Citrus Sinensis ID: 016426

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Protein Sequence
MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Secondary Structure (PSIPRED)
cHHHHHHHHHHcccccccccccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccccccccccccccEEEccccccccccccccccccccccccccccEEccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHEccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcc
Coil and Loop (DISEMBL)
MTLLEVITKAVanhelpgsqlehpiilnpdniflnlkpelegasaaslvnpvsgwqiseVDTYLIDSGKKFHAKLKRKLkdtnnfdkdefIGILNPYLQKIgekvgistrinrsdsgytqgLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGlvdhssysnLVTRLATEKRSDLLCLCvkyspdlgsseLLCILKYflcppkdaygsmgsvrMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLlassnidevILSSSISKLNGKELMGLIRYLGKWLKKferfpqagpcpeasfglglkacdwvpKLEVIVQCLGLvldenfsslvllPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Flexible Loop (DISEMBL)
MTLLEVITKAVanhelpgsqlehpIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKlkdtnnfdkdefiGILNPYLQKIGEKVGIstrinrsdsgytQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSsisklngkELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Low Complexity Region (SEG)
MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGkkfhaklkrklkDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Disordered region (IsUnstruct)
****EVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKAS*ENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVK****
Disordered Region (DISOPRED)
*TLLEV******************IILNPDN***********************WQ**E******DS****HA**********NFDKDEFIGILNPYLQ*********************GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALL*********************SILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPC******LGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRF**
Disordered Region (DISEMBL)
MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Disordered Region (DISPRO)
*T*****TK*VA*****GSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFG*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEVDTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCSLANVVKRFGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
255540939	395	conserved hypothetical protein [Ricinus	0.984	0.972	0.694	1e-155
224124154	397	predicted protein [Populus trichocarpa]	0.994	0.977	0.680	1e-148
356512445	399	PREDICTED: uncharacterized protein LOC10	0.994	0.972	0.623	1e-135
255635341	399	unknown [Glycine max]	0.994	0.972	0.620	1e-135
18394662	399	uncharacterized protein [Arabidopsis tha	0.987	0.964	0.608	1e-130
356562814	394	PREDICTED: uncharacterized protein LOC10	0.987	0.977	0.600	1e-130
21617960	399	unknown [Arabidopsis thaliana]	0.987	0.964	0.603	1e-128
225456693	395	PREDICTED: uncharacterized protein LOC10	0.989	0.977	0.629	1e-128
297850280	399	hypothetical protein ARALYDRAFT_472110 [	0.987	0.964	0.598	1e-128
147842467	442	hypothetical protein VITISV_034573 [Viti	0.989	0.873	0.629	1e-128

>gi|255540939|ref|XP_002511534.1| conserved hypothetical protein [Ricinus communis] gi|223550649|gb|EEF52136.1| conserved hypothetical protein [Ricinus communis]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/386 (69%), Positives = 325/386 (84%), Gaps = 2/386 (0%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           M+LL+VITKA + +  P  Q E+PI+LN D++FLNLK   E  + +SL +PV+GWQ++E 
Sbjct: 1   MSLLDVITKAASVNVEP--QSEYPIVLNSDDVFLNLKANAETPNPSSLASPVTGWQLAET 58

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D +LI+ GKKF+ KLKRKLKD N+F+KDEF GILNP+L+K+GEK+GIS  ++ SD+GYTQ
Sbjct: 59  DVHLIELGKKFYCKLKRKLKDINHFNKDEFFGILNPFLEKMGEKIGISVGVSSSDNGYTQ 118

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEK+GFLMGRDV  LVLEAC+SL IW+LVETLI+ GLVD+S YSNLV  L   KRSDL
Sbjct: 119 VLIEKIGFLMGRDVTGLVLEACLSLEIWDLVETLIIKGLVDYSCYSNLVKNLVANKRSDL 178

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           LCL +K++PDLG SELLCILKYFLCP K+AY +M +VR EWESQALLAIEK  ++NL  K
Sbjct: 179 LCLSIKHAPDLGLSELLCILKYFLCPSKEAYSAMANVRKEWESQALLAIEKVRNKNLPDK 238

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
           KL +AKEA+ILLM+AHDGFS SELCLHYLLAS NIDEVILSSSI KLNGKE+M  I+YLG
Sbjct: 239 KLRVAKEAAILLMLAHDGFSTSELCLHYLLASVNIDEVILSSSIGKLNGKEMMSFIKYLG 298

Query: 301 KWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEE 360
           KWLKK+E FPQA PCP+AS  LGLK CDWVPKLE IV+CLGLVLDENFS+LVL PEF EE
Sbjct: 299 KWLKKYETFPQASPCPKASSTLGLKGCDWVPKLEDIVKCLGLVLDENFSTLVLHPEFHEE 358

Query: 361 LRSIEGVVSTLASEARYCCSLANVVK 386
           LRSIEG+V++LA EA++C S+AN+++
Sbjct: 359 LRSIEGLVASLALEAKFCSSVANIIE 384

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124154|ref|XP_002330118.1| predicted protein [Populus trichocarpa] gi|222871252|gb|EEF08383.1| predicted protein [Populus trichocarpa]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 264/388 (68%), Positives = 314/388 (80%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           M+LL+VITKA  + +   SQ E+PIILN D+IFLNLKP LE   A SL NPV+GWQ+S+ 
Sbjct: 1   MSLLQVITKASDDSDHVVSQSEYPIILNTDDIFLNLKPALENLDATSLANPVTGWQLSQS 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D+ LIDSGKKF+ KLKRKLKD +NF+KD F  IL P+L+KIG K GI+  I+ SD+ YT+
Sbjct: 61  DSQLIDSGKKFYTKLKRKLKDHSNFNKDGFFEILIPFLEKIGHKAGIAVGIDSSDAAYTR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEKVGF MGRDVA LV++ACISL IW+LVETLIV+ +VDHSSYS+LV  L  +KRSDL
Sbjct: 121 VLIEKVGFSMGRDVAGLVMKACISLEIWDLVETLIVNRIVDHSSYSDLVMSLVMKKRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           L L ++Y+ D G SELL ILKYFLCP KDAY  M +VR EWESQALLAIE ASD+NL  K
Sbjct: 181 LSLTIQYASDFGLSELLSILKYFLCPSKDAYSCMVNVRKEWESQALLAIEMASDKNLLEK 240

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
           K  +AK++SILLM+AHDGF  SELCLHYLLAS  +DE IL+S+ISKLNGKE+M LIRYLG
Sbjct: 241 KSQIAKDSSILLMLAHDGFLTSELCLHYLLASPIVDEAILTSAISKLNGKEMMSLIRYLG 300

Query: 301 KWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEE 360
           KWL+K+E FPQAGPCP+AS  LGLKACDWVPKLE IV+CLGLVLDENFSSLVL P F EE
Sbjct: 301 KWLRKYEMFPQAGPCPKASSALGLKACDWVPKLEDIVRCLGLVLDENFSSLVLHPGFHEE 360

Query: 361 LRSIEGVVSTLASEARYCCSLANVVKRF 388
           L SI G  ++LASEA+  C++ANV++  
Sbjct: 361 LNSIGGFAASLASEAKLSCTVANVIENL 388

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512445|ref|XP_003524929.1| PREDICTED: uncharacterized protein LOC100817544 [Glycine max]

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/390 (62%), Positives = 304/390 (77%), Gaps = 2/390 (0%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLEVI  A  N +   S L++PI+LNP  I  NLKPE+E  S++SL+ P+ GWQIS+ 
Sbjct: 1   MTLLEVIKDASVNSKPLDSPLDYPIVLNPGGILPNLKPEVEDESSSSLIKPLIGWQISQT 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D  +ID  KKF  +LK KLK+TNN DK EFI  LN YL+ I +K+G+   ++ S SGYT+
Sbjct: 61  DAEIIDVSKKFFTQLKAKLKNTNNLDKGEFISSLNSYLENIRDKLGVVIGVDSSCSGYTR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEK+G  +G+DVA LVL+  +SL IWE+V+ LIV+G+ +HS YS+LVT+L  +KRSDL
Sbjct: 121 ILIEKLGVFIGKDVAGLVLDGSVSLEIWEVVKALIVNGITEHSCYSDLVTKLVVKKRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           LCLC+K+  DLGSSE+L IL+YFL P KD+Y SM +V+ EWE QALLAIEKASD NL +K
Sbjct: 181 LCLCIKHGFDLGSSEILTILRYFLSPSKDSYDSMVTVKKEWECQALLAIEKASDSNLKKK 240

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
            L +AKEASILLM+A+DGFS SE+CLHYL +SSNI++V+LS S SKLN KEL+ LIRYL 
Sbjct: 241 YLLIAKEASILLMMAYDGFSASEICLHYLFSSSNINDVMLSPSFSKLNSKELINLIRYLA 300

Query: 301 KWLKKFERFPQAGPCPEAS--FGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQ 358
           KWLKK+ERFPQAGPCP+AS    LGL  CDWVPKLE +++CLGLVLDENFSSLVL P+F 
Sbjct: 301 KWLKKYERFPQAGPCPKASSVSVLGLNVCDWVPKLEDVIKCLGLVLDENFSSLVLHPQFH 360

Query: 359 EELRSIEGVVSTLASEARYCCSLANVVKRF 388
           EELRSIEGVVS L  EA++C  + +VV + 
Sbjct: 361 EELRSIEGVVSCLTVEAKFCHLMTDVVDKI 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635341|gb|ACU18024.1| unknown [Glycine max]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 242/390 (62%), Positives = 303/390 (77%), Gaps = 2/390 (0%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLEVI  A  N +   S L++PI+LNP  I  NLKPE+E  S++SL+ P+ GWQIS  
Sbjct: 1   MTLLEVIKDASVNSKPLDSPLDYPIVLNPGGILPNLKPEVEDESSSSLIKPLIGWQISHT 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D  +ID  KKF  +LK KLK+TN+ DK EFI  LN YL+ I +K+G+   ++ S SGYT+
Sbjct: 61  DAEIIDVSKKFFTQLKAKLKNTNDLDKGEFISSLNSYLENIRDKLGVVIGVDSSCSGYTR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEK+G  +G+DVA LVL+  +SL IWE+V+ LIV+G+ +HS YS+LVT+L  +KRSDL
Sbjct: 121 ILIEKLGVFIGKDVAGLVLDGSVSLEIWEVVKALIVNGITEHSCYSDLVTKLVVKKRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           LCLC+K+  DLGSSE+L IL+YFL P KD+Y SM +V+ EWE QALLAIEKASD NL +K
Sbjct: 181 LCLCIKHGFDLGSSEILTILRYFLSPSKDSYDSMVTVKKEWECQALLAIEKASDSNLKKK 240

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
            L +AKEASILLMVA+DGFS SE+CLHYL +SSNI++V+LS S SKLN KEL+ LIRYL 
Sbjct: 241 YLLIAKEASILLMVAYDGFSASEICLHYLFSSSNINDVMLSPSFSKLNSKELINLIRYLA 300

Query: 301 KWLKKFERFPQAGPCPEAS--FGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQ 358
           KWLKK+ERFPQAGPCP+AS    LGL  CDWVPKLE +++CLGLVLDENFSSLVL P+F 
Sbjct: 301 KWLKKYERFPQAGPCPKASSVSVLGLNVCDWVPKLEDVIKCLGLVLDENFSSLVLHPQFH 360

Query: 359 EELRSIEGVVSTLASEARYCCSLANVVKRF 388
           EELRSIEGVVS L  +A++C  + +VV + 
Sbjct: 361 EELRSIEGVVSCLTVDAKFCHLMTDVVDKI 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394662|ref|NP_564065.1| uncharacterized protein [Arabidopsis thaliana] gi|6730701|gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gi|15810347|gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gi|20465593|gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gi|332191650|gb|AEE29771.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/391 (60%), Positives = 296/391 (75%), Gaps = 6/391 (1%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLE I+ AVAN +   SQ ++PI L+ D IF NLKP+LE  +  +LVNP+SGW ISE 
Sbjct: 1   MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D  +ID GKKF +KLKRKLKDTN F KDEF+ +L  +L+KIGEKVGIS   +    G   
Sbjct: 61  DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120

Query: 121 G-----LIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
           G     L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L  +
Sbjct: 121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query: 176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDE 235
           +RSDLLC+ +K + DLG++ELL ILKYFLCP K+A  +M  VR EWESQA+LAIEK S+ 
Sbjct: 181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEKVSNT 240

Query: 236 NLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGL 295
            LS+K   +A+EASILLMVAHDGFS SELCLHYLLAS N+DEV+ +S++SKLNG E+   
Sbjct: 241 ELSKKS-KVAEEASILLMVAHDGFSTSELCLHYLLASRNVDEVMFASAVSKLNGNEMGSF 299

Query: 296 IRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLP 355
           IRYL KW+KK+E FPQAGPCP+A+  LGLK C+WVP+L  I +CLGL++DENFS+LVL  
Sbjct: 300 IRYLSKWMKKYEMFPQAGPCPKAASKLGLKLCNWVPELTDITKCLGLLIDENFSTLVLYS 359

Query: 356 EFQEELRSIEGVVSTLASEARYCCSLANVVK 386
           +  EEL+SI  V   LASE++  C +ANVV+
Sbjct: 360 DLHEELKSIARVADGLASESKLSCFVANVVE 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562814|ref|XP_003549663.1| PREDICTED: uncharacterized protein LOC100806052 [Glycine max]

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/388 (60%), Positives = 298/388 (76%), Gaps = 3/388 (0%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLEVI  A  N +   S +++PI+LNPD I  NLKPE+E  S++SL+ P+ GWQ+S+ 
Sbjct: 1   MTLLEVIKDASVNSKPLDSPIDYPIVLNPDGILPNLKPEVEDESSSSLIKPLIGWQLSQT 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D  +ID  KKF  +LK KLK+ N+ +K EFIG LN YL+ I +K+G+    + S SGY +
Sbjct: 61  DAEIIDISKKFFIQLKAKLKNNNDLNKGEFIGSLNSYLENIRDKLGVVIEFDPSCSGYNR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LI+K+G  MG+DVA LVL+  +SL IWE+V+ LIV+G+ +HS YSNL+T+L  +KRSDL
Sbjct: 121 ALIDKLGVFMGKDVAGLVLDGSVSLEIWEVVKALIVNGITEHSCYSNLITKLVEKKRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           LCLC+ +  DLGSSE+L IL+YFL P KDAY SM +V+ +WE Q LLAIEKA+D NL +K
Sbjct: 181 LCLCITHGFDLGSSEILTILRYFLSPSKDAYNSMVTVKKDWECQVLLAIEKANDSNL-KK 239

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
            L  AKEASILLM+A+DGFS SE+CLHYL ASSNI++V+LS S SKLNGKEL+ LIRYL 
Sbjct: 240 YLLTAKEASILLMMAYDGFSASEICLHYLFASSNINDVVLSPSFSKLNGKELINLIRYLA 299

Query: 301 KWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEE 360
           KWLKK+ERFPQAGPCP+AS     +AC+WVPKLE +++CLGLVLDE FSSLVL P+F EE
Sbjct: 300 KWLKKYERFPQAGPCPKASS--VSEACEWVPKLEDVIKCLGLVLDEKFSSLVLHPQFHEE 357

Query: 361 LRSIEGVVSTLASEARYCCSLANVVKRF 388
           LRSIE VVS L  EA++C  + +VV + 
Sbjct: 358 LRSIEEVVSCLTDEAKFCHLMTDVVDKL 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21617960|gb|AAM67010.1| unknown [Arabidopsis thaliana]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/391 (60%), Positives = 294/391 (75%), Gaps = 6/391 (1%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLE I+ AVAN +   SQ ++PI L+ D IF NLKP+LE  +  +LVNP+SGW ISE 
Sbjct: 1   MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D  +ID GKKF +KLKRKLKDTN F KDEF+ +L  +L+KIGEKVGIS   +    G   
Sbjct: 61  DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120

Query: 121 G-----LIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
           G     L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L  +
Sbjct: 121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query: 176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDE 235
           +RSDLLC+ +K + DLG++ELL ILKYFLCP K+A  +   VR EWESQA+LAIEK S+ 
Sbjct: 181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTTAKVREEWESQAMLAIEKVSNT 240

Query: 236 NLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGL 295
            LS+K   +A+EASILLMVAHDGFS SELCLHYLLAS N+DE + +S++SKLNG E+   
Sbjct: 241 ELSKKSK-VAEEASILLMVAHDGFSTSELCLHYLLASRNVDEFMFASAVSKLNGNEMGSF 299

Query: 296 IRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLP 355
           IRYL KW+KK+E FPQAGPCP+A+  LGLK C+WVP+L  I +CLGL++DENFS+LVL  
Sbjct: 300 IRYLSKWMKKYEMFPQAGPCPKAASKLGLKLCNWVPELTDITKCLGLLIDENFSTLVLYS 359

Query: 356 EFQEELRSIEGVVSTLASEARYCCSLANVVK 386
           +  EEL+SI  V   LASE++  C +ANVV+
Sbjct: 360 DLHEELKSIARVADGLASESKLSCFVANVVE 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456693|ref|XP_002273275.1| PREDICTED: uncharacterized protein LOC100257068 [Vitis vinifera]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/386 (62%), Positives = 308/386 (79%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           M+LLE++TKA AN +   +   +PIILNP++  L+L P +E     SLV PVSG+QIS+ 
Sbjct: 1   MSLLELVTKAAANPKTLTAPSTYPIILNPEDSLLSLNPNVENPDPNSLVVPVSGFQISQT 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D+ +IDS  KF  KLKRKLK+ ++F+ D+ IGIL+ +L+K G+KV +S  ++ S  GYT+
Sbjct: 61  DSEIIDSANKFFKKLKRKLKNPSSFNTDDLIGILSSFLEKNGKKVDVSVGVDPSTEGYTR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEK+GFLMGRDV+ LVLEAC+ L  WELVE LIV+G V HSSYSNLV+ L  ++RSDL
Sbjct: 121 VLIEKLGFLMGRDVSELVLEACLVLGNWELVEALIVNGHVAHSSYSNLVSVLVEKRRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           +CLC+K+  DLGSSELLCILKYFL PP+ AY SM +VR  WESQA LAIEKAS+++L  K
Sbjct: 181 VCLCIKHFTDLGSSELLCILKYFLLPPRGAYSSMVAVRKGWESQAKLAIEKASNKDLKGK 240

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
           K  +AKEA++LL++AHD F  SELCLHYLL+S N+D+VI   SISKLNG+E+M LIRYLG
Sbjct: 241 KSHVAKEAAVLLVIAHDEFLASELCLHYLLSSPNLDDVIFPYSISKLNGEEIMSLIRYLG 300

Query: 301 KWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEE 360
           KWLKK+ERFPQAGPCP+AS  LGLKACD VP LE +V+C GLVL+E+FSSLVL  EF+EE
Sbjct: 301 KWLKKYERFPQAGPCPKASSMLGLKACDSVPTLEAVVKCFGLVLNEHFSSLVLNLEFREE 360

Query: 361 LRSIEGVVSTLASEARYCCSLANVVK 386
           LRS++ VV++LA EAR CCS+ANVV+
Sbjct: 361 LRSMKAVVTSLALEARLCCSVANVVE 386

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850280|ref|XP_002893021.1| hypothetical protein ARALYDRAFT_472110 [Arabidopsis lyrata subsp. lyrata] gi|297338863|gb|EFH69280.1| hypothetical protein ARALYDRAFT_472110 [Arabidopsis lyrata subsp. lyrata]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/391 (59%), Positives = 294/391 (75%), Gaps = 6/391 (1%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           MTLLE I+ AVAN +   SQ ++P  L+ D IF NLKP+LE  +  +L+NP+SGW IS  
Sbjct: 1   MTLLEAISNAVANQDKVDSQSDYPFPLSHDGIFANLKPKLENPNLGTLINPISGWGISGS 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTR-----INRSD 115
           D  +ID GKKF +KLKRKLKDTN F KDEF+ +L  +L+KIGEKVGIS       +    
Sbjct: 61  DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAEPGMVLEDQA 120

Query: 116 SGYTQGLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
               Q L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L  +
Sbjct: 121 GPEIQILMEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query: 176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDE 235
           +RSDLLC+ +K + DLG++ELL ILKYFL P K+A  +M  VR+EWESQA+LAIEK S+ 
Sbjct: 181 QRSDLLCVVIKEASDLGATELLLILKYFLYPSKEAITTMAKVRVEWESQAMLAIEKVSNT 240

Query: 236 NLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGL 295
            LS+K   +A+EASILLMVAHDGFS SELCLHYLLAS N+DEV+ +S++SKLNG E+   
Sbjct: 241 ELSKKS-KVAEEASILLMVAHDGFSTSELCLHYLLASRNVDEVMFASAVSKLNGNEMSSF 299

Query: 296 IRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLP 355
           IRYL KW+KK+E FPQAGPCP+A+  LGLK C+WVP+L  I +CLGL++DENFS+LVL  
Sbjct: 300 IRYLSKWMKKYEMFPQAGPCPKAASKLGLKLCNWVPELADITKCLGLIIDENFSTLVLYS 359

Query: 356 EFQEELRSIEGVVSTLASEARYCCSLANVVK 386
           +  EEL+SI  V   LASE++ CC +ANVV+
Sbjct: 360 DLHEELKSIARVADGLASESKLCCFVANVVE 390

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147842467|emb|CAN63140.1| hypothetical protein VITISV_034573 [Vitis vinifera]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/386 (62%), Positives = 308/386 (79%)

Query: 1   MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
           M+LLE++TKA AN +   +   +PIILNP++  L+L P +E     SLV PVSG+QIS+ 
Sbjct: 1   MSLLELVTKAAANPKTLTAPSTYPIILNPEDSLLSLNPNVENPDPNSLVVPVSGFQISQT 60

Query: 61  DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
           D+ +IDS  KF  KLKRKLK+ ++F+ D+ IGIL+ +L+K G+KV +S  ++ S  GYT+
Sbjct: 61  DSEIIDSANKFFKKLKRKLKNPSSFNTDDLIGILSSFLEKNGKKVDVSVGVDPSTEGYTR 120

Query: 121 GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL 180
            LIEK+GFLMGRDV+ LVLEAC+ L  WELVE LIV+G V HSSYSNLV+ L  ++RSDL
Sbjct: 121 VLIEKLGFLMGRDVSELVLEACLVLGNWELVEALIVNGHVAHSSYSNLVSVLVEKRRSDL 180

Query: 181 LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDENLSRK 240
           +CLC+K+  DLGSSELLCILKYFL PP+ AY SM +VR  WESQA LAIEKAS+++L  K
Sbjct: 181 VCLCIKHFTDLGSSELLCILKYFLLPPRGAYSSMVAVRKGWESQAKLAIEKASNKDLKGK 240

Query: 241 KLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGLIRYLG 300
           K  +AKEA++LL++AHD F  SELCLHYLL+S N+D+VI   SISKLNG+E+M LIRYLG
Sbjct: 241 KSHVAKEAAVLLVIAHDEFLASELCLHYLLSSPNLDDVIFPYSISKLNGEEIMSLIRYLG 300

Query: 301 KWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEE 360
           KWLKK+ERFPQAGPCP+AS  LGLKACD VP LE +V+C GLVL+E+FSSLVL  EF+EE
Sbjct: 301 KWLKKYERFPQAGPCPKASSMLGLKACDSVPTLEAVVKCFGLVLNEHFSSLVLNLEFREE 360

Query: 361 LRSIEGVVSTLASEARYCCSLANVVK 386
           LRS++ VV++LA EAR CCS+ANVV+
Sbjct: 361 LRSMKAVVTSLALEARLCCSVANVVE 386

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
TAIR|locus:2034969	399	AT1G18850 "AT1G18850" [Arabido	0.987	0.964	0.583	2.8e-114

TAIR|locus:2034969 AT1G18850 "AT1G18850" [Arabidopsis thaliana (taxid:3702)]

 Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
 Identities = 228/391 (58%), Positives = 285/391 (72%)

Query:     1 MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
             MTLLE I+ AVAN +   SQ ++PI L+ D IF NLKP+LE  +  +LVNP+SGW ISE 
Sbjct:     1 MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60

Query:    61 DTYLIDSGXXXXXXXXXXXXDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
             D  +ID G            DTN F KDEF+ +L  +L+KIGEKVGIS   +    G   
Sbjct:    61 DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120

Query:   121 G-----LIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
             G     L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L  +
Sbjct:   121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query:   176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKASDE 235
             +RSDLLC+ +K + DLG++ELL ILKYFLCP K+A  +M  VR EWESQA+LAIEK S+ 
Sbjct:   181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEKVSNT 240

Query:   236 NLSRKKLCLAKEASILLMVAHDGFSVSELCLHYLLASSNIDEVILSSSISKLNGKELMGL 295
              LS+K   +A+EASILLMVAHDGFS SELCLHYLLAS N+DEV+ +S++SKLNG E+   
Sbjct:   241 ELSKKSK-VAEEASILLMVAHDGFSTSELCLHYLLASRNVDEVMFASAVSKLNGNEMGSF 299

Query:   296 IRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLP 355
             IRYL KW+KK+E FPQAGPCP+A+  LGLK C+WVP+L  I +CLGL++DENFS+LVL  
Sbjct:   300 IRYLSKWMKKYEMFPQAGPCPKAASKLGLKLCNWVPELTDITKCLGLLIDENFSTLVLYS 359

Query:   356 EFQEELRSIEGVVSTLASEARYCCSLANVVK 386
             +  EEL+SI  V   LASE++  C +ANVV+
Sbjct:   360 DLHEELKSIARVADGLASESKLSCFVANVVE 390


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      390       378   0.00089  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  244 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.78u 0.07s 28.85t   Elapsed:  00:00:04
  Total cpu time:  28.78u 0.07s 28.85t   Elapsed:  00:00:04
  Start:  Sat May 11 06:22:16 2013   End:  Sat May 11 06:22:20 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005730 "nucleolus" evidence=IDA

GO:0001510 "RNA methylation" evidence=RCA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	390
PF04003	110	Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A la	96.27

>PF04003 Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]

Probab=96.27  E-value=0.021  Score=47.18  Aligned_cols=91  Identities=19%  Similarity=0.222  Sum_probs=77.2

Q ss_pred             CchhhHhhhhccCChHHHHHHHHHHHHHHHHhccCCCCCCCCCcccccCCCcCCCCCChHHHHHHHHHHhhcccceeeec
Q 016426          275 IDEVILSSSISKLNGKELMGLIRYLGKWLKKFERFPQAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLL  354 (390)
Q Consensus       275 ~De~~Llp~LkdL~~~ev~~lLrYL~kW~~kys~~~~~~pcp~a~s~pgl~~~~~vPtl~qI~dWi~LlLDahFT~lVm~  354 (390)
                      +|...+--.++.||...+..||+|+..|+.+-                      ..|..+-.+.|+-.+|-.|.+.+.-.
T Consensus        13 ~~~~~I~~tv~~Lp~~~~~~LL~~l~~~l~~~----------------------~~~~~e~~l~Wl~~ll~~H~~~l~~~   70 (110)
T PF04003_consen   13 IPPSDIENTVRSLPFSYAERLLQFLSERLQTR----------------------KSPHVEFLLRWLKALLKTHGSYLSSS   70 (110)
T ss_pred             CCHHHHHHHHHhCCHHHHHHHHHHHHHHhccc----------------------CCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            45777888889999999999999999997522                      23677889999999999999999999


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHHhhccHH-HHHHH
Q 016426          355 -PEFQEELRSIEGVVSTLASEARYCCSLA-NVVKR  387 (390)
Q Consensus       355 -peake~L~~l~~~Vksq~~~~~~~~~~~-~~~~~  387 (390)
                       |+....|+.+++.+++.....+..+..- +-++-
T Consensus        71 ~~~~~~~L~~L~~~l~~~~~~l~~l~~~n~~~L~~  105 (110)
T PF04003_consen   71 SPELRPVLRSLQKILRERLQNLSKLLDLNLGRLDY  105 (110)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence             9999999999999999888888777665 55443

This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. This domain is found at the C terminus of proteins containing WD40 repeats. These proteins are part of the U3 ribonucleoprotein. In yeast, these proteins are called Utp5, Utp1 or Pwp2, Utp12 or DIP2 Q12220 from SWISSPROT. They interact with snoRNA U3 and with MPP10 []. Pwp2 is an essential Saccharomyces cerevisiae (Baker's yeast) protein involved in cell separation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00