Citrus Sinensis ID: 016337

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-
Protein Sequence
MAPQSAMASSQNINEEADHNRDWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVYFHGQRDNEDKQNSHPDVEAEGSPTRNNPALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLNPAASTPERPSSNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAFPIQQSPKS
Secondary Structure (PSIPRED)
cccHHHHHHcccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHHccccccEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccccccEEEEccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccccccccccccccHcccccccccccccHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccHHcccccccEEEEEcccccccccccccccccccccEEccccccccccccEEEEEEEEEEEccccccccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccEHcHHHHHccccEEEEEccccccccc
Coil and Loop (DISEMBL)
mapqsamassqnineeadhnrdwetwkkvdgikfkptAEVLIFVYLAGmvsgstdgpifpliqevdvyqyepsklkskahdfgdgnmyFFSRVQKKYKkgsirerkakggfwktgkcntvrgkdggtgtersltyysyrhdpkpgekpikTHWLMREYMLkrpkndkesMALCVVYFhgqrdnedkqnshpdveaegsptrnnpalihwdsnleainleetlppswsysnvfalspncypllnstpnpaaipyeqplffppnsfqnttditfaswgsispapnnnfplyssnlnpaastperpssnsfQNMINMmgvssaapadsiintpnnwcstlaeldpqnwmverqeadgspyqyssndDIQLLEQYLFENdqmwfqafpiqqspks
Flexible Loop (DISEMBL)
mapqsamassqnineeadhnrdwetWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLkskahdfgdgnMYFFSRVQkkykkgsirerkakggfwktgkcntvrgkdggtgtersltyysyrhdpkpgekpiktHWLMREYMLKRPKNDKESMALCVVYFHGqrdnedkqnSHPDVEAEGSPTRNNPALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLNPAASTPERPSSNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAfpiqqspks
Low Complexity Region (SEG)
MAPQSAMASSQNINEEADHNRDWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVYFHGQRDNEDKQNSHPDVEAEGSPTRNNPALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLNPAASTPERPSSNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAFPIQQSPKS
Disordered region (IsUnstruct)
*********************DWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRG*********SLTYYSY**********IKTHWLMREYMLK*******SMALCVVYFH**************************ALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSI***********************************************IINTPNNWCSTLAELDPQNWMV**************NDDIQLLEQYLFENDQMWFQAFPI******
Disordered Region (DISOPRED)
****************************VDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVY**************************************************************************************************************************************************************************************YSSNDDIQLLEQYLFENDQMWFQAF*IQ*****
Disordered Region (DISEMBL)
*****************DHNRDWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVYFHGQRD******************RNNPALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLN**********SNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAFPIQQSPKS
Disordered Region (DISPRO)
*************************WKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVYFHGQ**********************************************SYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLNPAASTPERPSSNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAFPIQ*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPQSAMASSQNINEEADHNRDWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKNDKESMALCVVYFHGQRDNEDKQNSHPDVEAEGSPTRNNPALIHWDSNLEAINLEETLPPSWSYSNVFALSPNCYPLLNSTPNPAAIPYEQPLFFPPNSFQNTTDITFASWGSISPAPNNNFPLYSSNLNPAASTPERPSSNSFQNMINMMGVSSAAPADSIINTPNNWCSTLAELDPQNWMVERQEADGSPYQYSSNDDIQLLEQYLFENDQMWFQAFPIQQSPKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	391	2.2.26 [Sep-21-2011]
Q8H115	312	NAC domain-containing pro	no	no	0.309	0.387	0.351	8e-13
O49255	268	NAC transcription factor	no	no	0.312	0.455	0.374	2e-12
Q9LDY8	317	NAC domain-containing pro	no	no	0.352	0.435	0.342	3e-12
Q7F2L3	303	NAC domain-containing pro	yes	no	0.350	0.452	0.341	4e-12
Q39013	289	NAC domain-containing pro	no	no	0.352	0.477	0.329	5e-12
Q7EZT1	276	NAC domain-containing pro	no	no	0.312	0.442	0.358	5e-12
A2YMR0	425	NAC transcription factor	N/A	no	0.340	0.312	0.348	6e-12
Q52QH4	318	NAC domain-containing pro	no	no	0.350	0.430	0.345	9e-12
Q8H4S4	425	NAC transcription factor	no	no	0.340	0.312	0.348	1e-11
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.312	0.431	0.330	1e-11

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPI-FPLIQEVDVYQYEPSKLKSKAHDFGDGNMYF 89
           G +F PT E L+  YL    +     PI  P+I E+D+Y++ P +L   A  +G+   YF
Sbjct: 53  GFRFHPTDEELVKFYLCRRCASE---PINVPVIAEIDLYKFNPWELPEMAL-YGEKEWYF 108

Query: 90  FSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           FS   +KY  GS   R A  G+WK    +   GK    G +++L +Y+ +       K I
Sbjct: 109 FSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGK-----APKGI 163

Query: 150 KTHWLMREYML 160
           KT+W+M EY L
Sbjct: 164 KTNWIMHEYRL 174

May be involved in regulation of seed germination under flooding.
Arabidopsis thaliana (taxid: 3702)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E LI  YL    + S   P+  +I EVD+Y+++P +L  K  +FG+   YFF
Sbjct: 12  GFRFHPTDEELIVYYLRNQ-TMSKPCPV-SIIPEVDIYKFDPWQLPEKT-EFGENEWYFF 68

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S  ++KY  G    R A  G+WK TG    +       G +++L +Y  R  P  G   I
Sbjct: 69  SPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGR--PPKG---I 123

Query: 150 KTHWLMREYML 160
           KT W+M EY L
Sbjct: 124 KTDWIMHEYRL 134

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G        LI E+D+Y+++P  L SKA  FG+   YFF
Sbjct: 17  GFRFYPTDEELMVEYLCRKAAGHDFS--LQLIAEIDLYKFDPWVLPSKAL-FGEKEWYFF 73

Query: 91  SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDG-GTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R A  G+WK    + V   +G   G +++L +Y  +       K  
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGK-----APKGT 128

Query: 150 KTHWLMREYMLKRPKNDKESM-----ALCVVY 176
           KT+W+M EY L  P     S       LC +Y
Sbjct: 129 KTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 160

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 18/155 (11%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPI-FPLIQEVDVYQYEPSKLKSKAHDFGDGNMYF 89
           G +F PT E L+  YL    +G    PI  P+I E+D+Y+++P +L   A  +G+   YF
Sbjct: 12  GFRFHPTDEELVMHYLCRRCAGL---PIAVPIIAEIDLYKFDPWQLPRMAL-YGEKEWYF 67

Query: 90  FSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           FS   +KY  GS   R A  G+WK    +   G       +++L +Y+ +  PK GE   
Sbjct: 68  FSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALVFYAGKA-PK-GE--- 122

Query: 150 KTHWLMREYMLK---RPKNDKESM-----ALCVVY 176
           KT+W+M EY L    R    K S+      LC +Y
Sbjct: 123 KTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIY 157

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 17/155 (10%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +  +     P+I E+D+Y+Y+P +L   A  +G+   YFF
Sbjct: 10  GFRFHPTDEELVMHYLCRKCASQSIA--VPIIAEIDLYKYDPWELPGLAL-YGEKEWYFF 66

Query: 91  SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIK 150
           S   +KY  GS   R A  G+WK    +   G     G +++L +Y+ +  PK GE   K
Sbjct: 67  SPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKA-PK-GE---K 121

Query: 151 THWLMREYML----KRPKNDKESM-----ALCVVY 176
           T+W+M EY L    +  +  K S+      LC +Y
Sbjct: 122 TNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIY 156

Arabidopsis thaliana (taxid: 3702)

>sp|Q7EZT1|NAC67_ORYSJ NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G    P+ P+I E+D+Y+++P  L  +A  FG    YFF
Sbjct: 20  GFRFHPTDEELVAHYLCPRAAGRA-APV-PIIAELDLYRHDPWDLPHRAL-FGRREWYFF 76

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           +   +KY  GS   R A  G+WK TG    V       G +++L +Y   H   P  + +
Sbjct: 77  TPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFY---HGKPP--RGV 131

Query: 150 KTHWLMREYML 160
           KT W+M EY L
Sbjct: 132 KTEWIMHEYRL 142

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 72.4 bits (176), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 16/149 (10%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    + S   P+  +I EVD+Y+++P +L  KA +FG+   YFF
Sbjct: 32  GFRFHPTDEELVVHYLKKKAA-SVPLPVT-IIAEVDLYKFDPWELPEKA-NFGEQEWYFF 88

Query: 91  SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGT----GTERSLTYYSYRHDPKPGE 146
           S   +KY  G+   R A  G+WK    +      G T    G +++L +  YR  P  G 
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVF--YRGKPPKG- 145

Query: 147 KPIKTHWLMREYMLKRPKNDKESMALCVV 175
             +KT+W+M EY L     D  S A  V 
Sbjct: 146 --VKTNWIMHEYRL----TDTSSSAAAVA 168

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 22/159 (13%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPI-FPLIQEVDVYQYEPSKLKSKAHDFGDGNMYF 89
           G +F PT E L+  YL   V+     P+  P+I EVD+Y+ +P  L  KA  FG    YF
Sbjct: 24  GFRFHPTDEELVVHYLCRKVARQ---PLPVPIIAEVDLYKLDPWDLPEKAL-FGRKEWYF 79

Query: 90  FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTV--RGKDGGTGTERSLTYYSYRHDPKPGE 146
           F+   +KY  GS   R A  G+WK TG    V  +G     G +++L +YS +       
Sbjct: 80  FTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGK-----AP 134

Query: 147 KPIKTHWLMREYML----KRPKNDKESM-----ALCVVY 176
           + +KT W+M EY L    + P   K S       LC +Y
Sbjct: 135 RGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLY 173

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 16/149 (10%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    + S   P+  +I EVD+Y+++P  L  KA +FG+   YFF
Sbjct: 32  GFRFHPTDEELVVHYLKKKAA-SVPLPVT-IIAEVDLYKFDPWDLPEKA-NFGEQEWYFF 88

Query: 91  SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGT----GTERSLTYYSYRHDPKPGE 146
           S   +KY  G+   R A  G+WK    +      G T    G +++L +  YR  P  G 
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVF--YRGKPPKG- 145

Query: 147 KPIKTHWLMREYMLKRPKNDKESMALCVV 175
             +KT+W+M EY L     D  S A  V 
Sbjct: 146 --VKTNWIMHEYRL----TDTSSSAAAVA 168

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +        P+I E+D+Y++ P +L   +  +G+   YFF
Sbjct: 10  GFRFHPTDEELVKFYLCRKCASEQISA--PVIAEIDLYKFNPWELPEMSL-YGEKEWYFF 66

Query: 91  SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIK 150
           S   +KY  GS   R A  G+WK    +   GK    G +++L +Y+ +       K IK
Sbjct: 67  SPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGK-----APKGIK 121

Query: 151 THWLMREYML 160
           T+W+M EY L
Sbjct: 122 TNWIMHEYRL 131

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
297811871	476	ANAC086 [Arabidopsis lyrata subsp. lyrat	0.355	0.292	0.370	1e-13
302399019	373	NAC domain class transcription factor [M	0.312	0.327	0.410	2e-13
224112333	340	NAC domain protein, IPR003441 [Populus t	0.404	0.464	0.346	4e-13
224106189	513	NAC domain protein, IPR003441 [Populus t	0.363	0.276	0.311	7e-13
225435840	297	PREDICTED: NAC domain-containing protein	0.352	0.464	0.375	1e-12
357133626	308	PREDICTED: NAC domain-containing protein	0.429	0.545	0.329	1e-12
6714418	479	NAM-like protein (no apical meristem) [A	0.337	0.275	0.359	2e-12
295913218	176	transcription factor [Lycoris longituba]	0.352	0.784	0.386	2e-12
297832960	481	predicted protein [Arabidopsis lyrata su	0.355	0.288	0.363	2e-12
186509710	479	NAC domain containing protein 45 [Arabid	0.355	0.290	0.363	2e-12

>gi|297811871|ref|XP_002873819.1| ANAC086 [Arabidopsis lyrata subsp. lyrata] gi|297319656|gb|EFH50078.1| ANAC086 [Arabidopsis lyrata subsp. lyrata]

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAH-DFGDGNMYF 89
           G +F PT E LI  YL   ++G        +I EVD+Y+ EP KL  K+     D   YF
Sbjct: 9   GFRFHPTDEELITYYLKRKINGQEIE--LEIIPEVDLYKCEPCKLAGKSLLPSKDQEWYF 66

Query: 90  FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
           FS   +KY  GS   R  KGG+WK TGK   V  +D   GT+++L YY  R         
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGR-----APHG 121

Query: 149 IKTHWLMREYMLKRPK------NDKESMALCVVY 176
           I+T W+M EY L   +        +++ ALC V+
Sbjct: 122 IRTGWVMHEYRLDETECVPSAFGMQDAYALCRVF 155

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399019|gb|ADL36804.1| NAC domain class transcription factor [Malus x domestica]

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 12/134 (8%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E LI  YL   V+ ST  P+  +I EVD+Y+++P +L +KA  FG+   YFF
Sbjct: 11  GFRFHPTDEELILHYLIKKVA-STPLPV-SIIAEVDIYKFDPWELPAKAA-FGEKEWYFF 67

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGG---TGTERSLTYYSYRHDPKPGE 146
           S   +KY  G+   R A  G+WK TG   T+    GG    G +++L +Y  R  P  G 
Sbjct: 68  SPRDRKYPNGARPNRAAASGYWKATGTDKTIVAPSGGRQNVGVKKALVFYKGR--PPKG- 124

Query: 147 KPIKTHWLMREYML 160
             IKT+W+M EY L
Sbjct: 125 --IKTNWIMHEYRL 136

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112333|ref|XP_002316156.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222865196|gb|EEF02327.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 18/176 (10%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAH-DFGDGNMYF 89
           G +F PT E L+  YL   ++G T      +I EVD+Y+ EP  L  K+     D   YF
Sbjct: 9   GFRFHPTDEELVVYYLDRKINGRTIE--LEIIPEVDLYKCEPWDLPDKSFLPSKDLEWYF 66

Query: 90  FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
            S   KKY  GS   R  K G+WK TGK   V  +    G +++L YY  R         
Sbjct: 67  LSPRDKKYPNGSRTNRATKAGYWKATGKDRPVNSQKRPVGMKKTLVYYRGR-----APHG 121

Query: 149 IKTHWLMREYML------KRPKNDKESMALCVVY---FHGQRDNEDKQNSHPDVEA 195
           I+T+W+M EY L        P + K+S ALC V+    H  +  E+K N + + +A
Sbjct: 122 IRTNWVMHEYRLIDSLCGAAPSSLKDSYALCRVFKKTIHIPKKKEEKNNGNEEKDA 177

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106189|ref|XP_002314078.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850486|gb|EEE88033.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 25/167 (14%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPL----IQEVDVYQYEPSKLKSKAHDFGDGN 86
           G +F P    L+  YL   V G       PL    I +V +YQY+P  L  +   FG+  
Sbjct: 111 GYRFCPHDHELVIHYLTNKVKG------LPLPRNKIVDVILYQYDPEYLADRYQKFGEKE 164

Query: 87  MYFFSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPG 145
            YFF+   +KYK GS   R A GG+WK TG    +   +   G  ++L YY+ +      
Sbjct: 165 WYFFTPRDRKYKNGSRPNRAANGGYWKATGADKNITHDEAVVGYRKALVYYTGK-----A 219

Query: 146 EKPIKTHWLMREYMLKRP----KNDKESM-----ALCVVYFHGQRDN 183
            K  KT+W+M E+ +  P    +N ++ M      LC +Y   ++ N
Sbjct: 220 PKGDKTNWIMHEFRVNEPIPQVRNHRDDMRLDEWVLCRIYKKQEKRN 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435840|ref|XP_002283807.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera] gi|297746521|emb|CBI16577.3| unnamed protein product [Vitis vinifera]

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 81/157 (51%), Gaps = 19/157 (12%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    S  T  P+ P+I E+D+Y+Y+P +L  KA  FG    YFF
Sbjct: 16  GFRFHPTDEELVVHYLCRKASYQT-LPV-PIIVEIDLYKYDPWQLPEKAL-FGIKEWYFF 72

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVR--GKDGGTGTERSLTYYSYRHDPKPGEK 147
           +   +KY  GS   R A  G+WK TG    VR  G     G +++L +YS +       K
Sbjct: 73  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVRPTGSTKAVGIKKALVFYSGK-----APK 127

Query: 148 PIKTHWLMREYMLKRP--KNDKESM------ALCVVY 176
             KT W+M EY L +P   +DK+S        LC +Y
Sbjct: 128 GTKTDWIMHEYRLAQPNRSSDKKSSLRLDDWVLCRIY 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357133626|ref|XP_003568425.1| PREDICTED: NAC domain-containing protein 48-like [Brachypodium distachyon]

 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 23/191 (12%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPI-FPLIQEVDVYQYEPSKLKSKAHDFGDGNMYF 89
           G +F PT E L+  YL    +G    PI  P+I EVD+Y+Y+P +L   A  +G+   YF
Sbjct: 23  GFRFHPTDEELVMHYLCRRCAGL---PISVPIIAEVDLYKYDPWQLPRMAL-YGEKEWYF 78

Query: 90  FSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           FS   +KY  GS   R A  G+WK    +   G       +++L +Y+ +       K  
Sbjct: 79  FSPRDRKYPNGSRPNRSAGAGYWKATGADKPVGTPTPLAIKKALVFYAGK-----APKGD 133

Query: 150 KTHWLMREYMLK---RPKNDKESM-----ALCVVY----FHGQRDNEDKQNSHPDVEAEG 197
           KT+W+M EY L    R    K S+      LC +Y       Q+ +  K+ S P   A G
Sbjct: 134 KTNWIMHEYRLADVDRSARRKNSLRLDDWVLCRIYNKKGVPEQKPSAAKEGS-PTHAAVG 192

Query: 198 SPTRNNPALIH 208
           SP    PAL+ 
Sbjct: 193 SPPEQKPALLQ 203

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6714418|gb|AAF26106.1|AC012328_9 NAM-like protein (no apical meristem) [Arabidopsis thaliana]

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 75/153 (49%), Gaps = 21/153 (13%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E LI  YL   ++G        +I EVD+Y+ EP        D  D   YFF
Sbjct: 9   GFRFHPTDEELITYYLKRKINGLEIE--LEVIAEVDLYKCEPW-------DLPDQEWYFF 59

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R  KGG+WK TGK   V  +D   GT+++L YY  R         I
Sbjct: 60  SPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGR-----APHGI 114

Query: 150 KTHWLMREYMLKRPKND------KESMALCVVY 176
           +T W+M EY L   + +      +++ ALC V+
Sbjct: 115 RTGWVMHEYRLDETECEPSAYGMQDAYALCRVF 147

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|295913218|gb|ADG57867.1| transcription factor [Lycoris longituba]

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 20/158 (12%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL   V G  + P+ P+I EVD+Y+Y+P  L  KA  FG    YFF
Sbjct: 17  GFRFHPTDEELVVYYLCRKV-GKQNLPV-PIIAEVDLYKYDPWDLPEKAL-FGQREWYFF 73

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTV--RGKDGGTGTERSLTYYSYRHDPKPGEK 147
           +   +KY  GS   R A  G+WK TG    V  +G +   G +++L +Y   H   P  K
Sbjct: 74  THRDRKYPNGSRPNRAAGRGYWKATGADKPVVPKGANRPLGIKKALVFY---HGKAP--K 128

Query: 148 PIKTHWLMREYML----KRPKNDKESM-----ALCVVY 176
            IKT W+M EY L    + P N+K S+      LC +Y
Sbjct: 129 GIKTDWIMHEYRLADTSRAPTNNKGSLRLDDWVLCRLY 166

Source: Lycoris longituba

Species: Lycoris longituba

Genus: Lycoris

Family: Amaryllidaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832960|ref|XP_002884362.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330202|gb|EFH60621.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHD-FGDGNMYF 89
           G +F PT E LI  YL   ++G        +I EVD+Y+ EP  L  K+     D   YF
Sbjct: 9   GFRFHPTDEELITYYLKRKINGLEIE--LEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYF 66

Query: 90  FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
           FS   +KY  GS   R  KGG+WK TGK   V  +D   GT+++L YY  R         
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGR-----APHG 121

Query: 149 IKTHWLMREYMLKRPKND------KESMALCVVY 176
           I+T W+M EY L   + +      +++ ALC V+
Sbjct: 122 IRTGWVMHEYRLDETECEPSAYGMQDAYALCRVF 155

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186509710|ref|NP_186970.2| NAC domain containing protein 45 [Arabidopsis thaliana] gi|145651780|gb|ABP88115.1| At3g03200 [Arabidopsis thaliana] gi|332640391|gb|AEE73912.1| NAC domain containing protein 45 [Arabidopsis thaliana]

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHD-FGDGNMYF 89
           G +F PT E LI  YL   ++G        +I EVD+Y+ EP  L  K+     D   YF
Sbjct: 9   GFRFHPTDEELITYYLKRKINGLEIE--LEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYF 66

Query: 90  FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
           FS   +KY  GS   R  KGG+WK TGK   V  +D   GT+++L YY  R         
Sbjct: 67  FSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGR-----APHG 121

Query: 149 IKTHWLMREYMLKRPKND------KESMALCVVY 176
           I+T W+M EY L   + +      +++ ALC V+
Sbjct: 122 IRTGWVMHEYRLDETECEPSAYGMQDAYALCRVF 155

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.355	0.565	0.352	4e-17
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.355	0.461	0.4	2.2e-16
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.312	0.455	0.374	2.8e-16
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.350	0.541	0.348	2.2e-15
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.580	0.785	0.273	2.1e-14
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.324	0.348	0.378	2.3e-14
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.583	0.361	0.296	7.7e-14
TAIR|locus:2176362	340	NAC089 "NAC domain containing	0.437	0.502	0.326	1.1e-13
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.716	0.891	0.287	1.3e-13
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.414	0.511	0.324	1.4e-13

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
 Identities = 54/153 (35%), Positives = 76/153 (49%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAH-DFGDGNMYF 89
             G +F PT E L+  YL   ++G        +I EVD+Y+ EP  L  K+     D   YF
Sbjct:     9 GFRFHPTDEELVNYYLKRKINGQEIE--LDIIPEVDLYKCEPWDLAEKSFLPSRDPEWYF 66

Query:    90 FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
             F    +KY  G    R  +GG+WK TGK   V  +    G +++L YY  R  P+ G   
Sbjct:    67 FGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRA-PQ-G--- 121

Query:   149 IKTHWLMREYMLKR-----PKNDKESMALCVVY 176
             I+T W+M EY L       P + ++S ALC V+
Sbjct:   122 IRTDWVMHEYRLDDKDCDDPSSLQDSYALCRVF 154

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 2.2e-16, P = 2.2e-16
 Identities = 60/150 (40%), Positives = 79/150 (52%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFG-DGNMYF 89
             G +F PT E L+  YL   V+G        +I EVD+Y+ EP  L  K+   G D   YF
Sbjct:     9 GFRFHPTDEELVAYYLDRKVNGQAIE--LEIIPEVDLYKCEPWDLPEKSFLPGNDMEWYF 66

Query:    90 FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
             +S   KKY  GS   R  + G+WK TGK  TV  K    G +++L YY  R  P  G   
Sbjct:    67 YSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMKMGMKKTLVYYRGRA-PH-G--- 121

Query:   149 IKTHWLMREYMLKR-PKND-KESMALCVVY 176
             ++T+W+M EY L   P +  KES ALC V+
Sbjct:   122 LRTNWVMHEYRLTHAPSSSLKESYALCRVF 151

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 49/131 (37%), Positives = 68/131 (51%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G +F PT E LI  YL      S   P+  +I EVD+Y+++P +L  K  +FG+   YFF
Sbjct:    12 GFRFHPTDEELIVYYLRNQTM-SKPCPV-SIIPEVDIYKFDPWQLPEKT-EFGENEWYFF 68

Query:    91 SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
             S  ++KY  G    R A  G+WK TG    +       G +++L +Y  R  P  G   I
Sbjct:    69 SPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGR--PPKG---I 123

Query:   150 KTHWLMREYML 160
             KT W+M EY L
Sbjct:   124 KTDWIMHEYRL 134

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 54/155 (34%), Positives = 78/155 (50%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPI-FPLIQEVDVYQYEPSKLKSKAHDFGDGNMYF 89
             G +F PT E L+ +YL    +     PI  P+I E+D+Y+Y+P  L   A  +G+   YF
Sbjct:    13 GFRFHPTDEELVLMYLCRKCASQ---PIPAPIITELDLYRYDPWDLPDMAL-YGEKEWYF 68

Query:    90 FSRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
             FS   +KY  GS   R A  G+WK    +   G+    G +++L +YS +  P  GEK  
Sbjct:    69 FSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKALVFYSGK--PPNGEK-- 124

Query:   150 KTHWLMREYMLK------RPKNDK--ESMALCVVY 176
              T+W+M EY L       R KN    +   LC +Y
Sbjct:   125 -TNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIY 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 2.1e-14, P = 2.1e-14
 Identities = 73/267 (27%), Positives = 121/267 (45%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G +F PT E L+  YL    +  +     P+I E+D+Y+Y+P +L   A  +G+   YFF
Sbjct:    10 GFRFHPTDEELVMHYLCRKCASQSIA--VPIIAEIDLYKYDPWELPGLAL-YGEKEWYFF 66

Query:    91 SRVQKKYKKGSIRERKAKGGFWKTGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIK 150
             S   +KY  GS   R A  G+WK    +   G     G +++L +Y+ +  PK GEK   
Sbjct:    67 SPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALVFYAGKA-PK-GEK--- 121

Query:   151 THWLMREYML-------KRPKNDK--ESMALCVVYFHGQRDNEDKQNSHPDVEAEGSPTR 201
             T+W+M EY L       ++ KN    +   LC +Y           N     E  G P  
Sbjct:   122 TNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIY-----------NKKGATERRGPP-- 168

Query:   202 NNPALIHWDSNLEAIN--LEETLPPSWSYSNVFAL--SPNCYPLLNSTPNPAAIPYEQPL 257
               P +++ D  +E      E  +PP    ++ FA   + +  P L++T +  +   EQ +
Sbjct:   169 --PPVVYGDEIMEEKPKVTEMVMPPPPQQTSEFAYFDTSDSVPKLHTTDSSCS---EQ-V 222

Query:   258 FFPPNSFQNTTDITFASWGSISPAPNN 284
               P  + +  ++  +  W ++S   NN
Sbjct:   223 VSPEFTSEVQSEPKWKDWSAVSNDNNN 249

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 53/140 (37%), Positives = 76/140 (54%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G +F PT E L+  YL    + S   P+  +I EVD+Y+++P +L +KA  FG+   YFF
Sbjct:    20 GFRFHPTDEELVVHYLKRKAA-SAPLPV-AIIAEVDLYKFDPWELPAKA-SFGEQEWYFF 76

Query:    91 SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGG--TGTERSLTYYSYRHDPKPGEK 147
             S   +KY  G+   R A  G+WK TG    V   DG    G +++L +YS     KP  K
Sbjct:    77 SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYS----GKP-PK 131

Query:   148 PIKTHWLMREYML--KRPKN 165
              +K+ W+M EY L   +P N
Sbjct:   132 GVKSDWIMHEYRLIENKPNN 151

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 74/250 (29%), Positives = 111/250 (44%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAH-DFGDGNMYF 89
             G +F PT E L+  YL   ++G T      +I E+D+Y+ EP  L  K+     D   +F
Sbjct:     9 GFRFHPTDEELVIYYLKRKINGRTIE--LEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFF 66

Query:    90 FSRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP 148
             FS   +KY  GS   R  K G+WK TGK   V       GT+++L YY  R  P  G + 
Sbjct:    67 FSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRA-PH-GSR- 123

Query:   149 IKTHWLMREYMLKRPKNDKES-----MALCVVYFHGQRDNEDKQNSHPDVEAEG---SPT 200
               T W+M EY L+  + D +S      ALC V+      N+ ++  H   + +G   S  
Sbjct:   124 --TDWVMHEYRLEEQECDSKSGIQDAYALCRVFKKSALANKIEEQHHGTKKNKGTTNSEQ 181

Query:   201 RNNPALIHWDSNLEAINLEET-LPPSWSYSNVFALSPNCYPLLNSTPNPAA--IPYEQPL 257
               +   ++ D   E  NLE +  P S     +  L  N    + +  N  +  + ++   
Sbjct:   182 STSSTCLYSDGMYE--NLENSGYPVSPETGGLTQLGNNSSSDMETIENKWSQFMSHDTSF 239

Query:   258 FFPPNSFQNT 267
              FPP S   T
Sbjct:   240 NFPPQSQYGT 249

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2176362 NAC089 "NAC domain containing protein 89" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 62/190 (32%), Positives = 90/190 (47%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G KF PT   LI  YL   + G        +I ++++Y +EP  L  K+    D   +FF
Sbjct:    24 GFKFSPTDVELISYYLKRKMDGLERS--VEVIPDLEIYNFEPWDLPDKSIVKSDSEWFFF 81

Query:    91 SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
                 KKY  GS   R  K G+WK TGK   V+      GT+R+L ++  R  PK GE+  
Sbjct:    82 CARGKKYPHGSQNRRATKMGYWKATGKERDVKSGSEVIGTKRTLVFHIGRA-PK-GER-- 137

Query:   150 KTHWLMREYMLKRPKNDKESMALCVV-----YFHGQRDNEDKQNSHPDVEAE---GSPTR 201
              T W+M EY +K    D ++M +C V     Y  G      K NS  +  A+   G+ + 
Sbjct:   138 -TDWIMHEYCVKGVSLD-DAMVVCRVRRNKEYNSGTSQKAPKPNSSAEKHAKVQNGATSS 195

Query:   202 NNPALIHWDS 211
              +P+   WD+
Sbjct:   196 GSPS--DWDN 203

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 95/330 (28%), Positives = 144/330 (43%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G +F PT E LI  YL   VS    G     + +VD+ + EP  L +KA   G+   YFF
Sbjct:     8 GFRFHPTDEELITHYLCRKVSDI--GFTGKAVVDVDLNKCEPWDLPAKA-SMGEKEWYFF 64

Query:    91 SRVQKKYKKGSIRERKAKGGFWKT-GKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
             S+  +KY  G    R  + G+WKT GK   +       G +++L +Y  R  PK GEK  
Sbjct:    65 SQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRA-PK-GEK-- 120

Query:   150 KTHWLMREYML--KRPKN--DKESMALCVVYFHG----QRDNEDKQNSHPDVEAEGSPTR 201
              ++W+M EY L  K+P N  +KE   +C V+       +   +  Q+S P     GSP  
Sbjct:   121 -SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSF---GSPCD 176

Query:   202 NNPALIHWDSNLEAI-NLEETLPPSWSYSN-VFALSP-NCYPLLNSTPNPAAIPYEQPLF 258
              N ++ +   +++ + NL      +  Y+N +   S  N Y   N+T + A +       
Sbjct:   177 ANSSMANEFEDIDELPNLNSN-SSTIDYNNHIHQYSQRNVYSEDNTT-STAGL------- 227

Query:   259 FPPNSFQNTTDITFASWGS--ISP--APNNNFPLYSSNLNPAASTPER--PSSN--SFQ- 309
                N   N       SW +  + P  +P N+  L +  +  + S P+   PS N  S Q 
Sbjct:   228 ---NMNMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQ 284

Query:   310 ---NMINMMGVSSAA---PADSIINTPNNW 333
                NMI     SS     P +   N  + W
Sbjct:   285 GVSNMIQNASSSSQVQPQPQEEAFNMDSIW 314

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 58/179 (32%), Positives = 90/179 (50%)

Query:    31 GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
             G +F PT E L+  YL    +G  D  +  LI E+D+Y+++P  L SKA  FG+   YFF
Sbjct:    17 GFRFYPTDEELMVEYLCRKAAGH-DFSL-QLIAEIDLYKFDPWVLPSKAL-FGEKEWYFF 73

Query:    91 SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
             S   +KY  GS   R A  G+WK TG    +  +    G +++L +Y  +  PK G K  
Sbjct:    74 SPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKA-PK-GTK-- 129

Query:   150 KTHWLMREYMLKRP--KNDKESM---ALCVVYFHGQRDNEDKQNSHPDVEAEGSPTRNN 203
              T+W+M EY L  P  +N    +    LC +Y   ++    ++ ++ ++   G    NN
Sbjct:   130 -TNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY---KKQTSAQKQAYNNLMTSGREYSNN 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.6__1724__AT5G17260.1 annotation not avaliable (476 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	391
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-26

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  102 bits (257), Expect = 1e-26
 Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL   V G    P+  +I EVD+Y++EP  L       GD   YFF
Sbjct: 4   GFRFHPTDEELVVYYLKRKVLGKPL-PLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFF 62

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGT-GTERSLTYYSYRHDPKPGEKP 148
           S   +KY  GS   R    G+WK TGK   V  K G   G +++L +Y  R       K 
Sbjct: 63  SPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGR-----APKG 117

Query: 149 IKTHWLMREY 158
            KT W+M EY
Sbjct: 118 EKTDWVMHEY 127

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	391
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=8.3e-42  Score=294.07  Aligned_cols=127  Identities=38%  Similarity=0.663  Sum_probs=94.3

Q ss_pred             CCCcceecCChHHHHHHHHHHhhcCCCCCCCCCceeeccCCCCCccccccccccCCCceEEEEecccccccCCCcceecc
Q 016337           28 KVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIRERKA  107 (391)
Q Consensus        28 LPPGfRF~PTDEELV~~YL~rKv~G~pl~~~~~~I~evDVY~~ePWdLP~~~~~~gd~eWYFFs~r~rKy~nG~R~nRat  107 (391)
                      |||||||+|||||||.+||++|+.|.+++ ...+|+++|||++|||+|++.... ++++||||+++++++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~-~~~~i~~~Diy~~~P~~L~~~~~~-~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLP-CEDVIHDVDIYSAHPWELPAKFKG-GDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHC-S-CHSEE--GGGS-GGGCHHHSSS--SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCC-cccceeecccCccChHHhhhhccC-CCceEEEEEecccccCCcccccccc
Confidence            89999999999999999999999999972 337899999999999999953333 6679999999999999999999999


Q ss_pred             CCceEe-cCCceeeec-CCCeEEEEEEeeeecccCCCCCCCCCcccCeEEEEEEeC
Q 016337          108 KGGFWK-TGKCNTVRG-KDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLK  161 (391)
Q Consensus       108 ggGyWK-tG~~K~I~~-~G~vIG~KKtLvFY~gr~~pk~G~~~~KTgWvMhEYrL~  161 (391)
                      ++|+|| +|+++.|.+ +|.+||+|++|+||.++. + ++   .+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~-~-~~---~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKS-P-NG---KKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESST-T-S----EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccC-C-CC---CcCCeEEEEEEeC
Confidence            999999 999999999 999999999999998766 4 67   8999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	391
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-12
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-12
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-11

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G        LI E+D+Y+++P  L +KA  FG+   YFF
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFS--LQLIAEIDLYKFDPWVLPNKAL-FGEKEWYFF 79
Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R A  G+WK TG    +  +    G +++L +Y  +       K  
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGK-----APKGT 134
Query: 150 KTHWLMREYMLKRPKNDKESM-----ALCVVY 176
           KT+W+M EY L  P     S       LC +Y
Sbjct: 135 KTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 166

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G        LI E+D+Y+++P  L +KA  FG+   YFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFS--LQLIAEIDLYKFDPWVLPNKAL-FGEKEWYFF 76
Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R A  G+WK TG    +  +    G +++L +Y  +       K  
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGK-----APKGT 131
Query: 150 KTHWLMREYMLKRPKNDKESM-----ALCVVY 176
           KT+W+M EY L  P     S       LC +Y
Sbjct: 132 KTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT + L+  YL    +G    P+ P+I EVD+Y+++P  L  +A  FG    YFF
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRL-PV-PIIAEVDLYKFDPWDLPERAL-FGAREWYFF 74
Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKP- 148
           +   +KY  GS   R A  G+WK TG    V  +    G +++L +Y+       G+ P 
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYA-------GKAPR 127
Query: 149 -IKTHWLMREYML 160
            +KT W+M EY L
Sbjct: 128 GVKTDWIMHEYRL 140

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	391
1ut7_A	171	No apical meristem protein; transcription regulati	2e-24
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	9e-24

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G        LI E+D+Y+++P  L +KA  FG+   YFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKFDPWVLPNKA-LFGEKEWYFF 76

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R A  G+WK TG    +  +    G +++L +Y  +       K  
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGK-----APKGT 131

Query: 150 KTHWLMREYML-----KRPKNDKESMALCVVY 176
           KT+W+M EY L     +      +   LC +Y
Sbjct: 132 KTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 95.9 bits (239), Expect = 9e-24
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT + L+  YL    +G       P+I EVD+Y+++P  L  +A  FG    YFF
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYKFDPWDLPERAL-FGAREWYFF 74

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           +   +KY  GS   R A  G+WK TG    V  +    G +++L +Y+ +       + +
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGK-----APRGV 129

Query: 150 KTHWLMREYML----------KRPKNDKESMALCVVY 176
           KT W+M EY L          K+     +   LC +Y
Sbjct: 130 KTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	391
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.2e-53  Score=388.60  Aligned_cols=149  Identities=32%  Similarity=0.629  Sum_probs=133.7

Q ss_pred             cCCCCCCcceecCChHHHHHHHHHHhhcCCCCCCCCCceeeccCCCCCccccccccccCCCceEEEEecccccccCCCcc
Q 016337           24 ETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIR  103 (391)
Q Consensus        24 ~~~~LPPGfRF~PTDEELV~~YL~rKv~G~pl~~~~~~I~evDVY~~ePWdLP~~~~~~gd~eWYFFs~r~rKy~nG~R~  103 (391)
                      .++.|||||||+|||||||.|||++|+.|.++  +..+|+++|||++|||+||+.+.. ++++|||||++++||++|.|+
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~--~~~~I~evDvy~~~Pw~Lp~~~~~-g~~ewYFFs~r~~ky~~g~R~   87 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRL--PVPIIAEVDLYKFDPWDLPERALF-GAREWYFFTPRDRKYPNGSRP   87 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCC--SSSCCEECCGGGSCGGGSGGGCSS-CSSEEEEEEECCC-----CCS
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCC--CcCeeeecccccCCchhhhhhhcc-CCceEEEEeccccccCCCCCc
Confidence            46799999999999999999999999999999  778999999999999999998776 778999999999999999999


Q ss_pred             eeccCCceEe-cCCceeeecCCCeEEEEEEeeeecccCCCCCCCCCcccCeEEEEEEeCCCCC----------CCCCeEE
Q 016337          104 ERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKN----------DKESMAL  172 (391)
Q Consensus       104 nRatggGyWK-tG~~K~I~~~G~vIG~KKtLvFY~gr~~pk~G~~~~KTgWvMhEYrL~~~~~----------~~~d~VL  172 (391)
                      +|+|++|||| ||++|.|..+|.+||+||+|+||.|++ | +|   .||+|+||||+|..+..          ..++|||
T Consensus        88 nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~-p-~g---~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVl  162 (174)
T 3ulx_A           88 NRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKA-P-RG---VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVL  162 (174)
T ss_dssp             CEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESST-T-SC---EEEEEEEEEEEECSCC-----------CCSSEEE
T ss_pred             eeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCC-C-CC---CcCCeEEEEEEeCCCCCcccccccCCCCCCCEEE
Confidence            9999999999 999999999899999999999999998 7 88   99999999999987642          3579999


Q ss_pred             EEEEEecC
Q 016337          173 CVVYFHGQ  180 (391)
Q Consensus       173 CRIykK~r  180 (391)
                      ||||+|+.
T Consensus       163 Crvf~K~~  170 (174)
T 3ulx_A          163 CRLYNKKN  170 (174)
T ss_dssp             EEEEESCC
T ss_pred             EEEEEcCC
Confidence            99998853

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.1e-53  Score=385.82  Aligned_cols=150  Identities=33%  Similarity=0.624  Sum_probs=130.9

Q ss_pred             cCCCCCCcceecCChHHHHHHHHHHhhcCCCCCCCCCceeeccCCCCCccccccccccCCCceEEEEecccccccCCCcc
Q 016337           24 ETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKGSIR  103 (391)
Q Consensus        24 ~~~~LPPGfRF~PTDEELV~~YL~rKv~G~pl~~~~~~I~evDVY~~ePWdLP~~~~~~gd~eWYFFs~r~rKy~nG~R~  103 (391)
                      ..+.|||||||+|||||||.|||++|+.|.++  +..+|+++|||++|||+||+.+.. ++++||||+++++||++|.|+
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~--~~~~I~e~Diy~~~Pw~Lp~~~~~-g~~ewyFFs~r~~k~~~g~R~   89 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDF--SLQLIAEIDLYKFDPWVLPNKALF-GEKEWYFFSPRDRKYPNGSRP   89 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCC--SSCCSEECCGGGSCGGGHHHHSSS-CSSEEEEEEECCC-------C
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCC--CCCeEeecccccCChhHhhchhhc-CCccEEEEeccccccCCCCcc
Confidence            46799999999999999999999999999999  788999999999999999998765 789999999999999999999


Q ss_pred             eeccCCceEe-cCCceeeecCCCeEEEEEEeeeecccCCCCCCCCCcccCeEEEEEEeCCCCC-----CCCCeEEEEEEE
Q 016337          104 ERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKN-----DKESMALCVVYF  177 (391)
Q Consensus       104 nRatggGyWK-tG~~K~I~~~G~vIG~KKtLvFY~gr~~pk~G~~~~KTgWvMhEYrL~~~~~-----~~~d~VLCRIyk  177 (391)
                      +|+|++|||| ||++|.|..++.+||+||+|+||.|++ | +|   .||+|+||||+|.....     ..++|||||||+
T Consensus        90 ~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~-p-~g---~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~  164 (171)
T 1ut7_A           90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKA-P-KG---TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYK  164 (171)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESST-T-SC---EEEEEEEEEEEECCCC--------CCEEEEEEEE
T ss_pred             cccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcC-C-CC---CcCCeEEEEEEcCCCccccCcccCCCEEEEEEEE
Confidence            9999999999 999999999889999999999999998 7 88   99999999999987642     468999999999


Q ss_pred             ecCC
Q 016337          178 HGQR  181 (391)
Q Consensus       178 K~r~  181 (391)
                      |+..
T Consensus       165 k~~~  168 (171)
T 1ut7_A          165 KQSS  168 (171)
T ss_dssp             CC--
T ss_pred             cCCC
Confidence            8753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	391
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-24

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 95.8 bits (238), Expect = 3e-24
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 14/152 (9%)

Query: 31  GIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFF 90
           G +F PT E L+  YL    +G        LI E+D+Y+++P  L +KA   G+   YFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGY--DFSLQLIAEIDLYKFDPWVLPNKALF-GEKEWYFF 76

Query: 91  SRVQKKYKKGSIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPI 149
           S   +KY  GS   R A  G+WK TG    +  +    G +++L +Y  +       K  
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGK-----APKGT 131

Query: 150 KTHWLMREYML-----KRPKNDKESMALCVVY 176
           KT+W+M EY L     +      +   LC +Y
Sbjct: 132 KTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	391
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-51  Score=366.47  Aligned_cols=151  Identities=33%  Similarity=0.616  Sum_probs=130.2

Q ss_pred             CCccCCCCCCcceecCChHHHHHHHHHHhhcCCCCCCCCCceeeccCCCCCccccccccccCCCceEEEEecccccccCC
Q 016337           21 RDWETWKKVDGIKFKPTAEVLIFVYLAGMVSGSTDGPIFPLIQEVDVYQYEPSKLKSKAHDFGDGNMYFFSRVQKKYKKG  100 (391)
Q Consensus        21 ~~~~~~~LPPGfRF~PTDEELV~~YL~rKv~G~pl~~~~~~I~evDVY~~ePWdLP~~~~~~gd~eWYFFs~r~rKy~nG  100 (391)
                      +..+++.|||||||+|||||||.|||++|+.|.++  +..+|+++|||++|||+||+.... ++++||||+++++++++|
T Consensus        10 ~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l--~~~~I~~~Dvy~~~Pw~Lp~~~~~-~~~~wyFft~~~~k~~~g   86 (166)
T d1ut7a_          10 DPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDF--SLQLIAEIDLYKFDPWVLPNKALF-GEKEWYFFSPRDRKYPNG   86 (166)
T ss_dssp             --CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCC--SSCCSEECCGGGSCGGGHHHHSSS-CSSEEEEEEECCC-----
T ss_pred             CccccccCCCccccCCCcHHHHHHHHHHHHcCCCC--CcccceeccCCcCChhhccchhcc-CcceEEEEeeeccccCCC
Confidence            34578999999999999999999999999999999  788999999999999999988765 778999999999999999


Q ss_pred             CcceeccCCceEe-cCCceeeecCCCeEEEEEEeeeecccCCCCCCCCCcccCeEEEEEEeCCCCC-----CCCCeEEEE
Q 016337          101 SIRERKAKGGFWK-TGKCNTVRGKDGGTGTERSLTYYSYRHDPKPGEKPIKTHWLMREYMLKRPKN-----DKESMALCV  174 (391)
Q Consensus       101 ~R~nRatggGyWK-tG~~K~I~~~G~vIG~KKtLvFY~gr~~pk~G~~~~KTgWvMhEYrL~~~~~-----~~~d~VLCR  174 (391)
                      .|.+|++++|+|| +|+++.|.++|.+||+||+|+||+++. + ++   .+|+|+||||+|.+...     ..++|||||
T Consensus        87 ~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~-~-~~---~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCr  161 (166)
T d1ut7a_          87 SRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKA-P-KG---TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (166)
T ss_dssp             --CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESST-T-SC---EEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             CccccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCC-C-CC---CccCeEEEEEecCCcccccCccccCCEEEEE
Confidence            9999999999999 999999998999999999999999998 6 78   89999999999987543     457899999


Q ss_pred             EEEec
Q 016337          175 VYFHG  179 (391)
Q Consensus       175 IykK~  179 (391)
                      ||+|+
T Consensus       162 I~~Kk  166 (166)
T d1ut7a_         162 IYKKQ  166 (166)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99874