Citrus Sinensis ID: 016275

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
Protein Sequence
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENPCATPPQEDKIFYQ
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHcccccccccccHHHHHHHcccccHccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccccHHHHHHHHHcHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mqffalngfpcpalqnpsdhFLKTINKDFQKDIEEglagvipteEAIDILTKSYKSSDNYLQLRSQVAEICKAqdsgalekksahADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFsnlgtdnnsiQARGSLLMFVASYLTFMtiggfpsfVEDMKVFERErlnghygaTAFVFGNTFSALPYLALISLIPGAIvyylpglhegyQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLmilgggffrlpndlphpfwkyplyYIAFHKYAYQGMFknefeglkfdnnldgeqVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAfmsvpmkqttqimenpcatppqedkifyq
Flexible Loop (DISEMBL)
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTtqimenpcatppqedkifyq
Low Complexity Region (SEG)
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENPCATPPQEDKIFYQ
Disordered region (IsUnstruct)
**FFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQD*GALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSV*************************
Disordered Region (DISOPRED)
MQFFALNGFPCPALQNPSDHFLKTINK******************AIDILTKSYKSSDN****************************FLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK**********************************
Disordered Region (DISEMBL)
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENPCATPPQEDKIFYQ
Disordered Region (DISPRO)
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDS**LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPM***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENPCATPPQEDKIFYQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	392	2.2.26 [Sep-21-2011]
Q8RXN0	703	ABC transporter G family	yes	no	0.969	0.540	0.471	7e-96
Q8RWI9	691	ABC transporter G family	no	no	0.948	0.538	0.402	2e-83
Q9C8J8	678	ABC transporter G family	no	no	0.918	0.530	0.382	8e-79
Q9C8K2	687	ABC transporter G family	no	no	0.933	0.532	0.405	6e-77
Q9ZUU9	730	ABC transporter G family	no	no	0.877	0.471	0.321	2e-54
Q3E9B8	624	ABC transporter G family	no	no	0.698	0.439	0.261	7e-27
Q9MAH4	590	ABC transporter G family	no	no	0.686	0.455	0.25	7e-24
Q9SW08	577	ABC transporter G family	no	no	0.709	0.481	0.288	1e-23
Q9FLX5	589	ABC transporter G family	no	no	0.780	0.519	0.262	2e-23
Q9SIT6	649	ABC transporter G family	no	no	0.760	0.459	0.253	1e-22

>sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1

 Score =  351 bits (900), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 189/401 (47%), Positives = 266/401 (66%), Gaps = 21/401 (5%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGV--------------IPTEEAI 47
           +FFA  GFPCPAL+NPSDHFL+ IN DF K +   L G               I T EAI
Sbjct: 282 EFFAQAGFPCPALRNPSDHFLRCINSDFDK-VRATLKGSMKLRFEASDDPLEKITTAEAI 340

Query: 48  DILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDL 107
            +L   Y +SD Y   +++V EI + + +  L+   + A FL Q   LT RSF+NM RD 
Sbjct: 341 RLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDF 399

Query: 108 GYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDM 167
           GYYW RL +Y+L+ + + T++ N+GT  ++I ARGS   FV  ++TFM+IGGFPSFVEDM
Sbjct: 400 GYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDM 459

Query: 168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLL 227
           KVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y++ GLH G+ H+++FVL L
Sbjct: 460 KVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCL 519

Query: 228 FACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYI 287
           +A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI
Sbjct: 520 YASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYI 579

Query: 288 AFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVF 342
           +FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ 
Sbjct: 580 SFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIII 639

Query: 343 YRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENPCATP 383
           YR++F  +IKT E + P V+ +++    +     +N    P
Sbjct: 640 YRIIFFIMIKTNEDVTPWVRGYIARRRMKQKNGTQNTTVAP 680

Required for the cuticle and pollen coat development by controlling cutin and maybe wax transport to the extracellular matrix. Involved in developmental plasticity and stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RWI9|AB15G_ARATH ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2

 Score =  309 bits (792), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 160/398 (40%), Positives = 244/398 (61%), Gaps = 26/398 (6%)

Query: 1   MQFFALNGFPCPALQNPSDHFLKTINKDF---------QKDIEEGLAGVIP-----TEEA 46
           ++FFA +GFPCP  +NPSDHFL+ IN DF          + I+E  A   P     T   
Sbjct: 257 VEFFAESGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIQETPATSDPLMNLATSVI 316

Query: 47  IDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRD 106
              L ++YK S      +S++ E+   +      +K + A +  Q   LT+RSF+NM RD
Sbjct: 317 KARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCRD 376

Query: 107 LGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVED 166
           +GYYW R+  Y+++ I + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E+
Sbjct: 377 VGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLEE 436

Query: 167 MKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLL 226
           MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y L     G+ H+ +F L 
Sbjct: 437 MKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLN 496

Query: 227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYY 286
           +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ Y
Sbjct: 497 IFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSY 556

Query: 287 IAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMV 340
           I++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++
Sbjct: 557 ISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAIL 616

Query: 341 VFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMEN 378
           V YRL+F  ++K  E+  P +KA       Q  + M N
Sbjct: 617 VCYRLLFFVVLKLRERAGPALKAI------QAKRTMRN 648

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8J8|AB13G_ARATH ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1

 Score =  294 bits (752), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 149/390 (38%), Positives = 225/390 (57%), Gaps = 30/390 (7%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDF---------QKDIEEGLAGV------------ 40
           +FF   GFPCP+ +NPSDHFL+ +N DF          + I +    +            
Sbjct: 243 KFFGEAGFPCPSRRNPSDHFLRCVNSDFDNVTAALVESRRINDSSFSLHQLHETTNTLDP 302

Query: 41  ---IPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTS 97
              IPT E    L + +K S      R+++ EI          KK +  ++  Q  +LT 
Sbjct: 303 LDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILTQ 362

Query: 98  RSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTI 157
           RSF+NM RDLGYYW R+ VY++L I + ++F N+G ++ ++ +  +   F+A ++TFM+I
Sbjct: 363 RSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMSI 422

Query: 158 GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGY 217
           GGF SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I  Y+     G 
Sbjct: 423 GGFQSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGG 482

Query: 218 QHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPH 277
            HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP 
Sbjct: 483 SHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPM 542

Query: 278 PFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWV 331
            FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+
Sbjct: 543 VFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWL 602

Query: 332 DLAILFGMVVFYRLVFLGIIKTVEKMKPVV 361
           DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct: 603 DLAVVMMILIGYRIAFFAILKFREKVFPVI 632

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8K2|AB12G_ARATH ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1

 Score =  288 bits (736), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 157/387 (40%), Positives = 242/387 (62%), Gaps = 21/387 (5%)

Query: 1   MQFFALNGFPCPALQNPSDHFLKTINKDF---------QKDIEEGLAGVIP-----TEEA 46
           ++FFA  GFPCP  +NPSDHFL+ IN DF          + I E  A   P     T E 
Sbjct: 257 VEFFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEI 316

Query: 47  IDILTKSYKSSDNYLQLRSQVAEICKAQDSGALE-KKSAHADFLTQCIVLTSRSFVNMYR 105
              L ++Y+ S      +S++ E+   +    +E +K + A +  Q   LT RSFVNM R
Sbjct: 317 KARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCR 376

Query: 106 DLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVE 165
           D+GYYW R+ +Y+++   + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E
Sbjct: 377 DIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIE 436

Query: 166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVL 225
           +MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y +     G  H+ +F L
Sbjct: 437 EMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCL 496

Query: 226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
            +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ 
Sbjct: 497 NIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPIS 556

Query: 286 YIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGM 339
           ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  +
Sbjct: 557 FMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLI 616

Query: 340 VVFYRLVFLGIIKTVEKMKPVVKAFMS 366
           +V YR++F  ++K  E+ +P +KA  +
Sbjct: 617 LVCYRILFFIVLKLKERAEPALKAIQA 643

Involved in the secretion of cuticular wax from epidermal cells to the cuticle.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUU9|AB3G_ARATH ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=2

 Score =  213 bits (542), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 17/361 (4%)

Query: 1   MQFFALNGFPCPALQNPSDHFLKTINKDF----------QKDIEEGLAGVIPTEEAIDIL 50
           +Q F+  GFPCP +Q+PSDHFL+ IN DF          Q D  +  A  + T  AI  L
Sbjct: 344 LQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTL 403

Query: 51  TKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYY 110
             +YKSS +   + + + ++ + +  G   K    A   T+  VLT RS + M R+  YY
Sbjct: 404 EATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYY 461

Query: 111 WFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVF 170
           W RL +Y++L + + T++S LG   +S+  R + +    S+ + + I G PS ++++K++
Sbjct: 462 WLRLILYMILTLSIGTLYSGLGHSLSSVATRVAAVFVFVSFASLLGIAGIPSLLKEIKIY 521

Query: 171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFAC 230
             E  N H GA  F+ G    ++P+L L+S+    + Y++ GL + +   +YFVL  F C
Sbjct: 522 RSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMC 581

Query: 231 MLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFH 290
           +L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH
Sbjct: 582 LLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFH 641

Query: 291 KYAYQGMFKNEFEGLKFD----NNLDGEQVLRDKWQLQMGY-SKWVDLAILFGMVVFYRL 345
            Y+ +G+ +NE+ G  F      ++ G Q ++  +Q+     +KW ++ +L  M   YRL
Sbjct: 642 TYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRL 701

Query: 346 V 346
           +
Sbjct: 702 L 702

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E9B8|AB23G_ARATH ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1

 Score =  122 bits (305), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 151/287 (52%), Gaps = 13/287 (4%)

Query: 74  QDSGALEKKSAHADF-LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLG 132
           ++ G + KK A     +T+   L SR    +YR    +  R    V+ G+GL +V++ L 
Sbjct: 333 ENDGIISKKEAFRVLDVTEISYLCSRFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLK 392

Query: 133 TDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSA 192
            D   +  R  L  F  S+L   T+   P ++ + +V  +E   G Y  ++++  NT + 
Sbjct: 393 RDEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAF 452

Query: 193 LPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGI 252
           +P+L ++SL+    VY++ GL+   Q F +FVL ++  +L+  SL++ ++++ P++++G 
Sbjct: 453 VPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGN 512

Query: 253 ITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDN 309
                + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +
Sbjct: 513 SLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSS 570

Query: 310 N-----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGII 351
                 + GE VL+++   +   ++W+++ I+    VFYR++  GI+
Sbjct: 571 GNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MAH4|AB10G_ARATH ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1

 Score =  112 bits (279), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 139/284 (48%), Gaps = 15/284 (5%)

Query: 65  SQVAEICKAQDSGALEKKSAHAD-FLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIG 123
           S+  + C     G L +  +H++  L +  +L  RS  N++R    +  R     + G+ 
Sbjct: 306 SKTWKSCYISAGGELHQSDSHSNSVLEEVQILGQRSCKNIFRTKQLFTTRALQASIAGLI 365

Query: 124 LATVFSNLGTDNNSIQA-RGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGAT 182
           L +++ N+G      +  R     F+ ++L   T  G P F++D ++  RE     Y   
Sbjct: 366 LGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVL 425

Query: 183 AFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVA 242
           ++V  +T   +P+L +IS++    VY+L GL      F+YF L+++  +L+  S +   +
Sbjct: 426 SYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFS 485

Query: 243 SLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF 302
           +LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+
Sbjct: 486 ALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEY 543

Query: 303 EGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLV 346
            G  F    D ++             KW +L I+   +V YR++
Sbjct: 544 RGDVFLKQQDLKE-----------SQKWSNLGIMASFIVGYRVL 576

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SW08|AB4G_ARATH ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1

 Score =  111 bits (277), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 20/298 (6%)

Query: 74  QDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGT 133
           Q    +  KS+    +T+  +L+SR +  +YR        +   +++G+ L T++ N+GT
Sbjct: 286 QKQSIVRYKSSR---ITEISLLSSRFWKIIYRTRQLLLTNILESLVVGLVLGTIYLNIGT 342

Query: 134 DNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSAL 193
               I+ R  L  F  ++L   T    P F+++  +  RE  +G Y  ++ +  NT   L
Sbjct: 343 GKEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFL 402

Query: 194 PYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGII 253
           PYL LI++I    +Y+L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  
Sbjct: 403 PYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTS 462

Query: 254 TGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE-----------F 302
           +   +     L  G+F     LP  +W + +Y+ + +KYA   +  NE           F
Sbjct: 463 SVTILLAAFFLFSGYFISKESLPK-YWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWF 520

Query: 303 EGLKFDNNL-DGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIIKTVEKMK 358
           E    ++ L  G  VL DK  L     +W ++ +L G  V YR L FL ++K V   K
Sbjct: 521 EEASVNSCLVTGGDVL-DKNGLH-ERQRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLX5|AB8G_ARATH ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 25/331 (7%)

Query: 44  EEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSA---HADFLTQCIVLTSRSF 100
           E A++IL +  +S  N     +    +   ++    EK+S        +T+  +L  R +
Sbjct: 267 EYAMEILQELRESDGN-----TDATALPSIENRKQREKQSIVRYRKSRITEISLLARRFW 321

Query: 101 VNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGF 160
             +YR            +++G+ L T++ N+G     I+ R  +  F  ++L   T    
Sbjct: 322 KIIYRTRQLLLTNALEALVVGLVLGTIYINIGIGKAGIEKRFGMFAFTLTFLLSSTTETL 381

Query: 161 PSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHF 220
           P F+ +  +  RE  +G Y  ++ +  NT   LPYL +IS+I    VY+L GL   +Q F
Sbjct: 382 PIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAF 441

Query: 221 IYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFW 280
            YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W
Sbjct: 442 GYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPK-YW 500

Query: 281 KYPLYYIAFHKYAYQGMFKNEFEGLKFD------------NNLDGEQVLRDKWQLQMGYS 328
            + +Y+ + +KYA   +  NE+  L                 + G  VL+ K   +    
Sbjct: 501 LF-MYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEK--Q 557

Query: 329 KWVDLAILFGMVVFYR-LVFLGIIKTVEKMK 358
           +W ++ +L G  V YR L FL +++ V   K
Sbjct: 558 RWFNVYVLLGFFVLYRVLCFLALLRRVSGSK 588

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIT6|AB5G_ARATH ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 155/308 (50%), Gaps = 10/308 (3%)

Query: 51  TKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYY 110
           +KS K +   L  +++VA++     +    +  A++  L + ++LT R   N++R    +
Sbjct: 333 SKSGKFTLQQLFQQTRVADVGTMNIATEFTRDFANSR-LEETMILTHRFSKNIFRTKELF 391

Query: 111 WFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVF 170
             R    +  GI L  +F NL  D    + R  L  F+ ++L   TI   P F+++ ++ 
Sbjct: 392 ACRTVQMLGSGIVLGLIFHNLKDDLKGARERVGLFAFILTFLLTSTIEALPIFLQEREIL 451

Query: 171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFAC 230
            +E  +G Y  +++   N    LP+L +++++    VY+L GL+  +  F++F LL++  
Sbjct: 452 MKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLI 511

Query: 231 MLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFH 290
           +    S+++  ++LVPN++ G    +G+ G   L  G+F   +++P  +W + ++YI+  
Sbjct: 512 LYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPG-YWIF-MHYISLF 569

Query: 291 KYAYQGMFKNEFEGLK------FDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYR 344
           KY ++G   NEF          F   L  E+ L  K +     S+W ++ I+   V+ YR
Sbjct: 570 KYPFEGFLINEFSKSNKCLEYGFGKCLVTEEDLL-KEERYGEESRWRNVVIMLCFVLLYR 628

Query: 345 LVFLGIIK 352
            +   I++
Sbjct: 629 FISYVILR 636

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
255569746	701	ATP-binding cassette transporter, putati	0.971	0.543	0.704	1e-164
224060415	622	white-brown-complex ABC transporter fami	0.928	0.585	0.713	1e-161
147782239	691	hypothetical protein VITISV_012972 [Viti	0.969	0.549	0.689	1e-159
225462868	676	PREDICTED: ABC transporter G family memb	0.969	0.562	0.683	1e-158
359475745	798	PREDICTED: ABC transporter G family memb	0.977	0.479	0.656	1e-155
359497424	698	PREDICTED: ABC transporter G family memb	0.961	0.540	0.659	1e-155
296088208	891	unnamed protein product [Vitis vinifera]	0.961	0.423	0.659	1e-155
359497157	565	PREDICTED: ABC transporter G family memb	0.959	0.665	0.659	1e-154
225462866	653	PREDICTED: ABC transporter G family memb	0.969	0.581	0.665	1e-154
147856245	857	hypothetical protein VITISV_020569 [Viti	0.961	0.439	0.657	1e-154

>gi|255569746|ref|XP_002525837.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223534842|gb|EEF36531.1| ATP-binding cassette transporter, putative [Ricinus communis]

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 274/389 (70%), Positives = 316/389 (81%), Gaps = 8/389 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FFALNGFPCP LQNPSDHFLKTINKDF+KD+E GL      EEAI  L KSYKSS NY 
Sbjct: 307 EFFALNGFPCPTLQNPSDHFLKTINKDFEKDLERGLGYGTTAEEAIATLVKSYKSSHNYQ 366

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q+R  VAEICK QDSGAL+K+   A F+TQ ++LT RS VNM+RDLGYYW RL +YV L 
Sbjct: 367 QVRRHVAEICK-QDSGALQKERTRASFITQSLILTRRSSVNMFRDLGYYWLRLAIYVALA 425

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           +GLATVF NLG+   SI+ RGSLLMF+AS+LTFM IGGFPSFVEDMK+F+RERLNGHYG 
Sbjct: 426 VGLATVFGNLGSSYASIKDRGSLLMFIASFLTFMAIGGFPSFVEDMKIFQRERLNGHYGT 485

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GNTFSA+P+L LISL+PGAI Y+LPGLH G +HF+YF+  LFACM+LVESLMM V
Sbjct: 486 AAFVLGNTFSAIPFLLLISLVPGAITYFLPGLHGGAEHFLYFICSLFACMMLVESLMMTV 545

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQ LMIL GGFFRLP DLP PFWKYP++YIAFH+YAYQGMFKNE
Sbjct: 546 ASIVPNFLMGIITGAGIQSLMILAGGFFRLPRDLPAPFWKYPMHYIAFHRYAYQGMFKNE 605

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           FEGL F NN       + GE++LR+ WQ+ + YSKWVDLAIL GMVV YRL+FLGII   
Sbjct: 606 FEGLTFPNNQIGGPSEVSGEEILRNIWQVDLSYSKWVDLAILLGMVVVYRLLFLGIISIK 665

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENPCATP 383
           EK+KP++ A +S   KQTTQIMENP  TP
Sbjct: 666 EKVKPMITALISASPKQTTQIMENPVTTP 694

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060415|ref|XP_002300188.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222847446|gb|EEE84993.1| white-brown-complex ABC transporter family [Populus trichocarpa]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 277/388 (71%), Positives = 319/388 (82%), Gaps = 24/388 (6%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQK---------------DIEEGLAGVIPTEEA 46
           +FFALNGFPCP LQNPSDHFLKTINKDF+                D E+GL   I  E A
Sbjct: 236 EFFALNGFPCPTLQNPSDHFLKTINKDFETVCFLIQCLALRYLWLDPEQGLEDAITAEVA 295

Query: 47  IDILTKSYKSSDNYLQLRSQVAEICK-AQDSGALEKKSAHADFLTQCIVLTSRSFVNMYR 105
           I+ LTK+YKSSD+Y +++  V EI +  QD G LE++S H+ FLTQC+VLT RSFVNMYR
Sbjct: 296 INTLTKAYKSSDHYQKVKRLVTEIFRWIQDCGTLEERS-HSSFLTQCLVLTRRSFVNMYR 354

Query: 106 DLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVE 165
           DLGYYW R+ +YV L +GLAT+F NLG+DN+SIQ RGSLLMF+AS+LTFMTIGGFPSFVE
Sbjct: 355 DLGYYWLRVAIYVALALGLATLFYNLGSDNDSIQDRGSLLMFIASFLTFMTIGGFPSFVE 414

Query: 166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVL 225
           DMKVFERERLNGHYGATAFV GNTFSA PYL LIS+IPGAI YYLPGLH+GY+HFIYFVL
Sbjct: 415 DMKVFERERLNGHYGATAFVLGNTFSAFPYLLLISVIPGAITYYLPGLHKGYEHFIYFVL 474

Query: 226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
           +LFACM+LVESLMM VAS+VPN+L GIITGAGIQ  MILGGGFFRLPNDLP PFWKYP+Y
Sbjct: 475 VLFACMMLVESLMMTVASMVPNFLMGIITGAGIQAFMILGGGFFRLPNDLPQPFWKYPMY 534

Query: 286 YIAFHKYAYQGMFKNEFEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFG 338
           YIAFHKYAYQGMFKNEFEGL F +N       + GEQ+LRD+WQ++MG SKWVDLAIL G
Sbjct: 535 YIAFHKYAYQGMFKNEFEGLTFPSNQTGGPRTIPGEQILRDRWQVEMGVSKWVDLAILLG 594

Query: 339 MVVFYRLVFLGIIKTVEKMKPVVKAFMS 366
           MVV YR++FL IIKT EK+KP++ A +S
Sbjct: 595 MVVLYRILFLVIIKTSEKIKPIIAAIVS 622

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782239|emb|CAN60999.1| hypothetical protein VITISV_012972 [Vitis vinifera]

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/387 (68%), Positives = 322/387 (83%), Gaps = 7/387 (1%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FF+ NGFPCP  QNPSDHFLKTINKDF++DIE+G  G    EEAIDILTK+YKSSDN+ 
Sbjct: 297 EFFSSNGFPCPTHQNPSDHFLKTINKDFEEDIEQGFGGKKSKEEAIDILTKAYKSSDNFQ 356

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q+++QV+EI K QD GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL +YV L 
Sbjct: 357 QVQTQVSEIYK-QDGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAIYVALT 414

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + L T+F N+G  N+SI+ RGS+LM+VAS+LTFM+IGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 415 VALGTIFHNVGYSNSSIKDRGSMLMYVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGS 474

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
           ++FV GNT S++PYL +ISLIPGAI Y+L GL + Y HFIY+ L+LF CM+LVESLMMIV
Sbjct: 475 SSFVVGNTLSSVPYLLVISLIPGAIAYFLTGLQKEYAHFIYYALVLFTCMMLVESLMMIV 534

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL+ILGGGFFRLPNDLP+ FW+YPLYYI+F++YAYQG++KNE
Sbjct: 535 ASVVPNFLMGIITGAGIQGLLILGGGFFRLPNDLPNVFWRYPLYYISFNRYAYQGLYKNE 594

Query: 302 FEGLKFDNN-----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEK 356
           F GL F +N     + GE+VLR+ WQ++M YSKWVDL+IL GMVV YR +F   IKT EK
Sbjct: 595 FLGLTFPSNIAGRVITGEEVLRETWQMEMAYSKWVDLSILIGMVVLYRFLFFIFIKTTEK 654

Query: 357 MKPVVKAFMSVPMKQTTQIMENPCATP 383
           + P VKAFMS P KQT Q+M NP ATP
Sbjct: 655 VIPTVKAFMSRPPKQTKQVMANPFATP 681

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462868|ref|XP_002270647.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/389 (68%), Positives = 322/389 (82%), Gaps = 9/389 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FF+ NGFPCP  QNPSDHFLKTINKDF++DIE+G  G    EEAIDILTK+YKSSDN+ 
Sbjct: 280 EFFSSNGFPCPTHQNPSDHFLKTINKDFEEDIEQGFGGKKSKEEAIDILTKAYKSSDNFQ 339

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q+++QV+EI K QD GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL +YV L 
Sbjct: 340 QVQTQVSEIYK-QDGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAIYVALT 397

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + L T+F N+G  N+SI+ RGS+LM+VAS+LTFM+IGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 398 VALGTIFHNVGYSNSSIKDRGSMLMYVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGS 457

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
           ++F+ GNT S++PYL +ISLIPGAI Y+L GL + Y HFIY+ L+LF CM+LVESLMMIV
Sbjct: 458 SSFLVGNTLSSVPYLLVISLIPGAIAYFLTGLQKEYAHFIYYALVLFTCMMLVESLMMIV 517

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL+ILGGGFFRLPNDLP+ FW+YPLYYI+F++YAYQG++KNE
Sbjct: 518 ASVVPNFLMGIITGAGIQGLLILGGGFFRLPNDLPNVFWRYPLYYISFNRYAYQGLYKNE 577

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           F GL F +N       + GE+VLR+ WQ++M YSKWVDL+IL GMVV YR +F   IKT 
Sbjct: 578 FLGLTFPSNIAGGPRVITGEEVLRETWQMEMAYSKWVDLSILIGMVVLYRFLFFIFIKTT 637

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENPCATP 383
           EK+ P VKAFMS P KQT Q+M NP ATP
Sbjct: 638 EKVIPTVKAFMSRPPKQTKQVMANPFATP 666

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475745|ref|XP_002270397.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 256/390 (65%), Positives = 315/390 (80%), Gaps = 7/390 (1%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           + F+ NGFPCP LQNPSDHFLKTINKDF++DIE+GL G  P EE IDIL K+YKSS +  
Sbjct: 289 ELFSRNGFPCPTLQNPSDHFLKTINKDFEEDIEQGLGGKKPKEEVIDILIKAYKSSGSCQ 348

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q+++QV EICK +   AL+K   HA F+ QC++LT RS+VNM RDLGYYW RLGVY+++ 
Sbjct: 349 QVQAQVTEICKQEGDQALQKSRDHAGFVNQCLILTKRSYVNMSRDLGYYWMRLGVYIMVS 408

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
             L T+F +LG  N+SIQ RGS+LMFVAS+LTFM+IGGFPSFVEDMKVF RERLNGHYG 
Sbjct: 409 FALGTIFYDLGFSNSSIQDRGSMLMFVASFLTFMSIGGFPSFVEDMKVFGRERLNGHYGT 468

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GNT S++P+L LISLIPGAI YYL GL +G ++FIY+ L+LFACM+LVES+MMIV
Sbjct: 469 GAFVVGNTLSSVPFLLLISLIPGAIAYYLAGLQKGCEYFIYYALVLFACMMLVESIMMIV 528

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           ASLVPN+L GIITGAGIQGL+IL GGFFRLP++LP+  W+YPLYY++F++YAYQGM+KNE
Sbjct: 529 ASLVPNFLVGIITGAGIQGLLILSGGFFRLPDNLPNILWRYPLYYVSFNRYAYQGMYKNE 588

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           F GL F  +       + GE++LR +WQ++MGYSKWVDLAIL GM+  YRL+FL IIKT 
Sbjct: 589 FTGLTFPGDQSGGPATISGEEILRKRWQVEMGYSKWVDLAILVGMIALYRLLFLIIIKTT 648

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENPCATPP 384
           EK+ P++KAFMS P K T Q+M N   TPP
Sbjct: 649 EKVMPLIKAFMSRPPKHTNQVMSNSTPTPP 678

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497424|ref|XP_002267117.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 254/385 (65%), Positives = 319/385 (82%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIEEGL G   TEEAI+IL ++YKSS+   
Sbjct: 309 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 368

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q++ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 369 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 427

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA++LTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 428 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 487

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI YYL  L +G++HF+YF +LLF CM+LVESLMM+V
Sbjct: 488 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 547

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 548 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 607

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+FLGIIKTV
Sbjct: 608 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFLGIIKTV 667

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENP 379
           EK+KP+++   +VP +++ QI+E+P
Sbjct: 668 EKVKPMIRGLFAVPPEKSKQILEDP 692

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088208|emb|CBI35723.3| unnamed protein product [Vitis vinifera]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 254/385 (65%), Positives = 319/385 (82%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIEEGL G   TEEAI+IL ++YKSS+   
Sbjct: 502 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 561

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q++ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 562 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 620

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA++LTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 621 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 680

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI YYL  L +G++HF+YF +LLF CM+LVESLMM+V
Sbjct: 681 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 740

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 741 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 800

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+FLGIIKTV
Sbjct: 801 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFLGIIKTV 860

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENP 379
           EK+KP+++   +VP +++ QI+E+P
Sbjct: 861 EKVKPMIRGLFAVPPEKSKQILEDP 885

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497157|ref|XP_003635439.1| PREDICTED: ABC transporter G family member 11-like, partial [Vitis vinifera]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 254/385 (65%), Positives = 317/385 (82%), Gaps = 9/385 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIEEGL G   TEEAI+IL ++YKSS+   
Sbjct: 177 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 236

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q++ +V+EIC  Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 237 QVQGRVSEIC--QQKGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 294

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA++LTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 295 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 354

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI YYL  L +G++HF+YF +LLF CM+LVESLMM+V
Sbjct: 355 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 414

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 415 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 474

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+F+GIIKTV
Sbjct: 475 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFMGIIKTV 534

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENP 379
           EK+KP+++    VP +++ QI+ENP
Sbjct: 535 EKVKPMIRGLFVVPPEKSKQIVENP 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462866|ref|XP_002270573.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/389 (66%), Positives = 320/389 (82%), Gaps = 9/389 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FF+ NGFPCP  QNPSDHFLKTINKDF++DIE+G  G    EEAIDILTK+YKSS N+ 
Sbjct: 257 EFFSSNGFPCPTHQNPSDHFLKTINKDFEQDIEQGFGGKKSKEEAIDILTKAYKSSGNFQ 316

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q++SQVA+I K ++ GAL+K+S HA FL QC+VLT RSFVNMYRDLGYYW RL VY+ L 
Sbjct: 317 QVQSQVAKIHK-KEGGALKKRS-HASFLNQCLVLTRRSFVNMYRDLGYYWLRLAVYIALT 374

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           I L T+F N+G  N+SI+ RG++LM+VAS+LTFMTIGGFPSFVEDMKVF RERLNGHYG+
Sbjct: 375 IALGTIFYNVGHSNSSIKDRGAMLMYVASFLTFMTIGGFPSFVEDMKVFGRERLNGHYGS 434

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
           +AFV GNT S++PYL +ISLIPGAI YYL GL +G +H IY+ L+LF CM+LVE LMMIV
Sbjct: 435 SAFVVGNTLSSIPYLLVISLIPGAIAYYLTGLQKGCEHSIYYALVLFTCMILVEGLMMIV 494

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VPN+L GIITGAGIQGL++L GGFFRLP+D P PFW+YPLYY++F+KYAYQG++KNE
Sbjct: 495 ASIVPNFLMGIITGAGIQGLLMLSGGFFRLPDDFPKPFWRYPLYYLSFNKYAYQGLYKNE 554

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           F+GLKF N+       + GE++LR +WQ++M YSKW+DLAIL GM V YRL+FL  IKT 
Sbjct: 555 FQGLKFPNDEAGGPPIISGEEILRKRWQVEMVYSKWIDLAILLGMAVLYRLLFLITIKTT 614

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENPCATP 383
           EK+ P+VKA +S P K++ Q+M N  ATP
Sbjct: 615 EKVIPLVKALVSRPSKRSKQVMANLSATP 643

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856245|emb|CAN81791.1| hypothetical protein VITISV_020569 [Vitis vinifera]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 253/385 (65%), Positives = 316/385 (82%), Gaps = 8/385 (2%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           +FFA NGFPCP+L+NPSDH+L+TINKDF  DIEEGL G   TEEAI+IL ++YKSS+   
Sbjct: 468 EFFAKNGFPCPSLRNPSDHYLRTINKDFDLDIEEGLGGATSTEEAINILVRAYKSSETCQ 527

Query: 62  QLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 121
           Q++ +V+EIC+ Q  G LEKK + A F TQC+VLT RSFVNMYRDLGYYW RL +Y+ L 
Sbjct: 528 QVQGRVSEICQ-QKGGVLEKKGSQASFATQCLVLTKRSFVNMYRDLGYYWLRLAIYIALC 586

Query: 122 IGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGA 181
           + + T+F ++G    SIQARGS+LMFVA++LTFM IGGFPSFVEDMK+F RERLNGHYG 
Sbjct: 587 LCVGTIFYDIGFSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGV 646

Query: 182 TAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV 241
            AFV GN+ S++PYL +ISLIPGAI YYL  L +G++HF+YF +LLF CM+LVESLMM+V
Sbjct: 647 GAFVIGNSLSSIPYLLMISLIPGAIAYYLVHLQKGFEHFVYFAILLFVCMMLVESLMMMV 706

Query: 242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE 301
           AS+VP++L GIITGAGIQG+M+L GGFFRLPNDLP+PFWKYP+YYIAFHKYA QG +KNE
Sbjct: 707 ASIVPDFLMGIITGAGIQGVMMLCGGFFRLPNDLPNPFWKYPMYYIAFHKYANQGFYKNE 766

Query: 302 FEGLKFDNN-------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV 354
           FEGL F NN       + GE++L++ WQ++MGYSKW+DLAILFGMVV YRL+F GIIKTV
Sbjct: 767 FEGLTFPNNQVGGAPTITGEEILQNVWQVEMGYSKWIDLAILFGMVVLYRLMFXGIIKTV 826

Query: 355 EKMKPVVKAFMSVPMKQTTQIMENP 379
           EK+KP+++    VP +++ QI EBP
Sbjct: 827 EKVKPMIRGLFXVPPEKSKQIXEBP 851

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
TAIR|locus:2030898	703	ABCG11 "ATP-binding cassette G	0.938	0.523	0.487	1.7e-98
TAIR|locus:2033899	687	ABCG12 "ATP-binding cassette G	0.933	0.532	0.405	2.4e-76
TAIR|locus:2092960	691	ABCG15 "ATP-binding cassette G	0.933	0.529	0.406	2.4e-76
TAIR|locus:2033939	678	ABCG13 "ATP-binding cassette G	0.859	0.497	0.391	2.5e-75
TAIR|locus:2046203	730	ABCG3 "ATP-binding cassette G3	0.892	0.479	0.316	4.4e-52
CGD|CAL0002254	579	orf19.3120 [Candida albicans (	0.790	0.535	0.268	2.3e-33
UNIPROTKB|Q5A0X6	579	CaO19.10632 "Putative uncharac	0.790	0.535	0.268	2.3e-33
TAIR|locus:2150290	624	ABCG23 "ATP-binding cassette G	0.772	0.485	0.263	4.2e-29
TAIR|locus:2117507	577	ABCG4 "ATP-binding cassette G4	0.785	0.533	0.284	4.9e-27
TAIR|locus:2009640	590	ABCG10 "ATP-binding cassette G	0.686	0.455	0.253	1.4e-25

TAIR|locus:2030898 ABCG11 "ATP-binding cassette G11" [Arabidopsis thaliana (taxid:3702)]

 Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
 Identities = 190/390 (48%), Positives = 265/390 (67%)

Query:     2 QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGV--------------IPTEEAI 47
             +FFA  GFPCPAL+NPSDHFL+ IN DF K +   L G               I T EAI
Sbjct:   282 EFFAQAGFPCPALRNPSDHFLRCINSDFDK-VRATLKGSMKLRFEASDDPLEKITTAEAI 340

Query:    48 DILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDL 107
              +L   Y +SD Y   +++V EI + + +  L+   + A FL Q   LT RSF+NM RD 
Sbjct:   341 RLLVDYYHTSDYYYTAKAKVEEISQFKGT-ILDSGGSQASFLLQTYTLTKRSFINMSRDF 399

Query:   108 GYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDM 167
             GYYW RL +Y+L+ + + T++ N+GT  ++I ARGS   FV  ++TFM+IGGFPSFVEDM
Sbjct:   400 GYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDM 459

Query:   168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLL 227
             KVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y++ GLH G+ H+++FVL L
Sbjct:   460 KVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCL 519

Query:   228 FACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYI 287
             +A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI
Sbjct:   520 YASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYI 579

Query:   288 AFHKYAYQGMFKNEFEGLKFDNN-----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVF 342
             +FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ 
Sbjct:   580 SFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIII 639

Query:   343 YRLVFLGIIKTVEKMKPVVKAFMSVP-MKQ 371
             YR++F  +IKT E + P V+ +++   MKQ
Sbjct:   640 YRIIFFIMIKTNEDVTPWVRGYIARRRMKQ 669

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=IDA

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0015245 "fatty acid transporter activity" evidence=TAS

GO:0015908 "fatty acid transport" evidence=TAS

GO:0080051 "cutin transport" evidence=IMP

TAIR|locus:2033899 ABCG12 "ATP-binding cassette G12" [Arabidopsis thaliana (taxid:3702)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 157/387 (40%), Positives = 242/387 (62%)

Query:     1 MQFFALNGFPCPALQNPSDHFLKTINKDFQ---------KDIEEGLAGVIP-----TEEA 46
             ++FFA  GFPCP  +NPSDHFL+ IN DF          + I E  A   P     T E 
Sbjct:   257 VEFFAEAGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIRETPATSDPLMNLATSEI 316

Query:    47 IDILTKSYKSSDNYLQLRSQVAEICKAQDSGALE-KKSAHADFLTQCIVLTSRSFVNMYR 105
                L ++Y+ S      +S++ E+   +    +E +K + A +  Q   LT RSFVNM R
Sbjct:   317 KARLVENYRRSVYAKSAKSRIRELASIEGHHGMEVRKGSEATWFKQLRTLTKRSFVNMCR 376

Query:   106 DLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVE 165
             D+GYYW R+ +Y+++   + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E
Sbjct:   377 DIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIE 436

Query:   166 DMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVL 225
             +MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y +     G  H+ +F L
Sbjct:   437 EMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCL 496

Query:   226 LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
              +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ 
Sbjct:   497 NIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPIS 556

Query:   286 YIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWVDLAILFGM 339
             ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  +
Sbjct:   557 FMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLI 616

Query:   340 VVFYRLVFLGIIKTVEKMKPVVKAFMS 366
             +V YR++F  ++K  E+ +P +KA  +
Sbjct:   617 LVCYRILFFIVLKLKERAEPALKAIQA 643

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0009651 "response to salt stress" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

TAIR|locus:2092960 ABCG15 "ATP-binding cassette G15" [Arabidopsis thaliana (taxid:3702)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 157/386 (40%), Positives = 242/386 (62%)

Query:     1 MQFFALNGFPCPALQNPSDHFLKTINKDFQ---------KDIEEGLAGVIPTEE-AIDI- 49
             ++FFA +GFPCP  +NPSDHFL+ IN DF          + I+E  A   P    A  + 
Sbjct:   257 VEFFAESGFPCPKKRNPSDHFLRCINSDFDTVTATLKGSQRIQETPATSDPLMNLATSVI 316

Query:    50 ---LTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRD 106
                L ++YK S      +S++ E+   +      +K + A +  Q   LT+RSF+NM RD
Sbjct:   317 KARLVENYKRSKYAKSAKSRIRELSNIEGLEMEIRKGSEATWWKQLRTLTARSFINMCRD 376

Query:   107 LGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVED 166
             +GYYW R+  Y+++ I + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E+
Sbjct:   377 VGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLEE 436

Query:   167 MKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLL 226
             MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y L     G+ H+ +F L 
Sbjct:   437 MKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLN 496

Query:   227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYY 286
             +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ Y
Sbjct:   497 IFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSY 556

Query:   287 IAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWVDLAILFGMV 340
             I++  +A QG +KN+F GL+F+        + GE+V+   + +++ YSKW DLA +  ++
Sbjct:   557 ISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAIL 616

Query:   341 VFYRLVFLGIIKTVEKMKPVVKAFMS 366
             V YRL+F  ++K  E+  P +KA  +
Sbjct:   617 VCYRLLFFVVLKLRERAGPALKAIQA 642

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2033939 ABCG13 "ATP-binding cassette G13" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
 Identities = 135/345 (39%), Positives = 205/345 (59%)

Query:    41 IPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSF 100
             IPT E    L + +K S      R+++ EI          KK +  ++  Q  +LT RSF
Sbjct:   306 IPTAEIRTTLVRKFKCSLYAAASRARIQEIASIVGIVTERKKGSQTNWWKQLRILTQRSF 365

Query:   101 VNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGF 160
             +NM RDLGYYW R+ VY++L I + ++F N+G ++ ++ +  +   F+A ++TFM+IGGF
Sbjct:   366 INMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMSIGGF 425

Query:   161 PSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHF 220
              SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I  Y+     G  HF
Sbjct:   426 QSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHF 485

Query:   221 IYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFW 280
              Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW
Sbjct:   486 FYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFW 545

Query:   281 KYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLD------GEQVLRDKWQLQMGYSKWVDLA 334
             +YP+ YI +  +A QG +KNE  G+++D+ L       GE +L+    +    SKW+DLA
Sbjct:   546 RYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLA 605

Query:   335 ILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIMENP 379
             ++  +++ YR+ F  I+K  EK+ PV+   M    +  + I + P
Sbjct:   606 VVMMILIGYRIAFFAILKFREKVFPVIH--MLYTKRTLSHIQKRP 648

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0009651 "response to salt stress" evidence=IDA

GO:0080051 "cutin transport" evidence=IMP

GO:0080172 "petal epidermis patterning" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2046203 ABCG3 "ATP-binding cassette G3" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 116/367 (31%), Positives = 200/367 (54%)

Query:     1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDI--------EEG-LAGV-IPTEEAIDIL 50
             +Q F+  GFPCP +Q+PSDHFL+ IN DF + I        + G  + V + T  AI  L
Sbjct:   344 LQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSAVNMDTAVAIRTL 403

Query:    51 TKSYKSSDNYLQLRSQVAEICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYY 110
               +YKSS +   + + + ++ + +  G   K    A   T+  VLT RS + M R+  YY
Sbjct:   404 EATYKSSADADSVEAMIIKLTERE--GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYY 461

Query:   111 WFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVF 170
             W RL +Y++L + + T++S LG   +S+  R + +    S+ + + I G PS ++++K++
Sbjct:   462 WLRLILYMILTLSIGTLYSGLGHSLSSVATRVAAVFVFVSFASLLGIAGIPSLLKEIKIY 521

Query:   171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFAC 230
               E  N H GA  F+ G    ++P+L L+S+    + Y++ GL + +   +YFVL  F C
Sbjct:   522 RSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMC 581

Query:   231 MLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFH 290
             +L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH
Sbjct:   582 LLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFH 641

Query:   291 KYAYQGMFKNEFEGLKFD----NNLDGEQVLRDKWQLQMGYS-KWVDLAILFGMVVFYRL 345
              Y+ +G+ +NE+ G  F      ++ G Q ++  +Q+    + KW ++ +L  M   YRL
Sbjct:   642 TYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRL 701

Query:   346 VFLGIIK 352
             +   +++
Sbjct:   702 LVYVLLR 708

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

CGD|CAL0002254 orf19.3120 [Candida albicans (taxid:5476)]

 Score = 367 (134.2 bits), Expect = 2.3e-33, P = 2.3e-33
 Identities = 88/328 (26%), Positives = 167/328 (50%)

Query:    42 PTEEAIDILTKSYKSSDNYLQ-LRSQ--VAEICKAQDSGALEKKSAHADFLTQCIVLTSR 98
             P E  +D++   ++   + L  L S+    ++ K         ++   + +   ++L +R
Sbjct:   250 PAEYVLDLINTDFQGDSSVLDDLVSKWNSGDVHKVGTESVQLTEATTINEMQNILILIAR 309

Query:    99 SFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIG 158
             S     RD+  Y+ RL +Y+ L I + TV+  L     +IQ   + + F  ++++FM++ 
Sbjct:   310 SLTKARRDILTYYVRLVMYLGLAILMGTVWLRLQNGQKNIQPFINAIFFSGAFMSFMSVA 369

Query:   159 GFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQ 218
               PS++ED++ +++ER+NG YG  AF   N    LP+L LI+ +   I +++   H+   
Sbjct:   370 YIPSYLEDIQSYKKERMNGLYGPLAFSLANFLVGLPFLFLIAAVFSVITFFMVNFHQTAS 429

Query:   219 HFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHP 278
              F Y+++ LF  ++  ES+   +AS+ PN++  +   A   GL +  GGF  +P+++ + 
Sbjct:   430 GFWYYLMWLFLDLVAAESMTTFIASVFPNFVVSLAITAFANGLWMAVGGFL-VPSNILNV 488

Query:   279 FWKYPLYYIAFHKYAYQGMFKNEFEGLKF----------DNNLDGEQVLRDKWQLQ-MGY 327
             FW Y  Y+I + +Y +QGM  NEF   +F          D+ L  +  +  K  L+ +GY
Sbjct:   489 FWYYTFYWIDYQRYVFQGMIFNEFTNREFRCGDGCHCMYDSPLASQCKISGKAVLESLGY 548

Query:   328 S---KWVDLAILFGMVVFYRLVFLGIIK 352
                 K + + +L  +V  YR     ++K
Sbjct:   549 GNYDKGLWIGVLIALVFVYRFATYIVLK 576

GO:0005524 "ATP binding" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

UNIPROTKB|Q5A0X6 CaO19.10632 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 367 (134.2 bits), Expect = 2.3e-33, P = 2.3e-33
 Identities = 88/328 (26%), Positives = 167/328 (50%)

Query:    42 PTEEAIDILTKSYKSSDNYLQ-LRSQ--VAEICKAQDSGALEKKSAHADFLTQCIVLTSR 98
             P E  +D++   ++   + L  L S+    ++ K         ++   + +   ++L +R
Sbjct:   250 PAEYVLDLINTDFQGDSSVLDDLVSKWNSGDVHKVGTESVQLTEATTINEMQNILILIAR 309

Query:    99 SFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIG 158
             S     RD+  Y+ RL +Y+ L I + TV+  L     +IQ   + + F  ++++FM++ 
Sbjct:   310 SLTKARRDILTYYVRLVMYLGLAILMGTVWLRLQNGQKNIQPFINAIFFSGAFMSFMSVA 369

Query:   159 GFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQ 218
               PS++ED++ +++ER+NG YG  AF   N    LP+L LI+ +   I +++   H+   
Sbjct:   370 YIPSYLEDIQSYKKERMNGLYGPLAFSLANFLVGLPFLFLIAAVFSVITFFMVNFHQTAS 429

Query:   219 HFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHP 278
              F Y+++ LF  ++  ES+   +AS+ PN++  +   A   GL +  GGF  +P+++ + 
Sbjct:   430 GFWYYLMWLFLDLVAAESMTTFIASVFPNFVVSLAITAFANGLWMAVGGFL-VPSNILNV 488

Query:   279 FWKYPLYYIAFHKYAYQGMFKNEFEGLKF----------DNNLDGEQVLRDKWQLQ-MGY 327
             FW Y  Y+I + +Y +QGM  NEF   +F          D+ L  +  +  K  L+ +GY
Sbjct:   489 FWYYTFYWIDYQRYVFQGMIFNEFTNREFRCGDGCHCMYDSPLASQCKISGKAVLESLGY 548

Query:   328 S---KWVDLAILFGMVVFYRLVFLGIIK 352
                 K + + +L  +V  YR     ++K
Sbjct:   549 GNYDKGLWIGVLIALVFVYRFATYIVLK 576

GO:0005524 "ATP binding" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2150290 ABCG23 "ATP-binding cassette G23" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 4.2e-29, P = 4.2e-29
 Identities = 85/323 (26%), Positives = 171/323 (52%)

Query:    42 PTEEAIDILT--KSYK-SSDNYLQLRSQVAEICKAQDSGALEKKSAHADF-LTQCIVLTS 97
             P E A++I+   +++K +S   ++  S   E    ++ G + KK A     +T+   L S
Sbjct:   300 PIEFAMEIVESLRTFKPNSVAVVESSSMWPE--NNENDGIISKKEAFRVLDVTEISYLCS 357

Query:    98 RSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTI 157
             R    +YR    +  R    V+ G+GL +V++ L  D   +  R  L  F  S+L   T+
Sbjct:   358 RFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAERLGLFAFSLSFLLSSTV 417

Query:   158 GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGY 217
                P ++ + +V  +E   G Y  ++++  NT + +P+L ++SL+    VY++ GL+   
Sbjct:   418 EALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSI 477

Query:   218 QHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPND-LP 276
             Q F +FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F +P + +P
Sbjct:   478 QAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYF-IPKEKIP 536

Query:   277 HPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDKWQLQMGYS 328
              P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL+++  L    +
Sbjct:   537 KP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERG-LDKD-T 592

Query:   329 KWVDLAILFGMVVFYRLVFLGII 351
             +W+++ I+    VFYR++  GI+
Sbjct:   593 RWINVGIMLAFFVFYRILCWGIL 615

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2117507 ABCG4 "ATP-binding cassette G4" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 4.9e-27, P = 4.9e-27
 Identities = 94/330 (28%), Positives = 160/330 (48%)

Query:    44 EEAIDILTKSYKSSDNY-LQLRSQVAEICKA-QDSGALEKKSAHADFLTQCIVLTSRSFV 101
             E A++IL       +N  + L     E  K  Q    +  KS+    +T+  +L+SR + 
Sbjct:   254 EYAMEILQNIRDPYENANIALPDHCPESKKQNQKQSIVRYKSSR---ITEISLLSSRFWK 310

Query:   102 NMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFP 161
              +YR        +   +++G+ L T++ N+GT    I+ R  L  F  ++L   T    P
Sbjct:   311 IIYRTRQLLLTNILESLVVGLVLGTIYLNIGTGKEGIRKRFGLFAFTLTFLLSSTTQTLP 370

Query:   162 SFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFI 221
              F+++  +  RE  +G Y  ++ +  NT   LPYL LI++I    +Y+L GL   +Q   
Sbjct:   371 IFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALA 430

Query:   222 YFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWK 281
             YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+F     LP  +W 
Sbjct:   431 YFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPK-YWL 489

Query:   282 YPLYYIAFHKYAYQGMFKNEFEGLK------FD----NN--LDGEQVLRDKWQLQMGYSK 329
             + +Y+ + +KYA   +  NE+  L       F+    N+  + G  VL DK  L     +
Sbjct:   490 F-MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVL-DKNGLHER-QR 546

Query:   330 WVDLAILFGMVVFYR-LVFLGIIKTVEKMK 358
             W ++ +L G  V YR L FL ++K V   K
Sbjct:   547 WFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

TAIR|locus:2009640 ABCG10 "ATP-binding cassette G10" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 72/284 (25%), Positives = 140/284 (49%)

Query:    65 SQVAEICKAQDSGALEKKSAHAD-FLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIG 123
             S+  + C     G L +  +H++  L +  +L  RS  N++R    +  R     + G+ 
Sbjct:   306 SKTWKSCYISAGGELHQSDSHSNSVLEEVQILGQRSCKNIFRTKQLFTTRALQASIAGLI 365

Query:   124 LATVFSNLGTDNNSIQA-RGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGAT 182
             L +++ N+G      +  R     F+ ++L   T  G P F++D ++  RE     Y   
Sbjct:   366 LGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVL 425

Query:   183 AFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVA 242
             ++V  +T   +P+L +IS++    VY+L GL      F+YF L+++  +L+  S +   +
Sbjct:   426 SYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFS 485

Query:   243 SLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF 302
             +LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+
Sbjct:   486 ALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEY 543

Query:   303 EGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLV 346
              G  F    D    L++         KW +L I+   +V YR++
Sbjct:   544 RGDVFLKQQD----LKES-------QKWSNLGIMASFIVGYRVL 576

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.3594.1 white-brown-complex ABC transporter family (622 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	392
TIGR00955	617	TIGR00955, 3a01204, The Eye Pigment Precursor Tran	6e-32
pfam01061	210	pfam01061, ABC2_membrane, ABC-2 type transporter	6e-29
TIGR00956	1394	TIGR00956, 3a01205, Pleiotropic Drug Resistance (P	1e-21
TIGR00956	1394	TIGR00956, 3a01205, Pleiotropic Drug Resistance (P	2e-14
PLN03140	1470	PLN03140, PLN03140, ABC transporter G family membe	8e-08

>gnl|CDD|233207 TIGR00955, 3a01204, The Eye Pigment Precursor Transporter (EPP) Family protein

 Score =  127 bits (320), Expect = 6e-32
 Identities = 78/363 (21%), Positives = 148/363 (40%), Gaps = 28/363 (7%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAI-DILTKSYKSSDNY 60
            FF+  G PCP   NP+D +++ +       I           E I D    S    D  
Sbjct: 256 PFFSDLGHPCPENYNPADFYVQVL-----AVIPGSENESRERIEKICDSFAVSDIGRDML 310

Query: 61  LQLRSQVAEICK-AQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVL 119
           +       +     +DS  +E    +A + TQ   L  RS++++ RD      RL   ++
Sbjct: 311 VNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMM 370

Query: 120 LGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTI-GGFPSFVEDMKVFERERLNGH 178
             I +  ++   G     +Q     L    + +TF  +      F  ++ VF RE  +G 
Sbjct: 371 TAILIGLIYLGQGLTQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGL 430

Query: 179 YGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLM 238
           Y  +A+    T + LP   ++  +  +I Y++ GL  G  HF+ F+ L+     +  S  
Sbjct: 431 YRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFG 490

Query: 239 MIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMF 298
            +++    +    +  G       +L GGFF   + +P  ++K+ L Y+++ +Y  +G+ 
Sbjct: 491 YLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIP-VYFKW-LSYLSWFRYGNEGLL 548

Query: 299 KNEFEGLK----FDNNL------DGEQVLRDKWQLQMGYSK---WVDLAILFGMVVFYRL 345
            N++  +        N        GE +L       + +     ++DL  L  ++ F+RL
Sbjct: 549 INQWSDVDNIECTSANTTGPCPSSGEVILE-----TLSFRNADLYLDLIGLVILIFFFRL 603

Query: 346 VFL 348
           +  
Sbjct: 604 LAY 606

[Transport and binding proteins, Other]. Length = 617

>gnl|CDD|216273 pfam01061, ABC2_membrane, ABC-2 type transporter

 Score =  111 bits (280), Expect = 6e-29
 Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 5/214 (2%)

Query: 90  TQCIVLTSRSFVNMYRDLGY-YWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFV 148
           TQ   L  R F+  +RD      +RL   +L+ +   TVF NL T    +   G L   +
Sbjct: 1   TQLKALLKREFLRRWRDPSLGLLWRLIQPLLMALVFGTVFGNLDTSLGGLNRPGLLFFSI 60

Query: 149 ASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVY 208
                    G  P F+ +  V ERE  +  Y  +A+V       LP   L ++I   IVY
Sbjct: 61  LFNAFSSLTGISPVFIRERGVLERELASPLYSPSAYVLAKILVELPISLLQAIIFLLIVY 120

Query: 209 YLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGF 268
           ++ GL      F  F+L+L    L    L + +A+L P++      G  +   ++L  GF
Sbjct: 121 FMVGLP--VSRFFLFLLVLLLTALAASGLGLFIAALAPSFEDASQIGPLLLLPLLLLSGF 178

Query: 269 FRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF 302
           F   + +P   W   +YY+    YA + +  NEF
Sbjct: 179 FIPVDSMPG--WLQWIYYLNPLTYAIEALRANEF 210

Length = 210

>gnl|CDD|233208 TIGR00956, 3a01205, Pleiotropic Drug Resistance (PDR) Family protein

 Score = 97.1 bits (242), Expect = 1e-21
 Identities = 84/394 (21%), Positives = 162/394 (41%), Gaps = 53/394 (13%)

Query: 2   QFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYL 61
           Q+F   GF CP  Q  +D FL ++    ++ I+ G    +P           +++S  Y 
Sbjct: 300 QYFEKMGFKCPDRQTTAD-FLTSLTSPAERQIKPGYEKKVP--RTPQEFETYWRNSPEYA 356

Query: 62  QLRSQVAEI---CKAQDSGALEKKSAHAD--------------FLTQCIVLTSRSFVNMY 104
           QL  ++ E    C   D+    ++S  A               F  Q     +R+F+ M 
Sbjct: 357 QLMKEIDEYLDRCSESDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMK 416

Query: 105 RDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFV 164
            +  +  F +   +++ + L++VF NL  + +   +RG  L F   +  F ++    S  
Sbjct: 417 GNPSFTLFMVFGNIIMALILSSVFYNLPKNTSDFYSRGGALFFAILFNAFSSLLEIASMY 476

Query: 165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFV 224
           E   + E+ R    Y  +A    +  S +P+  + S++   I+Y++         F +++
Sbjct: 477 EARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYL 536

Query: 225 LLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPL 284
           L+LF C L +  L   + ++    L+  +T A I  L +     F +P      + K+ +
Sbjct: 537 LILFICTLAMSHLFRSIGAVTKT-LSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKW-I 594

Query: 285 YYIAFHKYAYQGMFKNEFEGLKFDNN------------------------------LDGE 314
           YY+    YA++ +  NEF G +F+ +                              +DG+
Sbjct: 595 YYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGD 654

Query: 315 QVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFL 348
             L+  +Q    + KW +  I+ G  VF+  V++
Sbjct: 655 DYLKLSFQYYNSH-KWRNFGIIIGFTVFFFFVYI 687

[Transport and binding proteins, Other]. Length = 1394

>gnl|CDD|233208 TIGR00956, 3a01205, Pleiotropic Drug Resistance (PDR) Family protein

 Score = 74.8 bits (184), Expect = 2e-14
 Identities = 64/312 (20%), Positives = 123/312 (39%), Gaps = 31/312 (9%)

Query: 1    MQFFALNGFP-CPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDN 59
            + +F  +G P CP   NP++  L+ I             G  P   A     + +++S  
Sbjct: 996  INYFEKHGAPKCPEDANPAEWMLEVI-------------GAAPGAHANQDYHEVWRNSSE 1042

Query: 60   YLQLRSQV----AEICKAQDSGALEKKSAHA-DFLTQCIVLTSRSFVNMYRDLGYYWFRL 114
            Y  +++++    AE+ KA+D    +  S +A     Q  ++  R+F   +R   Y + + 
Sbjct: 1043 YQAVKNELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKF 1102

Query: 115  GVYVLLGIGLATVFSNLGTDNNSIQ-ARGSLLMFVASYLTFMTIGGFPSFVEDMKVFE-R 172
             + +   + +   F  +GT    +Q    ++ M    +   +     P FV    ++E R
Sbjct: 1103 FLTIFAALFIGFTFFKVGTSLQGLQNQMFAVFMATVLFNPLIQ-QYLPPFVAQRDLYEVR 1161

Query: 173  ERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGL-------HEGYQHFIYFVL 225
            ER +  +   AF+       +PY  +   I   I YY  G         + ++  + F L
Sbjct: 1162 ERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWL 1221

Query: 226  LLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLY 285
            L     L   +L  +V S  PN     +  + +  + +   G    P+ +P  FW + +Y
Sbjct: 1222 LSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPG-FWIF-MY 1279

Query: 286  YIAFHKYAYQGM 297
              +   Y  Q +
Sbjct: 1280 RCSPFTYLVQAL 1291

[Transport and binding proteins, Other]. Length = 1394

>gnl|CDD|215599 PLN03140, PLN03140, ABC transporter G family member; Provisional

 Score = 54.1 bits (130), Expect = 8e-08
 Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 28/265 (10%)

Query: 106  DLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGF----P 161
            +L  ++F L   +++G    T+F  +GT  ++      ++  + + + F+ I       P
Sbjct: 1213 NLVRFFFTLAAALMVG----TIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQP 1268

Query: 162  SFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFI 221
                +  VF RER  G Y A  +        +PY+ + +     IVY +         F 
Sbjct: 1269 MVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFF 1328

Query: 222  YFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHP--- 278
            +F  + F   L      M+  SL PN     I  A   GL  L  GFF     +P P   
Sbjct: 1329 WFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFF-----IPRPKIP 1383

Query: 279  ---FWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDG-EQVLRDKWQLQMGYSKWVDL- 333
                W Y +  +A+  Y   G+  +++  ++    + G       KW +Q  Y    D  
Sbjct: 1384 KWWVWYYWICPVAWTVY---GLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFM 1440

Query: 334  ----AILFGMVVFYRLVFLGIIKTV 354
                A+L G  VF+  +F   I+T+
Sbjct: 1441 GPVAAVLVGFTVFFAFIFAFCIRTL 1465

Length = 1470

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	392
TIGR00955	617	3a01204 The Eye Pigment Precursor Transporter (EPP	100.0
TIGR00956	1394	3a01205 Pleiotropic Drug Resistance (PDR) Family p	100.0
PLN03140	1470	ABC transporter G family member; Provisional	100.0
PLN03211	659	ABC transporter G-25; Provisional	100.0
TIGR00956	1394	3a01205 Pleiotropic Drug Resistance (PDR) Family p	100.0
PLN03140	1470	ABC transporter G family member; Provisional	100.0
KOG0061	613	consensus Transporter, ABC superfamily (Breast can	100.0
KOG0065	1391	consensus Pleiotropic drug resistance proteins (PD	100.0
KOG0065	1391	consensus Pleiotropic drug resistance proteins (PD	100.0
PF01061	210	ABC2_membrane: ABC-2 type transporter; InterPro: I	99.88
TIGR01291	253	nodJ ABC-2 type transporter, NodJ family. Nearly a	99.76
TIGR01247	236	drrB daunorubicin resistance ABC transporter membr	99.73
TIGR00025	232	Mtu_efflux ABC transporter efflux protein, DrrB fa	99.72
TIGR03861	253	phenyl_ABC_PedC alcohol ABC transporter, permease	99.72
PRK15066	257	inner membrane transport permease; Provisional	99.66
TIGR03062	208	pip_yhgE_Cterm YhgE/Pip C-terminal domain. This fa	99.57
TIGR01248	152	drrC daunorubicin resistance protein C. The model	99.29
COG0842	286	ABC-type multidrug transport system, permease comp	99.27
COG1682	263	TagG ABC-type polysaccharide/polyol phosphate expo	98.95
TIGR03518	240	ABC_perm_GldF gliding motility-associated ABC tran	98.84
PF12679	277	ABC2_membrane_2: ABC-2 family transporter protein	98.62
PRK15176	264	Vi polysaccharide export inner membrane protein Ve	98.6
PF12698	344	ABC2_membrane_3: ABC-2 family transporter protein;	98.48
PF03379	215	CcmB: CcmB protein; InterPro: IPR003544 Within mit	98.19
PF06422	103	PDR_CDR: CDR ABC transporter; InterPro: IPR010929	97.78
TIGR01190	211	ccmB heme exporter protein CcmB. This model descri	97.7
COG1277	278	NosY ABC-type transport system involved in multi-c	97.68
COG4587	268	ABC-type uncharacterized transport system, permeas	97.41
PF12051	382	DUF3533: Protein of unknown function (DUF3533); In	96.99
TIGR03733	248	lanti_perm_MutG lantibiotic protection ABC transpo	96.98
COG1511	780	Predicted membrane protein [Function unknown]	96.89
COG2386	221	CcmB ABC-type transport system involved in cytochr	96.88
PF08370	65	PDR_assoc: Plant PDR ABC transporter associated; I	96.46
TIGR01257	2272	rim_protein retinal-specific rim ABC transporter.	96.17
PF06182	229	ABC2_membrane_6: ABC-2 family transporter protein;	95.49
COG3559	536	TnrB3 Putative exporter of polyketide antibiotics	95.46
PF12730	232	ABC2_membrane_4: ABC-2 family transporter protein	95.33
COG1668	407	NatB ABC-type Na+ efflux pump, permease component	94.48
TIGR01257	2272	rim_protein retinal-specific rim ABC transporter.	92.3
TIGR03732	241	lanti_perm_MutE lantibiotic protection ABC transpo	91.74
COG4200	239	Uncharacterized protein conserved in bacteria [Fun	89.62
PF09847	449	DUF2074: Predicted permease (DUF2074); InterPro: I	86.57

>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein

Probab=100.00  E-value=4.2e-52  Score=426.71  Aligned_cols=345  Identities=21%  Similarity=0.378  Sum_probs=299.8

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcCC---C
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDS---G   77 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~   77 (392)
                      ++||+++|++||++.|||||++|+++.+.+.+.        +..+..+++.+.|++++.+++..+..+.......+   .
T Consensus       255 ~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  326 (617)
T TIGR00955       255 VPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN--------ESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKD  326 (617)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHHHhhcCccccc--------chHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccc
Confidence            379999999999999999999999986543221        12345667888898887776554443322211000   0


Q ss_pred             --ccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHH
Q 016275           78 --ALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFM  155 (392)
Q Consensus        78 --~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~  155 (392)
                        .....++.++++.|+.++++|.+++.+|||.++..++++.+++++++|.+|++++.++.+++++.|++|+++++..+.
T Consensus       327 ~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~~~~~~~g~lf~~~~~~~f~  406 (617)
T TIGR00955       327 SENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQKGVQNINGALFLFLTNMTFQ  406 (617)
T ss_pred             cccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence              112235678999999999999999999999999999999999999999999999999999999999999988877777


Q ss_pred             hh-cCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHH
Q 016275          156 TI-GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLV  234 (392)
Q Consensus       156 ~~-~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~  234 (392)
                      ++ .+++.++.||.+|.||+.+|+|++++|++|++++++|..++.+++|++++||++|++.+++.|+.|++++++..+++
T Consensus       407 ~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~  486 (617)
T TIGR00955       407 NVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVA  486 (617)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHH
Confidence            54 56788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcc-C-----
Q 016275          235 ESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF-D-----  308 (392)
Q Consensus       235 ~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~-~-----  308 (392)
                      .++|.++++++++...|..++++++.++++++|++++.++||. || .|++|+||++|++++++.|||++.++ +     
T Consensus       487 ~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~-~~-~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~  564 (617)
T TIGR00955       487 TSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPV-YF-KWLSYLSWFRYGNEGLLINQWSDVDNIECTSAN  564 (617)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccH-HH-HHHHHcCHHHHHHHHHHHHHhCCCccccccCcC
Confidence            9999999999999999999999999999999999999999998 44 56999999999999999999998764 3     


Q ss_pred             ----CCCCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016275          309 ----NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKM  357 (392)
Q Consensus       309 ----~~~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~  357 (392)
                          |..+|+++|+. +|++.++ .|.++++|+++.++|+++++++|+++.+.
T Consensus       565 ~~~~c~~~g~~~l~~-~g~~~~~-~~~~~~il~~~~~~~~~l~~~~L~~~~~~  615 (617)
T TIGR00955       565 TTGPCPSSGEVILET-LSFRNAD-LYLDLIGLVILIFFFRLLAYFALRIRIRR  615 (617)
T ss_pred             cCCCCCcChHHHHHh-cCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence                44579999998 7888764 89999999999999999999999987553

>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein

Probab=100.00  E-value=1.2e-51  Score=452.89  Aligned_cols=351  Identities=21%  Similarity=0.396  Sum_probs=304.9

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhc------
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQ------   74 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~------   74 (392)
                      ++||+++||+||++.|||||++|+++.+... ..++.  +.......+++++.|++|+.+++..++++...+..      
T Consensus       299 ~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~~--e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  375 (1394)
T TIGR00956       299 KQYFEKMGFKCPDRQTTADFLTSLTSPAERQ-IKPGY--EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTK  375 (1394)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHhccChhhhh-ccccc--cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhH
Confidence            4799999999999999999999998764221 11111  11112345689999999998877666554432110      


Q ss_pred             -----------CCCccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHH
Q 016275           75 -----------DSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGS  143 (392)
Q Consensus        75 -----------~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g  143 (392)
                                 ........++..|+++|+++|++|++++.+|||..+..++++.+++|+++|++|+++++++.+++++.|
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~~~~~r~g  455 (1394)
T TIGR00956       376 EAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTSDFYSRGG  455 (1394)
T ss_pred             HHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Confidence                       001122345778999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHH
Q 016275          144 LLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYF  223 (392)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~  223 (392)
                      ++|+++++.+++++..++.+..||++|.||+.+++|++++|++|++++++|..++.+++|.+++|||+|++.+++.|+.|
T Consensus       456 ~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f  535 (1394)
T TIGR00956       456 ALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFY  535 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHH
Confidence            99999999888887777777889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcC
Q 016275          224 VLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFE  303 (392)
Q Consensus       224 ~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~  303 (392)
                      +++++++.+++.+++.+++++++|...|+.++++++++++++||+++|.++||.  |..|++|+||++|++++++.|||+
T Consensus       536 ~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~--~~~W~~yisp~~yafeal~~nef~  613 (1394)
T TIGR00956       536 LLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLG--WSKWIYYVNPLAYAFESLMVNEFH  613 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccH--HHHHHHHcCHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999998  556699999999999999999999


Q ss_pred             CCccCCC------------------------------CCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016275          304 GLKFDNN------------------------------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKT  353 (392)
Q Consensus       304 ~~~~~~~------------------------------~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~  353 (392)
                      +.+++|+                              .+|+++|+..++++.++ .|+++++|++++++|++++++++++
T Consensus       614 ~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~-~w~n~gil~~~~v~f~~~~~l~l~~  692 (1394)
T TIGR00956       614 GRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSH-KWRNFGIIIGFTVFFFFVYILLTEF  692 (1394)
T ss_pred             CCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccch-hhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9887662                              37889999767887665 9999999999999999999999998


Q ss_pred             hhcc
Q 016275          354 VEKM  357 (392)
Q Consensus       354 ~~~~  357 (392)
                      .+..
T Consensus       693 ~~~~  696 (1394)
T TIGR00956       693 NKGA  696 (1394)
T ss_pred             cccc
Confidence            7633

>PLN03140 ABC transporter G family member; Provisional

Probab=100.00  E-value=4.4e-51  Score=447.18  Aligned_cols=342  Identities=20%  Similarity=0.299  Sum_probs=300.0

Q ss_pred             Chhhhhc-CCC-CCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcCCCc
Q 016275            1 MQFFALN-GFP-CPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGA   78 (392)
Q Consensus         1 v~YF~~~-G~~-cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~   78 (392)
                      ++||+++ |++ ||++.|||||+||+++.+.+..             ...++++.|++|+.+++..+.+++...+.++..
T Consensus      1113 ~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~-------------~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 1179 (1470)
T PLN03140       1113 IEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVK-------------LGIDFAEHYKSSSLYQRNKALVKELSTPPPGAS 1179 (1470)
T ss_pred             HHHHHhcCCCCCCCCCCCchhhhhhhhccccccc-------------ccchHHHHHhccHHHHHHHHHHHHhccCCCCcc
Confidence            4899998 675 9999999999999987542211             113689999999988877666655543221111


Q ss_pred             --cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCh---hhHHHHHHHHHHHHHHHH
Q 016275           79 --LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDN---NSIQARGSLLMFVASYLT  153 (392)
Q Consensus        79 --~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~---~~~~~~~g~l~~~~~~~~  153 (392)
                        ....++.+++++|++++++|+++++||||.++..|+++.+++++++|++|++++++.   .+++++.|++|+.+++.+
T Consensus      1180 ~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 1259 (1470)
T PLN03140       1180 DLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVG 1259 (1470)
T ss_pred             ccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHH
Confidence              123568899999999999999999999999999999999999999999999998764   567788999998888877


Q ss_pred             HHhh-cCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHH
Q 016275          154 FMTI-GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACML  232 (392)
Q Consensus       154 ~~~~-~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~  232 (392)
                      +.++ ..+|.+..||.+|.||+.+|+|++.+|++|++++|+|+.++.+++|.+++||++|++++++.|+.|++++++..+
T Consensus      1260 ~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~ 1339 (1470)
T PLN03140       1260 INNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFL 1339 (1470)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Confidence            7654 457889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCC--
Q 016275          233 LVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN--  310 (392)
Q Consensus       233 ~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~--  310 (392)
                      ++.++|+++++++||.+.|..++++++.++++|||+++|.++||. ||+ |++|+||++|++++++.|||.|.++.|+  
T Consensus      1340 ~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~-~~~-W~~~isp~~y~~~~l~~~~f~~~~~~~~~~ 1417 (1470)
T PLN03140       1340 YFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPK-WWV-WYYWICPVAWTVYGLIVSQYGDVEDTIKVP 1417 (1470)
T ss_pred             HHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCch-HHH-HHHHcCHHHHHHhhhHHHHhCCCCCcccCC
Confidence            999999999999999999999999999999999999999999998 565 6999999999999999999999876553  


Q ss_pred             -----CCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016275          311 -----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK  358 (392)
Q Consensus       311 -----~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~  358 (392)
                           .++++++..++|+++++ .|.+++++++|+++|++++++++++.+++|
T Consensus      1418 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~il~~~~~~f~~~~~~~~~~~~~q~ 1469 (1470)
T PLN03140       1418 GGAPDPTIKWYIQDHYGYDPDF-MGPVAAVLVGFTVFFAFIFAFCIRTLNFQT 1469 (1470)
T ss_pred             CCCCCCcHHHHHHHhcCcCccc-ccchhhhHHHHHHHHHHHHHHHHHHhhccc
Confidence                 34678887879998875 999999999999999999999999988765

>PLN03211 ABC transporter G-25; Provisional

Probab=100.00  E-value=6e-50  Score=410.91  Aligned_cols=341  Identities=18%  Similarity=0.267  Sum_probs=270.0

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHH--Hh-hc---
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEI--CK-AQ---   74 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~-~~---   74 (392)
                      ++||+++|++||++.|||||+||+++.+...+.   .. ..+.....+.+.+.|+++. .++..+..+..  .. ..   
T Consensus       295 ~~~f~~~G~~~P~~~NpADf~ldv~~~~~~~~~---~~-~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  369 (659)
T PLN03211        295 MAYFESVGFSPSFPMNPADFLLDLANGVCQTDG---VS-EREKPNVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFV  369 (659)
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHcCccccCCC---cc-ccccchHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhh
Confidence            479999999999999999999999986532110   00 0011112234556665322 11111111110  00 00   


Q ss_pred             ----CCCc-cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHH
Q 016275           75 ----DSGA-LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVA  149 (392)
Q Consensus        75 ----~~~~-~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~  149 (392)
                          .... .....+.++|++|+.+|++|.+++ +||+.+...|+++.+++|+++|++|++.+  ..+++++.|++|+++
T Consensus       370 ~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~--~~~~~~r~g~lff~~  446 (659)
T PLN03211        370 GSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD--FRDVQDRLGLLFFIS  446 (659)
T ss_pred             hcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHH
Confidence                0000 011234578999999999999998 89999999999999999999999999985  678999999999998


Q ss_pred             HHHHHHh-hcCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHH
Q 016275          150 SYLTFMT-IGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLF  228 (392)
Q Consensus       150 ~~~~~~~-~~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~  228 (392)
                      ++.++.+ +..++.|+.||++|.||+.+|+|++++|++|++++++|..++.+++|++++|||+|++.++++|+.|+++++
T Consensus       447 ~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~  526 (659)
T PLN03211        447 IFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLL  526 (659)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHH
Confidence            8766544 578899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCc--
Q 016275          229 ACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK--  306 (392)
Q Consensus       229 l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~--  306 (392)
                      +..+++.++|++++++++|...|+.++++++.++++|||++++  +||+  |..|++|+||++|++++++.|||.+.+  
T Consensus       527 l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~--~~~W~~ylS~~~y~~eal~~nef~~~~~~  602 (659)
T PLN03211        527 GYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPS--CMAWIKYISTTFYSYRLLINVQYGEGKRI  602 (659)
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchH--HHHHHHHhCHHHHHHHHHHHHhcCCcccc
Confidence            9999999999999999999999999999999999999999997  7998  445699999999999999999997643  


Q ss_pred             ---cCCCC------CHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          307 ---FDNNL------DGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       307 ---~~~~~------~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                         +.|+.      .+..++.. ..++. .+.|.++++|+++.+++++++|++|++.+
T Consensus       603 ~~~~~C~~~~~~~~~~c~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~L~~~~  658 (659)
T PLN03211        603 SSLLGCSLPHGSDRASCKFVEE-DVAGQ-ISPATSVSVLIFMFVGYRLLAYLALRRIK  658 (659)
T ss_pred             ccccCCCCcccCCCCCCccchh-hhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence               24531      11223333 22232 24899999999999999999999998654

>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein

Probab=100.00  E-value=2.5e-49  Score=434.80  Aligned_cols=338  Identities=17%  Similarity=0.280  Sum_probs=292.1

Q ss_pred             ChhhhhcCC-CCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcC---C
Q 016275            1 MQFFALNGF-PCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQD---S   76 (392)
Q Consensus         1 v~YF~~~G~-~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~   76 (392)
                      ++||+++|+ +||++.|||||+||+++.+.+..             ..+++.+.|++|+.+++..++++.......   .
T Consensus       996 ~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~-------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 1062 (1394)
T TIGR00956       996 INYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH-------------ANQDYHEVWRNSSEYQAVKNELDRLEAELSKAED 1062 (1394)
T ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc-------------hhccHHHHHhcCHHHHHHHHHHHHhhcccccCcc
Confidence            489999996 99999999999999998643211             123688999999887766665555433211   0


Q ss_pred             --CccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHH
Q 016275           77 --GALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTF  154 (392)
Q Consensus        77 --~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~  154 (392)
                        ......++.+++++|+++|++|.+++.||||.++..|+++.+++|+++|++|+++++++.+++++.|.+|+.+++..+
T Consensus      1063 ~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~~~~i~~~~g~~f~~~~~~~~ 1142 (1394)
T TIGR00956      1063 DNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTSLQGLQNQMFAVFMATVLFNP 1142 (1394)
T ss_pred             ccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence              111224678999999999999999999999999999999999999999999999999999999999999988777666


Q ss_pred             HhhcCCchhhHHHHHH-HHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhh-------HHHHHHH
Q 016275          155 MTIGGFPSFVEDMKVF-ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQH-------FIYFVLL  226 (392)
Q Consensus       155 ~~~~~~~~~~~er~~~-~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~-------f~~~~l~  226 (392)
                      .....++.|+.||.++ .||+.+|+|++.+|++|++++|+|+.++.+++|.+++||++|++.++..       |+.++++
T Consensus      1143 ~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~ 1222 (1394)
T TIGR00956      1143 LIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLL 1222 (1394)
T ss_pred             HHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHH
Confidence            6556788888898886 8999999999999999999999999999999999999999999987766       9999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCc
Q 016275          227 LFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK  306 (392)
Q Consensus       227 ~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~  306 (392)
                      ++++.+++.++|+++++++|+...|..++++++.++++|||+++|.++||. +|. |++|+||++|++++++.++|++.+
T Consensus      1223 ~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~-~~~-w~~~~sp~~y~~~~l~~~~~~~~~ 1300 (1394)
T TIGR00956      1223 STMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPG-FWI-FMYRCSPFTYLVQALLSTGLADVP 1300 (1394)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcH-HHh-HHHhcCHHHHHHHHHHHHHcCCCe
Confidence            999999999999999999999999999999999999999999999999998 666 599999999999999999998877


Q ss_pred             cCCC--------------------------------------------CCHHHHHHhhhccccCchhHHHHHHHHHHHHH
Q 016275          307 FDNN--------------------------------------------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVF  342 (392)
Q Consensus       307 ~~~~--------------------------------------------~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~  342 (392)
                      +.|.                                            .+|+++|+. ++++.++ .|+|++++++++++
T Consensus      1301 ~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~-~~~~~~~-~w~~~~i~~~~~~~ 1378 (1394)
T TIGR00956      1301 VTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEP-ISSKYSG-RWRNFGIFIAFIFF 1378 (1394)
T ss_pred             eecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHH-cCCcccc-cccchhhhhHHHHH
Confidence            5331                                            389999998 6776664 99999999999999


Q ss_pred             HHHHHHHHHHHhhc
Q 016275          343 YRLVFLGIIKTVEK  356 (392)
Q Consensus       343 ~~~la~~~l~~~~~  356 (392)
                      + ++++++++++.+
T Consensus      1379 ~-~~~~~~l~~~~r 1391 (1394)
T TIGR00956      1379 N-IIATVFFYWLAR 1391 (1394)
T ss_pred             H-HHHHHhhheEEE
Confidence            9 778888887643

>PLN03140 ABC transporter G family member; Provisional

Probab=100.00  E-value=3.2e-49  Score=432.57  Aligned_cols=351  Identities=17%  Similarity=0.248  Sum_probs=298.6

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhc--CCCc
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQ--DSGA   78 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~   78 (392)
                      .+||+++||+||++.|||||++|+++.+. ++..+.....+.....+++++++|++|+.+++..++++...+..  +...
T Consensus       426 ~~yF~~lGf~cP~~~n~ADFl~~v~s~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  504 (1470)
T PLN03140        426 LEFFESCGFKCPERKGTADFLQEVTSKKD-QEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAA  504 (1470)
T ss_pred             HHHHHHcCCCCCCCCChHHHHHHhcCchh-hhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhccccc
Confidence            37999999999999999999999998542 11111011112122346789999999988877666554432211  1112


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCC---hhhHHHHHHHHHHHHHHHHHH
Q 016275           79 LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTD---NNSIQARGSLLMFVASYLTFM  155 (392)
Q Consensus        79 ~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~---~~~~~~~~g~l~~~~~~~~~~  155 (392)
                      ....++..+++.|++.+++|.++.++||+..+..++++.+++|+++|++|++.+.+   ..+.+...|.+||.+++.++.
T Consensus       505 ~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~  584 (1470)
T PLN03140        505 LVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFN  584 (1470)
T ss_pred             ccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            23456889999999999999999999999999999999999999999999998643   234567788888888888888


Q ss_pred             hhcCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHH
Q 016275          156 TIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVE  235 (392)
Q Consensus       156 ~~~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      ++..++.+..||++|.|||..++|++++|++|++++++|..++.+++|++++|||+|+++++++|+.|+++++++.+++.
T Consensus       585 ~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~  664 (1470)
T PLN03140        585 GFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAA  664 (1470)
T ss_pred             HHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            77788889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccC---C---
Q 016275          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD---N---  309 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~---~---  309 (392)
                      +++.++++++++...|+.++++++++++++||+++|.++||+  |..|++|+||++|+++|++.|||.+..+.   |   
T Consensus       665 ~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~--w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~  742 (1470)
T PLN03140        665 GIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPN--WWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDN  742 (1470)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCch--HHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCC
Confidence            999999999999999999999999999999999999999998  45569999999999999999999886543   2   


Q ss_pred             -CCCHHHHHHhhhccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          310 -NLDGEQVLRDKWQLQMGY-SKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       310 -~~~g~~~l~~~~~~~~~~-~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                       ..+|+++|+. +|++.++ +.|.++++|++++++|++++++++++.+
T Consensus       743 ~~~~G~~~L~~-~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~  789 (1470)
T PLN03140        743 STRLGTAVLNI-FDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN  789 (1470)
T ss_pred             CcccHHHHHHh-cCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence             2689999988 7887543 4799999999999999999999999865

>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-47  Score=389.50  Aligned_cols=344  Identities=29%  Similarity=0.553  Sum_probs=287.3

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcCCCccc
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGALE   80 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~   80 (392)
                      ++||+++|++||++.|||||++|+++.+ ++.++      .....+.....+.++......+...   ...+.-......
T Consensus       259 ~~ff~~~G~~~P~~~Npadf~l~l~s~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  328 (613)
T KOG0061|consen  259 LEFFSSLGFPCPELENPADFLLDLLSVD-SGTRE------LEEAVRIAKLINKFSQTDNLKKTLE---ALEKSLSTSKKV  328 (613)
T ss_pred             HHHHHhCCCCCCCcCChHHHHHHHHccC-CCchh------HHhHHHHHHHhhhccccchhhhhHH---HHhhhccccccc
Confidence            4799999999999999999999999965 11110      1112222233333332111111111   111100001111


Q ss_pred             cccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHhh-cC
Q 016275           81 KKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTI-GG  159 (392)
Q Consensus        81 ~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~  159 (392)
                      +....++|+.|+..|++|.+++.+|||.+...|+++.+++++++|.+|++.+.+..+++++.|++++++.+..+.++ ++
T Consensus       329 ~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~~~~~~  408 (613)
T KOG0061|consen  329 EIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGIQNRLGLFFFILSFMTFLSMFGA  408 (613)
T ss_pred             ccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            11228999999999999999999999999999999999999999999999999999999999999999888877765 47


Q ss_pred             CchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 016275          160 FPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMM  239 (392)
Q Consensus       160 ~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~  239 (392)
                      ++.|+.||++|.||+.+|+|+.++|++|+.++++|..++.+++|++++||++|++++...|+.+++++++..+++.++|+
T Consensus       409 i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~  488 (613)
T KOG0061|consen  409 VPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGL  488 (613)
T ss_pred             HHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcc--------CCCC
Q 016275          240 IVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF--------DNNL  311 (392)
Q Consensus       240 ~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~--------~~~~  311 (392)
                      +++++++|...|..++++++.++++++|++++.+.+|+  |.+|++|+|+++|++|++++|||.+...        .|..
T Consensus       489 ~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~--~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~  566 (613)
T KOG0061|consen  489 FISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPK--YFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCES  566 (613)
T ss_pred             HHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccH--HHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccc
Confidence            99999999999999999999999999999999999998  5567999999999999999999996222        3447


Q ss_pred             CHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016275          312 DGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK  358 (392)
Q Consensus       312 ~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~  358 (392)
                      +|.++++. .+++.++ .|.|+.+++++.++|++++|+.++++.+.+
T Consensus       567 ~~~~~l~~-~~~~~~~-~~~~l~~l~~~~~~~~il~y~~L~~~~~~~  611 (613)
T KOG0061|consen  567 TGEDVLKQ-LGFEDSS-FWLDLLVLLAFIVFFRVLGYLALRFRVKRK  611 (613)
T ss_pred             cHHHHHHh-cCCcccc-cchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            89999999 6776554 999999999999999999999999987654

>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-45  Score=381.71  Aligned_cols=354  Identities=22%  Similarity=0.396  Sum_probs=309.8

Q ss_pred             ChhhhhcCCCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcCC--Cc
Q 016275            1 MQFFALNGFPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDS--GA   78 (392)
Q Consensus         1 v~YF~~~G~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~--~~   78 (392)
                      ++||+++||.||+++++|||+.++.+.+ +....+...+.+.....++++.+.|++++.+++...+++...++..+  ..
T Consensus       350 ~~yFe~~Gf~cP~r~~~ADfLt~vts~k-~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~a  428 (1391)
T KOG0065|consen  350 LPYFEDMGFKCPPRKGTADFLTEVTSKK-DQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAA  428 (1391)
T ss_pred             HHHHHhcCccCCCccCHHHHHHHhhcCc-cccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchh
Confidence            4799999999999999999988888732 22222222222334455689999999999999888877766554322  34


Q ss_pred             cccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCC-CChhhHHHHHHHHHHHHHHHHHHhh
Q 016275           79 LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLG-TDNNSIQARGSLLMFVASYLTFMTI  157 (392)
Q Consensus        79 ~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~-~~~~~~~~~~g~l~~~~~~~~~~~~  157 (392)
                      +..+++..+.|.|++.++.|.+....||..++....++.+++++++|.+|++.+ .+..+.+.+.|.+||.+++.++.++
T Consensus       429 l~s~~y~v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~~t~~~~~~~~~~lffsll~~~f~~l  508 (1391)
T KOG0065|consen  429 LVSSKYSVPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPMSTTSGGYSRGGALFFALLFNLFNGL  508 (1391)
T ss_pred             hcCCceeccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccCcccccchhhhhHHHHHHHHHHHHhH
Confidence            566789999999999999999999999999999999999999999999999998 6677889999999999999888888


Q ss_pred             cCCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHH
Q 016275          158 GGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESL  237 (392)
Q Consensus       158 ~~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~  237 (392)
                      .-++.....|+++.|+|...+|+++++.++..+.++|..++.+++|.+|.||+.|+.+++++||.++++++++.+++.++
T Consensus       509 aEi~~~~~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~l  588 (1391)
T KOG0065|consen  509 AEIALTFQRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGL  588 (1391)
T ss_pred             HHHHHHHhhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            88888888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCC-------
Q 016275          238 MMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN-------  310 (392)
Q Consensus       238 g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~-------  310 (392)
                      ..++++++++...|+.++.+.++...+++|+.+|..+||+  |.+|++|+||+.|++|+++.|||++..++|.       
T Consensus       589 Fr~ia~l~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~--W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~  666 (1391)
T KOG0065|consen  589 FRFIASLSRTLSIANLIGGILLLVLFMYGGFVIPKKDMPP--WFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYD  666 (1391)
T ss_pred             HHHHHHhcchHHHHhhHhHHHHHHHHHHcceeeeccccch--HHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCccc
Confidence            9999999999999999999999999999999999999997  6667999999999999999999999888774       


Q ss_pred             --------------------CCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016275          311 --------------------LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK  358 (392)
Q Consensus       311 --------------------~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~  358 (392)
                                          ..|.+++...++++..+ +|++++++++|.++|.++..+++.+.+..+
T Consensus       667 n~~~~~~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~-~Wr~~gillgf~v~f~~~~~ia~~yl~p~~  733 (1391)
T KOG0065|consen  667 NISIENKVCAATGATLGNDYVSGRDYLKVQYQYEYKW-YWRNFGILLGFTVFFNFVFLIALEYLKPLK  733 (1391)
T ss_pred             ccccccccchhhccccCceEEecccccccccccccce-eEeehhHHHHHHHHHHHHHHHHHHhcCccc
Confidence                                23455665545555554 999999999999999999999999876433

>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-45  Score=381.54  Aligned_cols=342  Identities=19%  Similarity=0.294  Sum_probs=300.1

Q ss_pred             ChhhhhcC-CCCCCCCCchhHHHhhhccccchhhhhccCCCCCcHHHHHHHHHHHhcCHhhHHHHHHHHHHHhhcCC---
Q 016275            1 MQFFALNG-FPCPALQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDS---   76 (392)
Q Consensus         1 v~YF~~~G-~~cP~~~NPAD~~ld~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---   76 (392)
                      ++|||++| .+||+..|||||+||+++...+.+.             -.++++.|++|+.+++++++++.+.++.++   
T Consensus      1024 i~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~~-------------~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~ 1090 (1391)
T KOG0065|consen 1024 IEYFESIGGVKCISDENPAEWMLEVIGAGAEASL-------------SVDFAEIWKNSEEYKRNKELVKELSQPPPGFST 1090 (1391)
T ss_pred             HHHHHhcCCccCCCCCChHHHHHhhccccccccc-------------CccHHHHHhccHHHHHHHHHHHHHhcCCccCCc
Confidence            58999986 9999999999999999986543321             127999999999999999999988876444   


Q ss_pred             CccccccCCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHh
Q 016275           77 GALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMT  156 (392)
Q Consensus        77 ~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~  156 (392)
                      +...+.++.+|++.|++.+++|+...+||+|.++..|+++.++.|+++|+.|++.+++..+++|..|.+|+.+.+.....
T Consensus      1091 ~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~~~q~lqn~m~a~yma~v~~~~~~ 1170 (1391)
T KOG0065|consen 1091 DLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGHNVQGLQNAMGAAYMATVFSGPNN 1170 (1391)
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCCcHHHHHHHHHHHHHHHHHhhhhh
Confidence            22345678999999999999999999999999999999999999999999999999999999999999998877666554


Q ss_pred             hc-CCchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHH
Q 016275          157 IG-GFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVE  235 (392)
Q Consensus       157 ~~-~~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      .. ..+.+..||..+.||+.+|+|+..+|++|++++|+|+.++++.+|.++.|+++|+.+++.+++.+++..+++.+...
T Consensus      1171 ~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~ 1250 (1391)
T KOG0065|consen 1171 NQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFT 1250 (1391)
T ss_pred             hhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHH
Confidence            44 44566778889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCC-----
Q 016275          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNN-----  310 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~-----  310 (392)
                      .+|+++..++||...|+.+.+.++..+..|||++.|...||. ||. |.+|+||++|.++++...++++.+..|.     
T Consensus      1251 ~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~-fW~-wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~ 1328 (1391)
T KOG0065|consen 1251 TLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPK-FWI-WMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMN 1328 (1391)
T ss_pred             HHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccc-eee-eeeecCcHHHHHHHHHHHHhCCCceeeecCCcc
Confidence            999999999999999999999999999999999999999999 777 5999999999999999999999887664     


Q ss_pred             -------CCHHHHHHhhhc----cccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016275          311 -------LDGEQVLRDKWQ----LQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK  358 (392)
Q Consensus       311 -------~~g~~~l~~~~~----~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~  358 (392)
                             .+..++++.+++    +.++. ......+...+.+++.+++.+.+++..++|
T Consensus      1329 ~~~pp~g~tcge~m~~~~~~~~Gy~~n~-~a~~~c~~c~y~v~~~~l~~f~~~y~~~wr 1386 (1391)
T KOG0065|consen 1329 YFDPPSGQTCGEFMEDFFGEGTGYLHNP-LATTACVYCAYTVADAFLAAFNIKYLNFWR 1386 (1391)
T ss_pred             ccCCCCCcCHHHHHHHHhccCcceeccC-cceeEEEEeeeehHHHHHHHHHHHHHHHHH
Confidence                   466789999887    55443 333334556788888999999998887655

>PF01061 ABC2_membrane: ABC-2 type transporter; InterPro: IPR013525 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=99.88  E-value=1.8e-24  Score=192.90  Aligned_cols=208  Identities=26%  Similarity=0.365  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHhhcChhHH-HHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHhhc-CCchhhHHH
Q 016275           90 TQCIVLTSRSFVNMYRDLGYY-WFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIG-GFPSFVEDM  167 (392)
Q Consensus        90 ~q~~~l~~R~~~~~~R~~~~~-~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~-~~~~~~~er  167 (392)
                      +|++.+++|+++..+|||... ...++.++++++++|.++.+.++..++. ++.+++...+....+.... ......+|+
T Consensus         1 ~q~~~l~~r~~~~~~r~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (210)
T PF01061_consen    1 RQIWALLRREFKRFWRNPFLGLIWSLIFPLLLLLIFGFIFGKLGNSQDGF-NRPGLIFGSIIFSFFSSISGSSISFERER   79 (210)
T ss_pred             CHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHHHHHHHHhccccccccc-ccceeeehhhHHhhhhhcccchhhhhhhc
Confidence            599999999999999999888 8999999999999999999887444444 6677776666665544443 346788899


Q ss_pred             HHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 016275          168 KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPN  247 (392)
Q Consensus       168 ~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~  247 (392)
                      ..+.||+.++.|++..|.+++.+.+++..++..+++..+.+.+.|++.+  +++.+++.+++...++.++|.+++.++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~g~~~~~~~~~  157 (210)
T PF01061_consen   80 GTLERERASPLYSPFAYLLAKVLSAFLISLIISLIVLIIAYLLFGLDFE--SFFLFLLILLLSILCSSGLGLLLAALFPS  157 (210)
T ss_pred             cccccccccccccchhhheeeccccccccccccchhhhhhhhhhccccc--cchheecccccccccccccccccccchhh
Confidence            9999999999999999999999999999999999999999999899876  66778888888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhc
Q 016275          248 YLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF  302 (392)
Q Consensus       248 ~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~  302 (392)
                      .+.+..+.+.+..+++++||.++|.+.+|+  |.+|+.+++|++|+.|++..++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~sg~~~p~~~lP~--~~~~i~~~~P~~~~~~~~r~~~f  210 (210)
T PF01061_consen  158 FRDASAISSLILLLLFFLSGVFFPLSSLPS--WLRWISYLNPLTYAVEALRAALF  210 (210)
T ss_pred             hhhhhhhhhhcccccccceeeecchHHChH--HHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999997  66779999999999999987764

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). A number of bacterial transport systems have been found to contain integral membrane components that have similar sequences []: these systems fit the characteristics of ATP-binding cassette transporters []. The proteins form homo- or hetero-oligomeric channels, allowing ATP-mediated transport. Hydropathy analysis of the proteins has revealed the presence of 6 possible transmembrane regions. These proteins belong to family 2 of ABC transporters.; GO: 0016020 membrane

>TIGR01291 nodJ ABC-2 type transporter, NodJ family

Probab=99.76  E-value=1.4e-16  Score=146.45  Aligned_cols=237  Identities=14%  Similarity=0.057  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHhhccCCCC---hhhH-HHHHHHHHHHHHHHHHHhhcCCchhh--
Q 016275           92 CIVLTSRSFVNMYRD-LGYYWFRLGVYVLLGIGLATVFSNLGTD---NNSI-QARGSLLMFVASYLTFMTIGGFPSFV--  164 (392)
Q Consensus        92 ~~~l~~R~~~~~~R~-~~~~~~~~~~~~~~~ll~G~~f~~~~~~---~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~--  164 (392)
                      ...+.+|+++.++|+ |..+...+++|+++.+++|..+....++   .+.. +-..|++.+.+++.+.... ....+.  
T Consensus         7 ~~~~~~R~~~~~~r~~~~~~~~~~~~P~~~l~~fg~~~~~~~~~~~g~~y~~f~~pg~l~~~~~~~~~~~~-~~~~~~~~   85 (253)
T TIGR01291         7 WAAVWRRNALAWKKVAAASVLGNLADPLIYLFGLGVGLGKMVGSVDGVSYAAFLAAGMVATSAMTASTFET-IYATFARM   85 (253)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            566779999999999 9999999999999999999988653221   1111 1112444433333222111 111222  


Q ss_pred             HHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016275          165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASL  244 (392)
Q Consensus       165 ~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~  244 (392)
                      +|+..++|-+.++. +...+++||++.+....+++.++...+.+ +.|.... ..+.....++++..++..++|.+++..
T Consensus        86 r~~g~~~~l~~~Pv-~~~~~~~g~~~~~~~~~~~~~~ii~~~~~-~~g~~~~-~~~l~~~~~~ll~~l~~~~lg~~~a~~  162 (253)
T TIGR01291        86 RVTRTWEAMLYTPI-TVGDIVLGEVAWAATKASLAGTIIGVVTA-TLGYIEW-WSLIYILPVIALTGLAFASLSMLVAAL  162 (253)
T ss_pred             HHcccHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhchh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            24445566666666 89999999999998877777766555543 4454432 345555566667788888999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccc
Q 016275          245 VPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQ  324 (392)
Q Consensus       245 ~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~  324 (392)
                      .++.+.+..+.+.+..|++++||.++|.+.+|+  |.+++.+++|++|+.|++....+.+                   +
T Consensus       163 ~~~~~~~~~i~~~i~~pl~flSg~~~P~~~mP~--~lq~i~~~nPlt~~v~~~R~~~~g~-------------------~  221 (253)
T TIGR01291       163 APSYAYFAFYQSLVITPMLFLSGVVFPVFQLND--VIQGMTHFLPLAHSIDDIRPVMLGG-------------------P  221 (253)
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHHhcCHHhChH--HHHHHHHHCcHHHHHHHHHHHHhCC-------------------C
Confidence            999999998999999999999999999999998  7777999999999999986553221                   1


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016275          325 MGYSKWVDLAILFGMVVFYRLVFLGIIKTV  354 (392)
Q Consensus       325 ~~~~~~~~~~iL~~~~v~~~~la~~~l~~~  354 (392)
                      . .+.+.+++++.++.+++..++...+|++
T Consensus       222 ~-~~~~~~~~~l~~~~vv~~~la~~~fr~~  250 (253)
T TIGR01291       222 G-TQVGLHLGALCLYAVVPFFISAALLRRR  250 (253)
T ss_pred             c-HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            1 1256788899999999988887776654

Nearly all members of this subfamily are NodJ which, together with NodI (TIGR01288), acts to export a variety of modified carbohydrate molecules as signals to plant hosts to establish root nodules. The seed alignment includes a highly divergent member from Azorhizobium caulinodans that is, nonetheless, associated with nodulation. This model is designated as subfamily in part because not all sequences derived from the last common ancestral sequence of Rhizobium sp. and Azorhizobium caulinodans NodJ are necessarily nodulation proteins.

>TIGR01247 drrB daunorubicin resistance ABC transporter membrane protein

Probab=99.73  E-value=2.5e-16  Score=143.51  Aligned_cols=227  Identities=14%  Similarity=0.051  Sum_probs=164.2

Q ss_pred             HHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccC-CCC--hhh---H-HHHHHHHHHHHHHHHHHhhcCCchhhHHHHHH
Q 016275           98 RSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNL-GTD--NNS---I-QARGSLLMFVASYLTFMTIGGFPSFVEDMKVF  170 (392)
Q Consensus        98 R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~-~~~--~~~---~-~~~~g~l~~~~~~~~~~~~~~~~~~~~er~~~  170 (392)
                      |+++..+|||..+...+++|+++.+++|.++... +.+  ..+   . +-..|.+.+.....+... .......+|+..+
T Consensus         1 re~~~~~r~~~~~~~~l~~Pl~~~~~~~~~~~~~~~~~~~~~g~~y~~fl~~G~~~~~~~~~~~~~-~~~~~~~~~~g~~   79 (236)
T TIGR01247         1 RELKRFIRSRSRIVGSILNPLLWLIFFGKGWSGAFRFPMIFGGVDYMTYLVPGIVAMTVFNMSFFS-GISVIWDRQFGFL   79 (236)
T ss_pred             CchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCcHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhCHH
Confidence            6788899999999999999999999999987543 111  111   1 112233333222222111 1111222344455


Q ss_pred             HHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Q 016275          171 ERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLT  250 (392)
Q Consensus       171 ~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~  250 (392)
                      +|-..++. +...|+++|.+.+++..+++.++...+.+++.+.+.  ..+...++..++..++..++|.+++...++.+.
T Consensus        80 ~~~~~~P~-~~~~~~l~~~l~~~~~~~~~~~i~~~i~~~~~~~~~--~~~~~~~~~~~l~~~~~~~lg~~l~~~~~~~~~  156 (236)
T TIGR01247        80 KEILVAPA-SRVEMIVGRILGGSTVAMIQGAIILALSFIVAILKP--SGVIPTLVLAFIVGVALSGLGVAIAARMDSMEG  156 (236)
T ss_pred             HHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence            55555555 899999999999999999999888888887766553  344445555666777889999999999999998


Q ss_pred             HHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccccCchhH
Q 016275          251 GIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKW  330 (392)
Q Consensus       251 a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~  330 (392)
                      +..+.+.+..++.++||.++|.+.+|+  |.+|+.+++|.+|+.|++......+.                  ... +.+
T Consensus       157 ~~~i~~~~~~~l~~lsG~~~P~~~~P~--~~~~i~~~~P~~~~~~~~r~~~~~~~------------------~~~-~~~  215 (236)
T TIGR01247       157 FQIIMSMLMLPMFFLSGAFYPITTMPA--WMQGLAKINPLTYAVDGARYYLAGVS------------------PTF-PLE  215 (236)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCHHhCHH--HHHHHHHHCcHHHHHHHHHHHHhCCC------------------ccc-chH
Confidence            888999999999999999999999998  66779999999999999764332211                  012 367


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 016275          331 VDLAILFGMVVFYRLVFLG  349 (392)
Q Consensus       331 ~~~~iL~~~~v~~~~la~~  349 (392)
                      .++++|+++.+++.+++..
T Consensus       216 ~~~~~l~~~~~~~~~l~~~  234 (236)
T TIGR01247       216 QDLLVLTLLAVIFVGIAAV  234 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8899999999999888754

This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.

>TIGR00025 Mtu_efflux ABC transporter efflux protein, DrrB family

Probab=99.72  E-value=6e-16  Score=140.62  Aligned_cols=225  Identities=11%  Similarity=0.025  Sum_probs=150.8

Q ss_pred             hcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHhhCCCCchH
Q 016275          104 YRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQA-RGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGAT  182 (392)
Q Consensus       104 ~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~er~~~~rE~~~g~Y~~~  182 (392)
                      +|||..+...+.+|+++.++++.++.+.. +....+. ..+.+-+..+..+....+..-...+|+..++|-+.++. +..
T Consensus         2 ~r~p~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~er~~G~l~rl~~~P~-~~~   79 (232)
T TIGR00025         2 LRVGAQIILTMFIPITFMVGLNLLPGGSV-THNRGATFIPVLMALAAISTAFTGQAIAVARDRRYGALKRLGATPL-PRL   79 (232)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcCCcc-CCcchhHhhHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHhcCCC-cHH
Confidence            69999999999999999999998886531 1112211 22322222222111111111122334446667777766 999


Q ss_pred             HHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---chHHHHHHHHHHH
Q 016275          183 AFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVP---NYLTGIITGAGIQ  259 (392)
Q Consensus       183 ~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~---~~~~a~~~~~~~~  259 (392)
                      .|+++|.+...+..+++..++. +.+++.|++.... ....++...+....+.+++.+++.+.+   +.+.+..+.+.+.
T Consensus        80 ~~l~g~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~~  157 (232)
T TIGR00025        80 GILAGRSLAVVARVFLQTLILL-VIGFVLGFRFAGG-ALTALTLGAVIIALGTALFAALGLVAGGTLQAEIVLAVANLVW  157 (232)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence            9999999888888877766555 4455778875433 233334444444555666666666654   4455577888888


Q ss_pred             HHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccccCchhHHHHHHHHHH
Q 016275          260 GLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGM  339 (392)
Q Consensus       260 ~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~iL~~~  339 (392)
                      ++++++||.++|.+.+|+  |.+|+.+++|++|+.+++......+.                  +.. ..+.++++++++
T Consensus       158 ~p~~~lSG~~~P~~~mP~--~lq~i~~~~P~t~~~~~~r~~~~~~~------------------~~~-~~~~~~~~l~~~  216 (232)
T TIGR00025       158 FIFALLSAGLVPLNLIPT--WIKWFVRVQPSSYATEALRQAATVSV------------------DTF-GAVRDLVVVLAF  216 (232)
T ss_pred             HHHHHHhheeeecccccH--HHHHHHHhCcHHHHHHHHHHHHcCCC------------------Chh-hHHHHHHHHHHH
Confidence            999999999999999998  77889999999999999865543221                  111 268888899999


Q ss_pred             HHHHHHHHHHHHHH
Q 016275          340 VVFYRLVFLGIIKT  353 (392)
Q Consensus       340 ~v~~~~la~~~l~~  353 (392)
                      .+++..++....|+
T Consensus       217 ~~v~~~la~~~~~r  230 (232)
T TIGR00025       217 WVALAALAAIRLRR  230 (232)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99888888765543

This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.

>TIGR03861 phenyl_ABC_PedC alcohol ABC transporter, permease protein

Probab=99.72  E-value=1.3e-15  Score=140.25  Aligned_cols=236  Identities=11%  Similarity=0.040  Sum_probs=168.1

Q ss_pred             HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccC-CC------C---hhhHHHHHHHHHHHHHHHHHHhhcC
Q 016275           90 TQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNL-GT------D---NNSIQARGSLLMFVASYLTFMTIGG  159 (392)
Q Consensus        90 ~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~-~~------~---~~~~~~~~g~l~~~~~~~~~~~~~~  159 (392)
                      ++++.+++|+++.+.|||..+...+++|+++.+++|.+|... +.      +   ....+-..|++.+......+.+ +.
T Consensus         2 ~~~~~l~~rel~~~~r~~~~~~~~ll~Pl~~l~~f~~~f~~~~~~~~~~~~~~~~~y~~fl~pGi~~~~~~~~~~~~-~~   80 (253)
T TIGR03861         2 ICFNGIVLREALRFVQQRSRFLSALVRPLLWLLVFAAGFRAALGISIIEPYDTYITYEVYIVPGLCCMILLFNGMQS-SL   80 (253)
T ss_pred             hHHHHHHHHHHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHh-hh
Confidence            578999999999999999999999999999999999988543 11      1   0111222344433333222221 11


Q ss_pred             CchhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 016275          160 FPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMM  239 (392)
Q Consensus       160 ~~~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~  239 (392)
                      .....+|+....+-+.... +...+.+++.+..+...+++.++...+.+ +.|.+.+...+......+++..++..++|+
T Consensus        81 ~~~~~r~~g~~~~l~~~p~-~~~~~~l~~~l~~~~~~~~~~~i~~~~~~-~~g~~~~~~~~l~~~~~~~l~~~~~~~lgl  158 (253)
T TIGR03861        81 SMVYDREMGSMRVLLTSPL-PRPFLLFCKLLASALISLLQVYAFLAIAA-LVGVQPPVWGYVSVLPALVLVAFMLGALGL  158 (253)
T ss_pred             HhHHhHhcCHHHHHhhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            1123344446666666666 88889999999998888887766555554 346655444444444555667777889999


Q ss_pred             HHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCC---CccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHH
Q 016275          240 IVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDL---PHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQV  316 (392)
Q Consensus       240 ~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~i---P~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~  316 (392)
                      ++|.++++.+.+..+.+.++.+++++||.+.|.+.+   |+  |.+|+.++||++|..|++...-. |            
T Consensus       159 ~la~l~~~~~~~~~i~~~~~~~l~flSgi~~p~~~~~~~p~--~l~~i~~~nPl~~~i~~~R~~~~-g------------  223 (253)
T TIGR03861       159 ALSNLIRQLENFAGVMNFVIFPMFFLSSALYPLWKMQEAST--WLYWICALNPFTHAVELVRFALY-G------------  223 (253)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHhhHhhhhhhcccccH--HHHHHHHhCcHHHHHHHHHHHHh-C------------
Confidence            999999998888888888999999999999999877   65  77779999999999999854321 1            


Q ss_pred             HHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016275          317 LRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKT  353 (392)
Q Consensus       317 l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~  353 (392)
                             +  . .|.+++++.++.+++..++....|+
T Consensus       224 -------~--~-~~~~~~~~~~~~~v~~~~~~~~fr~  250 (253)
T TIGR03861       224 -------Q--L-NLPALGWTLGATTLFTLLAFWGFDP  250 (253)
T ss_pred             -------C--c-chhHHHHHHHHHHHHHHHHHHHhhc
Confidence                   1  1 3556677788888888888766553

Members of this protein family, part of a larger class of efflux-type ABC transport permease proteins, are found exclusively in genomic contexts with pyrroloquinoline-quinone (PQQ) biosynthesis enzymes and/or PQQ-dependent alcohol dehydrogenases, such as the phenylethanol dehydrogenase PedE of Pseudomonas putida U. Members include PedC, an apparent phenylethanol transport protein whose suggested role is efflux to limit intracellular concentrations of toxic metabolites during phenylethanol catalysis.

>PRK15066 inner membrane transport permease; Provisional

Probab=99.66  E-value=3.3e-14  Score=131.23  Aligned_cols=243  Identities=12%  Similarity=0.077  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHHhhcChhH-HHHHHHHHHHHHHHHHHhhccC-CC--Chhh-HHHHHHHHHHHHHHHHHHhhcCCchh
Q 016275           89 LTQCIVLTSRSFVNMYRDLGY-YWFRLGVYVLLGIGLATVFSNL-GT--DNNS-IQARGSLLMFVASYLTFMTIGGFPSF  163 (392)
Q Consensus        89 ~~q~~~l~~R~~~~~~R~~~~-~~~~~~~~~~~~ll~G~~f~~~-~~--~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~  163 (392)
                      ++-++.+.+|+++.+.||+.. +..-++++.++.+++|..+... +.  +.+. .+-..|++.+.....+...  +...+
T Consensus         7 ~~~~~~l~~re~~~~~r~~~~~ll~pli~~~~~~~vfg~~~~~~~~~~~~~~y~~fl~pGll~~~~~~~~~~~--~~~~i   84 (257)
T PRK15066          7 WIALKTIVRKEIRRFLRIWVQTLVPPVITMTLYFLIFGNLIGSRIGEMGGFSYMQFIVPGLIMMSVITNSYSN--VASSF   84 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence            567889999999999999854 4555566667777777666432 11  1111 1122244433322222111  11222


Q ss_pred             hHHH--HHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016275          164 VEDM--KVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIV  241 (392)
Q Consensus       164 ~~er--~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i  241 (392)
                      .++|  ...+|-..+.. +...+.+++.+......+++.++...+.+...|.+..  ........+++........|.++
T Consensus        85 ~~~~~~~~~~~l~vtp~-~~~~~~~~~il~~~~~~~~~~~iil~i~~~~~~~~~~--~~~~~l~~~ll~~~~f~~~gl~~  161 (257)
T PRK15066         85 FSAKFQRNIEELLVSPV-PNHVIILGYVGGGVARGLCVGILVTLISLFFVPLQVH--HWGIVLLTVLLTAILFSLGGLIN  161 (257)
T ss_pred             HHHHHhhhHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            2232  23333344554 8889999999988877777766666565554566532  23333333334344444558888


Q ss_pred             HHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhh
Q 016275          242 ASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKW  321 (392)
Q Consensus       242 ~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~  321 (392)
                      +...++.+....+.+.++.|++++||.++|.+++|+  |.+++.++||++|..|++...-+.+                 
T Consensus       162 a~~~~~~~~~~~i~~~~~~pl~flSgi~~p~~~lP~--~l~~i~~~nPlt~~v~~~R~~~~g~-----------------  222 (257)
T PRK15066        162 AVFAKSFDDISIIPTFVLTPLTYLGGVFYSISLLPP--FWQGVSKLNPIVYMVNAFRYGFLGI-----------------  222 (257)
T ss_pred             HHHHccHHHHHHHHHHHHHHHHHHcchhccHHhChH--HHHHHHHHCcHHHHHHHHHHHHcCC-----------------
Confidence            888888888888889999999999999999999998  7788999999999999996543211                 


Q ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016275          322 QLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMK  358 (392)
Q Consensus       322 ~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~  358 (392)
                        + +...|.++++++++.+++..++...+|++++.|
T Consensus       223 --~-~~~~~~~l~~l~~~~~v~~~la~~~~~r~~~~~  256 (257)
T PRK15066        223 --S-DVPLWLAFAVLLVFIVVLYLLAWYLLERGRGLR  256 (257)
T ss_pred             --C-CccHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence              1 112688899999999999999988888766554

>TIGR03062 pip_yhgE_Cterm YhgE/Pip C-terminal domain

Probab=99.57  E-value=3.4e-14  Score=126.85  Aligned_cols=155  Identities=13%  Similarity=0.038  Sum_probs=126.0

Q ss_pred             hhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Q 016275          174 RLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGII  253 (392)
Q Consensus       174 ~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~  253 (392)
                      +.+.. +.+.++++|.+..++..++++++...+.+++.|++..  ++..+++.+++..+++.++|.+++..+++...+  
T Consensus        53 ~~~p~-~~~~~~~~k~~~~~~~~~~~~~~~~~i~~~~~g~~~~--~~~~~~l~~~l~~~~~~~lg~~l~~~~~~~~~~--  127 (208)
T TIGR03062        53 LPKSA-RSWRIALAKLLPGGLIGVLQAIILYGVLILGLGLDPA--HPPATFGFAILTSLTFMAIIQFLVALFGNVGRF--  127 (208)
T ss_pred             cccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHH--
Confidence            33443 7788899999999999999999999999988898753  567788888889999999999999998876543  


Q ss_pred             HHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccccCchhHHHH
Q 016275          254 TGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDL  333 (392)
Q Consensus       254 ~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~  333 (392)
                      .....+.+.++++|.++|.+.+|+  |.+|+++++|++|+.+++....+.+                   + ....|.++
T Consensus       128 ~~~~~~~~~~~~sG~~~P~~~~P~--~~~~i~~~~P~t~~~~~~r~~~~~~-------------------~-~~~~~~~~  185 (208)
T TIGR03062       128 LALVLLVLQLGSSGGTFPIELLPA--FFQAIHPFLPMTYSVNGLRQLISGG-------------------N-DGTLWQAV  185 (208)
T ss_pred             HHHHHHHHHHccCCCccchhhCHH--HHHHhhhhCcHHHHHHHHHHHHhCC-------------------c-HHHHHHHH
Confidence            344445677778999999999998  7778999999999999997665433                   1 12378899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Q 016275          334 AILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       334 ~iL~~~~v~~~~la~~~l~~~~  355 (392)
                      ++|+++.+++.+++....|+++
T Consensus       186 ~~L~~~~~v~~~la~~~~~~~~  207 (208)
T TIGR03062       186 AVLLLILVVFLALSLLSARRKR  207 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999988777655

This family contains the C-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03061, represents the conserved N-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.

>TIGR01248 drrC daunorubicin resistance protein C

Probab=99.29  E-value=2.6e-11  Score=102.47  Aligned_cols=132  Identities=11%  Similarity=0.024  Sum_probs=103.4

Q ss_pred             hhhHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHH---HHHHHHHHHHHHHHHHH
Q 016275          162 SFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFI---YFVLLLFACMLLVESLM  238 (392)
Q Consensus       162 ~~~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~---~~~l~~~l~~~~~~~~g  238 (392)
                      ...+|+..++|-+.++. ++..++++|.+......+++..+...+.+ +.|++.+. .+.   .++++..+.......+|
T Consensus        13 ~~dr~~G~~~~l~~tP~-~~~~~~~g~~l~~~~~~~~~~~ii~~v~~-~~g~~~~~-~~~~~~~~~~~~~l~~~~f~~l~   89 (152)
T TIGR01248        13 TIDREIGLLSRLWVLPI-HRASALLARIIAETIRAFIGTILILAIAL-ALGFRFRN-GVAAALLFLLIPSIFGIAFAALV   89 (152)
T ss_pred             HHHHHhHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567778889998888 99999999999999999999988888885 45887653 333   33333344556666777


Q ss_pred             HHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHh
Q 016275          239 MIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFK  299 (392)
Q Consensus       239 ~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~  299 (392)
                      ..++...++.+. ....+.+.+|+.++||.++|.+++|+  |.+++.+++|++|+.|++..
T Consensus        90 ~~~a~~~~~~~~-~~~~~~v~~pl~flsg~~~P~~~mP~--wlq~ia~~~Plt~~~~~~R~  147 (152)
T TIGR01248        90 MAMALRKEGRFA-MEALELAQAAAAFLNPGATPIKLFPD--WAQPLIAHQPISPAIEACAD  147 (152)
T ss_pred             HHHHHHcCCHHH-HHHHHHHHHHHHHHhhhhcCHHhCcH--HHHHHHhhCCccHHHHHHHH
Confidence            777666666554 43457788999999999999999998  89999999999999999864

The model describes daunorubicin resistance protein C in bacteria. This protein confers the function of daunorubicin resistance. The protein seems to share strong sequence similarity to UvrA proteins, which are involved in excision repair of DNA. Disruption of drrC gene showed increased sensitivity upon exposure to duanorubicin. However it failed to complement uvrA mutants to exposure to UV irradiation. The mechanism on how it confers duanomycin resistance is unclear, but has been suggested to be different from DrrA and DrrB which are antiporters.

>COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms]

Probab=99.27  E-value=4e-10  Score=104.72  Aligned_cols=169  Identities=19%  Similarity=0.252  Sum_probs=124.4

Q ss_pred             HHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHH-H
Q 016275          165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVA-S  243 (392)
Q Consensus       165 ~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~-~  243 (392)
                      +++..+.|-..++. +...+++++.+.......+...+...+..++.|.. ....+.....++.+......++|.+++ .
T Consensus       115 ~~~g~~~~~~~sp~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~lg~~~~~~  192 (286)
T COG0842         115 REFGTLERLLVSPV-SRLFILLGKIVPYLVVASLIAGLVLLVIAFLLGVP-FLGSLLLLLLLLLLLLLATVALGLLLSTF  192 (286)
T ss_pred             HhhCcHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555666666666 43556666666666555555555555666667743 334566666777777788888888666 3


Q ss_pred             hccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhcc
Q 016275          244 LVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQL  323 (392)
Q Consensus       244 ~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~  323 (392)
                      ..++.+.+....+.+..++.+++|.++|.+.+|+  |.+++.+++|.+|+.+++......+..                 
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~g~~~p~~~~p~--~~~~i~~~~P~t~~~~~~~~~~~~~~~-----------------  253 (286)
T COG0842         193 AKSQLQCASAVGNLLILPLGFLSGVFFPLELLPA--WLQGISYINPLTYAIDALRYVYLGGWR-----------------  253 (286)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHccccCchhhhHH--HHHHHHHHccHHHHHHHHHHHHhCCCc-----------------
Confidence            5566788888888999999999999999999998  788899999999999999665543311                 


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016275          324 QMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEK  356 (392)
Q Consensus       324 ~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~  356 (392)
                        ..+.+.++++++++.+++.+++...+|++++
T Consensus       254 --~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~  284 (286)
T COG0842         254 --NDGIWISLLILLLFAVVFLLLGLLLLRRRRK  284 (286)
T ss_pred             --hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence              1127889999999999999999888887654

>COG1682 TagG ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]

Probab=98.95  E-value=1.7e-07  Score=85.98  Aligned_cols=237  Identities=16%  Similarity=0.107  Sum_probs=146.7

Q ss_pred             HHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHhhccCCCC---hhhHHHHHHHHHHHHHHHHHHhhcCCchhh
Q 016275           89 LTQCIVLTSRSFVNMYRD-LGYYWFRLGVYVLLGIGLATVFSNLGTD---NNSIQARGSLLMFVASYLTFMTIGGFPSFV  164 (392)
Q Consensus        89 ~~q~~~l~~R~~~~~~R~-~~~~~~~~~~~~~~~ll~G~~f~~~~~~---~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  164 (392)
                      +...+.|.+|+++...|+ .-...-.++.|.++.++++.+|...-..   .--.+-..|++.......+  ...+...+.
T Consensus        17 ~~li~~L~~~eik~Ryr~s~LG~~W~~l~P~~~~~~~~~vf~~l~~~~~~~~~~~l~~G~~~w~f~~~~--i~~~~~s~~   94 (263)
T COG1682          17 RRLIGALVKREIKTRYRRSVLGYLWSLLNPLLMILVYTLVFGALLRSPGLNFLAYLLAGLILWFFFSEA--ISEGAGSVV   94 (263)
T ss_pred             HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH--HHhHHHHhh
Confidence            455677889999965554 4445556777777777777777654221   1112222333321111000  001222333


Q ss_pred             HHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016275          165 EDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASL  244 (392)
Q Consensus       165 ~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~  244 (392)
                      .+..+++|-+    .++..+.+++++.++....+..++.....-+ .|..+ ..++......+.+..+.+.++|+++|.+
T Consensus        95 ~n~~li~k~~----~p~~~~~~~~~~~~~~~~~i~~iiil~~~i~-~~~~~-s~~~l~~~~~l~~l~l~~~g~~l~~a~l  168 (263)
T COG1682          95 ANAALIKKIN----FPPLILPVARTLSRLFNFLIHLIIILIFLII-LGVEP-SWHWLLLLPALLLLILFSVGLGLILASL  168 (263)
T ss_pred             hhHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            3444444332    2788899999999987777666555544443 33333 3455555566666677777888888877


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccc
Q 016275          245 VPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQ  324 (392)
Q Consensus       245 ~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~  324 (392)
                      .....--..+...++.+++..+|.++|.+.+|+ .++ ++.++||+.+.+|.....-+.+...                 
T Consensus       169 ~v~fRD~~~i~~~v~~~~f~~sPIi~~~~~~p~-~~~-~~~~~NP~~~iie~~R~~~~~~~~~-----------------  229 (263)
T COG1682         169 GVRFRDLGQILGVVLQLLFFLSPIIYPVSNLPE-QLR-ELVLLNPLTHIIESFRAPLLGGDVP-----------------  229 (263)
T ss_pred             hhhcccHHHHHHHHHHHHHHhCceeeehhhccH-HHH-HHHHHCcHHHHHHHHHHHHhCCCcc-----------------
Confidence            665554555667778889999999999999998 454 4999999999999997776544211                 


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016275          325 MGYSKWVDLAILFGMVVFYRLVFLGIIKTVEK  356 (392)
Q Consensus       325 ~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~  356 (392)
                          .+.+.....++.++..++++...++.+|
T Consensus       230 ----~~~~~~~~~~~~li~l~vg~~~~~~~~~  257 (263)
T COG1682         230 ----DLHLLVYILLLTLILLFVGLLLFRKFRK  257 (263)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                2344445556666666667666665543

>TIGR03518 ABC_perm_GldF gliding motility-associated ABC transporter permease protein GldF

Probab=98.84  E-value=1e-06  Score=80.29  Aligned_cols=219  Identities=15%  Similarity=0.116  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhcc---CCCChhhHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHH
Q 016275           93 IVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSN---LGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKV  169 (392)
Q Consensus        93 ~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~---~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~er~~  169 (392)
                      +.+.+|+++.+.|+|.....-.+..++.|+.......+   ...+..+.....+...+.  ........++       ..
T Consensus         2 ~~i~~kEl~~~f~sp~~yv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~p~l~~-------~~   72 (240)
T TIGR03518         2 KAIFKKEFNSFFSSPIGYLVIAVFLLANGLFLWVFPGDFNILDYGYADLTPFFSLAPWV--FLFLIPAITM-------RS   72 (240)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhHHhcCcchHHHHHHHHHHH--HHHHHHHHHH-------HH
Confidence            46889999999999998877777766666443221111   111122222222221111  1111111122       33


Q ss_pred             HHHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhh---hhchheeeccccc---cchhhHHHHHHHHHHHHHHHH
Q 016275          170 FERERLNGH--------YGATAFVFGNTFSALPYLALISL---IPGAIVYYLPGLH---EGYQHFIYFVLLLFACMLLVE  235 (392)
Q Consensus       170 ~~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~---i~~~i~y~l~g~~---~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      +.+||++|.        -+...++++|.++.+...++..+   ++.... ...|.+   .+.+.+....+..++.+.+..
T Consensus        73 ia~Er~~GTle~Llt~Pvs~~~ivlgK~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  151 (240)
T TIGR03518        73 FAEERKLGTLELLLTRPISDWQIILGKYLGSLTLVILALLPTLLYVFTI-YQLGNPVGNLDIGSTFGSYIGLLLLGSVYT  151 (240)
T ss_pred             HHHHHHcCHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence            445555554        38899999999998755443332   111111 112222   245555555666677777889


Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCC--CccccccccccccHHHHHHHHhHhhhcCCCccCCCCCH
Q 016275          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDL--PHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDG  313 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~i--P~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g  313 (392)
                      ++|.++|++.++...|..++..+...+  +.|... ..++  |+  |.+|+.++||.+|..+..     +|.        
T Consensus       152 aig~~iSsl~~~q~~a~~~~~~~~~~l--~~~~~~-l~~~~~~~--~~~~l~~~sp~~~~~~~~-----~g~--------  213 (240)
T TIGR03518       152 AIGLFASSLTENQIVAFIIAVFLCFLF--YFGFDG-LASLLWGG--SAYTISELGLSYHYESIS-----RGV--------  213 (240)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHHH--HHHHHH-Hhhhcchh--HHHHHHHcCHHHHHHHHH-----cCc--------
Confidence            999999999988877765554433222  222221 2334  55  667799999987765544     110        


Q ss_pred             HHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016275          314 EQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKT  353 (392)
Q Consensus       314 ~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~  353 (392)
                               +     .+.++...+.+.+++..++...+++
T Consensus       214 ---------i-----~~~~~v~~~~~~~~~l~l~~~~~~~  239 (240)
T TIGR03518       214 ---------I-----DSRDVIYFLSITVLFLALTKLQLKS  239 (240)
T ss_pred             ---------c-----cHhHHHHHHHHHHHHHHHHHHHHhc
Confidence                     0     2566777788888888888776654

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.

>PF12679 ABC2_membrane_2: ABC-2 family transporter protein

Probab=98.62  E-value=5.2e-06  Score=77.15  Aligned_cols=169  Identities=15%  Similarity=0.227  Sum_probs=95.5

Q ss_pred             HHHHHHhhCCC--------CchHHHHHHHHHHHhhHHH---HHhhhhch---heeeccccccchhhHHHHHHHHHHHHH-
Q 016275          168 KVFERERLNGH--------YGATAFVFGNTFSALPYLA---LISLIPGA---IVYYLPGLHEGYQHFIYFVLLLFACML-  232 (392)
Q Consensus       168 ~~~~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~---~~~~i~~~---i~y~l~g~~~~~~~f~~~~l~~~l~~~-  232 (392)
                      ..+.+|+++|.        +++..++++|.+......+   +...+...   ......|.+.+...+....+...+..+ 
T Consensus        88 ~~ia~E~e~gTi~~lls~PisR~~i~~gK~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (277)
T PF12679_consen   88 DLIAGERERGTIELLLSKPISRSEILLGKFLAAILFSLLLLIALLVGYLLTLVLIAISGIPIDLSSFLLLLLLFVLLLLA  167 (277)
T ss_pred             HHHHhccccCEeeHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence            35667776665        5899999999999887632   22111111   111124555555555554444443433 


Q ss_pred             --HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhccccc-CCCCCCccccc--cccccccHHHHHHHHhHhhhcCCCcc
Q 016275          233 --LVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFR-LPNDLPHPFWK--YPLYYIAFHKYAYQGMFKNEFEGLKF  307 (392)
Q Consensus       233 --~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~-~~~~iP~~~w~--~~l~~lsp~~y~~~al~~~~~~~~~~  307 (392)
                        +..+++.++|+++++...|...+..+.....+...... ..++....-|.  ..+.+++|..+..... .....+.  
T Consensus       168 ~~~~~sl~~~~S~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~--  244 (277)
T PF12679_consen  168 VLVFISLGLLISSLFRSSASAILASLGLLFLLFFLYPIIVFSIANSEALPWVISPNLSFLSPFSPFNLLI-GSILGGG--  244 (277)
T ss_pred             HHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHhHHHHcChHHHHHHHH-HHhhccc--
Confidence              45899999999999888777776665544433333321 11111110011  1146677765432222 1211110  


Q ss_pred             CCCCCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          308 DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       308 ~~~~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                                      +.....|.++++++++.+++.++++..+++|+
T Consensus       245 ----------------~~~~~~~~~~~~~~~~~~v~l~la~~~F~rrD  276 (277)
T PF12679_consen  245 ----------------FVWLSTWPSLLILLAYTLVFLALAYYRFQRRD  276 (277)
T ss_pred             ----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence                            00023788999999999999999997776553

>PRK15176 Vi polysaccharide export inner membrane protein VexB; Provisional

Probab=98.60  E-value=6.6e-06  Score=75.93  Aligned_cols=105  Identities=15%  Similarity=0.048  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCcc
Q 016275          228 FACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF  307 (392)
Q Consensus       228 ~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~  307 (392)
                      ++..+.+.++|+++|.+..-..-...+...++.+++..||.+.|.+.+|+  +.+++.+.||+.+.+|+....-+.+.. 
T Consensus       156 ll~~l~~~glglils~l~v~~rDi~~i~~~~l~~lf~~SpI~y~~~~vp~--~~~~il~~NPl~~~ie~~R~~~~~~~~-  232 (264)
T PRK15176        156 VIAWLLGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPY--SLLSIFSWNPLLHANEIVREGMFEGYH-  232 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHhhHhhhHHhCcH--HHHHHHHHCcHHHHHHHHHHHHhcCcC-
Confidence            33445555777776655433333444556677888999999999999998  334488999999999999776654421 


Q ss_pred             CCCCCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          308 DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       308 ~~~~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                                       .   .+.+.....++.++..++++...|+.+
T Consensus       233 -----------------~---~~~~~~~~~~~~~~~l~~G~~~~~~~~  260 (264)
T PRK15176        233 -----------------S---LYLEPFYPLAFSATLFLAGLIFHLICD  260 (264)
T ss_pred             -----------------c---cccChHHHHHHHHHHHHHHHHHHHHHH
Confidence                             0   122335666777777777777666543

>PF12698 ABC2_membrane_3: ABC-2 family transporter protein; PDB: 2P0S_B 3CNI_A

Probab=98.48  E-value=2.5e-08  Score=94.91  Aligned_cols=156  Identities=23%  Similarity=0.241  Sum_probs=0.0

Q ss_pred             hHHHH--HHHHHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccc---cccchhhHHHHHHHHHHHHHHHHHHH
Q 016275          164 VEDMK--VFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPG---LHEGYQHFIYFVLLLFACMLLVESLM  238 (392)
Q Consensus       164 ~~er~--~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g---~~~~~~~f~~~~l~~~l~~~~~~~~g  238 (392)
                      .+||.  +..|-+.+|. +...|++++.+..+...++..++...+   +.|   ++..  ++...++.+++..++..+++
T Consensus       183 ~~ek~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~i~~~i~~~i---~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~  256 (344)
T PF12698_consen  183 VEEKESGTRERLLSSGV-SPWSYWLSKFLAYFLVSLIQSLIIIII---IFGISGIPFG--NFLLLLLLLLLFSLAFISFG  256 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhHhhhhhhHhhhcccC-CHHHHHHHHHHHHhhHHHHHHHHHHHH---HhccccCccc--chHHHHHHHHHHHHHHHHHH
Confidence            44544  4555557776 999999999999999988888776654   445   4433  55556677888889999999


Q ss_pred             HHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHH
Q 016275          239 MIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLR  318 (392)
Q Consensus       239 ~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~  318 (392)
                      .+++.++++...+..+..++.++...++|.++|.+++|+  +.+++.++.|.+|..+++....+                
T Consensus       257 ~~is~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~P~~~~~~~~~~~~~----------------  318 (344)
T PF12698_consen  257 FLISSFFKNSSTAISVASIIILLLSFLSGGFFPLSSLPS--FLQWISSFLPFYWFIQGLRNIIY----------------  318 (344)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhHH--HHHHHHHHhhHHHHHHHHHHHHH----------------
Confidence            999999999988888877777767777888888889998  55669999999999888754431                


Q ss_pred             hhhccccCchhHHHHHHHHHHHHHHHHHHH
Q 016275          319 DKWQLQMGYSKWVDLAILFGMVVFYRLVFL  348 (392)
Q Consensus       319 ~~~~~~~~~~~~~~~~iL~~~~v~~~~la~  348 (392)
                         |.  ..+.+.++++++++.+++.+++.
T Consensus       319 ---~~--~~~~~~~~~~l~~~~~v~~~l~~  343 (344)
T PF12698_consen  319 ---GD--WSEIWISLIILLLFAVVYLLLAI  343 (344)
T ss_dssp             ------------------------------
T ss_pred             ---hc--HHHHHHHHHHHHHHHHHHHHHHh
Confidence               11  11266788888888888877664

>PF03379 CcmB: CcmB protein; InterPro: IPR003544 Within mitochondria and bacteria, a family of related proteins is involved in the assembly of periplasmic c-type cytochromes: these include CycK [], CcmF [,], NrfE [] and CcbS []

Probab=98.19  E-value=7.8e-05  Score=66.64  Aligned_cols=157  Identities=17%  Similarity=0.174  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhH-HHHHHHHHHHHHHHHHHhhcCCchhhHHHHHH
Q 016275           92 CIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSI-QARGSLLMFVASYLTFMTIGGFPSFVEDMKVF  170 (392)
Q Consensus        92 ~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~er~~~  170 (392)
                      ++.+++|+++.-+|++.....-+...+....++...+   +.+.+.. +...|++..+..+....+.+         ..|
T Consensus         1 ~~~l~~kdl~le~r~~~~~~~~~lf~l~~i~if~~al---~~~~~~l~~~~~gllWi~~lfa~~l~~~---------r~f   68 (215)
T PF03379_consen    1 FLALFRKDLRLEFRSKEGLLSMLLFFLLVIVIFSFAL---GPDPDLLARVAPGLLWIALLFASLLGLN---------RSF   68 (215)
T ss_pred             CHHHHHHHHHHHHccccchHHHHHHHHHHHHHHHhhc---CCchhHHHHHhHHHHHHHHHHHHHHHhh---------HhH
Confidence            4678999999999999887766666666655555443   3332222 33446666554444433322         457


Q ss_pred             HHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016275          171 ERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVA  242 (392)
Q Consensus       171 ~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~  242 (392)
                      .+|+++|.        .++..++++|.+.......+..++...+...+.|.+.  ..+..+.+.+.+.+.....+|.+.+
T Consensus        69 ~~E~e~G~L~~l~l~~~~~~~i~l~K~l~~~~~~~~~~~i~~pl~~~l~~~~~--~~~~~~~~~l~lgt~gl~~igtl~a  146 (215)
T PF03379_consen   69 AREYEDGTLEQLLLSPVPRSAIFLGKLLANWLLLFLPELIIFPLFALLFNLPI--SSWPLLLLSLLLGTLGLAAIGTLLA  146 (215)
T ss_pred             HHHHhCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            88888876        2577899999999987776666665555555667653  4555666666677777778888777


Q ss_pred             HhccchHHHHHHHHHHHHHH
Q 016275          243 SLVPNYLTGIITGAGIQGLM  262 (392)
Q Consensus       243 ~~~~~~~~a~~~~~~~~~~~  262 (392)
                      +++-+......+.++...|+
T Consensus       147 al~~~~r~~~~Ll~lL~lPl  166 (215)
T PF03379_consen  147 ALAAGARGREILLPLLLLPL  166 (215)
T ss_pred             HHHHhccccCHHHHHHHHHH
Confidence            66554444444555555544

These proteins may play a role in guidance of apocytochromes and haem groups for their covalent linkage by the cytochrome-c-haem lyase. Members of the family are probably integral membrane proteins, with up to 16 predicted transmembrane (TM) helices. The gene products of the hel and ccl loci have been shown to be required specifically for the biogenesis of c-type cytochromes in the Gram-negative photosynthetic bacterium Rhodobacter capsulatus []. Genetic and molecular analyses show that the hel locus contains at least 4 genes, helA, helB, helC and orf52. HelA is similar to the ABC transporters and helA, helB, and helC are proposed to encode an export complex []. It is believed that the hel-encoded proteins are required for the export of haem to the periplasm, where it is subsequently ligated to the c-type apocytochromes []. However, while CcmB and CcmC have the potential to interact with CcmA, the 3 gene products probably associating to form a complex with (CcmA)2-CcmB-CcmC stoichiometry, the substrate for the putative CcmABC-transporter is probably neither haem nor c-type apocytochromes []. Hydropathy analysis suggests the presence of 6 TM domains.; GO: 0015232 heme transporter activity, 0015886 heme transport, 0017004 cytochrome complex assembly, 0016020 membrane

>PF06422 PDR_CDR: CDR ABC transporter; InterPro: IPR010929 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=97.78  E-value=4.7e-05  Score=59.56  Aligned_cols=49  Identities=16%  Similarity=0.400  Sum_probs=43.6

Q ss_pred             CCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 016275          311 LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPV  360 (392)
Q Consensus       311 ~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~~~~~~  360 (392)
                      .+|++||+..++++.++ .|+|++|+++|+++|.++.++++.+.+..+..
T Consensus        31 V~G~~YL~~~y~y~~sh-~WRN~GIli~f~i~f~~~~~~~~e~~~~~~~~   79 (103)
T PF06422_consen   31 VSGDDYLEESYGYSYSH-RWRNFGILIAFWIFFIVLTLLATEFIKFEKSG   79 (103)
T ss_pred             EeHHHHHhhhccccccc-hhhhHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence            68999999768998886 99999999999999999999999988766653

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). In yeast, the PDR and CDR ABC transporters display extensive sequence homology, and confer resistance to several anti-fungal compounds by actively transporting their substrates out of the cell. These transporters have two homologous halves, each with an N-terminal intracellular hydrophilic region that contains an ATP-binding site, followed by a C-terminal membrane-associated region containing six transmembrane segments []. This entry represents a domain of the PDR/CDR ABC transporter comprising extracellular loop 3, transmembrane segment 6 and a linker region.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0016021 integral to membrane

>TIGR01190 ccmB heme exporter protein CcmB

Probab=97.70  E-value=0.0021  Score=56.92  Aligned_cols=153  Identities=12%  Similarity=0.082  Sum_probs=95.2

Q ss_pred             HHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHH-HHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHh
Q 016275           96 TSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQA-RGSLLMFVASYLTFMTIGGFPSFVEDMKVFERER  174 (392)
Q Consensus        96 ~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~er~~~~rE~  174 (392)
                      .+|+++.-+|++.....-++..++...++..-+   +.+.+..+. ..|++.....+....+.+         ..|.+|+
T Consensus         2 ~~kDl~l~~r~~~~~~~~llF~l~vi~lf~la~---gp~~~~l~~~apgilWva~lfa~ll~l~---------rlF~~d~   69 (211)
T TIGR01190         2 IRRDLRLAFRAGGGILNPLWFFLIVVTLFPFGV---GPELKLLSRIAPGIVWVGALLSSLLSLD---------RLFRDDF   69 (211)
T ss_pred             cHHHHHHHHcccchHHHHHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHHHHHHHHHHHHhh---------HHHHHHH
Confidence            589999999999877665655555555544433   333333333 346666555555444432         5778888


Q ss_pred             hCCC--------CchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016275          175 LNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVP  246 (392)
Q Consensus       175 ~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~  246 (392)
                      ++|.        .+....+++|.++......+...+...+.-.+.|++.  .....+.+.+.+.+.....+|.+.++++-
T Consensus        70 e~g~Le~lll~p~~~~~i~l~K~la~wl~~~l~~~l~~p~~~~~l~~~~--~~~~~l~l~LllGt~~Ls~igtl~aALt~  147 (211)
T TIGR01190        70 EDGSLDLLMLSPTPLELTVLAKVLAHWLVTGLPLVLLSPLLALLLNLDV--PAWGALALTLLLGTPALSFLGAIGAALTV  147 (211)
T ss_pred             hCCcHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8885        3778889999999876665555555544444667653  34455666777777777788887777655


Q ss_pred             chHHHHHHHHHHHHHH
Q 016275          247 NYLTGIITGAGIQGLM  262 (392)
Q Consensus       247 ~~~~a~~~~~~~~~~~  262 (392)
                      +......+.+++.+|+
T Consensus       148 g~r~~~~Ll~lL~lPl  163 (211)
T TIGR01190       148 GLKRGGLLLSLLVLPL  163 (211)
T ss_pred             hccCCchHHHHHHHHH
Confidence            4333333444444443

This model describes the cyt c biogenesis protein encoded by ccmB in bacteria. Bacterial c-type cytochromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome C.

>COG1277 NosY ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]

Probab=97.68  E-value=0.0038  Score=58.06  Aligned_cols=244  Identities=16%  Similarity=0.174  Sum_probs=137.1

Q ss_pred             HHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhc---cCCC-ChhhHHHHHHH---HHHHHHHHH-HHhhcCCch
Q 016275           91 QCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFS---NLGT-DNNSIQARGSL---LMFVASYLT-FMTIGGFPS  162 (392)
Q Consensus        91 q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~---~~~~-~~~~~~~~~g~---l~~~~~~~~-~~~~~~~~~  162 (392)
                      +...+.+++++...|+|.............++.....+.   .... .........+.   ......+.. +....+.  
T Consensus         3 ~~~~i~~~e~~~~~~s~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--   80 (278)
T COG1277           3 NILVIAQKEFQKYLRSKRFYILLAIFLLFAGIVLLLALKYLLILSKLLEGNPFLLLFLSSVSLVFSFFLPLLAILLGA--   80 (278)
T ss_pred             hhhHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcchhhhhhhhHHHHHHHHHHHHHHHHcc--
Confidence            477888999999999998877766444455555444442   1111 11000000011   100111111 1111222  


Q ss_pred             hhHHHHHHHHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhhhhc--h-heeecccccc---chhhHHHHHHHHH
Q 016275          163 FVEDMKVFERERLNGH--------YGATAFVFGNTFSALPYLALISLIPG--A-IVYYLPGLHE---GYQHFIYFVLLLF  228 (392)
Q Consensus       163 ~~~er~~~~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~--~-i~y~l~g~~~---~~~~f~~~~l~~~  228 (392)
                           .++.+|+++|.        .++.--+.||.+..+...++...+..  . ......|...   +......+....+
T Consensus        81 -----~~is~E~~~gTi~~Lls~PisR~~Iv~gK~i~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  155 (278)
T COG1277          81 -----DLISSEFESGTIKLLLSKPISRSNIVLGKFLGALLVILIIILISFISLLTLLLLFGFPGNVSSISRLLLFLGSSL  155 (278)
T ss_pred             -----chhhccCCcchHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence                 34566666665        47788889999888765554444443  1 2233334333   2234566777777


Q ss_pred             HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccC------CCCCCccccccccccccHHHHHHHHhHhhhc
Q 016275          229 ACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRL------PNDLPHPFWKYPLYYIAFHKYAYQGMFKNEF  302 (392)
Q Consensus       229 l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~------~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~  302 (392)
                      +...+..+++.+++...++...+...+..+.....+..+....      ....|   +...+...+|..+..+.......
T Consensus       156 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~  232 (278)
T COG1277         156 LYGLVLLSISLLISSLFSSSSLALLVSIILLLLFIIAFSLILLFISVLLIGIAP---TLNTLSLLLPLYLLAELAFTILL  232 (278)
T ss_pred             HHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh---hhHHHhccCHHHHHHHHhhhhcc
Confidence            8888889999999999998887777766655544433333211      11111   12226788888877777544433


Q ss_pred             CC-CccCCCCCHHHHHHhhhcccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          303 EG-LKFDNNLDGEQVLRDKWQLQM-GYSKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       303 ~~-~~~~~~~~g~~~l~~~~~~~~-~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                      .. ...    .+       .+... ....|.++.+++++.+++..++++..++|+
T Consensus       233 ~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~r~d  276 (278)
T COG1277         233 QSGFSD----SI-------LTLNESLLLAWFNILILIIYILIFLSIAYLIFKRRD  276 (278)
T ss_pred             cccccc----cc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            11 000    00       11111 113788999999999999999998887664

>COG4587 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=97.41  E-value=0.012  Score=52.37  Aligned_cols=239  Identities=15%  Similarity=0.082  Sum_probs=121.3

Q ss_pred             CHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChh-----hHHHHHHHHHHHHHHHHHHhhcCCc
Q 016275           87 DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNN-----SIQARGSLLMFVASYLTFMTIGGFP  161 (392)
Q Consensus        87 s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~-----~~~~~~g~l~~~~~~~~~~~~~~~~  161 (392)
                      .+++..+.+++-.+.....-+...+.-.+...+-+++.+.++-.+-++..     +..+..++.+.+-.....+...+.-
T Consensus         3 ~f~rky~~l~~v~~~~~~eYR~~~il~~l~~~l~~~l~~~lW~a~adss~~i~glt~~d~~~Y~~~~fvv~~lt~~~~~~   82 (268)
T COG4587           3 KFWRKYRVLLSVGLASMLEYRVNFILWRLSGLLPLILMGYLWVAVADSSPQINGLTPGDVARYFFATFVVRQLTTVWSIW   82 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666777777666665555555555555555555555545543322211     1233333333222222222222222


Q ss_pred             hhhHHHHHHHHHhhCCC-----CchHHHHHHHHHHHh--------hHHHHHhhhhchheeeccccccchhhHHHHHHHHH
Q 016275          162 SFVEDMKVFERERLNGH-----YGATAFVFGNTFSAL--------PYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLF  228 (392)
Q Consensus       162 ~~~~er~~~~rE~~~g~-----Y~~~~y~~a~~l~~l--------~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~  228 (392)
                      .       |.+|-..|.     -++..|.......+.        |..++-..++....-... .-.+......+.+.+.
T Consensus        83 e-------f~~eV~~G~l~~~LLrPld~l~~~~a~~~~~~~~~~lp~~~vL~lifa~l~~~~~-~~l~~~~l~~~~l~la  154 (268)
T COG4587          83 E-------FEKEVREGELSPRLLRPLDYLFHELAAHLGERASRGLPFLLVLLLIFALLYGAIL-QFLSPWTLYLFVLALA  154 (268)
T ss_pred             H-------HHHHHHcCeecHHhcCcccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhHHh-hcCCHHHHHHHHHHHH
Confidence            2       334433332     244455544444443        333332323221111001 1123333333333333


Q ss_pred             HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccC
Q 016275          229 ACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD  308 (392)
Q Consensus       229 l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~  308 (392)
                      +....-..+...+++.+=-.+.|+.+....-....++||.+.|++-.|+  |.+-+--..|+-|.+.-=           
T Consensus       155 ~~~~~~F~i~f~~~~~aFwt~~as~l~~~~~~l~~f~sG~l~PL~~fP~--~v~~il~ftPFpy~~y~P-----------  221 (268)
T COG4587         155 LLFLLRFLIQFTFGLFAFWTERASSLGKFWWLLYAFLSGSLAPLAFFPD--WVRAILAFTPFPYLLYTP-----------  221 (268)
T ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHhccccchHHhChH--HHHHHHHhCCchhhhccH-----------
Confidence            3333333444444443333456788888877888899999999999999  666566777777755321           


Q ss_pred             CCCCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016275          309 NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTV  354 (392)
Q Consensus       309 ~~~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~  354 (392)
                           ...+-..  .+.+ ..+.+.++.+++..++.++.-...|+.
T Consensus       222 -----~~llvGk--~s~~-~il~al~v~~~Wl~im~~l~~~lWrrg  259 (268)
T COG4587         222 -----VMLLVGK--YSGA-QILKALLVQIGWLLIMWLLSRWLWRRG  259 (268)
T ss_pred             -----HHHHhcc--ccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 1111110  1112 388899999999999988886655543

>PF12051 DUF3533: Protein of unknown function (DUF3533); InterPro: IPR022703 This transmembrane domain is functionally uncharacterised

Probab=96.99  E-value=0.024  Score=55.35  Aligned_cols=137  Identities=15%  Similarity=0.119  Sum_probs=88.2

Q ss_pred             chHHHHHHHHHHHhhHHHHHhhhhchheeecccccc--ch--hhHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 016275          180 GATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHE--GY--QHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITG  255 (392)
Q Consensus       180 ~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~--~~--~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~  255 (392)
                      +...+++-|.+......++.+++++.+. +..+++.  ..  ++|+.+|...++...+.....-.+..+.+..-  ..+.
T Consensus       240 ~~~~~~~~R~~~~~~~~~~~Sl~~~~v~-~af~~~~~~~~g~~gf~v~Wm~~~l~m~a~g~~~e~~~~~i~~~~--~~~~  316 (382)
T PF12051_consen  240 KPRHYLIYRWIISWIAYFFLSLFYSLVS-LAFQVDFTVAFGKGGFVVYWMFSWLYMSAVGLANENVISIIGPPF--MPFW  316 (382)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCccccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccch--HHHH
Confidence            8888899999988888888888888777 4555543  23  45888877766655433222222223333322  2222


Q ss_pred             HHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccccCchhHHHHHH
Q 016275          256 AGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAI  335 (392)
Q Consensus       256 ~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~i  335 (392)
                      .++.+.+.+.+ .+.|.+-.|. +++| .+-+ |++.+++++...-|++.+                    ....+++++
T Consensus       317 ll~wvi~nv~~-~~~P~el~p~-fyr~-gya~-P~~n~~~~~r~I~fd~~~--------------------~~lg~n~gi  372 (382)
T PF12051_consen  317 LLFWVILNVSS-TFYPLELSPG-FYRY-GYAM-PMHNIYEGLRVIFFDTCK--------------------GQLGRNYGI  372 (382)
T ss_pred             HHHHHHHhccc-ccCChhhCcc-HHHH-hhhh-hHHHHHHHHHHheeCCCc--------------------ccccchHHH
Confidence            22333444555 4569999998 7775 4444 999999999888665422                    137788899


Q ss_pred             HHHHHHHH
Q 016275          336 LFGMVVFY  343 (392)
Q Consensus       336 L~~~~v~~  343 (392)
                      |+++.++-
T Consensus       373 l~aw~~v~  380 (382)
T PF12051_consen  373 LFAWIVVN  380 (382)
T ss_pred             HHHHHHHH
Confidence            99988764

It is found in bacterial and eukaryotic proteins.

>TIGR03733 lanti_perm_MutG lantibiotic protection ABC transporter permease subunit, MutG family

Probab=96.98  E-value=0.28  Score=44.84  Aligned_cols=69  Identities=14%  Similarity=0.066  Sum_probs=46.1

Q ss_pred             CchHHHHHHHHHHHhhHHHHHhhhhchhee----ecc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 016275          179 YGATAFVFGNTFSALPYLALISLIPGAIVY----YLP-GLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPN  247 (392)
Q Consensus       179 Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y----~l~-g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~  247 (392)
                      .+...+++||++..+...++..++...+..    ++. +-+.+...+....+.+++.++....+.+.++....+
T Consensus        85 ~s~~~~~~aK~l~~~~~~~is~~l~~~~~~~g~~~i~~~~~~~~~~~l~~~~~l~~~sl~~~~l~l~ls~~~g~  158 (248)
T TIGR03733        85 KSKYKAYLSKLLLLLLCGFFSTFLAIGIFALGFKYLLKVANLPLSLFLIAALLLIIGSLFLYIIHLFVSFAFGM  158 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            478899999999887666665543222221    111 123344566666777788888889999999988775

Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene modeled separate by TIGR03732, while in some species only one subunit is found.

>COG1511 Predicted membrane protein [Function unknown]

Probab=96.89  E-value=0.014  Score=62.17  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=109.3

Q ss_pred             hhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Q 016275          174 RLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGII  253 (392)
Q Consensus       174 ~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~  253 (392)
                      ...+.+...-|++++.+..+.....+..+.....+++.|+...  .-+.+++..+.+++++..+-..+..++.+.  +..
T Consensus       610 ~~~~~~~~~~~~~~~~~~~i~~~~~q~~i~~~~~~~~l~~~~~--~~~~~~~~~i~~s~~f~~ii~~lv~~~g~~--g~~  685 (780)
T COG1511         610 LSDGILNGRVYFFGKNLVFITLGLIQSLIVTLGLVLLLGVEVK--SPLLLVLFAIFSSVAFMIIIYLLVSLFGNP--GKF  685 (780)
T ss_pred             ccccccchHHHHHHhhhHHHHHHHHHHHHHHhcCeEEEEeccC--chhHHHHHHHHHHHHHHHHHHHHHHHhCcc--hHH
Confidence            5667788889999999999988888888888777777777643  333455555556666656555555565643  455


Q ss_pred             HHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHHHhhhccccCchhHHHH
Q 016275          254 TGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDL  333 (392)
Q Consensus       254 ~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~  333 (392)
                      +..++++.++..+|-..|.+..|. +++. +....|++|++..+.....                   +.- ....|...
T Consensus       686 i~ivllvlq~~~~~G~~pi~~~~~-~~~~-l~~~lp~ty~v~~~r~~~~-------------------~~~-~~~~~~~~  743 (780)
T COG1511         686 IAIVLLVLQIAGSGGTFPIQLSPS-FFQI-LHPALPLTYAVNGFREVIG-------------------GPI-PSNLWSGL  743 (780)
T ss_pred             HHHHHHHHHHhccccccchhccHH-HHHH-HHHhccHHHHHHHhHHhhc-------------------cCc-hHHHhhhH
Confidence            555666778888888899999998 5655 9999999999766632221                   111 11377788


Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhccccc
Q 016275          334 AILFGMVVFYRL-VFLGIIKTVEKMKPV  360 (392)
Q Consensus       334 ~iL~~~~v~~~~-la~~~l~~~~~~~~~  360 (392)
                      +++.++.+++++ +.++.+....+.+.+
T Consensus       744 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~  771 (780)
T COG1511         744 LALIGFLILFIIGGLFLKLPLDKKLKKV  771 (780)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            888888777776 444444444443333

>COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones]

Probab=96.88  E-value=0.034  Score=48.29  Aligned_cols=159  Identities=14%  Similarity=0.131  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHH-HHHHHHHHHHHHHHHHhhcCCchhhHHHH
Q 016275           90 TQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQ-ARGSLLMFVASYLTFMTIGGFPSFVEDMK  168 (392)
Q Consensus        90 ~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~er~  168 (392)
                      ..++.+++|++|.-+|.+.....-+........++..-+   |.+.+-.. --.|++.......+..+.         ..
T Consensus         2 ~~~~~l~~rdLrl~~R~~~~~~~~l~F~l~Vi~lfp~~v---Gpd~~~la~iaPgilWia~lLA~lL~l---------~r   69 (221)
T COG2386           2 MAFLALFKRDLRLEFRAKAGILNPLLFFLLVITLFPLAV---GPDPQLLARIAPGILWIAALLASLLGL---------ER   69 (221)
T ss_pred             hhHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhcccc---CCchhHHHHhcchHHHHHHHHHHHHhH---------HH
Confidence            356789999999999999887666666555555554433   33322222 223555544333333222         25


Q ss_pred             HHHHHhhCCCC--------chHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016275          169 VFERERLNGHY--------GATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMI  240 (392)
Q Consensus       169 ~~~rE~~~g~Y--------~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~  240 (392)
                      .|.+|+++|.-        ....-+++|+++....+.+.-++..-+.+.+.|++.  +.+....+.+.+.+...+.+|..
T Consensus        70 lF~~d~edGsLE~l~l~p~pl~~~vl~Kv~ahw~~t~lplvl~sPl~~lll~~~~--~~~~~~~ltLllGtp~ls~~ga~  147 (221)
T COG2386          70 LFRDDYEDGSLEQLMLSPLPLAAVVLGKVLAHWLLTGLPLVLASPLLALLLNMDV--GALGALALTLLLGTPALSFLGAV  147 (221)
T ss_pred             HHHHhhhcCcHHHHHcCCCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH--hHHHHHHHHHHhcchHHHHHHHH
Confidence            78999999862        445567899999877776666666666666777763  45555556666666666666666


Q ss_pred             HHHhccchHHHHHHHHHHHHHH
Q 016275          241 VASLVPNYLTGIITGAGIQGLM  262 (392)
Q Consensus       241 i~~~~~~~~~a~~~~~~~~~~~  262 (392)
                      .+++.-+....-.+.++++.|.
T Consensus       148 gaALtv~lrrgglLl~vlvlPl  169 (221)
T COG2386         148 GAALTVGLRRGGLLLSVLVLPL  169 (221)
T ss_pred             HHHHHhcCccCCchhhHHHHHH
Confidence            6655444433334444444443

>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=96.46  E-value=0.0062  Score=42.89  Aligned_cols=45  Identities=22%  Similarity=0.481  Sum_probs=39.0

Q ss_pred             CCHHHHHHhhhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016275          311 LDGEQVLRDKWQLQMG-YSKWVDLAILFGMVVFYRLVFLGIIKTVEK  356 (392)
Q Consensus       311 ~~g~~~l~~~~~~~~~-~~~~~~~~iL~~~~v~~~~la~~~l~~~~~  356 (392)
                      .-|+++|++ .|+..+ +++|..+++|+|+.++|.++..++|.+.+.
T Consensus        11 tlG~~vL~~-rG~~~~~~WyWIgvgaL~G~~vlFNil~~laL~yL~p   56 (65)
T PF08370_consen   11 TLGVAVLKS-RGLFTESYWYWIGVGALLGFIVLFNILFTLALTYLNP   56 (65)
T ss_pred             cHHHHHHHH-cCCCCCCcEEeehHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            468999999 677654 469999999999999999999999998874

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].

>TIGR01257 rim_protein retinal-specific rim ABC transporter

Probab=96.17  E-value=0.22  Score=58.38  Aligned_cols=183  Identities=11%  Similarity=0.112  Sum_probs=105.4

Q ss_pred             cCCchhhHHHHHHHHH--hhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHH
Q 016275          158 GGFPSFVEDMKVFERE--RLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVE  235 (392)
Q Consensus       158 ~~~~~~~~er~~~~rE--~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~  235 (392)
                      ..+.....||..=.||  +.-|+ +.+.|++|+++..+...++.+++.+++..  .+--.....++..++++++.+++..
T Consensus       669 ~lv~~iV~EKE~rlKE~MkiMGL-~~~~~w~sWfi~~~~~~~i~~~l~~~il~--~~~~~~~s~~~~lfl~~~~y~~s~I  745 (2272)
T TIGR01257       669 MTVKSIVLEKELRLKETLKNQGV-SNAVIWCTWFLDSFSIMSMSIFLLTIFIM--HGRILHYSDPFILFLFLLAFSTATI  745 (2272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCceeecCChHHHHHHHHHHHHHHH
Confidence            3345566788777777  56666 88999999999988766665555444322  1111122345566677777888889


Q ss_pred             HHHHHHHHhccchHHHHHHHHHHHHHHHHhccc-ccCCCCCCccccccccccccHHHHHHHHhHhhhcC----CCccCCC
Q 016275          236 SLMMIVASLVPNYLTGIITGAGIQGLMILGGGF-FRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFE----GLKFDNN  310 (392)
Q Consensus       236 ~~g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~-~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~----~~~~~~~  310 (392)
                      .++.++++++.+...|..++.++.+.+.+--.+ +.-.+.++. ...+.+.-++|.-+++..-....++    |..+.. 
T Consensus       746 ~~~fliS~fFska~~A~~~~~li~f~~~lp~~~~~~~~~~~~~-~~~~~~sL~sp~af~~g~~~i~~~e~~~~G~~w~n-  823 (2272)
T TIGR01257       746 MQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTA-DLKTAVSLLSPVAFGFGTEYLVRFEEQGLGLQWSN-  823 (2272)
T ss_pred             HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcccccCH-HHHHHHHhcCHHHHHHHHHHHHHHhhhCCCccccc-
Confidence            999999999999999988888876554332111 112233443 1222366777877666544333332    222210 


Q ss_pred             CCHHHHHHhhhccccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 016275          311 LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGII  351 (392)
Q Consensus       311 ~~g~~~l~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l  351 (392)
                           +.+. -..+.+.+....+++|++=.+++.++++..=
T Consensus       824 -----~~~~-~~~~d~~s~~~~~~ml~~d~~lY~lL~~Yld  858 (2272)
T TIGR01257       824 -----IGNS-PLEGDEFSFLLSMKMMLLDAALYGLLAWYLD  858 (2272)
T ss_pred             -----cccc-ccCCCCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence                 0000 0001111245556666776777777766543

This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.

>PF06182 ABC2_membrane_6: ABC-2 family transporter protein; InterPro: IPR010390 This family consists of a number of hypothetical bacterial proteins of unknown function

Probab=95.49  E-value=1  Score=40.48  Aligned_cols=113  Identities=13%  Similarity=0.100  Sum_probs=66.9

Q ss_pred             chHHHHHHHHHHH-hhHHHHHhhhhchheeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Q 016275          180 GATAFVFGNTFSA-LPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGI  258 (392)
Q Consensus       180 ~~~~y~~a~~l~~-l~~~~~~~~i~~~i~y~l~g~~~~~~~f~~~~l~~~l~~~~~~~~g~~i~~~~~~~~~a~~~~~~~  258 (392)
                      +...+.+.+-+.. ....++..++.........+.+.+..+++.+.+.+++..+...++..+++..+=-......+.   
T Consensus        72 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~i~~~~~~~~~~~~~l~~g~li~~~i~~~~~~laFw~~~~~~~~---  148 (229)
T PF06182_consen   72 NYLFYLLFRNLGPSSLGFLIVGIILLIYALIQLGIPWSPLNILLFILSLLLGFLINFSIFFIIGLLAFWFTESWGLS---  148 (229)
T ss_pred             CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---
Confidence            5555555554443 222333333322223333567777788888887777777777777777776533222233332   


Q ss_pred             HHHHHHhcccccCCCCCCccccccccccccHHHHHHHH
Q 016275          259 QGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQG  296 (392)
Q Consensus       259 ~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~a  296 (392)
                      .....+++|...|.+-.|+ +.+..+.++.|+.|....
T Consensus       149 ~i~~~l~sg~~~Pl~~fp~-~~~~il~~~lPf~~i~~~  185 (229)
T PF06182_consen  149 YIFYSLLSGAIYPLSIFPG-WIQFILTFILPFAYISYV  185 (229)
T ss_pred             HHHHHHHHHHHccHHHhHH-HHHHHHHHHhhHHHHHHH
Confidence            2334458999999999999 344435555898876554

>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]

Probab=95.46  E-value=1.2  Score=43.20  Aligned_cols=28  Identities=29%  Similarity=0.399  Sum_probs=20.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHhhccCCC
Q 016275          106 DLGYYWFRLGVYVLLGIGLATVFSNLGT  133 (392)
Q Consensus       106 ~~~~~~~~~~~~~~~~ll~G~~f~~~~~  133 (392)
                      |+..++.-.+...+++++.|.+|.++++
T Consensus       296 ~Rg~lI~W~v~~fllglvygs~fg~l~~  323 (536)
T COG3559         296 NRGSLILWTVGLFLLGLVYGSVFGGLGD  323 (536)
T ss_pred             ccCccHHHHHHHHHHHHHHHHHhhhhhh
Confidence            3445556667778899999999987753

>PF12730 ABC2_membrane_4: ABC-2 family transporter protein

Probab=95.33  E-value=0.92  Score=39.70  Aligned_cols=84  Identities=27%  Similarity=0.410  Sum_probs=46.1

Q ss_pred             HHHHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhhhhchhee---ecccc-ccchhhH----HHHHHHHHHHHH
Q 016275          169 VFERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVY---YLPGL-HEGYQHF----IYFVLLLFACML  232 (392)
Q Consensus       169 ~~~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y---~l~g~-~~~~~~f----~~~~l~~~l~~~  232 (392)
                      .+.+|+++|.        .++..++.+|.++.....++..++...+.+   .+.+. +.+...+    ..+.+..++...
T Consensus        69 ~~~~e~~~~~~~~~~~~~~~r~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (232)
T PF12730_consen   69 LFSREYKNGTIKLLLSRPISRKKIFLAKFIVILIIILLLFLISFLISLLIGLLFGFSGFDYSSLLQYLISYLLLFLLLSL  148 (232)
T ss_pred             HHHHHHhcChhhHhhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHHHHHHHHHHHHHHHH
Confidence            4556666665        378999999999987666555554333322   22232 2222222    233334444444


Q ss_pred             HHHHHHHHHHHhccchHHHHH
Q 016275          233 LVESLMMIVASLVPNYLTGII  253 (392)
Q Consensus       233 ~~~~~g~~i~~~~~~~~~a~~  253 (392)
                      ....+ .+++...+|...+..
T Consensus       149 ~~~~~-~~i~~~~~~~~~~i~  168 (232)
T PF12730_consen  149 FISLL-LFISSLFRNSIVAII  168 (232)
T ss_pred             HHHHH-HHHHHHHhhHHHHHH
Confidence            44455 777888887554443

>COG1668 NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]

Probab=94.48  E-value=1.1  Score=44.08  Aligned_cols=116  Identities=15%  Similarity=0.001  Sum_probs=67.8

Q ss_pred             hCCCCchHHHHHHHHHHHhhHHHHHhhhhchhee---------eccc--cccchhhHHHHHHHHHHHH-HHHHHHHHHHH
Q 016275          175 LNGHYGATAFVFGNTFSALPYLALISLIPGAIVY---------YLPG--LHEGYQHFIYFVLLLFACM-LLVESLMMIVA  242 (392)
Q Consensus       175 ~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y---------~l~g--~~~~~~~f~~~~l~~~l~~-~~~~~~g~~i~  242 (392)
                      .++. ++..++.||++.-....+++..++.+.++         ...+  +......+..+.+...+.+ +...+++.+++
T Consensus       224 ssPv-Sr~~ii~gKil~~~~v~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~l~~~~l~a~l~  302 (407)
T COG1668         224 SSPV-SRSEIVFGKILGAALVGLTQIALWLLALTIATFLSLAVALAGTGLALLPAYLLLFALSLFLLGLLLYAALAAFLG  302 (407)
T ss_pred             ccCc-ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444 99999999999999998888777666652         1111  1222333434444444444 44455888899


Q ss_pred             HhccchHHHHHHHHHHHHHH-----HHhcccccCCCCCCccccccccccccHHHHH
Q 016275          243 SLVPNYLTGIITGAGIQGLM-----ILGGGFFRLPNDLPHPFWKYPLYYIAFHKYA  293 (392)
Q Consensus       243 ~~~~~~~~a~~~~~~~~~~~-----~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~  293 (392)
                      .++++.+.|+.....+..+.     .+..+...|...+..  +..++.+++|+.=.
T Consensus       303 ~~a~~~k~aq~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~--~ls~IPf~~p~~~~  356 (407)
T COG1668         303 AMAGSIKEAQTLISPLTFLAIIAFLPLSFISAAPDNAVAL--ILSAIPFLLPVAML  356 (407)
T ss_pred             HHhcCHHHHHHHhhHHHHHHHHHHHHHHHhccCCcchhHH--HHhhccchhHHHHH
Confidence            99999988888877332222     223334445554543  33335555554433

>TIGR01257 rim_protein retinal-specific rim ABC transporter

Probab=92.30  E-value=1.1  Score=52.79  Aligned_cols=96  Identities=13%  Similarity=0.006  Sum_probs=68.9

Q ss_pred             chhhHHHHHHH--HHhhCCCCchHHHHHHHHHHHhhHHHHHhhhhchheeeccccc--cchhhHHHHHHHHHHHHHHHHH
Q 016275          161 PSFVEDMKVFE--RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLH--EGYQHFIYFVLLLFACMLLVES  236 (392)
Q Consensus       161 ~~~~~er~~~~--rE~~~g~Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y~l~g~~--~~~~~f~~~~l~~~l~~~~~~~  236 (392)
                      .....||..=.  -..-+|. ++.+|+++.++.++...++..+++.++++ .++..  .+...+...++++++.+++...
T Consensus      1699 ~~~V~ER~skaK~lQ~vSGv-~~~~YWls~fl~D~~~y~i~~~~~i~i~~-~f~~~~~~~~~~l~~~~lll~lyG~a~ip 1776 (2272)
T TIGR01257      1699 LYLIQERVNKAKHLQFISGV-SPTTYWLTNFLWDIMNYAVSAGLVVGIFI-GFQKKAYTSPENLPALVALLMLYGWAVIP 1776 (2272)
T ss_pred             eeeehHHhhhHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhChhhhcCcchHHHHHHHHHHHHHHHHH
Confidence            33445666433  3467887 99999999999999888777777665554 33321  1234566667788889999999


Q ss_pred             HHHHHHHhccchHHHHHHHHHH
Q 016275          237 LMMIVASLVPNYLTGIITGAGI  258 (392)
Q Consensus       237 ~g~~i~~~~~~~~~a~~~~~~~  258 (392)
                      +..++|.++++...|......+
T Consensus      1777 ~tYl~SflF~~~~~A~~~~~~i 1798 (2272)
T TIGR01257      1777 MMYPASFLFDVPSTAYVALSCA 1798 (2272)
T ss_pred             HHHHHHHhhCCchhHHHHHHHH
Confidence            9999999999998887654433

This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.

>TIGR03732 lanti_perm_MutE lantibiotic protection ABC transporter permease subunit, MutE/EpiE family

Probab=91.74  E-value=10  Score=34.48  Aligned_cols=114  Identities=13%  Similarity=0.145  Sum_probs=57.3

Q ss_pred             HHHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhhhhchhee---eccccc-cchhhHHHHHHHHHHHHHHHHHH
Q 016275          170 FERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVY---YLPGLH-EGYQHFIYFVLLLFACMLLVESL  237 (392)
Q Consensus       170 ~~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y---~l~g~~-~~~~~f~~~~l~~~l~~~~~~~~  237 (392)
                      ..+|+++|-        .+....++||++.-....++..++..+..+   ++.|.. .+...++...+..++.++....+
T Consensus        63 ~~~E~~~~~~k~lls~pvs~~~~~~aK~l~~~~~~~~s~~i~~i~~~~~g~l~~~~~~~~~~~~~~~l~~~i~sl~~i~l  142 (241)
T TIGR03732        63 HKKEKKASNYRAILSLPVDLKKVWIAKILVIAIYLLISCIILFIGLVLIGFVIPPSNISIGQALLASLLIWLTSLWQIPL  142 (241)
T ss_pred             HHHHHhccCcceEeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHH
Confidence            455555444        367788999999877666555554442222   122311 12334444445555555555566


Q ss_pred             HHHHHHhccchHHHHHHHHHHHHH-HHHhcccccCCCCCCccccccccccccHHHHHHHHhH
Q 016275          238 MMIVASLVPNYLTGIITGAGIQGL-MILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMF  298 (392)
Q Consensus       238 g~~i~~~~~~~~~a~~~~~~~~~~-~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~  298 (392)
                      -+.++... +..    . ++.+.. ..+..|.+...+  +  .|     ++.|..|....+.
T Consensus       143 ~l~ls~~~-g~~----~-si~ig~~~~li~g~~~~~~--~--~w-----~~~P~s~~~rl~~  189 (241)
T TIGR03732       143 CLFLARKF-GMF----V-SILVNLVLGLIFGIVLATK--S--FW-----WLFPYSWPSRLMC  189 (241)
T ss_pred             HHHHHHHH-HHH----H-HHHHHHHHHHHHHHHHHcc--C--Ce-----EEechHHHHHHHh
Confidence            66665443 211    1 111111 133345543222  2  23     4677788877774

Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family is largely restricted to gallidermin-family lantibiotic cassettes, but also include orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes. In most species, this subunit is paralogous to an adjacent gene, modeled separately.

>COG4200 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.62  E-value=15  Score=32.87  Aligned_cols=145  Identities=15%  Similarity=0.156  Sum_probs=82.5

Q ss_pred             HHHhhCCC--------CchHHHHHHHHHHHhhHHHHHhhhhchhee---eccccccch--hhHHHHHHHHHHHHHHHHHH
Q 016275          171 ERERLNGH--------YGATAFVFGNTFSALPYLALISLIPGAIVY---YLPGLHEGY--QHFIYFVLLLFACMLLVESL  237 (392)
Q Consensus       171 ~rE~~~g~--------Y~~~~y~~a~~l~~l~~~~~~~~i~~~i~y---~l~g~~~~~--~~f~~~~l~~~l~~~~~~~~  237 (392)
                      .-|+.+|.        +...-.|++|++.-+....+..++.....+   ...|...+.  ..++.....-++.+....++
T Consensus        76 ~~Ehk~n~W~~ll~lPv~r~~~YlsK~~~vf~L~~l~~li~~~~i~~~gv~~g~~~s~~~~~~~~~~~~gll~alpl~~l  155 (239)
T COG4200          76 SVEHKSNMWKHLLLLPVARWKVYLSKVFWVFILVALTSLILFISIWTVGVLYGGVKSFELAAAFTLLILGLLLALPLVAL  155 (239)
T ss_pred             HHHhcCCCchhhheeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            45655555        467777899999877655555333332222   123433332  23344444445556666667


Q ss_pred             HHHHHHhccchHHHHHHHHHHHHHHHHhcccccCCCCCCccccccccccccHHHHHHHHhHhhhcCCCccCCCCCHHHHH
Q 016275          238 MMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVL  317 (392)
Q Consensus       238 g~~i~~~~~~~~~a~~~~~~~~~~~~l~sG~~~~~~~iP~~~w~~~l~~lsp~~y~~~al~~~~~~~~~~~~~~~g~~~l  317 (392)
                      =...+...+|...|..++...  |..+-    ..-++.|+  |   +.|-+|..-..                       
T Consensus       156 Q~wLsm~fknf~~al~igI~l--~a~fv----a~~~s~~~--~---~PW~~pi~~~~-----------------------  201 (239)
T COG4200         156 QFWLSMRFKNFAVALVIGIFL--PALFV----ASAESLPV--W---LPWASPILPMF-----------------------  201 (239)
T ss_pred             HHHHHHHHHhhhHhHHHHHhH--HHHHH----HhccccCc--c---ccchhhhhhhh-----------------------
Confidence            777788888888777766554  32222    23456887  4   66777765111                       


Q ss_pred             HhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016275          318 RDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVE  355 (392)
Q Consensus       318 ~~~~~~~~~~~~~~~~~iL~~~~v~~~~la~~~l~~~~  355 (392)
                            +...+.-.++..+.+.++++.+.+++.+++++
T Consensus       202 ------~~~l~v~~~i~~~~v~~ll~~l~s~l~~~r~~  233 (239)
T COG4200         202 ------SGSLSVETGILFLGVLALLFLLSSFLFFKRKK  233 (239)
T ss_pred             ------ccccccchhHHHHHHHHHHHHHHHHHHHhhhc
Confidence                  11111334555666677777888887777654

>PF09847 DUF2074: Predicted permease (DUF2074); InterPro: IPR018646 This family has no known function

Probab=86.57  E-value=22  Score=35.56  Aligned_cols=106  Identities=8%  Similarity=0.049  Sum_probs=59.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCChhhHHHHHHHHHHHHHHHHHHhhcCCchh
Q 016275           84 AHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSF  163 (392)
Q Consensus        84 ~~~s~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~~~~~ll~G~~f~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~  163 (392)
                      ++.+...-...+++.++|...|++..+. -+..|+++.+..-....+.++.   ..   ...+.+......+++......
T Consensus       242 ~~~k~~~~~~al~~KDlK~~~R~sq~l~-~~L~Pl~~~i~~i~~~~~~~~~---~~---~~~~~i~~~~~~ss~~~~~~l  314 (449)
T PF09847_consen  242 FKIKIRSPLLALFKKDLKILFRKSQLLF-GFLYPLVFVIPFIFMILSSGDP---LS---LTIFYIIIIGVYSSMMSDALL  314 (449)
T ss_pred             eccccCcchHHHHHHHHHHHHcchhHHH-HHHHHHHHHHHHHHHHhhcCch---hH---HHHHHHHHHHHHHHHHHHHHH
Confidence            3344444567799999999999988876 4777777766542222122211   11   112222222222233333344


Q ss_pred             hHHHHHHHHHhhCCCCchHHHHHHHHHHHhhHHH
Q 016275          164 VEDMKVFERERLNGHYGATAFVFGNTFSALPYLA  197 (392)
Q Consensus       164 ~~er~~~~rE~~~g~Y~~~~y~~a~~l~~l~~~~  197 (392)
                      ..|++.+.=-+.-+. +...+..+|.+.......
T Consensus       315 ~~E~~~~~~l~sLPi-~~~~~v~sKil~~~~i~~  347 (449)
T PF09847_consen  315 KIEGEGFEFLRSLPI-KKREFVRSKILIPSIIPS  347 (449)
T ss_pred             HHhhhcchhHhhCCC-ChHHHHHHHHHHHHHHHH
Confidence            456665544455555 888899999998764433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	392
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 31/200 (15%), Positives = 52/200 (26%), Gaps = 72/200 (36%)

Query: 20  HFLKTINKDFQ-KDIEEGLAGVIPTEEAIDILTKSYKSSDNYLQLRSQVAEICKAQDSGA 78
            F      +F  KD+++    ++  EE   I+     S D           +   Q+   
Sbjct: 24  VFEDAFVDNFDCKDVQDMPKSILSKEEIDHII----MSKDAVSGTLRLFWTLLSKQEEMV 79

Query: 79  LEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDNNSI 138
                              + FV     + Y +               + S + T+    
Sbjct: 80  -------------------QKFVEEVLRINYKF---------------LMSPIKTEQRQ- 104

Query: 139 QARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYL-- 196
                                 PS +  M + +R+RL        F   N     PYL  
Sbjct: 105 ----------------------PSMMTRMYIEQRDRLYN--DNQVFAKYNVSRLQPYLKL 140

Query: 197 --ALISLIPGAIVYYLPGLH 214
             AL+ L P   V     + 
Sbjct: 141 RQALLELRPAKNV----LID 156

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 8e-05
 Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 38/167 (22%)

Query: 29  FQKD--IEEGLAGVI----PTEEAIDILTKSYKSS--------------DNYLQLRSQVA 68
           F     I   L  +I       + + ++ K +K S                YL+L+    
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK---- 436

Query: 69  EICKAQDSGALEKKSAHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLA--- 125
              K ++  AL +       + +     S   +  Y D  Y++  +G + L  I      
Sbjct: 437 --VKLENEYALHRSIVDHYNIPKT--FDSDDLIPPYLD-QYFYSHIG-HHLKNIEHPERM 490

Query: 126 TVFSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFER 172
           T+F  +  D   ++ +            +   G   + ++ +K ++ 
Sbjct: 491 TLFRMVFLDFRFLEQK-----IRHDSTAWNASGSILNTLQQLKFYKP 532

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 66/442 (14%), Positives = 129/442 (29%), Gaps = 124/442 (28%)

Query: 14  LQNPSDHFLKTINKDFQKDIEEGLAGVIPTEEAID-----ILTKSYKSSDNYLQLRSQVA 68
           LQ      L  I+ ++    +      +            + +K Y++    L L + V 
Sbjct: 202 LQK----LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC--LLVLLN-V- 253

Query: 69  EICKAQDSGALEKKSAHADFLTQC-IVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATV 127
                Q++ A         F   C I+LT+R                 V   L     T 
Sbjct: 254 -----QNAKAWNA------FNLSCKILLTTRF--------------KQVTDFLSAATTTH 288

Query: 128 FSNLGTDNNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFE--RERLNGH------Y 179
            S L   + ++       +    YL             D +  +  RE L  +       
Sbjct: 289 IS-LDHHSMTLTPDEVKSLL-LKYL-------------DCRPQDLPREVLTTNPRRLSII 333

Query: 180 GATAFVFGNTFSALPYL---ALISLIPGAIVYYLPGLHEG-YQHFIYF---------VLL 226
             +      T+    ++    L ++I  ++    P  +   +     F         +L 
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 227 LFACMLLVESLMMIVASLV---------PNYLTGI--------ITGAGIQGL--MILGGG 267
           L    ++   +M++V  L                I        +       L   I+   
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-- 451

Query: 268 FFRLP-----NDLPHPFW-KYPLYYIAFH-KYAYQG----MFKNEFEGLKFDNNLDGEQV 316
            + +P     +DL  P+  +Y   +I  H K         +F+  F   +F   L  EQ 
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF---L--EQK 506

Query: 317 LRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMSVPMKQTTQIM 376
           +R            ++       + FY+     I     K + +V A +    K    ++
Sbjct: 507 IRHDSTAWNASGSILN---TLQQLKFYKPY---ICDNDPKYERLVNAILDFLPKIEENLI 560

Query: 377 ENPC------ATPPQEDKIFYQ 392
            +        A   +++ IF +
Sbjct: 561 CSKYTDLLRIALMAEDEAIFEE 582

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00