Citrus Sinensis ID: 016374

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
ccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccc
ccEEEEcccccccccHHHcEEEHHHHHHHEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHccccHHHHEEHHccccHHHHHHHHccHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHcccHHHcccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHcc
msiailpmsaefnwnpatvgliqssFFWGYLLTQIAggiwadtvggKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIgegvampamNNILSKWVPVAERSRSLALVYSGMYlgsvtglafspflihrfgwpsvfysfgslGTVWFTVWLSkahsspaedpqlrpaeKKLIVSscaskepvktipwglilskppvWALIVSHFCHnwgtfilltwmptyynqVLHFNltesglfcvlpwLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIgflgpaffltqlshvdspAMAVLCMACsqgtdafsqsglysnhqdiaprySGVLLGLSNTAGVLAGVFGTAATGYilqhgswddvFKVSVGLYLVGTAVWNLFSTGEKVVD
MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHsspaedpqlrpAEKKLIVSscaskepvktipwglilSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWnlfstgekvvd
MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
***AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS*******************IVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST******
MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP*********************GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV*
MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA**********RPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
*SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK***
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiii
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooo
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MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVVD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query390 2.2.26 [Sep-21-2011]
Q9SDI4529 Probable anion transporte yes no 1.0 0.737 0.894 0.0
O82390512 Sodium-dependent phosphat yes no 1.0 0.761 0.871 0.0
Q8GX78541 Probable anion transporte no no 1.0 0.720 0.828 0.0
Q652N5591 Probable anion transporte no no 1.0 0.659 0.835 0.0
Q7XJR2512 Probable anion transporte no no 0.989 0.753 0.420 1e-83
Q66GI9533 Probable anion transporte no no 0.994 0.727 0.419 3e-83
Q8W0H5519 Probable anion transporte no no 0.994 0.747 0.404 6e-83
Q53WP9535 Probable anion transporte no no 1.0 0.728 0.391 1e-77
Q3E9A0517 Probable anion transporte no no 0.971 0.733 0.420 2e-77
Q9NRA2495 Sialin OS=Homo sapiens GN yes no 0.964 0.759 0.376 9e-69
>sp|Q9SDI4|PHT41_ORYSJ Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1 Back     alignment and function desciption
 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/390 (89%), Positives = 360/390 (92%)

Query: 1   MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 60
           MSIAILPMSAEF WNP TVGLIQSSFFWGYLLTQIAGGIWADTVGGK VLGFGV+WWSIA
Sbjct: 140 MSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIA 199

Query: 61  TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 120
           TALTP AAKLGLPFLLV R FMG+GEGVAMPAMNNILSKWVPV+ERSRSLALVYSGMYLG
Sbjct: 200 TALTPFAAKLGLPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLG 259

Query: 121 SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS 180
           SVTGLAFSP LIH FGWPSVFYSFGSLG  WF+ W SKA+SSP EDP +   EKKLI S 
Sbjct: 260 SVTGLAFSPLLIHNFGWPSVFYSFGSLGVFWFSTWASKAYSSPLEDPGISAEEKKLITSQ 319

Query: 181 CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 240
               EPVK IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL FNLTESGLF
Sbjct: 320 TTGGEPVKEIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLF 379

Query: 241 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 300
           CVLPWLTMA SAN GGWIADTLVS+GLSVTTVRKIMQSIGFLGPAFFLTQLSH+DSPAMA
Sbjct: 380 CVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMA 439

Query: 301 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360
           VLCMACSQGTDAFSQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGVFGTAATGYILQHGS
Sbjct: 440 VLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGS 499

Query: 361 WDDVFKVSVGLYLVGTAVWNLFSTGEKVVD 390
           WDDVFKVSV LYLVGT VWNLFSTGEK++D
Sbjct: 500 WDDVFKVSVVLYLVGTLVWNLFSTGEKIID 529
Probable anion transporter.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|O82390|ANTR1_ARATH Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GX78|ANTR2_ARATH Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1 Back     alignment and function description
>sp|Q652N5|PHT44_ORYSJ Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1 Back     alignment and function description
>sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2 Back     alignment and function description
>sp|Q66GI9|ANTR4_ARATH Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1 Back     alignment and function description
>sp|Q8W0H5|PHT43_ORYSJ Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1 Back     alignment and function description
>sp|Q53WP9|PHT42_ORYSJ Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1 Back     alignment and function description
>sp|Q3E9A0|ANTR6_ARATH Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
255569283 530 Sodium-dependent phosphate transport pro 1.0 0.735 0.923 0.0
224054558431 predicted protein [Populus trichocarpa] 1.0 0.904 0.930 0.0
224104305 520 predicted protein [Populus trichocarpa] 1.0 0.75 0.925 0.0
449515105 528 PREDICTED: sodium-dependent phosphate tr 1.0 0.738 0.920 0.0
356566171395 PREDICTED: probable anion transporter 1, 1.0 0.987 0.912 0.0
356539597 511 PREDICTED: sodium-dependent phosphate tr 1.0 0.763 0.907 0.0
225434656 514 PREDICTED: sodium-dependent phosphate tr 1.0 0.758 0.915 0.0
358346124 516 Sodium-dependent phosphate transport pro 1.0 0.755 0.889 0.0
388500962 516 unknown [Medicago truncatula] 1.0 0.755 0.887 0.0
115435982 529 Os01g0279700 [Oryza sativa Japonica Grou 1.0 0.737 0.894 0.0
>gi|255569283|ref|XP_002525609.1| Sodium-dependent phosphate transport protein, putative [Ricinus communis] gi|223535045|gb|EEF36727.1| Sodium-dependent phosphate transport protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/390 (92%), Positives = 376/390 (96%)

Query: 1   MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 60
           MSIAILPMSAE+NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK VLGFGVVWWSIA
Sbjct: 141 MSIAILPMSAEYNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKLVLGFGVVWWSIA 200

Query: 61  TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 120
           TALTPVAAK GLPFLLVVRVFMGIGEGVAMPAM NILSKWVPV+ERSRSLALVYSGMYLG
Sbjct: 201 TALTPVAAKFGLPFLLVVRVFMGIGEGVAMPAMTNILSKWVPVSERSRSLALVYSGMYLG 260

Query: 121 SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS 180
           SVTGLAFSPFLIH+FGWPSVFYSFGSLGT+WF VWL+KA+SSP +DPQLRP EK+LI+++
Sbjct: 261 SVTGLAFSPFLIHQFGWPSVFYSFGSLGTIWFAVWLNKAYSSPLDDPQLRPEEKQLIIAN 320

Query: 181 CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 240
            A KEPVK IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL F+LTESGL 
Sbjct: 321 SACKEPVKVIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFDLTESGLV 380

Query: 241 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 300
           CVLPWLTMAFSANLGGWIADTLVSKG SVTTVRKIMQ+IGFLGPAFFLTQLSH++SPAMA
Sbjct: 381 CVLPWLTMAFSANLGGWIADTLVSKGYSVTTVRKIMQTIGFLGPAFFLTQLSHINSPAMA 440

Query: 301 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360
           VLCM CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS
Sbjct: 441 VLCMTCSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 500

Query: 361 WDDVFKVSVGLYLVGTAVWNLFSTGEKVVD 390
           WDDVFKVSVGLYLVGT VWNLFSTGEK+VD
Sbjct: 501 WDDVFKVSVGLYLVGTVVWNLFSTGEKIVD 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224054558|ref|XP_002298320.1| predicted protein [Populus trichocarpa] gi|222845578|gb|EEE83125.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224104305|ref|XP_002313389.1| predicted protein [Populus trichocarpa] gi|222849797|gb|EEE87344.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449515105|ref|XP_004164590.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356566171|ref|XP_003551308.1| PREDICTED: probable anion transporter 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356539597|ref|XP_003538283.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|225434656|ref|XP_002279594.1| PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Vitis vinifera] gi|297745933|emb|CBI15989.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|358346124|ref|XP_003637121.1| Sodium-dependent phosphate transport protein [Medicago truncatula] gi|355503056|gb|AES84259.1| Sodium-dependent phosphate transport protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|388500962|gb|AFK38547.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|115435982|ref|NP_001042749.1| Os01g0279700 [Oryza sativa Japonica Group] gi|75265658|sp|Q9SDI4.1|PHT41_ORYSJ RecName: Full=Probable anion transporter 1, chloroplastic; AltName: Full=Phosphate transporter 4;1; Flags: Precursor gi|6498428|dbj|BAA87831.1| putative solute carrier family 17 (anion/sugar transporter), member 5 [Oryza sativa Japonica Group] gi|11138056|dbj|BAB17729.1| putative Na+-dependen inorganic phosphate cotransporter [Oryza sativa Japonica Group] gi|113532280|dbj|BAF04663.1| Os01g0279700 [Oryza sativa Japonica Group] gi|215695348|dbj|BAG90539.1| unnamed protein product [Oryza sativa Japonica Group] gi|215712323|dbj|BAG94450.1| unnamed protein product [Oryza sativa Japonica Group] gi|218187982|gb|EEC70409.1| hypothetical protein OsI_01403 [Oryza sativa Indica Group] gi|222618204|gb|EEE54336.1| hypothetical protein OsJ_01311 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
TAIR|locus:2060694512 PHT4;1 "AT2G29650" [Arabidopsi 1.0 0.761 0.871 2.9e-190
TAIR|locus:2126066541 ANTR2 "AT4G00370" [Arabidopsis 1.0 0.720 0.828 1.4e-181
TAIR|locus:2065615512 PHT4;2 "AT2G38060" [Arabidopsi 0.989 0.753 0.420 1.5e-83
TAIR|locus:2149199517 PHT4;5 "phosphate transporter 0.979 0.738 0.416 1.2e-79
UNIPROTKB|Q9NRA2495 SLC17A5 "Sialin" [Homo sapiens 0.964 0.759 0.376 4.8e-71
UNIPROTKB|Q5ZL94484 SLC17A5 "Uncharacterized prote 0.964 0.776 0.379 1.3e-70
MGI|MGI:1924105495 Slc17a5 "solute carrier family 0.964 0.759 0.379 7e-70
UNIPROTKB|E2R8R4495 SLC17A5 "Uncharacterized prote 0.961 0.757 0.370 1.1e-69
UNIPROTKB|E1B7R3495 SLC17A5 "Uncharacterized prote 0.964 0.759 0.369 1.8e-69
ZFIN|ZDB-GENE-060929-1158489 slc17a5 "solute carrier family 0.958 0.764 0.385 6.3e-69
TAIR|locus:2060694 PHT4;1 "AT2G29650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1844 (654.2 bits), Expect = 2.9e-190, P = 2.9e-190
 Identities = 340/390 (87%), Positives = 360/390 (92%)

Query:     1 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 60
             MSIAILPMSAE+ WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK VLGFGV+WWSIA
Sbjct:   123 MSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVIWWSIA 182

Query:    61 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 120
             T LTPVAAKLGLP+LLVVR FMG+GEGVAMPAMNNILSKWVPV ERSRSLALVYSGMYLG
Sbjct:   183 TILTPVAAKLGLPYLLVVRAFMGVGEGVAMPAMNNILSKWVPVQERSRSLALVYSGMYLG 242

Query:   121 SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS 180
             SVTGLAFSPFLIH+FGWPSVFYSFGSLGTVW T+WL+KA SSP EDP L P E+KLI  +
Sbjct:   243 SVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWLTLWLTKAESSPLEDPTLLPEERKLIADN 302

Query:   181 CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLF 240
             CASKEPVK+IPW LILSKPPVWALI  HFCHNWGTFILLTWMPTYY+QVL FNL ESGL 
Sbjct:   303 CASKEPVKSIPWRLILSKPPVWALISCHFCHNWGTFILLTWMPTYYHQVLKFNLMESGLL 362

Query:   241 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA 300
              V PW+TMA SAN GGWIADTLVS+G SVT VRKIMQ+IGFLGPAFFLTQL H+DSP MA
Sbjct:   363 SVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMA 422

Query:   301 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 360
             VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGV GTAATG+ILQHGS
Sbjct:   423 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGS 482

Query:   361 WDDVFKVSVGLYLVGTAVWNLFSTGEKVVD 390
             WDDVF +SVGLYLVGT +WNLFSTGEK++D
Sbjct:   483 WDDVFTISVGLYLVGTVIWNLFSTGEKIID 512
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009624 "response to nematode" evidence=IEP
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009579 "thylakoid" evidence=IDA
GO:0030504 "inorganic diphosphate transmembrane transporter activity" evidence=IGI
GO:0009416 "response to light stimulus" evidence=IEP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2126066 ANTR2 "AT4G00370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065615 PHT4;2 "AT2G38060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149199 PHT4;5 "phosphate transporter 4;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NRA2 SLC17A5 "Sialin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZL94 SLC17A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1924105 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-1158 slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SDI4PHT41_ORYSJNo assigned EC number0.89481.00.7372yesno
O82390ANTR1_ARATHNo assigned EC number0.87171.00.7617yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.I.976.1
hypothetical protein (431 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_III000318
hypothetical protein (522 aa)
  •     0.424

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
TIGR00894465 TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph 2e-67
TIGR00893399 TIGR00893, 2A0114, D-galactonate transporter 2e-40
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 5e-37
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-22
TIGR00895398 TIGR00895, 2A0115, benzoate transport 6e-18
TIGR00881379 TIGR00881, 2A0104, phosphoglycerate transporter fa 1e-16
COG2271448 COG2271, UhpC, Sugar phosphate permease [Carbohydr 8e-11
COG2814394 COG2814, AraJ, Arabinose efflux permease [Carbohyd 1e-10
PRK11551406 PRK11551, PRK11551, putative 3-hydroxyphenylpropio 5e-10
COG2223417 COG2223, NarK, Nitrate/nitrite transporter [Inorga 4e-09
TIGR00880141 TIGR00880, 2_A_01_02, Multidrug resistance protein 3e-06
TIGR00890377 TIGR00890, 2A0111, oxalate/formate antiporter fami 5e-05
PRK12307426 PRK12307, PRK12307, putative sialic acid transport 3e-04
TIGR02332412 TIGR02332, HpaX, 4-hydroxyphenylacetate permease 4e-04
TIGR00886366 TIGR00886, 2A0108, nitrite extrusion protein (nitr 0.001
pfam07690 346 pfam07690, MFS_1, Major Facilitator Superfamily 0.004
>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information 
 Score =  219 bits (561), Expect = 2e-67
 Identities = 120/384 (31%), Positives = 185/384 (48%), Gaps = 8/384 (2%)

Query: 11  EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 70
            F W+ A  GLI SS F+G ++ QI  G  A     K  +G G+   S+ + + P AA  
Sbjct: 70  NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG 129

Query: 71  GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 130
           G+  ++  RV  G+ +G   PA + I+ KW P  ERSR L +  SG  LG+   L  S +
Sbjct: 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGW 189

Query: 131 LI-HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEPV- 187
           L     GWP +FY FG +G  W  +W       P+  P +   EKK I SS    K    
Sbjct: 190 LCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTR 249

Query: 188 KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLT 247
           +++P   I    PVWA+  + F H W   IL T++PT+ + VL  +  E+GL   LP+L 
Sbjct: 250 QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF 309

Query: 248 MAFSANLGGWIADTLVSKG-LSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 306
               +   G++AD L S   LS+T  RKI   IG LGP  F   L ++ +     + +  
Sbjct: 310 AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILT 369

Query: 307 -SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 365
            +    +   +G+  N  D+APR+ G + G++   G + G+  +   G IL   S +   
Sbjct: 370 LANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWL 429

Query: 366 KVSV---GLYLVGTAVWNLFSTGE 386
            V +    + ++    + +F + E
Sbjct: 430 IVFLIMAFVNILCVIFYLIFGSAE 453

[Transport and binding proteins, Anions]. Length = 465
>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein Back     alignment and domain information
>gnl|CDD|225180 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|236927 PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein Back     alignment and domain information
>gnl|CDD|233171 TIGR00890, 2A0111, oxalate/formate antiporter family transporter Back     alignment and domain information
>gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional Back     alignment and domain information
>gnl|CDD|131385 TIGR02332, HpaX, 4-hydroxyphenylacetate permease Back     alignment and domain information
>gnl|CDD|233170 TIGR00886, 2A0108, nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 390
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 100.0
PRK11663434 regulatory protein UhpC; Provisional 100.0
PRK03545390 putative arabinose transporter; Provisional 100.0
TIGR00893399 2A0114 d-galactonate transporter. 100.0
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 100.0
KOG2532466 consensus Permease of the major facilitator superf 100.0
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 100.0
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 100.0
PRK09705393 cynX putative cyanate transporter; Provisional 100.0
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 100.0
PRK10091382 MFS transport protein AraJ; Provisional 100.0
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 100.0
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 100.0
PRK14995495 methyl viologen resistance protein SmvA; Provision 100.0
PRK10213394 nepI ribonucleoside transporter; Reviewed 100.0
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 100.0
PRK03699394 putative transporter; Provisional 100.0
PRK15402406 multidrug efflux system translocase MdfA; Provisio 100.0
TIGR00881379 2A0104 phosphoglycerate transporter family protein 100.0
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 100.0
PLN00028476 nitrate transmembrane transporter; Provisional 100.0
TIGR00897402 2A0118 polyol permease family. This family of prot 100.0
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 100.0
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 100.0
TIGR00891405 2A0112 putative sialic acid transporter. 100.0
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 100.0
PRK10642490 proline/glycine betaine transporter; Provisional 100.0
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 100.0
PRK12307426 putative sialic acid transporter; Provisional 100.0
PRK15403413 multidrug efflux system protein MdtM; Provisional 100.0
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 100.0
PRK03633381 putative MFS family transporter protein; Provision 100.0
TIGR00900365 2A0121 H+ Antiporter protein. 100.0
PRK10504471 putative transporter; Provisional 100.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 100.0
TIGR00892455 2A0113 monocarboxylate transporter 1. 100.0
PRK05122399 major facilitator superfamily transporter; Provisi 100.0
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 100.0
PRK12382392 putative transporter; Provisional 100.0
PRK11195393 lysophospholipid transporter LplT; Provisional 100.0
PRK09874408 drug efflux system protein MdtG; Provisional 100.0
PRK09952438 shikimate transporter; Provisional 100.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 100.0
PRK10489417 enterobactin exporter EntS; Provisional 100.0
PRK15075434 citrate-proton symporter; Provisional 100.0
PRK11043401 putative transporter; Provisional 100.0
TIGR00898505 2A0119 cation transport protein. 100.0
PRK10133438 L-fucose transporter; Provisional 100.0
PRK10473392 multidrug efflux system protein MdtL; Provisional 100.0
PRK11652394 emrD multidrug resistance protein D; Provisional 100.0
PRK11646400 multidrug resistance protein MdtH; Provisional 100.0
PRK15011393 sugar efflux transporter B; Provisional 100.0
PRK03893496 putative sialic acid transporter; Provisional 100.0
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 100.0
TIGR00896355 CynX cyanate transporter. This family of proteins 100.0
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 100.0
TIGR00902382 2A0127 phenyl proprionate permease family protein. 100.0
PRK10054395 putative transporter; Provisional 100.0
TIGR00895398 2A0115 benzoate transport. 100.0
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 100.0
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 100.0
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 100.0
PRK11010491 ampG muropeptide transporter; Validated 100.0
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 100.0
KOG1330493 consensus Sugar transporter/spinster transmembrane 100.0
PRK11902402 ampG muropeptide transporter; Reviewed 100.0
PRK09528420 lacY galactoside permease; Reviewed 100.0
KOG3764464 consensus Vesicular amine transporter [Intracellul 100.0
KOG2533495 consensus Permease of the major facilitator superf 100.0
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 100.0
TIGR00889418 2A0110 nucleoside transporter. This family of prot 100.0
COG2807395 CynX Cyanate permease [Inorganic ion transport and 100.0
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 100.0
TIGR00901356 2A0125 AmpG-related permease. 99.98
KOG0569485 consensus Permease of the major facilitator superf 99.98
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.97
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.97
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.97
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.97
TIGR00805 633 oat sodium-independent organic anion transporter. 99.97
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.97
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.97
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.97
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.97
KOG2615451 consensus Permease of the major facilitator superf 99.97
KOG0254513 consensus Predicted transporter (major facilitator 99.96
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.96
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.95
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.95
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.95
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.94
PTZ00207591 hypothetical protein; Provisional 99.94
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.94
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.94
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.93
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.93
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.93
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.93
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.92
PRK09669444 putative symporter YagG; Provisional 99.92
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.92
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.92
PF13347428 MFS_2: MFS/sugar transport protein 99.91
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.9
PRK09848448 glucuronide transporter; Provisional 99.89
PRK10429473 melibiose:sodium symporter; Provisional 99.88
COG2270438 Permeases of the major facilitator superfamily [Ge 99.88
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.88
PRK11462460 putative transporter; Provisional 99.86
COG2211467 MelB Na+/melibiose symporter and related transport 99.85
KOG2563480 consensus Permease of the major facilitator superf 99.85
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.83
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.81
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.76
KOG3626 735 consensus Organic anion transporter [Secondary met 99.76
KOG2325488 consensus Predicted transporter/transmembrane prot 99.75
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.71
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.69
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 99.66
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.64
PRK05122399 major facilitator superfamily transporter; Provisi 99.59
PRK09528420 lacY galactoside permease; Reviewed 99.58
PRK10489417 enterobactin exporter EntS; Provisional 99.56
PRK10642490 proline/glycine betaine transporter; Provisional 99.55
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.55
PRK10054 395 putative transporter; Provisional 99.55
PRK15011393 sugar efflux transporter B; Provisional 99.54
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.54
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.53
PRK09874408 drug efflux system protein MdtG; Provisional 99.53
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.52
PRK12382392 putative transporter; Provisional 99.51
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.51
PRK03893496 putative sialic acid transporter; Provisional 99.51
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 99.5
PRK11663 434 regulatory protein UhpC; Provisional 99.5
PRK03545390 putative arabinose transporter; Provisional 99.5
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.49
PRK09584 500 tppB putative tripeptide transporter permease; Rev 99.49
PRK03633381 putative MFS family transporter protein; Provision 99.49
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.49
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.49
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.49
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.48
PRK11646 400 multidrug resistance protein MdtH; Provisional 99.48
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.47
PRK10207 489 dipeptide/tripeptide permease B; Provisional 99.46
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.45
PRK09705393 cynX putative cyanate transporter; Provisional 99.44
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.44
PRK10504 471 putative transporter; Provisional 99.43
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.43
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.43
PRK11010491 ampG muropeptide transporter; Validated 99.42
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 99.42
PLN00028 476 nitrate transmembrane transporter; Provisional 99.42
PRK03699394 putative transporter; Provisional 99.42
TIGR00900 365 2A0121 H+ Antiporter protein. 99.42
PRK10091 382 MFS transport protein AraJ; Provisional 99.41
PRK14995 495 methyl viologen resistance protein SmvA; Provision 99.4
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.39
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 99.39
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.39
PRK11043 401 putative transporter; Provisional 99.36
TIGR00897 402 2A0118 polyol permease family. This family of prot 99.36
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.36
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.36
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 99.36
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 99.35
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 99.35
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.35
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.34
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.34
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.33
PRK12307426 putative sialic acid transporter; Provisional 99.33
TIGR00893399 2A0114 d-galactonate transporter. 99.33
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 99.33
TIGR00895 398 2A0115 benzoate transport. 99.32
TIGR00891 405 2A0112 putative sialic acid transporter. 99.32
PRK11195 393 lysophospholipid transporter LplT; Provisional 99.31
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 99.31
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.3
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 99.29
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 99.29
PRK11652 394 emrD multidrug resistance protein D; Provisional 99.28
PRK09952438 shikimate transporter; Provisional 99.28
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.28
PRK15403 413 multidrug efflux system protein MdtM; Provisional 99.26
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 99.25
PRK15075434 citrate-proton symporter; Provisional 99.24
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 99.24
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.23
PRK11902402 ampG muropeptide transporter; Reviewed 99.22
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 99.21
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 99.21
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.19
KOG3098461 consensus Uncharacterized conserved protein [Funct 99.18
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.17
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.17
PRK10133 438 L-fucose transporter; Provisional 99.16
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 99.15
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 99.15
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 99.14
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.14
COG2270438 Permeases of the major facilitator superfamily [Ge 99.14
KOG3762618 consensus Predicted transporter [General function 99.13
TIGR00896 355 CynX cyanate transporter. This family of proteins 99.12
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.12
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.11
TIGR00898505 2A0119 cation transport protein. 99.11
PRK09848448 glucuronide transporter; Provisional 99.1
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.09
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.09
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.08
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.08
PRK10406 432 alpha-ketoglutarate transporter; Provisional 99.05
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.04
KOG0637498 consensus Sucrose transporter and related proteins 99.03
KOG3764 464 consensus Vesicular amine transporter [Intracellul 99.01
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.01
KOG3762618 consensus Predicted transporter [General function 99.0
TIGR00901 356 2A0125 AmpG-related permease. 99.0
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.0
KOG0569485 consensus Permease of the major facilitator superf 98.99
COG0477338 ProP Permeases of the major facilitator superfamil 98.99
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.97
TIGR00805 633 oat sodium-independent organic anion transporter. 98.96
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.93
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 98.92
PRK10429473 melibiose:sodium symporter; Provisional 98.92
PTZ00207 591 hypothetical protein; Provisional 98.92
PRK09669444 putative symporter YagG; Provisional 98.91
KOG2615 451 consensus Permease of the major facilitator superf 98.9
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.89
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.87
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.83
KOG2532 466 consensus Permease of the major facilitator superf 98.79
KOG3810433 consensus Micronutrient transporters (folate trans 98.77
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 98.76
PF13347428 MFS_2: MFS/sugar transport protein 98.73
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 98.68
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 98.67
COG2211467 MelB Na+/melibiose symporter and related transport 98.64
PRK11462460 putative transporter; Provisional 98.6
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.48
KOG2533 495 consensus Permease of the major facilitator superf 98.45
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.44
KOG0254 513 consensus Predicted transporter (major facilitator 98.43
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 98.42
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 98.4
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.36
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 98.32
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 98.31
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 98.31
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 98.29
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.2
PF1283277 MFS_1_like: MFS_1 like family 98.18
PF1283277 MFS_1_like: MFS_1 like family 98.14
KOG2816 463 consensus Predicted transporter ADD1 (major facili 98.13
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 98.13
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 98.09
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 98.05
KOG2325 488 consensus Predicted transporter/transmembrane prot 97.98
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 97.88
KOG3880409 consensus Predicted small molecule transporter inv 97.86
KOG2563 480 consensus Permease of the major facilitator superf 97.85
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 97.55
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.53
PF06963 432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.49
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.29
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 97.25
COG3202509 ATP/ADP translocase [Energy production and convers 97.23
PRK03612 521 spermidine synthase; Provisional 97.04
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 96.93
PRK03612521 spermidine synthase; Provisional 96.8
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 96.71
COG0477 338 ProP Permeases of the major facilitator superfamil 96.52
KOG3098461 consensus Uncharacterized conserved protein [Funct 95.7
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 95.57
KOG0637 498 consensus Sucrose transporter and related proteins 95.31
KOG3626 735 consensus Organic anion transporter [Secondary met 94.94
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 94.94
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 94.78
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 94.63
KOG1479 406 consensus Nucleoside transporter [Nucleotide trans 93.79
KOG2601 503 consensus Iron transporter [Inorganic ion transpor 92.86
PF07857254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 92.62
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 92.51
KOG3574 510 consensus Acetyl-CoA transporter [Inorganic ion tr 91.87
KOG3097390 consensus Predicted membrane protein [Function unk 91.41
KOG2601503 consensus Iron transporter [Inorganic ion transpor 88.89
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 87.41
PF02990521 EMP70: Endomembrane protein 70; InterPro: IPR00424 85.49
KOG3880409 consensus Predicted small molecule transporter inv 82.39
KOG4830412 consensus Predicted sugar transporter [Carbohydrat 82.29
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 82.28
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-43  Score=308.00  Aligned_cols=356  Identities=21%  Similarity=0.283  Sum_probs=293.7

Q ss_pred             ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 016374            3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM   82 (390)
Q Consensus         3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~   82 (390)
                      ..+|++.+|+|+|..+.|+..|.|.++..++.|+...+.||+.||++++..+.++.++++++++++  ||+.++++|++.
T Consensus        34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~  111 (394)
T COG2814          34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--SFAVLLLARALA  111 (394)
T ss_pred             hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999999999999999999999  999999999999


Q ss_pred             hhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcCChHHHHHHHHHHHHHHHHHHhhccCC
Q 016374           83 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS  162 (390)
Q Consensus        83 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  162 (390)
                      |+..|..++...++..|..||+||++++++...+..++.++|.+++.++.|.+|||.+|++.+.++++..+..+...|  
T Consensus       112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--  189 (394)
T COG2814         112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--  189 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999888888888  


Q ss_pred             CCCCCCCchhhhhhhhhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcccchhhhhh
Q 016374          163 PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCV  242 (390)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~  242 (390)
                      |++.++..+.+               ..+..+++|+|+++...+..++...+.+..++|+.++++|..|+|++..++...
T Consensus       190 ~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll  254 (394)
T COG2814         190 PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLL  254 (394)
T ss_pred             CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHH
Confidence            11111111110               112335899999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccccccccchh
Q 016374          243 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSN  321 (390)
Q Consensus       243 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  321 (390)
                      .++++.++|+.++|++.|| +.|+.       ............... ....++.+.. ....+.++.............
T Consensus       255 ~~Gv~~~~Gn~~gGrl~dr-~~~~~-------l~~~~~l~a~~~l~l-~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~  325 (394)
T COG2814         255 AFGIAGFIGNLLGGRLADR-GPRRA-------LIAALLLLALALLAL-TFTGASPALALALLFLWGFAFSPALQGLQTRL  325 (394)
T ss_pred             HHHHHHHHHHHHHhhhccc-cchhH-------HHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHh
Confidence            9999999999999999999 55521       222212222222222 2222333333 333333333333322222222


Q ss_pred             ccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 016374          322 HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK  387 (390)
Q Consensus       322 ~~~~~~~~~~~~~g~~~~~~~~g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (390)
                       .+..||.+..+.+++....++|...|..++|.+.|+.|+....+..+...+++..+.....+++|
T Consensus       326 -a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~  390 (394)
T COG2814         326 -ARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDR  390 (394)
T ss_pred             -cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence             33667999999999999999999999999999999999999999999999999888776655443

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 2e-63
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 8e-07
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
 Score =  208 bits (532), Expect = 2e-63
 Identities = 69/397 (17%), Positives = 135/397 (34%), Gaps = 15/397 (3%)

Query: 1   MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 60
            ++A+ P   E  ++   +G   S     Y  ++   G  +D    +  L  G++  +  
Sbjct: 47  FALAM-PYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 105

Query: 61  TALTPVAAKL--GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY 118
                        +  + V+    G  +G+  P     +  W    ER   +++      
Sbjct: 106 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHN 165

Query: 119 LGS-VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI 177
           +G  +  L F   +     W +  Y       +      +    +P         E K  
Sbjct: 166 VGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND 225

Query: 178 -----VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 232
                      +   K I    +L    +W + +++       + +L W PTY  +V HF
Sbjct: 226 YPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF 285

Query: 233 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 292
            L +S     L          L GW++D +       T V      +  +  A  +  ++
Sbjct: 286 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF----MTLVTIATIVYWMN 341

Query: 293 HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYS-GVLLGLSNTAGVLAG-VFGTA 350
              +P + ++CM             +  +  ++AP+ + G   G +   G L G V  +A
Sbjct: 342 PAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 401

Query: 351 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387
             GY +    WD  F V +G  ++   +  +   GEK
Sbjct: 402 IVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 438
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 100.0
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 100.0
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
2cfq_A417 Lactose permease; transport, transport mechanism, 100.0
2xut_A524 Proton/peptide symporter family protein; transport 99.97
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.55
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.52
2cfq_A417 Lactose permease; transport, transport mechanism, 99.5
2xut_A 524 Proton/peptide symporter family protein; transport 99.47
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.45
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.34
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.29
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=100.00  E-value=2e-42  Score=320.39  Aligned_cols=369  Identities=15%  Similarity=0.183  Sum_probs=291.9

Q ss_pred             ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhh----hhhhhHHHHHHH
Q 016374            3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV----AAKLGLPFLLVV   78 (390)
Q Consensus         3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~l~~~   78 (390)
                      +.+|.+.+|+ .|+.+.|++.+++.++..++.+++|+++||+|||++++.+.++.+++.+++++    ++  |++.++++
T Consensus        49 ~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~  125 (451)
T 1pw4_A           49 LAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATS--SIAVMFVL  125 (451)
T ss_dssp             HHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHS--SSSHHHHH
T ss_pred             HHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccc--cHHHHHHH
Confidence            4578899999 99999999999999999999999999999999999999999999999999999    88  99999999


Q ss_pred             HHHHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhhcC-ChHHHHHHHHHHHHHHHHHHh
Q 016374           79 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLS  157 (390)
Q Consensus        79 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~  157 (390)
                      |+++|++.+...+...+++.|++|+|+|++++++.+.+.++|..++|.+++.+.+..| ||+.|++.+++.++..++.++
T Consensus       126 ~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~  205 (451)
T 1pw4_A          126 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFA  205 (451)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999989898 999999999888887777777


Q ss_pred             hccCCCCCCCCCchhhhhhh-----hhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCC
Q 016374          158 KAHSSPAEDPQLRPAEKKLI-----VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF  232 (390)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  232 (390)
                      ..||+|++.+..++++.+..     +++.+++.+.++...++.+|+|.++...+..++..........+.|.|+++.+|.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  285 (451)
T 1pw4_A          206 MMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF  285 (451)
T ss_dssp             HCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCC
T ss_pred             hccCCHhhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            77776654322211111100     0000011111122246788999999999999999999999999999999998899


Q ss_pred             cccchhhhhhHhHHHHHHHHHHHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHHHHHHHhcC--Cch-HHHHHHHHHH
Q 016374          233 NLTESGLFCVLPWLTMAFSANLGGWIADTL--VSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--DSP-AMAVLCMACS  307 (390)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~  307 (390)
                      ++.+.+...+...++.++++++.+++.||+  ++|+.       .... ........+......  .+. .......+.+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  357 (451)
T 1pw4_A          286 ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA-------TGVF-FMTLVTIATIVYWMNPAGNPTVDMICMIVIG  357 (451)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHH-------HHHH-HHHHHHHHHHHTTSCCTTCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh-------HHHH-HHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence            999999999999999999999999999999  77732       1111 111111222222222  233 3334444445


Q ss_pred             hhhccccccccchhccccCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374          308 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  382 (390)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  382 (390)
                      .+.............+..|+++|+++.|+.+...++ |..++|.+.|.+.|+.|++..|++.+++.+++.++..+.
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  433 (451)
T 1pw4_A          358 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV  433 (451)
T ss_dssp             HHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence            444443333334445556668899999999999999 999999999999999999999999988888887766654
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 390
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 2e-22
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 1e-08
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 96.3 bits (238), Expect = 2e-22
 Identities = 68/393 (17%), Positives = 135/393 (34%), Gaps = 14/393 (3%)

Query: 5   ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 64
            +P   E  ++   +G   S     Y  ++   G  +D    +  L  G++  +      
Sbjct: 47  AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM 106

Query: 65  PV--AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS- 121
                A   +  + V+    G  +G+  P     +  W    ER   +++      +G  
Sbjct: 107 GFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 166

Query: 122 VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC 181
           +  L F   +     W +  Y       +      +    +P         E K      
Sbjct: 167 IPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDD 226

Query: 182 ASKE-----PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE 236
            +++       K I    +L    +W + +++       + +L W PTY  +V HF L +
Sbjct: 227 YNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK 286

Query: 237 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 296
           S     L          L GW++D +       T     +  +  +  A  +  ++   +
Sbjct: 287 SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWMNPAGN 342

Query: 297 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAG-VFGTAATGY 354
           P + ++CM             +  +  ++AP + +G   G +   G L G V  +A  GY
Sbjct: 343 PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY 402

Query: 355 ILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 387
            +    WD  F V +G  ++   +  +   GEK
Sbjct: 403 TVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 435
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.97
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.57
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.42
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-40  Score=303.75  Aligned_cols=375  Identities=15%  Similarity=0.191  Sum_probs=284.7

Q ss_pred             ccccccccccCcCcchHHHHHHHHHHHHHHHHHhhHHhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hhHHHHHHHHH
Q 016374            3 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRV   80 (390)
Q Consensus         3 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~   80 (390)
                      ++.|.++ |+|+|++|+|++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++++++.  .+++.+++.|+
T Consensus        46 ~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (447)
T d1pw4a_          46 LAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF  124 (447)
T ss_dssp             HHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHH
T ss_pred             HHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHH
Confidence            3456665 58999999999999999999999999999999999999999999999999998877641  16788999999


Q ss_pred             HHhhccccchhhhhHHhhhcccCCchhHHHHHHHHhhhhhhHhHHhhHHHHhhh-cCChHHHHHHHHHHHHHHHHHHhhc
Q 016374           81 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKA  159 (390)
Q Consensus        81 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~  159 (390)
                      +.|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+. .+||+.|++.+++.++..++.+...
T Consensus       125 ~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~  204 (447)
T d1pw4a_         125 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM  204 (447)
T ss_dssp             HHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999887765 4799999999988888887777777


Q ss_pred             cCCCCCCCCCchhhhhhh-----hhcccCCCCCCcchhhhhhcCchhHHHHHHHHHHHHHHHHHhhchHHHHhHhcCCcc
Q 016374          160 HSSPAEDPQLRPAEKKLI-----VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL  234 (390)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~  234 (390)
                      +++|++.+....++.+..     .++.+++...++...++.+++|.++......++.....+....+.|.|+++.++.+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (447)
T d1pw4a_         205 RDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL  284 (447)
T ss_dssp             CCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCH
T ss_pred             ccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhccccccccc
Confidence            777665433222221111     111112222334456678889999999999999999999999999999999999999


Q ss_pred             cchhhhhhHhHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-HHHHHHHhhhccc
Q 016374          235 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAF  313 (390)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  313 (390)
                      .+.+.......+..+++.++.|++.||.++++....    .....................+.+.. ......+.+....
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  360 (447)
T d1pw4a_         285 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGP  360 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH----HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHH
T ss_pred             chhhhhhhcchhhhhhhhhhhhhhhhhccccccccc----cchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998753222    11111111122222122223333333 3333444444433


Q ss_pred             cccccchhccccCCCcchhHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q 016374          314 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF  382 (390)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~ig~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  382 (390)
                      .........+..|++.|+++.|+.+...++ |..++|.+.|.+.|+.|++..+++..++.+++.++...+
T Consensus       361 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  430 (447)
T d1pw4a_         361 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV  430 (447)
T ss_dssp             HHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            333333444556668899999999998887 456789999999999999999888887777776655543
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure