probs=297.5

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhcc--CCc
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQD--SGA   78 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~~   78 (392)
                      ++||+++||+||++.|||||++|+++.+.. +..+...+.|.....++++++.|++|..+++..++++...+...  ...
T Consensus       426 ~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  504 (1470)
T PLN03140        426 LEFFESCGFKCPERKGTADFLQEVTSKKDQ-EQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAA  504 (1470)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHHhcCchhh-hhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhccccc
Confidence            379999999999999999999998885422 11111111221123356789999999887766665544322211  112


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCh---hhHHHHHHHHHHHHHHHHHH
Q 016271           79 LEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDN---NSIQARGSLLMFVASFLTFM  155 (392)
Q Consensus        79 ~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~---~~~~~~~g~l~~~~~~~~~~  155 (392)
                      ...+++..|++.|++.+++|+++.++||+..+..++++.+++|+++|++|++++.++   .+.+.+.|.+|+.+++.++.
T Consensus       505 ~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~  584 (1470)
T PLN03140        505 LVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFN  584 (1470)
T ss_pred             ccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            234568899999999999999999999999999999999999999999999986432   34566788888888888888


Q ss_pred             hhcccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHH
Q 016271          156 TIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVE  235 (392)
Q Consensus       156 ~~~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      ++..++.+..||++|.||+..++|++++|++|++++++|..++.+++|++++|||+|++++++.|+.|+++++++.+++.
T Consensus       585 ~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~  664 (1470)
T PLN03140        585 GFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAA  664 (1470)
T ss_pred             HHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCC---C---
Q 016271          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD---N---  309 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~---~---  309 (392)
                      +++.+++++++|...|+.++++++.+++++||+++|.++||. || .|++|+||++|++++++.|||.+..+.   |   
T Consensus       665 ~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~-w~-~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~  742 (1470)
T PLN03140        665 GIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPN-WW-EWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDN  742 (1470)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCch-HH-HHHHHhCHHHHHHHHHHHHhccCccccCcccCCC
Confidence            999999999999999999999999999999999999999998 45 459999999999999999999886543   2   


Q ss_pred             -CCCHHHHHhhhhccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          310 -NLDGEQVLRDNWQLQMGY-SKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       310 -~~~g~~~L~~~~~~~~~~-~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                       ..+|+++|+. +|+..++ +.|.++++|++++++|+++++++|++.+
T Consensus       743 ~~~~G~~~L~~-~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~  789 (1470)
T PLN03140        743 STRLGTAVLNI-FDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN  789 (1470)
T ss_pred             CcccHHHHHHh-cCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence             2689999987 7886543 4799999999999999999999999875

>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-47  Score=390.10  Aligned_cols=344  Identities=29%  Similarity=0.534  Sum_probs=285.9

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccCCccc
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE   80 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~   80 (392)
                      ++||+++|+|||++.|||||++|+++.+ ++.+      +.....+.....+.++......+...   ............
T Consensus       259 ~~ff~~~G~~~P~~~Npadf~l~l~s~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  328 (613)
T KOG0061|consen  259 LEFFSSLGFPCPELENPADFLLDLLSVD-SGTR------ELEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLSTSKKV  328 (613)
T ss_pred             HHHHHhCCCCCCCcCChHHHHHHHHccC-CCch------hHHhHHHHHHHhhhccccchhhhhHH---HHhhhccccccc
Confidence            4799999999999999999999999965 1111      01111222223333332111111000   111110001111


Q ss_pred             cccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHhh-cc
Q 016271           81 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTI-GG  159 (392)
Q Consensus        81 ~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~  159 (392)
                      +....++|+.|+..|++|.+++.+|||.+...|+++.+++++++|++|++++.+..+++++.|++++.+....+..+ ++
T Consensus       329 ~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~~~~~~  408 (613)
T KOG0061|consen  329 EIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGIQNRLGLFFFILSFMTFLSMFGA  408 (613)
T ss_pred             ccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            11228999999999999999999999999999999999999999999999998888888999999999888877766 57


Q ss_pred             cchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 016271          160 FPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMM  239 (392)
Q Consensus       160 ~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~  239 (392)
                      ++.|+.||++|.||+.+|+|+.++|++|+.++++|+.++.+++|++++||++|++++...|.+++++.++..+++.++|+
T Consensus       409 i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~  488 (613)
T KOG0061|consen  409 VPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGL  488 (613)
T ss_pred             HHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcC--------CCCC
Q 016271          240 IVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF--------DNNL  311 (392)
Q Consensus       240 ~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~--------~~~~  311 (392)
                      +++++++|...|+.+++++..+++++||++++.+.+|.  |.+|++|+|+++|++|++++|+|.+...        .|..
T Consensus       489 ~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~--~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~  566 (613)
T KOG0061|consen  489 FISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPK--YFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCES  566 (613)
T ss_pred             HHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccH--HHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccc
Confidence            99999999999999999999999999999999999998  4456999999999999999999996222        2347


Q ss_pred             CHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016271          312 DGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMK  358 (392)
Q Consensus       312 ~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~k  358 (392)
                      +|.++++. .+++.++ .|.|+.+++++.++|+++++++|+++.+.+
T Consensus       567 ~~~~~l~~-~~~~~~~-~~~~l~~l~~~~~~~~il~y~~L~~~~~~~  611 (613)
T KOG0061|consen  567 TGEDVLKQ-LGFEDSS-FWLDLLVLLAFIVFFRVLGYLALRFRVKRK  611 (613)
T ss_pred             cHHHHHHh-cCCcccc-cchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            89999999 7776554 999999999999999999999999987754

>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-47  Score=396.15  Aligned_cols=342  Identities=18%  Similarity=0.291  Sum_probs=301.1

Q ss_pred             CchhhhCC-CCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccC---
Q 016271            1 MQFFALNG-FPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDS---   76 (392)
Q Consensus         1 v~yF~~~G-~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---   76 (392)
                      ++||+++| .+||+.+|||||+||+++...+...             -.+|++.|++|+++++++++++.+..+.++   
T Consensus      1024 i~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~~-------------~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~ 1090 (1391)
T KOG0065|consen 1024 IEYFESIGGVKCISDENPAEWMLEVIGAGAEASL-------------SVDFAEIWKNSEEYKRNKELVKELSQPPPGFST 1090 (1391)
T ss_pred             HHHHHhcCCccCCCCCChHHHHHhhccccccccc-------------CccHHHHHhccHHHHHHHHHHHHHhcCCccCCc
Confidence            57999997 8999999999999999987544321             127999999999999999999888776444   


Q ss_pred             CccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHh
Q 016271           77 GALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMT  156 (392)
Q Consensus        77 ~~~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~  156 (392)
                      +...++++.+|+|.|++.+++|+...+||+|.++.+|+++.++.|+++|+.||+.+++.++++|..|++|+.+++.....
T Consensus      1091 ~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~~~q~lqn~m~a~yma~v~~~~~~ 1170 (1391)
T KOG0065|consen 1091 DLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGHNVQGLQNAMGAAYMATVFSGPNN 1170 (1391)
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCCcHHHHHHHHHHHHHHHHHhhhhh
Confidence            22345678999999999999999999999999999999999999999999999999999999999999999877665544


Q ss_pred             hc-ccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHH
Q 016271          157 IG-GFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVE  235 (392)
Q Consensus       157 ~~-~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      .. ..+.+..||..++||+.+|+|+..+|++|++++|+|+.++++++|.++.|+++|+.+++.+++.+++.++++.+...
T Consensus      1171 ~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~ 1250 (1391)
T KOG0065|consen 1171 NQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFT 1250 (1391)
T ss_pred             hhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHH
Confidence            33 45667788888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCC-----
Q 016271          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN-----  310 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~-----  310 (392)
                      .+|+++..++||.+.|+.+.+.+......|||++.|...||. ||.| ++|+||++|.+++++..++++.+..|.     
T Consensus      1251 ~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~-fW~w-my~lsP~ty~l~gli~~~~~d~~v~c~~~e~~ 1328 (1391)
T KOG0065|consen 1251 TLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPK-FWIW-MYYLSPVTYTLEGLISSQLGDVEVTCEDSEMN 1328 (1391)
T ss_pred             HHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccc-eeee-eeecCcHHHHHHHHHHHHhCCCceeeecCCcc
Confidence            999999999999999999999999999999999999999998 7875 999999999999999999999988775     


Q ss_pred             -------CCHHHHHhhhhc----cccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016271          311 -------LDGEQVLRDNWQ----LQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMK  358 (392)
Q Consensus       311 -------~~g~~~L~~~~~----~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~k  358 (392)
                             .+..++++.++|    +..+. ....-.+...+.+.+..++.+.+|+.+++|
T Consensus      1329 ~~~pp~g~tcge~m~~~~~~~~Gy~~n~-~a~~~c~~c~y~v~~~~l~~f~~~y~~~wr 1386 (1391)
T KOG0065|consen 1329 YFDPPSGQTCGEFMEDFFGEGTGYLHNP-LATTACVYCAYTVADAFLAAFNIKYLNFWR 1386 (1391)
T ss_pred             ccCCCCCcCHHHHHHHHhccCcceeccC-cceeEEEEeeeehHHHHHHHHHHHHHHHHH
Confidence                   456788998887    44443 333333555788999999999999988755

>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-45  Score=383.67  Aligned_cols=351  Identities=22%  Similarity=0.383  Sum_probs=307.6

Q ss_pred             CchhhhCCCCCCCCCCchHHHHHhhcCCchhhhhhccCCCCCcHHHHHHHHHHHhcCHhHHHHHHHHHHHHhhccC--Cc
Q 016271            1 MQFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDS--GA   78 (392)
Q Consensus         1 v~yF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~   78 (392)
                      ++||+++|+.||++.++|||+.++.+.. ++...+.....+......+++.+.|++|+.+++...+++...++...  ..
T Consensus       350 ~~yFe~~Gf~cP~r~~~ADfLt~vts~k-~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~a  428 (1391)
T KOG0065|consen  350 LPYFEDMGFKCPPRKGTADFLTEVTSKK-DQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAA  428 (1391)
T ss_pred             HHHHHhcCccCCCccCHHHHHHHhhcCc-cccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchh
Confidence            4799999999999999999998888732 22221111212333344578999999999998888887776554322  33


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCC-CChhhHHHHHHHHHHHHHHHHHHhh
Q 016271           79 LEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLG-TDNNSIQARGSLLMFVASFLTFMTI  157 (392)
Q Consensus        79 ~~~~~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~-~~~~~~~~~~g~l~~~~~~~~~~~~  157 (392)
                      ...+++..+.|.|++.+++|.+..+.||..++....++.+++++++|++|++.+ .+..+.+.+.|++|+.+++.++.++
T Consensus       429 l~s~~y~v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~~t~~~~~~~~~~lffsll~~~f~~l  508 (1391)
T KOG0065|consen  429 LVSSKYSVPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPMSTTSGGYSRGGALFFALLFNLFNGL  508 (1391)
T ss_pred             hcCCceeccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccCcccccchhhhhHHHHHHHHHHHHhH
Confidence            566789999999999999999999999999999999999999999999999998 6777888999999999999999998


Q ss_pred             cccchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHH
Q 016271          158 GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESL  237 (392)
Q Consensus       158 ~~~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~  237 (392)
                      ..++.....|++|.|+|....|+++++.++..+.++|..++.++++.++.|++.|+.++++.|+.++++++++..++.++
T Consensus       509 aEi~~~~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~l  588 (1391)
T KOG0065|consen  509 AEIALTFQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGL  588 (1391)
T ss_pred             HHHHHHHhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            88998999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCC-------
Q 016271          238 MMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN-------  310 (392)
Q Consensus       238 g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~-------  310 (392)
                      ..+++.++++...|+..+.+.+....+++|+++|..+||+  |.+|++|++|+.|++|+++.|||++++++|.       
T Consensus       589 Fr~ia~l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~--W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~  666 (1391)
T KOG0065|consen  589 FRFIASLSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPP--WFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYD  666 (1391)
T ss_pred             HHHHHHhcchHHHHhhHhHHHHHHHHHHcceeeeccccch--HHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccc
Confidence            9999999999999999999999999999999999999998  6667999999999999999999999988874       


Q ss_pred             --------------------CCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          311 --------------------LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       311 --------------------~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                                          ..|.+++...++++..+ .|++++++++|.++|.++..+++.+.+
T Consensus       667 n~~~~~~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~-~Wr~~gillgf~v~f~~~~~ia~~yl~  730 (1391)
T KOG0065|consen  667 NISIENKVCAATGATLGNDYVSGRDYLKVQYQYEYKW-YWRNFGILLGFTVFFNFVFLIALEYLK  730 (1391)
T ss_pred             ccccccccchhhccccCceEEecccccccccccccce-eEeehhHHHHHHHHHHHHHHHHHHhcC
Confidence                                23445555545555554 999999999999999999999998875

>PF01061 ABC2_membrane: ABC-2 type transporter; InterPro: IPR013525 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=99.88  E-value=2.1e-24  Score=192.60  Aligned_cols=208  Identities=27%  Similarity=0.366  Sum_probs=183.9

Q ss_pred             HHHHHHHHHHHHHhhcChhHH-HHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHhh-cccchhHHHH
Q 016271           90 TQCIVLTSRSFVNMYRDLGYY-WFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTI-GGFPSFVEDM  167 (392)
Q Consensus        90 ~Q~~~L~~R~~~~~~R~~~~~-~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~~~~~~er  167 (392)
                      +|++.+++|+++..+|||... ...++.++++++++|.++.+.+++.++. ++.++++..+...++... .......+||
T Consensus         1 ~q~~~l~~r~~~~~~r~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (210)
T PF01061_consen    1 RQIWALLRREFKRFWRNPFLGLIWSLIFPLLLLLIFGFIFGKLGNSQDGF-NRPGLIFGSIIFSFFSSISGSSISFERER   79 (210)
T ss_pred             CHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHHHHHHHHhccccccccc-ccceeeehhhHHhhhhhcccchhhhhhhc
Confidence            599999999999999999887 8999999999999999999887444444 667777666666664444 3447788999


Q ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 016271          168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPN  247 (392)
Q Consensus       168 ~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~  247 (392)
                      ..+.||+.++.|++..|+++|.+.+++..++..+++..+.+++.|++.+  +++.+++.++++..+..++|.+++.++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~g~~~~~~~~~  157 (210)
T PF01061_consen   80 GTLERERASPLYSPFAYLLAKVLSAFLISLIISLIVLIIAYLLFGLDFE--SFFLFLLILLLSILCSSGLGLLLAALFPS  157 (210)
T ss_pred             cccccccccccccchhhheeeccccccccccccchhhhhhhhhhccccc--cchheecccccccccccccccccccchhh
Confidence            9999999999999999999999999999999999999999999899876  66778888888899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhc
Q 016271          248 YLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF  302 (392)
Q Consensus       248 ~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~  302 (392)
                      .+.+..+.+.+..+++++||.++|.+.+|+  |.+|+.+++|++|++|++..++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~sg~~~p~~~lP~--~~~~i~~~~P~~~~~~~~r~~~f  210 (210)
T PF01061_consen  158 FRDASAISSLILLLLFFLSGVFFPLSSLPS--WLRWISYLNPLTYAVEALRAALF  210 (210)
T ss_pred             hhhhhhhhhhcccccccceeeecchHHChH--HHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999997  66679999999999999988765

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). A number of bacterial transport systems have been found to contain integral membrane components that have similar sequences []: these systems fit the characteristics of ATP-binding cassette transporters []. The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport. Hydropathy analysis of the proteins has revealed the presence of 6 possible transmembrane regions. These proteins belong to family 2 of ABC transporters.; GO: 0016020 membrane

>TIGR01291 nodJ ABC-2 type transporter, NodJ family

Probab=99.76  E-value=2.2e-16  Score=145.36  Aligned_cols=239  Identities=13%  Similarity=0.053  Sum_probs=170.3

Q ss_pred             HHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHhccCCC---ChhhHHH-HHHHHHHHHHHHHHHhhcccchhHH
Q 016271           91 QCIVLTSRSFVNMYRD-LGYYWFRLGVYVLLGVGLATVFSNLGT---DNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVE  165 (392)
Q Consensus        91 Q~~~L~~R~~~~~~R~-~~~~~~~~~~~~~~~ll~g~~f~~~~~---~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~  165 (392)
                      +...+.+|+++.++|+ |..++..+++|+++.+++|..+....+   +.+..+. ..|++.+.++..+... .....+.+
T Consensus         6 ~~~~~~~R~~~~~~r~~~~~~~~~~~~P~~~l~~fg~~~~~~~~~~~g~~y~~f~~pg~l~~~~~~~~~~~-~~~~~~~~   84 (253)
T TIGR01291         6 NWAAVWRRNALAWKKVAAASVLGNLADPLIYLFGLGVGLGKMVGSVDGVSYAAFLAAGMVATSAMTASTFE-TIYATFAR   84 (253)
T ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            3566789999999999 999999999999999999999875422   1122211 2244444333333211 11122233


Q ss_pred             --HHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          166 --DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVAS  243 (392)
Q Consensus       166 --er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~  243 (392)
                        |+..++|-+.... ++..++++|++.+....+++.++...+.+ ..|... ..++.....+.++..+++.++|.+++.
T Consensus        85 ~r~~g~~~~l~~~Pv-~~~~~~~g~~~~~~~~~~~~~~ii~~~~~-~~g~~~-~~~~l~~~~~~ll~~l~~~~lg~~~a~  161 (253)
T TIGR01291        85 MRVTRTWEAMLYTPI-TVGDIVLGEVAWAATKASLAGTIIGVVTA-TLGYIE-WWSLIYILPVIALTGLAFASLSMLVAA  161 (253)
T ss_pred             HHHcccHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhch-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              3334445554544 89999999999998888888776555554 344433 234554555566677888899999999


Q ss_pred             hcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhcc
Q 016271          244 LVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQL  323 (392)
Q Consensus       244 ~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~  323 (392)
                      ..++.+.+..+...+..|++++||.+.|.+.+|+  |.+++.+++|++|+.|++-...+.+ +                 
T Consensus       162 ~~~~~~~~~~i~~~i~~pl~flSg~~~P~~~mP~--~lq~i~~~nPlt~~v~~~R~~~~g~-~-----------------  221 (253)
T TIGR01291       162 LAPSYAYFAFYQSLVITPMLFLSGVVFPVFQLND--VIQGMTHFLPLAHSIDDIRPVMLGG-P-----------------  221 (253)
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHHHhcCHHhChH--HHHHHHHHCcHHHHHHHHHHHHhCC-C-----------------
Confidence            9999999888889999999999999999999998  7777999999999999976654322 1                 


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          324 QMGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       324 ~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                       .. +.+.+++++.++.+++..++...+|++.
T Consensus       222 -~~-~~~~~~~~l~~~~vv~~~la~~~fr~~~  251 (253)
T TIGR01291       222 -GT-QVGLHLGALCLYAVVPFFISAALLRRRL  251 (253)
T ss_pred             -cH-HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence             11 2567788899999988888877666543

Nearly all members of this subfamily are NodJ which, together with NodI (TIGR01288), acts to export a variety of modified carbohydrate molecules as signals to plant hosts to establish root nodules. The seed alignment includes a highly divergent member from Azorhizobium caulinodans that is, nonetheless, associated with nodulation. This model is designated as subfamily in part because not all sequences derived from the last common ancestral sequence of Rhizobium sp. and Azorhizobium caulinodans NodJ are necessarily nodulation proteins.

>TIGR01247 drrB daunorubicin resistance ABC transporter membrane protein

Probab=99.73  E-value=5e-16  Score=141.67  Aligned_cols=227  Identities=13%  Similarity=0.039  Sum_probs=163.2

Q ss_pred             HHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccC-CC----C-hhhHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 016271           98 RSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNL-GT----D-NNSIQ-ARGSLLMFVASFLTFMTIGGFPSFVEDMKVF  170 (392)
Q Consensus        98 R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~-~~----~-~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~er~~~  170 (392)
                      |+++..+|||..+...+++|+++.+++|.++... +.    + .+..+ -..|++.+.....+... .......+|+..+
T Consensus         1 re~~~~~r~~~~~~~~l~~Pl~~~~~~~~~~~~~~~~~~~~~g~~y~~fl~~G~~~~~~~~~~~~~-~~~~~~~~~~g~~   79 (236)
T TIGR01247         1 RELKRFIRSRSRIVGSILNPLLWLIFFGKGWSGAFRFPMIFGGVDYMTYLVPGIVAMTVFNMSFFS-GISVIWDRQFGFL   79 (236)
T ss_pred             CchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhCHH
Confidence            7788999999999999999999999999988653 11    1 11111 12244433322222211 1111122333333


Q ss_pred             HHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Q 016271          171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLT  250 (392)
Q Consensus       171 ~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~  250 (392)
                      .|=.. ...+...|+++|.+.+.+..+++.++...+.+++.+.+.  ..++...+..++.+.+..++|.+++...+|.+.
T Consensus        80 ~~~~~-~P~~~~~~~l~~~l~~~~~~~~~~~i~~~i~~~~~~~~~--~~~~~~~~~~~l~~~~~~~lg~~l~~~~~~~~~  156 (236)
T TIGR01247        80 KEILV-APASRVEMIVGRILGGSTVAMIQGAIILALSFIVAILKP--SGVIPTLVLAFIVGVALSGLGVAIAARMDSMEG  156 (236)
T ss_pred             HHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            34333 344899999999999999999999888888887766553  344445555666777889999999999999998


Q ss_pred             HHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccccCchhH
Q 016271          251 GIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKW  330 (392)
Q Consensus       251 a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~  330 (392)
                      ++.+.+.+..++.++||.++|.+.+|+  |.+|+.+++|.+|+.|++......+..                  .. +.+
T Consensus       157 ~~~i~~~~~~~l~~lsG~~~P~~~~P~--~~~~i~~~~P~~~~~~~~r~~~~~~~~------------------~~-~~~  215 (236)
T TIGR01247       157 FQIIMSMLMLPMFFLSGAFYPITTMPA--WMQGLAKINPLTYAVDGARYYLAGVSP------------------TF-PLE  215 (236)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCHHhCHH--HHHHHHHHCcHHHHHHHHHHHHhCCCc------------------cc-chH
Confidence            888888889999999999999999998  667799999999999997654432211                  11 377


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 016271          331 VDLAILFGMVVFYRLVFLG  349 (392)
Q Consensus       331 ~~~~iL~~~~v~~~~la~~  349 (392)
                      .++++++++.+++.+++..
T Consensus       216 ~~~~~l~~~~~~~~~l~~~  234 (236)
T TIGR01247       216 QDLLVLTLLAVIFVGIAAV  234 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8899999999998888754

This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.

>TIGR03861 phenyl_ABC_PedC alcohol ABC transporter, permease protein

Probab=99.70  E-value=4.8e-15  Score=136.64  Aligned_cols=235  Identities=11%  Similarity=0.020  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccC-CC------Ch--hh-HHHHHHHHHHHHHHHHHHhhcc
Q 016271           90 TQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNL-GT------DN--NS-IQARGSLLMFVASFLTFMTIGG  159 (392)
Q Consensus        90 ~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~-~~------~~--~~-~~~~~g~l~~~~~~~~~~~~~~  159 (392)
                      .++.++++|+++.+.|||..+...+++|+++.+++|.+|... +.      +.  +. ..-..|++.+.....++.. +.
T Consensus         2 ~~~~~l~~rel~~~~r~~~~~~~~ll~Pl~~l~~f~~~f~~~~~~~~~~~~~~~~~y~~fl~pGi~~~~~~~~~~~~-~~   80 (253)
T TIGR03861         2 ICFNGIVLREALRFVQQRSRFLSALVRPLLWLLVFAAGFRAALGISIIEPYDTYITYEVYIVPGLCCMILLFNGMQS-SL   80 (253)
T ss_pred             hHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHh-hh
Confidence            678999999999999999999999999999999999998643 11      10  11 1122344333332222221 11


Q ss_pred             cchhHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 016271          160 FPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMM  239 (392)
Q Consensus       160 ~~~~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~  239 (392)
                      .....+|+....+-+.... ++..+.++|++......+++.++...+.+ ..|.+.+...++.....+++..++..++|+
T Consensus        81 ~~~~~r~~g~~~~l~~~p~-~~~~~~l~~~l~~~~~~~~~~~i~~~~~~-~~g~~~~~~~~l~~~~~~~l~~~~~~~lgl  158 (253)
T TIGR03861        81 SMVYDREMGSMRVLLTSPL-PRPFLLFCKLLASALISLLQVYAFLAIAA-LVGVQPPVWGYVSVLPALVLVAFMLGALGL  158 (253)
T ss_pred             HhHHhHhcCHHHHHhhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            1122333334555555555 89999999999999888888766555554 346655444444444455667777889999


Q ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCC---CccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHH
Q 016271          240 IVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDL---PHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQV  316 (392)
Q Consensus       240 ~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~i---P~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~  316 (392)
                      +++.++++.+.+..+.+.+..+++++||.+.|.+.+   |+  |.+|+.++||++|..|++-....++            
T Consensus       159 ~la~l~~~~~~~~~i~~~~~~~l~flSgi~~p~~~~~~~p~--~l~~i~~~nPl~~~i~~~R~~~~g~------------  224 (253)
T TIGR03861       159 ALSNLIRQLENFAGVMNFVIFPMFFLSSALYPLWKMQEAST--WLYWICALNPFTHAVELVRFALYGQ------------  224 (253)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHhhHhhhhhhcccccH--HHHHHHHhCcHHHHHHHHHHHHhCC------------
Confidence            999999998888888888888999999999999877   55  7777999999999999986543211            


Q ss_pred             HhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          317 LRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVK  352 (392)
Q Consensus       317 L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~  352 (392)
                                . .|..++++.++.+++..++...+|
T Consensus       225 ----------~-~~~~~~~~~~~~~v~~~~~~~~fr  249 (253)
T TIGR03861       225 ----------L-NLPALGWTLGATTLFTLLAFWGFD  249 (253)
T ss_pred             ----------c-chhHHHHHHHHHHHHHHHHHHHhh
Confidence                      1 244556677777777777766544

Members of this protein family, part of a larger class of efflux-type ABC transport permease proteins, are found exclusively in genomic contexts with pyrroloquinoline-quinone (PQQ) biosynthesis enzymes and/or PQQ-dependent alcohol dehydrogenases, such as the phenylethanol dehydrogenase PedE of Pseudomonas putida U. Members include PedC, an apparent phenylethanol transport protein whose suggested role is efflux to limit intracellular concentrations of toxic metabolites during phenylethanol catalysis.

>TIGR00025 Mtu_efflux ABC transporter efflux protein, DrrB family

Probab=99.70  E-value=2.8e-15  Score=136.35  Aligned_cols=222  Identities=13%  Similarity=0.020  Sum_probs=147.4

Q ss_pred             hcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHH-HHHHHHHHHHHHHHHhhcccchhHHHH--HHHHHHhcCCCCc
Q 016271          104 YRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVEDM--KVFERERLNGHYG  180 (392)
Q Consensus       104 ~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~er--~~~~rE~~~g~Y~  180 (392)
                      +|||......+.+|+++.++++.++.+.. ..+..+. ..+.+-+..+..+...  .-.....||  ..+.|-+.... +
T Consensus         2 ~r~p~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~er~~G~l~rl~~~P~-~   77 (232)
T TIGR00025         2 LRVGAQIILTMFIPITFMVGLNLLPGGSV-THNRGATFIPVLMALAAISTAFTG--QAIAVARDRRYGALKRLGATPL-P   77 (232)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcCCcc-CCcchhHhhHHHHHHHHHHHHHHH--HHHHHHHHHHhCHHHHHhcCCC-c
Confidence            69999999999999999999998887632 1122222 2233322222222211  112223344  34555555544 9


Q ss_pred             hHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHH
Q 016271          181 ATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVP---NYLTGIITGAG  257 (392)
Q Consensus       181 ~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~---~~~~a~~~~~~  257 (392)
                      +..|+++|++...+..+++..+..++ +++.|++..... ...++...+.......++.+++.+.+   +.+.+..+...
T Consensus        78 ~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~  155 (232)
T TIGR00025        78 RLGILAGRSLAVVARVFLQTLILLVI-GFVLGFRFAGGA-LTALTLGAVIIALGTALFAALGLVAGGTLQAEIVLAVANL  155 (232)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCcCCch-HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence            99999999998888887776555544 456788754332 23333333344445566666666654   44555777788


Q ss_pred             HHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccccCchhHHHHHHHH
Q 016271          258 IQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILF  337 (392)
Q Consensus       258 ~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~~~~~iL~  337 (392)
                      ..++++++||.++|.+.+|+  |.+|+++++|++|+.+++.....++.+.                  . ..+.++++++
T Consensus       156 ~~~p~~~lSG~~~P~~~mP~--~lq~i~~~~P~t~~~~~~r~~~~~~~~~------------------~-~~~~~~~~l~  214 (232)
T TIGR00025       156 VWFIFALLSAGLVPLNLIPT--WIKWFVRVQPSSYATEALRQAATVSVDT------------------F-GAVRDLVVVL  214 (232)
T ss_pred             HHHHHHHHhheeeecccccH--HHHHHHHhCcHHHHHHHHHHHHcCCCCh------------------h-hHHHHHHHHH
Confidence            88899999999999999998  7788999999999999987664433221                  1 3788888899


Q ss_pred             HHHHHHHHHHHHHHH
Q 016271          338 GMVVFYRLVFLGIVK  352 (392)
Q Consensus       338 ~~~v~~~~la~~~l~  352 (392)
                      ++.+++..++...+|
T Consensus       215 ~~~~v~~~la~~~~~  229 (232)
T TIGR00025       215 AFWVALAALAAIRLR  229 (232)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999888887766544

This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.

>PRK15066 inner membrane transport permease; Provisional

Probab=99.64  E-value=1e-13  Score=128.03  Aligned_cols=244  Identities=11%  Similarity=0.077  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHHHHhhcChhH-HHHHHHHHHHHHHHHHHHhccC-CC--ChhhH-HHHHHHHHHHHHHHHHHhhcccch
Q 016271           88 FLTQCIVLTSRSFVNMYRDLGY-YWFRLGVYVLLGVGLATVFSNL-GT--DNNSI-QARGSLLMFVASFLTFMTIGGFPS  162 (392)
Q Consensus        88 ~~~Q~~~L~~R~~~~~~R~~~~-~~~~~~~~~~~~ll~g~~f~~~-~~--~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~  162 (392)
                      .++-++.+.+|+++.+.||+.. +..-++++.++.+++|.++... ++  +.+.. .-..|++.+.....+...  +...
T Consensus         6 ~~~~~~~l~~re~~~~~r~~~~~ll~pli~~~~~~~vfg~~~~~~~~~~~~~~y~~fl~pGll~~~~~~~~~~~--~~~~   83 (257)
T PRK15066          6 YWIALKTIVRKEIRRFLRIWVQTLVPPVITMTLYFLIFGNLIGSRIGEMGGFSYMQFIVPGLIMMSVITNSYSN--VASS   83 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence            4677889999999999999854 4445566666777777665422 11  11111 122344433332222211  1122


Q ss_pred             hHHHH--HHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 016271          163 FVEDM--KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       163 ~~~er--~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                      +.++|  ...+|=..+. .++..+.+++++......+++.++...+.+...|.+..  .........++........|++
T Consensus        84 i~~~~~~~~~~~l~vtp-~~~~~~~~~~il~~~~~~~~~~~iil~i~~~~~~~~~~--~~~~~l~~~ll~~~~f~~~gl~  160 (257)
T PRK15066         84 FFSAKFQRNIEELLVSP-VPNHVIILGYVGGGVARGLCVGILVTLISLFFVPLQVH--HWGIVLLTVLLTAILFSLGGLI  160 (257)
T ss_pred             HHHHHHhhhHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh--HHHHHHHHHHHHHHHHHHHHHH
Confidence            22233  2222333334 48899999999998888777776666665555566532  2333333334444444556888


Q ss_pred             HHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhh
Q 016271          241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDN  320 (392)
Q Consensus       241 i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~  320 (392)
                      ++...++.+....+.+.+..+++++||.+.|.+++|+  |.+++.+++|++|..|++-...+.+.               
T Consensus       161 ~a~~~~~~~~~~~i~~~~~~pl~flSgi~~p~~~lP~--~l~~i~~~nPlt~~v~~~R~~~~g~~---------------  223 (257)
T PRK15066        161 NAVFAKSFDDISIIPTFVLTPLTYLGGVFYSISLLPP--FWQGVSKLNPIVYMVNAFRYGFLGIS---------------  223 (257)
T ss_pred             HHHHHccHHHHHHHHHHHHHHHHHHcchhccHHhChH--HHHHHHHHCcHHHHHHHHHHHHcCCC---------------
Confidence            8888888877788888888999999999999999998  77789999999999999976544211               


Q ss_pred             hccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016271          321 WQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMK  358 (392)
Q Consensus       321 ~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~k  358 (392)
                           +.+.|.++++++++.+++..++...+|+.++.|
T Consensus       224 -----~~~~~~~l~~l~~~~~v~~~la~~~~~r~~~~~  256 (257)
T PRK15066        224 -----DVPLWLAFAVLLVFIVVLYLLAWYLLERGRGLR  256 (257)
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence                 113688889999999999999888777665543

>TIGR03062 pip_yhgE_Cterm YhgE/Pip C-terminal domain

Probab=99.57  E-value=4.1e-14  Score=126.52  Aligned_cols=151  Identities=13%  Similarity=0.043  Sum_probs=123.9

Q ss_pred             CchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 016271          179 YGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGI  258 (392)
Q Consensus       179 Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~  258 (392)
                      -+.+.++++|.+...+..+++.++...+.+++.|++..  +++.+++..++.++++.++|.+++.++++...+.  ....
T Consensus        57 ~~~~~~~~~k~~~~~~~~~~~~~~~~~i~~~~~g~~~~--~~~~~~l~~~l~~~~~~~lg~~l~~~~~~~~~~~--~~~~  132 (208)
T TIGR03062        57 ARSWRIALAKLLPGGLIGVLQAIILYGVLILGLGLDPA--HPPATFGFAILTSLTFMAIIQFLVALFGNVGRFL--ALVL  132 (208)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHH--HHHH
Confidence            37788999999999999999999999999988898753  5677778888899999999999999998765443  3334


Q ss_pred             HHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccccCchhHHHHHHHHH
Q 016271          259 QGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAILFG  338 (392)
Q Consensus       259 ~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~~~~~iL~~  338 (392)
                      ..++++++|.++|.+.+|+  |.+|+++++|++|+.+++....+.+.                    ..+.|.+++++++
T Consensus       133 ~~~~~~~sG~~~P~~~~P~--~~~~i~~~~P~t~~~~~~r~~~~~~~--------------------~~~~~~~~~~L~~  190 (208)
T TIGR03062       133 LVLQLGSSGGTFPIELLPA--FFQAIHPFLPMTYSVNGLRQLISGGN--------------------DGTLWQAVAVLLL  190 (208)
T ss_pred             HHHHHccCCCccchhhCHH--HHHHhhhhCcHHHHHHHHHHHHhCCc--------------------HHHHHHHHHHHHH
Confidence            4566777898999999998  66779999999999999977665431                    1137889999999


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 016271          339 MVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       339 ~~v~~~~la~~~l~~~~  355 (392)
                      +.+++.+++...+|+++
T Consensus       191 ~~~v~~~la~~~~~~~~  207 (208)
T TIGR03062       191 ILVVFLALSLLSARRKR  207 (208)
T ss_pred             HHHHHHHHHHHHHhhhc
Confidence            99999999988777554

This family contains the C-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03061, represents the conserved N-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.

>TIGR01248 drrC daunorubicin resistance protein C

Probab=99.26  E-value=6.4e-11  Score=100.26  Aligned_cols=132  Identities=11%  Similarity=-0.003  Sum_probs=101.6

Q ss_pred             hHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchh--HHHHHHHHHHHHHHHHHHHHHH
Q 016271          163 FVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQ--HFTYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       163 ~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~--~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                      ..+|+..++|-+.+.. ++++++++|++......+++.++...+.+. .|++.+.+  ....+.++..+.......++..
T Consensus        14 ~dr~~G~~~~l~~tP~-~~~~~~~g~~l~~~~~~~~~~~ii~~v~~~-~g~~~~~~~~~~~~~~~~~~l~~~~f~~l~~~   91 (152)
T TIGR01248        14 IDREIGLLSRLWVLPI-HRASALLARIIAETIRAFIGTILILAIALA-LGFRFRNGVAAALLFLLIPSIFGIAFAALVMA   91 (152)
T ss_pred             HHHHhHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456667777777776 999999999999999999998888888854 58876532  1223333334556667777777


Q ss_pred             HHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHh
Q 016271          241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFK  299 (392)
Q Consensus       241 i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~  299 (392)
                      ++...++.+..+. ...+.+|+.++||.+.|.+++|+  |.+|+.+++|++|+.+++-.
T Consensus        92 ~a~~~~~~~~~~~-~~~v~~pl~flsg~~~P~~~mP~--wlq~ia~~~Plt~~~~~~R~  147 (152)
T TIGR01248        92 MALRKEGRFAMEA-LELAQAAAAFLNPGATPIKLFPD--WAQPLIAHQPISPAIEACAD  147 (152)
T ss_pred             HHHHcCCHHHHHH-HHHHHHHHHHHhhhhcCHHhCcH--HHHHHHhhCCccHHHHHHHH
Confidence            7766666665443 46678899999999999999998  99999999999999999864

The model describes daunorubicin resistance protein C in bacteria. This protein confers the function of daunorubicin resistance. The protein seems to share strong sequence similarity to UvrA proteins, which are involved in excision repair of DNA. Disruption of drrC gene showed increased sensitivity upon exposure to duanorubicin. However it failed to complement uvrA mutants to exposure to UV irradiation. The mechanism on how it confers duanomycin resistance is unclear, but has been suggested to be different from DrrA and DrrB which are antiporters.

>COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms]

Probab=99.24  E-value=1.1e-09  Score=101.78  Aligned_cols=169  Identities=19%  Similarity=0.216  Sum_probs=123.5

Q ss_pred             HHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 016271          165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVA-S  243 (392)
Q Consensus       165 ~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~-~  243 (392)
                      +++..+.|-..+.. +...+++++.+.......+...+...+..++.|.. ....+......+.+......++|.+++ .
T Consensus       115 ~~~g~~~~~~~sp~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~lg~~~~~~  192 (286)
T COG0842         115 REFGTLERLLVSPV-SRLFILLGKIVPYLVVASLIAGLVLLVIAFLLGVP-FLGSLLLLLLLLLLLLLATVALGLLLSTF  192 (286)
T ss_pred             HhhCcHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444555555555 54666677777666666666666666666667743 334555556666667777778888666 3


Q ss_pred             hcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhcc
Q 016271          244 LVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQL  323 (392)
Q Consensus       244 ~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~  323 (392)
                      ..++.+.+......+..++.++||.++|.+.+|+  |.+++.++.|.+|+.+++......+...                
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~g~~~p~~~~p~--~~~~i~~~~P~t~~~~~~~~~~~~~~~~----------------  254 (286)
T COG0842         193 AKSQLQCASAVGNLLILPLGFLSGVFFPLELLPA--WLQGISYINPLTYAIDALRYVYLGGWRN----------------  254 (286)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHccccCchhhhHH--HHHHHHHHccHHHHHHHHHHHHhCCCch----------------
Confidence            5566777878888888999999999999999998  7778999999999999998776544322                


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016271          324 QMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEK  356 (392)
Q Consensus       324 ~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~  356 (392)
                         .+.+.++++++++.+++.+++...+|++++
T Consensus       255 ---~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~  284 (286)
T COG0842         255 ---DGIWISLLILLLFAVVFLLLGLLLLRRRRK  284 (286)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence               127888999999999999999988887665

>TIGR03518 ABC_perm_GldF gliding motility-associated ABC transporter permease protein GldF

Probab=98.92  E-value=3.8e-07  Score=83.24  Aligned_cols=218  Identities=15%  Similarity=0.090  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcc---CCCChhhHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Q 016271           93 IVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSN---LGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKV  169 (392)
Q Consensus        93 ~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~---~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~er~~  169 (392)
                      +++.||+++.+.|+|..+..-.+..++.|+.......+   ...+..+.+.-.+...+.  +.....+.+..       .
T Consensus         2 ~~i~~kEl~~~f~sp~~yv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~p~l~~~-------~   72 (240)
T TIGR03518         2 KAIFKKEFNSFFSSPIGYLVIAVFLLANGLFLWVFPGDFNILDYGYADLTPFFSLAPWV--FLFLIPAITMR-------S   72 (240)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhHHhcCcchHHHHHHHHHHH--HHHHHHHHHHH-------H
Confidence            57899999999999998877666666666442211111   111122222212211111  11111111222       3


Q ss_pred             HHHHhcCCC--------CchHHHHHHHHHHHhhHHHHHHhh---hhhhhhcccCC---ccchhHHHHHHHHHHHHHHHHH
Q 016271          170 FERERLNGH--------YGATAFVFGNTFSALPYLALISLI---PGAIVYDLPGL---HKGYQHFTYFVLLLFACMLLVE  235 (392)
Q Consensus       170 ~~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i---~~~i~y~~~g~---~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      +-+||++|+        -++..++++|.+......++..+.   +..... ..|.   ..+.+.+....+..++...+..
T Consensus        73 ia~Er~~GTle~Llt~Pvs~~~ivlgK~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  151 (240)
T TIGR03518        73 FAEERKLGTLELLLTRPISDWQIILGKYLGSLTLVILALLPTLLYVFTIY-QLGNPVGNLDIGSTFGSYIGLLLLGSVYT  151 (240)
T ss_pred             HHHHHHcCHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence            344555544        489999999999987654443321   111111 1222   2245555555555566777889


Q ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCC--CccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCH
Q 016271          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDL--PHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDG  313 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~i--P~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g  313 (392)
                      ++|.++|+++++...+..++..+...+.  .|... ..++  |+  |.+|+.+++|.+|..+.. +..+           
T Consensus       152 aig~~iSsl~~~q~~a~~~~~~~~~~l~--~~~~~-l~~~~~~~--~~~~l~~~sp~~~~~~~~-~g~i-----------  214 (240)
T TIGR03518       152 AIGLFASSLTENQIVAFIIAVFLCFLFY--FGFDG-LASLLWGG--SAYTISELGLSYHYESIS-RGVI-----------  214 (240)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHHHH--HHHHH-Hhhhcchh--HHHHHHHcCHHHHHHHHH-cCcc-----------
Confidence            9999999999998887665544332222  22211 2333  54  667799999988876644 1111           


Q ss_pred             HHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          314 EQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVK  352 (392)
Q Consensus       314 ~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~  352 (392)
                                     .+.++...+.+++++..++...++
T Consensus       215 ---------------~~~~~v~~~~~~~~~l~l~~~~~~  238 (240)
T TIGR03518       215 ---------------DSRDVIYFLSITVLFLALTKLQLK  238 (240)
T ss_pred             ---------------cHhHHHHHHHHHHHHHHHHHHHHh
Confidence                           245566777777777777766554

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.

>COG1682 TagG ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]

Probab=98.92  E-value=4.7e-07  Score=83.23  Aligned_cols=236  Identities=16%  Similarity=0.092  Sum_probs=141.8

Q ss_pred             HHHHHHHHHHHHHHhhcChh-HHHHHHHHHHHHHHHHHHHhccCCCC---hhhHHHHHHHHHHHHHHHHHHhhcccchhH
Q 016271           89 LTQCIVLTSRSFVNMYRDLG-YYWFRLGVYVLLGVGLATVFSNLGTD---NNSIQARGSLLMFVASFLTFMTIGGFPSFV  164 (392)
Q Consensus        89 ~~Q~~~L~~R~~~~~~R~~~-~~~~~~~~~~~~~ll~g~~f~~~~~~---~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  164 (392)
                      +..++.|.+|+++...|+.. ...-.++.|.++.++++.+|...-..   .-...-..|++.+.....+.  ..+...+.
T Consensus        17 ~~li~~L~~~eik~Ryr~s~LG~~W~~l~P~~~~~~~~~vf~~l~~~~~~~~~~~l~~G~~~w~f~~~~i--~~~~~s~~   94 (263)
T COG1682          17 RRLIGALVKREIKTRYRRSVLGYLWSLLNPLLMILVYTLVFGALLRSPGLNFLAYLLAGLILWFFFSEAI--SEGAGSVV   94 (263)
T ss_pred             HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHH--HhHHHHhh
Confidence            45677789999998777654 34446677777777777777654221   11122233443222111110  01222223


Q ss_pred             HHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016271          165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASL  244 (392)
Q Consensus       165 ~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~  244 (392)
                      .+.+.+.+-+    .++..+.+++++.++....+..++.....-+. |..+ ..++........+..+.+.++|+++|.+
T Consensus        95 ~n~~li~k~~----~p~~~~~~~~~~~~~~~~~i~~iiil~~~i~~-~~~~-s~~~l~~~~~l~~l~l~~~g~~l~~a~l  168 (263)
T COG1682          95 ANAALIKKIN----FPPLILPVARTLSRLFNFLIHLIIILIFLIIL-GVEP-SWHWLLLLPALLLLILFSVGLGLILASL  168 (263)
T ss_pred             hhHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            3333333221    27889999999999887777765554444433 3333 3455555555555666677778888776


Q ss_pred             cchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccc
Q 016271          245 VPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQ  324 (392)
Q Consensus       245 ~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~  324 (392)
                      ..-..=-..+...+..+++..+|.+.|.+.+|+ .+++ +..+||+.+.+|..-...+.+...                 
T Consensus       169 ~v~fRD~~~i~~~v~~~~f~~sPIi~~~~~~p~-~~~~-~~~~NP~~~iie~~R~~~~~~~~~-----------------  229 (263)
T COG1682         169 GVRFRDLGQILGVVLQLLFFLSPIIYPVSNLPE-QLRE-LVLLNPLTHIIESFRAPLLGGDVP-----------------  229 (263)
T ss_pred             hhhcccHHHHHHHHHHHHHHhCceeeehhhccH-HHHH-HHHHCcHHHHHHHHHHHHhCCCcc-----------------
Confidence            544433334445566788889999999999998 4554 999999999999998877655331                 


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          325 MGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       325 ~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                          .+.+....+++.++..++++...++.+
T Consensus       230 ----~~~~~~~~~~~~li~l~vg~~~~~~~~  256 (263)
T COG1682         230 ----DLHLLVYILLLTLILLFVGLLLFRKFR  256 (263)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                223334444555555566666665544

>PF12679 ABC2_membrane_2: ABC-2 family transporter protein

Probab=98.65  E-value=5.8e-06  Score=76.90  Aligned_cols=167  Identities=16%  Similarity=0.241  Sum_probs=93.3

Q ss_pred             HHHHHhcCCC--------CchHHHHHHHHHHHhhHHHH---HHhhhhh---hhhcccCCccchhHHHHHHHHHHHHHH--
Q 016271          169 VFERERLNGH--------YGATAFVFGNTFSALPYLAL---ISLIPGA---IVYDLPGLHKGYQHFTYFVLLLFACML--  232 (392)
Q Consensus       169 ~~~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~---~~~i~~~---i~y~~~g~~~~~~~f~~~~l~~~l~~~--  232 (392)
                      .+-+|+++|.        +++..++++|.++.....++   ...+...   ......|.+.+...+....+......+  
T Consensus        89 ~ia~E~e~gTi~~lls~PisR~~i~~gK~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (277)
T PF12679_consen   89 LIAGERERGTIELLLSKPISRSEILLGKFLAAILFSLLLLIALLVGYLLTLVLIAISGIPIDLSSFLLLLLLFVLLLLAV  168 (277)
T ss_pred             HHHhccccCEeeHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            4556666665        68999999999998877432   2111111   111123445555555544444333333  


Q ss_pred             -HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhccccc-CCCCCCccccc--cccccccHHHHHHHHhHhhhcCCCcCC
Q 016271          233 -LVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFR-LPNDLPHPFWK--YPLYYIAFHKYAYQGMFKNEFEGLKFD  308 (392)
Q Consensus       233 -~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~-~~~~iP~~~w~--~~~~~lsp~~y~~~~l~~~~~~~~~~~  308 (392)
                       +..+++.++|++++|...+...+..+.....+...... ..++.....|.  ..+.+++|..+ ++.......++... 
T Consensus       169 ~~~~sl~~~~S~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~-  246 (277)
T PF12679_consen  169 LVFISLGLLISSLFRSSASAILASLGLLFLLFFLYPIIVFSIANSEALPWVISPNLSFLSPFSP-FNLLIGSILGGGFV-  246 (277)
T ss_pred             HHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHhHHHHcChHHH-HHHHHHHhhccccc-
Confidence             45899999999999888877766655544433322221 11221110021  11466677553 22222222221110 


Q ss_pred             CCCCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016271          309 NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTV  354 (392)
Q Consensus       309 ~~~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~  354 (392)
                                       +...|.++++++++.+++..+++..++++
T Consensus       247 -----------------~~~~~~~~~~~~~~~~v~l~la~~~F~rr  275 (277)
T PF12679_consen  247 -----------------WLSTWPSLLILLAYTLVFLALAYYRFQRR  275 (277)
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                             01378889999999999999998755543

>PRK15176 Vi polysaccharide export inner membrane protein VexB; Provisional

Probab=98.61  E-value=1e-05  Score=74.73  Aligned_cols=233  Identities=14%  Similarity=0.068  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHhhcChh-HHHHHHHHHHHHHHHHHHHhccCCCC-hhhHHHHHHHHHHHHHHHHHHhhc-ccch----
Q 016271           90 TQCIVLTSRSFVNMYRDLG-YYWFRLGVYVLLGVGLATVFSNLGTD-NNSIQARGSLLMFVASFLTFMTIG-GFPS----  162 (392)
Q Consensus        90 ~Q~~~L~~R~~~~~~R~~~-~~~~~~~~~~~~~ll~g~~f~~~~~~-~~~~~~~~g~l~~~~~~~~~~~~~-~~~~----  162 (392)
                      .-++.|.+|+++...|+-. ...-.++.|+++.+++..+|...... ..+.   .+..|..+....+..+. ++..    
T Consensus        19 ~li~~L~~rdlk~ry~~s~LG~~W~~l~Pll~~~v~~~vF~~~~~~~~~~~---~~~~fl~~Gl~pw~~fs~~~~~~~~a   95 (264)
T PRK15176         19 ELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQYLNRSVPIST---DDISFVIAGILPYLLFRYTITATMRT   95 (264)
T ss_pred             HHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4467789999998777654 34456778888878777777543211 0000   01122222222222111 0000    


Q ss_pred             -hHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhc-ccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 016271          163 -FVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYD-LPGLHKGYQHFTYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       163 -~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~-~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                       -..+..-..|    +. ..-...++....++...++..++..++.+. ..+..+.  .........++..+...++|++
T Consensus        96 ~si~~~~~li~----kv-~~p~~i~p~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~l~~~~~~ll~~l~~~glgli  168 (264)
T PRK15176         96 HSFSTSLAVVS----QV-KKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQ--KPFLIFEGMVIAWLLGLSFGYF  168 (264)
T ss_pred             HHHHHHhhcCC----CC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChh--hHHHHHHHHHHHHHHHHHHHHH
Confidence             0001111111    11 222333333334444433333332121121 1233322  2122222223344445566666


Q ss_pred             HHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhh
Q 016271          241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDN  320 (392)
Q Consensus       241 i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~  320 (392)
                      +|.+..-..-..-+...+..+++..+|.+.|.+.+|+ .++ ++.+.||+.+.+|+.-...+++...             
T Consensus       169 ls~l~v~~rDi~~i~~~~l~~lf~~SpI~y~~~~vp~-~~~-~il~~NPl~~~ie~~R~~~~~~~~~-------------  233 (264)
T PRK15176        169 CDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPY-SLL-SIFSWNPLLHANEIVREGMFEGYHS-------------  233 (264)
T ss_pred             HHHHHHhCccHHHHHHHHHHHHHHHhhHhhhHHhCcH-HHH-HHHHHCcHHHHHHHHHHHHhcCcCc-------------
Confidence            6654322211222344556778888999999999998 244 4889999999999998887754211             


Q ss_pred             hccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          321 WQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       321 ~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                              .+.+....+++.++..++++++.|+.+
T Consensus       234 --------~~~~~~~~~~~~~~~l~~G~~~~~~~~  260 (264)
T PRK15176        234 --------LYLEPFYPLAFSATLFLAGLIFHLICD  260 (264)
T ss_pred             --------cccChHHHHHHHHHHHHHHHHHHHHHH
Confidence                    122335666777777777766666543

>PF12698 ABC2_membrane_3: ABC-2 family transporter protein; PDB: 2P0S_B 3CNI_A

Probab=98.41  E-value=4.8e-08  Score=93.04  Aligned_cols=158  Identities=23%  Similarity=0.229  Sum_probs=0.0

Q ss_pred             hhHHHHHH--HHHHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccC---CccchhHHHHHHHHHHHHHHHHHH
Q 016271          162 SFVEDMKV--FERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPG---LHKGYQHFTYFVLLLFACMLLVES  236 (392)
Q Consensus       162 ~~~~er~~--~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g---~~~~~~~f~~~~l~~~l~~~~~~~  236 (392)
                      ...+||+.  ..|-+..|. +...|++++.+..+...+++.++...+   +.|   ++.  .+++..++..++..++..+
T Consensus       181 ~i~~ek~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~i~~~i~~~i---~~~~~~~~~--~~~~~~~l~~~l~~~~~~~  254 (344)
T PF12698_consen  181 SIVEEKESGTRERLLSSGV-SPWSYWLSKFLAYFLVSLIQSLIIIII---IFGISGIPF--GNFLLLLLLLLLFSLAFIS  254 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhHhhhhhhHhhhcccC-CHHHHHHHHHHHHhhHHHHHHHHHHHH---HhccccCcc--cchHHHHHHHHHHHHHHHH
Confidence            33456555  444445665 999999999999999998888776664   344   443  2555566777788888999


Q ss_pred             HHHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHH
Q 016271          237 LMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQV  316 (392)
Q Consensus       237 ~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~  316 (392)
                      ++.+++.++++...+..+..++..++..++|.++|.+++|+  |.+++.++.|..|..+++....+.+ .          
T Consensus       255 ~~~~is~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~P~~~~~~~~~~~~~~~-~----------  321 (344)
T PF12698_consen  255 FGFLISSFFKNSSTAISVASIIILLLSFLSGGFFPLSSLPS--FLQWISSFLPFYWFIQGLRNIIYGD-W----------  321 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhHH--HHHHHHHHhhHHHHHHHHHHHHHhc-H----------
Confidence            99999999999988887777776666677777788888987  5556899999999888875554211 1          


Q ss_pred             HhhhhccccCchhHHHHHHHHHHHHHHHHHHH
Q 016271          317 LRDNWQLQMGYSKWVDLAILFGMVVFYRLVFL  348 (392)
Q Consensus       317 L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~  348 (392)
                                .+.+..+++++++.+++.+++.
T Consensus       322 ----------~~~~~~~~~l~~~~~v~~~l~~  343 (344)
T PF12698_consen  322 ----------SEIWISLIILLLFAVVYLLLAI  343 (344)
T ss_dssp             --------------------------------
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHh
Confidence                      1266777888888888777664

>PF03379 CcmB: CcmB protein; InterPro: IPR003544 Within mitochondria and bacteria, a family of related proteins is involved in the assembly of periplasmic c-type cytochromes: these include CycK [], CcmF [,], NrfE [] and CcbS []

Probab=98.19  E-value=0.00011  Score=65.66  Aligned_cols=157  Identities=18%  Similarity=0.177  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 016271           92 CIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQ-ARGSLLMFVASFLTFMTIGGFPSFVEDMKVF  170 (392)
Q Consensus        92 ~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~er~~~  170 (392)
                      ++.+.||+++.-+|++.....-+...+....++.+.+   +.+.+... ...|++.....+.+..+.        + ..|
T Consensus         1 ~~~l~~kdl~le~r~~~~~~~~~lf~l~~i~if~~al---~~~~~~l~~~~~gllWi~~lfa~~l~~--------~-r~f   68 (215)
T PF03379_consen    1 FLALFRKDLRLEFRSKEGLLSMLLFFLLVIVIFSFAL---GPDPDLLARVAPGLLWIALLFASLLGL--------N-RSF   68 (215)
T ss_pred             CHHHHHHHHHHHHccccchHHHHHHHHHHHHHHHhhc---CCchhHHHHHhHHHHHHHHHHHHHHHh--------h-HhH
Confidence            4679999999999999887766666555555555443   33333323 234555444434333332        2 357


Q ss_pred             HHHhcCCC--------CchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          171 ERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVA  242 (392)
Q Consensus       171 ~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~  242 (392)
                      .+|+++|.        .++..++++|.++......+..++...+...+.|.+.  ..+..+.+.+.+.+.....+|...+
T Consensus        69 ~~E~e~G~L~~l~l~~~~~~~i~l~K~l~~~~~~~~~~~i~~pl~~~l~~~~~--~~~~~~~~~l~lgt~gl~~igtl~a  146 (215)
T PF03379_consen   69 AREYEDGTLEQLLLSPVPRSAIFLGKLLANWLLLFLPELIIFPLFALLFNLPI--SSWPLLLLSLLLGTLGLAAIGTLLA  146 (215)
T ss_pred             HHHHhCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            88888877        3677899999999988777766666666555667653  4555666666777777778888877


Q ss_pred             HhcchhHHHHHHHHHHHHHH
Q 016271          243 SLVPNYLTGIITGAGIQGLM  262 (392)
Q Consensus       243 ~~~~~~~~a~~~~~~~~~~~  262 (392)
                      +++-+......+.+++..|+
T Consensus       147 al~~~~r~~~~Ll~lL~lPl  166 (215)
T PF03379_consen  147 ALAAGARGREILLPLLLLPL  166 (215)
T ss_pred             HHHHhccccCHHHHHHHHHH
Confidence            76655444444444444443

These proteins may play a role in guidance of apocytochromes and haem groups for their covalent linkage by the cytochrome-c-haem lyase. Members of the family are probably integral membrane proteins, with up to 16 predicted transmembrane (TM) helices. The gene products of the hel and ccl loci have been shown to be required specifically for the biogenesis of c-type cytochromes in the Gram-negative photosynthetic bacterium Rhodobacter capsulatus []. Genetic and molecular analyses show that the hel locus contains at least 4 genes, helA, helB, helC and orf52. HelA is similar to the ABC transporters and helA, helB, and helC are proposed to encode an export complex []. It is believed that the hel-encoded proteins are required for the export of haem to the periplasm, where it is subsequently ligated to the c-type apocytochromes []. However, while CcmB and CcmC have the potential to interact with CcmA, the 3 gene products probably associating to form a complex with (CcmA)2-CcmB-CcmC stoichiometry, the substrate for the putative CcmABC-transporter is probably neither haem nor c-type apocytochromes []. Hydropathy analysis suggests the presence of 6 TM domains.; GO: 0015232 heme transporter activity, 0015886 heme transport, 0017004 cytochrome complex assembly, 0016020 membrane

>PF06422 PDR_CDR: CDR ABC transporter; InterPro: IPR010929 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=97.99  E-value=1.4e-05  Score=62.54  Aligned_cols=49  Identities=16%  Similarity=0.410  Sum_probs=43.6

Q ss_pred             CCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 016271          311 LDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPV  360 (392)
Q Consensus       311 ~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~k~~  360 (392)
                      ++|++||+.-+++..+| +|+|++|+++|+++|.++.++++.+.+..+..
T Consensus        31 V~G~~YL~~~y~y~~sh-~WRN~GIli~f~i~f~~~~~~~~e~~~~~~~~   79 (103)
T PF06422_consen   31 VSGDDYLEESYGYSYSH-RWRNFGILIAFWIFFIVLTLLATEFIKFEKSG   79 (103)
T ss_pred             EeHHHHHhhhccccccc-hhhhHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence            68999999768998886 99999999999999999999999988766653

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). In yeast, the PDR and CDR ABC transporters display extensive sequence homology, and confer resistance to several anti-fungal compounds by actively transporting their substrates out of the cell. These transporters have two homologous halves, each with an N-terminal intracellular hydrophilic region that contains an ATP-binding site, followed by a C-terminal membrane-associated region containing six transmembrane segments []. This entry represents a domain of the PDR/CDR ABC transporter comprising extracellular loop 3, transmembrane segment 6 and a linker region.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0016021 integral to membrane

>COG1277 NosY ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]

Probab=97.85  E-value=0.0019  Score=60.19  Aligned_cols=242  Identities=15%  Similarity=0.171  Sum_probs=137.9

Q ss_pred             HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhc---cCCC-----ChhhH--HHHH-HHHHHHHHHHHHHhhc
Q 016271           90 TQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFS---NLGT-----DNNSI--QARG-SLLMFVASFLTFMTIG  158 (392)
Q Consensus        90 ~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~---~~~~-----~~~~~--~~~~-g~l~~~~~~~~~~~~~  158 (392)
                      .++..+.+++++...|+|.............++.....+.   ....     .....  .... ...++...+..+   .
T Consensus         2 ~~~~~i~~~e~~~~~~s~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l   78 (278)
T COG1277           2 SNILVIAQKEFQKYLRSKRFYILLAIFLLFAGIVLLLALKYLLILSKLLEGNPFLLLFLSSVSLVFSFFLPLLAIL---L   78 (278)
T ss_pred             chhhHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcchhhhhhhhHHHHHHHHHHHHHHH---H
Confidence            3577889999999999998877665444445554444442   1111     11111  0000 111111111111   1


Q ss_pred             ccchhHHHHHHHHHHhcCCC--------CchHHHHHHHHHHHhhHHHHHHhhhh--h-hhhcccCCcc---chhHHHHHH
Q 016271          159 GFPSFVEDMKVFERERLNGH--------YGATAFVFGNTFSALPYLALISLIPG--A-IVYDLPGLHK---GYQHFTYFV  224 (392)
Q Consensus       159 ~~~~~~~er~~~~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i~~--~-i~y~~~g~~~---~~~~f~~~~  224 (392)
                      +.       ..+-+|+++|+        .++..-+.+|.+..+...++..++..  . ......|...   +......+.
T Consensus        79 ~~-------~~is~E~~~gTi~~Lls~PisR~~Iv~gK~i~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~  151 (278)
T COG1277          79 GA-------DLISSEFESGTIKLLLSKPISRSNIVLGKFLGALLVILIIILISFISLLTLLLLFGFPGNVSSISRLLLFL  151 (278)
T ss_pred             cc-------chhhccCCcchHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH
Confidence            22       34556666666        68889999999998866666555544  1 2333344433   222455667


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhccccc------CCCCCCccccccccccccHHHHHHHHhH
Q 016271          225 LLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFR------LPNDLPHPFWKYPLYYIAFHKYAYQGMF  298 (392)
Q Consensus       225 l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~------~~~~iP~~~w~~~~~~lsp~~y~~~~l~  298 (392)
                      ...++...+..+++.+++...++...+...+..+.....+..+...      .....|   +...+...+|..+..+...
T Consensus       152 ~~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~  228 (278)
T COG1277         152 GSSLLYGLVLLSISLLISSLFSSSSLALLVSIILLLLFIIAFSLILLFISVLLIGIAP---TLNTLSLLLPLYLLAELAF  228 (278)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh---hhHHHhccCHHHHHHHHhh
Confidence            7777788888899999999999888777766655544433222211      111111   1122677888887777655


Q ss_pred             hhhcCC-CcCCCCCCHHHHHhhhhccc-cCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          299 KNEFEG-LKFDNNLDGEQVLRDNWQLQ-MGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       299 ~~~~~~-~~~~~~~~g~~~L~~~~~~~-~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                      ...... ...    .+       .+.. .....|.++.+++++.+++..++++.+++++
T Consensus       229 ~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~r~d  276 (278)
T COG1277         229 TILLQSGFSD----SI-------LTLNESLLLAWFNILILIIYILIFLSIAYLIFKRRD  276 (278)
T ss_pred             hhcccccccc----cc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            444311 000    00       0011 1113788999999999999999988776554

>TIGR01190 ccmB heme exporter protein CcmB

Probab=97.73  E-value=0.0028  Score=56.18  Aligned_cols=140  Identities=14%  Similarity=0.132  Sum_probs=90.1

Q ss_pred             HHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHH-HHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 016271           95 LTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQAR-GSLLMFVASFLTFMTIGGFPSFVEDMKVFERE  173 (392)
Q Consensus        95 L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~~~~~er~~~~rE  173 (392)
                      +.+|+++.-+|++.....-++..++...++.+-+   +.+.+..+.. .|++.....+....++        | ..|.+|
T Consensus         1 ~~~kDl~l~~r~~~~~~~~llF~l~vi~lf~la~---gp~~~~l~~~apgilWva~lfa~ll~l--------~-rlF~~d   68 (211)
T TIGR01190         1 LIRRDLRLAFRAGGGILNPLWFFLIVVTLFPFGV---GPELKLLSRIAPGIVWVGALLSSLLSL--------D-RLFRDD   68 (211)
T ss_pred             CcHHHHHHHHcccchHHHHHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHHHHHHHHHHHHh--------h-HHHHHH
Confidence            3689999999998877655555444444444333   4444334433 3555444444444332        2 478888


Q ss_pred             hcCCC--------CchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016271          174 RLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLV  245 (392)
Q Consensus       174 ~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~  245 (392)
                      +++|.        .+....+++|.++......+...+..-+.-.+.|++.  .....+.+.+.+.+...+.+|-+.++++
T Consensus        69 ~e~g~Le~lll~p~~~~~i~l~K~la~wl~~~l~~~l~~p~~~~~l~~~~--~~~~~l~l~LllGt~~Ls~igtl~aALt  146 (211)
T TIGR01190        69 FEDGSLDLLMLSPTPLELTVLAKVLAHWLVTGLPLVLLSPLLALLLNLDV--PAWGALALTLLLGTPALSFLGAIGAALT  146 (211)
T ss_pred             HhCCcHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88886        4788899999999987766666655555555666653  3345666677777777888888887776


Q ss_pred             chh
Q 016271          246 PNY  248 (392)
Q Consensus       246 ~~~  248 (392)
                      -+.
T Consensus       147 ~g~  149 (211)
T TIGR01190       147 VGL  149 (211)
T ss_pred             Hhc
Confidence            543

This model describes the cyt c biogenesis protein encoded by ccmB in bacteria. Bacterial c-type cytochromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome C.

>PF12051 DUF3533: Protein of unknown function (DUF3533); InterPro: IPR022703 This transmembrane domain is functionally uncharacterised

Probab=97.52  E-value=0.0035  Score=61.33  Aligned_cols=137  Identities=15%  Similarity=0.108  Sum_probs=92.2

Q ss_pred             chHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCcc--ch--hHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q 016271          180 GATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHK--GY--QHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGIITG  255 (392)
Q Consensus       180 ~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~--~~--~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~  255 (392)
                      +...+++-|.+......++.+++++.+.. ..+.+.  ..  +.|+.+|...++...+.....-.+..+.+.+-.+  +.
T Consensus       240 ~~~~~~~~R~~~~~~~~~~~Sl~~~~v~~-af~~~~~~~~g~~gf~v~Wm~~~l~m~a~g~~~e~~~~~i~~~~~~--~~  316 (382)
T PF12051_consen  240 KPRHYLIYRWIISWIAYFFLSLFYSLVSL-AFQVDFTVAFGKGGFVVYWMFSWLYMSAVGLANENVISIIGPPFMP--FW  316 (382)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH--HH
Confidence            88899999999999999999988888873 444332  33  4588888887776654433333333343333322  22


Q ss_pred             HHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccccCchhHHHHHH
Q 016271          256 AGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDLAI  335 (392)
Q Consensus       256 ~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~~~~~i  335 (392)
                      .+..+.+.+.+ .+.|.+-.|. +++| .+-. |++.+++++....|++..                    ....+++++
T Consensus       317 ll~wvi~nv~~-~~~P~el~p~-fyr~-gya~-P~~n~~~~~r~I~fd~~~--------------------~~lg~n~gi  372 (382)
T PF12051_consen  317 LLFWVILNVSS-TFYPLELSPG-FYRY-GYAM-PMHNIYEGLRVIFFDTCK--------------------GQLGRNYGI  372 (382)
T ss_pred             HHHHHHHhccc-ccCChhhCcc-HHHH-hhhh-hHHHHHHHHHHheeCCCc--------------------ccccchHHH
Confidence            22333444556 4559999998 7775 5555 999999999888765432                    137888899


Q ss_pred             HHHHHHHH
Q 016271          336 LFGMVVFY  343 (392)
Q Consensus       336 L~~~~v~~  343 (392)
                      |+++.++-
T Consensus       373 l~aw~~v~  380 (382)
T PF12051_consen  373 LFAWIVVN  380 (382)
T ss_pred             HHHHHHHH
Confidence            99998763

It is found in bacterial and eukaryotic proteins.

>TIGR03733 lanti_perm_MutG lantibiotic protection ABC transporter permease subunit, MutG family

Probab=97.48  E-value=0.078  Score=48.57  Aligned_cols=76  Identities=13%  Similarity=0.023  Sum_probs=50.2

Q ss_pred             HHhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhh-----cccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016271          172 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVY-----DLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVP  246 (392)
Q Consensus       172 rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y-----~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~  246 (392)
                      |.-.+...++..+++||++......++..++...+..     ...+-+.+...+....+.++++++....+.++++....
T Consensus        78 k~ll~~p~s~~~~~~aK~l~~~~~~~is~~l~~~~~~~g~~~i~~~~~~~~~~~l~~~~~l~~~sl~~~~l~l~ls~~~g  157 (248)
T TIGR03733        78 KNLLSTTKSKYKAYLSKLLLLLLCGFFSTFLAIGIFALGFKYLLKVANLPLSLFLIAALLLIIGSLFLYIIHLFVSFAFG  157 (248)
T ss_pred             HHHhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3333334588999999999887777766554322222     11112334456666777778888889999999998887


Q ss_pred             h
Q 016271          247 N  247 (392)
Q Consensus       247 ~  247 (392)
                      +
T Consensus       158 ~  158 (248)
T TIGR03733       158 M  158 (248)
T ss_pred             C
Confidence            5

Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene modeled separate by TIGR03732, while in some species only one subunit is found.

>COG4587 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=97.41  E-value=0.038  Score=49.39  Aligned_cols=238  Identities=13%  Similarity=0.039  Sum_probs=119.3

Q ss_pred             CHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChh-----hHHHHHHHHHHHHHHHHHHhhcccc
Q 016271           87 DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNN-----SIQARGSLLMFVASFLTFMTIGGFP  161 (392)
Q Consensus        87 s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~-----~~~~~~g~l~~~~~~~~~~~~~~~~  161 (392)
                      ++++..+.+.+-.+..+.--+...+.-.+...+-+++.+.++-.+.++.+     +..+..+.++.+.+....+...++-
T Consensus         3 ~f~rky~~l~~v~~~~~~eYR~~~il~~l~~~l~~~l~~~lW~a~adss~~i~glt~~d~~~Y~~~~fvv~~lt~~~~~~   82 (268)
T COG4587           3 KFWRKYRVLLSVGLASMLEYRVNFILWRLSGLLPLILMGYLWVAVADSSPQINGLTPGDVARYFFATFVVRQLTTVWSIW   82 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46677777777666666555555555555555555555545544433222     1223333333332222222222221


Q ss_pred             hhHHHHHHHHHHhcCCC-----CchHHHHHHHHHHHhhHHHHH---HhhhhhhhhcccCC---c-cchhHHHHHHHHHHH
Q 016271          162 SFVEDMKVFERERLNGH-----YGATAFVFGNTFSALPYLALI---SLIPGAIVYDLPGL---H-KGYQHFTYFVLLLFA  229 (392)
Q Consensus       162 ~~~~er~~~~rE~~~g~-----Y~~~~y~la~~l~~~~~~~~~---~~i~~~i~y~~~g~---~-~~~~~f~~~~l~~~l  229 (392)
                             .|.+|...|.     -++..|.........+..+..   -.+..+..|.+.+-   . .+......+.+.+.+
T Consensus        83 -------ef~~eV~~G~l~~~LLrPld~l~~~~a~~~~~~~~~~lp~~~vL~lifa~l~~~~~~~l~~~~l~~~~l~la~  155 (268)
T COG4587          83 -------EFEKEVREGELSPRLLRPLDYLFHELAAHLGERASRGLPFLLVLLLIFALLYGAILQFLSPWTLYLFVLALAL  155 (268)
T ss_pred             -------HHHHHHHcCeecHHhcCcccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHHhhcCCHHHHHHHHHHHHH
Confidence                   2345555554     244455544444443332222   11112222223221   1 122222222222222


Q ss_pred             HHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCC
Q 016271          230 CMLLVESLMMIVASL-VPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD  308 (392)
Q Consensus       230 ~~~~~~~~g~~i~~~-~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~  308 (392)
                      .......+...+++. +.| +-++.+.........++||.+.|++-.|+  |.+-+--..|+.|.+.-=.......    
T Consensus       156 ~~~~~F~i~f~~~~~aFwt-~~as~l~~~~~~l~~f~sG~l~PL~~fP~--~v~~il~ftPFpy~~y~P~~llvGk----  228 (268)
T COG4587         156 LFLLRFLIQFTFGLFAFWT-ERASSLGKFWWLLYAFLSGSLAPLAFFPD--WVRAILAFTPFPYLLYTPVMLLVGK----  228 (268)
T ss_pred             HHHHHHHHHHHHHHHHhhc-cchhhHHHHHHHHHHHhccccchHHhChH--HHHHHHHhCCchhhhccHHHHHhcc----
Confidence            222223333444433 344 44666677666778889999999999998  7665666788888765432222111    


Q ss_pred             CCCCHHHHHhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016271          309 NNLDGEQVLRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKT  353 (392)
Q Consensus       309 ~~~~g~~~L~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~  353 (392)
                                    .+.+ ..+.+.++.+++.+++.++.-...|+
T Consensus       229 --------------~s~~-~il~al~v~~~Wl~im~~l~~~lWrr  258 (268)
T COG4587         229 --------------YSGA-QILKALLVQIGWLLIMWLLSRWLWRR  258 (268)
T ss_pred             --------------ccHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                          1112 37888889999988888877654443

>COG1511 Predicted membrane protein [Function unknown]

Probab=97.01  E-value=0.0099  Score=63.47  Aligned_cols=160  Identities=18%  Similarity=0.182  Sum_probs=110.2

Q ss_pred             hcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 016271          174 RLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMIVASLVPNYLTGII  253 (392)
Q Consensus       174 ~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~  253 (392)
                      ...+.+....|++++.+..+.....+..+....-+++.|++.  ..-+++++..+.+++++..+-..+..++.+...  .
T Consensus       610 ~~~~~~~~~~~~~~~~~~~i~~~~~q~~i~~~~~~~~l~~~~--~~~~~~~~~~i~~s~~f~~ii~~lv~~~g~~g~--~  685 (780)
T COG1511         610 LSDGILNGRVYFFGKNLVFITLGLIQSLIVTLGLVLLLGVEV--KSPLLLVLFAIFSSVAFMIIIYLLVSLFGNPGK--F  685 (780)
T ss_pred             ccccccchHHHHHHhhhHHHHHHHHHHHHHHhcCeEEEEecc--CchhHHHHHHHHHHHHHHHHHHHHHHHhCcchH--H
Confidence            566678888999999999999999999888888877777763  334455555566777766666666666665543  3


Q ss_pred             HHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccccCchhHHHH
Q 016271          254 TGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQMGYSKWVDL  333 (392)
Q Consensus       254 ~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~~~~  333 (392)
                      +..++.+.+...+|-..|.+..|. +++. ++..-|++|++.++-.....                    ......|...
T Consensus       686 i~ivllvlq~~~~~G~~pi~~~~~-~~~~-l~~~lp~ty~v~~~r~~~~~--------------------~~~~~~~~~~  743 (780)
T COG1511         686 IAIVLLVLQIAGSGGTFPIQLSPS-FFQI-LHPALPLTYAVNGFREVIGG--------------------PIPSNLWSGL  743 (780)
T ss_pred             HHHHHHHHHHhccccccchhccHH-HHHH-HHHhccHHHHHHHhHHhhcc--------------------CchHHHhhhH
Confidence            445556667777888889999998 6665 99999999996665433211                    1111378888


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhhccc
Q 016271          334 AILFGMVVFYRL-VFLGIVKTVEKMKP  359 (392)
Q Consensus       334 ~iL~~~~v~~~~-la~~~l~~~~~~k~  359 (392)
                      +++.++.++|++ +.++.+....+.+.
T Consensus       744 ~~~~~~~i~~~~~~~~~~~~~~~~~~~  770 (780)
T COG1511         744 LALIGFLILFIIGGLFLKLPLDKKLKK  770 (780)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            888888877777 44444444444333

>COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones]

Probab=96.97  E-value=0.042  Score=47.80  Aligned_cols=146  Identities=14%  Similarity=0.166  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHH-HHHHHHHHHHHHHHHhhcccchhHHHHH
Q 016271           90 TQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQA-RGSLLMFVASFLTFMTIGGFPSFVEDMK  168 (392)
Q Consensus        90 ~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~er~  168 (392)
                      ..+..+.+|++|.-+|.+.....-+........++..   .++++.+-... .-|++.....+.+..+.        || 
T Consensus         2 ~~~~~l~~rdLrl~~R~~~~~~~~l~F~l~Vi~lfp~---~vGpd~~~la~iaPgilWia~lLA~lL~l--------~r-   69 (221)
T COG2386           2 MAFLALFKRDLRLEFRAKAGILNPLLFFLLVITLFPL---AVGPDPQLLARIAPGILWIAALLASLLGL--------ER-   69 (221)
T ss_pred             hhHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcc---ccCCchhHHHHhcchHHHHHHHHHHHHhH--------HH-
Confidence            4567899999999999998766555544444444433   33444333222 23555554444443332        44 


Q ss_pred             HHHHHhcCCCC--------chHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 016271          169 VFERERLNGHY--------GATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       169 ~~~rE~~~g~Y--------~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                      .|++|+++|.-        ....-+++|+++....+.+.-++.+-..+.+.|.+  .+.+....+.+++.+...+.+|-.
T Consensus        70 lF~~d~edGsLE~l~l~p~pl~~~vl~Kv~ahw~~t~lplvl~sPl~~lll~~~--~~~~~~~~ltLllGtp~ls~~ga~  147 (221)
T COG2386          70 LFRDDYEDGSLEQLMLSPLPLAAVVLGKVLAHWLLTGLPLVLASPLLALLLNMD--VGALGALALTLLLGTPALSFLGAV  147 (221)
T ss_pred             HHHHhhhcCcHHHHHcCCCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCC--HhHHHHHHHHHHhcchHHHHHHHH
Confidence            78999999872        45566889999988777777666666667677765  355665666666666665556655


Q ss_pred             HHHhcchhH
Q 016271          241 VASLVPNYL  249 (392)
Q Consensus       241 i~~~~~~~~  249 (392)
                      .++++-+..
T Consensus       148 gaALtv~lr  156 (221)
T COG2386         148 GAALTVGLR  156 (221)
T ss_pred             HHHHHhcCc
Confidence            555544333

>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=96.83  E-value=0.0022  Score=45.23  Aligned_cols=45  Identities=22%  Similarity=0.482  Sum_probs=38.2

Q ss_pred             CCHHHHHhhhhcccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016271          311 LDGEQVLRDNWQLQM-GYSKWVDLAILFGMVVFYRLVFLGIVKTVEK  356 (392)
Q Consensus       311 ~~g~~~L~~~~~~~~-~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~  356 (392)
                      +-|.++|++ .|+.. ++++|..+++|++++++|.++..++|.+.+.
T Consensus        11 tlG~~vL~~-rG~~~~~~WyWIgvgaL~G~~vlFNil~~laL~yL~p   56 (65)
T PF08370_consen   11 TLGVAVLKS-RGLFTESYWYWIGVGALLGFIVLFNILFTLALTYLNP   56 (65)
T ss_pred             cHHHHHHHH-cCCCCCCcEEeehHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            468999999 55544 4568999999999999999999999999864

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].

>PF06182 ABC2_membrane_6: ABC-2 family transporter protein; InterPro: IPR010390 This family consists of a number of hypothetical bacterial proteins of unknown function

Probab=95.91  E-value=1.2  Score=40.03  Aligned_cols=125  Identities=13%  Similarity=0.078  Sum_probs=72.8

Q ss_pred             HHHHhcCCC--------CchHHHHHHHHHHH-hhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 016271          170 FERERLNGH--------YGATAFVFGNTFSA-LPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       170 ~~rE~~~g~--------Y~~~~y~la~~l~~-~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                      +.++.++|.        ++...+.+.+-+.. ....++.+++.........+.+.+..++..+.+.+.+..+...++..+
T Consensus        54 i~~~I~~G~ld~~LlrPv~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~i~~~~~~~~~~~~~l~~g~li~~~i~~~  133 (229)
T PF06182_consen   54 ISEDIRTGELDQYLLRPVNYLFYLLFRNLGPSSLGFLIVGIILLIYALIQLGIPWSPLNILLFILSLLLGFLINFSIFFI  133 (229)
T ss_pred             HhhhhcCCceeeehhcCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445555555        45656666555543 223333333333333334567777778887777777777777777777


Q ss_pred             HHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhH
Q 016271          241 VASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMF  298 (392)
Q Consensus       241 i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~  298 (392)
                      ++.++=-......+.   .....+++|...|.+-.|+ ..+..+.++.|+.+....=.
T Consensus       134 ~~~laFw~~~~~~~~---~i~~~l~sg~~~Pl~~fp~-~~~~il~~~lPf~~i~~~P~  187 (229)
T PF06182_consen  134 IGLLAFWFTESWGLS---YIFYSLLSGAIYPLSIFPG-WIQFILTFILPFAYISYVPA  187 (229)
T ss_pred             HHHHHHHHhcchHHH---HHHHHHHHHHHccHHHhHH-HHHHHHHHHhhHHHHHHHHH
Confidence            776543222222222   2334458999999999998 33333555588887765533

>PF12730 ABC2_membrane_4: ABC-2 family transporter protein

Probab=95.80  E-value=0.94  Score=39.68  Aligned_cols=84  Identities=26%  Similarity=0.378  Sum_probs=47.4

Q ss_pred             HHHHHhcCCC--------CchHHHHHHHHHHHhhHHHHHHhhhhhhhh---cccCC-ccchhH----HHHHHHHHHHHHH
Q 016271          169 VFERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVY---DLPGL-HKGYQH----FTYFVLLLFACML  232 (392)
Q Consensus       169 ~~~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y---~~~g~-~~~~~~----f~~~~l~~~l~~~  232 (392)
                      .+.+|+++|+        .++..++.+|.++.....++..++...+.+   .+.+. ..+...    ...+.+..++...
T Consensus        69 ~~~~e~~~~~~~~~~~~~~~r~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (232)
T PF12730_consen   69 LFSREYKNGTIKLLLSRPISRKKIFLAKFIVILIIILLLFLISFLISLLIGLLFGFSGFDYSSLLQYLISYLLLFLLLSL  148 (232)
T ss_pred             HHHHHHhcChhhHhhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHHHHHHHHHHHHHHHH
Confidence            4445555554        489999999999998776666555333322   22232 222222    2233334444444


Q ss_pred             HHHHHHHHHHHhcchhHHHHH
Q 016271          233 LVESLMMIVASLVPNYLTGII  253 (392)
Q Consensus       233 ~~~~~g~~i~~~~~~~~~a~~  253 (392)
                      ....+ .+++...+|...+..
T Consensus       149 ~~~~~-~~i~~~~~~~~~~i~  168 (232)
T PF12730_consen  149 FISLL-LFISSLFRNSIVAII  168 (232)
T ss_pred             HHHHH-HHHHHHHhhHHHHHH
Confidence            44455 777888887655543

>TIGR01257 rim_protein retinal-specific rim ABC transporter

Probab=95.75  E-value=0.54  Score=55.36  Aligned_cols=136  Identities=10%  Similarity=0.090  Sum_probs=85.6

Q ss_pred             cccchhHHHHHHHHHHhcC--CCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhcccCCccchhHHHHHHHHHHHHHHHHH
Q 016271          158 GGFPSFVEDMKVFERERLN--GHYGATAFVFGNTFSALPYLALISLIPGAIVYDLPGLHKGYQHFTYFVLLLFACMLLVE  235 (392)
Q Consensus       158 ~~~~~~~~er~~~~rE~~~--g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      ..+.....||+.=.||...  |+ +.+.|++|..+..+...++.+++.+++...  +--....+++..++++++.++...
T Consensus       669 ~lv~~iV~EKE~rlKE~MkiMGL-~~~~~w~sWfi~~~~~~~i~~~l~~~il~~--~~~~~~s~~~~lfl~~~~y~~s~I  745 (2272)
T TIGR01257       669 MTVKSIVLEKELRLKETLKNQGV-SNAVIWCTWFLDSFSIMSMSIFLLTIFIMH--GRILHYSDPFILFLFLLAFSTATI  745 (2272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CceeecCChHHHHHHHHHHHHHHH
Confidence            4456677788888888544  55 889999999999887777766554444321  111122344555556667777888


Q ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHHHHhccc-ccCCCCCCccccccccccccHHHHHHHHh
Q 016271          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGF-FRLPNDLPHPFWKYPLYYIAFHKYAYQGM  297 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~-~~~~~~iP~~~w~~~~~~lsp~~y~~~~l  297 (392)
                      .++.+++.++.+...|..++.++...+.+--.+ +.-.+.++.. ..+.++-++|.-+++..-
T Consensus       746 ~~~fliS~fFska~~A~~~~~li~f~~~lp~~~~~~~~~~~~~~-~~~~~sL~sp~af~~g~~  807 (2272)
T TIGR01257       746 MQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTAD-LKTAVSLLSPVAFGFGTE  807 (2272)
T ss_pred             HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcccccCHH-HHHHHHhcCHHHHHHHHH
Confidence            999999999999998888888776554432211 1123344431 222266677866665443

This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.

>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]

Probab=94.86  E-value=2.5  Score=41.14  Aligned_cols=211  Identities=16%  Similarity=0.123  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCC---hhhHHHH------HHHH---HHHHHHHHHH----h---hcccchhHHHHHH
Q 016271          109 YYWFRLGVYVLLGVGLATVFSNLGTD---NNSIQAR------GSLL---MFVASFLTFM----T---IGGFPSFVEDMKV  169 (392)
Q Consensus       109 ~~~~~~~~~~~~~ll~g~~f~~~~~~---~~~~~~~------~g~l---~~~~~~~~~~----~---~~~~~~~~~er~~  169 (392)
                      .++.-.+-..+.++++|.+|.++++.   ...+.+.      .|.+   |+...+...+    +   +..+.....||+.
T Consensus       299 ~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlkl~geEr~n  378 (536)
T COG3559         299 SLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLKLHGEERGN  378 (536)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcc
Confidence            34455566678889999999877542   1111111      0111   2221111111    1   1122233455555


Q ss_pred             HHHHhcCCCCchHHHHHHHHHHHhhHHHHHHh---hhhhhhhcccCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016271          170 FERERLNGHYGATAFVFGNTFSALPYLALISL---IPGAIVYDLPGL--HKGYQHFTYFVLLLFACMLLVESLMMIVASL  244 (392)
Q Consensus       170 ~~rE~~~g~Y~~~~y~la~~l~~~~~~~~~~~---i~~~i~y~~~g~--~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~  244 (392)
                      -...-.++-.|++..+.+.+...+....+..+   ......|.+.+-  ..+....+.--++.+.-.+...++...+.-+
T Consensus       379 r~eal~a~~vsR~~vl~syl~~all~~~l~tllAl~ga~L~~~~~~~~v~~s~~~~v~sgl~~lvav~f~l~ia~ll~GL  458 (536)
T COG3559         379 RAEALLAGAVSRTHVLASYLAMALLGSALATLLALVGAGLAYGMTVGDVGGSLPTVVGSGLVQLVAVWFLLAIAVLLFGL  458 (536)
T ss_pred             hHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCccHHHHHHHhHHHHHHHHHHHHHHHHHhcc
Confidence            44444444457666666666555443333322   222233333221  1111122222222222333444555555566


Q ss_pred             cchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcCCCCCCHHHHHhhhhccc
Q 016271          245 VPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDNWQLQ  324 (392)
Q Consensus       245 ~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~y~~~~l~~~~~~~~~~~~~~~g~~~L~~~~~~~  324 (392)
                      .|........--.+......++|    .-++|+  |   +-.+||+.|--.                         .+.+
T Consensus       459 aPr~t~laWlyl~~~~fvtyLg~----Llslpe--w---l~nlSp~~hip~-------------------------lpve  504 (536)
T COG3559         459 APRFTPLAWLYLIVGFFVTYLGG----LLSLPE--W---LLNLSPFAHIPR-------------------------LPVE  504 (536)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHH----hcccHH--H---HhcCCccccCcc-------------------------CCcc
Confidence            67655444333333334445565    446776  5   677888654210                         0011


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016271          325 MGYSKWVDLAILFGMVVFYRLVFLGIVKTVE  355 (392)
Q Consensus       325 ~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                       |.+.| .++.+.++.+....+++.+.|+|+
T Consensus       505 -d~n~~-pll~l~ii~vaL~~lGf~~yrRRd  533 (536)
T COG3559         505 -DFNAV-PLLWLLIIDVALITLGFMAYRRRD  533 (536)
T ss_pred             -ccchH-HHHHHHHHHHHHHHhhHHHHhhhc
Confidence             11233 345566667777777777766554

>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family

Probab=94.84  E-value=2.8  Score=38.12  Aligned_cols=67  Identities=12%  Similarity=0.008  Sum_probs=39.4

Q ss_pred             CchHHHHHHHHHHHhhHHHHHHhhhhhhhhc---ccCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016271          179 YGATAFVFGNTFSALPYLALISLIPGAIVYD---LPGLH-KGYQHFTYFVLLLFACMLLVESLMMIVASLV  245 (392)
Q Consensus       179 Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~---~~g~~-~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~  245 (392)
                      .+....++||++......++..++..+..+.   +.|.. .+...+....+..++.++....+.+.++...
T Consensus        80 vs~~~~~~aK~l~~~~~~~~s~~i~~i~~~~~g~l~~~~~~~~~~~~~~~l~~~i~sl~~i~l~l~ls~~~  150 (241)
T TIGR03732        80 VDLKKVWIAKILVIAIYLLISCIILFIGLVLIGFVIPPSNISIGQALLASLLIWLTSLWQIPLCLFLARKF  150 (241)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4788999999999877766666554433221   22311 2233444455556666666666666666444

Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.

>TIGR01257 rim_protein retinal-specific rim ABC transporter

Probab=92.76  E-value=1.2  Score=52.59  Aligned_cols=94  Identities=13%  Similarity=0.088  Sum_probs=68.5

Q ss_pred             chhHHHHHHHHH--HhcCCCCchHHHHHHHHHHHhhHHHHHHhhhhhhhhccc--CCccchhHHHHHHHHHHHHHHHHHH
Q 016271          161 PSFVEDMKVFER--ERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYDLP--GLHKGYQHFTYFVLLLFACMLLVES  236 (392)
Q Consensus       161 ~~~~~er~~~~r--E~~~g~Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~~--g~~~~~~~f~~~~l~~~l~~~~~~~  236 (392)
                      .....||..=.|  ..-+|. +..+|+++..+.++...++..+++.++++..-  ++. +...+...++++++.+++...
T Consensus      1699 ~~~V~ER~skaK~lQ~vSGv-~~~~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~-~~~~l~~~~lll~lyG~a~ip 1776 (2272)
T TIGR01257      1699 LYLIQERVNKAKHLQFISGV-SPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYT-SPENLPALVALLMLYGWAVIP 1776 (2272)
T ss_pred             eeeehHHhhhHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhc-CcchHHHHHHHHHHHHHHHHH
Confidence            344567766443  456787 99999999999999888888777666655332  222 334555566777888999999


Q ss_pred             HHHHHHHhcchhHHHHHHHH
Q 016271          237 LMMIVASLVPNYLTGIITGA  256 (392)
Q Consensus       237 ~g~~i~~~~~~~~~a~~~~~  256 (392)
                      +.++++.++++...|.....
T Consensus      1777 ~tYl~SflF~~~~~A~~~~~ 1796 (2272)
T TIGR01257      1777 MMYPASFLFDVPSTAYVALS 1796 (2272)
T ss_pred             HHHHHHHhhCCchhHHHHHH
Confidence            99999999999988865544

This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.

>COG4200 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.54  E-value=12  Score=33.38  Aligned_cols=110  Identities=16%  Similarity=0.206  Sum_probs=66.2

Q ss_pred             HHHhcCCC--------CchHHHHHHHHHHHhhHHHHHHhhhhhhhhcc---cCCccchh--HHHHHHHHHHHHHHHHHHH
Q 016271          171 ERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVYDL---PGLHKGYQ--HFTYFVLLLFACMLLVESL  237 (392)
Q Consensus       171 ~rE~~~g~--------Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~~---~g~~~~~~--~f~~~~l~~~l~~~~~~~~  237 (392)
                      .-|+.+|.        +++.-.|++|+..-+....+.+++....++..   .|...+..  .++.-...-++.+.-...+
T Consensus        76 ~~Ehk~n~W~~ll~lPv~r~~~YlsK~~~vf~L~~l~~li~~~~i~~~gv~~g~~~s~~~~~~~~~~~~gll~alpl~~l  155 (239)
T COG4200          76 SVEHKSNMWKHLLLLPVARWKVYLSKVFWVFILVALTSLILFISIWTVGVLYGGVKSFELAAAFTLLILGLLLALPLVAL  155 (239)
T ss_pred             HHHhcCCCchhhheeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            44555555        67888899999988877776655544444322   23332222  2333333344455555567


Q ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHH
Q 016271          238 MMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHK  291 (392)
Q Consensus       238 g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~~~~lsp~~  291 (392)
                      =...+..++|...+..++... .+.+..     .-++.|.  |   +.|-.|..
T Consensus       156 Q~wLsm~fknf~~al~igI~l-~a~fva-----~~~s~~~--~---~PW~~pi~  198 (239)
T COG4200         156 QFWLSMRFKNFAVALVIGIFL-PALFVA-----SAESLPV--W---LPWASPIL  198 (239)
T ss_pred             HHHHHHHHHhhhHhHHHHHhH-HHHHHH-----hccccCc--c---ccchhhhh
Confidence            777788889988888777665 222222     3455776  5   66667755

>COG1668 NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]

Probab=87.77  E-value=14  Score=36.59  Aligned_cols=78  Identities=18%  Similarity=0.081  Sum_probs=51.3

Q ss_pred             CchHHHHHHHHHHHhhHHHHHHhhhhhhhhc---------ccC--CccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhcc
Q 016271          179 YGATAFVFGNTFSALPYLALISLIPGAIVYD---------LPG--LHKGYQHFTYFVLLLFACM-LLVESLMMIVASLVP  246 (392)
Q Consensus       179 Y~~~~y~la~~l~~~~~~~~~~~i~~~i~y~---------~~g--~~~~~~~f~~~~l~~~l~~-~~~~~~g~~i~~~~~  246 (392)
                      -|+..++.+|++.-....+++..+..+..++         ..+  +...+..+..+.+++.+.+ +...+++.+++..+.
T Consensus       227 vSr~~ii~gKil~~~~v~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~l~a~l~~~a~  306 (407)
T COG1668         227 VSRSEIVFGKILGAALVGLTQIALWLLALTIATFLSLAVALAGTGLALLPAYLLLFALSLFLLGLLLYAALAAFLGAMAG  306 (407)
T ss_pred             cChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5999999999999999999887666666521         111  1222333434444444333 445558888899999


Q ss_pred             hhHHHHHHHH
Q 016271          247 NYLTGIITGA  256 (392)
Q Consensus       247 ~~~~a~~~~~  256 (392)
                      +.+.++....
T Consensus       307 ~~k~aq~~~~  316 (407)
T COG1668         307 SIKEAQTLIS  316 (407)
T ss_pred             CHHHHHHHhh
Confidence            8888776665

>PF09847 DUF2074: Predicted permease (DUF2074); InterPro: IPR018646 This family has no known function

Probab=87.02  E-value=22  Score=35.66  Aligned_cols=107  Identities=7%  Similarity=0.036  Sum_probs=62.4

Q ss_pred             cCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHhhcccch
Q 016271           83 STHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATVFSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPS  162 (392)
Q Consensus        83 ~~~~s~~~Q~~~L~~R~~~~~~R~~~~~~~~~~~~~~~~ll~g~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~  162 (392)
                      +++.+...-...+++.+++...|++..+. -++.|+++++..-......++...      ...+........+++.+...
T Consensus       241 ~~~~k~~~~~~al~~KDlK~~~R~sq~l~-~~L~Pl~~~i~~i~~~~~~~~~~~------~~~~~i~~~~~~ss~~~~~~  313 (449)
T PF09847_consen  241 KFKIKIRSPLLALFKKDLKILFRKSQLLF-GFLYPLVFVIPFIFMILSSGDPLS------LTIFYIIIIGVYSSMMSDAL  313 (449)
T ss_pred             eeccccCcchHHHHHHHHHHHHcchhHHH-HHHHHHHHHHHHHHHHhhcCchhH------HHHHHHHHHHHHHHHHHHHH
Confidence            34455566678899999999999988765 577777777664322222222111      11222222223333343344


Q ss_pred             hHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhHHH
Q 016271          163 FVEDMKVFERERLNGHYGATAFVFGNTFSALPYLA  197 (392)
Q Consensus       163 ~~~er~~~~rE~~~g~Y~~~~y~la~~l~~~~~~~  197 (392)
                      ...|++.+.--+.-.. +...+..+|.+.......
T Consensus       314 l~~E~~~~~~l~sLPi-~~~~~v~sKil~~~~i~~  347 (449)
T PF09847_consen  314 LKIEGEGFEFLRSLPI-KKREFVRSKILIPSIIPS  347 (449)
T ss_pred             HHHhhhcchhHhhCCC-ChHHHHHHHHHHHHHHHH
Confidence            4456666544444444 888999999998764443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	392
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 66/441 (14%), Positives = 133/441 (30%), Gaps = 123/441 (27%)

Query: 14  LQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAID-----ILTKSYKSSDSYLQVRSQVA 68
           LQ      L  I+ ++    +      +            + +K Y++    L V   V 
Sbjct: 202 LQK----LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC---LLVLLNV- 253

Query: 69  EICKAQDSGALEKKSTHADFLTQC-IVLTSRSFVNMYRDLGYYWFRLGVYVLLGVGLATV 127
                Q++ A         F   C I+LT+R                 V   L     T 
Sbjct: 254 -----QNAKAWNA------FNLSCKILLTTRF--------------KQVTDFLSAATTTH 288

Query: 128 FSNLGTDNNSIQARGSLLMFVASFLTFMTIGGFPSFVEDMKVFE--RERLNGH------Y 179
            S L   + ++       +    +L             D +  +  RE L  +       
Sbjct: 289 IS-LDHHSMTLTPDEVKSLL-LKYL-------------DCRPQDLPREVLTTNPRRLSII 333

Query: 180 GATAFVFGNTFSALPYL---ALISLIPGAIVYDLPGLHKG-YQHFTYF---------VLL 226
             +      T+    ++    L ++I  ++    P  ++  +   + F         +L 
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 227 LFACMLLVESLMMIVASLV---------PNYLTGI--------ITGAGIQGL--MILGGG 267
           L    ++   +M++V  L                I        +       L   I+   
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-- 451

Query: 268 FFRLP-----NDLPHPFW-KYPLYYIAFH-KYAYQG----MFKNEFEGLKFDNNLDGEQV 316
            + +P     +DL  P+  +Y   +I  H K         +F+  F   +F   L  EQ 
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF---L--EQK 506

Query: 317 LRDNWQLQMGYSKWVDLAILFGMVVFYRLVFLGIVKTVEKMKPVVKAFMSVPMKRTTQIM 376
           +R +          ++       + FY+     I     K + +V A +    K    ++
Sbjct: 507 IRHDSTAWNASGSILN---TLQQLKFYKPY---ICDNDPKYERLVNAILDFLPKIEENLI 560

Query: 377 ENPYTTPPQ-----EDKILYK 392
            + YT   +     ED+ +++
Sbjct: 561 CSKYTDLLRIALMAEDEAIFE 581

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00