Citrus Sinensis ID: 016429
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FMK9 | 389 | Probable inactive purple | yes | no | 0.938 | 0.940 | 0.702 | 1e-153 | |
| Q84LR6 | 401 | Probable inactive purple | no | no | 0.941 | 0.915 | 0.557 | 1e-109 | |
| Q9LU72 | 397 | Probable inactive purple | no | no | 0.941 | 0.924 | 0.477 | 3e-98 | |
| Q05924 | 578 | Phosphatase DCR2 OS=Sacch | yes | no | 0.782 | 0.527 | 0.355 | 8e-37 | |
| O59759 | 509 | Uncharacterized protein C | yes | no | 0.756 | 0.579 | 0.307 | 9e-27 | |
| Q9SR79 | 367 | Probable inactive purple | no | no | 0.802 | 0.852 | 0.267 | 5e-21 | |
| Q12212 | 622 | Protein SIA1 OS=Saccharom | no | no | 0.646 | 0.405 | 0.244 | 1e-12 | |
| Q6CPQ2 | 578 | Protein SIA1 OS=Kluyverom | no | no | 0.725 | 0.489 | 0.238 | 2e-11 |
| >sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 540 bits (1391), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/370 (70%), Positives = 294/370 (79%), Gaps = 4/370 (1%)
Query: 17 LTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL 76
L LC++P A Q RKLRF NGEFKILQVADMHFANG T C +VLPSQ A CSDL
Sbjct: 22 LACLCLSPIPAT--AQRRKLRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDL 79
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136
NTT F++R+I+AEKPDLIVFTGDNIFGFD DA KS+NAAFAPAIAS IPWVA+LGNHDQ
Sbjct: 80 NTTIFMSRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQ 139
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSD-AHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195
EST +R+ VM HIV L NTLSQVNP + AH IDGFGNYNL+I G S +NKSVLNLYF
Sbjct: 140 ESTFTRQQVMNHIVKLPNTLSQVNPPEAAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYF 199
Query: 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
LDSGDYS+VP + GY WIK SQQFWF++TS RL+R Y +KP Q+ APGL YFHIPLPE
Sbjct: 200 LDSGDYSSVPYMEGYDWIKTSQQFWFDRTSKRLKREYNAKPNPQEGIAPGLAYFHIPLPE 259
Query: 256 FAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
F FD N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LC
Sbjct: 260 FLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLC 319
Query: 315 YGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374
YGGGFGYHAYGKAGWERRARVVV L K K WG VKSIKTWKRLDD+HL+ +D VLW
Sbjct: 320 YGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLW 379
Query: 375 SKTSSGMRRR 384
+ +++ + R
Sbjct: 380 NNSANKLVVR 389
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q84LR6|PPA14_ARATH Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/375 (55%), Positives = 264/375 (70%), Gaps = 8/375 (2%)
Query: 12 VIVAVLTLLCIAPTLAVNAKQ--ERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
V+ L LC++ T V+A R+LRF +G FKILQV+DMH+ GK T C DV P++
Sbjct: 13 VLSVSLIYLCLS-TCHVSAFDFGRRQLRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAE 71
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAIASNIPWV 128
CSDLNTT+F+ R I++EKPDLIVF+GDN++G + +D AKS++ AFAPAI S IPWV
Sbjct: 72 FPYCSDLNTTSFLQRTIASEKPDLIVFSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWV 131
Query: 129 AVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFE 186
A+LGNHDQES ++RE +MK+I+ L N+LSQVNP DA + IDGFGNYNL+I G GS
Sbjct: 132 AILGNHDQESDMTRETMMKYIMKLPNSLSQVNPPDAWLYQIDGFGNYNLQIEGPFGSPLF 191
Query: 187 NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPG 245
KS+LNLY LD G Y+ + Y W+K SQQ W+E TS L+ + P Q + APG
Sbjct: 192 FKSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251
Query: 246 LVYFHIPLPEFAYFDQS-NFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDF 304
LVY HIP+PEFA F++S TGVRQE S +NSGFFT +V G+VK VF+GHDHVNDF
Sbjct: 252 LVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDF 311
Query: 305 CGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEH 364
C L GI LCY GG GYH YG+ GW RR RVV A LEKT WG V +IKTWKRLDD++
Sbjct: 312 CAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKN 371
Query: 365 LTGVDGHVLWSKTSS 379
+ +D +LW+K ++
Sbjct: 372 HSLIDTQLLWTKNTT 386
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/398 (47%), Positives = 240/398 (60%), Gaps = 31/398 (7%)
Query: 7 KKPALVIVAVLTLL-----CIAPTLAVNAKQER-------KLRFRQNGEFKILQVADMHF 54
K L + +++LL I+ L +N + R LRFR +G FKILQVADMHF
Sbjct: 9 KHTVLYLTLIVSLLYFIESLISHKLHINYNKIRLKRSPNLPLRFRDDGTFKILQVADMHF 68
Query: 55 ANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLN 114
G T C DVL S+ CSDLNTT F+ RMI +E+PDLI FTGDNIFG TDAA+SL
Sbjct: 69 GMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIAFTGDNIFGSSTTDAAESLL 128
Query: 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--------SDAHI 166
A PAI IPW AVLGNHD ESTL+R +M + + ++SQ+NP +
Sbjct: 129 EAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFSVSQINPLVEDETKGDTMRL 188
Query: 167 IDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSA 226
IDGFGNY + + G GS N +V +L+F DSGD V YGWIK SQ W + TS
Sbjct: 189 IDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQLRWLQDTSI 248
Query: 227 R--LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTT 284
+ QR +++ PA L +FHIP+ E + F G QEG++ + V SG T
Sbjct: 249 QGHSQRIHVNPPA--------LAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGVLQT 300
Query: 285 MVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTE 344
V+ G+VKA F GHDHVNDFCG L G+ CYGGGFGYHAYG+ W RRARV+ A L K
Sbjct: 301 FVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLGKG- 359
Query: 345 KRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGMR 382
+ W +K IKTWKRLDDE+L+ +D VLW + S ++
Sbjct: 360 RDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDSFLK 397
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q05924|DCR2_YEAST Phosphatase DCR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 170/343 (49%), Gaps = 38/343 (11%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++L+ G+FKI+Q+AD+H G++ C+D P A +D T F+ +++ EKP L
Sbjct: 238 QRLQETDEGKFKIVQLADLHLGVGESE-CIDEYPKHEACKADPKTETFVQQVLDIEKPQL 296
Query: 94 IVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
+VFTGD I G + D+ L A AP IA IPW V GNHD E +L+R + + L
Sbjct: 297 VVFTGDQIMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVL 356
Query: 153 KNTLSQVNPSDAHI-IDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV-PGY 210
+L + +P D H G GNY +I + V LYFLDS YSTV + PGY
Sbjct: 357 PYSLFKFSPHDTHDNTFGVGNYIYQIFSNNDT---EVPVGTLYFLDSHKYSTVGKIYPGY 413
Query: 211 GWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF-------DQSN 263
WIK SQ + E Y K + +FHIPLPE+ +++
Sbjct: 414 DWIKESQWKYIED--------YHDVNLKFKT-GLSMAFFHIPLPEYLNIESKTHPGEKNP 464
Query: 264 FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR----LTGIQLCYGGGF 319
G+ +EG+++ NS TT+ V V GHDH ND+C R I LCYGGG
Sbjct: 465 LIGMYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLCYGGGG 523
Query: 320 GYHAYGKAGW-ERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
G Y G ERR R+ ++ + +I TWKRL+
Sbjct: 524 GEGGYAGYGGTERRIRIYEINVNEN---------NIHTWKRLN 557
|
Required for cell cycle progression. Has a role in the completion of START. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|O59759|YJM5_SCHPO Uncharacterized protein C1020.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.05 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 155/355 (43%), Gaps = 60/355 (16%)
Query: 24 PTLAVNAKQERKLRF-------RQNGEFKILQVADMHFANGKTTPCLDVLPSQVA-GC-S 74
PT ++ A + ++L + KILQ++D+H++N PC D P + A C +
Sbjct: 181 PTPSIEALKRKELSSVTLTYDDEEKKTIKILQLSDLHYSNSDR-PCRDPYPYETAEDCMA 239
Query: 75 DLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNH 134
D TTAF+N ++ E+PD ++ TGD I G + DA SL A +P + N+P+ GNH
Sbjct: 240 DAKTTAFVNELLQLEEPDFVLLTGDLINGDTSRDARSSLMKAVSPFVDYNVPFAVNFGNH 299
Query: 135 DQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194
D LSRE + K LSQ+ P +I GN + GV + +Y
Sbjct: 300 DDLGDLSREELAK-------ILSQI-PGSMGLI---GN----VSGVGNFVLHSPRKFAIY 344
Query: 195 FLDS-GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
LD+ GD S PGY I Q W SK A K + HIPL
Sbjct: 345 VLDTKGDTSNRRLCPGYDAITEDQLEWLS-----------SKVADFKYEPIQMAVLHIPL 393
Query: 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
EF + + G +E S S+ + + + GHDHVNDFC GI
Sbjct: 394 KEFC--ETEDLVGAFREP-CSYSICDPNTAKALKSLRIPLAIAGHDHVNDFC----GIHP 446
Query: 314 CYGGGFGYHAYGKAGWE-------RRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
Y F + G RRARV L+ E ++++TWKRL+
Sbjct: 447 DYNTYFCFAGGAGFGGYGGHGGYVRRARVF--ELDPVE-------RAVRTWKRLE 492
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 160/397 (40%), Gaps = 84/397 (21%)
Query: 7 KKPAL--VIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLD 64
KKP+L +I+ VL++ PT + LR R+ FKI AD+HF T D
Sbjct: 2 KKPSLFQIIIIVLSI----PT--TTGRTVGNLRVREGSPFKIAIFADLHFGEDTWT---D 52
Query: 65 VLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSL--NAAFAPAIA 122
P Q D+N+ ++ ++ AE PD +V+ GD + + SL + A +P
Sbjct: 53 WGPGQ-----DVNSVNVMSAVLDAETPDFVVYLGDVVTANNIAIQNASLFWDKAISPTRD 107
Query: 123 SNIPWVAVLGNHDQESTL------------------------------SREGVMKHIVTL 152
IPW + GNHD S + +R +++ +
Sbjct: 108 RGIPWATLFGNHDDASFVWPLDWLSSSGIPPLRCPAASDDDGCTFRGTTRVELIQEEIKS 167
Query: 153 KNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGW 212
N LS S + NY L V+ S V LYFLDSG + P V
Sbjct: 168 SNALSYSMISPKELWPSVSNYVLL---VESSDHSKPPVALLYFLDSGG-GSYPEV----- 218
Query: 213 IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFA------YFDQSNFTG 266
I +Q WF+ S L Y+ P L+++HIP + + +
Sbjct: 219 ISNAQVEWFKTKSNTLN-PYLR--------IPELIFWHIPSKAYKKVAPRLWITKPCVGS 269
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFGYHAYG 325
+ +E + + +G + VKAVF GH+H D+C + LC+ GY YG
Sbjct: 270 INKEKVVAQEAENGMMRVLENRSSVKAVFVGHNHGLDWCCPYKDKLWLCFARHTGYGGYG 329
Query: 326 KAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
W R +R+ LE +E IKTW R++D
Sbjct: 330 N--WPRGSRI----LEISEMPF-----RIKTWIRMED 355
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q12212|SIA1_YEAST Protein SIA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 47/299 (15%)
Query: 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTG 98
R FKILQ+ D HF C D + + +++ T FI+R++++E PDL+V TG
Sbjct: 305 RGQRSFKILQITDFHFK------CTD---NSMTVINEIKTVNFIDRVLASENPDLVVITG 355
Query: 99 DNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
D + + D + P I++ IP+ LG D+ + + + I L T +
Sbjct: 356 DLLDSHNTIDYQTCIMKVVQPMISNKIPYAISLGVSDESNLATSAQIRDFIRNLPYTFNN 415
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQ 218
V + H+ +E+ K K+ L +D+ D + PS+
Sbjct: 416 VASEEGHMA-------IEVSFKKKL---TKNTLLERDIDTEDETN-----------PSEA 454
Query: 219 FWFEQTSARLQRAYMSKPAAQKAPAP-GLVYFHIPLPEF----------AYFDQSNFT-- 265
+F S ++ GL + + PL E+ Y ++S T
Sbjct: 455 LFFVFDSFAPVNNFLQDYNDLIGKIDFGLAFQYFPLSEYRPHGLFPIIGQYNERSTLTVD 514
Query: 266 GVRQEGISSASVNSGF---FTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFG 320
R G S ++N F +++ ++K V GH+H ND C + + LCYGG G
Sbjct: 515 TPRSRGQVSMTINGKHYKSFLDILSLWNIKGVSCGHEHNNDCCLQSKNEMWLCYGGSAG 573
|
Involved in the activation of the plasma membrane proton-ATPase (PMA1) by glucose. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q6CPQ2|SIA1_KLULA Protein SIA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SIA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 138/356 (38%), Gaps = 73/356 (20%)
Query: 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD 99
+ +FKILQ++D+HF + P + D FI+ +I E+PDL V TG
Sbjct: 274 KRADFKILQISDLHFGRHIVSDSRKEKPDSIFR-YDWPNVQFIHSVIRNERPDLAVITGH 332
Query: 100 NIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
F+ D + +P I++ IP++ G Q +T + ++ I +L L++
Sbjct: 333 IFKDFNKNLDYESQILKMVSPIISNGIPFLFTWG-EPQVTTEFKVNILNFIKSLPFCLNK 391
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS-VPGYGWIKPSQ 217
+ +N + L L L +P+ PG SQ
Sbjct: 392 FD------------------------LKNSTYLMLPLL-------LPAKTPG------SQ 414
Query: 218 Q-----FWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV---RQ 269
+ F F+ ++ K L + H+PL E Y Q +F + Q
Sbjct: 415 KQIGTIFAFDSNVTE-SYNFLDKFPRSPQSVYNLAFQHLPLHE--YRPQGSFALIGNYEQ 471
Query: 270 EGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQ--------LCYGGGFGY 321
+G ++ F ++ D+KA+ GH+H ND C G Q LCYGG GY
Sbjct: 472 KGSLDYIPHTKAFRNLLGEKDIKAISCGHEHGNDCCVLSDGKQQNLKNNMWLCYGGVTGY 531
Query: 322 HAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377
+E + R+ EK + I +WKR + D +WS+T
Sbjct: 532 ----DQAYESKVRIFKIDTEKND---------ITSWKRSIKDTSKVSDYQYIWSRT 574
|
May be involved in the activation of the plasma membrane proton-ATPase by glucose. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| 118484121 | 392 | unknown [Populus trichocarpa] | 0.951 | 0.946 | 0.815 | 0.0 | |
| 224130746 | 347 | predicted protein [Populus trichocarpa] | 0.889 | 1.0 | 0.847 | 1e-177 | |
| 255548145 | 379 | Phosphatase DCR2, putative [Ricinus comm | 0.964 | 0.992 | 0.783 | 1e-176 | |
| 296089042 | 381 | unnamed protein product [Vitis vinifera] | 0.943 | 0.965 | 0.758 | 1e-169 | |
| 356573279 | 385 | PREDICTED: probable inactive purple acid | 0.946 | 0.958 | 0.752 | 1e-169 | |
| 225453688 | 712 | PREDICTED: probable inactive purple acid | 0.984 | 0.539 | 0.730 | 1e-169 | |
| 358248738 | 404 | uncharacterized protein LOC100794167 [Gl | 0.948 | 0.915 | 0.738 | 1e-167 | |
| 225453684 | 396 | PREDICTED: probable inactive purple acid | 0.984 | 0.969 | 0.717 | 1e-167 | |
| 296089040 | 381 | unnamed protein product [Vitis vinifera] | 0.943 | 0.965 | 0.744 | 1e-166 | |
| 449445527 | 382 | PREDICTED: probable inactive purple acid | 0.946 | 0.965 | 0.760 | 1e-166 |
| >gi|118484121|gb|ABK93944.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/373 (81%), Positives = 330/373 (88%), Gaps = 2/373 (0%)
Query: 14 VAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGC 73
V V +L P + K+E LRFR+NGEFKILQVADMHFA+GKTT CLDV P+Q+ C
Sbjct: 17 VVVFSLCFFVPKSVLGVKKE--LRFRKNGEFKILQVADMHFADGKTTSCLDVFPNQMPTC 74
Query: 74 SDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGN 133
SDLNTTAF+ RMI AEKPD IVFTGDNIFGFDATDAAKSL+AAF PAIASNIPW A+LGN
Sbjct: 75 SDLNTTAFVERMIQAEKPDFIVFTGDNIFGFDATDAAKSLSAAFQPAIASNIPWAAILGN 134
Query: 134 HDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNL 193
HDQESTLSREGVMKHIV LKNTLSQVNP++ HIIDGFGNYNLEIGGVKGS FENKS LNL
Sbjct: 135 HDQESTLSREGVMKHIVGLKNTLSQVNPAEVHIIDGFGNYNLEIGGVKGSRFENKSALNL 194
Query: 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
YFLDSGDYSTVP++PGYGWIKPSQQ WF++TSA+L+RAYM +P AQK PAPGLVYFHIPL
Sbjct: 195 YFLDSGDYSTVPAIPGYGWIKPSQQLWFQRTSAKLRRAYMRQPEAQKGPAPGLVYFHIPL 254
Query: 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
PEFA FD SNFTGVRQEGISSASVNSGFFTTMV AGDVK VFTGHDH+NDFCG LTGIQL
Sbjct: 255 PEFASFDSSNFTGVRQEGISSASVNSGFFTTMVEAGDVKGVFTGHDHLNDFCGELTGIQL 314
Query: 314 CYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVL 373
CY GGFGYHAYGKAGW RRARVV+ASLEKTE+ GWG VKSIKTWKRLDDEHLT VDG VL
Sbjct: 315 CYAGGFGYHAYGKAGWSRRARVVLASLEKTEQGGWGAVKSIKTWKRLDDEHLTTVDGQVL 374
Query: 374 WSKTSSGMRRRKH 386
WSK+ +G+RR+K
Sbjct: 375 WSKSHAGVRRKKQ 387
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130746|ref|XP_002320917.1| predicted protein [Populus trichocarpa] gi|222861690|gb|EEE99232.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/347 (84%), Positives = 316/347 (91%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++LRF +NGEFKILQVADMHFA+GKTTPCLDV P+Q+ CSDLNTTAF+ RMI AEKPD
Sbjct: 1 QELRFGKNGEFKILQVADMHFADGKTTPCLDVFPNQMRSCSDLNTTAFVERMIQAEKPDF 60
Query: 94 IVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153
IVFTGDNIFGFDATDAAKSLNAAF PAI SNIPW AVLGNHDQ+STLSREGVMKH+V LK
Sbjct: 61 IVFTGDNIFGFDATDAAKSLNAAFWPAIESNIPWAAVLGNHDQDSTLSREGVMKHVVGLK 120
Query: 154 NTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWI 213
NTLSQVNP+++HIIDGFGNYNLEIGGVK S FENKS LNLYFLDSGDYSTVP++PGYGWI
Sbjct: 121 NTLSQVNPAESHIIDGFGNYNLEIGGVKDSCFENKSALNLYFLDSGDYSTVPAIPGYGWI 180
Query: 214 KPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS 273
KPSQQ WF++TSA L+RAYM +P AQK PAPGLVYFHIPLPEFA FD SN TGVRQEGIS
Sbjct: 181 KPSQQLWFQRTSANLRRAYMRQPEAQKGPAPGLVYFHIPLPEFASFDSSNVTGVRQEGIS 240
Query: 274 SASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRA 333
SASVNSGFFTTMV AGDVKAVFTGHDH+NDFCG LTGIQLCY GGFGYHAYGKAGW RRA
Sbjct: 241 SASVNSGFFTTMVEAGDVKAVFTGHDHLNDFCGELTGIQLCYAGGFGYHAYGKAGWSRRA 300
Query: 334 RVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSG 380
RVVVASLEKTEK GWG VKSIKTWKRLDDEHLT +DG VLWSK+ +G
Sbjct: 301 RVVVASLEKTEKGGWGAVKSIKTWKRLDDEHLTAIDGQVLWSKSRAG 347
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548145|ref|XP_002515129.1| Phosphatase DCR2, putative [Ricinus communis] gi|223545609|gb|EEF47113.1| Phosphatase DCR2, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 297/379 (78%), Positives = 329/379 (86%), Gaps = 3/379 (0%)
Query: 2 MVHRKKKPALVIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTP 61
MV +KKP L + +VL + L + ++L F +NG+FKILQVADMHFA+GKTTP
Sbjct: 1 MVVERKKPCLSLASVLAF---SQLLVIVLGVPKQLHFGKNGQFKILQVADMHFADGKTTP 57
Query: 62 CLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121
CLDV P+Q+ CSDLNTTAFI R+I AEKPDLIVFTGDNIFGFDATDAAKS+NAAFAPAI
Sbjct: 58 CLDVYPTQMPTCSDLNTTAFIKRVIRAEKPDLIVFTGDNIFGFDATDAAKSMNAAFAPAI 117
Query: 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVK 181
ASNIPWVAVLGNHDQESTLSREGVMKHIV LKNTLS+VNP +AH+IDGFGNYNLEIGGVK
Sbjct: 118 ASNIPWVAVLGNHDQESTLSREGVMKHIVDLKNTLSRVNPVEAHVIDGFGNYNLEIGGVK 177
Query: 182 GSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKA 241
GS FENKSVLNLYFLDSGDYSTVPS+PGYGWIKPSQ+FWF++TS RL+RAYMSKP AQK
Sbjct: 178 GSRFENKSVLNLYFLDSGDYSTVPSIPGYGWIKPSQEFWFQRTSQRLRRAYMSKPEAQKG 237
Query: 242 PAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHV 301
PAPGLVYFHIPLPEFA FD SNFTGV+QE ISS SVNSGFFT MV GDVKAVFTGHDH+
Sbjct: 238 PAPGLVYFHIPLPEFASFDSSNFTGVKQERISSPSVNSGFFTAMVETGDVKAVFTGHDHL 297
Query: 302 NDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
NDFCG+L GIQLCYGGGFGYHAYGKAGW RRARVV+ASLEK+++ WG VKSIKTWKRLD
Sbjct: 298 NDFCGQLNGIQLCYGGGFGYHAYGKAGWSRRARVVIASLEKSQQGEWGAVKSIKTWKRLD 357
Query: 362 DEHLTGVDGHVLWSKTSSG 380
D + T +DG LWSK +G
Sbjct: 358 DHNFTAIDGLALWSKGPAG 376
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089042|emb|CBI38745.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 279/368 (75%), Positives = 318/368 (86%)
Query: 22 IAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAF 81
+A A +K++ +LRF + G+FKILQVADMHF +GK+TPCL+VLP+Q+ GCSDLNT+AF
Sbjct: 13 LADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKSTPCLNVLPNQMRGCSDLNTSAF 72
Query: 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
I+RMI AEKP LIVFTGDNIFGFDA DA SLNAAFAPA++SNIPW AVLGNHDQESTLS
Sbjct: 73 IHRMIQAEKPHLIVFTGDNIFGFDAKDAVASLNAAFAPALSSNIPWAAVLGNHDQESTLS 132
Query: 142 REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201
REGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ GV+GS NKSVLNLYFLDSGDY
Sbjct: 133 REGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSGVEGSSLHNKSVLNLYFLDSGDY 192
Query: 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ 261
STVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P QK+ APGL YFHIPLPE A FD
Sbjct: 193 STVPSIFGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQKSAAPGLAYFHIPLPESASFDS 252
Query: 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHDHVNDFCG L GI LCY GGFGY
Sbjct: 253 SNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHDHVNDFCGELLGIHLCYAGGFGY 312
Query: 322 HAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGM 381
HAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKRLDD+HLT +D VLWSKTS+G
Sbjct: 313 HAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKRLDDKHLTVIDAQVLWSKTSAGS 372
Query: 382 RRRKHTNG 389
RR+K G
Sbjct: 373 RRKKKIGG 380
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573279|ref|XP_003554790.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 279/371 (75%), Positives = 322/371 (86%), Gaps = 2/371 (0%)
Query: 20 LCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT 79
C+ P ++Q+ +LRF +NGEFKILQ+AD+HFANGKTT CLDVLPSQ A CSDLNTT
Sbjct: 17 FCLIPFCF--SQQKLRLRFGKNGEFKILQIADLHFANGKTTHCLDVLPSQYASCSDLNTT 74
Query: 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQEST 139
AFI R+I +EKP+LIVFTGDNIFG+DA+D AKS++AAFAPAIASNIPWVAVLGNHDQE +
Sbjct: 75 AFIQRIILSEKPNLIVFTGDNIFGYDASDPAKSMDAAFAPAIASNIPWVAVLGNHDQEGS 134
Query: 140 LSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199
LSREGV+K+I +KNTLS VNP + HIIDGFGNYNLE+GGV+G+ FENKSVLNLYFLDSG
Sbjct: 135 LSREGVIKYIAGMKNTLSIVNPPEVHIIDGFGNYNLEVGGVEGTDFENKSVLNLYFLDSG 194
Query: 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF 259
DYS VP +PGYGWIKPSQQ WF++TS +L+ AYM+ P +QK PAPGL YFHIPLPE+A F
Sbjct: 195 DYSKVPFIPGYGWIKPSQQLWFQRTSQKLREAYMNGPVSQKEPAPGLAYFHIPLPEYASF 254
Query: 260 DQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGF 319
D SNFTGV+QEGISSASVNSGFFTT+V AGDVKAVFTGHDHVNDFCG+LTGI LCY GGF
Sbjct: 255 DSSNFTGVKQEGISSASVNSGFFTTLVEAGDVKAVFTGHDHVNDFCGKLTGIHLCYAGGF 314
Query: 320 GYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379
GYHAYGKAGW RRARVV+ SLEKT+ W DVKSIKTWKRLDD++LTG+DG VLWSK+
Sbjct: 315 GYHAYGKAGWSRRARVVLVSLEKTDNGRWEDVKSIKTWKRLDDQNLTGIDGQVLWSKSFG 374
Query: 380 GMRRRKHTNGA 390
RR+K +G+
Sbjct: 375 SNRRKKQDDGS 385
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453688|ref|XP_002269022.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 285/390 (73%), Positives = 326/390 (83%), Gaps = 6/390 (1%)
Query: 6 KKKPALVIVAVLTLL------CIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKT 59
KKK + A+L L +A A +K++ +LRF + G+FKILQVADMHF +GK+
Sbjct: 322 KKKTCYWMKAMLLALWFSGIHVLADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKS 381
Query: 60 TPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119
TPCL+VLP+Q+ GCSDLNT+AFI+RMI AEKP LIVFTGDNIFGFDA DA SLNAAFAP
Sbjct: 382 TPCLNVLPNQMRGCSDLNTSAFIHRMIQAEKPHLIVFTGDNIFGFDAKDAVASLNAAFAP 441
Query: 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGG 179
A++SNIPW AVLGNHDQESTLSREGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ G
Sbjct: 442 ALSSNIPWAAVLGNHDQESTLSREGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSG 501
Query: 180 VKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQ 239
V+GS NKSVLNLYFLDSGDYSTVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P Q
Sbjct: 502 VEGSSLHNKSVLNLYFLDSGDYSTVPSIFGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQ 561
Query: 240 KAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHD 299
K+ APGL YFHIPLPE A FD SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHD
Sbjct: 562 KSAAPGLAYFHIPLPESASFDSSNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHD 621
Query: 300 HVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKR 359
HVNDFCG L GI LCY GGFGYHAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKR
Sbjct: 622 HVNDFCGELLGIHLCYAGGFGYHAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKR 681
Query: 360 LDDEHLTGVDGHVLWSKTSSGMRRRKHTNG 389
LDD+HLT +D VLWSKTS+G RR+K G
Sbjct: 682 LDDKHLTVIDAQVLWSKTSAGSRRKKKIGG 711
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248738|ref|NP_001239932.1| uncharacterized protein LOC100794167 [Glycine max] gi|255636949|gb|ACU18807.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/382 (73%), Positives = 319/382 (83%), Gaps = 12/382 (3%)
Query: 11 LVIVAVLTLLCIAPTLAVNAKQ--------ERKLRFRQNGEFKILQVADMHFANGKTTPC 62
+V+V ++ C+ KQ + LRF QNGEFKILQVADMH+ANGKTTPC
Sbjct: 20 MVLVLSVSWFCLTSICVSATKQAYPPTPQPNQNLRFDQNGEFKILQVADMHYANGKTTPC 79
Query: 63 LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122
LDVLPSQ CSDLNTT F+NRMI AEKP+LIVFTGDNIFGFD++D+AKSL+AAFAPAIA
Sbjct: 80 LDVLPSQNFSCSDLNTTVFLNRMIKAEKPNLIVFTGDNIFGFDSSDSAKSLDAAFAPAIA 139
Query: 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKG 182
SNIPWVAVLGNHDQE TLSR GVM HIV +KNTLS+ NP + HIIDGFGNYNL++GGV+G
Sbjct: 140 SNIPWVAVLGNHDQEGTLSRAGVMNHIVGMKNTLSKFNPPEVHIIDGFGNYNLDVGGVQG 199
Query: 183 SGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAP 242
+ FENKSVLNLYFLDSGDYS V ++ GY WIKPSQQ WF++TSA+L++AY+SKP QK
Sbjct: 200 TDFENKSVLNLYFLDSGDYSQVSTIFGYDWIKPSQQLWFQRTSAKLKKAYISKPVPQKDA 259
Query: 243 APGLVYFHIPLPEFAYFDQSNFTGVRQE----GISSASVNSGFFTTMVAAGDVKAVFTGH 298
APGL YFHIPLPE+A FD SN TGV+QE GISS SVNSGFFTT++AAGDVKAVFTGH
Sbjct: 260 APGLAYFHIPLPEYASFDSSNMTGVKQEPDGNGISSPSVNSGFFTTLLAAGDVKAVFTGH 319
Query: 299 DHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWK 358
DH+NDFCG L IQLCYGGGFGYHAYGKAGW RRARVVVASLEKT K WGDVKSIKTWK
Sbjct: 320 DHINDFCGNLMNIQLCYGGGFGYHAYGKAGWPRRARVVVASLEKTGKGSWGDVKSIKTWK 379
Query: 359 RLDDEHLTGVDGHVLWSKTSSG 380
RLDD+HLTG+DG VLWSK++ G
Sbjct: 380 RLDDQHLTGIDGEVLWSKSTGG 401
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453684|ref|XP_002269908.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/390 (71%), Positives = 324/390 (83%), Gaps = 6/390 (1%)
Query: 6 KKKPALVIVAVLTLL------CIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKT 59
KKK + A+L L +A A +K++ +LRF + G+FKILQVADMHF +GK+
Sbjct: 6 KKKTCYWMKAMLLALWFSGIHVLADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKS 65
Query: 60 TPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119
TPC +VLP+Q+ GCSDLNT+AFI+RMI AEKP LIVFTGDNI+G DA DA SLNAAFAP
Sbjct: 66 TPCKNVLPNQMRGCSDLNTSAFIHRMIQAEKPHLIVFTGDNIYGKDAKDAVASLNAAFAP 125
Query: 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGG 179
A++SNIPW AVLGNHDQ+STLSREGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ G
Sbjct: 126 ALSSNIPWAAVLGNHDQQSTLSREGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSG 185
Query: 180 VKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQ 239
V+GS NKSVLNLYFLDSGDYSTVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P Q
Sbjct: 186 VEGSSLHNKSVLNLYFLDSGDYSTVPSISGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQ 245
Query: 240 KAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHD 299
K+ APGL YFHIPLPE A FD SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHD
Sbjct: 246 KSAAPGLAYFHIPLPECASFDSSNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHD 305
Query: 300 HVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKR 359
H+NDFCG L GI LCY GGFGYHAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKR
Sbjct: 306 HLNDFCGELLGIHLCYAGGFGYHAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKR 365
Query: 360 LDDEHLTGVDGHVLWSKTSSGMRRRKHTNG 389
LDD+HLT +D VLWSKTS+G RR+K G
Sbjct: 366 LDDKHLTVIDAQVLWSKTSAGSRRKKKIGG 395
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089040|emb|CBI38743.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 274/368 (74%), Positives = 316/368 (85%)
Query: 22 IAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAF 81
+A A +K++ +LRF + G+FKILQVADMHF +GK+TPC +VLP+Q+ GCSDLNT+AF
Sbjct: 13 LADAAAAVSKEQNQLRFSKEGQFKILQVADMHFGDGKSTPCKNVLPNQMRGCSDLNTSAF 72
Query: 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
I+RMI AEKP LIVFTGDNI+G DA DA SLNAAFAPA++SNIPW AVLGNHDQ+STLS
Sbjct: 73 IHRMIQAEKPHLIVFTGDNIYGKDAKDAVASLNAAFAPALSSNIPWAAVLGNHDQQSTLS 132
Query: 142 REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201
REGVMK+IV +K++LSQ+NP +IIDGFGNYNLE+ GV+GS NKSVLNLYFLDSGDY
Sbjct: 133 REGVMKYIVGMKHSLSQLNPPGVNIIDGFGNYNLEVSGVEGSSLHNKSVLNLYFLDSGDY 192
Query: 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ 261
STVPS+ GYGWIKPSQQFWF++TS +L+RAYMS P QK+ APGL YFHIPLPE A FD
Sbjct: 193 STVPSISGYGWIKPSQQFWFQRTSKKLRRAYMSNPEGQKSAAPGLAYFHIPLPECASFDS 252
Query: 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
SNFTGV+QEGISSASVNSGFFTTMV AGDVKA FTGHDH+NDFCG L GI LCY GGFGY
Sbjct: 253 SNFTGVKQEGISSASVNSGFFTTMVEAGDVKAAFTGHDHLNDFCGELLGIHLCYAGGFGY 312
Query: 322 HAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGM 381
HAYGKAGW RRARVV+A+LE+ EK GWG+VKSIKTWKRLDD+HLT +D VLWSKTS+G
Sbjct: 313 HAYGKAGWARRARVVLATLEEREKGGWGEVKSIKTWKRLDDKHLTVIDAQVLWSKTSAGS 372
Query: 382 RRRKHTNG 389
RR+K G
Sbjct: 373 RRKKKIGG 380
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445527|ref|XP_004140524.1| PREDICTED: probable inactive purple acid phosphatase 29-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/371 (76%), Positives = 311/371 (83%), Gaps = 2/371 (0%)
Query: 12 VIVAVLTLLCIAPT--LAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
+ + +L L PT AV Q +LRF +NGEFKILQVADMH+ANGK+TPC DVLP Q
Sbjct: 9 LFLILLFSLTFPPTKSTAVQRNQPMRLRFGKNGEFKILQVADMHYANGKSTPCEDVLPDQ 68
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVA 129
++ CSDLNTTAF+ RMI AEKPD IVFTGDNIFG+DATDAAKSL+AAFAPAIASNIPW A
Sbjct: 69 ISSCSDLNTTAFLRRMILAEKPDFIVFTGDNIFGYDATDAAKSLDAAFAPAIASNIPWAA 128
Query: 130 VLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKS 189
VLGNHDQESTLSREGVMKHIV LK+TLS+VNPS I+GFGNYNLE+ GVKGS FENKS
Sbjct: 129 VLGNHDQESTLSREGVMKHIVGLKSTLSKVNPSGMKTINGFGNYNLEVSGVKGSDFENKS 188
Query: 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYF 249
VLNLYFLDSGDYSTVP + GY WIKPSQQFWF+ TSA+L+RAYM KP QK APGL +F
Sbjct: 189 VLNLYFLDSGDYSTVPRIVGYSWIKPSQQFWFQLTSAKLKRAYMDKPFPQKTAAPGLTFF 248
Query: 250 HIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT 309
HIPLPEF+ FD SN+TGVRQE ISS VNSGFFT MV AGDVKAVFTGHDH+NDFCG T
Sbjct: 249 HIPLPEFSNFDASNYTGVRQEEISSPPVNSGFFTAMVEAGDVKAVFTGHDHLNDFCGLFT 308
Query: 310 GIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVD 369
GI LCYGGGFGYHAYGKAGW RRARVVVA+LE+T K WG VKSI+TWKRLDD+HLT +D
Sbjct: 309 GINLCYGGGFGYHAYGKAGWSRRARVVVANLERTAKGNWGSVKSIRTWKRLDDKHLTRID 368
Query: 370 GHVLWSKTSSG 380
VLWSK S G
Sbjct: 369 SQVLWSKNSLG 379
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| TAIR|locus:2161937 | 389 | PAP29 "AT5G63140" [Arabidopsis | 0.925 | 0.928 | 0.709 | 1.7e-139 | |
| TAIR|locus:2041379 | 401 | PAP14 "AT2G46880" [Arabidopsis | 0.941 | 0.915 | 0.557 | 1.3e-107 | |
| TAIR|locus:2175594 | 397 | PAP28 "AT5G57140" [Arabidopsis | 0.866 | 0.851 | 0.512 | 1.7e-89 | |
| CGD|CAL0002750 | 728 | orf19.843 [Candida albicans (t | 0.841 | 0.450 | 0.377 | 3.1e-51 | |
| ASPGD|ASPL0000009456 | 548 | AN10446 [Emericella nidulans ( | 0.728 | 0.518 | 0.366 | 7.3e-43 | |
| SGD|S000004353 | 578 | DCR2 "Phosphoesterase involved | 0.782 | 0.527 | 0.364 | 1.1e-41 | |
| DICTYBASE|DDB_G0278297 | 400 | DDB_G0278297 "metallophosphoes | 0.728 | 0.71 | 0.319 | 1.8e-32 | |
| DICTYBASE|DDB_G0283451 | 404 | DDB_G0283451 "Phosphatase DCR2 | 0.648 | 0.626 | 0.367 | 2.3e-32 | |
| ASPGD|ASPL0000011457 | 391 | AN3982 [Emericella nidulans (t | 0.746 | 0.744 | 0.301 | 7e-23 | |
| POMBASE|SPCC1020.05 | 509 | SPCC1020.05 "phosphoprotein ph | 0.425 | 0.326 | 0.356 | 2.9e-17 |
| TAIR|locus:2161937 PAP29 "AT5G63140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 259/365 (70%), Positives = 292/365 (80%)
Query: 17 LTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL 76
L LC++P A Q RKLRF NGEFKILQVADMHFANG T C +VLPSQ A CSDL
Sbjct: 22 LACLCLSPIPAT--AQRRKLRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDL 79
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136
NTT F++R+I+AEKPDLIVFTGDNIFGFD DA KS+NAAFAPAIAS IPWVA+LGNHDQ
Sbjct: 80 NTTIFMSRVIAAEKPDLIVFTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQ 139
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSDA-HIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195
EST +R+ VM HIV L NTLSQVNP +A H IDGFGNYNL+I G S +NKSVLNLYF
Sbjct: 140 ESTFTRQQVMNHIVKLPNTLSQVNPPEAAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYF 199
Query: 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
LDSGDYS+VP + GY WIK SQQFWF++TS RL+R Y +KP Q+ APGL YFHIPLPE
Sbjct: 200 LDSGDYSSVPYMEGYDWIKTSQQFWFDRTSKRLKREYNAKPNPQEGIAPGLAYFHIPLPE 259
Query: 256 FAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
F FD N T GVRQEG S+AS NSGFFTT++A GDVK+VF GHDHVNDFCG L G+ LC
Sbjct: 260 FLSFDSKNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLC 319
Query: 315 YGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374
YGGGFGYHAYGKAGWERRARVVV L K K WG VKSIKTWKRLDD+HL+ +D VLW
Sbjct: 320 YGGGFGYHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLW 379
Query: 375 SKTSS 379
+ +++
Sbjct: 380 NNSAN 384
|
|
| TAIR|locus:2041379 PAP14 "AT2G46880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 209/375 (55%), Positives = 264/375 (70%)
Query: 12 VIVAVLTLLCIAPTLAVNAKQ--ERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQ 69
V+ L LC++ T V+A R+LRF +G FKILQV+DMH+ GK T C DV P++
Sbjct: 13 VLSVSLIYLCLS-TCHVSAFDFGRRQLRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAE 71
Query: 70 VAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAIASNIPWV 128
CSDLNTT+F+ R I++EKPDLIVF+GDN++G + +D AKS++ AFAPAI S IPWV
Sbjct: 72 FPYCSDLNTTSFLQRTIASEKPDLIVFSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWV 131
Query: 129 AVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFE 186
A+LGNHDQES ++RE +MK+I+ L N+LSQVNP DA + IDGFGNYNL+I G GS
Sbjct: 132 AILGNHDQESDMTRETMMKYIMKLPNSLSQVNPPDAWLYQIDGFGNYNLQIEGPFGSPLF 191
Query: 187 NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPG 245
KS+LNLY LD G Y+ + Y W+K SQQ W+E TS L+ + P Q + APG
Sbjct: 192 FKSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251
Query: 246 LVYFHIPLPEFAYFDQSN-FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDF 304
LVY HIP+PEFA F++S TGVRQE S +NSGFFT +V G+VK VF+GHDHVNDF
Sbjct: 252 LVYLHIPMPEFALFNKSTEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDF 311
Query: 305 CGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEH 364
C L GI LCY GG GYH YG+ GW RR RVV A LEKT WG V +IKTWKRLDD++
Sbjct: 312 CAELHGINLCYAGGAGYHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKN 371
Query: 365 LTGVDGHVLWSKTSS 379
+ +D +LW+K ++
Sbjct: 372 HSLIDTQLLWTKNTT 386
|
|
| TAIR|locus:2175594 PAP28 "AT5G57140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 183/357 (51%), Positives = 225/357 (63%)
Query: 36 LRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIV 95
LRFR +G FKILQVADMHF G T C DVL S+ CSDLNTT F+ RMI +E+PDLI
Sbjct: 50 LRFRDDGTFKILQVADMHFGMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIA 109
Query: 96 FTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNT 155
FTGDNIFG TDAA+SL A PAI IPW AVLGNHD ESTL+R +M + + +
Sbjct: 110 FTGDNIFGSSTTDAAESLLEAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFS 169
Query: 156 LSQVNP-------SDA-HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV 207
+SQ+NP D +IDGFGNY + + G GS N +V +L+F DSGD V
Sbjct: 170 VSQINPLVEDETKGDTMRLIDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGK 229
Query: 208 PGYGWIKPSQQFWFEQTSAR--LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFT 265
YGWIK SQ W + TS + QR +++ PA L +FHIP+ E + F
Sbjct: 230 RTYGWIKESQLRWLQDTSIQGHSQRIHVNPPA--------LAFFHIPILEVRELWYTPFI 281
Query: 266 GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325
G QEG++ + V SG T V+ G+VKA F GHDHVNDFCG L G+ CYGGGFGYHAYG
Sbjct: 282 GQFQEGVACSIVQSGVLQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYG 341
Query: 326 KAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSGMR 382
+ W RRARV+ A L K W +K IKTWKRLDDE+L+ +D VLW + S ++
Sbjct: 342 RPNWHRRARVIEAKLGKGRDT-WEGIKLIKTWKRLDDEYLSKIDEQVLWETSDSFLK 397
|
|
| CGD|CAL0002750 orf19.843 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 137/363 (37%), Positives = 189/363 (52%)
Query: 28 VNAKQERKLRFRQNGE--FKILQVADMHFANGKTTPCLDVLP-SQVAGC-SDLNTTAFIN 83
++ K+E N E FKILQ+AD+HF+ G CLD P S GC +D T FIN
Sbjct: 379 IDYKKEIGTTLTMNSEDKFKILQIADLHFSTGYGK-CLDPQPPSSAKGCKADSRTLEFIN 437
Query: 84 RMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSRE 143
+++ EKPD++V TGD IFG + D+ S A P + IP+ +GNHD E +L RE
Sbjct: 438 KVLDLEKPDMVVLTGDQIFGDASPDSESSAFKALNPFVERKIPFAITVGNHDDEGSLKRE 497
Query: 144 GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203
+M + +++ + P+ IDGFGNY + + G K S + L+LYF+DS YS
Sbjct: 498 EIMGLYADMPYSVAAMGPAS---IDGFGNYVVTVQG-KSS---KATALSLYFVDSHAYSK 550
Query: 204 VPSV-PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQS 262
P V PGY WIK +Q + +Q + +Q + + K P + +FHIPLPEF +Q
Sbjct: 551 TPKVTPGYDWIKENQLIYLKQEAESIQNSVEKYRKSNKIPL-AMAFFHIPLPEFRNLNQP 609
Query: 263 NFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT------G---IQL 313
F G +EG+++ NSG + G V GHDH ND+C + T G + L
Sbjct: 610 -FIGENREGVTAPRYNSGARQVLSEIG-VSVASVGHDHCNDYCLQDTQQSSSPGDNKMWL 667
Query: 314 CYGGGFGYHAYGKA-GWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHV 372
C+GGG G YG G+ RR RV K E IKTWKR +D +D V
Sbjct: 668 CFGGGAGLGGYGGYNGYIRRMRVYELDTSKGE---------IKTWKRTEDNPGNIIDEQV 718
Query: 373 LWS 375
L S
Sbjct: 719 LVS 721
|
|
| ASPGD|ASPL0000009456 AN10446 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 114/311 (36%), Positives = 157/311 (50%)
Query: 37 RFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVA---GC-SDLNTTAFINRMISAEKPD 92
R +NG FKI+Q+AD+H + G C D +P ++ GC +D T FI R++ E+PD
Sbjct: 211 RINENGRFKIMQLADLHLSTG-LGHCRDPVPPELIPGQGCEADPRTLDFIERLLDEEQPD 269
Query: 93 LIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
L++ +GD + G + DA L + + IP+ A+ GNHD E L R M + L
Sbjct: 270 LVILSGDQVNGETSRDAQSPLFKSVKLLVDRKIPYAAIFGNHDDEGNLDRHQSMAILEDL 329
Query: 153 KNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP-SVPGYG 211
+LS P D IDG GNY +E V G G + S L LY LDS YS GY
Sbjct: 330 PYSLSSAGPED---IDGVGNYIVE---VLGRGNTDHSALTLYLLDSHSYSPDERQFRGYD 383
Query: 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSN-FTGVRQE 270
WIKP+Q WF+ T+ L+ + + + HIPLPEFA + N F G E
Sbjct: 384 WIKPNQIRWFKTTAQGLKAKHQQYAYMHM----NMAFIHIPLPEFA--QRGNYFRGNWSE 437
Query: 271 GISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCG------RLTGIQLCYGGGFGYHAY 324
++ NSGF + G + V GHDH ND+C + + +CYGGG G+ Y
Sbjct: 438 PSTAPGFNSGFKDALEEEG-ILFVGCGHDHANDYCALSKNEAQKPSLWMCYGGGAGFGGY 496
Query: 325 GK-AGWERRAR 334
G G+ RR R
Sbjct: 497 GGYGGFIRRVR 507
|
|
| SGD|S000004353 DCR2 "Phosphoesterase involved in downregulation of the UPR" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 125/343 (36%), Positives = 172/343 (50%)
Query: 34 RKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDL 93
++L+ G+FKI+Q+AD+H G++ C+D P A +D T F+ +++ EKP L
Sbjct: 238 QRLQETDEGKFKIVQLADLHLGVGESE-CIDEYPKHEACKADPKTETFVQQVLDIEKPQL 296
Query: 94 IVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152
+VFTGD I G + D+ L A AP IA IPW V GNHD E +L+R + + L
Sbjct: 297 VVFTGDQIMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVL 356
Query: 153 KNTLSQVNPSDAHIID-GFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSV-PGY 210
+L + +P D H G GNY +I + E V LYFLDS YSTV + PGY
Sbjct: 357 PYSLFKFSPHDTHDNTFGVGNYIYQI--FSNNDTE-VPVGTLYFLDSHKYSTVGKIYPGY 413
Query: 211 GWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFD------QSN- 263
WIK SQ + E Y K + +FHIPLPE+ + + N
Sbjct: 414 DWIKESQWKYIED--------YHDVNLKFKTGL-SMAFFHIPLPEYLNIESKTHPGEKNP 464
Query: 264 FTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG----IQLCYGGGF 319
G+ +EG+++ NS TT+ V V GHDH ND+C R I LCYGGG
Sbjct: 465 LIGMYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLCYGGGG 523
Query: 320 GYHAY-GKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361
G Y G G ERR R+ ++ + +I TWKRL+
Sbjct: 524 GEGGYAGYGGTERRIRIYEINVNEN---------NIHTWKRLN 557
|
|
| DICTYBASE|DDB_G0278297 DDB_G0278297 "metallophosphoesterase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 103/322 (31%), Positives = 149/322 (46%)
Query: 29 NAKQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA 88
N + + KLRF +N +FKI+Q D+HF G+ + + D+N+TA +N++I
Sbjct: 58 NNENKNKLRFNKNNKFKIIQFTDLHFGEGEN----EAWGKE----QDINSTAVMNKIIDK 109
Query: 89 E-KPDLIVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVM 146
E DLI+FTGD I G + + +K A A NIPW GNHD S+ + G
Sbjct: 110 EGNVDLILFTGDLITGNNINGNVSKYWENAINVAKTRNIPWAITFGNHDDLSS-NDNGTR 168
Query: 147 KHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN-LYFLDSGDYSTVP 205
+++L L ++ I G NYNL I G EN +L+ L+ DSGD
Sbjct: 169 YDLISLDIKLGSLSKLGPISIPGVSNYNLNI-----YGNENDRILSTLWLFDSGDGENDC 223
Query: 206 SVP-----GYGW-----IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPE 255
G G+ I Q W+E + + + K P +FHIPL E
Sbjct: 224 KNQRNREFGNGYQCNTFITKEQIQWYENETLKYEN--------DKLPLWEGAFFHIPLQE 275
Query: 256 FAY-FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ ++ G + I+ N G F V G ++ + GH+H NDFC I++C
Sbjct: 276 YMLVWNYGVCFGFNNDSIACQKTNEGLFKKFVEIGRIRMISVGHNHGNDFCSIFDNIKMC 335
Query: 315 YGGGFGYHAYGKAGWERRARVV 336
YG GY YG WER ARV+
Sbjct: 336 YGRHSGYGGYGT--WERGARVI 355
|
|
| DICTYBASE|DDB_G0283451 DDB_G0283451 "Phosphatase DCR2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 107/291 (36%), Positives = 143/291 (49%)
Query: 83 NRMISAEKP-DLIVFTGDNIFGF--DATDA---AKSLNAAFAPAIASNIPWVAVLGNHDQ 136
N +++AE DL+V TGD++ G+ + T+ K ++ P I NI W LGNHD
Sbjct: 74 NGVLTAEPDGDLVVMTGDSVSGYAWNGTEGWFIEKWIHLV-EPMIKHNIRWAFTLGNHDD 132
Query: 137 ESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196
E+ L R +++ T +L+Q PSD I G NY L I SG E ++L YF
Sbjct: 133 EADLDRVQIVELDNTFNLSLTQRGPSD---IRGATNYYLPITD-PSSG-EVATIL--YFF 185
Query: 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
DSGD V G+G + P Q W+ S L+ Y + PA + + HIP+PE
Sbjct: 186 DSGD-DNCQGVEGWGCVYPDQIEWYRTVSMGLREKY-----GRVVPA--IAFMHIPIPE- 236
Query: 257 AYFDQSNFTGVR----QEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQ 312
Y D NF V G+ SVN+G F GD+ ++ GHDH NDF G G+Q
Sbjct: 237 -YMDMWNFYPVNGSLYDTGVCCFSVNTGLFAAFKEMGDIISMHCGHDHDNDFIGEYNGVQ 295
Query: 313 LCYGGGFGYHAYGK-AGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
L YG GY YG GW+ ARV LE T + SI T+ R DD
Sbjct: 296 LGYGRKSGYGGYGPPTGWKHGARV----LEIT-----ANPFSISTYLRFDD 337
|
|
| ASPGD|ASPL0000011457 AN3982 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 108/358 (30%), Positives = 156/358 (43%)
Query: 36 LRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLI 94
LRF + G F+I +D+HFA + T +Q A D T + +++ E L+
Sbjct: 6 LRFSKEGTFQITVFSDLHFAEYENT-------AQGAK-QDSRTAGVVRKVLQHEASTQLV 57
Query: 95 VFTGDNIFGFDAT--DAAKSLNAAFAPAIASNIPWVAVLGNHDQES-TLSREGVMKHIVT 151
V GD I G+ T +A + L+ AP A +PW GNHD E SRE + T
Sbjct: 58 VLNGDLISGYGTTSDNATRYLDQVLAPIQALGLPWAVTYGNHDNERFARSRELLDYESRT 117
Query: 152 LKN-TLSQ-VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG 209
N +L++ + P D G NY LE+ + S + L+F DS P
Sbjct: 118 YPNYSLTRNMGPRDLEA--GVSNYYLEVFAAETSHVPE---MLLWFFDSRG-GAQP---- 167
Query: 210 YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV-- 267
+ W+ S WF T+A L Y KA P + +FHIP+ A +D + GV
Sbjct: 168 HDWVHDSVVQWFIDTNANLTNKY------NKA-VPSIAFFHIPIT--ATYDFQLYPGVDT 218
Query: 268 -RQEGISSASV---------NSG----FFTTMVAAGDVKAVFTGHDHVNDFCGRL----- 308
R+ GI+ V +G F + A + A F+GHDH ND+C +
Sbjct: 219 SREPGINGEKVWWQGRGYDGKTGHDLKFMAALSATEGMLATFSGHDHDNDWCFKWKSPSA 278
Query: 309 ----TGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362
G+ +CYG GY YG G R AR ++ + T K + TW RL+D
Sbjct: 279 TSSSAGLNVCYGRHTGYGGYG--GLARGARQILLK-QSTIK------DEVATWIRLED 327
|
|
| POMBASE|SPCC1020.05 SPCC1020.05 "phosphoprotein phosphatase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 236 (88.1 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 66/185 (35%), Positives = 91/185 (49%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVA-GC-SDLNTTAFINRMISAEKPDLIVFTGDNIF 102
KILQ++D+H++N PC D P + A C +D TTAF+N ++ E+PD ++ TGD I
Sbjct: 209 KILQLSDLHYSNSDR-PCRDPYPYETAEDCMADAKTTAFVNELLQLEEPDFVLLTGDLIN 267
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
G + DA SL A +P + N+P+ GNHD LSRE + K LSQ+ P
Sbjct: 268 GDTSRDARSSLMKAVSPFVDYNVPFAVNFGNHDDLGDLSREELAK-------ILSQI-PG 319
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS-GDYSTVPSVPGYGWIKPSQQFWF 221
+I GN + GV + +Y LD+ GD S PGY I Q W
Sbjct: 320 SMGLI---GN----VSGVGNFVLHSPRKFAIYVLDTKGDTSNRRLCPGYDAITEDQLEWL 372
Query: 222 EQTSA 226
A
Sbjct: 373 SSKVA 377
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9FMK9 | PPA29_ARATH | No assigned EC number | 0.7027 | 0.9384 | 0.9408 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 9e-46 | |
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 3e-33 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-10 | |
| cd07385 | 223 | cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and re | 3e-07 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 1e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-06 | |
| TIGR00619 | 253 | TIGR00619, sbcd, exonuclease SbcD | 1e-05 | |
| COG1408 | 284 | COG1408, COG1408, Predicted phosphohydrolases [Gen | 4e-04 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 4e-04 | |
| cd00840 | 223 | cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal m | 9e-04 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 0.001 | |
| PRK11340 | 271 | PRK11340, PRK11340, phosphodiesterase YaeI; Provis | 0.004 | |
| COG0420 | 390 | COG0420, SbcD, DNA repair exonuclease [DNA replica | 0.004 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 9e-46
Identities = 57/119 (47%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 209 GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF--AYFDQSNFTG 266
GY WI+PSQ WF++TSA L++ Y P P L +FHIPLPE+ + + G
Sbjct: 88 GYDWIRPSQIEWFKETSAALKKKY-------GKPIPSLAFFHIPLPEYREVWEGKGKVPG 140
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325
+ E + +NSG F ++ GDVK VF GHDH NDFCGR GI LCYG G GY YG
Sbjct: 141 INNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 3e-33
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNI 101
G+FKILQ AD+HF G+ T +DL T AFI R++ AEKPDL+V TGD I
Sbjct: 1 GKFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLI 52
Query: 102 FGFDATD-AAKSLNAAFAPAIASNIPWVAVLGNHD 135
G + D + +L+ A +P I IPW A GNHD
Sbjct: 53 TGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 59.0 bits (142), Expect = 2e-10
Identities = 40/257 (15%), Positives = 65/257 (25%), Gaps = 73/257 (28%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+IL + D+H G DL+ + ++ KPDL++F GD +
Sbjct: 1 RILVIGDLHG-----------------GLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRG 43
Query: 105 DATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDA 164
+ +L FA + + P V GNHD
Sbjct: 44 PPSLEVLAL--LFALKLKAPGPVYLVRGNHD---------------------------FD 74
Query: 165 HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQT 224
G Y G G + S + + G G ++F
Sbjct: 75 SGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLY------GKGGGLVWEEFLEL-- 126
Query: 225 SARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTT 284
+ ++ H PL +
Sbjct: 127 --------LDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLF-----------GEEALED 167
Query: 285 MVAAGDVKAVFTGHDHV 301
++ V V GH HV
Sbjct: 168 LLKDNGVDLVLRGHTHV 184
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 25/99 (25%)
Query: 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLIVFTGD 99
+I ++D+H + + R++ A KPDL+V TGD
Sbjct: 1 GLRIAHLSDLHL-------------------GPFVSRERLERLVEKINALKPDLVVLTGD 41
Query: 100 NIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138
+ G + D + L + + + AVLGNHD S
Sbjct: 42 LVDG--SVDVLELL-LELLKKLKAPLGVYAVLGNHDYYS 77
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 63/277 (22%), Positives = 96/277 (34%), Gaps = 81/277 (29%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD--NIF 102
+ Q++D+H L V + S A IN + +PDL++ TGD +
Sbjct: 1 LLAQISDLHLRADGEGALLGVDTAA----SLEAVLAHINAL--HPRPDLVLVTGDLTD-- 52
Query: 103 GFDATDAAKSLNAAFAPAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
D + + +A IP + GNHD ++ ++ P
Sbjct: 53 --DGSPESY---ERLRELLAALPIPVYLLPGNHD------------DRAAMRAVFPELPP 95
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG--YGWIKPSQQF 219
+ GF Y +++GG L LDS SVPG G + +Q
Sbjct: 96 A-----PGFVQYVVDLGG-----------WRLILLDS-------SVPGQHGGELCAAQLD 132
Query: 220 WFEQTSARLQRAYMSKPAAQKAPAPGLVYFH---IPLPEFAYFDQSNFTGVRQEGISSAS 276
W E A L A P LV+ H P+ A+ D G+R + A
Sbjct: 133 WLE---AALAEA---------PDKPTLVFLHHPPFPVG-IAWMDAI---GLRN---AEA- 172
Query: 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQL 313
+ +V+A+ GH H G GI L
Sbjct: 173 ----LAAVLARHPNVRAILCGHVH-RPIDGSWGGIPL 204
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-06
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 72 GCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVL 131
G + + +AEKPD ++ GD + D D + L AA A + IP V
Sbjct: 8 GNLEALEAVLEAALAAAEKPDFVLVLGDLVG--DGPDPEEVLAAALALLLLLGIPVYVVP 65
Query: 132 GNHD 135
GNHD
Sbjct: 66 GNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|233056 TIGR00619, sbcd, exonuclease SbcD | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+IL +D H GKT + L Q A DL A AE+ D ++ GD
Sbjct: 2 RILHTSDWHL--GKTLEGVSRLAEQKAFLDDLLEFA------KAEQIDALLVAGDVFDTA 53
Query: 105 DATDAAKSLNAAFAPAI--ASNIPWVAVLGNHDQESTLS 141
+ A+ L AF + A+ IP V + GNHD LS
Sbjct: 54 NPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSAQRLS 92
|
All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs). This complex functions in the initiation of recombination and recombinational repair and is particularly important in regulating the stability of DNA sections that can form secondary structures. This family is likely homologous to the MRE11 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]. Length = 253 |
| >gnl|CDD|224326 COG1408, COG1408, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 37/178 (20%), Positives = 53/178 (29%), Gaps = 37/178 (20%)
Query: 12 VIVAVLTLLCIAPTLAVNA---KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPS 68
+ +A L L V + Q KI+Q++D+H L +L +
Sbjct: 12 IALASYAHLLEPGWLRVVKLTILTPKLPASLQG--LKIVQLSDLHSLPF-REEKLALLIA 68
Query: 69 QVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNA----AFAPAIASN 124
I+ E PDLIV TGD + G A +
Sbjct: 69 -----------------IANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLGV--- 108
Query: 125 IPWVAVLGNHDQESTLSREGVM----KHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178
AVLGNHD S + + + V A I+ G G
Sbjct: 109 ---FAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEVGGLDLYLAG 163
|
Length = 284 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 4e-04
Identities = 62/309 (20%), Positives = 90/309 (29%), Gaps = 72/309 (23%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD--NI 101
+I ++D+H L V ++ A + I KPDL+V TGD N
Sbjct: 1 MRIAHISDLHLGA------LGVDSEELLE-------ALLAA-IEQLKPDLLVVTGDLTN- 45
Query: 102 FGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
D + P + V GNHD
Sbjct: 46 ---DGEPEEYRRLKELLARLELPAPVIVVPGNHD----------------------ARVV 80
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWF 221
+ D F N + G SG V+ L D S G + Q W
Sbjct: 81 NGEAFSDQFFNRYAVLVGACSSG--GWRVIGL------DSSVPGVPLGR--LGAEQLDWL 130
Query: 222 EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281
E+ A A ++A +V H PLP S TGV + + A
Sbjct: 131 EEALAA---------APERAKDTVVVLHHHPLP-------SPGTGVDRVALRDAGELLDV 174
Query: 282 FTTMVAAGDVKAVFTGHDHV-NDFCGRLTGIQLCYGGGFGYHAYG-KAGWERRARVVVAS 339
+ DV+ V +GH H+ +L G +L A +
Sbjct: 175 L--IAHGNDVRLVLSGHIHLAAQTVYQLNGTRLSDLLVGAGPATCSQVFRGSATAFNTLD 232
Query: 340 LEKTEKRGW 348
L+ R
Sbjct: 233 LDGPGVRVL 241
|
Length = 301 |
| >gnl|CDD|163616 cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 9e-04
Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 20/99 (20%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT-AFINRMIS---AEKPDLIVFTGDN 100
+ L AD H L ++ ++ EK D ++ GD
Sbjct: 1 RFLHTADWH---------LGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDL 51
Query: 101 IFGFD----ATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135
FD + +A + L A + IP + GNHD
Sbjct: 52 ---FDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHD 87
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 60/236 (25%), Positives = 85/236 (36%), Gaps = 75/236 (31%)
Query: 82 INRMISAEKPDLIVFTGDNIFGF----DATDAAKSLNAAFAPAIASNIPWVAVLGNHDQE 137
IN++ KP +V GD + L + + +IP V V GNHD
Sbjct: 43 INKL--NPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS-LLDPDIPLVCVCGNHDVG 99
Query: 138 STLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGN--YNLEIGGVKGSGFENKSVLN--L 193
+T + E + D FG+ ++ +GGV VLN L
Sbjct: 100 NTPTEESI------------------KDYRDVFGDDYFSFWVGGVFF------IVLNSQL 135
Query: 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253
+F D S VP + +Q W E+ +L+ A S +V+ HIP
Sbjct: 136 FF----DPSEVPE------LAQAQDVWLEE---QLEIAKESD------CKHVIVFQHIPW 176
Query: 254 ------PEFAYFDQSNFT-GVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVN 302
E +YF N VR+ AG VKAVF+GH H N
Sbjct: 177 FLEDPDEEDSYF---NIPKSVRKP----------LLDKFKKAG-VKAVFSGHYHRN 218
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|236899 PRK11340, PRK11340, phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
FKIL +AD+H++ + SD +KPDLI+ GD +
Sbjct: 50 FKILFLADLHYSRFVPLSLI----------SDAIALGI------EQKPDLILLGGDYVL- 92
Query: 104 FDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135
FD + + +P +A P A GNHD
Sbjct: 93 FDMPLNFSAFSDVLSP-LAECAPTFACFGNHD 123
|
Length = 271 |
| >gnl|CDD|223497 COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 77 NTTAFINRMISAEKPDLIVFTGDNIFGFD----ATDAAKSLNAAFAPAIASNIPWVAVLG 132
+ + EK D ++ GD +F D + A K A + IP V + G
Sbjct: 27 KAFDELLEIAKEEKVDFVLIAGD-LF--DTNNPSPRALKLFLEALRRLKDAGIPVVVIAG 83
Query: 133 NHDQESTLSR 142
NHD S LS
Sbjct: 84 NHDSPSRLSE 93
|
Length = 390 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 100.0 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.97 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.96 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.94 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.94 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.92 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.91 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.9 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.9 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.88 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.87 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.86 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.84 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.83 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.83 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.83 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.81 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.8 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.8 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.72 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.72 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.72 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.71 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.71 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.7 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.67 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.61 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.6 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.58 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.57 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.53 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.52 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.51 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.49 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.47 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.45 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.45 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.45 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.44 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.43 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.4 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.38 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.37 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.33 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.32 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.31 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.31 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.3 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.28 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.25 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.24 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.2 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.16 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.16 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.11 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.09 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 99.04 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 99.01 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 99.0 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.95 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.94 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.94 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 98.93 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.92 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.89 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.88 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.87 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 98.79 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.74 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.66 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.65 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.64 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.63 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 98.61 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.6 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.57 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.55 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.49 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.47 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.46 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.38 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.33 | |
| PHA02239 | 235 | putative protein phosphatase | 98.32 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.32 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 98.26 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 98.25 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 98.24 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.19 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.16 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.03 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.03 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.0 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.88 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 97.81 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.76 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.72 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.69 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.67 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.6 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 97.57 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.57 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.55 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.55 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.54 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.43 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.33 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 97.15 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 97.12 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 96.83 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 96.61 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.41 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 96.31 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.26 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.2 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.88 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 95.74 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.72 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.7 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 95.54 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.51 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 95.45 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.17 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.06 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 95.01 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 94.8 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.36 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.18 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 93.36 | |
| KOG3818 | 525 | consensus DNA polymerase epsilon, subunit B [Repli | 86.37 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 81.13 | |
| PF07172 | 95 | GRP: Glycine rich protein family; InterPro: IPR010 | 80.13 |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-63 Score=436.48 Aligned_cols=332 Identities=59% Similarity=1.021 Sum_probs=298.1
Q ss_pred cCCcceeccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHH
Q 016429 31 KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAA 110 (390)
Q Consensus 31 ~~~~~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~ 110 (390)
....+++++.+|+|||+|+||+|++.+...+|.|+.|.+..+|.|.++..++.++|+.|+|||||+|||+|++....++.
T Consensus 41 ~~~~~lr~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~ 120 (379)
T KOG1432|consen 41 NGRLKLRFREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAA 120 (379)
T ss_pred CcceeeeecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHH
Confidence 33557999999999999999999999988899999999988999999999999999999999999999999998888999
Q ss_pred HHHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCcc--ccCccceeEEeccCCCCCCCCc
Q 016429 111 KSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI--IDGFGNYNLEIGGVKGSGFENK 188 (390)
Q Consensus 111 ~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~g~~~y~~~~~~~~~~~~~~~ 188 (390)
..+.++++|+++.+|||.+++||||....+++++++++...+|+++..++|.+... +.|++||.+.+.+..++.....
T Consensus 121 ~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 121 TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 99999999999999999999999999999999999999999999999998876543 5789999999998877776666
Q ss_pred ceEEEEEEeCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCC-ccc
Q 016429 189 SVLNLYFLDSGDYSTVP-SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSN-FTG 266 (390)
Q Consensus 189 ~~~~l~~lds~~~~~~~-~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-~~g 266 (390)
+...+++||++.|+..+ ...+|+||..+|++||+....+.+.. .. ...+.+.++|.|+|++++...+.++ +.|
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~-~~----~~~P~p~La~~HIP~~E~~~~~~~tp~~g 275 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEP-NS----KYNPQPGLAFFHIPLPEFLELESKTPLIG 275 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcc-cC----ccCCCCceEEEEcccHHHhhccCCCcccc
Confidence 77899999999998876 55689999999999999987542211 00 0133489999999999998888644 678
Q ss_pred ccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCC-eEEEecCCCCCCCCCCCCCCceeEEEEEecccccc
Q 016429 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG-IQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEK 345 (390)
Q Consensus 267 ~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~g-i~~~~~~~~g~~~~~~~~~~~g~rv~ei~~~~~~~ 345 (390)
.++|++.++..+++++..|.+..+|++|+|||+|.||+|..+.| +|+||+|+.||++||..+|.|++||+|++..+
T Consensus 276 ~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~--- 352 (379)
T KOG1432|consen 276 VFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARVFELDLNK--- 352 (379)
T ss_pred eeeccccccccccHHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEEEEccccc---
Confidence 99999999999999999999999999999999999999999999 99999999999999988899999999999654
Q ss_pred cCCCCcCceEEEEEccCCCCCcccceeEeec
Q 016429 346 RGWGDVKSIKTWKRLDDEHLTGVDGHVLWSK 376 (390)
Q Consensus 346 ~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~ 376 (390)
..|+||||++++...++|+|++|+.
T Consensus 353 ------~~IkTWKRl~d~~~~~~D~q~l~d~ 377 (379)
T KOG1432|consen 353 ------DRIKTWKRLDDKPLSVIDYQLLYDG 377 (379)
T ss_pred ------cccceeeecCCCCcceeeeEEEecc
Confidence 5799999999999999999999985
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-31 Score=229.14 Aligned_cols=196 Identities=51% Similarity=0.948 Sum_probs=157.2
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh-HHHHHHHHHhHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAFAPA 120 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~-~~~~~~~~l~~~ 120 (390)
++|||+||||+|++...... .....+..+.+.+.++++..+||+||++||++.+..... .+..+.++++++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l 72 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPM 72 (199)
T ss_pred CceEEEEEeeecccCCCCCC--------CcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHH
Confidence 47999999999998764321 001134567788888899999999999999766554432 567777788877
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCC
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGD 200 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~ 200 (390)
...++|+++++||||.
T Consensus 73 ~~~~~p~~~~~GNHD~---------------------------------------------------------------- 88 (199)
T cd07383 73 IDRKIPWAATFGNHDG---------------------------------------------------------------- 88 (199)
T ss_pred HHcCCCEEEECccCCC----------------------------------------------------------------
Confidence 7779999999999990
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccC--CCcccccCCCCCCCCCC
Q 016429 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ--SNFTGVRQEGISSASVN 278 (390)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~g~~~e~~~~~~~~ 278 (390)
+|++.++|++||++++.++... .....+.++|+|||+.+....|. ..+.|.+.+...+...+
T Consensus 89 ---------~g~l~~~ql~wL~~~l~~~~~~-------~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~ 152 (199)
T cd07383 89 ---------YDWIRPSQIEWFKETSAALKKK-------YGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKIN 152 (199)
T ss_pred ---------CCCCCHHHHHHHHHHHHHHhhc-------cCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCC
Confidence 3457889999999999887531 02457899999999998877775 55667777766667778
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCC
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG 325 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~ 325 (390)
.++++.+.+.++|+++||||+|.++++...+++++|+++.+|+++||
T Consensus 153 ~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l~~g~~~g~~~y~ 199 (199)
T cd07383 153 SGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199 (199)
T ss_pred cHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEEeCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999885
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=222.39 Aligned_cols=246 Identities=21% Similarity=0.264 Sum_probs=156.8
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCcCCCCChhh----HHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATD----AAKSLN 114 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~~~~~~~----~~~~~~ 114 (390)
+++|+|+++||+|++........+ ...+ ......++.+.+.+++. +||+||++||++.+..... .++.+.
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~--~~~~--~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~ 77 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGG--GDEW--DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLK 77 (262)
T ss_pred CCCEEEEEecCCccchhhccccCc--hhhh--hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence 578999999999999643211000 0000 01223445555666655 9999999999665543321 123334
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEE
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~ 194 (390)
+.++.+ ..++|+++++||||.......+.+..+... + +..+|++...+ ++++
T Consensus 78 ~~~~~~-~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~-------~---------g~~~y~~~~~~-----------~~~i 129 (262)
T cd07395 78 DVLSLL-DPDIPLVCVCGNHDVGNTPTEESIKDYRDV-------F---------GDDYFSFWVGG-----------VFFI 129 (262)
T ss_pred HHHhhc-cCCCcEEEeCCCCCCCCCCChhHHHHHHHH-------h---------CCcceEEEECC-----------EEEE
Confidence 444432 247999999999999654443333333221 1 12356666655 8999
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCC
Q 016429 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISS 274 (390)
Q Consensus 195 ~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~ 274 (390)
+|||..+... .+.+.+..+|++||+++|++.++ ...+++|+|+|||++....... ......
T Consensus 130 ~lds~~~~~~---~~~~~~~~~ql~WL~~~L~~~~~---------~~~~~~iv~~H~P~~~~~~~~~-------~~~~~~ 190 (262)
T cd07395 130 VLNSQLFFDP---SEVPELAQAQDVWLEEQLEIAKE---------SDCKHVIVFQHIPWFLEDPDEE-------DSYFNI 190 (262)
T ss_pred EeccccccCc---cccccchHHHHHHHHHHHHHHHh---------ccCCcEEEEECcCCccCCCCCC-------cccCCc
Confidence 9999754321 12456889999999999987653 2567899999999964221110 001111
Q ss_pred CCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEecc
Q 016429 275 ASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLE 341 (390)
Q Consensus 275 ~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~~ 341 (390)
...+...+..+++.++|+++||||+|.+.. ..+.|+..+.++++|+.. +. ..+|||+++|+.+
T Consensus 191 ~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~-~~~~g~~~~~~~~~~~~~-~~--~~~g~~~~~v~~~ 253 (262)
T cd07395 191 PKSVRKPLLDKFKKAGVKAVFSGHYHRNAG-GRYGGLEMVVTSAIGAQL-GN--DKSGLRIVKVTED 253 (262)
T ss_pred CHHHHHHHHHHHHhcCceEEEECccccCCc-eEECCEEEEEcCceeccc-CC--CCCCcEEEEECCC
Confidence 223456677788878899999999999665 567899888888887532 32 4689999999843
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-28 Score=221.60 Aligned_cols=242 Identities=24% Similarity=0.250 Sum_probs=151.0
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHH---HHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHH
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFI---NRMISA--EKPDLIVFTGDNIFGFDATDAAKSLN 114 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~ 114 (390)
+.++|||+||||+|+........ .+.++.+.+ .+.+++ .+||+||++||+ .+.+..+.++.+.
T Consensus 11 ~~~~~~i~~iSD~Hl~~~~~~~~-----------~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl-~~~~~~~~~~~~~ 78 (275)
T PRK11148 11 GEARVRILQITDTHLFADEHETL-----------LGVNTWESYQAVLEAIRAQQHEFDLIVATGDL-AQDHSSEAYQHFA 78 (275)
T ss_pred CCCCEEEEEEcCcccCCCCCCce-----------eccCHHHHHHHHHHHHHhhCCCCCEEEECCCC-CCCCCHHHHHHHH
Confidence 34779999999999854321110 112233334 444433 379999999995 5555555555555
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEE
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~ 194 (390)
+.++ +.++|++++|||||... .+.+.+... .+.+ .++.+. .+ .++++
T Consensus 79 ~~l~---~l~~Pv~~v~GNHD~~~-----~~~~~~~~~-----~~~~---------~~~~~~-~~----------~~~~i 125 (275)
T PRK11148 79 EGIA---PLRKPCVWLPGNHDFQP-----AMYSALQDA-----GISP---------AKHVLI-GE----------HWQIL 125 (275)
T ss_pred HHHh---hcCCcEEEeCCCCCChH-----HHHHHHhhc-----CCCc---------cceEEe-cC----------CEEEE
Confidence 5554 45799999999999832 122222110 0100 111111 11 27899
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEec-ChhhhhhccCCCcccccCCCCC
Q 016429 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHI-PLPEFAYFDQSNFTGVRQEGIS 273 (390)
Q Consensus 195 ~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~-P~~~~~~~~~~~~~g~~~e~~~ 273 (390)
+|||..+ +. ..|+++++|++||+++|++. +.++.++|+|| |++. ...+ .+..
T Consensus 126 ~Lds~~~----g~-~~G~l~~~ql~wL~~~L~~~------------~~~~~vv~~hH~P~~~-~~~~------~d~~--- 178 (275)
T PRK11148 126 LLDSQVF----GV-PHGELSEYQLEWLERKLADA------------PERHTLVLLHHHPLPA-GCAW------LDQH--- 178 (275)
T ss_pred EecCCCC----CC-cCCEeCHHHHHHHHHHHhhC------------CCCCeEEEEcCCCCCC-Ccch------hhcc---
Confidence 9999533 22 36889999999999998753 34567777776 5433 1111 0111
Q ss_pred CCCCChHHHHHHHHcC-CeeEEEeccCCCCCcccccCCeEEEecCCCCCCC------CCCCCCCceeEEEEEeccccccc
Q 016429 274 SASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA------YGKAGWERRARVVVASLEKTEKR 346 (390)
Q Consensus 274 ~~~~~~~~~~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~------~~~~~~~~g~rv~ei~~~~~~~~ 346 (390)
...|.+.+.++++.+ +|+++||||+|. .++...+|+.++.+++++++- +......+|||+++++.+.
T Consensus 179 -~l~n~~~l~~ll~~~~~v~~vl~GH~H~-~~~~~~~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~g---- 252 (275)
T PRK11148 179 -SLRNAHELAEVLAKFPNVKAILCGHIHQ-ELDLDWNGRRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHADG---- 252 (275)
T ss_pred -CCCCHHHHHHHHhcCCCceEEEecccCh-HHhceECCEEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCCC----
Confidence 124666677777775 899999999999 677788999999999887642 1112345799999996321
Q ss_pred CCCCcCceEEEEEccCCC
Q 016429 347 GWGDVKSIKTWKRLDDEH 364 (390)
Q Consensus 347 ~~~~~~~~~tw~r~~~~~ 364 (390)
...+++.|++.+.
T Consensus 253 -----~~~~~~~~~~~~~ 265 (275)
T PRK11148 253 -----SLETEVHRLADTE 265 (275)
T ss_pred -----cEEEEEEEcCCCC
Confidence 3456667877643
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-27 Score=212.33 Aligned_cols=235 Identities=23% Similarity=0.227 Sum_probs=150.9
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++||+|++.......... ......++.+.+.+++.+||+||++||++. .+..+..+.+..+.+.+.+.
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~-------~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~-~~~~~~~~~~~~~~~~l~~l 72 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYY-------RNSLEKLEEAVEEWNRESLDFVVQLGDIID-GDNARAEEALDAVLAILDRL 72 (267)
T ss_pred CeEEEEeccccccCCCcccchH-------HHhHHHHHHHHHHHHcCCCCEEEECCCeec-CCCchHHHHHHHHHHHHHhc
Confidence 7999999999876432110000 012334455555666678999999999654 43432334444444444457
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~ 203 (390)
++|++++|||||....... ... . .. ....+..+|++...+ +++++|||..++.
T Consensus 73 ~~p~~~v~GNHD~~~~~~~-~~~----~--------~~---~~~~~~~yysf~~~~-----------~~~i~lds~~~~~ 125 (267)
T cd07396 73 KGPVHHVLGNHDLYNPSRE-YLL----L--------YT---LLGLGAPYYSFSPGG-----------IRFIVLDGYDISA 125 (267)
T ss_pred CCCEEEecCccccccccHh-hhh----c--------cc---ccCCCCceEEEecCC-----------cEEEEEeCCcccc
Confidence 8999999999998654221 110 0 00 012233467777665 8899999965432
Q ss_pred CC---C----------------------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhh
Q 016429 204 VP---S----------------------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (390)
Q Consensus 204 ~~---~----------------------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (390)
.. . ....|.++++|++||+++|++... ...++|+|+|||+.....
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~----------~~~~viV~~Hhp~~~~~~ 195 (267)
T cd07396 126 LGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA----------NGEKVIIFSHFPLHPEST 195 (267)
T ss_pred ccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh----------cCCeEEEEEeccCCCCCC
Confidence 10 0 002478999999999999987643 456799999999854211
Q ss_pred ccCCCcccccCCCCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEE
Q 016429 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVV 337 (390)
Q Consensus 259 ~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~e 337 (390)
. . .....+.+.+..+++. .+|+++||||+|.+. ....+|+.++..|+++.+ ++ ..+-+.+++
T Consensus 196 -~--------~---~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~gi~~~~~~a~~~~--~~--~~~~~~~~~ 258 (267)
T cd07396 196 -S--------P---HGLLWNHEEVLSILRAYGCVKACISGHDHEGG-YAQRHGIHFLTLEGMVET--PP--ESNAFGVVI 258 (267)
T ss_pred -C--------c---cccccCHHHHHHHHHhCCCEEEEEcCCcCCCC-ccccCCeeEEEechhhcC--CC--CCCceEEEE
Confidence 0 0 1112355566677766 589999999999964 555899999999999877 32 346788888
Q ss_pred Eec
Q 016429 338 ASL 340 (390)
Q Consensus 338 i~~ 340 (390)
+..
T Consensus 259 ~~~ 261 (267)
T cd07396 259 VYE 261 (267)
T ss_pred EeC
Confidence 874
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=201.75 Aligned_cols=210 Identities=24% Similarity=0.331 Sum_probs=139.0
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
||+++||+|++......+.. ......++.+.+.+++. +||+||++||++ ..+.++.++.+.+.++.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~--------~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~-~~~~~~~~~~~~~~l~~--- 68 (240)
T cd07402 1 LLAQISDLHLRADGEGALLG--------VDTAASLEAVLAHINALHPRPDLVLVTGDLT-DDGSPESYERLRELLAA--- 68 (240)
T ss_pred CEEEEeCCccCCCCcceecC--------cCHHHHHHHHHHHHHhcCCCCCEEEECccCC-CCCCHHHHHHHHHHHhh---
Confidence 68999999999653211100 01233455566666665 999999999955 44445555555555554
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~ 202 (390)
.++|+++|+||||... ...+.+..... ..+..+|++.+.+ ++++++||....
T Consensus 69 ~~~p~~~v~GNHD~~~-----~~~~~~~~~~~------------~~~~~~~~~~~~~-----------~~~i~lds~~~~ 120 (240)
T cd07402 69 LPIPVYLLPGNHDDRA-----AMRAVFPELPP------------APGFVQYVVDLGG-----------WRLILLDSSVPG 120 (240)
T ss_pred cCCCEEEeCCCCCCHH-----HHHHhhccccc------------cccccceeEecCC-----------EEEEEEeCCCCC
Confidence 5899999999999832 11122111000 1223457776665 899999995432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHH
Q 016429 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (390)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~ 282 (390)
. ..+++.++|++||++.|++. ..+++|+++|||+......+ ... ....+...+
T Consensus 121 ~-----~~~~~~~~ql~wL~~~L~~~------------~~~~~il~~H~pp~~~~~~~------~~~----~~~~~~~~~ 173 (240)
T cd07402 121 Q-----HGGELCAAQLDWLEAALAEA------------PDKPTLVFLHHPPFPVGIAW------MDA----IGLRNAEAL 173 (240)
T ss_pred C-----cCCEECHHHHHHHHHHHHhC------------CCCCEEEEECCCCccCCchh------hhh----hhCCCHHHH
Confidence 1 35679999999999997752 45789999999985421111 000 112355666
Q ss_pred HHHHHcC-CeeEEEeccCCCCCcccccCCeEEEecCCCCCC
Q 016429 283 TTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (390)
Q Consensus 283 ~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (390)
..++..+ +++++||||+|. ......+|++++.+++.+++
T Consensus 174 ~~~l~~~~~v~~v~~GH~H~-~~~~~~~g~~~~~~gs~~~~ 213 (240)
T cd07402 174 AAVLARHPNVRAILCGHVHR-PIDGSWGGIPLLTAPSTCHQ 213 (240)
T ss_pred HHHHhcCCCeeEEEECCcCc-hHHeEECCEEEEEcCcceee
Confidence 6777766 899999999999 57777899999999988764
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=206.42 Aligned_cols=262 Identities=16% Similarity=0.118 Sum_probs=158.6
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCcCCCCChh--hHHHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDAT--DAAKSLNAAF 117 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l 117 (390)
+.++||++++|+|.+... ...+ +..+++ ..+|||||++||++++.+.. ..+..+.+.+
T Consensus 2 ~~~~~f~v~gD~~~~~~~----------------~~~~---~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~ 62 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNN----------------STNT---LDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQI 62 (294)
T ss_pred CCcEEEEEEEECCCCCCC----------------cHHH---HHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHH
Confidence 568999999999975211 1222 333333 37999999999977665543 4455666667
Q ss_pred hHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEe
Q 016429 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ld 197 (390)
+++. ..+|+++++||||.............. . ....+.......+..+|++.+.+ +++++||
T Consensus 63 ~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~Ysf~~g~-----------v~fi~Ld 124 (294)
T cd00839 63 EPLA-SYVPYMVTPGNHEADYNFSFYKIKAFF----P--RFRFPHSPSGSTSNLWYSFDVGP-----------VHFVSLS 124 (294)
T ss_pred HHHH-hcCCcEEcCcccccccCCCCccccccc----c--cccccCCCCCCCCCceEEEeeCC-----------EEEEEEe
Confidence 6653 479999999999987653321100000 0 00001100112233468888766 8999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCC
Q 016429 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (390)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~ 277 (390)
|..... .+.+..+|++||++.|++..+ ...+++|+++|+|++...... ... .....
T Consensus 125 s~~~~~------~~~~~~~q~~WL~~~L~~~~~---------~~~~~~iv~~H~P~~~~~~~~-------~~~--~~~~~ 180 (294)
T cd00839 125 TEVDFY------GDGPGSPQYDWLEADLAKVDR---------SKTPWIIVMGHRPMYCSNTDH-------DDC--IEGEK 180 (294)
T ss_pred cccccc------cCCCCcHHHHHHHHHHHHhcc---------cCCCeEEEEeccCcEecCccc-------ccc--chhHH
Confidence 954321 346889999999999987543 134579999999996532111 000 00113
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCCcccc---------------cCCeEEEecCCCCCCCCCC------CC------CC
Q 016429 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGR---------------LTGIQLCYGGGFGYHAYGK------AG------WE 330 (390)
Q Consensus 278 ~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~---------------~~gi~~~~~~~~g~~~~~~------~~------~~ 330 (390)
..+.|..|+++++|+++|+||+|....... -+|+..+..|+.|...+.. +. ..
T Consensus 181 ~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~ 260 (294)
T cd00839 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESD 260 (294)
T ss_pred HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEecc
Confidence 446678888888999999999998654332 2466555555554222110 11 23
Q ss_pred ceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEe
Q 016429 331 RRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLW 374 (390)
Q Consensus 331 ~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~ 374 (390)
.|+-++++..++ .-...|++..++. ++|+.+|.
T Consensus 261 ~g~~~~~~~~~t---------~l~~~~~~~~~g~--v~D~f~i~ 293 (294)
T cd00839 261 YGFGRLTVHNST---------HLHFEWIRNDDGV--VIDSFWII 293 (294)
T ss_pred CCEEEEEEEecC---------eEEEEEEECCCCe--EEEEEEEe
Confidence 677777775211 2345566666664 89998875
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-23 Score=199.06 Aligned_cols=263 Identities=19% Similarity=0.169 Sum_probs=157.5
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
..++||++++|+|.... . ....+.+++.+||||+++||+++.+.....+..+.+.++++
T Consensus 137 ~~~~~f~v~GDlG~~~~-----------------~----~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l 195 (427)
T PLN02533 137 KFPIKFAVSGDLGTSEW-----------------T----KSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPL 195 (427)
T ss_pred CCCeEEEEEEeCCCCcc-----------------c----HHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhH
Confidence 36799999999974321 1 12234456679999999999777655444455666666665
Q ss_pred HhCCCCEEEEeCCCCCCCCCC--HHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC
Q 016429 121 IASNIPWVAVLGNHDQESTLS--REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
. ..+|+++++||||...... ...+..+...+ ..|.......+..+|++++++ +++++|||
T Consensus 196 ~-s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf------~mP~~~~g~~~~~yYSfd~g~-----------vhfI~Lds 257 (427)
T PLN02533 196 A-SQRPWMVTHGNHELEKIPILHPEKFTAYNARW------RMPFEESGSTSNLYYSFNVYG-----------VHIIMLGS 257 (427)
T ss_pred h-hcCceEEeCccccccccccccCcCccchhhcc------cCCccccCCCCCceEEEEECC-----------EEEEEEeC
Confidence 3 5799999999999864211 00111111111 112110111233578888877 89999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
... + ....+|++||++.|++..+ ....++|+++|+|++...... .+.. +. ...
T Consensus 258 ~~~--------~-~~~~~Q~~WLe~dL~~~~r---------~~~pwiIv~~H~P~y~s~~~~----~~~~-~~----~~~ 310 (427)
T PLN02533 258 YTD--------F-EPGSEQYQWLENNLKKIDR---------KTTPWVVAVVHAPWYNSNEAH----QGEK-ES----VGM 310 (427)
T ss_pred Ccc--------c-cCchHHHHHHHHHHHhhcc---------cCCCEEEEEeCCCeeeccccc----CCcc-hh----HHH
Confidence 421 1 1467899999999987543 244679999999997632111 0000 00 011
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccc-------cCCeEEEecCCCCCC-----CC--CCCCC------CceeEEEEE
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGR-------LTGIQLCYGGGFGYH-----AY--GKAGW------ERRARVVVA 338 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~-------~~gi~~~~~~~~g~~-----~~--~~~~~------~~g~rv~ei 338 (390)
.+.|+.|+.+++|+++|+||+|.++.... ..|...+..|+.|.. .+ ..+.| .-|+-.+++
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v 390 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNV 390 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEE
Confidence 35678888888999999999998654321 134444444444421 11 11223 234445554
Q ss_pred ecccccccCCCCcCceEEEEEccCCCCCcccceeEeeccc
Q 016429 339 SLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTS 378 (390)
Q Consensus 339 ~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~~~ 378 (390)
.. . ..-..+|+|+.++...+.|+.+|.+...
T Consensus 391 ~n---~------t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 391 VD---A------NTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred Ec---C------CeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 31 1 2456788998887556789988877544
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-23 Score=179.94 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=107.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|+|+++||+|+...... + .-...++.+.+.+++.+||+||++||++........+..+.+.++.+.+.
T Consensus 1 f~~~~~~D~q~~~~~~~-------~-----~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~ 68 (214)
T cd07399 1 FTLAVLPDTQYYTESYP-------E-----VFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKA 68 (214)
T ss_pred CEEEEecCCCcCCcCCH-------H-----HHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHc
Confidence 68999999998754211 0 01123455666666789999999999554443255677777788877667
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~ 203 (390)
++|+++++||||. ++.+|+.
T Consensus 69 ~~p~~~~~GNHD~--------------------------------------------------------~~~ld~~---- 88 (214)
T cd07399 69 GIPYSVLAGNHDL--------------------------------------------------------VLALEFG---- 88 (214)
T ss_pred CCcEEEECCCCcc--------------------------------------------------------hhhCCCC----
Confidence 8999999999992 1122331
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHH
Q 016429 204 VPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFT 283 (390)
Q Consensus 204 ~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~ 283 (390)
++.+|++||+++|++. +.+++|+++|||+.... .+.... ..+ .....+.+.|.
T Consensus 89 ---------~~~~ql~WL~~~L~~~------------~~~~~iv~~H~p~~~~~-~~~~~~-~~~----~~~~~~~~~~~ 141 (214)
T cd07399 89 ---------PRDEVLQWANEVLKKH------------PDRPAILTTHAYLNCDD-SRPDSI-DYD----SDVNDGQQIWD 141 (214)
T ss_pred ---------CCHHHHHHHHHHHHHC------------CCCCEEEEecccccCCC-CcCccc-ccc----cccccHHHHHH
Confidence 3578999999998742 56789999999986421 110000 000 01112335687
Q ss_pred HHHHcC-CeeEEEeccCCCCCc
Q 016429 284 TMVAAG-DVKAVFTGHDHVNDF 304 (390)
Q Consensus 284 ~l~~~~-~v~~v~~GH~H~~~~ 304 (390)
+|++.+ +|++|||||+|....
T Consensus 142 ~ll~~~~~V~~v~~GH~H~~~~ 163 (214)
T cd07399 142 KLVKKNDNVFMVLSGHVHGAGR 163 (214)
T ss_pred HHHhCCCCEEEEEccccCCCce
Confidence 888766 899999999999543
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-22 Score=183.09 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=144.9
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh-----hHHHHHHHHHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-----DAAKSLNAAFA 118 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~-----~~~~~~~~~l~ 118 (390)
++|++++|...+... ......+.|.+.+++.+|||||++||++++.+.. ...+.+.+.+.
T Consensus 1 ~~f~~~gD~g~~~~~---------------~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~ 65 (277)
T cd07378 1 LRFLALGDWGGGGTA---------------GQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYS 65 (277)
T ss_pred CeEEEEeecCCCCCH---------------HHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHcc
Confidence 478999999865211 1234556777777778999999999987776532 11223344443
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
.+ ..++|+++++||||...+.... ..+. ..+ ..+. ...+..+|++...... ....+++++|||
T Consensus 66 ~~-~~~~P~~~v~GNHD~~~~~~~~--~~~~-~~~-----~~~~---~~~~~~~y~~~~~~~~-----~~~~~~~i~LDt 128 (277)
T cd07378 66 AP-SLQVPWYLVLGNHDYSGNVSAQ--IDYT-KRP-----NSPR---WTMPAYYYRVSFPFPS-----SDTTVEFIMIDT 128 (277)
T ss_pred ch-hhcCCeEEecCCcccCCCchhe--eehh-ccC-----CCCC---ccCcchheEEEeecCC-----CCCEEEEEEEeC
Confidence 33 2689999999999997543211 0010 000 0111 1122346777664210 012389999999
Q ss_pred CCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCC
Q 016429 199 GDYSTVPS------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (390)
Q Consensus 199 ~~~~~~~~------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~ 272 (390)
..+..... ....+.+..+|++||+++|++. ...++|+++|||+....... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~------------~~~~~iv~~H~P~~~~~~~~------~~---- 186 (277)
T cd07378 129 VPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAS------------TADWKIVVGHHPIYSSGEHG------PT---- 186 (277)
T ss_pred hhHcCccccccccccCcchhhHHHHHHHHHHHHHhc------------CCCeEEEEeCccceeCCCCC------Cc----
Confidence 76532210 1124668999999999998753 34789999999986521110 00
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccC--CeEEEecCCCCCCCCCC-------------CCCCceeEEEE
Q 016429 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT--GIQLCYGGGFGYHAYGK-------------AGWERRARVVV 337 (390)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~--gi~~~~~~~~g~~~~~~-------------~~~~~g~rv~e 337 (390)
......+..++++++|+++|+||+|.... ...+ |+..+.+|+.+...+.. .....||.+++
T Consensus 187 ---~~~~~~l~~l~~~~~v~~vl~GH~H~~~~-~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~ 262 (277)
T cd07378 187 ---SCLVDRLLPLLKKYKVDAYLSGHDHNLQH-IKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLE 262 (277)
T ss_pred ---HHHHHHHHHHHHHcCCCEEEeCCccccee-eecCCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEE
Confidence 11235677888888899999999998543 3344 78777666555321111 11246888888
Q ss_pred Eec
Q 016429 338 ASL 340 (390)
Q Consensus 338 i~~ 340 (390)
|+.
T Consensus 263 v~~ 265 (277)
T cd07378 263 LTK 265 (277)
T ss_pred Eec
Confidence 873
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=181.91 Aligned_cols=201 Identities=15% Similarity=0.156 Sum_probs=116.7
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh--------hhHHHHHHHHH
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--------TDAAKSLNAAF 117 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~--------~~~~~~~~~~l 117 (390)
|+|+||+|++...... .....+.+.+.++..+||+||++||++..... +..+..+.+.+
T Consensus 2 ~~~iSDlH~g~~~~~~-------------~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~ 68 (256)
T cd07401 2 FVHISDIHVSSFHPPN-------------RAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNIL 68 (256)
T ss_pred EEEecccccCCcCchh-------------hhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHH
Confidence 7999999999643210 00012456677888999999999996654321 11222333333
Q ss_pred hHhHh-CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEE
Q 016429 118 APAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 118 ~~~~~-~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~l 196 (390)
..... ..+|++.|+||||.....+.+...+++.++. .... .....|...... ..+++++|
T Consensus 69 ~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~---~~~~-------~~~~~~~~~~~~---------~~~~~I~L 129 (256)
T cd07401 69 KESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYS---ATGR-------DGSFSFSHTTRF---------GNYSFIGV 129 (256)
T ss_pred HHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhh---eecC-------CCccceEEEecC---------CCEEEEEE
Confidence 32211 2589999999999965433222222222210 0000 011122222101 12899999
Q ss_pred eCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCC
Q 016429 197 DSGDYSTV-PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (390)
Q Consensus 197 ds~~~~~~-~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~ 275 (390)
||..+... ......|.+.++|++||++.|++.. ..+++|+++|||+...... . .
T Consensus 130 dt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~-----------~~~~~IV~~HhP~~~~~~~-----------~---~ 184 (256)
T cd07401 130 DPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKST-----------NSNYTIWFGHYPTSTIISP-----------S---A 184 (256)
T ss_pred cCccCCCCCCCCceeccCCHHHHHHHHHHHHhcc-----------cCCeEEEEEcccchhccCC-----------C---c
Confidence 99754211 1111347899999999999887542 3467999999998431100 0 0
Q ss_pred CCChHHHHHHHHcCCeeEEEeccCCCCCc
Q 016429 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDF 304 (390)
Q Consensus 276 ~~~~~~~~~l~~~~~v~~v~~GH~H~~~~ 304 (390)
.+...+..++++++|+++||||+|.+..
T Consensus 185 -~~~~~~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 185 -KSSSKFKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred -chhHHHHHHHHhcCCcEEEeCCccCCCc
Confidence 1122266777777899999999999654
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-21 Score=178.33 Aligned_cols=222 Identities=20% Similarity=0.241 Sum_probs=129.6
Q ss_pred EEEEecccccCCC----C--CCCCCCCcc------------ccc--CC-CChhHHHHHHHHHHhc--CCCEEEEcCCcCC
Q 016429 46 ILQVADMHFANGK----T--TPCLDVLPS------------QVA--GC-SDLNTTAFINRMISAE--KPDLIVFTGDNIF 102 (390)
Q Consensus 46 i~~iSDlH~~~~~----~--~~~~~~~~~------------~~~--~~-~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~ 102 (390)
|+|+||+|++..- . ..|...... .++ .| ....+++.+.+.+++. +|||||++||++.
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~ 80 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDESGDISPPAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVR 80 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCCCCCCCCCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCC
Confidence 6899999998321 2 345443211 122 24 3455667777777766 9999999999766
Q ss_pred CCChhhHHH-----HHHHHHhHhHh--CCCCEEEEeCCCCCCCCC------CH----HHHHHHHHHcCCCccccCCCCCc
Q 016429 103 GFDATDAAK-----SLNAAFAPAIA--SNIPWVAVLGNHDQESTL------SR----EGVMKHIVTLKNTLSQVNPSDAH 165 (390)
Q Consensus 103 ~~~~~~~~~-----~~~~~l~~~~~--~~ip~~~v~GNHD~~~~~------~~----~~~~~~~~~~~~~~~~~~p~~~~ 165 (390)
........+ ....++..+.+ .++|++.++||||..... .. +.+.+....+ .+.+..
T Consensus 81 h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~-------l~~~~~ 153 (296)
T cd00842 81 HDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSW-------LPEEAE 153 (296)
T ss_pred CCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhh-------cCHHHH
Confidence 654321111 12222222222 579999999999986431 11 1222222211 111101
Q ss_pred -cccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCC
Q 016429 166 -IIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVP--GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAP 242 (390)
Q Consensus 166 -~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~~~~--~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~ 242 (390)
....-++|+..+.+ .+++++|||..+....... ..+.....|++||+++|+++++ .+
T Consensus 154 ~~~~~ggYY~~~~~~----------~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~----------~~ 213 (296)
T cd00842 154 ETFKKGGYYSVPVKP----------GLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ----------AG 213 (296)
T ss_pred HHhhcceEEEEEcCC----------CeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH----------CC
Confidence 11122556666322 2899999997654321110 1233568999999999998764 45
Q ss_pred CCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCC--eeEEEeccCCCCCccccc
Q 016429 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGD--VKAVFTGHDHVNDFCGRL 308 (390)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~--v~~v~~GH~H~~~~~~~~ 308 (390)
.+++|++|+|+....... .....+.+..|++++. |.++|+||+|..++...+
T Consensus 214 ~~v~I~~HiPp~~~~~~~--------------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~~ 267 (296)
T cd00842 214 EKVWIIGHIPPGVNSYDT--------------LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVFY 267 (296)
T ss_pred CeEEEEeccCCCCccccc--------------chHHHHHHHHHHHHHHHhhheeeecccccceEEEEe
Confidence 779999999985421000 0123455677777664 789999999997665544
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-21 Score=177.36 Aligned_cols=264 Identities=19% Similarity=0.218 Sum_probs=171.6
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh-hHHHHHHHHHh
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-DAAKSLNAAFA 118 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~-~~~~~~~~~l~ 118 (390)
++.+.+++++.|+-...+... + +.......++|+|++.||+.++.+.. ..++.+.++++
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~s-----------------~---~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vE 203 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYTS-----------------T---LRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVE 203 (452)
T ss_pred ccCceeEEEEccccccccccc-----------------h---HhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhh
Confidence 457899999999987765421 1 11111223799999999988888766 47778888888
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
++ ++.+|++++.||||.+...+. .+. ++......|..........+|++++++ +++++|+|
T Consensus 204 p~-As~vPymv~~GNHE~d~~~~~-~F~------~y~~Rf~mP~~~s~s~~~l~YSfd~G~-----------vhfv~lss 264 (452)
T KOG1378|consen 204 PI-ASYVPYMVCSGNHEIDWPPQP-CFV------PYSARFNMPGNSSESDSNLYYSFDVGG-----------VHFVVLST 264 (452)
T ss_pred hh-hccCceEEecccccccCCCcc-ccc------ccceeeccCCCcCCCCCceeEEEeecc-----------EEEEEEec
Confidence 86 478999999999999876432 000 111111223221222223579999988 89999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
..|. +. ....+|.+||++.|+++.++ +..++|++.|.|++...... ...|+. +..-
T Consensus 265 e~~~---~~----~~~~~QY~WL~~dL~~v~r~---------~tPWlIv~~HrP~Y~S~~~~------~~reG~--~~~~ 320 (452)
T KOG1378|consen 265 ETYY---NF----LKGTAQYQWLERDLASVDRK---------KTPWLIVQGHRPMYCSSNDA------HYREGE--FESM 320 (452)
T ss_pred cccc---cc----cccchHHHHHHHHHHHhccc---------CCCeEEEEecccceecCCch------hhccCc--chhh
Confidence 6443 11 14568999999999987642 36899999999998743311 111211 0011
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCC------------------eEEEecCCCC-------------CCCCCCC
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTG------------------IQLCYGGGFG-------------YHAYGKA 327 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~g------------------i~~~~~~~~g-------------~~~~~~~ 327 (390)
...|+.|+-+++|+++|.||+|.++....+.+ +.+..|.+.. ++.+..
T Consensus 321 ~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R~- 399 (452)
T KOG1378|consen 321 REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFRE- 399 (452)
T ss_pred HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccccc-
Confidence 24588999888999999999999876553211 2222222211 111221
Q ss_pred CCCceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeecc
Q 016429 328 GWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (390)
Q Consensus 328 ~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~~ 377 (390)
..-|+-++++... .....+|.|+.+++..+.|+.+|.+..
T Consensus 400 -~dfG~~~L~v~N~---------TH~~~~~~~~~d~~g~~~D~fwl~k~~ 439 (452)
T KOG1378|consen 400 -GDFGYTRLTAKNG---------THAHVHWVRNSDASGVVIDSFWLIKDY 439 (452)
T ss_pred -ccCCeEEEEEecC---------ceEEEEEEeccCCCceEeeeEEEEccc
Confidence 2357777777621 267899999988777799998888764
|
|
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-19 Score=169.01 Aligned_cols=134 Identities=14% Similarity=0.164 Sum_probs=86.9
Q ss_pred CccceeEE-eccCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEE
Q 016429 169 GFGNYNLE-IGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLV 247 (390)
Q Consensus 169 g~~~y~~~-~~~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv 247 (390)
|..+|++. ..+ +++|+|||..+ +....|.++++|++||+++|++ .+.+++||
T Consensus 290 G~~YYSFd~~gg-----------vrfIvLDSt~~----~G~~~G~L~eeQL~WLeqeLa~------------a~~k~VVV 342 (496)
T TIGR03767 290 GTGYYTFDIAGG-----------VRGISMDTTNR----AGGDEGSLGQTQFKWIKDTLRA------------SSDTLFVL 342 (496)
T ss_pred CCceEEEEeECC-----------EEEEEEeCCCc----CCCcCCccCHHHHHHHHHHHhc------------CCCCCEEE
Confidence 55678888 444 89999999632 1123688999999999999874 25578999
Q ss_pred EEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCCccccc--------CCeEEEecCC
Q 016429 248 YFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRL--------TGIQLCYGGG 318 (390)
Q Consensus 248 ~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~-~v~~v~~GH~H~~~~~~~~--------~gi~~~~~~~ 318 (390)
|+|||+......+... ........|.+.|..+++.+ +|.++||||.|.+...... .|+|-+.+++
T Consensus 343 f~HHPp~s~g~~~~Dp------~~pg~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 343 FSHHTSWSMVNELTDP------VDPGEKRHLGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred EECCCCcccccccccc------ccccccccCHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 9999985422222110 00011123554555555554 8999999999997533211 3566554432
Q ss_pred CCCCCCCCCCCCceeEEEEEeccc
Q 016429 319 FGYHAYGKAGWERRARVVVASLEK 342 (390)
Q Consensus 319 ~g~~~~~~~~~~~g~rv~ei~~~~ 342 (390)
+. +|+.-+|+|||..+.
T Consensus 417 --lv-----dfPq~~Ri~Ei~~n~ 433 (496)
T TIGR03767 417 --HI-----DFPQQGRIIELADNQ 433 (496)
T ss_pred --cc-----cCCCCceEEEEEeCC
Confidence 22 367889999998543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=159.88 Aligned_cols=214 Identities=18% Similarity=0.075 Sum_probs=119.8
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|.++||+|++....... +...+ ...+.++.+.+.++.. +||+||++||++ .....+. +...++.+.+.
T Consensus 1 ~~~~sDlHl~~~~~~~~-~~~g~-----~~~~~~~~i~~~~~~~~~~~D~viiaGDl~-~~~~~~~---~~~~l~~l~~l 70 (232)
T cd07393 1 IFAIADLHLNLDPTKPM-DVFGP-----EWKNHTEKIKENWDNVVAPEDIVLIPGDIS-WAMKLEE---AKLDLAWIDAL 70 (232)
T ss_pred CeEEEeeccCCCCCCCC-cccCc-----cHHHHHHHHHHHHHhcCCCCCEEEEcCCCc-cCCChHH---HHHHHHHHHhC
Confidence 46899999986432100 00000 1244566677776665 999999999954 3332222 22233323334
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~ 203 (390)
..|+++|+||||+.. ...+.+.+.+.+.... +. .+....+.+ +.+++++...+..
T Consensus 71 ~~~v~~V~GNHD~~~-~~~~~~~~~l~~~~~~-----------~~--~n~~~~~~~-----------i~i~G~~~~~~~~ 125 (232)
T cd07393 71 PGTKVLLKGNHDYWW-GSASKLRKALEESRLA-----------LL--FNNAYIDDD-----------VAICGTRGWDNPG 125 (232)
T ss_pred CCCeEEEeCCccccC-CCHHHHHHHHHhcCeE-----------Ee--ccCcEEECC-----------EEEEEEEeeCCCC
Confidence 568999999999843 2334444433221100 00 022222222 5666665311111
Q ss_pred CCC--------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCC
Q 016429 204 VPS--------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (390)
Q Consensus 204 ~~~--------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~ 275 (390)
.+. ....+.+.+.|+.||++.+++.... ....+.|+++|+|+... .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~--------~~~~~~i~~~H~p~~~~---~--------------- 179 (232)
T cd07393 126 NPWPPINETLKVEEDEKIFERELERLELSLKAAKKR--------EKEKIKIVMLHYPPANE---N--------------- 179 (232)
T ss_pred CccccccccccchhHHHHHHHHHHHHHHHHHHHHhC--------CCCCCEEEEECCCCcCC---C---------------
Confidence 110 0112445678999999999876532 12247999999987431 0
Q ss_pred CCChHHHHHHHHcCCeeEEEeccCCCCCcc----cccCCeEEEecCCCCC
Q 016429 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDFC----GRLTGIQLCYGGGFGY 321 (390)
Q Consensus 276 ~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~----~~~~gi~~~~~~~~g~ 321 (390)
.+...+..+++..++++++|||+|..... ...+|+.+...+++++
T Consensus 180 -~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~ 228 (232)
T cd07393 180 -GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYL 228 (232)
T ss_pred -CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhc
Confidence 12233455655568999999999985432 2468888776666654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=162.13 Aligned_cols=213 Identities=19% Similarity=0.182 Sum_probs=119.8
Q ss_pred EEEecccccCCCCCCCCCCCcccccC-CCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh---H----HHHHHHHHh
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAG-CSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD---A----AKSLNAAFA 118 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~---~----~~~~~~~l~ 118 (390)
++++|.|+-.....+.+.+.-..... ..+.-..+.+..++...+||+||++||+ ++.+... . ++.+.+++.
T Consensus 1 ~~vaDpql~~~~sy~~~~~~~~~~~~~~~D~ylr~~~~~~~~~l~PD~vv~lGDL-~d~G~~~~~~~~~~~~~rf~~i~~ 79 (257)
T cd08163 1 ALVADPQLVDDHTYPGRPWILNTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDL-FDGGRDWADEYWKKEYNRFMRIFD 79 (257)
T ss_pred CcccCCccccCCccCCCchhhhhhhHHhhHHHHHHHHHHHHHhcCCCEEEEeccc-ccCCeeCcHHHHHHHHHHHHHHhc
Confidence 35788888776443322222111111 1233333444555556799999999995 4444321 1 222333332
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCH--HHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEE
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSR--EGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~l 196 (390)
+. ...+|+++||||||....... .....+.+ ..|..+|.+.+.+ +++++|
T Consensus 80 ~~-~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~----------------~Fg~~~~~~~~~~-----------~~fV~L 131 (257)
T cd08163 80 PS-PGRKMVESLPGNHDIGFGNGVVLPVRQRFEK----------------YFGPTSRVIDVGN-----------HTFVIL 131 (257)
T ss_pred CC-CccceEEEeCCCcccCCCCCCCHHHHHHHHH----------------HhCCCceEEEECC-----------EEEEEE
Confidence 21 124799999999998643221 11222221 1122457777766 889999
Q ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCC------
Q 016429 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE------ 270 (390)
Q Consensus 197 ds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e------ 270 (390)
||..... ...+.+...|.+|+++.++.. ....++|+++|+|++..... .| |...|
T Consensus 132 ds~~l~~----~~~~~~~~~~~~~l~~~l~~~-----------~~~~p~ILl~H~Plyr~~~~---~c-g~~re~~~~~~ 192 (257)
T cd08163 132 DTISLSN----KDDPDVYQPPREFLHSFSAMK-----------VKSKPRILLTHVPLYRPPNT---SC-GPLRESKTPLP 192 (257)
T ss_pred ccccccC----CcccccchhHHHHHHhhhhcc-----------CCCCcEEEEeccccccCCCC---CC-CCccccCCCCC
Confidence 9964322 124568889999999876532 25678999999999764321 11 11011
Q ss_pred -CCCCCC---CChHHHHHHHHcCCeeEEEeccCCCCCcccccC
Q 016429 271 -GISSAS---VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLT 309 (390)
Q Consensus 271 -~~~~~~---~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~ 309 (390)
...... ...+.-..|++.-+..+||+||+|. +|...+
T Consensus 193 ~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~--~C~~~h 233 (257)
T cd08163 193 YGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHD--YCEVVH 233 (257)
T ss_pred CCCCccceeecCHHHHHHHHHhhCCcEEEecCCCc--cceeEc
Confidence 111111 1234445666666789999999995 776443
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-18 Score=160.85 Aligned_cols=252 Identities=12% Similarity=0.104 Sum_probs=144.2
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh-----hhHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA-----TDAAKSLNA 115 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~-----~~~~~~~~~ 115 (390)
++.++|+.++|.--+.. ......+.|.++.++.++||||-+||++ .++. +...+.+.+
T Consensus 24 ~~~l~F~~vGDwG~g~~----------------~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~ 86 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSK----------------QQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFEN 86 (394)
T ss_pred CCeEEEEEEecCCCCch----------------hHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhh
Confidence 67899999999984321 1234457788888889999999999976 4432 222333444
Q ss_pred HHhHhH-hCCCCEEEEeCCCCCCCCCCHHHHHHHHHH----c-----CCCc-cccCCCCCccccCccceeE--EeccCCC
Q 016429 116 AFAPAI-ASNIPWVAVLGNHDQESTLSREGVMKHIVT----L-----KNTL-SQVNPSDAHIIDGFGNYNL--EIGGVKG 182 (390)
Q Consensus 116 ~l~~~~-~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~----~-----~~~~-~~~~p~~~~~~~g~~~y~~--~~~~~~~ 182 (390)
+..... .+++||+.|+||||+..+... ++...... . .+.. ....| ++.....+|.+ .+....+
T Consensus 87 vY~~~s~~L~~Pwy~vLGNHDy~Gn~~A-Qi~r~~~~y~~~~~~~~~~y~~~~~~~~---RW~mP~~yY~~~~~f~~~~~ 162 (394)
T PTZ00422 87 VYSEESGDMQIPFFTVLGQADWDGNYNA-ELLKGQNVYLNGHGQTDIEYDSNNDIYP---KWIMPNYWYHYFTHFTDTSG 162 (394)
T ss_pred hccCcchhhCCCeEEeCCcccccCCchh-hhccccccccccccccccccccccccCC---CccCCchhheeeeeeecccc
Confidence 443321 267999999999998655432 22211000 0 0000 00111 12222123432 1110000
Q ss_pred CC---C-CCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhh
Q 016429 183 SG---F-ENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (390)
Q Consensus 183 ~~---~-~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (390)
.. . .....+.++++||...+... .+....+.+++||+++|+... ....++||+.|||++....
T Consensus 163 ~~~~~~~~~~~~v~fifiDT~~l~~~~---~~~~~~~~~w~~L~~~L~~a~----------k~a~WkIVvGHhPIySsG~ 229 (394)
T PTZ00422 163 PSLLKSGHKDMSVAFIFIDTWILSSSF---PYKKVSERAWQDLKATLEYAP----------KIADYIIVVGDKPIYSSGS 229 (394)
T ss_pred cccccccCCCCEEEEEEEECchhcccC---CccccCHHHHHHHHHHHHhhc----------cCCCeEEEEecCceeecCC
Confidence 00 0 01234789999996443210 123357789999999986432 2567999999999976321
Q ss_pred ccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCC----C-----CC
Q 016429 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK----A-----GW 329 (390)
Q Consensus 259 ~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~----~-----~~ 329 (390)
.. ... .=...+..|+++++|+++++||+|..+.. ..+|+..+.+|+.|...++. + ..
T Consensus 230 hg------~~~-------~L~~~L~PLL~ky~VdlYisGHDH~lq~i-~~~gt~yIvSGaGs~~~~~~~~~~~~s~F~~~ 295 (394)
T PTZ00422 230 SK------GDS-------YLSYYLLPLLKDAQVDLYISGYDRNMEVL-TDEGTAHINCGSGGNSGRKSIMKNSKSLFYSE 295 (394)
T ss_pred CC------CCH-------HHHHHHHHHHHHcCcCEEEEccccceEEe-cCCCceEEEeCccccccCCCCCCCCCcceecC
Confidence 10 000 00136788899999999999999985543 35688877776654322211 0 12
Q ss_pred CceeEEEEEec
Q 016429 330 ERRARVVVASL 340 (390)
Q Consensus 330 ~~g~rv~ei~~ 340 (390)
..|+-.++++.
T Consensus 296 ~~GF~~~~l~~ 306 (394)
T PTZ00422 296 DIGFCIHELNA 306 (394)
T ss_pred CCCEEEEEEec
Confidence 36777777764
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=160.95 Aligned_cols=213 Identities=14% Similarity=0.035 Sum_probs=114.6
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASN 124 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ 124 (390)
||+++||+|++.... .....++.+.+.+++.++|+||++||++ +.. +.....+ +.+.++ .+
T Consensus 1 ki~~iSDlH~~~~~~--------------~~~~~l~~~~~~~~~~~~d~vv~~GDl~-~~~-~~~~~~~-~~l~~~--~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHF--------------DTEEMLETLAQYLKKQKIDHLHIAGDIS-NDF-QRSLPFI-EKLQEL--KG 61 (239)
T ss_pred CEEEEEeecCCCCCC--------------CHHHHHHHHHHHHHhcCCCEEEECCccc-cch-hhHHHHH-HHHHHh--cC
Confidence 689999999852211 1123456667777778999999999954 432 2222222 222221 56
Q ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC-CCC--
Q 016429 125 IPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS-GDY-- 201 (390)
Q Consensus 125 ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds-~~~-- 201 (390)
+|+++++||||+......+++.+.. . .. .-......+. .++ +++++++- .+|
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~~~-~-~~----~l~~~~~~~~-~~~------------------~~~ig~~gw~d~~~ 116 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIESND-S-PL----YLHNRFIDIP-NTQ------------------WRIIGNNGWYDYSF 116 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHhcc-c-hh----hhcccccccC-CCc------------------eEEEeeccceeccc
Confidence 8999999999986444433332211 0 00 0000000000 000 23333331 000
Q ss_pred -------------------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCC
Q 016429 202 -------------------STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQS 262 (390)
Q Consensus 202 -------------------~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 262 (390)
+........+.+.++|++||++.|++. ...++|+++|||+.......
T Consensus 117 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~------------~~~~~ivvtH~pP~~~~~~~-- 182 (239)
T TIGR03729 117 SNDKTSKEILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQL------------DNKQVIFVTHFVPHRDFIYV-- 182 (239)
T ss_pred ccccCHHHHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhc------------CCCCEEEEEcccchHHHhcC--
Confidence 000010123557889999999988643 45689999999764311100
Q ss_pred CcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEec
Q 016429 263 NFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 263 ~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (390)
. .+...........++..+..+++.+++++++|||+|........+|++++..
T Consensus 183 ~-~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~ 235 (239)
T TIGR03729 183 P-MDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGPLTIGGTTYHNR 235 (239)
T ss_pred C-CCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCCCCEEECCEEEEec
Confidence 0 0000000001234666678888777999999999999432344588887654
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=158.39 Aligned_cols=202 Identities=23% Similarity=0.290 Sum_probs=123.4
Q ss_pred eEEEEEecccccC-CCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFAN-GKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
|||+||||+|++. .. .....+..+.+.++..+||+||++|| ++..+....++.+.+.++ ...
T Consensus 1 ~~i~~isD~H~~~~~~---------------~~~~~~~~~~~~i~~~~~D~~v~tGD-l~~~~~~~~~~~~~~~l~-~~~ 63 (301)
T COG1409 1 MRIAHISDLHLGALGV---------------DSEELLEALLAAIEQLKPDLLVVTGD-LTNDGEPEEYRRLKELLA-RLE 63 (301)
T ss_pred CeEEEEecCccccccc---------------chHHHHHHHHHHHhcCCCCEEEEccC-cCCCCCHHHHHHHHHHHh-hcc
Confidence 6899999999995 21 12345566666777789999999999 777777788888877777 234
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~ 202 (390)
...|++++|||||......... .+.. .... .+...... .+.++++.+||....
T Consensus 64 ~~~~~~~vpGNHD~~~~~~~~~-~~~~----------~~~~--------~~~~~~~~--------~~~~~~~~~d~~~~~ 116 (301)
T COG1409 64 LPAPVIVVPGNHDARVVNGEAF-SDQF----------FNRY--------AVLVGACS--------SGGWRVIGLDSSVPG 116 (301)
T ss_pred CCCceEeeCCCCcCCchHHHHh-hhhh----------cccC--------cceEeecc--------CCceEEEEecCCCCC
Confidence 6889999999999865432211 1100 0000 01111100 012789999996432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHH
Q 016429 203 TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (390)
Q Consensus 203 ~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~ 282 (390)
. ..|.++..|++|+++.+++... ......+++.|||++..... ..... ..+...+
T Consensus 117 ~-----~~G~~~~~q~~~l~~~l~~~~~---------~~~~~~v~~~hh~~~~~~~~-------~~~~~----l~~~~~~ 171 (301)
T COG1409 117 V-----PLGRLGAEQLDWLEEALAAAPE---------RAKDTVVVLHHHPLPSPGTG-------VDRVA----LRDAGEL 171 (301)
T ss_pred C-----CCCEECHHHHHHHHHHHHhCcc---------ccCceEEEecCCCCCCCCCc-------cceee----eecchhH
Confidence 1 3577999999999999876431 00124566666666432111 11111 1233334
Q ss_pred HHHHHcC-C-eeEEEeccCCCCC-cccccCCeEEE
Q 016429 283 TTMVAAG-D-VKAVFTGHDHVND-FCGRLTGIQLC 314 (390)
Q Consensus 283 ~~l~~~~-~-v~~v~~GH~H~~~-~~~~~~gi~~~ 314 (390)
..++... + |++|++||.|... ......+..+.
T Consensus 172 ~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~~ 206 (301)
T COG1409 172 LDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRLS 206 (301)
T ss_pred HHHHHhcCCceEEEEeCcccccccccceeCCeeee
Confidence 4444444 4 9999999999942 55555665544
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=148.27 Aligned_cols=185 Identities=16% Similarity=0.195 Sum_probs=108.6
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCC
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNI 125 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~i 125 (390)
|+++||+|.... .+.. ..+++.+||+||++|| ++..+....+..+ +.+ .+.++
T Consensus 1 i~~~sD~H~~~~--------------------~~~~--~~~~~~~~D~vv~~GD-l~~~~~~~~~~~~-~~l---~~~~~ 53 (188)
T cd07392 1 ILAISDIHGDVE--------------------KLEA--IILKAEEADAVIVAGD-ITNFGGKEAAVEI-NLL---LAIGV 53 (188)
T ss_pred CEEEEecCCCHH--------------------HHHH--HHhhccCCCEEEECCC-ccCcCCHHHHHHH-HHH---HhcCC
Confidence 689999996531 1121 4456789999999999 5555544433333 333 34689
Q ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCC
Q 016429 126 PWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP 205 (390)
Q Consensus 126 p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~ 205 (390)
|+++|+||||... ..+.+. +.. .... +....+.+ +.++++++.....
T Consensus 54 p~~~v~GNHD~~~------~~~~~~----------~~~-~~~~---~~~~~~~~-----------~~~~g~~~~~~~~-- 100 (188)
T cd07392 54 PVLAVPGNCDTPE------ILGLLT----------SAG-LNLH---GKVVEVGG-----------YTFVGIGGSNPTP-- 100 (188)
T ss_pred CEEEEcCCCCCHH------HHHhhh----------cCc-EecC---CCEEEECC-----------EEEEEeCCCCCCC--
Confidence 9999999999722 111110 000 0011 12223333 7889998742111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHH
Q 016429 206 SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTM 285 (390)
Q Consensus 206 ~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l 285 (390)
. ...+.++++|++|+ +.+ .. ...++.|+++|+|+... +.+... .....++..+..+
T Consensus 101 ~-~~~~~~~~~~l~~~-~~l---~~---------~~~~~~ilv~H~pp~~~---~~d~~~-------~~~~~g~~~l~~l 156 (188)
T cd07392 101 F-NTPIELSEEEIVSD-GRL---NN---------LLAKNLILVTHAPPYGT---AVDRVS-------GGFHVGSKAIRKF 156 (188)
T ss_pred C-CCccccCHHHHHHh-hhh---hc---------cCCCCeEEEECCCCcCC---cccccC-------CCCccCCHHHHHH
Confidence 1 12456788999998 222 21 25678999999988431 100000 0012356778888
Q ss_pred HHcCCeeEEEeccCCCCCcccccCCeEEE
Q 016429 286 VAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314 (390)
Q Consensus 286 ~~~~~v~~v~~GH~H~~~~~~~~~gi~~~ 314 (390)
++..++++++|||+|.......+++.+++
T Consensus 157 i~~~~~~~~l~GH~H~~~~~~~~~~~~~~ 185 (188)
T cd07392 157 IEERQPLLCICGHIHESRGVDKIGNTLVV 185 (188)
T ss_pred HHHhCCcEEEEeccccccceeeeCCeEEe
Confidence 88778999999999994323345555444
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-18 Score=147.49 Aligned_cols=219 Identities=19% Similarity=0.255 Sum_probs=125.1
Q ss_pred ccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh-----hHHHH
Q 016429 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-----DAAKS 112 (390)
Q Consensus 38 ~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~-----~~~~~ 112 (390)
.++++.++|+++.|+..... + ........+.+.-++...|||+-+||.++..+-. ...+.
T Consensus 38 ~~~dgslsflvvGDwGr~g~----~-----------nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~s 102 (336)
T KOG2679|consen 38 AKSDGSLSFLVVGDWGRRGS----F-----------NQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDS 102 (336)
T ss_pred CCCCCceEEEEEcccccCCc----h-----------hHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhh
Confidence 34679999999999983221 1 1112223444555668999999999999888642 22333
Q ss_pred HHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeE----EeccCCCCCCCCc
Q 016429 113 LNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNL----EIGGVKGSGFENK 188 (390)
Q Consensus 113 ~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~----~~~~~~~~~~~~~ 188 (390)
+.++... -.++.|||.|.||||+..+... ++...+.+... ..+-|. ..|.. +....+
T Consensus 103 F~nIYT~-pSLQkpWy~vlGNHDyrGnV~A-Qls~~l~~~d~--RW~c~r--------sf~~~ae~ve~f~v~------- 163 (336)
T KOG2679|consen 103 FENIYTA-PSLQKPWYSVLGNHDYRGNVEA-QLSPVLRKIDK--RWICPR--------SFYVDAEIVEMFFVD------- 163 (336)
T ss_pred hhhcccC-cccccchhhhccCccccCchhh-hhhHHHHhhcc--ceeccc--------HHhhcceeeeeeccc-------
Confidence 3333321 1367799999999999877653 33333333221 111121 11111 000000
Q ss_pred ceEEEEEEeCCCCCCCCCCCCCCC--------CCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhcc
Q 016429 189 SVLNLYFLDSGDYSTVPSVPGYGW--------IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFD 260 (390)
Q Consensus 189 ~~~~l~~lds~~~~~~~~~~~~g~--------i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~ 260 (390)
...+++|+-. . +....++| +-..++.||+..|++. ..++.||..|||+.......
T Consensus 164 --~~~f~~d~~~--~-~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S------------~a~wkiVvGHh~i~S~~~HG 226 (336)
T KOG2679|consen 164 --TTPFMDDTFT--L-CTDDVYDWRGVLPRVKYLRALLSWLEVALKAS------------RAKWKIVVGHHPIKSAGHHG 226 (336)
T ss_pred --cccchhhhee--c-ccccccccccCChHHHHHHHHHHHHHHHHHHh------------hcceEEEecccceehhhccC
Confidence 1122222210 0 11112222 3456788998887753 56799999999995521111
Q ss_pred CCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccc-cCCeEEEecCCCC
Q 016429 261 QSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR-LTGIQLCYGGGFG 320 (390)
Q Consensus 261 ~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~-~~gi~~~~~~~~g 320 (390)
.-.+ =.+.+..|+++++|+++++||+|.-+.... .++|.++.+|+.+
T Consensus 227 ------~T~e-------L~~~LlPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagS 274 (336)
T KOG2679|consen 227 ------PTKE-------LEKQLLPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGS 274 (336)
T ss_pred ------ChHH-------HHHHHHHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcc
Confidence 0000 014567778888999999999998654444 5788888776654
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-15 Score=131.10 Aligned_cols=196 Identities=14% Similarity=0.115 Sum_probs=112.1
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC-hhhHHHHHHHHHhHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPA 120 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~-~~~~~~~~~~~l~~~ 120 (390)
..+||+.+||+|- +...++.+.+.+++.++|+||++|| +++.+ ..+.+. .+++.+
T Consensus 3 ~~~kIl~iSDiHg--------------------n~~~le~l~~~~~~~~~D~vv~~GD-l~~~g~~~~~~~---~~l~~l 58 (224)
T cd07388 3 TVRYVLATSNPKG--------------------DLEALEKLVGLAPETGADAIVLIGN-LLPKAAKSEDYA---AFFRIL 58 (224)
T ss_pred ceeEEEEEEecCC--------------------CHHHHHHHHHHHhhcCCCEEEECCC-CCCCCCCHHHHH---HHHHHH
Confidence 3579999999992 2334566666666679999999999 55554 334333 333334
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHH-HcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCC
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVMKHIV-TLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~ 199 (390)
.+.+.|+++|+||||.. +.+.+. .+.. ....|.. ..+.+ .+. .+.+ .++++.++..
T Consensus 59 ~~l~~pv~~V~GNhD~~-------v~~~l~~~~~~--~~~~p~~-~~lh~--~~~-~~~g----------~~~~~GlGGs 115 (224)
T cd07388 59 GEAHLPTFYVPGPQDAP-------LWEYLREAYNA--ELVHPEI-RNVHE--TFA-FWRG----------PYLVAGVGGE 115 (224)
T ss_pred HhcCCceEEEcCCCChH-------HHHHHHHHhcc--cccCccc-eecCC--CeE-EecC----------CeEEEEecCC
Confidence 34678999999999962 111111 1100 0000111 11222 111 1111 1578888853
Q ss_pred CCCCCCCCCCCCCCCHHHH----HHH-HHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCC
Q 016429 200 DYSTVPSVPGYGWIKPSQQ----FWF-EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISS 274 (390)
Q Consensus 200 ~~~~~~~~~~~g~i~~~q~----~Wl-~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~ 274 (390)
.-. + ...+++|+ .|+ +..++.+.+ ....+.|+++|+|++... .
T Consensus 116 ~~~--~-----~e~sE~e~~~~~~~~~~~~l~~~~~---------~~~~~~VLv~H~PP~g~g---------~------- 163 (224)
T cd07388 116 IAD--E-----GEPEEHEALRYPAWVAEYRLKALWE---------LKDYRKVFLFHTPPYHKG---------L------- 163 (224)
T ss_pred cCC--C-----CCcCHHHHhhhhhhHHHHHHHHHHh---------CCCCCeEEEECCCCCCCC---------C-------
Confidence 211 1 22466663 675 333333332 145689999999995521 0
Q ss_pred CCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCC
Q 016429 275 ASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGF 319 (390)
Q Consensus 275 ~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~ 319 (390)
...++..+..+++..+.++++|||+|. .. -..++ +++.++++
T Consensus 164 ~h~GS~alr~~I~~~~P~l~i~GHih~-~~-~~~g~-t~vvNpg~ 205 (224)
T cd07388 164 NEQGSHEVAHLIKTHNPLVVLVGGKGQ-KH-ELLGA-SWVVVPGD 205 (224)
T ss_pred CccCHHHHHHHHHHhCCCEEEEcCCce-eE-EEeCC-EEEECCCc
Confidence 124678889999998899999999994 22 22333 44555444
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-17 Score=133.43 Aligned_cols=80 Identities=29% Similarity=0.368 Sum_probs=54.9
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCC
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNI 125 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~i 125 (390)
|+|+||+|++........ .....++.+.+.++..+||+|+++|| +.+.+....+..+.+.++.+....+
T Consensus 1 il~isD~Hl~~~~~~~~~----------~~~~~l~~~~~~~~~~~~d~vi~~GD-l~~~~~~~~~~~~~~~~~~l~~~~~ 69 (144)
T cd07400 1 ILHLSDLHFGPERKPELL----------ALLSLLDRLLAEIKALDPDLVVITGD-LTQRGLPEEFEEAREFLDALPAPLE 69 (144)
T ss_pred CeEeCccCCCCCcchhHH----------HHHHHHHHHHHHHhccCCCEEEECCC-CCCCCCHHHHHHHHHHHHHccccCC
Confidence 689999999875432100 01111344666777789999999999 5555555556667777776644446
Q ss_pred CEEEEeCCCCC
Q 016429 126 PWVAVLGNHDQ 136 (390)
Q Consensus 126 p~~~v~GNHD~ 136 (390)
|+++++||||.
T Consensus 70 ~~~~v~GNHD~ 80 (144)
T cd07400 70 PVLVVPGNHDV 80 (144)
T ss_pred cEEEeCCCCeE
Confidence 99999999995
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-15 Score=142.71 Aligned_cols=129 Identities=17% Similarity=0.151 Sum_probs=72.4
Q ss_pred EEEEEEeCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCC-eEEEEecChhhhhhccCCCccc
Q 016429 191 LNLYFLDSGDYSTV---PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAP-GLVYFHIPLPEFAYFDQSNFTG 266 (390)
Q Consensus 191 ~~l~~lds~~~~~~---~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~-~iv~~H~P~~~~~~~~~~~~~g 266 (390)
+++|+|||..+... ++ ...|.++++|++||+++|++.. ...+ +|++.|+|+....... +..
T Consensus 305 lrvIvLDSt~~~~~~s~pG-~~~G~Ld~eQLaWLe~~La~a~-----------a~~p~VVV~hHpPi~t~gi~~---md~ 369 (492)
T TIGR03768 305 LKVIVLDDTQSEHDGSHDI-HGHGSLDAKRWDWLKAELARGQ-----------ADGQLMIIAAHIPIAVSPIGS---EME 369 (492)
T ss_pred eEEEEECCCccccccCCCC-CcceeeCHHHHHHHHHHHHhCc-----------CCCceEEEEeCCCcccCCccc---hhh
Confidence 59999999754422 12 2368899999999999988642 2335 5555555664311100 000
Q ss_pred cc--CCCCCCCCCCh---HHHHHHHH-cCCeeEEEeccCCCCCccccc---------CCeEEEecCCCCCCCCCCCCCCc
Q 016429 267 VR--QEGISSASVNS---GFFTTMVA-AGDVKAVFTGHDHVNDFCGRL---------TGIQLCYGGGFGYHAYGKAGWER 331 (390)
Q Consensus 267 ~~--~e~~~~~~~~~---~~~~~l~~-~~~v~~v~~GH~H~~~~~~~~---------~gi~~~~~~~~g~~~~~~~~~~~ 331 (390)
.+ .-....+..+. ..+..+++ +++|.++||||.|.+ ....+ .|.|-+-..+ ..+|+.
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn-~v~a~~~p~~~~pe~gFWeveTaS-------l~DfPQ 441 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN-TVKAFPSPDPARPEYGFWQVETAS-------LRDFPQ 441 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc-cccccCCCCCCCCcCceEEEeehh-------hccchh
Confidence 00 00000011122 24455554 458999999999985 22211 3455443322 134788
Q ss_pred eeEEEEEeccc
Q 016429 332 RARVVVASLEK 342 (390)
Q Consensus 332 g~rv~ei~~~~ 342 (390)
-+|+|||..+.
T Consensus 442 q~R~~Ei~~n~ 452 (492)
T TIGR03768 442 QFRTFEIYLNS 452 (492)
T ss_pred hceEEEEEeCC
Confidence 99999998543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.5e-18 Score=142.71 Aligned_cols=79 Identities=27% Similarity=0.412 Sum_probs=52.2
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++||+|++.... .. ....+.......++|+||++||++......................
T Consensus 1 ~ri~~isD~H~~~~~~---------------~~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 64 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD---------------SD-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNP 64 (200)
T ss_dssp EEEEEEEBBTTTHHHH---------------CH-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEcCCCCCCcch---------------hH-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhc
Confidence 7999999999875321 01 2355566666789999999999665554433222221123334457
Q ss_pred CCCEEEEeCCCCCCC
Q 016429 124 NIPWVAVLGNHDQES 138 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~ 138 (390)
.+|+++++||||...
T Consensus 65 ~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 65 KIPVYFILGNHDYYS 79 (200)
T ss_dssp TTTEEEEE-TTSSHH
T ss_pred cccccccccccccce
Confidence 999999999999954
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.7e-17 Score=142.71 Aligned_cols=90 Identities=23% Similarity=0.299 Sum_probs=58.6
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC-hhhHHHHHHHHHhHhHhC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~-~~~~~~~~~~~l~~~~~~ 123 (390)
||+|+||+|++......... .+ ......+++.+.+.+.+.+||+||++||++.... .......+.+.+..+...
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRD---RR--REDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEA 75 (223)
T ss_pred CeEEeccccCCccccCcCcc---cc--hHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHC
Confidence 68999999999654321100 00 0012344566666667789999999999555432 223344556666665446
Q ss_pred CCCEEEEeCCCCCCCC
Q 016429 124 NIPWVAVLGNHDQEST 139 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~ 139 (390)
++|+++++||||....
T Consensus 76 ~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 76 GIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCEEEecCCCCCccc
Confidence 8999999999998654
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-15 Score=135.50 Aligned_cols=80 Identities=28% Similarity=0.362 Sum_probs=54.7
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
..|||+++||+|++... ....++.+.+.+++++||+|+++||++.... ....+.+.+.++.+.
T Consensus 48 ~~~rI~~lSDlH~~~~~----------------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~-~~~~~~~~~~L~~L~ 110 (271)
T PRK11340 48 APFKILFLADLHYSRFV----------------PLSLISDAIALGIEQKPDLILLGGDYVLFDM-PLNFSAFSDVLSPLA 110 (271)
T ss_pred CCcEEEEEcccCCCCcC----------------CHHHHHHHHHHHHhcCCCEEEEccCcCCCCc-cccHHHHHHHHHHHh
Confidence 46999999999986421 1223455667777899999999999654221 222234445565553
Q ss_pred hCCCCEEEEeCCCCCCCC
Q 016429 122 ASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~ 139 (390)
...|+++|+||||+...
T Consensus 111 -~~~pv~~V~GNHD~~~~ 127 (271)
T PRK11340 111 -ECAPTFACFGNHDRPVG 127 (271)
T ss_pred -hcCCEEEecCCCCcccC
Confidence 35799999999998643
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=134.44 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=41.3
Q ss_pred CCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecC
Q 016429 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGG 317 (390)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~ 317 (390)
+++|+++|||+......+. ....... ......+..+++.++|++++|||+|.+ .....+|+.++.++
T Consensus 97 ~~~vv~~HhpP~~~~~~~~------~~~~~~~-~~~~~~l~~~~~~~~v~~~i~GH~H~~-~~~~~~g~~~~~np 163 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQ------YGDSLVN-AAFAVDLDDLILADPIDLWIHGHTHFN-FDYRIGGTRVLSNQ 163 (166)
T ss_pred CCEEEEeCCCCCccccCcc------ccCCCcc-hhhhhccHhHHhhcCCCEEEECCcccc-ceEEECCEEEEecC
Confidence 6899999998854221110 0001000 011233566667788999999999995 55667888866554
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.6e-14 Score=133.12 Aligned_cols=89 Identities=24% Similarity=0.359 Sum_probs=57.1
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh--HHHHHHHHHhH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFAP 119 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~--~~~~~~~~l~~ 119 (390)
+.|||+|+||+|+|.......+. -....+++.+.+.+.++++|+||++|| +++...+. ....+.+.+..
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~--------~D~~~~f~eil~~a~~~~vD~VLiaGD-LFd~~~Ps~~~~~~~~~~lr~ 72 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRG--------DDSWNTFEEVLQIAKEQDVDMILLGGD-LFHENKPSRKSLYQVLRSLRL 72 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhh--------hhHHHHHHHHHHHHHHcCCCEEEECCc-cCCCCCCCHHHHHHHHHHHHH
Confidence 57999999999998643221110 011235566666777889999999999 66665443 22222233332
Q ss_pred h---------------------------------HhCCCCEEEEeCCCCCCCC
Q 016429 120 A---------------------------------IASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 120 ~---------------------------------~~~~ip~~~v~GNHD~~~~ 139 (390)
. ...++|+++|.||||....
T Consensus 73 ~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~ 125 (405)
T TIGR00583 73 YCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSG 125 (405)
T ss_pred hhccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCccc
Confidence 0 0147999999999998654
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=128.58 Aligned_cols=80 Identities=29% Similarity=0.299 Sum_probs=55.6
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
.|||+++||+|++... ....++.+.+.+++++||+|+++||++..... .. ..+.+.++.+ .
T Consensus 1 ~~~i~~~sDlH~~~~~----------------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~-~~-~~~~~~l~~l-~ 61 (223)
T cd07385 1 GLRIAHLSDLHLGPFV----------------SRERLERLVEKINALKPDLVVLTGDLVDGSVD-VL-ELLLELLKKL-K 61 (223)
T ss_pred CCEEEEEeecCCCccC----------------CHHHHHHHHHHHhccCCCEEEEcCcccCCcch-hh-HHHHHHHhcc-C
Confidence 4899999999987542 12244666777777899999999995554432 21 3344455543 3
Q ss_pred CCCCEEEEeCCCCCCCCCC
Q 016429 123 SNIPWVAVLGNHDQESTLS 141 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~ 141 (390)
..+|+++++||||+.....
T Consensus 62 ~~~~v~~v~GNHD~~~~~~ 80 (223)
T cd07385 62 APLGVYAVLGNHDYYSGDE 80 (223)
T ss_pred CCCCEEEECCCcccccCch
Confidence 5689999999999866543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=131.74 Aligned_cols=86 Identities=19% Similarity=0.291 Sum_probs=58.2
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhH--HHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA--AKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~--~~~~~~~l~~~~ 121 (390)
|||+|+||+|+|....+... .. .....++.+.+.+.+++||+||++|| +++...+.. ...+.+++..+.
T Consensus 1 mkilh~SDlHlG~~~~~~~~--~~------~~~~~l~~l~~~i~~~~~D~viIaGD-ifD~~~p~~~a~~~~~~~l~~L~ 71 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSR--AA------EHQAFLDWLLEQVQEHQVDAIIVAGD-IFDTGSPPSYARELYNRFVVNLQ 71 (407)
T ss_pred CEEEEEcccCCCCcccCccc--HH------HHHHHHHHHHHHHHhcCCCEEEECCc-cccCCCCcHHHHHHHHHHHHHHH
Confidence 79999999999854221100 00 01234566777788899999999999 565543322 233455666666
Q ss_pred hCCCCEEEEeCCCCCCC
Q 016429 122 ASNIPWVAVLGNHDQES 138 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~ 138 (390)
+.++|+++|+||||...
T Consensus 72 ~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 72 QTGCQLVVLAGNHDSVA 88 (407)
T ss_pred hcCCcEEEEcCCCCChh
Confidence 67899999999999854
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-13 Score=130.36 Aligned_cols=294 Identities=19% Similarity=0.178 Sum_probs=157.2
Q ss_pred eccCCCCeEEEEEecccccCC----CCCCCCC--------CCc-------cccc---CC-CChhHHHHHHHHHHh-c-CC
Q 016429 37 RFRQNGEFKILQVADMHFANG----KTTPCLD--------VLP-------SQVA---GC-SDLNTTAFINRMISA-E-KP 91 (390)
Q Consensus 37 ~~~~~~~~ki~~iSDlH~~~~----~~~~~~~--------~~~-------~~~~---~~-~~~~~~~~l~~~i~~-~-~p 91 (390)
+...+..+||+|++|+|.+.. ....|.. ..| .-|+ .| ....+++.+.+.|++ . ++
T Consensus 132 p~~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~i 211 (577)
T KOG3770|consen 132 PLKNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDI 211 (577)
T ss_pred CCCCCCceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 333346699999999999721 1111111 011 1122 33 344555666666654 3 38
Q ss_pred CEEEEcCCcCCCCChhh----HHHHHHHHHhHhHh--CCCCEEEEeCCCCCCCC-------CCH----HHHHH-HHHHcC
Q 016429 92 DLIVFTGDNIFGFDATD----AAKSLNAAFAPAIA--SNIPWVAVLGNHDQEST-------LSR----EGVMK-HIVTLK 153 (390)
Q Consensus 92 D~Vv~~GD~i~~~~~~~----~~~~~~~~l~~~~~--~~ip~~~v~GNHD~~~~-------~~~----~~~~~-~~~~~~ 153 (390)
|+|++|||++.....+. ..+.+.+..+.+.+ .++|+|...||||.... .+. ..+.+ +...+.
T Consensus 212 D~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W~ 291 (577)
T KOG3770|consen 212 DYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAWS 291 (577)
T ss_pred CEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhhh
Confidence 99999999776663321 12222222222222 58999999999998531 111 11111 112221
Q ss_pred CCccccCCCCCccccCc-cceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHh
Q 016429 154 NTLSQVNPSDAHIIDGF-GNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP-SVPGYGWIKPSQQFWFEQTSARLQRA 231 (390)
Q Consensus 154 ~~~~~~~p~~~~~~~g~-~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~-~~~~~g~i~~~q~~Wl~~~l~~l~~~ 231 (390)
.+-|.+....... +.|...+.+ +++++.||+..-.... .......-..+|++||..+|.+++.
T Consensus 292 ----~wlp~e~~~t~~kga~Y~~~~~~----------Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~- 356 (577)
T KOG3770|consen 292 ----TWLPAEAKETFLKGAYYLVLVID----------GLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES- 356 (577)
T ss_pred ----ccCCHHHHhhhhcCcEEEEeecC----------CceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh-
Confidence 1223322222222 344444332 2889999996432211 1111222355689999999998764
Q ss_pred hcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcC--CeeEEEeccCCCCCcccccC
Q 016429 232 YMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG--DVKAVFTGHDHVNDFCGRLT 309 (390)
Q Consensus 232 ~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~--~v~~v~~GH~H~~~~~~~~~ 309 (390)
.+..+-++.|+|+... ...++. +.-+-.++.+. -+...|.||+|.+.+...++
T Consensus 357 ---------~GekVhil~HIPpG~~----------~c~~~w------s~~f~~iv~r~~~tI~gqf~GH~h~d~f~v~yd 411 (577)
T KOG3770|consen 357 ---------AGEKVHILGHIPPGDG----------VCLEGW------SINFYRIVNRFRSTIAGQFYGHTHIDEFRVFYD 411 (577)
T ss_pred ---------cCCEEEEEEeeCCCCc----------chhhhh------hHHHHHHHHHHHHhhhhhccccCcceeEEEEec
Confidence 6788999999999531 111111 12223333322 46689999999977655432
Q ss_pred ---CeE--EEecCCCCCCCCCCCCCCceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeecccC
Q 016429 310 ---GIQ--LCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (390)
Q Consensus 310 ---gi~--~~~~~~~g~~~~~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~~~~ 379 (390)
+.+ +.+.+. +...|-+ -.+++|+++++... .+. ..+++||.++-....... ++.-|..+|.
T Consensus 412 e~~~~p~~v~~i~~-svtty~~--~~p~yr~y~~~~~~----~~~-~~d~~ty~~Nlt~an~~~-e~p~W~~~y~ 477 (577)
T KOG3770|consen 412 EETGHPIAVAYIGP-SVTTYYN--KNPGYRIYAVDSTI----SFS-VPDHRTYFYNLTSANLQP-ESPEWELLYT 477 (577)
T ss_pred cccCCceeeeeccc-cceehhc--cCCCceecccCccc----cee-cccceEEEEehhhhcCCC-CCCchHhhhh
Confidence 222 222211 2233322 35899999998221 122 578899999765432112 6677776664
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.9e-12 Score=106.96 Aligned_cols=211 Identities=22% Similarity=0.242 Sum_probs=118.7
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCC--CCChhhHHHHHHHHHhH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF--GFDATDAAKSLNAAFAP 119 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~--~~~~~~~~~~~~~~l~~ 119 (390)
..|||+++||+|-+. ..+..+..++...++|++|++|| ++ ..+......... .++.
T Consensus 2 ~~mkil~vtDlHg~~--------------------~~~~k~~~~~~~~~~D~lviaGD-lt~~~~~~~~~~~~~~-~~e~ 59 (226)
T COG2129 2 KKMKILAVTDLHGSE--------------------DSLKKLLNAAADIRADLLVIAGD-LTYFHFGPKEVAEELN-KLEA 59 (226)
T ss_pred CcceEEEEeccccch--------------------HHHHHHHHHHhhccCCEEEEecc-eehhhcCchHHHHhhh-HHHH
Confidence 469999999999653 23355666666679999999999 55 333322222211 1555
Q ss_pred hHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCC
Q 016429 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~ 199 (390)
+...++|++++|||=|-. ++.+.+....- + +.+ =...+.+ ..+..+--
T Consensus 60 l~~~~~~v~avpGNcD~~------~v~~~l~~~~~-----~------v~~---~v~~i~~-----------~~~~G~Gg- 107 (226)
T COG2129 60 LKELGIPVLAVPGNCDPP------EVIDVLKNAGV-----N------VHG---RVVEIGG-----------YGFVGFGG- 107 (226)
T ss_pred HHhcCCeEEEEcCCCChH------HHHHHHHhccc-----c------ccc---ceEEecC-----------cEEEEecc-
Confidence 666899999999997752 23333332110 0 111 1111211 12222111
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCC-eEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAP-GLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 200 ~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~-~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
+.......+..+++++ +...++.+-+. ...+ .|+.+|.|++..... ...| ....+
T Consensus 108 --sn~tp~nt~~e~~E~~---I~s~l~~~v~~---------~~~~~~Il~~HaPP~gt~~d---~~~g-------~~hvG 163 (226)
T COG2129 108 --SNPTPFNTPREFSEDE---IYSKLKSLVKK---------ADNPVNILLTHAPPYGTLLD---TPSG-------YVHVG 163 (226)
T ss_pred --cCCCCCCCccccCHHH---HHHHHHHHHhc---------ccCcceEEEecCCCCCcccc---CCCC-------ccccc
Confidence 1111111234466666 44444443321 1122 299999998653211 1111 12457
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
+..+++++++-+..+.+|||.|. ......-|=+++.++++- + ..+|-+++++
T Consensus 164 S~~vr~~ieefqP~l~i~GHIHE-s~G~d~iG~TivVNPG~~----~----~g~yA~i~l~ 215 (226)
T COG2129 164 SKAVRKLIEEFQPLLGLHGHIHE-SRGIDKIGNTIVVNPGPL----G----EGRYALIELE 215 (226)
T ss_pred hHHHHHHHHHhCCceEEEeeecc-cccccccCCeEEECCCCc----c----CceEEEEEec
Confidence 78899999998899999999998 455555555777776651 1 2457787876
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.4e-13 Score=125.13 Aligned_cols=85 Identities=22% Similarity=0.271 Sum_probs=55.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC-hh--hHHHHHHH-HHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-AT--DAAKSLNA-AFAP 119 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~-~~--~~~~~~~~-~l~~ 119 (390)
|||+|+||+|+|...... +..+ .....++.+.+.+.+++||+||++|| +++.. .+ .....+.. ++..
T Consensus 1 MKilhiSD~HLG~~~~~~---~~~~-----~~~~~l~~ii~~a~~~~vD~VliaGD-lfD~~~~~~~~~~~~~~~~l~~~ 71 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDP---WFQN-----YQLKFIKQAIEYSKAHGITTWIQLGD-TFDVRKAITQNTMNFVREKIFDL 71 (340)
T ss_pred CeEEEEeeecCCCcCCCh---hhHH-----HHHHHHHHHHHHHHHcCCCEEEECCc-ccCCCCCCCHHHHHHHHHHHHHH
Confidence 799999999999643211 0100 01235566666677899999999999 55443 22 22223333 3444
Q ss_pred hHhCCCCEEEEeCCCCCC
Q 016429 120 AIASNIPWVAVLGNHDQE 137 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~ 137 (390)
+.+.++|+++++||||..
T Consensus 72 L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 72 LKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHCCCeEEEEccCCCcc
Confidence 555789999999999974
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-12 Score=117.99 Aligned_cols=86 Identities=27% Similarity=0.377 Sum_probs=59.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh--HHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~--~~~~~~~~l~~~~ 121 (390)
|||+|+||+|++.......+ .. .....++.+.+.+.+++||+|+++|| +++...+. ....+.+.+..+.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~--~~------~~~~~l~~l~~~~~~~~~D~lli~GD-i~d~~~p~~~~~~~~~~~l~~l~ 71 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSR--LA------EQKAFLDDLLEFAKAEQIDALLVAGD-VFDTANPPAEAQELFNAFFRNLS 71 (253)
T ss_pred CEEEEEhhhcCCCccCCCCh--HH------HHHHHHHHHHHHHHHcCCCEEEECCc-cCCCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999865432100 00 01235566777777899999999999 55554332 3344566777666
Q ss_pred hCC-CCEEEEeCCCCCCC
Q 016429 122 ASN-IPWVAVLGNHDQES 138 (390)
Q Consensus 122 ~~~-ip~~~v~GNHD~~~ 138 (390)
+.+ +|+++++||||...
T Consensus 72 ~~~~i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 72 DANPIPIVVISGNHDSAQ 89 (253)
T ss_pred hcCCceEEEEccCCCChh
Confidence 666 99999999999854
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.7e-13 Score=111.09 Aligned_cols=84 Identities=18% Similarity=0.249 Sum_probs=49.0
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHHhHhHh--
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFAPAIA-- 122 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l~~~~~-- 122 (390)
+++||+|++....... ++ ++ ..+....+.+.++++..+||+||++||++...... ..+..+...+..+..
T Consensus 1 ~~isD~HL~~~~~~~~---l~-~~--~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (156)
T cd08165 1 MFLADTHLLGSILGHW---LD-KL--RREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHP 74 (156)
T ss_pred CccccchhcCCcccHH---HH-HH--hhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccC
Confidence 4689999964332111 00 00 01233455778888889999999999955433211 112222222222222
Q ss_pred CCCCEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQ 136 (390)
Q Consensus 123 ~~ip~~~v~GNHD~ 136 (390)
.++|+++|+||||.
T Consensus 75 ~~~~i~~v~GNHD~ 88 (156)
T cd08165 75 PDLPLHVVVGNHDI 88 (156)
T ss_pred CCCeEEEEcCCCCc
Confidence 36899999999997
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.4e-13 Score=126.90 Aligned_cols=88 Identities=28% Similarity=0.429 Sum_probs=62.1
Q ss_pred eEEEEEecccccC-CCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHHhHh
Q 016429 44 FKILQVADMHFAN-GKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFAPA 120 (390)
Q Consensus 44 ~ki~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l~~~ 120 (390)
|||+|+||+|+|. ..... .+. -...+++..+.+.+.++++|+||++|| +++...+ .....+.+.+..+
T Consensus 1 mkilHtSD~HLG~~~~~~~------~r~--~d~~~~f~~~l~~a~~~~vD~vliAGD-lFd~~~Ps~~a~~~~~~~l~~l 71 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLP------SRL--EDQKKAFDELLEIAKEEKVDFVLIAGD-LFDTNNPSPRALKLFLEALRRL 71 (390)
T ss_pred CeeEEecccccchhhccCc------cch--HHHHHHHHHHHHHHHHccCCEEEEccc-cccCCCCCHHHHHHHHHHHHHh
Confidence 7999999999994 22111 000 012334555566666789999999999 6766543 5556677778877
Q ss_pred HhCCCCEEEEeCCCCCCCCC
Q 016429 121 IASNIPWVAVLGNHDQESTL 140 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~ 140 (390)
...++|+++++||||.....
T Consensus 72 ~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 72 KDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred ccCCCcEEEecCCCCchhcc
Confidence 77899999999999986543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-12 Score=111.10 Aligned_cols=73 Identities=26% Similarity=0.380 Sum_probs=47.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHH------------
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAK------------ 111 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~------------ 111 (390)
=||+.+||+| .+.+.++.+..++.+.+||+||++||++-.....+.|.
T Consensus 6 ~kilA~s~~~--------------------g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~ 65 (255)
T PF14582_consen 6 RKILAISNFR--------------------GDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKS 65 (255)
T ss_dssp -EEEEEE--T--------------------T-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----TH
T ss_pred hhheeecCcc--------------------hHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchh
Confidence 4799999998 24567788899999999999999999555543333222
Q ss_pred -----------HHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 112 -----------SLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 112 -----------~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
.+.+++..+...++|+++||||||.
T Consensus 66 ~i~~e~~~~~e~~~~ff~~L~~~~~p~~~vPG~~Da 101 (255)
T PF14582_consen 66 EINEEECYDSEALDKFFRILGELGVPVFVVPGNMDA 101 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-SEEEEE--TTS-
T ss_pred hhhhhhhhhHHHHHHHHHHHHhcCCcEEEecCCCCc
Confidence 3446666666689999999999997
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-12 Score=108.51 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=50.9
Q ss_pred CCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCC
Q 016429 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (390)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (390)
...++++|.+..... .....+..++...+++++++||.|. ......+++.+++.|+.+..
T Consensus 81 ~~~i~~~H~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~GH~H~-~~~~~~~~~~~~~~Gs~~~~ 140 (156)
T PF12850_consen 81 GFKILLSHGHPYDVQ-------------------WDPAELREILSRENVDLVLHGHTHR-PQVFKIGGIHVINPGSIGGP 140 (156)
T ss_dssp TEEEEEESSTSSSST-------------------TTHHHHHHHHHHTTSSEEEESSSSS-EEEEEETTEEEEEE-GSSS-
T ss_pred CCeEEEECCCCcccc-------------------cChhhhhhhhcccCCCEEEcCCccc-ceEEEECCEEEEECCcCCCC
Confidence 468899998653310 1334455666677899999999999 45555788998888887655
Q ss_pred CCCCCCCCceeEEEEEe
Q 016429 323 AYGKAGWERRARVVVAS 339 (390)
Q Consensus 323 ~~~~~~~~~g~rv~ei~ 339 (390)
..+. +++|-+++++
T Consensus 141 ~~~~---~~~~~i~~~~ 154 (156)
T PF12850_consen 141 RHGD---QSGYAILDIE 154 (156)
T ss_dssp SSSS---SEEEEEEEET
T ss_pred CCCC---CCEEEEEEEe
Confidence 4432 6888888875
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-11 Score=107.14 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=44.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
+||+++||+|.... ....+.++..+||+|+++||++ +.. . +.+..+.+.
T Consensus 1 ~rIa~isDiHg~~~----------------------~~~~~~l~~~~pD~Vl~~GDi~-~~~----~----~~~~~l~~l 49 (238)
T cd07397 1 LRIAIVGDVHGQWD----------------------LEDIKALHLLQPDLVLFVGDFG-NES----V----QLVRAISSL 49 (238)
T ss_pred CEEEEEecCCCCch----------------------HHHHHHHhccCCCEEEECCCCC-cCh----H----HHHHHHHhC
Confidence 68999999994321 1113456678999999999954 221 1 222333345
Q ss_pred CCCEEEEeCCCCCCCCC
Q 016429 124 NIPWVAVLGNHDQESTL 140 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~ 140 (390)
..|+++|+||||.....
T Consensus 50 ~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 50 PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CCCeEEEcCCCcccccc
Confidence 68999999999987653
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.7e-12 Score=115.35 Aligned_cols=77 Identities=25% Similarity=0.334 Sum_probs=51.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH--hcCCCEEEEcCCcCCC---CC-hhhHHHHHHHHH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS--AEKPDLIVFTGDNIFG---FD-ATDAAKSLNAAF 117 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~--~~~pD~Vv~~GD~i~~---~~-~~~~~~~~~~~l 117 (390)
|||+++||+|++.... ...+.+.+.++ +.+||+|+++||++.. +. .......+.+.+
T Consensus 1 M~i~~iSDlHl~~~~~-----------------~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l 63 (241)
T PRK05340 1 MPTLFISDLHLSPERP-----------------AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAAL 63 (241)
T ss_pred CcEEEEeecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHH
Confidence 6899999999986421 11233444443 3689999999995532 11 112234455666
Q ss_pred hHhHhCCCCEEEEeCCCCCC
Q 016429 118 APAIASNIPWVAVLGNHDQE 137 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~ 137 (390)
+.+.+.++|+++++||||+.
T Consensus 64 ~~l~~~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 64 KALSDSGVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHcCCeEEEEeCCCchh
Confidence 66666789999999999973
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-12 Score=105.44 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=37.7
Q ss_pred HHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 281 ~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
.+..+....+++++++||+|. ......+++.++..|+.+-...+ -.++|-+++++
T Consensus 97 ~l~~~~~~~~~d~vi~GHtH~-~~~~~~~~~~~iNpGs~~~~~~~---~~~~~~il~~~ 151 (158)
T TIGR00040 97 VLEYLAKELGVDVLIFGHTHI-PVAEELRGILLINPGSLTGPRNG---NTPSYAILDVD 151 (158)
T ss_pred HHHHHHhccCCCEEEECCCCC-CccEEECCEEEEECCccccccCC---CCCeEEEEEec
Confidence 345566666789999999999 45566788888877765522111 14578888876
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.9e-12 Score=103.39 Aligned_cols=198 Identities=21% Similarity=0.222 Sum_probs=103.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|+|..|||+|+..+.+.+..- +.+.|..+. .+..+.....+ ..-|.|++.||+-+...-++..+.+ +.+. ++
T Consensus 1 M~iyaiaDLHLa~~~pKpM~v-FGe~W~gh~-ekI~k~W~~~v--~~eDiVllpGDiSWaM~l~ea~~Dl-~~i~---~L 72 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEV-FGEPWSGHH-EKIKKHWRSKV--SPEDIVLLPGDISWAMRLEEAEEDL-RFIG---DL 72 (230)
T ss_pred CceeeeehhhHhhCCCCceee-cCCcccCch-HHHHHHHHhcC--ChhhEEEecccchhheechhhhhhh-hhhh---cC
Confidence 678899999999876544322 223333221 12222222222 2348999999976766555544444 2333 35
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYST 203 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~ 203 (390)
+-.-+.+.||||+++. +...+.+.+ |..+...+ ......||. +.| .+ .-||....
T Consensus 73 PG~K~m~rGNHDYWw~-s~skl~n~l---p~~l~~~n-----~~f~l~n~a--I~G-----------~R--gW~s~~~~- 127 (230)
T COG1768 73 PGTKYMIRGNHDYWWS-SISKLNNAL---PPILFYLN-----NGFELLNYA--IVG-----------VR--GWDSPSFD- 127 (230)
T ss_pred CCcEEEEecCCccccc-hHHHHHhhc---CchHhhhc-----cceeEeeEE--EEE-----------ee--cccCCCCC-
Confidence 5667889999999887 444444432 21111100 011112322 222 12 22331110
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHh-hcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHH
Q 016429 204 VPSVPGYGWIKPSQQFWFEQTSARLQRA-YMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282 (390)
Q Consensus 204 ~~~~~~~g~i~~~q~~Wl~~~l~~l~~~-~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~ 282 (390)
+.-++++.-.-+.+++.+++.. ..+. .......|+|+|+|+.... + ....+
T Consensus 128 ------~e~~te~Deki~~RE~~RLrlsa~a~l---~k~~~~fivM~HYPP~s~~-------------~------t~~~~ 179 (230)
T COG1768 128 ------SEPLTEQDEKIFLREIGRLRLSADAAL---PKGVSKFIVMTHYPPFSDD-------------G------TPGPF 179 (230)
T ss_pred ------cCccchhHHHHHHHHHHHHHHHHHHhc---ccCcCeEEEEEecCCCCCC-------------C------CCcch
Confidence 1114444444444444444431 1110 1245679999999885411 0 11335
Q ss_pred HHHHHcCCeeEEEeccCCCC
Q 016429 283 TTMVAAGDVKAVFTGHDHVN 302 (390)
Q Consensus 283 ~~l~~~~~v~~v~~GH~H~~ 302 (390)
.+++++++|..++.||.|..
T Consensus 180 sevlee~rv~~~lyGHlHgv 199 (230)
T COG1768 180 SEVLEEGRVSKCLYGHLHGV 199 (230)
T ss_pred HHHHhhcceeeEEeeeccCC
Confidence 67777889999999999984
|
|
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.3e-11 Score=101.00 Aligned_cols=57 Identities=12% Similarity=-0.016 Sum_probs=37.4
Q ss_pred HHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCC-CCCCCceeEEEEEe
Q 016429 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG-KAGWERRARVVVAS 339 (390)
Q Consensus 282 ~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~-~~~~~~g~rv~ei~ 339 (390)
+..+.+..+++++++||+|. ......+|+.++..|+.+...-+ .....+.|-+++++
T Consensus 98 ~~~~~~~~~~dvii~GHTH~-p~~~~~~g~~viNPGSv~~~~~~~~~~~~~syail~~~ 155 (178)
T cd07394 98 LAALQRQLDVDILISGHTHK-FEAFEHEGKFFINPGSATGAFSPLDPNVIPSFVLMDIQ 155 (178)
T ss_pred HHHHHHhcCCCEEEECCCCc-ceEEEECCEEEEECCCCCCCCCCCCCCCCCeEEEEEec
Confidence 45555556789999999999 46667789888888877632111 01113467777765
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-11 Score=100.33 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=40.1
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASN 124 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ 124 (390)
||+++||+|.... .++..++|+||++|| +...+....++.+.+.+.. .+
T Consensus 1 ~i~~isD~H~~~~---------------------------~~~~~~~D~vi~~GD-~~~~~~~~~~~~~~~~l~~---~~ 49 (135)
T cd07379 1 RFVCISDTHSRHR---------------------------TISIPDGDVLIHAGD-LTERGTLEELQKFLDWLKS---LP 49 (135)
T ss_pred CEEEEeCCCCCCC---------------------------cCcCCCCCEEEECCC-CCCCCCHHHHHHHHHHHHh---CC
Confidence 5899999995421 123468999999999 4444443333344444443 34
Q ss_pred CC-EEEEeCCCCC
Q 016429 125 IP-WVAVLGNHDQ 136 (390)
Q Consensus 125 ip-~~~v~GNHD~ 136 (390)
.| +++|+||||.
T Consensus 50 ~~~~~~v~GNHD~ 62 (135)
T cd07379 50 HPHKIVIAGNHDL 62 (135)
T ss_pred CCeEEEEECCCCC
Confidence 44 5789999996
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=112.31 Aligned_cols=82 Identities=33% Similarity=0.382 Sum_probs=56.7
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
...+||+|+||+|+.... .....+...+..+.||+|+++||+++. ........+.+.++++
T Consensus 42 ~~~~~iv~lSDlH~~~~~------------------~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L 102 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFR------------------EEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKL 102 (284)
T ss_pred cCCeEEEEeehhhhchhh------------------HHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhh
Confidence 356889999999987532 112333444456788999999997775 2233344566677765
Q ss_pred HhCCCCEEEEeCCCCCCCCCCH
Q 016429 121 IASNIPWVAVLGNHDQESTLSR 142 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~ 142 (390)
. ...+++++.||||+......
T Consensus 103 ~-~~~gv~av~GNHd~~~~~~~ 123 (284)
T COG1408 103 K-APLGVFAVLGNHDYGVDRSN 123 (284)
T ss_pred h-ccCCEEEEeccccccccccc
Confidence 3 57789999999999776544
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-11 Score=103.55 Aligned_cols=91 Identities=23% Similarity=0.252 Sum_probs=53.9
Q ss_pred EEEecccccCCCCCCCCCCCcc-cccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHHhHhHh-
Q 016429 47 LQVADMHFANGKTTPCLDVLPS-QVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFAPAIA- 122 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l~~~~~- 122 (390)
+.+||+|++.........+.-. -.....+...++.+..+++..+||+||++||++.+.... ..+....+.+..+..
T Consensus 1 llvaDpql~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T cd07384 1 LLVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFL 80 (171)
T ss_pred CcccCccccCCCCCCCCchhhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcc
Confidence 4689999997654322111000 000113445667788888889999999999955443221 222323333333221
Q ss_pred -----CCCCEEEEeCCCCCC
Q 016429 123 -----SNIPWVAVLGNHDQE 137 (390)
Q Consensus 123 -----~~ip~~~v~GNHD~~ 137 (390)
.++|+++|+||||..
T Consensus 81 ~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 81 PSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred cccccCCceEEEECCccccC
Confidence 278999999999983
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-11 Score=108.63 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=47.8
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCC---C-ChhhHHHHHHHHHhHh
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFG---F-DATDAAKSLNAAFAPA 120 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~---~-~~~~~~~~~~~~l~~~ 120 (390)
+++||+|++.... ...+.+.+.+.+ .+||+|+++||++.. . ......+.+.+.++.+
T Consensus 2 ~~iSDlHl~~~~~-----------------~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L 64 (231)
T TIGR01854 2 LFISDLHLSPERP-----------------DITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQV 64 (231)
T ss_pred eEEEecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHH
Confidence 7999999986421 111333333333 389999999995542 1 1122334455666666
Q ss_pred HhCCCCEEEEeCCCCCC
Q 016429 121 IASNIPWVAVLGNHDQE 137 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~ 137 (390)
.+.++|+++|+||||+.
T Consensus 65 ~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 65 SDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHCCCeEEEEcCCCchh
Confidence 56689999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-10 Score=97.73 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=36.1
Q ss_pred HHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 285 MVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 285 l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
+....+++++++||+|.. .....+++.+++.|+.+.... .-.+++-+++++
T Consensus 97 ~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~~---~~~~~~~i~~~~ 147 (155)
T cd00841 97 LAKEGGADVVLYGHTHIP-VIEKIGGVLLLNPGSLSLPRG---GGPPTYAILEID 147 (155)
T ss_pred hhhhcCCCEEEECcccCC-ccEEECCEEEEeCCCccCcCC---CCCCeEEEEEec
Confidence 344456899999999994 556678888888877663221 124688888886
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-11 Score=102.95 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=50.9
Q ss_pred EEEecccccCCCCCCCC-CCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHh---HhH-
Q 016429 47 LQVADMHFANGKTTPCL-DVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFA---PAI- 121 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~---~~~- 121 (390)
+.+||+|+-........ .++. ++ ..|....+....+++..+||+||++||++....... .+.+.+.+. ++.
T Consensus 1 llvADPqllg~~~~~~~~~~~~-~~--~~D~yl~r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~-~~e~~e~l~Rf~~If~ 76 (195)
T cd08166 1 LLVADPQILGYQNENFGLGWIA-RW--DSDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIAN-DDEYYSYVQRFINIFE 76 (195)
T ss_pred CcccCccccCCCCCCccccHHH-HH--HHHHHHHHHHHHHHhccCCCEEEEeccccCCCCCCC-HHHHHHHHHHHHHHhc
Confidence 46899999765432100 0110 11 134445566777778889999999999555443221 112222222 221
Q ss_pred -hCCCCEEEEeCCCCCC
Q 016429 122 -ASNIPWVAVLGNHDQE 137 (390)
Q Consensus 122 -~~~ip~~~v~GNHD~~ 137 (390)
..++|+++||||||.+
T Consensus 77 ~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 77 VPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCCCcEEEECCCCCcC
Confidence 3578999999999984
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-10 Score=99.19 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=46.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh---hhHHHHHHHHHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA---TDAAKSLNAAFAPA 120 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~---~~~~~~~~~~l~~~ 120 (390)
|||+++||+|... ..++.+.+.+++.++|.|+++||++..... +..+ ...+.++.+
T Consensus 1 mri~viSD~Hg~~--------------------~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~-~~~~~~~~l 59 (182)
T PRK09453 1 MKLMFASDTHGSL--------------------PATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGY-APKKVAELL 59 (182)
T ss_pred CeEEEEEeccCCH--------------------HHHHHHHHHHHhcCCCEEEEcccccccCcCCCCcccc-CHHHHHHHH
Confidence 7999999999321 124556677777899999999995543211 0000 011233333
Q ss_pred HhCCCCEEEEeCCCCC
Q 016429 121 IASNIPWVAVLGNHDQ 136 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~ 136 (390)
.+.+.++++|+||||.
T Consensus 60 ~~~~~~v~~V~GNhD~ 75 (182)
T PRK09453 60 NAYADKIIAVRGNCDS 75 (182)
T ss_pred HhcCCceEEEccCCcc
Confidence 3456799999999996
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-11 Score=106.27 Aligned_cols=73 Identities=21% Similarity=0.340 Sum_probs=51.0
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC--CEEEEcCCcCCCC----ChhhHHHHHHHHHhHh
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP--DLIVFTGDNIFGF----DATDAAKSLNAAFAPA 120 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p--D~Vv~~GD~i~~~----~~~~~~~~~~~~l~~~ 120 (390)
++|||+|++...+ ...+.+.+.++.+.+ |.+.+.||++..- ..++..+...+.+..+
T Consensus 1 lFISDlHL~~~~p-----------------~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~ 63 (237)
T COG2908 1 LFISDLHLGPKRP-----------------ALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL 63 (237)
T ss_pred CeeeccccCCCCc-----------------HHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH
Confidence 4799999995432 233667777776655 9999999944322 1233445555556666
Q ss_pred HhCCCCEEEEeCCCCC
Q 016429 121 IASNIPWVAVLGNHDQ 136 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~ 136 (390)
.+.+.|+|+++||||+
T Consensus 64 a~~G~~v~~i~GN~Df 79 (237)
T COG2908 64 ARKGTRVYYIHGNHDF 79 (237)
T ss_pred HhcCCeEEEecCchHH
Confidence 6789999999999997
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.6e-10 Score=100.78 Aligned_cols=217 Identities=16% Similarity=0.161 Sum_probs=106.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
++|+|++|+| ...... ... ......+..+.+.+++++|| +++.+||++.+.... .+..-...++.+..
T Consensus 1 ~~il~~nd~~-~~~~~~-~~~--------~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-~~~~g~~~~~~l~~ 69 (257)
T cd07406 1 FTILHFNDVY-EIAPLD-GGP--------VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-TATKGKQMVPVLNA 69 (257)
T ss_pred CeEEEEccce-eecccC-CCC--------cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-hhcCCccHHHHHHh
Confidence 5899999999 211100 000 12344445555555667788 999999966443211 11111223333333
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccC---CCCCccccCcccee-EEeccCCCCCCCCcceEEEEEEeC
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN---PSDAHIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
.+.. +.++||||+... .+.+.+.+++....+-.-+ .........+.-|. +...+ ..+-++.+.+
T Consensus 70 l~~d-~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g---------~kIgviG~~~ 137 (257)
T cd07406 70 LGVD-LACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAG---------VKIGLLGLVE 137 (257)
T ss_pred cCCc-EEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECC---------eEEEEEEEec
Confidence 4544 557999998654 4455565554433221100 00000111112233 33333 1245666665
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
............+..-.+-.+.+++.++++++ .....+|++.|-+..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~---------~~~D~iVvl~H~g~~~d---------------------- 186 (257)
T cd07406 138 EEWLETLTIDPEYVRYRDYVETARELVDELRE---------QGADLIIALTHMRLPND---------------------- 186 (257)
T ss_pred ccccccccCCCCcceEcCHHHHHHHHHHHHHh---------CCCCEEEEEeccCchhh----------------------
Confidence 32110000001121112334445555544543 25677888999877431
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCC
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (390)
..+.+ +-.++++|++||.|. ..+...++..++.++.
T Consensus 187 ~~la~---~~~~iD~IlgGH~H~-~~~~~~~~t~vv~~g~ 222 (257)
T cd07406 187 KRLAR---EVPEIDLILGGHDHE-YILVQVGGTPIVKSGS 222 (257)
T ss_pred HHHHH---hCCCCceEEecccce-eEeeeECCEEEEeCCc
Confidence 11111 125799999999999 4455667777665543
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=103.15 Aligned_cols=77 Identities=22% Similarity=0.222 Sum_probs=44.1
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCC-----ChhhHHHHHHHHHhHhH
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-----DATDAAKSLNAAFAPAI 121 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~-----~~~~~~~~~~~~l~~~~ 121 (390)
++|||+|++..... .......+.......+||.||++||++... ............+....
T Consensus 1 ~~iSDlHlg~~~~~--------------~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~ 66 (217)
T cd07398 1 LFISDLHLGDGGPA--------------ADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA 66 (217)
T ss_pred CEeeeecCCCCCCC--------------HHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH
Confidence 47999999975421 111112222211136999999999955321 11112222212233344
Q ss_pred hCCCCEEEEeCCCCCC
Q 016429 122 ASNIPWVAVLGNHDQE 137 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~ 137 (390)
..++++++++||||..
T Consensus 67 ~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 67 DRGTRVYYVPGNHDFL 82 (217)
T ss_pred HCCCeEEEECCCchHH
Confidence 5789999999999983
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.2e-10 Score=90.42 Aligned_cols=69 Identities=26% Similarity=0.289 Sum_probs=44.9
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCC
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIP 126 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip 126 (390)
+++||+|++..... . ..........++|+||++||++..... .....+.. +........|
T Consensus 1 ~~~gD~h~~~~~~~----------------~--~~~~~~~~~~~~~~vi~~GD~~~~~~~-~~~~~~~~-~~~~~~~~~~ 60 (131)
T cd00838 1 AVISDIHGNLEALE----------------A--VLEAALAAAEKPDFVLVLGDLVGDGPD-PEEVLAAA-LALLLLLGIP 60 (131)
T ss_pred CeeecccCCccchH----------------H--HHHHHHhcccCCCEEEECCcccCCCCC-chHHHHHH-HHHhhcCCCC
Confidence 47899998864321 0 111345556899999999996655443 33323222 3344468999
Q ss_pred EEEEeCCCC
Q 016429 127 WVAVLGNHD 135 (390)
Q Consensus 127 ~~~v~GNHD 135 (390)
+++++||||
T Consensus 61 ~~~~~GNHD 69 (131)
T cd00838 61 VYVVPGNHD 69 (131)
T ss_pred EEEeCCCce
Confidence 999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.1e-10 Score=90.28 Aligned_cols=37 Identities=35% Similarity=0.440 Sum_probs=25.4
Q ss_pred hcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCC
Q 016429 88 AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (390)
Q Consensus 88 ~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD 135 (390)
..++|+|+++|| +.. +.. ..+..+ .+.|+++|+||||
T Consensus 20 ~~~~d~ii~~GD-~~~----~~~----~~~~~~--~~~~~~~V~GN~D 56 (129)
T cd07403 20 LEGVDLILSAGD-LPK----EYL----EYLVTM--LNVPVYYVHGNHD 56 (129)
T ss_pred CCCCCEEEECCC-CCh----HHH----HHHHHH--cCCCEEEEeCCCc
Confidence 578999999999 421 111 222222 3678999999999
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-08 Score=92.68 Aligned_cols=231 Identities=19% Similarity=0.199 Sum_probs=108.2
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCcCCCCChhhHH---H--HHHHHH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAA---K--SLNAAF 117 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~-~GD~i~~~~~~~~~---~--~~~~~l 117 (390)
++|++++|+|-.-.+. .+.. ...........+..+.+.+++++||.+++ +||++.+....... + .....+
T Consensus 1 l~il~t~D~Hg~~~~~-~~~~---~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~ 76 (277)
T cd07410 1 LRILATSDLHGNLLPY-DYYT---DKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMI 76 (277)
T ss_pred CeEEEEeccccceeCc-cccC---CCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHH
Confidence 5899999999432221 1110 00000123334455555566678998887 99966544211111 0 011233
Q ss_pred hHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCc-cccCcccee-EEec-cCCCCCCCCcceEEEE
Q 016429 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAH-IIDGFGNYN-LEIG-GVKGSGFENKSVLNLY 194 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~g~~~y~-~~~~-~~~~~~~~~~~~~~l~ 194 (390)
+.+...+.. ++++||||+..+ .+.+.+.+......+-.-+..... ....+.-|. +.+. + ..+-++
T Consensus 77 ~~ln~~g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g---------~kVgvi 144 (277)
T cd07410 77 AAMNALGYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVG---------VKVGII 144 (277)
T ss_pred HHHHhcCCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCC---------CEEEEE
Confidence 334345665 556799998654 345555555433221111100000 000111232 3333 3 113445
Q ss_pred EEeCCCCCCC--CC-CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCC
Q 016429 195 FLDSGDYSTV--PS-VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEG 271 (390)
Q Consensus 195 ~lds~~~~~~--~~-~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~ 271 (390)
.+-+...... +. ..+....+ -.+.+++.++++++. ....+|+++|.+.......
T Consensus 145 G~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~v~~lr~~---------~~D~IIvl~H~g~~~~~~~------------ 201 (277)
T cd07410 145 GLTTPQIPNWEKPNLIGGLKFTD--PVETAKKYVPKLRAE---------GADVVVVLAHGGFERDLEE------------ 201 (277)
T ss_pred ecCCcccccccCcccCCCcEEcC--HHHHHHHHHHHHHHc---------CCCEEEEEecCCcCCCccc------------
Confidence 4433211100 11 01111122 233455655556542 5667999999877431100
Q ss_pred CCCCCCChHHHHHHHHc-CCeeEEEeccCCCCCccc-ccCCeEEEecC
Q 016429 272 ISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCG-RLTGIQLCYGG 317 (390)
Q Consensus 272 ~~~~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~ 317 (390)
.+ ........|.+. .+|++|++||.|.. ... ..+++.++.++
T Consensus 202 --~~-~~~~~~~~la~~~~~vD~IlgGHsH~~-~~~~~~~~~~v~q~g 245 (277)
T cd07410 202 --SL-TGENAAYELAEEVPGIDAILTGHQHRR-FPGPTVNGVPVVQPG 245 (277)
T ss_pred --cc-CCccHHHHHHhcCCCCcEEEeCCCccc-cccCCcCCEEEEcCC
Confidence 00 111222445554 68999999999984 444 45676665443
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-08 Score=91.02 Aligned_cols=95 Identities=20% Similarity=0.209 Sum_probs=52.3
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
++|+++||+| +.-.+ +.. ......+..+.+.++++.|| ++|.+||++.+..... .......+..+..
T Consensus 1 l~i~~~sD~h-g~~~~--~~~--------~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~ 68 (252)
T cd00845 1 LTILHTNDLH-GHFEP--AGG--------VGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNA 68 (252)
T ss_pred CEEEEecccc-cCccc--cCC--------cCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHh
Confidence 5899999999 32211 100 01333445555566667788 8899999766554321 1111223333333
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
.+. -++++||||+.... +.+.+.+.+..
T Consensus 69 ~g~-d~~~~GNHe~d~g~--~~l~~~~~~~~ 96 (252)
T cd00845 69 LGY-DAVTIGNHEFDYGL--DALAELYKDAN 96 (252)
T ss_pred cCC-CEEeeccccccccH--HHHHHHHHhCC
Confidence 454 44678999986543 34555555543
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.9e-08 Score=88.30 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=48.5
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
++|++++|+|-.-.+. .+.. .........+..+.+.++++.++ +++.+||.+.+.........-...+..+..
T Consensus 1 i~il~tnD~Hg~~~~~-~~~~-----~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~ 74 (288)
T cd07412 1 VQILAINDFHGRLEPP-GKVV-----TVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNA 74 (288)
T ss_pred CeEEEEeccccCccCC-CCcc-----ccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHh
Confidence 4799999999332211 1100 00011233334444444555565 899999965433221111000123333434
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHH
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHI 149 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~ 149 (390)
.++.+ +++||||+..+. +.+.+.+
T Consensus 75 ~g~Da-~t~GNHefd~G~--~~l~~~~ 98 (288)
T cd07412 75 MGVDA-SAVGNHEFDEGY--AELLRRI 98 (288)
T ss_pred hCCee-eeecccccccCH--HHHHHHH
Confidence 56665 667999997653 3444444
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-07 Score=86.62 Aligned_cols=226 Identities=17% Similarity=0.127 Sum_probs=105.4
Q ss_pred eEEEEEecccccCCCCCCC-CCC-CcccccCCCChhHHHHHHHHHHhc-CCCEE-EEcCCcCCCCChhhHHHHHHHHHhH
Q 016429 44 FKILQVADMHFANGKTTPC-LDV-LPSQVAGCSDLNTTAFINRMISAE-KPDLI-VFTGDNIFGFDATDAAKSLNAAFAP 119 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~i~~~-~pD~V-v~~GD~i~~~~~~~~~~~~~~~l~~ 119 (390)
++|++++|+|-.-.+.... ... .+...........+..+.+.++++ .||.+ +.+||++.+... .....-...+..
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHH
Confidence 4799999999764332100 000 000001112334445555555566 89977 569996655432 111112233333
Q ss_pred hHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCc-cccCccceeE-EeccCCCCCCCCcceEEEEEEe
Q 016429 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAH-IIDGFGNYNL-EIGGVKGSGFENKSVLNLYFLD 197 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~g~~~y~~-~~~~~~~~~~~~~~~~~l~~ld 197 (390)
+.. +++.++.||||+... .+.+.+.+.+...++-.-+-.... ....+..|.+ ...+ ..+.++.+.
T Consensus 80 l~~--~g~da~~GNHefd~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g---------~kVgviG~~ 146 (264)
T cd07411 80 LNA--LGVDAMVGHWEFTYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGG---------VKIGVIGQT 146 (264)
T ss_pred HHh--hCCeEEecccccccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECC---------EEEEEEEec
Confidence 333 344443399998654 335555555543322111100000 0000112433 3332 225567776
Q ss_pred CCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCC
Q 016429 198 SGDYSTV-PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (390)
Q Consensus 198 s~~~~~~-~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~ 276 (390)
+...... +.....++.-....+.+++.+.++.++ .....+|++.|.+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~D~iI~l~H~g~~~~-------------------- 198 (264)
T cd07411 147 FPYVPIANPPRFTPGLTFGIREEELQEVVVKLRRE--------EGVDVVVLLSHNGLPVD-------------------- 198 (264)
T ss_pred cCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHh--------CCCCEEEEEecCCchhh--------------------
Confidence 5321110 100011222223455566654444332 35677999999876321
Q ss_pred CChHHHHHHH-HcCCeeEEEeccCCCCCcc--cccCCeEEEecC
Q 016429 277 VNSGFFTTMV-AAGDVKAVFTGHDHVNDFC--GRLTGIQLCYGG 317 (390)
Q Consensus 277 ~~~~~~~~l~-~~~~v~~v~~GH~H~~~~~--~~~~gi~~~~~~ 317 (390)
.++. +..+|++|++||.|..... ...+++.++.++
T Consensus 199 ------~~la~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g 236 (264)
T cd07411 199 ------VELAERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAG 236 (264)
T ss_pred ------HHHHhcCCCCcEEEeCcccccccCcccccCCEEEEEcC
Confidence 1222 2257999999999973221 124666665554
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-08 Score=84.45 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
..++.+.+..+.++++.||+|.. .....+|+.++..|+.+ +..+. .+.+|-+++++
T Consensus 99 ~~l~~la~~~~~Dvli~GHTH~p-~~~~~~~i~~vNPGS~s-~pr~~--~~~sy~il~~~ 154 (172)
T COG0622 99 SLLEYLAKELGADVLIFGHTHKP-VAEKVGGILLVNPGSVS-GPRGG--NPASYAILDVD 154 (172)
T ss_pred HHHHHHHHhcCCCEEEECCCCcc-cEEEECCEEEEcCCCcC-CCCCC--CCcEEEEEEcC
Confidence 45677777778999999999994 44556777766655543 22221 34577777776
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-07 Score=94.45 Aligned_cols=255 Identities=15% Similarity=0.130 Sum_probs=116.4
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHH-------
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSL------- 113 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~------- 113 (390)
-.++|++++|+|-.-.+...+.+.... ......++.+.+.++++.+ -++|.+||++.+..-.+....-
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~----~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~ 113 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDN----KVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKP 113 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcC----CCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccc
Confidence 469999999999764332111110000 0122223334444444444 4888999977665332221100
Q ss_pred ------HHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCC-------ccccCccceeEE-e--
Q 016429 114 ------NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDA-------HIIDGFGNYNLE-I-- 177 (390)
Q Consensus 114 ------~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~g~~~y~~~-~-- 177 (390)
.-++..|..++.. +.++||||+..+ .+.+.+.+......+-.-+-... .....+.-|.+. .
T Consensus 114 ~~~~~~~p~i~~mN~lgyD-a~tlGNHEFdyG--~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~~~~~~~PY~I~e~~v 190 (780)
T PRK09418 114 VDPSYTHPLYRLMNLMKYD-VISLGNHEFNYG--LDYLNKVISKTEFPVINSNVYKDDKDNNEENDQNYFKPYHVFEKEV 190 (780)
T ss_pred cccccchHHHHHHhccCCC-EEeccccccccC--HHHHHHHHhhCCCCEEEeeeecccccccccccccccCCEEEEEeee
Confidence 0122323334444 467899998654 44565655543332211111000 000011224332 1
Q ss_pred ccCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhh
Q 016429 178 GGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYG-WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256 (390)
Q Consensus 178 ~~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g-~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~ 256 (390)
.+..+.. ....+-++.+-+..-.........+ +.-.+-++=+++...+++++ ....+|++.|..+...
T Consensus 191 ~~~~G~~--~gvKIGiIGlttp~~~~w~~~~~~g~v~f~D~veaa~~~v~~Lr~~---------GaDvIIaLsH~G~~~d 259 (780)
T PRK09418 191 EDESGQK--QKVKIGVMGFVPPQVMNWDKANLEGKVKAKDIVETAKKMVPKMKAE---------GADVIVALAHSGVDKS 259 (780)
T ss_pred ccccccc--CCceEEEEEeccccccccccccccCCeEECCHHHHHHHHHHHHHhc---------CCCEEEEEeccCcccc
Confidence 1101100 0112445655442100000000011 11122233355555556542 5677999999877431
Q ss_pred hhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEE
Q 016429 257 AYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVV 336 (390)
Q Consensus 257 ~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ 336 (390)
. . ... ..|... .+.+-.+|++|++||.|. .+....+|+.++.++..| ....++
T Consensus 260 ~--~--------~~~----~ena~~--~l~~v~gID~IlgGHsH~-~~~~~ingv~vvqaG~~G----------~~LG~I 312 (780)
T PRK09418 260 G--Y--------NVG----MENASY--YLTEVPGVDAVLMGHSHT-EVKDVFNGVPVVMPGVFG----------SNLGII 312 (780)
T ss_pred c--c--------ccc----chhhhH--HHhcCCCCCEEEECCCCC-cccccCCCEEEEEcChhh----------cEEEEE
Confidence 0 0 000 012211 133345899999999999 566667888877654322 345566
Q ss_pred EEecc
Q 016429 337 VASLE 341 (390)
Q Consensus 337 ei~~~ 341 (390)
+++.+
T Consensus 313 dL~ld 317 (780)
T PRK09418 313 DMQLK 317 (780)
T ss_pred EEEEE
Confidence 66654
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-08 Score=101.59 Aligned_cols=96 Identities=20% Similarity=0.149 Sum_probs=47.7
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc----CC-CEEEEcCCcCCCCChhhHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE----KP-DLIVFTGDNIFGFDATDAAKSLNA 115 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~----~p-D~Vv~~GD~i~~~~~~~~~~~~~~ 115 (390)
.-+++|++++|+|-.-.+.. . . +.....+..+.+.++++ .| -+++.+||.+.+... .....-..
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~-~--------~-~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-s~~~~g~~ 100 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNE-Y--------G-EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-SDLQDAEP 100 (551)
T ss_pred ceEEEEEEecccCCCccccc-c--------C-CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-hhhcCCch
Confidence 35689999999996532210 0 0 01111222223333322 33 578889996554321 11101112
Q ss_pred HHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHH
Q 016429 116 AFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIV 150 (390)
Q Consensus 116 ~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~ 150 (390)
.+.-+...+..+.. +||||+..+.. .+.+...
T Consensus 101 ~i~~mN~~g~Da~t-lGNHEFD~G~~--~L~~~~~ 132 (551)
T PRK09558 101 DFRGMNLIGYDAMA-VGNHEFDNPLS--VLRKQEK 132 (551)
T ss_pred hHHHHhcCCCCEEc-ccccccCcCHH--HHHHhhc
Confidence 23323345666655 59999987643 4444443
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.7e-08 Score=104.70 Aligned_cols=104 Identities=21% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCcCCCCChhhHHHH--------
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKS-------- 112 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~-~GD~i~~~~~~~~~~~-------- 112 (390)
..++|++++|+|-.-.+.....+. + ........++.+.+.++++.|+.+++ +||++.+..-.+....
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~-~---~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~ 115 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDK-E---TTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNK 115 (1163)
T ss_pred eEEEEEEEecccccccccccccCC-C---CCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCC
Confidence 469999999999764332111110 0 00012333444555555667776555 9997766532111100
Q ss_pred HHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHc
Q 016429 113 LNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (390)
Q Consensus 113 ~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (390)
-...+..|...+..+ .++||||+..+. +.+.+.+...
T Consensus 116 ~~~~i~~mN~lgyDa-~~lGNHEFd~G~--~~L~~~~~~a 152 (1163)
T PRK09419 116 THPMIKAMNALGYDA-GTLGNHEFNYGL--DFLDGTIKGA 152 (1163)
T ss_pred cCHHHHHHhhcCccE-EeecccccccCH--HHHHHHHhcC
Confidence 011222233345444 569999997653 4555555543
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=98.93 E-value=3e-08 Score=97.60 Aligned_cols=213 Identities=14% Similarity=0.264 Sum_probs=85.3
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh---------------
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--------------- 106 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~--------------- 106 (390)
..|||++.|+-++..+. ...+..+++..+|||+|++||.||.+..
T Consensus 104 ~~~r~a~~SC~~~~~~~--------------------~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~ 163 (453)
T PF09423_consen 104 DPFRFAFGSCQNYEDGY--------------------FPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAP 163 (453)
T ss_dssp --EEEEEE----CCC-----------------------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S----
T ss_pred CceEEEEECCCCcccCh--------------------HHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccccc
Confidence 45999999988864322 1344455444799999999999998842
Q ss_pred -----h---hHH-HHHH-----HHHhHhHhCCCCEEEEeCCCCCCCCCC-----------H-------HHHHHHHHHcCC
Q 016429 107 -----T---DAA-KSLN-----AAFAPAIASNIPWVAVLGNHDQESTLS-----------R-------EGVMKHIVTLKN 154 (390)
Q Consensus 107 -----~---~~~-~~~~-----~~l~~~~~~~ip~~~v~GNHD~~~~~~-----------~-------~~~~~~~~~~~~ 154 (390)
. +.+ ..+. ..++.+. ..+|+++++-.||+..+.. . ..+..+.+-.|.
T Consensus 164 ~p~~~~~~l~~yR~~y~~~~~~p~l~~~~-~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~ 242 (453)
T PF09423_consen 164 EPAHEAETLDDYRRRYRQYRSDPDLRRLH-ANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPV 242 (453)
T ss_dssp -SSSS--SHHHHHHHHHHHHT-HHHHHHH-HHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS--
T ss_pred ccccccccHHHHHHHHHHHcCCHHHHHHh-hcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCc
Confidence 0 011 1111 1222232 4789999999999976543 0 011111111111
Q ss_pred CccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCCC------------CCCCCCCCHHHHHHHH
Q 016429 155 TLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS------------VPGYGWIKPSQQFWFE 222 (390)
Q Consensus 155 ~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~~------------~~~~g~i~~~q~~Wl~ 222 (390)
.... +.. ....-++.+.++. .+.+++||+-.|..... .+....++++|++||+
T Consensus 243 r~~~--~~~---~~~~~y~~~~~G~----------~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~ 307 (453)
T PF09423_consen 243 RNPD--PPG---DQGRIYRSFRYGD----------LVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLE 307 (453)
T ss_dssp -GGG---BT---TB----EEEEETT----------TEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHH
T ss_pred cCCC--ccC---CCCceEEEEecCC----------ceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHH
Confidence 1000 000 0111234455543 27899999976654321 1234559999999999
Q ss_pred HHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCe--eEEEeccCC
Q 016429 223 QTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV--KAVFTGHDH 300 (390)
Q Consensus 223 ~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v--~~v~~GH~H 300 (390)
+.|++. ...+.|+..-.|+................+.........+.|..++...++ .++|+|..|
T Consensus 308 ~~L~~s------------~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH 375 (453)
T PF09423_consen 308 DWLASS------------QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVH 375 (453)
T ss_dssp HHHHH--------------SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSS
T ss_pred HHHhcC------------CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcc
Confidence 998752 456788887777643221110000000111111111223333344444445 489999999
Q ss_pred CC
Q 016429 301 VN 302 (390)
Q Consensus 301 ~~ 302 (390)
..
T Consensus 376 ~~ 377 (453)
T PF09423_consen 376 AS 377 (453)
T ss_dssp SE
T ss_pred hh
Confidence 84
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-07 Score=85.96 Aligned_cols=96 Identities=18% Similarity=0.155 Sum_probs=52.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
++|++++|+|..-.+.. . .......+..+.+.++++.+++++.+||.+.+... .....-...++.+...
T Consensus 1 i~il~~~D~H~~~~~~~---~-------~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~ 69 (257)
T cd07408 1 ITILHTNDIHGRIDEDD---N-------NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAV 69 (257)
T ss_pred CEEEEeccCcccccCCC---C-------ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhc
Confidence 58999999995432210 0 01122233334444444467899999996655321 1111112233334446
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
+..++ ++||||+... .+.+.+..+...
T Consensus 70 g~d~~-~~GNHefd~G--~~~l~~~~~~~~ 96 (257)
T cd07408 70 GYDAV-TPGNHEFDYG--LDRLKELSKEAD 96 (257)
T ss_pred CCcEE-ccccccccCC--HHHHHHHHhhCC
Confidence 77774 6799998654 445555555443
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-08 Score=93.14 Aligned_cols=96 Identities=24% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCC-CChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC--hhhHHHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGC-SDLNTTAFINRMISAEKPDLIVFTGDNIFGFD--ATDAAKSLNAAF 117 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~--~~~~~~~~~~~l 117 (390)
+..+||+.+||+|+-...... .......++ .|....+.+..+..-.+||.+++.||+++++. +++++..-.+.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~---~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKK---FLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCc---cccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHH
Confidence 578999999999997643111 000111112 23333344444444579999999999555332 122222222223
Q ss_pred hHhHh--CCCCEEEEeCCCCCCCC
Q 016429 118 APAIA--SNIPWVAVLGNHDQEST 139 (390)
Q Consensus 118 ~~~~~--~~ip~~~v~GNHD~~~~ 139 (390)
..+.. ..+|++.+|||||.+..
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~ 146 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFG 146 (410)
T ss_pred HHhhCCCCCCeeEEeCCccccccc
Confidence 33333 58999999999999765
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-06 Score=80.81 Aligned_cols=210 Identities=19% Similarity=0.169 Sum_probs=98.3
Q ss_pred eEEEEEecccccCCCCCCCCCC-CcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDV-LPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
++|++++|+|-.-.+....... .............+..+.+.++++.++ +++.+||.+.+..... ...-...++.+.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~-~~~g~~~~~~ln 79 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYT-LYKGNADAEFMN 79 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhh-hcCChHHHHHHH
Confidence 5799999999653221100000 000000011233334444444456777 5555999665543211 111122233333
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCC--CCC--ccccCcccee-EEeccCCCCCCCCcceEEEEEE
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--SDA--HIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~--~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~l 196 (390)
..+..++ ++||||+.... +.+.+.+......+-.-+- ... .....+..|. +.+.| ..+-++.+
T Consensus 80 ~~g~D~~-~lGNHefd~G~--~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G---------~kIgviG~ 147 (281)
T cd07409 80 LLGYDAM-TLGNHEFDDGV--EGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGG---------EKIGIIGY 147 (281)
T ss_pred hcCCCEE-EeccccccCCH--HHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECC---------EEEEEEEE
Confidence 4677755 56999997654 3444554443322111110 000 0001112233 23333 12456666
Q ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCC
Q 016429 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (390)
Q Consensus 197 ds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~ 276 (390)
-+...... ..+..+..-.+..+.+++.+++++++ ....+|++.|......
T Consensus 148 ~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~lr~~---------~~D~II~l~H~G~~~d-------------------- 197 (281)
T cd07409 148 TTPDTTEL-SSPGGKVKFLDEIEAAQKEADKLKAQ---------GVNKIIALSHSGYEVD-------------------- 197 (281)
T ss_pred ecCccccc-ccCCCceEECCHHHHHHHHHHHHHhc---------CCCEEEEEeccCchhH--------------------
Confidence 55321111 00011222223456677777777652 4667899999876321
Q ss_pred CChHHHHHHHHc-CCeeEEEeccCCCC
Q 016429 277 VNSGFFTTMVAA-GDVKAVFTGHDHVN 302 (390)
Q Consensus 277 ~~~~~~~~l~~~-~~v~~v~~GH~H~~ 302 (390)
..|.+. .++++|++||.|..
T Consensus 198 ------~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 198 ------KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred ------HHHHHcCCCCcEEEeCCcCcc
Confidence 122222 57999999999984
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.4e-09 Score=90.09 Aligned_cols=86 Identities=23% Similarity=0.384 Sum_probs=52.6
Q ss_pred EEEecccccCCCCCCC-CCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHH-HhHhHhCC
Q 016429 47 LQVADMHFANGKTTPC-LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAA-FAPAIASN 124 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~-l~~~~~~~ 124 (390)
+++||+|+|......- .-..|. ....++++.+.+.+++.+||.||++||++.+...... ...... +......+
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~----~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~-~~~~~~~~~~~~~~~ 75 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPR----GQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSR-QEFEEVAFLRLLAKD 75 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCc----ccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCH-HHHHHHHHHHhccCC
Confidence 4799999996431100 000111 1233577888888889999999999996544332211 111111 22233468
Q ss_pred CCEEEEeCCCCCC
Q 016429 125 IPWVAVLGNHDQE 137 (390)
Q Consensus 125 ip~~~v~GNHD~~ 137 (390)
+|+++++||||..
T Consensus 76 ~~v~~i~GNHD~~ 88 (172)
T cd07391 76 VDVILIRGNHDGG 88 (172)
T ss_pred CeEEEEcccCccc
Confidence 9999999999973
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-07 Score=89.01 Aligned_cols=92 Identities=25% Similarity=0.408 Sum_probs=61.1
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHh--
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFA-- 118 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~-- 118 (390)
++.+||++.||.|+|.+...+.+. .....+++.+.....++++|+|+..|| +++.+.+.. ..+.+.++
T Consensus 11 entirILVaTD~HlGY~EkD~vrg--------~DSf~tFeEIl~iA~e~~VDmiLlGGD-LFHeNkPSr-~~L~~~i~lL 80 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRG--------DDSFVTFEEILEIAQENDVDMILLGGD-LFHENKPSR-KTLHRCLELL 80 (646)
T ss_pred ccceEEEEeecCccccccCCcccc--------cchHHHHHHHHHHHHhcCCcEEEecCc-ccccCCccH-HHHHHHHHHH
Confidence 678999999999999876433211 012346677777777899999999999 666654421 11111111
Q ss_pred ----------------------------------HhHhCCCCEEEEeCCCCCCCCCCH
Q 016429 119 ----------------------------------PAIASNIPWVAVLGNHDQESTLSR 142 (390)
Q Consensus 119 ----------------------------------~~~~~~ip~~~v~GNHD~~~~~~~ 142 (390)
+-..-.||++.|-||||...+.++
T Consensus 81 RryClgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG~~~ 138 (646)
T KOG2310|consen 81 RRYCLGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSGDGR 138 (646)
T ss_pred HHHccCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCccccc
Confidence 111246899999999999876553
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.3e-07 Score=96.76 Aligned_cols=218 Identities=14% Similarity=0.082 Sum_probs=106.9
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCcCCCCChhhHHHHHHHHHhHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~-~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
.+++|++++|+|-... ....+..+.+.+++++||.+++ +||++.+... .....-...+..+
T Consensus 659 ~~l~Il~~nD~Hg~l~-----------------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~l 720 (1163)
T PRK09419 659 WELTILHTNDFHGHLD-----------------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMM 720 (1163)
T ss_pred eEEEEEEEeecccCCC-----------------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHH
Confidence 4599999999993221 1222344445556678998877 9996654421 1111112233333
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcC------------CCc--ccc-CCCCCccccCccceeE-EeccCCCCC
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLK------------NTL--SQV-NPSDAHIIDGFGNYNL-EIGGVKGSG 184 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~------------~~~--~~~-~p~~~~~~~g~~~y~~-~~~~~~~~~ 184 (390)
...+.. ++++||||+..+. +.+.+++.... ..+ ..+ ............-|.+ .+.|
T Consensus 721 n~lg~d-~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G----- 792 (1163)
T PRK09419 721 KEMGYD-ASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG----- 792 (1163)
T ss_pred hCcCCC-EEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC-----
Confidence 333443 5599999997654 34555554322 000 000 0000000001112332 3322
Q ss_pred CCCcceEEEEEEeCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCC
Q 016429 185 FENKSVLNLYFLDSGDY--STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQS 262 (390)
Q Consensus 185 ~~~~~~~~l~~lds~~~--~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 262 (390)
..+-++.+-+..- ...+.. ..++--.+..+.+++..++++++ .....+|+++|....... .
T Consensus 793 ----~kIgiiGltt~~~~~~~~p~~-~~~l~f~d~~e~~~~~v~~Lr~~--------~~~D~VV~LsH~G~~~d~--~-- 855 (1163)
T PRK09419 793 ----KKVGFIGLTTPETAYKTSPGN-VKNLEFKDPAEAAKKWVKELKEK--------EKVDAIIALTHLGSNQDR--T-- 855 (1163)
T ss_pred ----EEEEEEEecccccccccCCCC-cCCcEEcCHHHHHHHHHHHHHhh--------cCCCEEEEEecCCccccc--c--
Confidence 1245666654211 011110 01222223455577777767632 256789999998774310 0
Q ss_pred CcccccCCCCCCCCCChHHHHHHHH-cCCeeEEEeccCCCCCcccccCCeEEEecC
Q 016429 263 NFTGVRQEGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVNDFCGRLTGIQLCYGG 317 (390)
Q Consensus 263 ~~~g~~~e~~~~~~~~~~~~~~l~~-~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~ 317 (390)
.+ ......|.+ -.+|++|+.||.|. ......+++.++-++
T Consensus 856 --~~------------~~~~~~lA~~v~gIDvIigGHsH~-~~~~~v~~~~ivqag 896 (1163)
T PRK09419 856 --TG------------EITGLELAKKVKGVDAIISAHTHT-LVDKVVNGTPVVQAY 896 (1163)
T ss_pred --cc------------ccHHHHHHHhCCCCCEEEeCCCCc-cccccCCCEEEEeCC
Confidence 00 111233333 35799999999998 444556777666543
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.7e-08 Score=86.34 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=53.5
Q ss_pred EEEEEecccccCCCCCCCCC-CCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 45 KILQVADMHFANGKTTPCLD-VLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
+.+++||+|++......-+. ..|. ......++.+.+.++..+||.||++||+.........++.+.+.++. .
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~----~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~---~ 88 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPG----FQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEV---T 88 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCCh----hHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHh---c
Confidence 46899999999643210000 0111 11235667777777888999999999955433322334445445543 3
Q ss_pred CCCEEEEeCCCCC
Q 016429 124 NIPWVAVLGNHDQ 136 (390)
Q Consensus 124 ~ip~~~v~GNHD~ 136 (390)
..++++|+||||.
T Consensus 89 ~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 FRDLILIRGNHDA 101 (225)
T ss_pred CCcEEEECCCCCC
Confidence 5699999999996
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.4e-07 Score=70.96 Aligned_cols=80 Identities=18% Similarity=0.183 Sum_probs=44.8
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHH-HHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTA-FINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
.+-++||+||+...--...... .-...-+ .+....+..+| |.|.+.||+..+.+... .+..+++.
T Consensus 5 mmyfisDtHfgh~nvi~~~pfs-------n~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~---~a~~Iler--- 71 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFS-------NPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER---AAGLILER--- 71 (186)
T ss_pred EEEEecccccCCcceeecCCCC-------CHHHHhHHHHHhHHhcCCccceEEEecccccccchhh---HHHHHHHH---
Confidence 4789999999965421111000 0001111 12222233455 89999999776655422 33344443
Q ss_pred CCCCEEEEeCCCCCC
Q 016429 123 SNIPWVAVLGNHDQE 137 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~ 137 (390)
++-....|+||||-.
T Consensus 72 LnGrkhlv~GNhDk~ 86 (186)
T COG4186 72 LNGRKHLVPGNHDKC 86 (186)
T ss_pred cCCcEEEeeCCCCCC
Confidence 466679999999973
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=78.47 Aligned_cols=93 Identities=22% Similarity=0.189 Sum_probs=42.7
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCCh-hHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHH-HHHHHHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL-NTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAK-SLNAAFA 118 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~-~~~~~l~ 118 (390)
.+++|+|++|+|-.-.+... . +......... ...+.+.+..+++.|+ +++.+||.+.+..-..... .-...++
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~-~---~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~ 79 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLN-D---PNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNP 79 (282)
T ss_pred ceEEEEEEcccccCCcCcCC-c---ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHH
Confidence 57899999999953221100 0 0000001111 1123333333344666 6677999666543211110 0111222
Q ss_pred HhHhCCCCEEEEeCCCCCCCC
Q 016429 119 PAIASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~ 139 (390)
-|...+.. ++++||||+...
T Consensus 80 ~mN~mgyD-a~tlGNHEFd~g 99 (282)
T cd07407 80 IFRMMPYD-LLTIGNHELYNY 99 (282)
T ss_pred HHHhcCCc-EEeecccccCcc
Confidence 22223333 468999999654
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-07 Score=93.32 Aligned_cols=84 Identities=13% Similarity=0.217 Sum_probs=56.4
Q ss_pred cCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH---------hcCCCEEEEcCCcCCCCCh---
Q 016429 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---------AEKPDLIVFTGDNIFGFDA--- 106 (390)
Q Consensus 39 ~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~---------~~~pD~Vv~~GD~i~~~~~--- 106 (390)
..+..++|+++||+|++.... ....+..+.+.+. +.+||.||++||++.+.+.
T Consensus 239 ~~~~~~~i~~ISDlHlgs~~~---------------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~ 303 (504)
T PRK04036 239 TKDEKVYAVFISDVHVGSKEF---------------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPG 303 (504)
T ss_pred cCCCccEEEEEcccCCCCcch---------------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCcc
Confidence 346779999999999986531 1233455666666 6789999999997654220
Q ss_pred -------h---hHHHHHHHHHhHhHhCCCCEEEEeCCCCCCC
Q 016429 107 -------T---DAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (390)
Q Consensus 107 -------~---~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~ 138 (390)
. ..++.+.+.+..+ ...+|++++|||||...
T Consensus 304 ~~~~~~~~~~~~~~~~l~~~L~~L-~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 304 QEEELEIVDIYEQYEAAAEYLKQI-PEDIKIIISPGNHDAVR 344 (504)
T ss_pred chhhccchhhHHHHHHHHHHHHhh-hcCCeEEEecCCCcchh
Confidence 0 1123444555544 25789999999999753
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-05 Score=81.87 Aligned_cols=105 Identities=23% Similarity=0.253 Sum_probs=52.8
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHH--H----
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKS--L---- 113 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~--~---- 113 (390)
...++|++.+|+|-.-.+...+.+. +.. ......+..+.+.++++.+ -++|-+||++.+..-.+.... +
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~-~~~---~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~ 98 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDK-PTE---KFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGD 98 (649)
T ss_pred CceEEEEEEcccccCccCCccccCC-ccc---ccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCC
Confidence 3579999999999764332111110 000 0122223334444444444 478889997665532221110 0
Q ss_pred -HHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHc
Q 016429 114 -NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (390)
Q Consensus 114 -~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (390)
.-.+..|...+.. +.++||||+..+. +.+.+.+...
T Consensus 99 ~~p~i~amN~lgyD-a~tlGNHEFd~G~--~~L~~~~~~a 135 (649)
T PRK09420 99 VHPVYKAMNTLDYD-VGNLGNHEFNYGL--DYLKKALAGA 135 (649)
T ss_pred cchHHHHHHhcCCc-EEeccchhhhcCH--HHHHHHHhcC
Confidence 0123333334443 5678999987653 4565655543
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-06 Score=86.74 Aligned_cols=232 Identities=17% Similarity=0.134 Sum_probs=112.0
Q ss_pred cCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCcCCCCChhhH---HHHHH
Q 016429 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDATDA---AKSLN 114 (390)
Q Consensus 39 ~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~Vv~~GD~i~~~~~~~~---~~~~~ 114 (390)
....+++|+|++|+|-.-.......+ ... .........+.+.++++ +..++|-+||++.+..-... .....
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~-~~~----~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~ 96 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDD-GDT----DGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTV 96 (517)
T ss_pred cCceeEEEEEeccccccceecccccc-Ccc----cccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHH
Confidence 44678999999999976542111000 000 01222233344444444 45789999997766432221 01122
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccC--CCCCccccC-ccceeEEeccCCCCCCCCcceE
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDG-FGNYNLEIGGVKGSGFENKSVL 191 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g-~~~y~~~~~~~~~~~~~~~~~~ 191 (390)
+++.. .+.. +.+.|||++..+. +.+.+.......++-.-+ ......... ..+..+.+.+ ..+
T Consensus 97 ~~mN~---m~yD-a~tiGNHEFd~g~--~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g---------~KI 161 (517)
T COG0737 97 DLLNA---LGYD-AMTLGNHEFDYGL--EALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGG---------VKI 161 (517)
T ss_pred HHHhh---cCCc-EEeecccccccCH--HHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCC---------eEE
Confidence 22222 2322 4578999997653 345555443322211100 010000111 1222333333 225
Q ss_pred EEEEEeCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccC
Q 016429 192 NLYFLDSGDYS--TVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQ 269 (390)
Q Consensus 192 ~l~~lds~~~~--~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~ 269 (390)
-++.+-+.... ..++ ..-++.-.+..+++++.+.+++++ ....+|++.|.++....... ...
T Consensus 162 giIG~~~~~~~~~~~~~-~~~~~~f~d~~e~~~~~i~elk~~---------~vD~iI~LsH~G~~~d~~~~------~~~ 225 (517)
T COG0737 162 GIIGLTTPTIPTWEKPN-AIEGVTFRDPIEAAKKYIPELKGE---------GVDVIIALSHLGIEDDLELA------SEV 225 (517)
T ss_pred EEEEecCCccccccccc-ccCCcEEcCHHHHHHHHHHHHHhc---------CCCEEEEEeccCcCcccccc------ccc
Confidence 56776652111 1111 123444446788888888888753 36789999999885421111 000
Q ss_pred CCCCCCCCChHHHHHHHHcCCeeEEEeccCCCC----CcccccCCeEEEecC
Q 016429 270 EGISSASVNSGFFTTMVAAGDVKAVFTGHDHVN----DFCGRLTGIQLCYGG 317 (390)
Q Consensus 270 e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~----~~~~~~~gi~~~~~~ 317 (390)
+.. ..... ..+++++.||.|.. ......+++.++.++
T Consensus 226 ~~~----------~~~~~-~~iD~i~~GH~H~~~~~~~~~~~~~~t~ivqag 266 (517)
T COG0737 226 PGD----------VDVAV-PGIDLIIGGHSHTVFPGGDKPGTVNGTPIVQAG 266 (517)
T ss_pred ccc----------ccccc-cCcceEeccCCcccccCCcccCccCCEEEEccC
Confidence 000 00000 34999999999952 112234666666554
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=84.67 Aligned_cols=76 Identities=17% Similarity=0.282 Sum_probs=48.1
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-----CCCEEEEcCCcCCCCC----h---------hh
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-----KPDLIVFTGDNIFGFD----A---------TD 108 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-----~pD~Vv~~GD~i~~~~----~---------~~ 108 (390)
+++||+|++.... ....++.+.+.++.. ++|.||++||++.... . .+
T Consensus 2 ~~iSDlHl~~~~~---------------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~ 66 (243)
T cd07386 2 VFISDVHVGSKTF---------------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYE 66 (243)
T ss_pred EEecccCCCchhh---------------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHH
Confidence 6899999986431 123345666766654 5699999999654421 0 01
Q ss_pred HHHHHHHHHhHhHhCCCCEEEEeCCCCCCC
Q 016429 109 AAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (390)
Q Consensus 109 ~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~ 138 (390)
....+.+.++.+ ..++|++++|||||...
T Consensus 67 ~~~~~~~~l~~L-~~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 67 QYEEAAEYLSDV-PSHIKIIIIPGNHDAVR 95 (243)
T ss_pred HHHHHHHHHHhc-ccCCeEEEeCCCCCccc
Confidence 123344444443 24699999999999854
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.5e-05 Score=73.43 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=46.7
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc----CC-CEEEEcCCcCCCCChhhHHHHHHHHHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE----KP-DLIVFTGDNIFGFDATDAAKSLNAAFA 118 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~----~p-D~Vv~~GD~i~~~~~~~~~~~~~~~l~ 118 (390)
++|++++|+|-.-.+.... ......+..+.+.++++ .+ -+++-+||.+.+... .....-...++
T Consensus 1 ltIl~tnD~Hg~l~~~~~~----------~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~ 69 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTG----------EYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFR 69 (285)
T ss_pred CEEEEEcccccccccCCCC----------CccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHH
Confidence 5799999999654321100 01222223333333332 33 488999996544321 11111112223
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHH
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIV 150 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~ 150 (390)
.+...+.... ++||||+..+. +.+.+...
T Consensus 70 ~~n~~g~Da~-~~GNHEfD~G~--~~L~~~~~ 98 (285)
T cd07405 70 GMNLVGYDAM-AVGNHEFDNPL--EVLRQQMK 98 (285)
T ss_pred HHHhhCCcEE-eecccccccCH--HHHHHHHh
Confidence 3334566666 55999998764 33444433
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.4e-05 Score=80.99 Aligned_cols=225 Identities=21% Similarity=0.163 Sum_probs=101.7
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHH-------
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSL------- 113 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~------- 113 (390)
-.++|++++|+|-.-.+...+.+ .+. .......+..+.+.++++.+ -++|.+||++.+..-.......
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~-~~~---~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~ 189 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQD-KPS---QTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGE 189 (814)
T ss_pred eEEEEEEEEeecCCccccccccc-Ccc---ccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCc
Confidence 46999999999976433211111 000 00122222333344444545 4788999977664322211000
Q ss_pred -HHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCC-ccccCccceeEEec---cCCCCCCCCc
Q 016429 114 -NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDA-HIIDGFGNYNLEIG---GVKGSGFENK 188 (390)
Q Consensus 114 -~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~g~~~y~~~~~---~~~~~~~~~~ 188 (390)
.-.+..|..++.. +.++|||||..+. +.+.+++......+-.-+-... .....+.-|.+.-. ..+|.. ..
T Consensus 190 ~~P~i~amN~LGyD-A~tLGNHEFDyG~--d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~--~~ 264 (814)
T PRK11907 190 QHPMYAALEALGFD-AGTLGNHEFNYGL--DYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKK--VT 264 (814)
T ss_pred chHHHHHHhccCCC-EEEechhhcccCH--HHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcc--cc
Confidence 0122323334444 4678999997664 3565665543332211111000 00000122332211 101100 00
Q ss_pred ceEEEEEEeCCCCCCCCCCC-CCC-CCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCccc
Q 016429 189 SVLNLYFLDSGDYSTVPSVP-GYG-WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTG 266 (390)
Q Consensus 189 ~~~~l~~lds~~~~~~~~~~-~~g-~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g 266 (390)
..+-++.+-+..- ...... ..| ..-.+-++-+++...+++++ ....+|++.|..+.... . ..+
T Consensus 265 vKIGiIGlvtp~~-~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~---------GaDvIIaLsH~G~~~d~--~---~~~ 329 (814)
T PRK11907 265 LNIGITGIVPPQI-LNWDKANLEGKVIVRDAVEAVRDIIPTMRAA---------GADIVLVLSHSGIGDDQ--Y---EVG 329 (814)
T ss_pred eEEEEEEeCchhh-hhcccccccCCeEECCHHHHHHHHHHHHHhc---------CCCEEEEEeCCCccccc--c---ccc
Confidence 1244565544211 000000 011 11223455677777777652 56779999998774310 0 000
Q ss_pred ccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCC
Q 016429 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHV 301 (390)
Q Consensus 267 ~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~ 301 (390)
. .|.. ..|.+-.+|++|+.||.|.
T Consensus 330 --~-------En~~--~~LA~v~GIDaIvgGHsH~ 353 (814)
T PRK11907 330 --E-------ENVG--YQIASLSGVDAVVTGHSHA 353 (814)
T ss_pred --c-------cchh--hHHhcCCCCCEEEECCCCC
Confidence 0 1222 1233446799999999999
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-05 Score=80.10 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=94.0
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccc-cCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQV-AGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
++|+|++|+|-.-.+............ .+......+..+.+.++++.| -+++.+||.+.+....... .-...+.-+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~-~g~~~i~~~N 79 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLF-GGRADAALMN 79 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhc-CCHHHHHHHh
Confidence 579999999965322110000000000 011222223333333343444 5888999965543211111 1011222222
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCC--CCcccc-Ccccee-EEeccCCCCCCCCcceEEEEEEe
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS--DAHIID-GFGNYN-LEIGGVKGSGFENKSVLNLYFLD 197 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~-g~~~y~-~~~~~~~~~~~~~~~~~~l~~ld 197 (390)
..+.. +.++||||+..+. +.+.+++.....++-.-+-. ...... .+.-|. +.+.+ ..+-++.+.
T Consensus 80 ~~g~D-a~~lGNHEFd~G~--~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g---------~kIgiiGl~ 147 (550)
T TIGR01530 80 AAGFD-FFTLGNHEFDAGN--EGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAG---------EKIAIIGLD 147 (550)
T ss_pred ccCCC-EEEeccccccCCH--HHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECC---------eEEEEEEee
Confidence 23433 5688999997654 34555554433222111100 000000 111232 23333 125677775
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCC
Q 016429 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (390)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~ 277 (390)
+.........+..+..-.+.++=+++...+++++ ...-+|+++|......
T Consensus 148 ~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~---------g~D~II~lsH~g~~~d--------------------- 197 (550)
T TIGR01530 148 TVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQ---------GINKIILLSHAGFEKN--------------------- 197 (550)
T ss_pred cCcccccccCCCCceEECCHHHHHHHHHHHHHhC---------CCCEEEEEecCCcHHH---------------------
Confidence 5221111111111221122333355555556542 4567899999765321
Q ss_pred ChHHHHHHHH-cCCeeEEEeccCCCC
Q 016429 278 NSGFFTTMVA-AGDVKAVFTGHDHVN 302 (390)
Q Consensus 278 ~~~~~~~l~~-~~~v~~v~~GH~H~~ 302 (390)
..|.+ -.+|++|++||.|..
T Consensus 198 -----~~la~~~~~iD~IigGHsH~~ 218 (550)
T TIGR01530 198 -----CEIAQKINDIDVIVSGDSHYL 218 (550)
T ss_pred -----HHHHhcCCCCCEEEeCCCCcc
Confidence 12222 247999999999983
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.3e-05 Score=69.83 Aligned_cols=61 Identities=15% Similarity=0.113 Sum_probs=36.5
Q ss_pred CCeEEEEecChhhhhhccCC-Cc----ccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcc
Q 016429 243 APGLVYFHIPLPEFAYFDQS-NF----TGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFC 305 (390)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~-~~----~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~ 305 (390)
..-|+++|-|+......... .+ .+. .+.+.....++..+..|++.-+.++.||||.|. .+.
T Consensus 165 ~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~-~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~-~f~ 230 (262)
T cd00844 165 PIDIFLSHDWPRGIYKHGDKKQLLRKKPFF-RQDIESGTLGSPAAEELLKHLKPRYWFSAHLHV-KFA 230 (262)
T ss_pred CCcEEEeCCCCcchhhccchHHhhhcCccc-hhcccccCCCCHHHHHHHHHhCCCEEEEecCCc-ccc
Confidence 46899999977543221100 00 000 011112234667788888888899999999998 444
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.2e-07 Score=74.84 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=43.8
Q ss_pred EEEecccccCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 47 LQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 47 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
.++||+|++......... + .... ....+.+.+.+.+ .++|.|+++||++ ..+..... .+.++ +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~--~----~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~-~~~~~~~~---~~~l~---~~ 68 (168)
T cd07390 2 YFTSDTHFGHANILRFCN--R----PFDDVEEMDEALIRNWNETVGPDDTVYHLGDFS-FGGKAGTE---LELLS---RL 68 (168)
T ss_pred eEecccccCCHHHHccCC--C----CCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCC-CCCChHHH---HHHHH---hC
Confidence 479999999753211000 0 0011 1122444444444 3789999999954 44332221 23333 35
Q ss_pred CCCEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQE 137 (390)
Q Consensus 124 ~ip~~~v~GNHD~~ 137 (390)
+.|+++|+||||..
T Consensus 69 ~~~~~~v~GNHD~~ 82 (168)
T cd07390 69 NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCeEEEeCCCCch
Confidence 67999999999973
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.00016 Score=67.37 Aligned_cols=91 Identities=18% Similarity=0.138 Sum_probs=45.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc----C-CCEEEEcCCcCCCCChhhHHH-------
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE----K-PDLIVFTGDNIFGFDATDAAK------- 111 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~----~-pD~Vv~~GD~i~~~~~~~~~~------- 111 (390)
++|+|++|+|-..... .....+..+.+.++++ . .-+++.+||.+.+........
T Consensus 1 l~IlhtnD~Hg~~~~~--------------gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~ 66 (313)
T cd08162 1 LQLLHTSDGESGLLAE--------------DDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGD 66 (313)
T ss_pred CeEEEecccccCcccc--------------CCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhcccccccc
Confidence 5799999999543211 1122223333444333 3 348999999554432111100
Q ss_pred HHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHH
Q 016429 112 SLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (390)
Q Consensus 112 ~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (390)
.-...+.-|...+.. +.++||||+..+. +.+.+++..
T Consensus 67 ~G~~~i~~mN~~g~D-a~tlGNHEFD~G~--~~L~~~~~~ 103 (313)
T cd08162 67 PGRADILILNALGVQ-AIALGNHEFDLGT--DELADLIRP 103 (313)
T ss_pred CChHHHHHHhccCCc-EEeccccccccCH--HHHHHHHHh
Confidence 001122222234444 4578999987654 345555544
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.3e-06 Score=76.15 Aligned_cols=70 Identities=29% Similarity=0.359 Sum_probs=43.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
||+++|||+|.. ...+..+.+.++.. ..|.||++||+|.... ...+.+...+. +.
T Consensus 1 m~~~~IsDIHG~--------------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~--~s~~v~~~l~~-~~ 57 (235)
T PHA02239 1 MAIYVVPDIHGE--------------------YQKLLTIMDKINNERKPEETIVFLGDYVDRGK--RSKDVVNYIFD-LM 57 (235)
T ss_pred CeEEEEECCCCC--------------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCC--ChHHHHHHHHH-Hh
Confidence 689999999931 12234455555433 3599999999665442 22333333332 32
Q ss_pred hCCCCEEEEeCCCCC
Q 016429 122 ASNIPWVAVLGNHDQ 136 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~ 136 (390)
..+.++++++||||.
T Consensus 58 ~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 58 SNDDNVVTLLGNHDD 72 (235)
T ss_pred hcCCCeEEEECCcHH
Confidence 345689999999996
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.8e-05 Score=66.38 Aligned_cols=81 Identities=17% Similarity=0.283 Sum_probs=48.1
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASN 124 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ 124 (390)
||+++.|+=-..+. ......+.+..++.++||+|..||...+..... .+..+.+.+.+
T Consensus 1 ~ilfigdi~g~~G~-----------------~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~-----~~~~~~L~~~G 58 (255)
T cd07382 1 KILFIGDIVGKPGR-----------------KAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT-----PKIAKELLSAG 58 (255)
T ss_pred CEEEEEeCCCHHHH-----------------HHHHHHHHHHHHHCCCCEEEECCccccCCCCCC-----HHHHHHHHhcC
Confidence 57888887633221 122344555555678999999999666542111 12233344578
Q ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHc
Q 016429 125 IPWVAVLGNHDQESTLSREGVMKHIVTL 152 (390)
Q Consensus 125 ip~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (390)
+.++.+ |||++... ++.+++...
T Consensus 59 ~D~iTl-GNH~fD~g----el~~~l~~~ 81 (255)
T cd07382 59 VDVITM-GNHTWDKK----EILDFIDEE 81 (255)
T ss_pred CCEEEe-cccccCcc----hHHHHHhcC
Confidence 886665 99998665 455555443
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.8e-05 Score=75.28 Aligned_cols=104 Identities=23% Similarity=0.246 Sum_probs=51.8
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHH-------HH
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKS-------LN 114 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~-------~~ 114 (390)
.++|++++|+|-.-.+...+.+ .+. .+.....+..+.+.++++.+ -++|-+||++.+..-...... ..
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~-~~~---~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~ 77 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKD-KPT---DKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMH 77 (626)
T ss_pred eEEEEEEcCCccCccCCcccCC-CCC---CCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcC
Confidence 5899999999976433211111 000 01122223333334444433 588889997665532221110 00
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
-.++.|...+.. +.++||||+..+. +.+.+.+....
T Consensus 78 p~~~~mN~lgyD-a~tlGNHEFd~G~--~~L~~~~~~a~ 113 (626)
T TIGR01390 78 PVYKAMNLLKYD-VGNLGNHEFNYGL--PFLKQAIAAAK 113 (626)
T ss_pred hHHHHHhhcCcc-EEecccccccccH--HHHHHHHHhCC
Confidence 122223234444 4688999987653 45556555433
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.7e-06 Score=74.17 Aligned_cols=89 Identities=19% Similarity=0.242 Sum_probs=54.5
Q ss_pred eEEEEEecccccCCCCCCC-CCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh--hhHHHHHHHHHhHh
Q 016429 44 FKILQVADMHFANGKTTPC-LDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPA 120 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~--~~~~~~~~~~l~~~ 120 (390)
-+.+++||+|++......- --..| .+....+...+.+.++.++|+-||+.||+-.+.+. ..+......+++.+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP----~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~ 95 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLP----RYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELL 95 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccC----chhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHh
Confidence 4568999999995432100 00011 11234566777778889999999999994333332 23344444444433
Q ss_pred HhCCCCEEEEeCCCCCCC
Q 016429 121 IASNIPWVAVLGNHDQES 138 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~ 138 (390)
+.. -|+++.||||-.-
T Consensus 96 -~~~-evi~i~GNHD~~i 111 (235)
T COG1407 96 -DER-EVIIIRGNHDNGI 111 (235)
T ss_pred -ccC-cEEEEeccCCCcc
Confidence 222 5999999999743
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.5e-05 Score=73.85 Aligned_cols=215 Identities=15% Similarity=0.288 Sum_probs=110.2
Q ss_pred HHHHHHhcCCCEEEEcCCcCCCCChhh-------------------------HH-HHH-----HHHHhHhHhCCCCEEEE
Q 016429 82 INRMISAEKPDLIVFTGDNIFGFDATD-------------------------AA-KSL-----NAAFAPAIASNIPWVAV 130 (390)
Q Consensus 82 l~~~i~~~~pD~Vv~~GD~i~~~~~~~-------------------------~~-~~~-----~~~l~~~~~~~ip~~~v 130 (390)
.-+.+.+++|||||+.||.|+.++... .+ ..+ +.-|+.+ ....||++.
T Consensus 160 aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaa-hA~~Pwi~~ 238 (522)
T COG3540 160 AYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAA-HAAFPWIVQ 238 (522)
T ss_pred HHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHh-hccCCEEEE
Confidence 445566788999999999999875321 00 001 1122221 257899999
Q ss_pred eCCCCCCCCCCHH-------------------HHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceE
Q 016429 131 LGNHDQESTLSRE-------------------GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVL 191 (390)
Q Consensus 131 ~GNHD~~~~~~~~-------------------~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~ 191 (390)
+-.|+..++.+.. ....+++-.|.......+ .+.-+=++.++ +.+
T Consensus 239 WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~------~~~lYR~~tyG----------~La 302 (522)
T COG3540 239 WDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPT------DGRLYRSFTYG----------PLA 302 (522)
T ss_pred eccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCc------cceeeeeeccc----------ccc
Confidence 9999998764321 111122222222111111 11112223332 237
Q ss_pred EEEEEeCCCCCCCC----CC---------CCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhh
Q 016429 192 NLYFLDSGDYSTVP----SV---------PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (390)
Q Consensus 192 ~l~~lds~~~~~~~----~~---------~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (390)
.+.+||+..|..+. +. .....+.+.|.+||++.|... +..|.|+..-.|+.....
T Consensus 303 ~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S------------katWnVia~q~~~~~~~~ 370 (522)
T COG3540 303 DLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS------------KATWNVIAQQMPLGLVVF 370 (522)
T ss_pred ceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc------------chhhhhhhhhcceeEeec
Confidence 79999997775221 11 123448899999999998764 445666666666633110
Q ss_pred ccCCCcccc--cCCCCCCCCCChHHHHHHHHcCCee--EEEeccCCCCCcccccC----------CeEEEecCCCCCCCC
Q 016429 259 FDQSNFTGV--RQEGISSASVNSGFFTTMVAAGDVK--AVFTGHDHVNDFCGRLT----------GIQLCYGGGFGYHAY 324 (390)
Q Consensus 259 ~~~~~~~g~--~~e~~~~~~~~~~~~~~l~~~~~v~--~v~~GH~H~~~~~~~~~----------gi~~~~~~~~g~~~~ 324 (390)
.......+. +..+..-.....+.+..++...++. ++|.|.+|. .+...+. -.+-..+++...+++
T Consensus 371 d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~-~wA~~l~~d~a~~~~~~~f~Efv~tsi~sG~~ 449 (522)
T COG3540 371 DGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY-SWAHDLDPDFAQFEDFAPFWEFVSTSINSGGF 449 (522)
T ss_pred CCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH-HHHhhcCcchhcccccCceeeEeeccCcCCCc
Confidence 000000000 0011111112344455555544454 999999998 3433321 124444555566666
Q ss_pred CC
Q 016429 325 GK 326 (390)
Q Consensus 325 ~~ 326 (390)
|+
T Consensus 450 gp 451 (522)
T COG3540 450 GP 451 (522)
T ss_pred CC
Confidence 65
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.3e-06 Score=76.04 Aligned_cols=67 Identities=21% Similarity=0.222 Sum_probs=42.2
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
|++++|||+|-. ...++.+.+.+. ..++|.++++||+|... ++..+.+. .+. +
T Consensus 1 M~~~vIGDIHG~--------------------~~~l~~ll~~~~~~~~~D~li~lGDlVdrG--p~s~~vl~-~l~---~ 54 (275)
T PRK00166 1 MATYAIGDIQGC--------------------YDELQRLLEKIDFDPAKDTLWLVGDLVNRG--PDSLEVLR-FVK---S 54 (275)
T ss_pred CcEEEEEccCCC--------------------HHHHHHHHHhcCCCCCCCEEEEeCCccCCC--cCHHHHHH-HHH---h
Confidence 679999999932 222333333332 24689999999966544 23333332 222 3
Q ss_pred CCCCEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQ 136 (390)
Q Consensus 123 ~~ip~~~v~GNHD~ 136 (390)
.+.++++|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (275)
T PRK00166 55 LGDSAVTVLGNHDL 68 (275)
T ss_pred cCCCeEEEecChhH
Confidence 46689999999997
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.3e-06 Score=69.30 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCChh---hHH---HHHHHHHhHhH---------------hCCCCEEEEeCCCCCCC
Q 016429 80 AFINRMISAEKPDLIVFTGDNIFGFDAT---DAA---KSLNAAFAPAI---------------ASNIPWVAVLGNHDQES 138 (390)
Q Consensus 80 ~~l~~~i~~~~pD~Vv~~GD~i~~~~~~---~~~---~~~~~~l~~~~---------------~~~ip~~~v~GNHD~~~ 138 (390)
..+..+....+||.|++.||++ +.+.. +.. ..+.+++..-. ..++|++.|+||||...
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLf-d~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLF-SSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHHhcCCCEEEEecccc-CCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 4444555568999999999955 44321 111 22222221100 01489999999999854
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.6e-05 Score=69.56 Aligned_cols=48 Identities=19% Similarity=0.018 Sum_probs=29.2
Q ss_pred cCCCEEEEcCCcCCCCChh-hHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 89 EKPDLIVFTGDNIFGFDAT-DAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 89 ~~pD~Vv~~GD~i~~~~~~-~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
.+.|.+|++||++.....+ +..+.+.+......+.+.++++++||||.
T Consensus 31 ~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~ 79 (208)
T cd07425 31 GGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHEL 79 (208)
T ss_pred CCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcH
Confidence 3689999999955443322 11222222222223357889999999997
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00071 Score=61.05 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=44.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHH-HHHHHHHHhcCCCEEEEcCCcCCCC-ChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT-AFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~pD~Vv~~GD~i~~~-~~~~~~~~~~~~l~~~~ 121 (390)
|||+++.|+=-..+ ...+ +.+.++.++.++||+|..||...+. +.+ .+..+.+.
T Consensus 1 m~ilfiGDi~G~~G------------------r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~------~~~~~~L~ 56 (266)
T TIGR00282 1 IKFLFIGDVYGKAG------------------RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLT------LKIYEFLK 56 (266)
T ss_pred CeEEEEEecCCHHH------------------HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCC------HHHHHHHH
Confidence 68999999872211 2222 3344444456899999999966543 221 12223344
Q ss_pred hCCCCEEEEeCCCCCCCC
Q 016429 122 ASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~ 139 (390)
+.++.++.+ |||.+...
T Consensus 57 ~~GvDviT~-GNH~~Dkg 73 (266)
T TIGR00282 57 QSGVNYITM-GNHTWFQK 73 (266)
T ss_pred hcCCCEEEc-cchhccCc
Confidence 578998877 99999655
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.7e-05 Score=69.49 Aligned_cols=64 Identities=22% Similarity=0.153 Sum_probs=38.8
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
||+++||+|-. ...++.+.+.+.. .++|.|+++||++..... ..+.+ +.+. .
T Consensus 2 ri~~isDiHg~--------------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~--~~~~~-~~l~---~- 54 (207)
T cd07424 2 RDFVVGDIHGH--------------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPE--SLACL-ELLL---E- 54 (207)
T ss_pred CEEEEECCCCC--------------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCC--HHHHH-HHHh---c-
Confidence 68999999921 1223333333332 468999999996543322 22222 2222 2
Q ss_pred CCCEEEEeCCCCC
Q 016429 124 NIPWVAVLGNHDQ 136 (390)
Q Consensus 124 ~ip~~~v~GNHD~ 136 (390)
.++++|.||||.
T Consensus 55 -~~~~~v~GNhe~ 66 (207)
T cd07424 55 -PWFHAVRGNHEQ 66 (207)
T ss_pred -CCEEEeECCChH
Confidence 368999999996
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.3e-05 Score=68.33 Aligned_cols=42 Identities=29% Similarity=0.285 Sum_probs=26.6
Q ss_pred CCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 91 PDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 91 pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
.|.+|++||+|.... +..+.+ +.+..+.. .-.++++.||||.
T Consensus 38 ~d~lv~lGDlIDrG~--~s~evl-~~l~~l~~-~~~~~~v~GNHE~ 79 (234)
T cd07423 38 GRRAVFVGDLVDRGP--DSPEVL-RLVMSMVA-AGAALCVPGNHDN 79 (234)
T ss_pred CCEEEEECCccCCCC--CHHHHH-HHHHHHhh-CCcEEEEECCcHH
Confidence 689999999666443 233333 23333322 2368899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00014 Score=64.24 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhh-hccC---CCc--ccccCCCCCCCCCChHHHHHHHHcCC
Q 016429 217 QQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFA-YFDQ---SNF--TGVRQEGISSASVNSGFFTTMVAAGD 290 (390)
Q Consensus 217 q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~-~~~~---~~~--~g~~~e~~~~~~~~~~~~~~l~~~~~ 290 (390)
.+-|++..|....+ .+.|+++|.|.-...+. ..|. +++ .|..... -.+..+.+.+...++.+|
T Consensus 254 slpwlk~dl~~~aa----------dgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaph-ww~a~er~all~~lqGYN 322 (392)
T COG5555 254 SLPWLKVDLIYSAA----------DGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPH-WWPAPERGALLFFLQGYN 322 (392)
T ss_pred cCcceeccceeecc----------CCCceeehhhhCccceeccccCchhcccccCCCCCCC-CCCCCCcchHHHhhcCce
Confidence 36688877664332 67899999998543321 1221 111 1221111 123344555666677789
Q ss_pred eeEEEeccCCCC
Q 016429 291 VKAVFTGHDHVN 302 (390)
Q Consensus 291 v~~v~~GH~H~~ 302 (390)
|..+++||.|.-
T Consensus 323 vvg~fhGhkhd~ 334 (392)
T COG5555 323 VVGTFHGHKHDF 334 (392)
T ss_pred eEEecccccccc
Confidence 999999999974
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.7e-05 Score=66.29 Aligned_cols=71 Identities=24% Similarity=0.142 Sum_probs=42.6
Q ss_pred ccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCChhhHHHHHHHH
Q 016429 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAA 116 (390)
Q Consensus 38 ~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~~~~~~~~~~~ 116 (390)
++.+.--||.+|||+|-. ...++.+.+.+.. .+.|.++++||+|...+ +..+.+. .
T Consensus 11 ~~~~~~~ri~vigDIHG~--------------------~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp--~s~~vl~-~ 67 (218)
T PRK11439 11 IAGHQWRHIWLVGDIHGC--------------------FEQLMRKLRHCRFDPWRDLLISVGDLIDRGP--QSLRCLQ-L 67 (218)
T ss_pred ccCCCCCeEEEEEcccCC--------------------HHHHHHHHHhcCCCcccCEEEEcCcccCCCc--CHHHHHH-H
Confidence 344444589999999942 2233434444432 26799999999665443 3333332 2
Q ss_pred HhHhHhCCCCEEEEeCCCCC
Q 016429 117 FAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 117 l~~~~~~~ip~~~v~GNHD~ 136 (390)
+. + ..+++|.||||.
T Consensus 68 l~---~--~~~~~v~GNHE~ 82 (218)
T PRK11439 68 LE---E--HWVRAVRGNHEQ 82 (218)
T ss_pred HH---c--CCceEeeCchHH
Confidence 22 2 246789999996
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00011 Score=64.79 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=41.9
Q ss_pred ccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCcCCCCChhhHHHHHHHH
Q 016429 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAA 116 (390)
Q Consensus 38 ~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~ 116 (390)
++.+..=||++|||+|-. ...++.+.+.+. ..+.|.+++.||+|..... ..+.+. .
T Consensus 9 ~~~~~~~ri~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~--~~~~l~-~ 65 (218)
T PRK09968 9 INAHHYRHIWVVGDIHGE--------------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPE--SLNVLR-L 65 (218)
T ss_pred ccCCCCCeEEEEEeccCC--------------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcC--HHHHHH-H
Confidence 333443499999999932 222333333333 2468999999996554332 222332 2
Q ss_pred HhHhHhCCCCEEEEeCCCCC
Q 016429 117 FAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 117 l~~~~~~~ip~~~v~GNHD~ 136 (390)
+. + -.+++|.||||.
T Consensus 66 l~---~--~~~~~v~GNHE~ 80 (218)
T PRK09968 66 LN---Q--PWFISVKGNHEA 80 (218)
T ss_pred Hh---h--CCcEEEECchHH
Confidence 22 1 247899999996
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0001 Score=66.45 Aligned_cols=42 Identities=26% Similarity=0.254 Sum_probs=28.0
Q ss_pred cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 89 ~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
.+.|.++++||+|...+ +..+.+. .+. +.+..+.+|.||||.
T Consensus 25 ~~~D~Li~lGDlVdRGp--~s~evl~-~l~---~l~~~v~~VlGNHD~ 66 (257)
T cd07422 25 PAKDRLWLVGDLVNRGP--DSLETLR-FVK---SLGDSAKTVLGNHDL 66 (257)
T ss_pred CCCCEEEEecCcCCCCc--CHHHHHH-HHH---hcCCCeEEEcCCchH
Confidence 36799999999665443 3333332 332 344578999999997
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00015 Score=65.08 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=53.6
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-----------cCCCEEEEcCCcCCCCCh-------
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-----------EKPDLIVFTGDNIFGFDA------- 106 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-----------~~pD~Vv~~GD~i~~~~~------- 106 (390)
+|+++||+|++.... ....++.|.+.|.. .+...+|++||.|.+.+.
T Consensus 1 ~i~~vSgL~ig~~~~---------------~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~ 65 (257)
T cd07387 1 YIALVSGLGLGGNAE---------------SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTK 65 (257)
T ss_pred CEEEEcccccCCCcc---------------chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhh
Confidence 479999999997632 23345677777763 234579999997775432
Q ss_pred ------------hhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCCC
Q 016429 107 ------------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 107 ------------~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~ 139 (390)
.+.++.++.++..+. ..+|+.++|||||....
T Consensus 66 ~~~~~~~~~~~~~~~~~~ld~~l~~l~-~~i~V~imPG~~Dp~~~ 109 (257)
T cd07387 66 ARYLTKKSSAASVEAVKELDNFLSQLA-SSVPVDLMPGEFDPANH 109 (257)
T ss_pred hhccccccchhhHHHHHHHHHHHHhhh-cCCeEEECCCCCCcccc
Confidence 122445555565543 57999999999998653
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00018 Score=65.07 Aligned_cols=67 Identities=19% Similarity=0.191 Sum_probs=40.9
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-hcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-AEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
|++.+|+|+|-. ...++.+.+.++ ....|-++++||+|...+ +..+.+. .+..
T Consensus 1 m~~YvIGDIHGc--------------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP--~slevL~-~l~~--- 54 (279)
T TIGR00668 1 MATYLIGDLHGC--------------------YDELQALLERVEFDPGQDTLWLTGDLVARGP--GSLEVLR-YVKS--- 54 (279)
T ss_pred CcEEEEEcccCC--------------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCC--CHHHHHH-HHHh---
Confidence 467899999932 223344444443 235699999999665443 3333332 3332
Q ss_pred CCCCEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQ 136 (390)
Q Consensus 123 ~~ip~~~v~GNHD~ 136 (390)
.+..+.+|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 55 LGDAVRLVLGNHDL 68 (279)
T ss_pred cCCCeEEEEChhHH
Confidence 34457799999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00096 Score=65.17 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=49.1
Q ss_pred ceeccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHhcCCCE-EEEcCCcCCCCC-hhhH--
Q 016429 35 KLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISAEKPDL-IVFTGDNIFGFD-ATDA-- 109 (390)
Q Consensus 35 ~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~pD~-Vv~~GD~i~~~~-~~~~-- 109 (390)
.++-...+..+|.|.||+|-......+ + .....+..+ ......+.+..+...+|+ ++-+|| ..+.. .-+.
T Consensus 34 ii~~~~~~~~nf~hTtdthG~~~~h~~--~--~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD-~hdGtg~sd~~~ 108 (602)
T KOG4419|consen 34 IIRHLNWGQPNFIHTTDTHGWLGSHLR--D--ARYDADFGDFAAFALRMKELADRKGVDVLLVDTGD-LHDGTGLSDATD 108 (602)
T ss_pred heeccccccccceeecccccccccccc--c--hhhhhhhhhHHHHHHHHHHHHhccCCCEEEEeccc-ccCCceeeeccC
Confidence 344455788999999999977542110 0 000011122 223344555555566775 556799 55442 1111
Q ss_pred -HHHHHHHHhHhHhCCCC-EEEEeCCCCCCCC
Q 016429 110 -AKSLNAAFAPAIASNIP-WVAVLGNHDQEST 139 (390)
Q Consensus 110 -~~~~~~~l~~~~~~~ip-~~~v~GNHD~~~~ 139 (390)
.-...+.+..+ .| =..+.|||+++..
T Consensus 109 ~~g~~t~~l~~~----~~yD~l~lGNHEl~~~ 136 (602)
T KOG4419|consen 109 PPGIYTNFLFKM----MPYDILTLGNHELYQA 136 (602)
T ss_pred CchHHHHHHHhc----Cccchhhhcchhhhhh
Confidence 11222333333 23 2456799998764
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00022 Score=64.17 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=26.6
Q ss_pred CCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 91 PDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 91 pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
-|.+|++||+|... ++..+.+.. +..+. ..-+++++.||||.
T Consensus 37 ~d~li~lGDliDRG--p~S~~vl~~-~~~~~-~~~~~~~l~GNHE~ 78 (245)
T PRK13625 37 QRKLAFVGDLTDRG--PHSLRMIEI-VWELV-EKKAAYYVPGNHCN 78 (245)
T ss_pred CCEEEEECcccCCC--cChHHHHHH-HHHHh-hCCCEEEEeCccHH
Confidence 47999999966543 333434432 22232 23479999999985
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00039 Score=63.07 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=40.5
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh------cCCCEEEEcCCcCCCCChhhHHHHHHHHHh
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA------EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~------~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~ 118 (390)
++++|+|+|-. ...++.+.+.+.. ...+.+|++||+|.... +..+.+. .+.
T Consensus 3 ~iyaIGDIHG~--------------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP--dS~eVld-~L~ 59 (304)
T cd07421 3 VVICVGDIHGY--------------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP--ETRKVID-FLI 59 (304)
T ss_pred eEEEEEeccCC--------------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC--CHHHHHH-HHH
Confidence 68999999932 2344444444432 23578999999665443 2332332 222
Q ss_pred HhHhC--CCCEEEEeCCCCC
Q 016429 119 PAIAS--NIPWVAVLGNHDQ 136 (390)
Q Consensus 119 ~~~~~--~ip~~~v~GNHD~ 136 (390)
.+... ...++++.||||.
T Consensus 60 ~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 60 SLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred HhhhcccccceEEEecCChH
Confidence 22222 2258899999996
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00025 Score=62.82 Aligned_cols=43 Identities=26% Similarity=0.267 Sum_probs=27.4
Q ss_pred CCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 90 KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 90 ~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
..|.+|++||+|...+ +..+.+. .+..+.+ .-.++++.||||.
T Consensus 33 ~~d~lvflGD~IDRGp--~S~~vl~-~l~~l~~-~~~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLIDRGP--EIRELLE-IVKSMVD-AGHALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCcccCCCC--CHHHHHH-HHHHhhc-CCCEEEEEccCcH
Confidence 4689999999665443 3333443 3333322 2378999999996
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00021 Score=63.44 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 80 ~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
..+.+.+...++|.+|++||++.... ...+.+. .+..+...+.+++++.||||.
T Consensus 14 ~~~l~~~~~~~~d~li~lGD~vdrg~--~~~~~l~-~l~~~~~~~~~~~~l~GNHe~ 67 (225)
T cd00144 14 LRLLEKIGFPPNDKLIFLGDYVDRGP--DSVEVID-LLLALKILPDNVILLRGNHED 67 (225)
T ss_pred HHHHHHhCCCCCCEEEEECCEeCCCC--CcHHHHH-HHHHhcCCCCcEEEEccCchh
Confidence 34444444457899999999665432 2222332 222221114589999999997
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.018 Score=51.66 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCCh-HHHHHHHHcCCeeEEEe
Q 016429 218 QFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNS-GFFTTMVAAGDVKAVFT 296 (390)
Q Consensus 218 ~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~-~~~~~l~~~~~v~~v~~ 296 (390)
.+-+++.++++++ ....+|++.|...... ..|.... ++-..+++. ++++|+.
T Consensus 161 ~~~~~~~i~~lr~----------~~D~vIv~~H~G~e~~----------------~~p~~~~~~la~~l~~~-G~D~IiG 213 (239)
T cd07381 161 LERIAADIAEAKK----------KADIVIVSLHWGVEYS----------------YYPTPEQRELARALIDA-GADLVIG 213 (239)
T ss_pred HHHHHHHHHHHhh----------cCCEEEEEecCcccCC----------------CCCCHHHHHHHHHHHHC-CCCEEEc
Confidence 3446666666653 4667899999654110 0111112 233344454 5999999
Q ss_pred ccCCCCCcccccCCeEEEec
Q 016429 297 GHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 297 GH~H~~~~~~~~~gi~~~~~ 316 (390)
||.|....+-.++|..++|+
T Consensus 214 ~H~Hv~q~~E~~~~~~I~YS 233 (239)
T cd07381 214 HHPHVLQGIEIYKGKLIFYS 233 (239)
T ss_pred CCCCcCCCeEEECCEEEEEc
Confidence 99999655555777777765
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00054 Score=65.44 Aligned_cols=82 Identities=15% Similarity=0.216 Sum_probs=52.0
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-----hcCCCEEEEcCCcCCCCCh---------
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-----AEKPDLIVFTGDNIFGFDA--------- 106 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-----~~~pD~Vv~~GD~i~~~~~--------- 106 (390)
+..++++++||+|.|...- -.+....+.+.++ +.+..+++++||++.+-+-
T Consensus 223 ~e~v~v~~isDih~GSk~F---------------~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~ 287 (481)
T COG1311 223 DERVYVALISDIHRGSKEF---------------LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELV 287 (481)
T ss_pred CcceEEEEEeeeecccHHH---------------HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccc
Confidence 4668999999999986431 1112233333333 2356799999997765531
Q ss_pred ----hhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCC
Q 016429 107 ----TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (390)
Q Consensus 107 ----~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~ 138 (390)
.+.++.+++.|... -..+.+++.|||||...
T Consensus 288 i~di~~qy~~~A~~L~~v-p~~I~v~i~PGnhDa~r 322 (481)
T COG1311 288 IADIYEQYEELAEFLDQV-PEHIKVFIMPGNHDAVR 322 (481)
T ss_pred cccchHHHHHHHHHHhhC-CCCceEEEecCCCCccc
Confidence 12455555555532 24677999999999854
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.022 Score=50.52 Aligned_cols=53 Identities=23% Similarity=0.424 Sum_probs=35.3
Q ss_pred HhcCCCEEEEcCCcCCCCCh------------------hhHHHHH----HH-----HHhHhHhCCCCEEEEeCCCCCCCC
Q 016429 87 SAEKPDLIVFTGDNIFGFDA------------------TDAAKSL----NA-----AFAPAIASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 87 ~~~~pD~Vv~~GD~i~~~~~------------------~~~~~~~----~~-----~l~~~~~~~ip~~~v~GNHD~~~~ 139 (390)
.+.+||++|++||.|+.+.. ....+.+ .. .++.+ ...+|++.++.+||+..+
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~-~~~~p~~~iwDDHDi~~n 104 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRL-LAQVPTIGIWDDHDIGDN 104 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHH-hhcCCEEEeccccccccc
Confidence 46899999999999998842 1111111 11 12222 257899999999999865
Q ss_pred C
Q 016429 140 L 140 (390)
Q Consensus 140 ~ 140 (390)
.
T Consensus 105 ~ 105 (228)
T cd07389 105 W 105 (228)
T ss_pred c
Confidence 3
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.015 Score=52.05 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=37.1
Q ss_pred CCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC-hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEec
Q 016429 241 APAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN-SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 241 ~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~-~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (390)
+...+|++.|...... ..|... .++-..+++. ++++|+.||.|.......++|..+.|+
T Consensus 172 ~~D~vIv~~H~G~e~~----------------~~p~~~~~~~A~~l~~~-G~DvIiG~H~H~~~~~e~~~~~~I~Ys 231 (239)
T smart00854 172 KADVVIVSLHWGVEYQ----------------YEPTDEQRELAHALIDA-GADVVIGHHPHVLQPIEIYKGKLIAYS 231 (239)
T ss_pred cCCEEEEEecCccccC----------------CCCCHHHHHHHHHHHHc-CCCEEEcCCCCcCCceEEECCEEEEEc
Confidence 4567999999765210 011111 2344555554 599999999999665556677777665
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0027 Score=60.07 Aligned_cols=24 Identities=8% Similarity=0.216 Sum_probs=21.3
Q ss_pred CCChHHHHHHHHcCCeeEEEeccC
Q 016429 276 SVNSGFFTTMVAAGDVKAVFTGHD 299 (390)
Q Consensus 276 ~~~~~~~~~l~~~~~v~~v~~GH~ 299 (390)
..+...++.+++..++++++=||.
T Consensus 270 ~FG~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 270 LWGPDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCC
Confidence 356788899999999999999999
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0054 Score=53.71 Aligned_cols=75 Identities=19% Similarity=0.213 Sum_probs=41.9
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH----hcCCCEEEEcCCcCCCCChhh----------H-H
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS----AEKPDLIVFTGDNIFGFDATD----------A-A 110 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~----~~~pD~Vv~~GD~i~~~~~~~----------~-~ 110 (390)
|+++||+|++... ..++.+.+.+. +.+|+.+|++|+++....... . .
T Consensus 1 Iv~~Sg~~~~~~~------------------~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~ 62 (209)
T PF04042_consen 1 IVFASGPFLDSDN------------------LSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEE 62 (209)
T ss_dssp EEEEES--CTTT-------------------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHH
T ss_pred CEEEecCccCCCH------------------hHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccH
Confidence 6899999988532 23455555554 567999999999776543211 1 1
Q ss_pred HH---HHHHHhHhHhCCCCEEEEeCCCCCCCC
Q 016429 111 KS---LNAAFAPAIASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 111 ~~---~~~~l~~~~~~~ip~~~v~GNHD~~~~ 139 (390)
.. +.+.+..+ ...+++++|||+||....
T Consensus 63 ~~~~~~~~~~~~i-~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 63 DFLKELDSFLESI-LPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHHCHHHHCCC-HCCSEEEEE--TTCTT-S
T ss_pred HHHHHHHHHHhhc-ccccEEEEeCCCcccccc
Confidence 11 12222222 257899999999998654
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.013 Score=53.39 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=21.1
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~ 301 (390)
.+......++++.++++++-||.=.
T Consensus 198 fg~~~~~~Fl~~n~l~~iiR~He~~ 222 (271)
T smart00156 198 FGPDAVDEFLKKNNLKLIIRAHQVV 222 (271)
T ss_pred cCHHHHHHHHHHCCCeEEEecCccc
Confidence 3567788999999999999999744
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.077 Score=47.22 Aligned_cols=69 Identities=17% Similarity=0.257 Sum_probs=43.4
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
-+..|++-|||+|--... +. +-..-|+++++|| .+.-+..++...+.+.+-.
T Consensus 59 ~~~~r~VcisdtH~~~~~-----------------------i~---~~p~gDvlihagd-fT~~g~~~ev~~fn~~~gs- 110 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFD-----------------------IN---DIPDGDVLIHAGD-FTNLGLPEEVIKFNEWLGS- 110 (305)
T ss_pred CCceEEEEecCcccccCc-----------------------cc---cCCCCceEEeccC-CccccCHHHHHhhhHHhcc-
Confidence 466999999999943211 11 2356699999999 6665555544444443332
Q ss_pred HhCCC-CEEEEeCCCCCCCC
Q 016429 121 IASNI-PWVAVLGNHDQEST 139 (390)
Q Consensus 121 ~~~~i-p~~~v~GNHD~~~~ 139 (390)
+.- --++|.|||+....
T Consensus 111 --lph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 111 --LPHEYKIVIAGNHELTFD 128 (305)
T ss_pred --CcceeeEEEeeccceeec
Confidence 222 24678999998654
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.29 Score=43.53 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=76.3
Q ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCcccc
Q 016429 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQV 159 (390)
Q Consensus 80 ~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 159 (390)
+.|.++.++.++||||..|...++... -..+.+.+.+ +.++.++ +.|||=+.. .++.+++.+.+.- .
T Consensus 17 ~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~----~~GvDvi-T~GNH~wdk----kei~~~i~~~~~i---l 83 (253)
T PF13277_consen 17 EHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF----KAGVDVI-TMGNHIWDK----KEIFDFIDKEPRI---L 83 (253)
T ss_dssp HHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH----HHT-SEE-E--TTTTSS----TTHHHHHHH-SSE---E
T ss_pred HHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH----hcCCCEE-ecCcccccC----cHHHHHHhcCCCc---E
Confidence 445555556799999999997665532 1222333333 3577764 789997743 3455666654432 2
Q ss_pred CCCCC-ccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcc
Q 016429 160 NPSDA-HIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAA 238 (390)
Q Consensus 160 ~p~~~-~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~ 238 (390)
.|.+. ....|.|+..+...+ ..+-++|-..-.-. ..++ .-..-+++.+++++.
T Consensus 84 RPaN~p~~~pG~G~~i~~~~g-----------~kv~ViNl~Gr~fm------~~~~-~PF~~~d~~l~~l~~-------- 137 (253)
T PF13277_consen 84 RPANYPPGTPGRGYRIFEKNG-----------KKVAVINLMGRVFM------PPID-CPFRAADRLLEELKE-------- 137 (253)
T ss_dssp --TTS-TT-SSBSEEEEEETT-----------EEEEEEEEE--TTS---------S--HHHHHHHHHHH-----------
T ss_pred ECCCCCCCCCcCcEEEEEECC-----------EEEEEEECcccccC------CCCC-ChHHHHHHHHHhccc--------
Confidence 23321 125566777777654 34444443211111 1122 335556666666532
Q ss_pred cCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcc
Q 016429 239 QKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFC 305 (390)
Q Consensus 239 ~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~ 305 (390)
....+||=+|---..- ..--.+.-.+.|.+|+.=|+|.+-..
T Consensus 138 --~~~~iiVDFHAEaTSE-----------------------K~A~g~~lDGrvsaV~GTHTHVqTaD 179 (253)
T PF13277_consen 138 --ETDIIIVDFHAEATSE-----------------------KQAMGWYLDGRVSAVVGTHTHVQTAD 179 (253)
T ss_dssp ----SEEEEEEE-S-HHH-----------------------HHHHHHHHBTTBSEEEEESSSS-BS-
T ss_pred --cCCEEEEEeecCcHHH-----------------------HHHHHHHhCCcEEEEEeCCCCccCch
Confidence 4566777788532110 11123344568999999999986433
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.021 Score=53.02 Aligned_cols=25 Identities=4% Similarity=0.150 Sum_probs=21.4
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~ 301 (390)
.+....+.+++..++++++=||.=.
T Consensus 220 fG~~~~~~Fl~~n~l~~iiR~He~~ 244 (305)
T cd07416 220 YSYRAVCEFLQKNNLLSIIRAHEAQ 244 (305)
T ss_pred cCHHHHHHHHHHcCCeEEEEecccc
Confidence 4567789999999999999999865
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.036 Score=51.59 Aligned_cols=26 Identities=4% Similarity=0.124 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHcCCeeEEEeccCCC
Q 016429 276 SVNSGFFTTMVAAGDVKAVFTGHDHV 301 (390)
Q Consensus 276 ~~~~~~~~~l~~~~~v~~v~~GH~H~ 301 (390)
..+......+++..++++++=||.=.
T Consensus 250 ~FG~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 250 YFGPDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhh
Confidence 35667889999999999999999865
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.078 Score=48.08 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=50.3
Q ss_pred cCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--------CCCEEEEcCCcCCCC-----C
Q 016429 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--------KPDLIVFTGDNIFGF-----D 105 (390)
Q Consensus 39 ~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--------~pD~Vv~~GD~i~~~-----~ 105 (390)
+++...+|+++||+|++.. .+++.|..++... .|-.+|+.|+.+..- .
T Consensus 23 ~~~~~~~~VilSDV~LD~p-------------------~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~ 83 (291)
T PTZ00235 23 KNDKRHNWIIMHDVYLDSP-------------------YTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRN 83 (291)
T ss_pred cCCCceEEEEEEeeccCCH-------------------HHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCC
Confidence 4567799999999999753 4556666665532 388999999955432 1
Q ss_pred hhhHH-HHHHHH----HhH--hHhCCCCEEEEeCCCCCCC
Q 016429 106 ATDAA-KSLNAA----FAP--AIASNIPWVAVLGNHDQES 138 (390)
Q Consensus 106 ~~~~~-~~~~~~----l~~--~~~~~ip~~~v~GNHD~~~ 138 (390)
....+ +.+++. ++. .+.....+++|||-.|-+.
T Consensus 84 ~~~~yk~~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 84 FHKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred chHHHHHHHHHHHHHHHHhChHHHhcCeEEEECCCCCCCc
Confidence 11122 222221 211 1235677999999999854
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.03 Score=51.58 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=35.2
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCccc-ccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCG-RLTGIQLCYGGGFGYHA-YGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~~ 340 (390)
.+...++++++..++++++=||.=..+-.. ..++--+..-+++.|.+ .+ ..+-++.|+.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~-----N~~a~l~i~~ 280 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFD-----NAGAMMSVDE 280 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCC-----ceEEEEEECC
Confidence 466788999999999999999996633222 22332222223444533 22 3456777764
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.037 Score=50.81 Aligned_cols=60 Identities=7% Similarity=-0.036 Sum_probs=35.1
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCcc-cccCCeEEEecCCCCCCCCCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFC-GRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~-~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~ 340 (390)
.+...++.+++..++++++=||.-..+-. ...+|--+..-+++.|.+. ....+-++.|+.
T Consensus 212 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~----~~n~~a~l~i~~ 272 (285)
T cd07415 212 FGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYR----CGNVASIMELDE 272 (285)
T ss_pred cCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCC----CCceEEEEEECC
Confidence 46678899999999999999999653322 2233422222233444321 123456777763
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.13 Score=47.50 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=22.6
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCccc
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCG 306 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~ 306 (390)
.++..++.|++.-+..++|+.|.|. .|..
T Consensus 205 LGSp~~~eLL~~LkP~yWfsAHLH~-KFaA 233 (456)
T KOG2863|consen 205 LGSPALEELLEDLKPQYWFSAHLHV-KFAA 233 (456)
T ss_pred cCChHHHHHHHHhCcchhhhhhHhh-HHhh
Confidence 4566677888877889999999998 5544
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.038 Score=51.37 Aligned_cols=26 Identities=8% Similarity=0.236 Sum_probs=22.4
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVN 302 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~ 302 (390)
.+...++.+++..++++++=||.-..
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v~ 254 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVVE 254 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCcccc
Confidence 46688899999999999999998663
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.78 Score=41.33 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCC-ChHHHHHHHHcCCeeEE
Q 016429 216 SQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV-NSGFFTTMVAAGDVKAV 294 (390)
Q Consensus 216 ~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~-~~~~~~~l~~~~~v~~v 294 (390)
.+++.+.+.++++++ +...+|++.|.-..- ...|.. ..++-..+++.+ +++|
T Consensus 168 ~~~~~i~~~i~~~r~----------~~D~vIv~~HwG~e~----------------~~~p~~~q~~~a~~lidaG-aDiI 220 (250)
T PF09587_consen 168 PGIERIKEDIREARK----------KADVVIVSLHWGIEY----------------ENYPTPEQRELARALIDAG-ADII 220 (250)
T ss_pred chHHHHHHHHHHHhc----------CCCEEEEEeccCCCC----------------CCCCCHHHHHHHHHHHHcC-CCEE
Confidence 345778887777763 577899999974311 001111 225566777765 9999
Q ss_pred EeccCCCCCcccccCCeEEEec
Q 016429 295 FTGHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 295 ~~GH~H~~~~~~~~~gi~~~~~ 316 (390)
+.+|-|.-...-.+++..+.|+
T Consensus 221 iG~HpHv~q~~E~y~~~~I~YS 242 (250)
T PF09587_consen 221 IGHHPHVIQPVEIYKGKPIFYS 242 (250)
T ss_pred EeCCCCcccceEEECCEEEEEe
Confidence 9999999766666777777765
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.071 Score=49.31 Aligned_cols=26 Identities=12% Similarity=0.166 Sum_probs=22.3
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVN 302 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~ 302 (390)
.+...++.+++..++++++=||.-..
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~~ 238 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLVM 238 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhhc
Confidence 46678899999999999999998663
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.057 Score=49.76 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=35.1
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCccc-ccCCeEEEecCCCCCCCCCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCG-RLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~ 340 (390)
.+...++.+++..++++++=||.-..+-.. ..++--+..-+++.|.+.. ....-++.|+.
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~----~N~~a~l~i~~ 282 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEF----DNDAAVMNIDD 282 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCC----CceEEEEEECC
Confidence 466788999999999999999996633222 2233222222334443211 23456777763
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.1 Score=48.66 Aligned_cols=59 Identities=7% Similarity=0.092 Sum_probs=35.6
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCc-ccccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDF-CGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~-~~~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~~ 340 (390)
.+...+..+++..++++++-||.=..+- ....+|.-+..-+++.|.+ +++ ..-++.|+.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N-----~ga~~~i~~ 291 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGN-----KGAFIRITG 291 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCc-----ceEEEEEeC
Confidence 4567888999999999999999965322 2223443222223444532 332 355777763
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.48 Score=41.65 Aligned_cols=106 Identities=20% Similarity=0.305 Sum_probs=60.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++.|+=-..+. ....+.|..+..+.++|||++.|-..++.-. -.++.+...+ +.
T Consensus 1 mriLfiGDvvGk~Gr-----------------~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~G-it~k~y~~l~----~~ 58 (266)
T COG1692 1 MRILFIGDVVGKPGR-----------------KAVKEHLPQLKSKYKIDFVIVNGENAAGGFG-ITEKIYKELL----EA 58 (266)
T ss_pred CeEEEEecccCcchH-----------------HHHHHHhHHHHHhhcCcEEEEcCccccCCcC-CCHHHHHHHH----Hh
Confidence 689999998644321 1122445555556899999999996665532 2222333333 35
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCC-CccccCccceeEEecc
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSD-AHIIDGFGNYNLEIGG 179 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~g~~~y~~~~~~ 179 (390)
++.+ ++.|||=.. ..++.+++.+.++- ..|.+ .....|.|+..+...+
T Consensus 59 G~dv-iT~GNH~wd----~~ei~~~i~~~~~i---lRP~N~p~~~~G~G~~~f~~ng 107 (266)
T COG1692 59 GADV-ITLGNHTWD----QKEILDFIDNADRI---LRPANYPDGTPGKGSRIFKING 107 (266)
T ss_pred CCCE-Eeccccccc----chHHHHHhhcccce---eccCCCCCCCCcceEEEEEeCC
Confidence 7765 578999763 33555665543332 22222 1125566766666655
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.1 Score=42.92 Aligned_cols=44 Identities=30% Similarity=0.334 Sum_probs=31.9
Q ss_pred cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCC
Q 016429 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (390)
Q Consensus 89 ~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD 135 (390)
.+.|++++.|| +.+....+ ..+.+.+....+..+|.|++-|||+
T Consensus 25 gpFd~~ic~Gd-ff~~~~~~--~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 25 GPFDALLCVGD-FFGDDEDD--EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CCeeEEEEecC-ccCCccch--hhHHHHhcCCccCCCCEEEECCCCC
Confidence 46799999999 55443322 3455555555568899999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.2 Score=46.75 Aligned_cols=59 Identities=12% Similarity=0.214 Sum_probs=35.3
Q ss_pred CChHHHHHHHHcCCeeEEEeccC-CCCCcccccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHD-HVNDFCGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~-H~~~~~~~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~~ 340 (390)
.+...++.+++..++++++=||. ...-+....+|--+..-+++.|.+ ++ ..+-++.|+.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~-----n~~ai~~i~~ 300 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAG-----NAGAILVLGR 300 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCC-----ceEEEEEECC
Confidence 46678899999999999999998 332333334442222223444532 23 3456777764
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.66 Score=37.39 Aligned_cols=72 Identities=18% Similarity=0.131 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCC---CCceeEEEEEecccccccCCCCcCceEE
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAG---WERRARVVVASLEKTEKRGWGDVKSIKT 356 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~---~~~g~rv~ei~~~~~~~~~~~~~~~~~t 356 (390)
+.+..|.+.-+|+..+.||+|.- ..+..+|--+ .++++.-++|+... ..+.|-+++|.. ....+
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f-~Aye~eg~ff-vnPGSaTGAfn~~~t~~~~PSFvLmDiqg-----------~~~v~ 163 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKF-EAYEHEGKFF-VNPGSATGAFNVSDTDIIVPSFVLMDIQG-----------STVVT 163 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeE-EEEEeCCcEE-eCCCcccCCCcccccCCCCCceEEEEecC-----------CEEEE
Confidence 55677777779999999999982 2334455444 45555555555422 457888888862 45677
Q ss_pred EE-EccCCC
Q 016429 357 WK-RLDDEH 364 (390)
Q Consensus 357 w~-r~~~~~ 364 (390)
|. |+-++.
T Consensus 164 YvY~lidge 172 (183)
T KOG3325|consen 164 YVYRLIDGE 172 (183)
T ss_pred EEeeeeCCc
Confidence 74 344554
|
|
| >KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=86.37 E-value=5 Score=38.47 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=49.7
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh---cCCCEEEEcCCcCCCCChhhHHHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA---EKPDLIVFTGDNIFGFDATDAAKSLNAAF 117 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l 117 (390)
..+-+|+++||+|++. ...++.+..++.. ..|-++|+.|-....-........+++-+
T Consensus 280 ~~d~~fVfLSdV~LD~-------------------~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f 340 (525)
T KOG3818|consen 280 NTDTSFVFLSDVFLDD-------------------KKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGF 340 (525)
T ss_pred CcCceEEEEehhcccc-------------------HHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHH
Confidence 4567789999999874 4455666666654 46789999999443322222222232222
Q ss_pred hHhH-------h--CCCCEEEEeCCCCCCCC
Q 016429 118 APAI-------A--SNIPWVAVLGNHDQEST 139 (390)
Q Consensus 118 ~~~~-------~--~~ip~~~v~GNHD~~~~ 139 (390)
..+. + .+..+++|||-.|-+..
T Consensus 341 ~~LA~~l~~~~~~~ekT~fIFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 341 RWLAAQLTCFRKDYEKTQFIFVPGPNDPWVD 371 (525)
T ss_pred HHHHhhccccccccccceEEEecCCCCCCcC
Confidence 2211 1 35679999999998753
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=81.13 E-value=2.7 Score=36.15 Aligned_cols=12 Identities=42% Similarity=0.706 Sum_probs=11.1
Q ss_pred CeeEEEeccCCC
Q 016429 290 DVKAVFTGHDHV 301 (390)
Q Consensus 290 ~v~~v~~GH~H~ 301 (390)
+++++||||+|.
T Consensus 144 ~~dl~lSGHtHg 155 (193)
T cd08164 144 KPGLILTGHDHE 155 (193)
T ss_pred CCCEEEeCccCC
Confidence 589999999998
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins | Back alignment and domain information |
|---|
Probab=80.13 E-value=0.72 Score=34.61 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=12.0
Q ss_pred eehHHHHHHHHHHhhccccccc
Q 016429 10 ALVIVAVLTLLCIAPTLAVNAK 31 (390)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~ 31 (390)
.|+|+|+|++++|+++.++|+.
T Consensus 6 ~llL~l~LA~lLlisSevaa~~ 27 (95)
T PF07172_consen 6 FLLLGLLLAALLLISSEVAARE 27 (95)
T ss_pred HHHHHHHHHHHHHHHhhhhhHH
Confidence 4455555556666665555543
|
Some of them may be involved in resistance to environmental stress []. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-22 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 4e-15 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 7e-13 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 3e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 3e-06 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 2e-05 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 6e-04 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 7e-04 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 8e-04 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 97.6 bits (242), Expect = 2e-22
Identities = 49/317 (15%), Positives = 103/317 (32%), Gaps = 44/317 (13%)
Query: 2 MVHRKKKPALVIVAVLTLLCIAPTLAVNAKQERKLRFRQNGEFKILQVADMHFA------ 55
M+ K +++++ + C + A ++ ++ ++ D+H+
Sbjct: 1 MIRFFKIVTPILLSISLVACSS---ASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTD 57
Query: 56 -NGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAA-KSL 113
+ + SD T AF+ + ++K D+++ +GD + + + L
Sbjct: 58 NGKAFEKYVAAGDGKQLAYSDEITDAFL-ADVESKKTDVLIISGDLT--NNGEKTSHEEL 114
Query: 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNY 173
+ V GNHD + +R+ + ++P+D I Y
Sbjct: 115 AKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDK----QLPTDTISPTDFSKIYSDFGY 170
Query: 174 NLEIGGVKGSG---FENKSVLNLYFLDSGDYSTVPSV---PGYGWIKPSQQFWFEQTSAR 227
I + S S + L LD+ Y T G + W +++SA
Sbjct: 171 EDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSAL 230
Query: 228 LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVA 287
A+K A + H L + N + I+ + +
Sbjct: 231 ----------AKKNGAKLIPVLHHNLTDH------NDVIQKGYTIN----YNQQVIDALT 270
Query: 288 AGDVKAVFTGHDHVNDF 304
G + +GH H +
Sbjct: 271 EGAMDFSLSGHIHTQNI 287
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 74.6 bits (182), Expect = 4e-15
Identities = 47/337 (13%), Positives = 88/337 (26%), Gaps = 53/337 (15%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
F +AD+ +A+ + + S + E+ +V GD I G
Sbjct: 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAV-LQWRRERVQCVVQLGDIIDG 64
Query: 104 FDATDAA--KSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL----- 156
+ A ++L+ A A ++ V GNH+ + + + + + T
Sbjct: 65 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS 124
Query: 157 ----------SQVNPSDAHIIDGFGNYNLEIGGVKGSG-------FENKSVLNLYFLDSG 199
+ + IG + S + NL L+
Sbjct: 125 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLP 184
Query: 200 DYSTVPS---VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
S V G Q W + + L++ H+P+
Sbjct: 185 PVSVGLEQRFVKFNGGFSEQQLQWLDAVLT----------LSDHKQERVLIFSHLPVHPC 234
Query: 257 AYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYG 316
A + + + V GHDH C +G Q
Sbjct: 235 AADPICLAWNHEA-----------VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL 283
Query: 317 GGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKS 353
G + ++ +G G V+
Sbjct: 284 EGVIETPPHSHAF----ATAYLYEDRMVMKGRGRVED 316
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 7e-13
Identities = 60/293 (20%), Positives = 89/293 (30%), Gaps = 76/293 (25%)
Query: 30 AKQERKLRFRQNGE--FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS 87
A E +LR ++ + +L ++D H G V +N+
Sbjct: 10 AYVEHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADD----RLGELLEQLNQS-- 63
Query: 88 AEKPDLIVFTGDNIFGFDATDAA-KSLNAAFAPAIAS-NIPWVAVLGNHDQESTLSREGV 145
+PD IVFTGD AA + L P A V V+GNHD R
Sbjct: 64 GLRPDAIVFTGD--LADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHD-----DRA-- 114
Query: 146 MKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVP 205
L+ L PS + I G+ + LD+
Sbjct: 115 -----ELRKFLLDEAPSM-----APLDRVCMIDGL-----------RIIVLDT------- 146
Query: 206 SVPG--YGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL--PEFAYFDQ 261
SVPG +G I+ SQ W + A AP ++ H P
Sbjct: 147 SVPGHHHGEIRASQLGWLAEE------------LATPAPDGTILALHHPPIPSVLDMAVT 194
Query: 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ ++ DV+A+ GH H + GI +
Sbjct: 195 VELR------------DQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVS 234
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 3e-11
Identities = 37/276 (13%), Positives = 72/276 (26%), Gaps = 73/276 (26%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF 104
+ ++D HF + + + ++ + + +N + E+PD +V +GD
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNA----ANADVVSQLNAL--RERPDAVVVSGDI---- 51
Query: 105 DATDAAKSLN-AAFAPAIAS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ + + S N P + GNHD ++ Q
Sbjct: 52 --VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKALFLEY-------------LQPLCP 96
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPG--YGWIKPSQQFW 220
++ L F+DS S G GW+ W
Sbjct: 97 QLGSDANNMRCAVDDFAT-----------RLLFIDS-------SRAGTSKGWLTDETISW 138
Query: 221 FEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPL--PEFAYFDQSNFTGVRQEGISSASVN 278
E + P ++ H P A D +
Sbjct: 139 LEAQ------------LFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHR--------- 177
Query: 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLC 314
+ + +F GH+H + +
Sbjct: 178 --LLALVERFPSLTRIFCGHNHSL-TMTQYRQALIS 210
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 2e-07
Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 54/218 (24%)
Query: 48 QVADMHFANGKTTPCLDVLPSQVAG--CSDLNTTAFINRMISAEKPDLIVFTGDN----- 100
+ + + + V C D+ ++S E+ D I+ + D
Sbjct: 10 ETGEHQYQYKDILS--VFEDAFVDNFDCKDVQD--MPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 101 -IFGFDATDAAKSLNAAFAPAIASNIPWVA----------------------VLGNHDQE 137
+F + + + + N ++ L N +Q
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 138 ST---LSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194
+SR + + L+ L ++ P+ N+ I GV GSG K+ + L
Sbjct: 126 FAKYNVSRL---QPYLKLRQALLELRPAK----------NVLIDGVLGSG---KTWVALD 169
Query: 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAY 232
S + W+ E LQ+
Sbjct: 170 VCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLL 206
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 3e-06
Identities = 52/369 (14%), Positives = 102/369 (27%), Gaps = 84/369 (22%)
Query: 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDN 100
+ + V D G ++A I + D I+ GDN
Sbjct: 4 TPILRFVAVGDW----GGVPNAPFHTAREMA------NAKAIATTVKTLGADFILSLGDN 53
Query: 101 IFGFDATDA-----AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNT 155
+ DA ++ F+ N+PW + GNHD N
Sbjct: 54 FYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLG---------------NV 98
Query: 156 LSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG--------DYSTVPSV 207
+Q+ S I N+ ++ + + ++ LD+ S P
Sbjct: 99 SAQIAYSK---ISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 155
Query: 208 PGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGL-VYFHIPLPEFAYFDQSNFTG 266
P + +Q W ++ A + V H P+ ++ +
Sbjct: 156 PRNLALARTQLAWIKK-------------QLAAAKEDYVLVAGHYPV--WSIAEHGPTHC 200
Query: 267 VRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQ--LCYGGGFGYHAY 324
+ ++ ++ V A GHDH + G+ L G F +
Sbjct: 201 LVKQ-----------LLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSK 249
Query: 325 GKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLT----GVDGHVLWSKTSSG 380
+ + G+ V+ + + ++ G L+
Sbjct: 250 KHLRKVPNGYLRFHFGAENSLGGFAYVE-------ITPKEMSVTYIEASGKSLFKTK--- 299
Query: 381 MRRRKHTNG 389
+ RR +
Sbjct: 300 LPRRARSEH 308
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* Length = 386 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 20/112 (17%)
Query: 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLI 94
+ + +AD H G LD + I KPD++
Sbjct: 15 VPRGSHMMFVHIADNHL--GYRQYNLDDREKDIY--------DSFKLCIKKILEIKPDVV 64
Query: 95 VFTGDNIFGFDA----TDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSR 142
+ +GD F+ A + AF +NI V GNH+ L
Sbjct: 65 LHSGDL---FNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGE 113
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C Length = 379 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 27/109 (24%)
Query: 45 KILQVADMHFANGKT----TPCLDVLPSQVAGCSDLNTTAFINRMIS---AEKPDLIVFT 97
KIL +D H G T + +D +++++ + DLI+ T
Sbjct: 2 KILHTSDWHL--GVTSWTSSRPVDRREELKK---------ALDKVVEEAEKREVDLILLT 50
Query: 98 GDNIFGFD-----ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS 141
GD + + A L + P V + GN D +
Sbjct: 51 GD-LL--HSRNNPSVVALHDLLDYLK-RMMRTAPVVVLPGNQDWKGLKL 95
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 7e-04
Identities = 37/301 (12%), Positives = 79/301 (26%), Gaps = 53/301 (17%)
Query: 69 QVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAF---APAIASNI 125
G + + T + ++ K ++F GD + + + + + +
Sbjct: 133 GDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ 192
Query: 126 PWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGF 185
PW+ GNH+ + + P +A Y ++
Sbjct: 193 PWIWTAGNHEIDYAPDIGEYQPFVPFTNRY---PTPHEASGSGDPLWYAIKRASAH---- 245
Query: 186 ENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQF-WFEQTSARLQRAYMSKPAAQKAPAP 244
+ L S G++K S Q+ WF ++ P
Sbjct: 246 -------IIVLSS----------YSGFVKYSPQYKWFTSELE----------KVNRSETP 278
Query: 245 -GLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVND 303
+V H PL +R F V VF+GH H +
Sbjct: 279 WLIVLVHAPLYNSYEAHYMEGEAMRAI-----------FEPYFVYYKVDIVFSGHVHSYE 327
Query: 304 FCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDE 363
R++ + ++ + + +E + ++ +
Sbjct: 328 RSERVSNVAYNIVNAKCTPVSDESAPV---YITIGDGGNSEGLASEMTQPQPSYSAFREA 384
Query: 364 H 364
Sbjct: 385 S 385
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 39.7 bits (92), Expect = 8e-04
Identities = 27/262 (10%), Positives = 51/262 (19%), Gaps = 74/262 (28%)
Query: 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGD 99
+ IL ++ DL ++ D I G+
Sbjct: 2 RRTVRYILATSNPMG--------------------DLEALEKFVKLAPDTGADAIALIGN 41
Query: 100 NIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD-QESTLSREGVMKHIVTLKNTLSQ 158
+ + + F +++P V G D RE +V
Sbjct: 42 LMPKAAKSRDYAAF---FRILSEAHLPTAYVPGPQDAPIWEYLREAANVELVH------- 91
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQ 218
+ + + G +G G P
Sbjct: 92 ---PEMRNVH--ETFTFWRGPYLVAGV-------------GGEIADEGEPEEH------- 126
Query: 219 FWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278
Y K + P + FH P ++ V
Sbjct: 127 --EALRYPAWVAEYRLKALWELKDYPKIFLFHTM-PYHKGLNEQGSHEVAH--------- 174
Query: 279 SGFFTTMVAAGDVKAVFTGHDH 300
++ + V
Sbjct: 175 ------LIKTHNPLLVLVAGKG 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.95 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.93 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.93 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.92 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.9 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.9 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.88 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.75 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.73 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.73 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.71 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.67 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.65 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.63 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.62 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.6 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.6 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.57 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.56 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.54 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.51 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.51 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.47 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.42 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.39 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.33 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.32 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 99.31 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.26 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 99.06 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 99.02 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.95 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.91 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.82 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.79 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.68 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.65 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.39 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.38 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.16 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.04 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.98 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.98 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.78 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.78 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.59 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.54 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.53 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.5 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.47 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.4 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.35 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.18 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.13 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.82 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 95.88 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-26 Score=222.44 Aligned_cols=265 Identities=14% Similarity=0.135 Sum_probs=151.2
Q ss_pred CCcceeccCCCCeEEEEEecccccCCCCCCCCCCCc----ccccCC--CChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC
Q 016429 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLP----SQVAGC--SDLNTTAFINRMISAEKPDLIVFTGDNIFGFD 105 (390)
Q Consensus 32 ~~~~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~ 105 (390)
++.++++.++..|||+++||+|++............ ....+. .....++.+.+.++..+||+||++||++. .+
T Consensus 28 ~~~~~~~~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~-~~ 106 (443)
T 2xmo_A 28 EKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN-NG 106 (443)
T ss_dssp -----CBCSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBS-SC
T ss_pred ccccccccCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCC-CC
Confidence 344566778889999999999997432100000000 000000 01234455556666789999999999554 44
Q ss_pred hhhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCCCCC---------------HHHHHHHHHHcCCCccccCCCCCccccCc
Q 016429 106 ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS---------------REGVMKHIVTLKNTLSQVNPSDAHIIDGF 170 (390)
Q Consensus 106 ~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~---------------~~~~~~~~~~~~~~~~~~~p~~~~~~~g~ 170 (390)
....+..+.+.+..+...++|+++|+||||...... ...+.+.+....+ .........+
T Consensus 107 ~~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~- 180 (443)
T 2xmo_A 107 EKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGY-----EDAISSDEFS- 180 (443)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCC-----TTCSEECSSS-
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcCh-----hhhhccCCCC-
Confidence 444455666677766556899999999999965432 2222222111000 0000000001
Q ss_pred cceeEEeccCCCCCCCCcceEEEEEEeCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEE
Q 016429 171 GNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTV---PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLV 247 (390)
Q Consensus 171 ~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~---~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv 247 (390)
..|.....+ .+++++|||..+... ......|.+.++|++||++.+++.++ .+.++|+
T Consensus 181 ~~y~~~~~~----------~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~----------~~~~~Iv 240 (443)
T 2xmo_A 181 LSYLAAPSS----------KVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK----------NGAKLIP 240 (443)
T ss_dssp SCEEECSBS----------SEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH----------TTCEEEE
T ss_pred ceEEEecCC----------CEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH----------cCCeEEE
Confidence 123332111 289999999765321 00113477999999999999987653 4567899
Q ss_pred EEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccc--cCC--eEEEecCCCCCCC
Q 016429 248 YFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR--LTG--IQLCYGGGFGYHA 323 (390)
Q Consensus 248 ~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~--~~g--i~~~~~~~~g~~~ 323 (390)
++|||+......+. .. ....+...+..+++.++|+++||||+|.+..... .+| +..+.+++.+.
T Consensus 241 ~~H~p~~~~~~~~~--------~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-- 308 (443)
T 2xmo_A 241 VLHHNLTDHNDVIQ--------KG--YTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-- 308 (443)
T ss_dssp ECSSBSSCSSCC----------CC--SBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS--
T ss_pred EECCCCcccccccc--------cc--cccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc--
Confidence 99999865322110 00 1123566677777777899999999999654321 233 44444444321
Q ss_pred CCCCCCCceeEEEEEec
Q 016429 324 YGKAGWERRARVVVASL 340 (390)
Q Consensus 324 ~~~~~~~~g~rv~ei~~ 340 (390)
.+++|++++++.
T Consensus 309 -----~p~~y~il~i~~ 320 (443)
T 2xmo_A 309 -----FPHKYGNITYSA 320 (443)
T ss_dssp -----TTCEEEEEEEET
T ss_pred -----CCCCeEEEEEeC
Confidence 247899999984
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-25 Score=206.14 Aligned_cols=236 Identities=20% Similarity=0.224 Sum_probs=155.7
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHH
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAF 117 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l 117 (390)
.+.+|||+++||+|++......... ......++.+.+.+++ .+||+||++||+ ++.+..+.+..+.+.+
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~--------~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl-~~~~~~~~~~~~~~~l 92 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGA--------VDADDRLGELLEQLNQSGLRPDAIVFTGDL-ADKGEPAAYRKLRGLV 92 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTT--------BCHHHHHHHHHHHHHHHTCCCSEEEECSCC-BTTCCHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCccCCCCcccccc--------cCHHHHHHHHHHHHHhcCCCCCEEEECCCC-CCCCCHHHHHHHHHHH
Confidence 3568999999999997654321110 0123345555555655 799999999994 5555556666777777
Q ss_pred hHhHh-CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEE
Q 016429 118 APAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 118 ~~~~~-~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~l 196 (390)
+++.+ .++|+++|+||||.. ..+.+.+.... ...+..+|.+.+.+ +++++|
T Consensus 93 ~~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~~------------~~~~~~~~~~~~~~-----------~~~i~l 144 (330)
T 3ib7_A 93 EPFAAQLGAELVWVMGNHDDR-----AELRKFLLDEA------------PSMAPLDRVCMIDG-----------LRIIVL 144 (330)
T ss_dssp HHHHHHHTCEEEECCCTTSCH-----HHHHHHHHCCC------------CCCSCCCEEEEETT-----------EEEEEC
T ss_pred HHHHhhcCCCEEEeCCCCCCH-----HHHHHHhcccc------------cccCCcceEEEeCC-----------EEEEEe
Confidence 76533 589999999999972 22222221110 01122356777766 899999
Q ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCC
Q 016429 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (390)
Q Consensus 197 ds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~ 276 (390)
|+..+.. ..+++..+|++||++.|++. .....|+++|||+......+ ... ...
T Consensus 145 ds~~~~~-----~~~~~~~~q~~wl~~~l~~~------------~~~~~iv~~Hh~p~~~~~~~------~~~----~~~ 197 (330)
T 3ib7_A 145 DTSVPGH-----HHGEIRASQLGWLAEELATP------------APDGTILALHHPPIPSVLDM------AVT----VEL 197 (330)
T ss_dssp CCCCTTC-----CSBCCCHHHHHHHHHHTTSC------------CTTCEEEECSSCSSCCSSGG------GGG----GSB
T ss_pred cCCCCCC-----CCCccCHHHHHHHHHHHHhc------------ccCCeEEEEECCCCCCCccc------ccc----ccc
Confidence 9964321 35779999999999987542 34458999999875421111 000 112
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCC--------CCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK--------AGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~--------~~~~~g~rv~ei~~ 340 (390)
.+...+..+++.+++++++|||+|.+ .....+|+.++.++++++..... ....++|++++|+.
T Consensus 198 ~~~~~l~~~l~~~~v~~v~~GH~H~~-~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~ 268 (330)
T 3ib7_A 198 RDQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYP 268 (330)
T ss_dssp SCHHHHHHHHTTSSEEEEEECSSSSC-EEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECS
T ss_pred cCHHHHHHHHhccCceEEEECCCCCc-ccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEEC
Confidence 45677788888889999999999994 56678899999888887532111 12357899999974
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=206.22 Aligned_cols=270 Identities=18% Similarity=0.198 Sum_probs=155.1
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCC-ChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCS-DLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAF 117 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l 117 (390)
+..|||+++||+|++...........+.. .+. ....++.+.+.+++.+||+||++||++...... ...+.+..++
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRR--YYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVM 80 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEE--CTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHH--HHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHH
Confidence 56799999999999864321000000000 000 112334444445568999999999965443211 0123344444
Q ss_pred hHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccc--cCccceeEEe-ccCCCCCCCCcceEEEE
Q 016429 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHII--DGFGNYNLEI-GGVKGSGFENKSVLNLY 194 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~g~~~y~~~~-~~~~~~~~~~~~~~~l~ 194 (390)
+.+.+.++|+++++||||... .+++.+.+ .+........+...... .+..+|++.. .+ ++++
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~-----------~~~i 145 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFYN-FSRPSLLS---SRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN-----------FRFV 145 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHHH-CCHHHHHT---STTCCCC------CEECGGGTCCCEEEEEETT-----------EEEE
T ss_pred HHHHhcCCcEEEecCCCCccc-CCHHHHhh---hhCCcccccccccccccCCCCceEEEEecCCC-----------EEEE
Confidence 444446899999999999842 22332222 11110000000000001 2334577665 44 8899
Q ss_pred EEeCCCCCCC--------------------CC-----------------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCc
Q 016429 195 FLDSGDYSTV--------------------PS-----------------VPGYGWIKPSQQFWFEQTSARLQRAYMSKPA 237 (390)
Q Consensus 195 ~lds~~~~~~--------------------~~-----------------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~ 237 (390)
+||+..++.. +. ....+.+.++|++||++.|++..+
T Consensus 146 ~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~------- 218 (322)
T 2nxf_A 146 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH------- 218 (322)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-------
T ss_pred EEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-------
Confidence 9999764210 00 001366889999999999987653
Q ss_pred ccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCCcccccCCeEEEec
Q 016429 238 AQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 238 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (390)
...++|+++|||+..... . . .....+.+.+..++..+ +|+++||||+|.+......+|+.++..
T Consensus 219 ---~~~~~iv~~H~p~~~~~~-~--------~---~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~ 283 (322)
T 2nxf_A 219 ---KQERVLIFSHLPVHPCAA-D--------P---ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL 283 (322)
T ss_dssp ---HTCEEEEEESSCCCTTSS-C--------G---GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEEC
T ss_pred ---cCCcEEEEEccCCCCCCC-C--------c---cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEe
Confidence 256789999999865211 0 0 01112556677777766 799999999999655443788888777
Q ss_pred CCCCCCCCCCCCCCceeEEEEEecccccccCCCCcCceEEEEEccC
Q 016429 317 GGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362 (390)
Q Consensus 317 ~~~g~~~~~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~ 362 (390)
+++.-.. .-.++|++++++.+. ..++.|-|..+
T Consensus 284 ~~~~~~~----~~~~~y~~v~~~~~~---------~~~~~~~~~~~ 316 (322)
T 2nxf_A 284 EGVIETP----PHSHAFATAYLYEDR---------MVMKGRGRVED 316 (322)
T ss_dssp CCGGGCC----TTSCEEEEEEECSSE---------EEEEEEETSCC
T ss_pred cchhhCC----CCCCcEEEEEEECCe---------EEEEeccccCC
Confidence 6653211 235789999997432 45667755543
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-23 Score=191.35 Aligned_cols=233 Identities=17% Similarity=0.178 Sum_probs=141.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
|||+++||+|++......+. .......++.+.+.+++. +||+||++||++. .+....++.+.+.++.
T Consensus 1 mri~~iSD~H~~~~~~~~~g--------~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~-- 69 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYG--------FIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGS-- 69 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTT--------TBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTT--
T ss_pred CEEEEEecCCcCCCCccccc--------ccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHh--
Confidence 79999999999853221100 000122344444444443 6899999999554 4444444445455443
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCC
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~ 201 (390)
.++|+++|+||||... .+.+.+... +.... . ..+..+|.+...+ +++++||+..+
T Consensus 70 -l~~p~~~v~GNHD~~~-----~~~~~~~~~---~~~~~-~----~~~~~~~~~~~~~-----------~~~i~ld~~~~ 124 (274)
T 3d03_A 70 -LNYPLYLIPGNHDDKA-----LFLEYLQPL---CPQLG-S----DANNMRCAVDDFA-----------TRLLFIDSSRA 124 (274)
T ss_dssp -CSSCEEEECCTTSCHH-----HHHHHHGGG---SGGGC-S----CGGGCCEEECSSS-----------SEEEECCCCCT
T ss_pred -cCCCEEEECCCCCCHH-----HHHHHhhhh---hcCcc-c----CCCceEEEEEeCC-----------EEEEEEeCCCC
Confidence 5789999999999832 222222211 00000 0 0022346655444 78999999644
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHH
Q 016429 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (390)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~ 281 (390)
.. ..+.+.++|++||++.|++. +..++|+++|+|+......+ ... ....+...
T Consensus 125 ~~-----~~~~~~~~~~~wl~~~l~~~------------~~~~~iv~~H~p~~~~~~~~------~~~----~~~~~~~~ 177 (274)
T 3d03_A 125 GT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQ------MDP----IACENGHR 177 (274)
T ss_dssp TC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTT------TGG----GSBTTTHH
T ss_pred CC-----CCCeeCHHHHHHHHHHHHhC------------CCCCEEEEECCCCcccCCcc------cCc----ccCcCHHH
Confidence 22 35678999999999998753 45689999999985421111 000 01134556
Q ss_pred HHHHHHcC-CeeEEEeccCCCCCcccccCCeEEEecCCCCCCCC-C-------CCCCCceeEEEEEec
Q 016429 282 FTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-G-------KAGWERRARVVVASL 340 (390)
Q Consensus 282 ~~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~-~-------~~~~~~g~rv~ei~~ 340 (390)
+..+++.+ +++++||||+|.. .....+|+.++.+++++.+.. . ....+++|++++++.
T Consensus 178 l~~~l~~~~~v~~vl~GH~H~~-~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~ 244 (274)
T 3d03_A 178 LLALVERFPSLTRIFCGHNHSL-TMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVG 244 (274)
T ss_dssp HHHHHHHCTTEEEEEECSSSSC-EEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEET
T ss_pred HHHHHHhCCCceEEEeCCCCCc-hhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEeC
Confidence 66777665 7999999999994 445578887777766653211 1 012358999999973
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-25 Score=205.09 Aligned_cols=270 Identities=17% Similarity=0.213 Sum_probs=156.1
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh-HHHHHHHHHhH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAFAP 119 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~-~~~~~~~~l~~ 119 (390)
++.|||+++||+|++....... .....+.+.+.+.+++.+||+||++||+++..+... ....+.+.+..
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~ 73 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHT----------AREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFED 73 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSC----------HHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTT
T ss_pred CCceEEEEEcccCCCCCccccC----------chHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHH
Confidence 5789999999999875421000 001234566777777889999999999776543211 01123333333
Q ss_pred hH---hC-CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEE
Q 016429 120 AI---AS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195 (390)
Q Consensus 120 ~~---~~-~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ 195 (390)
+. .. ++|+++|+||||...+.... ..+. . ... .......+|.+.+.-.. ....+++++
T Consensus 74 ~~~~~~l~~~p~~~v~GNHD~~~~~~~~--~~~~-~-------~~~---~~~~~~~~y~~~~~~~~-----~~~~~~~i~ 135 (313)
T 1ute_A 74 VFSDPSLRNVPWHVLAGNHDHLGNVSAQ--IAYS-K-------ISK---RWNFPSPYYRLRFKIPR-----SNVSVAIFM 135 (313)
T ss_dssp TSCSGGGTTCCEEECCCHHHHHSCHHHH--HHGG-G-------TST---TEECCSSSEEEEEECTT-----SSCEEEEEE
T ss_pred HcCchhhcCCCEEEECCCCccCCCcccc--cccc-c-------cCC---CccCcccceEEEEecCC-----CCceEEEEE
Confidence 22 24 79999999999986543211 1110 0 000 01111234555542100 012389999
Q ss_pred EeCCCCCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccc
Q 016429 196 LDSGDYSTV--------PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV 267 (390)
Q Consensus 196 lds~~~~~~--------~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~ 267 (390)
|||..+... +.....+.+..+|++||++.|++. +..++|+++|+|+...... +.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~------------~~~~~iv~~H~p~~~~~~~------~~ 197 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA------------KEDYVLVAGHYPVWSIAEH------GP 197 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC------------CCSEEEEECSSCSSCCSSS------CC
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhC------------CCCeEEEEECCCCccCCCC------CC
Confidence 998542110 001123457889999999987752 4578999999999542110 00
Q ss_pred cCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCC-----------------CCCC
Q 016429 268 RQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK-----------------AGWE 330 (390)
Q Consensus 268 ~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~-----------------~~~~ 330 (390)
.. ...+.+..+++.++|+++||||+|........+|+.++.+|+.+...... ....
T Consensus 198 ~~-------~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (313)
T 1ute_A 198 TH-------CLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270 (313)
T ss_dssp CH-------HHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSC
T ss_pred cH-------HHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCC
Confidence 00 01244566677678999999999986666557888888777665321110 0112
Q ss_pred ceeEEEEEecccccccCCCCcCceE-EEEEccCCCCCcccceeEeecc
Q 016429 331 RRARVVVASLEKTEKRGWGDVKSIK-TWKRLDDEHLTGVDGHVLWSKT 377 (390)
Q Consensus 331 ~g~rv~ei~~~~~~~~~~~~~~~~~-tw~r~~~~~~~~~d~~~l~~~~ 377 (390)
+||.+++|+.+ .++ ++... +|. ++++..|....
T Consensus 271 ~gy~~l~v~~~-----------~~~~~~~~~-~g~--~~~~~~l~~~~ 304 (313)
T 1ute_A 271 GGFAYVEITPK-----------EMSVTYIEA-SGK--SLFKTKLPRRA 304 (313)
T ss_dssp CEEEEEEECSS-----------CEEEEEEET-TSC--EEEEEEECCCC
T ss_pred CceEEEEEEcC-----------EEEEEEEcC-CCc--EEEEEEecccc
Confidence 69999998632 232 23333 444 78888776653
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=195.60 Aligned_cols=277 Identities=12% Similarity=0.048 Sum_probs=154.1
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh----hhHHHHHHHHH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA----TDAAKSLNAAF 117 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~----~~~~~~~~~~l 117 (390)
.+++|++++|+|.+... .....+.|.++++.++|||||++||+++.+.. +...+.+.+++
T Consensus 2 ~~l~f~~igD~g~g~~~----------------q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~ 65 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG----------------QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVY 65 (342)
T ss_dssp CCEEEEECCSCBSCCHH----------------HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTS
T ss_pred ceEEEEEEecCCCCCch----------------HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHh
Confidence 46899999999975321 23456778888888999999999998777321 11122233333
Q ss_pred hHh-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHc-C-C----Cc--cccCCCCCccccCccceeEEe--ccCCCCCCC
Q 016429 118 APA-IASNIPWVAVLGNHDQESTLSREGVMKHIVTL-K-N----TL--SQVNPSDAHIIDGFGNYNLEI--GGVKGSGFE 186 (390)
Q Consensus 118 ~~~-~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~-~-~----~~--~~~~p~~~~~~~g~~~y~~~~--~~~~~~~~~ 186 (390)
... ...++||+.|+||||+..+.. .++ +..... . . .+ ........++.....+|++.. .-..+..+.
T Consensus 66 ~~~~~~~~~P~~~vlGNHD~~~~~~-aq~-~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~ 143 (342)
T 3tgh_A 66 SEEKGDMYMPFFTVLGTRDWTGNYN-AQL-LKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIV 143 (342)
T ss_dssp CCGGGTTCSEEEECCCHHHHTSCHH-HHH-HHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC------
T ss_pred hhhhhhhCCCEEEeCCCCccCCCch-Hhh-hhhhcccccccccccccccccccCCCCccCCcceEEEEEEeecccccccc
Confidence 222 246899999999999976532 222 111100 0 0 00 000111112222223454321 100000000
Q ss_pred ----CcceEEEEEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccC
Q 016429 187 ----NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQ 261 (390)
Q Consensus 187 ----~~~~~~l~~lds~~~~~~~~~~-~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~ 261 (390)
....++|++|||.......... ..+...++|++||++.|+ ...++|+++|||++.....
T Consensus 144 ~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~--------------~~~~~IV~~HhP~~~~~~~-- 207 (342)
T 3tgh_A 144 KTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK--------------IADFIIVVGDQPIYSSGYS-- 207 (342)
T ss_dssp ---CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH--------------HCSEEEEECSSCSSCSSTT--
T ss_pred ccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc--------------cCCcEEEEECCCCCCCCCC--
Confidence 0123899999996543210000 001134689999999983 2468999999999652110
Q ss_pred CCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCC---C------CCCce
Q 016429 262 SNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK---A------GWERR 332 (390)
Q Consensus 262 ~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~---~------~~~~g 332 (390)
+. . ....+.|..|+.+++|+++||||+|..... ..+|+..+.+|+.|...... . .-..|
T Consensus 208 ----~~---~----~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~-~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~G 275 (342)
T 3tgh_A 208 ----RG---S----SYLAYYLLPLLKDAEVDLYISGHDNNMEVI-EDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIG 275 (342)
T ss_dssp ----CC---C----HHHHHHTHHHHHHTTCCEEEECSSSSEEEE-EETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSE
T ss_pred ----CC---c----HHHHHHHHHHHHHcCCCEEEECCCcceeEE-eeCCcEEEEeCccccccccCCCCCCcceeecCCCc
Confidence 00 0 011355677888889999999999996543 35678777766655322111 1 12478
Q ss_pred eEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeec
Q 016429 333 ARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSK 376 (390)
Q Consensus 333 ~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~ 376 (390)
|.+++++.+. -..+++...+|+ ++|+..|..+
T Consensus 276 f~~l~v~~~~----------l~~~~~~~~~G~--vld~~~i~k~ 307 (342)
T 3tgh_A 276 FCVHELSNNG----------IVTKFVSSKKGE--VIYTHKLNIK 307 (342)
T ss_dssp EEEEEEETTE----------EEEEEEETTTTE--EEEEEEEECC
T ss_pred EEEEEEECCE----------EEEEEEECCCCc--EEEEEEEECC
Confidence 9999987321 111222224555 7888888776
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=195.40 Aligned_cols=261 Identities=15% Similarity=0.177 Sum_probs=156.2
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCCh----hhHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~----~~~~~~~~~ 115 (390)
...+||+++||+|.+.. ....+..+.+. .+|||||++||+++..+. ...+..+.+
T Consensus 124 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~ 183 (426)
T 1xzw_A 124 DVPYVFGLIGDIGQTHD--------------------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGR 183 (426)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCc--------------------hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHH
Confidence 46799999999996521 11233333333 399999999997765432 233445566
Q ss_pred HHhHhHhCCCCEEEEeCCCCCCCCCC---HHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEE
Q 016429 116 AFAPAIASNIPWVAVLGNHDQESTLS---REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (390)
Q Consensus 116 ~l~~~~~~~ip~~~v~GNHD~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (390)
.++++. ..+|+++++||||...... ...+..+...+. .|.......+..+|++.+.+ ++
T Consensus 184 ~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~p~~~~~~~~~~~ys~~~g~-----------~~ 245 (426)
T 1xzw_A 184 FSERSV-AYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYP------TPHEASGSGDPLWYAIKRAS-----------AH 245 (426)
T ss_dssp HHHHHH-TTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSC------CCCGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCEEEeccccccccCCccccccCChhheEEEe------CCcccCCCCCCCeEEEEECC-----------EE
Confidence 666654 5899999999999975321 001112222221 12110111233467777765 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCC
Q 016429 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (390)
Q Consensus 193 l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~ 272 (390)
+++|||... ++ ...+|++||++.|++..+ ....++|+++|+|++..... . ..+.
T Consensus 246 ~i~Ldt~~~--------~~-~~~~Q~~WL~~~L~~~~~---------~~~~w~Iv~~H~P~~~~~~~--~-----~~~~- 299 (426)
T 1xzw_A 246 IIVLSSYSG--------FV-KYSPQYKWFTSELEKVNR---------SETPWLIVLVHAPLYNSYEA--H-----YMEG- 299 (426)
T ss_dssp EEECCTTSC--------CS-TTSHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBST--T-----TTTT-
T ss_pred EEEeeCccc--------CC-CCHHHHHHHHHHHHhhhh---------cCCCEEEEEeccCceeCCCc--c-----cCCC-
Confidence 999999421 11 357899999999886421 13457999999998642110 0 0010
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccc------------------cCCeEEEecCCCCCC-----CCC--CC
Q 016429 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR------------------LTGIQLCYGGGFGYH-----AYG--KA 327 (390)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~------------------~~gi~~~~~~~~g~~-----~~~--~~ 327 (390)
..-.+.|..++.+++|+++|+||+|..+.... .+|+..+..|+.|.. .+. .+
T Consensus 300 ---~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 ---EAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp ---HHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred ---HHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCC
Confidence 01135567777777899999999999654431 134444444443321 111 11
Q ss_pred CC------CceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeecc
Q 016429 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (390)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~~ 377 (390)
.| ..|+-.++|..+ .....+|+|..+++..++|+.+|.++.
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNR---------THAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcC---------CeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 22 346667777421 133567888888876689999998863
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=190.09 Aligned_cols=264 Identities=16% Similarity=0.168 Sum_probs=153.4
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCCh----hhHHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~----~~~~~~~~~ 115 (390)
...|||+++||+|.+.. ..+.+..+.+. .+||+||++||+++..+. ...++.+.+
T Consensus 117 ~~~~~f~~igD~~~~~~--------------------~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~ 176 (424)
T 2qfp_A 117 DVPYTFGLIGDLGQSFD--------------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGR 176 (424)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCC--------------------hHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHH
Confidence 46799999999997531 11223333332 389999999998776431 123445556
Q ss_pred HHhHhHhCCCCEEEEeCCCCCCCCCCHH---HHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEE
Q 016429 116 AFAPAIASNIPWVAVLGNHDQESTLSRE---GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (390)
Q Consensus 116 ~l~~~~~~~ip~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (390)
.++++. ..+|+++++||||........ .+..+...+.. |.......+..+|++.+++ ++
T Consensus 177 ~l~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~------P~~~~~~~~~~~ys~~~g~-----------~~ 238 (424)
T 2qfp_A 177 FTERSV-AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHV------PYEASQSTSPFWYSIKRAS-----------AH 238 (424)
T ss_dssp HHHHHH-TTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCC------CGGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCeEeecCCcccccCCcccccccchhhhhhccC------CccccCCCCCcEEEEEECC-----------EE
Confidence 666553 479999999999986431100 11122222211 1110011223467888765 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCC
Q 016429 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (390)
Q Consensus 193 l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~ 272 (390)
+++|||... ++.. .+|++||++.|++..+ ....++|+++|+|++..... .+.+..
T Consensus 239 ~i~Ldt~~~--------~~~~-~~Q~~WL~~~L~~~~~---------~~~~~~Iv~~H~P~~~~~~~-------~~~~~~ 293 (424)
T 2qfp_A 239 IIVLSSYSA--------YGRG-TPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNH-------HFMEGE 293 (424)
T ss_dssp EEECCTTSC--------CSTT-SHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBST-------TTTTTH
T ss_pred EEEecCCcc--------CCCc-HHHHHHHHHHHhhhcc---------cCCCEEEEEeCcCceecCcc-------cccccH
Confidence 999999421 2222 4799999999886421 13467999999999652110 000000
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCCccccc------------------CCeEEEecCCCCCC-----CC--CCC
Q 016429 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRL------------------TGIQLCYGGGFGYH-----AY--GKA 327 (390)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~------------------~gi~~~~~~~~g~~-----~~--~~~ 327 (390)
.-...+..++.+++|+++|+||+|..+..... +|...+..|+.|.. .+ ..+
T Consensus 294 ----~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p 369 (424)
T 2qfp_A 294 ----AMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQP 369 (424)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCC
T ss_pred ----HHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCC
Confidence 01245667777788999999999995544321 23333333333321 11 111
Q ss_pred CC------CceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeecccCc
Q 016429 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSSG 380 (390)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~~~~~ 380 (390)
.| ..|+-.+++... .....+|.+..+|+..+.|+.+|.++...-
T Consensus 370 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 370 EYSAFREASFGHGMFDIKNR---------THAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred CcceEEecCCCEEEEEEEcC---------cEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 22 246666776421 133456888888886568999998875443
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-17 Score=145.66 Aligned_cols=210 Identities=11% Similarity=0.015 Sum_probs=110.4
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
.|||+++||+|.+. ..++.+.+.+++++||+||++||++......+.. .+.++.+.+
T Consensus 5 ~mri~~iSD~H~~~--------------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~---~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDL--------------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDY---AAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCH--------------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHH---HHHHHHHGG
T ss_pred eEEEEEEeeccCCH--------------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHH---HHHHHHHHh
Confidence 58999999999652 2234555666667999999999954433233322 334444444
Q ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYS 202 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~ 202 (390)
.++|+++|+||||.... +.+.+.... ....|.. .... +....+.+ .++++.+++....
T Consensus 62 ~~~pv~~v~GNHD~~~~---~~~~~~~~~-----~~~~~~~-~~l~---~~~~~~~~----------~~~i~g~~~~~~~ 119 (228)
T 1uf3_A 62 AHLPTAYVPGPQDAPIW---EYLREAANV-----ELVHPEM-RNVH---ETFTFWRG----------PYLVAGVGGEIAD 119 (228)
T ss_dssp GCSCEEEECCTTSCSHH---HHHHHHHHH-----HHHCTTE-EECB---TSEEEETT----------TEEEEEECSEEES
T ss_pred cCCcEEEECCCCCchhH---HHHHhhhhh-----hccCcce-EEcc---cceEeeCC----------CcEEecCCCCcCC
Confidence 67899999999998431 111111100 0000110 0011 11122221 1667777652110
Q ss_pred CCCCCCCCCCCCHHHH----HHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 203 TVPSVPGYGWIKPSQQ----FWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 203 ~~~~~~~~g~i~~~q~----~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
. + .++++++ .|..+.+.+.-++ ....+.|+++|+|+... . . ...+
T Consensus 120 ~------~-~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~il~~H~p~~~~---~--------~-----~~~~ 168 (228)
T 1uf3_A 120 E------G-EPEEHEALRYPAWVAEYRLKALWE--------LKDYPKIFLFHTMPYHK---G--------L-----NEQG 168 (228)
T ss_dssp S------S-CCBSSSSCEEEHHHHHHHHGGGGG--------SCSCCEEEEESSCBCBT---T--------T-----BTTS
T ss_pred C------C-ccChhhcccchhhhHHHHHHHHHh--------CCCCCeEEEEccCcccC---C--------c-----cccC
Confidence 0 0 1233333 3433321111010 13458999999998431 0 0 0123
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
...+..+++..++++++|||+|. . ....++..++..|+.+ ..++-+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~GH~H~-~-~~~~~~~~~in~Gs~~---------~~~~~i~~~~ 218 (228)
T 1uf3_A 169 SHEVAHLIKTHNPLLVLVAGKGQ-K-HEMLGASWVVVPGDLS---------EGEYSLLDLR 218 (228)
T ss_dssp BHHHHHHHHHHCCSEEEECCSSC-E-EEEETTEEEEECCBGG---------GTEEEEEETT
T ss_pred HHHHHHHHHHhCCCEEEEccccc-C-ccccCCceEEEecccC---------CCceEEEEec
Confidence 44566666666799999999993 3 3445677766665543 2356666653
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-17 Score=152.26 Aligned_cols=251 Identities=17% Similarity=0.069 Sum_probs=122.5
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFA 118 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l~ 118 (390)
...|||+|+||+|+|......... ..+. ......++.+.+.+++++||+||++||++++.+.+ .....+.+.+.
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~--~~r~--~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~ 91 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRP--VDRR--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLK 91 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCC--EECH--HHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccC--cChh--HHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHH
Confidence 467999999999998321000000 0000 00123556666777788999999999944444332 33345566676
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
.+.+. +|+++|+||||... . ....+++...+.+...+... .... ...+.+ ..+.+++++.
T Consensus 92 ~L~~~-~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~--~~~~-----~~~~~~---------~~v~i~glp~ 151 (336)
T 2q8u_A 92 RMMRT-APVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSF--EPVD-----VEAKRG---------QKVRILPFPY 151 (336)
T ss_dssp HHHHH-SCEEECCC-------C--HHHHHHHHHHCSSEEECCSS--SCEE-----EECTTS---------CEEEEEEECC
T ss_pred HHHhc-CCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEecc--cccC-----ceEEeC---------CCEEEEECCC
Confidence 66544 89999999999865 2 22333333221111111000 0000 000100 1266777764
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
........ ..+....++++|+.+.+..-.. ....+.|++.|+|+............ . ...+ .
T Consensus 152 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~Ill~H~~~~~~~~~~~~~~~-~-~~~v-----~ 213 (336)
T 2q8u_A 152 PDESEALR--KNEGDFRFFLESRLNKLYEEAL---------KKEDFAIFMGHFTVEGLAGYAGIEQG-R-EIII-----N 213 (336)
T ss_dssp C---------CCSSHHHHHHHHHHHHHHHHHH---------TCSSEEEEEEESEETTCC---------C-CCEE-----C
T ss_pred CCHHHHHH--HhhHHHHHHHHHHHHHHHHhcc---------CCCCCEEEEECccccCCCCCCCccch-h-hccc-----C
Confidence 21100000 0122345677887766543110 14568999999998531100000000 0 0000 0
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEec
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~ 340 (390)
..+. ..+++++++||+|...... .+..++|+|+.....++..+..+++-+++++.
T Consensus 214 ----~~l~-~~~~d~v~~GH~H~~~~~~--~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~ 268 (336)
T 2q8u_A 214 ----RALI-PSVVDYAALGHIHSFREIQ--KQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 268 (336)
T ss_dssp ----GGGS-CTTSSEEEEESCSSCEEEE--ETTEEEECCCSSCCSGGGTTCCCEEEEEEEET
T ss_pred ----HHHc-cccCCEEEEccccCceEeC--CCccEEECCCCcCCCccccCCCCEEEEEEEeC
Confidence 1122 2369999999999954322 23466777766323333333468999999974
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=146.83 Aligned_cols=217 Identities=14% Similarity=0.147 Sum_probs=114.7
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhH-------------
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA------------- 109 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~------------- 109 (390)
.|||+++||+|.+.. .++.+.+.++..+||+||++|| +++.+....
T Consensus 5 ~mri~~iSDlH~~~~--------------------~~~~~l~~~~~~~~D~vi~~GD-l~~~~~~~~~~~~~~~~~~~p~ 63 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD--------------------LLPKLKGVIAEKQPDILVVVGN-ILKNEALEKEYERAHLARREPN 63 (260)
T ss_dssp CCEEEEEECCTTCGG--------------------GHHHHHHHHHHHCCSEEEEESC-CCCCHHHHHHHHHHHHTTCCCC
T ss_pred eEEEEEEeecCCChH--------------------HHHHHHHHHHhcCCCEEEECCC-CCCccCcchhhhhhhhhhcccc
Confidence 589999999997531 1244555666689999999999 555433211
Q ss_pred -----------HHHHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEec
Q 016429 110 -----------AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178 (390)
Q Consensus 110 -----------~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~ 178 (390)
.+.+.+.++.+.+.++|+++|+||||.... ..+.+.+.... ..+. ..... +.+.+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~-----~~~~-~~~l~--~~~~~~~~ 132 (260)
T 2yvt_A 64 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAET-----AYPN-IRVLH--EGFAGWRG 132 (260)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTT-----TCTT-EEECS--SEEEEETT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhcc-----CCcc-eEEec--CcceEEEC
Confidence 033455556555568999999999998421 11112222210 0000 00011 11113333
Q ss_pred cCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHH----HHHH-HHHHHHHhhcCCCcccCCCCCeEEEEecCh
Q 016429 179 GVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQF----WFEQ-TSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253 (390)
Q Consensus 179 ~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~----Wl~~-~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~ 253 (390)
+ ++++.++...... .++++++. |+.+ .|+.+.+ ....+.|+++|+|+
T Consensus 133 ~-----------~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~---------~~~~~~Il~~H~pp 184 (260)
T 2yvt_A 133 E-----------FEVIGFGGLLTEH--------EFEEDFVLKYPRWYVEYILKFVNE---------LKPRRLVTIFYTPP 184 (260)
T ss_dssp T-----------EEEEEECSEEESS--------CCBSSSSCEEEHHHHHHHGGGGGG---------SCCCEEEEEESSCC
T ss_pred C-----------EEEEecCCCcCCC--------CcCHHHHhhcchhhHHHHHHHHHh---------cCCCCEEEEECCCc
Confidence 3 6788877532111 12222332 5542 1111111 12456799999987
Q ss_pred hhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCcee
Q 016429 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRA 333 (390)
Q Consensus 254 ~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~ 333 (390)
.... .+ ... . .....++..+..+++..++++++|||+|. .....++..++..|+.+- | ++
T Consensus 185 ~~~~-~d--~~~----~--~~~~~~~~~l~~~~~~~~~~~vl~GH~H~--~~~~~~~~~~in~Gs~~~---g------~~ 244 (260)
T 2yvt_A 185 IGEF-VD--RTP----E--DPKHHGSAVVNTIIKSLNPEVAIVGHVGK--GHELVGNTIVVNPGEFEE---G------RY 244 (260)
T ss_dssp SCSS-TT--CBT----T--BSCCCSCHHHHHHHHHHCCSEEEECSSCC--EEEEETTEEEEECCBGGG---T------EE
T ss_pred cccc-cc--cCc----c--cccccCcHHHHHHHHHhCCCEEEECCccC--CcEEeCCEEEEeCCCCCC---C------ce
Confidence 4310 00 000 0 00123445667777666799999999993 333456666665555431 1 56
Q ss_pred EEEEEe
Q 016429 334 RVVVAS 339 (390)
Q Consensus 334 rv~ei~ 339 (390)
-+++++
T Consensus 245 ~ii~~~ 250 (260)
T 2yvt_A 245 AFLDLT 250 (260)
T ss_dssp EEEETT
T ss_pred EEEEEc
Confidence 666654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=152.65 Aligned_cols=228 Identities=16% Similarity=0.133 Sum_probs=121.1
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHHHHHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFA 118 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~~~l~ 118 (390)
...|||+|+||+|++...... ..+. ......++.+.+.+.+++||+||++|| +++.+.+ .....+.+.+.
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~-----~~r~--~~~~~~l~~~v~~~~~~~~D~VliaGD-l~d~~~p~~~~~~~~~~~l~ 89 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNL-----DDRE--KDIYDSFKLCIKKILEIKPDVVLHSGD-LFNDLRPPVKALRIAMQAFK 89 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGC-----HHHH--HHHHHHHHHHHHHHHTTCCSEEEECSC-SBSSSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCc-----chhh--HHHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCCCCHHHHHHHHHHHH
Confidence 467999999999998532110 0000 000123455555566789999999999 5554433 34445566677
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeC
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds 198 (390)
.+.+.++|+++|+||||...........+.+.. . ...+.+ ..+.+ ..+ ..+.++.++.
T Consensus 90 ~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~---~--------v~~l~~-~~v~~-~~~---------~~v~i~gl~~ 147 (386)
T 3av0_A 90 KLHENNIKVYIVAGNHEMPRRLGEESPLALLKD---Y--------VKILDG-KDVIN-VNG---------EEIFICGTYY 147 (386)
T ss_dssp HHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTT---T--------CEECSE-EEEEE-ETT---------EEEEEEEECC
T ss_pred HHHhcCCcEEEEcCCCCCCccccccCHHHHHHH---H--------eEEcCC-CcEEE-eCC---------CCEEEEeCCC
Confidence 666668999999999998653221000000000 0 000111 11111 111 1267888876
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCC
Q 016429 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (390)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~ 278 (390)
.. .....+..+||+. +.... ....+.|+++|+|+..+.. +.. .. .
T Consensus 148 ~~----------~~~~~~~~~~l~~----l~~~~-------~~~~~~Ill~H~~~~~~~~-------~~~--~~-----~ 192 (386)
T 3av0_A 148 HK----------KSKREEMLDKLKN----FESEA-------KNYKKKILMLHQGINPYIP-------LDY--EL-----E 192 (386)
T ss_dssp CC----------STTHHHHHHHHHH----HHHHH-------HTCSSEEEEECCCCTTTSS-------SSC--SS-----C
T ss_pred CC----------HHHHHHHHHHHHH----hhhhc-------ccCCCEEEEECcCccccCC-------CCc--cc-----C
Confidence 31 1112233344432 22110 1456899999998843210 110 00 0
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCC----CCceeEEEEEec
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAG----WERRARVVVASL 340 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~----~~~g~rv~ei~~ 340 (390)
+..+ .+++++++||+|.. .....++..++++|++....++..+ ..+|+.+++++.
T Consensus 193 ---~~~l---~~~d~v~~GH~H~~-~~~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 193 ---HFDL---PKFSYYALGHIHKR-ILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp ---GGGS---CCCSEEEECSCCSC-EEEECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCS
T ss_pred ---HHHh---hhCCeEEccCCCCC-ccccCCCceEEECCcccccCcchhccccCCCCEEEEEEEec
Confidence 0111 23899999999984 4444567788888877433332211 247888888863
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=145.00 Aligned_cols=247 Identities=17% Similarity=0.164 Sum_probs=126.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC--hhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD--ATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~--~~~~~~~~~~~l~~~~ 121 (390)
|||+|+||+|++......... .... ......++.+.+.+.+++||+||++||++.+.. .......+.+.+..+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g--~~~~--~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~ 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRP--VDRR--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSC--EECH--HHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccC--cChh--HHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH
Confidence 799999999998752110000 0000 001234556666667789999999999541433 2344556667777776
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHH-HHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCC
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHI-VTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGD 200 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~ 200 (390)
+. +|+++|+||||... ..+.... ..++..... ......+.+... .+ ..+.++.+.-..
T Consensus 77 ~~-~~v~~i~GNHD~~~----~~~~~~~~~~~~~~~~~--------~~~~~~v~l~~~--~G------~~v~i~glp~~~ 135 (379)
T 3tho_B 77 RT-APVVVLPGNQDWKG----LKLFGNFVTSISSDITF--------VMSFEPVDVEAK--RG------QKVRILPFPYPD 135 (379)
T ss_dssp HH-SCEEECCCTTSCTT----HHHHHHHHHTTCSSEEE--------CCSSCCEEEECT--TC------CEEEEEEECCCC
T ss_pred hC-CCEEEEcCCCcccc----CccccccccccCCccee--------ecccceEEEEcC--CC------CEEEEEECCCCC
Confidence 56 99999999999532 1122111 111111100 000111222211 11 124566554421
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChH
Q 016429 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (390)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~ 280 (390)
... . ...+..++.+|+.+.++++...- .....+.|++.|.++....... ..+........
T Consensus 136 ~~~--~---~~~~~~~~~~~l~~~l~~~~~~~------~~~~~~~I~l~H~~v~g~~~~~-------~se~~~~~~v~-- 195 (379)
T 3tho_B 136 ESE--A---LRKNEGDFRFFLESRLNKLYEEA------LKKEDFAIFMGHFTVEGLAGYA-------GIEQGREIIIN-- 195 (379)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHHHH------HTCSSEEEEEEESCBSCCCC--------------CSCCBC--
T ss_pred HHH--H---hhhhccchHHHHHHHHHHHHHHh------cCCCCCeEEEEeccccCCccCC-------CCccccccccC--
Confidence 100 0 11144577889888776432110 0256778999999884311100 00000000000
Q ss_pred HHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEec
Q 016429 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (390)
Q Consensus 281 ~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~ 340 (390)
..++ ..+++++++||+|.... ..++..++|+|+.....++..+..+++-+++++.
T Consensus 196 --~~~~-~~~~dyvalGH~H~~q~--~~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~ 250 (379)
T 3tho_B 196 --RALI-PSVVDYAALGHIHSFRE--IQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 250 (379)
T ss_dssp --GGGS-CTTSSEEEEESCSSCEE--EEETTEEEECCCSSCCSGGGSSSCCEEEEEECCS
T ss_pred --HHHc-CcCCCEEEcccccCCeE--eCCCCcEEecCCCCCCCcccccCCCEEEEEEEcC
Confidence 1222 23699999999999521 1222467888877333344334568888888863
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-14 Score=142.25 Aligned_cols=214 Identities=14% Similarity=0.211 Sum_probs=121.3
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--------------
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-------------- 107 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~-------------- 107 (390)
.++||+++||.+...+.. ..+. .+.+.+|||||++||+|+.++..
T Consensus 115 ~~~rfa~~sc~~~~~g~~--------------------~~~~-~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~ 173 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHGYY--------------------TAYK-HMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNS 173 (527)
T ss_dssp CCEEEEEECCCCGGGCCC--------------------HHHH-HHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSS
T ss_pred CCeEEEEEecCCCCCCcc--------------------HHHH-HHHhcCCCEEEecCCcccCCCCCcccccccccccCCc
Confidence 579999999998743321 1222 33447999999999999877431
Q ss_pred -------hHHHHHHHH-----HhHhHhCCCCEEEEeCCCCCCCCCCH-----------------HHHHHHHHHcCCCccc
Q 016429 108 -------DAAKSLNAA-----FAPAIASNIPWVAVLGNHDQESTLSR-----------------EGVMKHIVTLKNTLSQ 158 (390)
Q Consensus 108 -------~~~~~~~~~-----l~~~~~~~ip~~~v~GNHD~~~~~~~-----------------~~~~~~~~~~~~~~~~ 158 (390)
++...+.+. ++.+ ...+||++++||||+..+... ..+..+++.+|.....
T Consensus 174 ~e~~tl~~yr~~y~~~~~dp~lq~~-~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~ 252 (527)
T 2yeq_A 174 AEIITLQDYRNRHAQYRSDANLKAA-HAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISS 252 (527)
T ss_dssp SSCCSHHHHHHHHHHHHTCHHHHHH-HHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGG
T ss_pred ccccCHHHHHHHHHHHhCCHHHHHH-HhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCccc
Confidence 111222221 2222 246899999999999765321 1122233332321110
Q ss_pred cCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCCCCCCC-------------CCCCCCCCHHHHHHHHHHH
Q 016429 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS-------------VPGYGWIKPSQQFWFEQTS 225 (390)
Q Consensus 159 ~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~~-------------~~~~g~i~~~q~~Wl~~~l 225 (390)
.|.. ....-+|++.+++ .+.|++||+..|..... .+....+..+|++||++.|
T Consensus 253 -~p~~---~~~~~y~sf~~G~----------lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L 318 (527)
T 2yeq_A 253 -LPNG---PDMQLYRHFTYGN----------LASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNL 318 (527)
T ss_dssp -CCBT---TBCCCCEEEEETT----------TEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHH
T ss_pred -CCCC---CCceEEEEEEcCC----------cceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHH
Confidence 1111 1112356777654 17899999976543211 0112347899999999987
Q ss_pred HHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCe--eEEEeccCCCCC
Q 016429 226 ARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV--KAVFTGHDHVND 303 (390)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v--~~v~~GH~H~~~ 303 (390)
++ ....+.||++|+|+........... ..+.+.........+.|..++.+.+| .++|+||+|...
T Consensus 319 ~~------------s~a~W~Iv~s~~p~~~~~~~~g~~~-~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 319 GS------------STAHWNVLAQQIFFAKWNFGTSASP-IYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASW 385 (527)
T ss_dssp HH------------CCSSEEEEECSSCCSCCCSSCSSSC-CEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEE
T ss_pred hc------------CCCCeEEEEeCCcccccccCCCccc-ccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHh
Confidence 74 2567999999999965311100000 00111111111223456666666667 499999999954
Q ss_pred c
Q 016429 304 F 304 (390)
Q Consensus 304 ~ 304 (390)
.
T Consensus 386 ~ 386 (527)
T 2yeq_A 386 A 386 (527)
T ss_dssp E
T ss_pred H
Confidence 3
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-14 Score=138.97 Aligned_cols=94 Identities=21% Similarity=0.320 Sum_probs=62.4
Q ss_pred eccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChh--hHHHHHH
Q 016429 37 RFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLN 114 (390)
Q Consensus 37 ~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~--~~~~~~~ 114 (390)
....++.|||+|+||+|++......... ......++.+.+.+++++||+||++|| +++...+ .....+.
T Consensus 26 ~~~~~~~mrilhiSDlHLg~~~~~~~~~--------~d~~~~l~~ll~~~~~~~~D~VliaGD-lfd~~~~~~~~~~~~~ 96 (431)
T 3t1i_A 26 ALDDENTFKILVATDIHLGFMEKDAVRG--------NDTFVTLDEILRLAQENEVDFILLGGD-LFHENKPSRKTLHTCL 96 (431)
T ss_dssp -CCGGGEEEEEEECCCCBTTTSSCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHH
T ss_pred CCCCCCCEEEEEEeccCCCCcccccchh--------hhHHHHHHHHHHHHhhcCCCEEEEcCc-cccCCCCCHHHHHHHH
Confidence 3455788999999999999754321100 001234566666777899999999999 4554332 4444555
Q ss_pred HHHhHhH---------------------------------hCCCCEEEEeCCCCCCCC
Q 016429 115 AAFAPAI---------------------------------ASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 115 ~~l~~~~---------------------------------~~~ip~~~v~GNHD~~~~ 139 (390)
+.+..+. ..++|+++|+||||....
T Consensus 97 ~~L~r~~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g 154 (431)
T 3t1i_A 97 ELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTG 154 (431)
T ss_dssp HHHHHHHBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBT
T ss_pred HHHHHHhccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCccc
Confidence 5555432 348999999999998653
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.2e-14 Score=131.62 Aligned_cols=88 Identities=22% Similarity=0.279 Sum_probs=57.3
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCC-ChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGF-DATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~-~~~~~~~~~~~~l~~~~~ 122 (390)
|||+|+||+|++...... +.... .....++.+.+.+.+++||+||++||++... ........+.+.+..+.+
T Consensus 1 mkilh~sD~Hlg~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~ 73 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE 73 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT
T ss_pred CEEEEEcccCCCCcccCC-----chhhH--HHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 799999999998532100 00000 0012345555666678999999999954432 222345556667777666
Q ss_pred CCCCEEEEeCCCCCCC
Q 016429 123 SNIPWVAVLGNHDQES 138 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~ 138 (390)
.++|+++|+||||...
T Consensus 74 ~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 74 HSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp TTCCEEEECCTTTCCS
T ss_pred CCCcEEEeCCcCCCcc
Confidence 7899999999999864
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=137.11 Aligned_cols=244 Identities=15% Similarity=0.174 Sum_probs=120.1
Q ss_pred ccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh--HHHHHHH
Q 016429 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNA 115 (390)
Q Consensus 38 ~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~--~~~~~~~ 115 (390)
..+...|||+|+||+|++......... ......++.+.+.+.+++||+||++|| +++...+. ....+.+
T Consensus 8 ~~~~~~mrilhiSDlHLg~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 8 LHNENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALR 78 (417)
T ss_dssp --CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHHH
T ss_pred CCCCCCeEEEEEEcCCCCCcccccccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHH
Confidence 355678999999999999754321100 011234566677777899999999999 55554332 2223333
Q ss_pred HHhH------------hH---------------------hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCC
Q 016429 116 AFAP------------AI---------------------ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162 (390)
Q Consensus 116 ~l~~------------~~---------------------~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~ 162 (390)
.+.. +. ..++|+++++||||...........+.+.. +.....++..
T Consensus 79 ~lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~-~g~v~l~g~~ 157 (417)
T 4fbw_A 79 SLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQV-TGLVNYFGRV 157 (417)
T ss_dssp HHHHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHH-TTSCEECCCC
T ss_pred HHHHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhcc-CCeEEEeCCc
Confidence 3333 11 248999999999998543211111222222 2211112211
Q ss_pred CCccccCccc--eeEEeccCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccC
Q 016429 163 DAHIIDGFGN--YNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQK 240 (390)
Q Consensus 163 ~~~~~~g~~~--y~~~~~~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~ 240 (390)
. ....+.- ..+..+ ...+.++.+.. +..+. +.+...+-...+- .+....
T Consensus 158 ~--~~~~i~~~pv~l~~g---------~~~valyG~~~--------------~~d~r---l~r~~~~~~v~~~-~p~~~~ 208 (417)
T 4fbw_A 158 P--ENDNIVVSPILLQKG---------FTKLALYGISN--------------VRDER---LYHSFRENKVKFL-RPDLYR 208 (417)
T ss_dssp C-----CEEECCEEEEET---------TEEEEEEEECC--------------CCHHH---HHHHHHTTCEEEE-EESTTT
T ss_pred c--cCCceeEEeEEEEec---------CceEEEEeccC--------------Cchhh---hhhhhhhhhhhhc-Cccccc
Confidence 0 0000000 011111 11244554443 44433 2221111000000 011112
Q ss_pred CCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCccc---ccCCeEEEecC
Q 016429 241 APAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCG---RLTGIQLCYGG 317 (390)
Q Consensus 241 ~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~---~~~gi~~~~~~ 317 (390)
.....|++.|....... . ...+. ..++.. ++++|++||+|...... ..+|.++++.|
T Consensus 209 ~~~~nIlvlH~~~~~~~---------~-~~yip---------~~l~~~-~~DyvalGH~H~~~~~~~~~~~~g~~i~~PG 268 (417)
T 4fbw_A 209 DEWFNLLTVHQNHSAHT---------P-TSYLP---------ESFIQD-FYDFVLWGHEHECLIDGSYNPTQKFTVVQPG 268 (417)
T ss_dssp TTSEEEEEEESCSSCSS---------S-SSSCC---------GGGSCT-TCSEEEEESCCSCEEEEEEETTTTEEEEECC
T ss_pred CCceEEEEecCCccCCC---------C-cccCc---------hhHhhc-CCCEEEecCccccceeccccCCCCEEEEECC
Confidence 45679999998774310 0 01111 223344 59999999999954332 24678888888
Q ss_pred CCCCCCCCC-CCCCceeEEEEEec
Q 016429 318 GFGYHAYGK-AGWERRARVVVASL 340 (390)
Q Consensus 318 ~~g~~~~~~-~~~~~g~rv~ei~~ 340 (390)
++.-..... ..-.+++-+++|+.
T Consensus 269 S~~~~s~~e~E~~~kg~~lvei~~ 292 (417)
T 4fbw_A 269 STIATSLSPGETAPKHCGILNITG 292 (417)
T ss_dssp CSSCSSCCHHHHSCCEEEEEEEET
T ss_pred CCCcCCCccccCCCCEEEEEEEEC
Confidence 764222210 01257899999973
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.1e-14 Score=121.58 Aligned_cols=59 Identities=10% Similarity=-0.089 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEe
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVAS 339 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~ 339 (390)
..+..+++..+++++++||+|.. .....+|+.++..|+.+..- .......++|.+++++
T Consensus 107 ~~l~~~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~ 166 (192)
T 1z2w_A 107 ASLALLQRQFDVDILISGHTHKF-EAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQ 166 (192)
T ss_dssp HHHHHHHHHHSSSEEECCSSCCC-EEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCcCcC-ccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEE
Confidence 34555655557999999999994 45556888888877765321 1111235789999987
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.5e-14 Score=133.84 Aligned_cols=91 Identities=24% Similarity=0.335 Sum_probs=58.7
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh--HHHHHHHHH
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAF 117 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~--~~~~~~~~l 117 (390)
..+.|||+|+||+|++......... ......++.+.+.+.+++||+||++|| +++.+.+. ....+.+.+
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~ps~~a~~~~~~~L 143 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALRSL 143 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-SBSSSSCCHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHHHH
Confidence 3577999999999998654321100 001234566777777899999999999 55554432 222233333
Q ss_pred hH------------h---------------------HhCCCCEEEEeCCCCCCCC
Q 016429 118 AP------------A---------------------IASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 118 ~~------------~---------------------~~~~ip~~~v~GNHD~~~~ 139 (390)
.. + ...++|+++++||||....
T Consensus 144 r~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~ 198 (472)
T 4fbk_A 144 RLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 198 (472)
T ss_dssp HHHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC
T ss_pred HHhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccc
Confidence 32 1 1248999999999998654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-13 Score=118.25 Aligned_cols=59 Identities=14% Similarity=-0.034 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCC-CCCCCCceeEEEEEe
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-GKAGWERRARVVVAS 339 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~-~~~~~~~g~rv~ei~ 339 (390)
..+..+++..+++++++||+|.. .....+|+.++..|+.+..-. ...+..++|.+++++
T Consensus 131 ~~l~~~~~~~~~d~vl~GHtH~~-~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~ 190 (215)
T 2a22_A 131 GSLEQWQRRLDCDILVTGHTHKL-RVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQ 190 (215)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCC-EEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCcCCC-ccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEe
Confidence 44556665557999999999994 445568888887777653211 112245789999987
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-14 Score=130.89 Aligned_cols=81 Identities=9% Similarity=0.038 Sum_probs=48.6
Q ss_pred CCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCCcccccCCeEEEecCCCCC
Q 016429 243 APGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321 (390)
Q Consensus 243 ~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~ 321 (390)
...|+++|+++... .+ +.. .+..+.+.+..+++.. ++++++|||+|. ......+|+.++..|+.+.
T Consensus 131 ~~~i~~~H~~p~~~--~~---------~~~-~~~~~~~~l~~~~~~~~~~~~vi~GHtH~-~~~~~~~~~~~in~Gs~~~ 197 (252)
T 1nnw_A 131 GNEVFGVYGSPINP--FD---------GEV-LAEQPTSYYEAIMRPVKDYEMLIVASPMY-PVDAMTRYGRVVCPGSVGF 197 (252)
T ss_dssp TEEEEEESSCSSCT--TT---------CCC-CSSCCHHHHHHHHGGGTTSSEEEESTTCS-EEEEEETTEEEEEECCSSS
T ss_pred CcEEEEEcCCCCCC--cc---------ccc-CCCCCHHHHHHHHhcCCCCCEEEECCccc-cceEecCCeEEEECCCccC
Confidence 35799999876221 10 000 0112345566777665 799999999999 4555678888777777664
Q ss_pred CCCCCCCCCceeEEEEE
Q 016429 322 HAYGKAGWERRARVVVA 338 (390)
Q Consensus 322 ~~~~~~~~~~g~rv~ei 338 (390)
.-.+ ....+|-++++
T Consensus 198 ~~~~--~~~~~y~il~~ 212 (252)
T 1nnw_A 198 PPGK--EHKATFALVDV 212 (252)
T ss_dssp CSSS--SCCEEEEEEET
T ss_pred CCCC--CCcceEEEEEC
Confidence 3222 12345555554
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-13 Score=122.72 Aligned_cols=67 Identities=18% Similarity=0.258 Sum_probs=46.6
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
.+.|||+++||+|..... + +..++|+||++|| +++.+..+..+.+.+.++.
T Consensus 57 ~~~mri~~iSD~H~~~~~-----------------------l----~i~~~D~vi~aGD-l~~~g~~~e~~~~~~~L~~- 107 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG-----------------------I----QMPYGDILLHTGD-FTELGLPSEVKKFNDWLGN- 107 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT-----------------------C----CCCSCSEEEECSC-CSSSCCHHHHHHHHHHHHT-
T ss_pred CCCeEEEEEeeCCCCcch-----------------------h----ccCCCCEEEECCc-ccCCCCHHHHHHHHHHHHh-
Confidence 466999999999965321 0 1257999999999 5665554444455555553
Q ss_pred HhCC-CCEEEEeCCCCCCC
Q 016429 121 IASN-IPWVAVLGNHDQES 138 (390)
Q Consensus 121 ~~~~-ip~~~v~GNHD~~~ 138 (390)
.. .++++|+||||...
T Consensus 108 --l~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 108 --LPYEYKIVIAGNHELTF 124 (296)
T ss_dssp --SCCSEEEECCCTTCGGG
T ss_pred --CCCCeEEEEcCCccccc
Confidence 33 46899999999854
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-14 Score=130.41 Aligned_cols=205 Identities=12% Similarity=0.034 Sum_probs=110.0
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhH
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~ 119 (390)
.....||++|||+|.. ...++.+.+.++..++|.|+++||++.....+ . .+.+.+.
T Consensus 8 ~~~~~~i~~iSDiHg~--------------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~--~-~~~~~l~- 63 (270)
T 3qfm_A 8 HMDMTKIALLSDIHGN--------------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR--R-RILDLLD- 63 (270)
T ss_dssp ---CEEEEEECCCTTC--------------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS--H-HHHHHHH-
T ss_pred cccccEEEEEecCCCC--------------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH--H-HHHHHHH-
Confidence 3567999999999932 23445566666677999999999955433322 1 2223333
Q ss_pred hHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCC
Q 016429 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~ 199 (390)
+. .|+++|+||||.. +.+.... . ..... ....+. .. ..
T Consensus 64 --~~-~~~~~v~GNhD~~-------~~~~~~~---~---~~~~~-----~~~~~~---~~------------------~~ 101 (270)
T 3qfm_A 64 --QL-PITARVLGNWEDS-------LWHGVRK---E---LDSTR-----PSQRYL---LR------------------QC 101 (270)
T ss_dssp --TS-CEEEECCCHHHHH-------HHHHHTT---C---SCTTS-----HHHHHH---HH------------------HH
T ss_pred --cc-CCEEEEcCChHHH-------HHHhhcc---c---cCCCc-----HHHHHH---HH------------------HH
Confidence 22 3789999999962 1111100 0 00000 000000 00 00
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCCh
Q 016429 200 DYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNS 279 (390)
Q Consensus 200 ~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~ 279 (390)
.+ ....+++++++||++.-..+. ..-+...|+++|..+.. .+ .+.+ .+....
T Consensus 102 ~~-------~~~~L~~~~~~~L~~LP~~~~---------~~~~g~~i~lvHg~p~~---~~--------~~~~-~~~~~~ 153 (270)
T 3qfm_A 102 QY-------VLEEISLEEIEVLHNQPLQIH---------RQFGDLTVGISHHLPDK---NW--------GREL-IHTGKQ 153 (270)
T ss_dssp HH-------HHTTSCHHHHHHHHSCCSEEE---------EEETTEEEEEESSBTTB---SS--------SSTT-STTCCH
T ss_pred HH-------HHHHcCHHHHHHHHhCCCceE---------EEECCcEEEEEECCCCC---CC--------Ccee-cCCCcH
Confidence 00 012377889999875311000 00133478889975421 11 0111 112234
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccc-cCCeEEEecCCCCCCCCCCC----CCCceeEEEEEe
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGR-LTGIQLCYGGGFGYHAYGKA----GWERRARVVVAS 339 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~-~~gi~~~~~~~~g~~~~~~~----~~~~g~rv~ei~ 339 (390)
+.+..++...++++++|||+|.. .... .+|+.++..|+.|....+.+ +....|-+++++
T Consensus 154 ~~l~~~~~~~~~d~~i~GHtH~~-~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~ 217 (270)
T 3qfm_A 154 EEFDRLVTHPPCDIAVYGHIHQQ-LLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFD 217 (270)
T ss_dssp HHHHHTTTTTTCSEEECCSSCSE-EEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEE
T ss_pred HHHHHHhcccCCCEEEECCcCch-HheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEec
Confidence 56677776668999999999984 4444 47888888888875433321 124567777776
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.8e-13 Score=114.00 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=44.3
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhH
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~ 119 (390)
-++.|||+++||+|.. ...++.+.+.++..++|+|+++||+ .+. + .++.
T Consensus 22 ~~g~m~i~~iSD~Hg~--------------------~~~l~~~l~~~~~~~~D~ii~~GDl-~~~---~-------~~~~ 70 (190)
T 1s3l_A 22 FQGHMKIGIMSDTHDH--------------------LPNIRKAIEIFNDENVETVIHCGDF-VSL---F-------VIKE 70 (190)
T ss_dssp ----CEEEEECCCTTC--------------------HHHHHHHHHHHHHSCCSEEEECSCC-CST---H-------HHHH
T ss_pred hcCCeEEEEEeeCCCC--------------------HHHHHHHHHHHhhcCCCEEEECCCC-CCH---H-------HHHH
Confidence 3566999999999921 1234455556666899999999995 431 1 2222
Q ss_pred hHhCCCCEEEEeCCCCCC
Q 016429 120 AIASNIPWVAVLGNHDQE 137 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~ 137 (390)
+.+.+.|+++|+||||..
T Consensus 71 l~~l~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 71 FENLNANIIATYGNNDGE 88 (190)
T ss_dssp GGGCSSEEEEECCTTCCC
T ss_pred HHhcCCCEEEEeCCCcch
Confidence 333468999999999974
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.42 E-value=7.2e-12 Score=105.92 Aligned_cols=74 Identities=15% Similarity=-0.010 Sum_probs=49.7
Q ss_pred CeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCC
Q 016429 244 PGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA 323 (390)
Q Consensus 244 ~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~ 323 (390)
..|+++|+|+... + .+...+..+++..+++++++||+|. ......+|+.++..|+.+..-
T Consensus 78 ~~i~~~Hg~~~~~---~----------------~~~~~l~~~~~~~~~d~vi~GHtH~-~~~~~~~~~~~inpGs~~~~~ 137 (176)
T 3ck2_A 78 TKIIQTHGHLFDI---N----------------FNFQKLDYWAQEEEAAICLYGHLHV-PSAWLEGKILFLNPGSISQPR 137 (176)
T ss_dssp EEEEEECSGGGTT---T----------------TCSHHHHHHHHHTTCSEEECCSSCC-EEEEEETTEEEEEECCSSSCC
T ss_pred eEEEEECCCccCC---C----------------CCHHHHHHHHHhcCCCEEEECCcCC-CCcEEECCEEEEECCCCCcCC
Confidence 4788999877431 1 1234456666667899999999999 455557888888777765432
Q ss_pred CCCCCCCceeEEEEEe
Q 016429 324 YGKAGWERRARVVVAS 339 (390)
Q Consensus 324 ~~~~~~~~g~rv~ei~ 339 (390)
.+ ...++|.+++++
T Consensus 138 ~~--~~~~~y~il~~~ 151 (176)
T 3ck2_A 138 GT--IRECLYARVEID 151 (176)
T ss_dssp TT--CCSCCEEEEEEC
T ss_pred CC--CCCCeEEEEEEc
Confidence 11 123689999986
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.4e-13 Score=119.21 Aligned_cols=95 Identities=17% Similarity=0.106 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHcCCee
Q 016429 213 IKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVK 292 (390)
Q Consensus 213 i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~ 292 (390)
+.+++++||++. ... .....++++|.++... .+ +. ..+...+..+++..+++
T Consensus 93 l~~~~~~~L~~l----p~~---------~~~~~i~~~Hg~p~~~--~~---------~~----~~~~~~~~~~l~~~~~~ 144 (246)
T 3rqz_A 93 LQAEHLQYLESL----PNR---------MIDGDWTVVHGSPRHP--IW---------EY----IYNARIAALNFPAFDTP 144 (246)
T ss_dssp CCHHHHHHHHHC----CSE---------EEETTEEEESSCSSST--TT---------CC----CCSHHHHHHHGGGCCSS
T ss_pred cCHHHHHHHHhC----CcE---------EEECCEEEEECCcCCc--cc---------cc----cCChHHHHHHHhccCCC
Confidence 677889998753 110 1123688999866321 00 01 01334456677777899
Q ss_pred EEEeccCCCCCcccc---------------------cCCeEEEecCCCCCCCCCCCCCCceeEEEEE
Q 016429 293 AVFTGHDHVNDFCGR---------------------LTGIQLCYGGGFGYHAYGKAGWERRARVVVA 338 (390)
Q Consensus 293 ~v~~GH~H~~~~~~~---------------------~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei 338 (390)
++||||+|.+ +... ..|..++..|+.|..-.|. ...+|-++++
T Consensus 145 l~i~GHtH~p-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg~--p~A~Y~i~d~ 208 (246)
T 3rqz_A 145 LCFVGHTHVP-LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGD--PRASYAIFEP 208 (246)
T ss_dssp EEECCSSSSE-EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSSC--CSEEEEEEEG
T ss_pred EEEECCcCcc-cEEEecccccccccccccccceeecCCCeEEEECCccCCCCCcC--CcceEEEEEC
Confidence 9999999984 3322 2367777888877533222 2235555554
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=7.8e-12 Score=108.58 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=47.0
Q ss_pred CCcceeccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCCh---hh
Q 016429 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA---TD 108 (390)
Q Consensus 32 ~~~~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~---~~ 108 (390)
.++.+.|.+...|||+++||+|... ..++.+.+.++..++|+|+++||++..... ..
T Consensus 14 ~~~~~~~~~~~mmki~~iSD~H~~~--------------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~ 73 (208)
T 1su1_A 14 GTENLYFQSNAMMKLMFASDIHGSL--------------------PATERVLELFAQSGAQWLVILGDVLNHGPRNALPE 73 (208)
T ss_dssp -----------CCEEEEECCCTTBH--------------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCT
T ss_pred CcccceecccccEEEEEEEcCCCCH--------------------HHHHHHHHHHHhcCCCEEEECCCccccCccccccc
Confidence 3456667767779999999999531 234555566666789999999995543221 00
Q ss_pred --HHHHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 109 --AAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 109 --~~~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
....+.+.+. +.+.|+++|+||||.
T Consensus 74 ~~~~~~~~~~l~---~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 74 GYAPAKVVERLN---EVAHKVIAVRGNCDS 100 (208)
T ss_dssp TBCHHHHHHHHH---TTGGGEEECCCTTCC
T ss_pred ccCHHHHHHHHH---hcCCceEEEECCCch
Confidence 0122333443 345799999999997
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.6e-12 Score=108.99 Aligned_cols=81 Identities=16% Similarity=0.133 Sum_probs=49.8
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
.|||+++||+|++....... ..+. ......+.+.+.+++ .++|+|+++||++.. + ++ ...+.+.++.
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~-~~~~------~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~-~-~~-~~~~~~~l~~- 69 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINL-NPEV------RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWH-F-ND-KNEYLRIWKA- 69 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHH-STTT------CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSC-S-CC-TTSHHHHHHH-
T ss_pred CcEEEEEeccccCCCccccc-cCCC------CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCC-c-hh-HHHHHHHHHH-
Confidence 47899999999975431100 0000 012344566666665 489999999995543 2 11 1223344443
Q ss_pred HhCCCCEEEEeCCCCC
Q 016429 121 IASNIPWVAVLGNHDQ 136 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~ 136 (390)
.+.|+++|+||||.
T Consensus 70 --l~~~~~~v~GNhD~ 83 (195)
T 1xm7_A 70 --LPGRKILVMGNHDK 83 (195)
T ss_dssp --SSSEEEEECCTTCC
T ss_pred --CCCCEEEEeCCCCC
Confidence 45689999999997
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.8e-10 Score=113.26 Aligned_cols=212 Identities=15% Similarity=0.076 Sum_probs=103.4
Q ss_pred CCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHh
Q 016429 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFA 118 (390)
Q Consensus 40 ~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~ 118 (390)
...+++|+|+||+|...... .+.. .... .+......++.+.+.++++.|| ++|.+||++.+... .....-...+.
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~-~~~~-~~~~-~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~-~~~~~~~~~~~ 101 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPV-ELTL-SGEK-TPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY-FNQYRGLADRY 101 (552)
T ss_dssp --CEEEEEEECCCTTCCSCE-EEEC-SSSE-EEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-HHHHTTHHHHH
T ss_pred CCeeEEEEEEcccccCcccc-cccC-cccc-cccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-HHHhCCcHHHH
Confidence 34679999999999643221 0000 0000 0012333445556666677888 89999996654321 11111112333
Q ss_pred HhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCC--CCCccccC-ccce-eEEeccCCCCCCCCcceEEEE
Q 016429 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--SDAHIIDG-FGNY-NLEIGGVKGSGFENKSVLNLY 194 (390)
Q Consensus 119 ~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g-~~~y-~~~~~~~~~~~~~~~~~~~l~ 194 (390)
.+...+.. ++++||||+... .+.+.+++......+-.-+- .+.....+ ...| .+.+.+ ..+.++
T Consensus 102 ~ln~lg~d-~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G---------~kIgii 169 (552)
T 2z1a_A 102 FMHRLRYR-AMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGG---------ERVGII 169 (552)
T ss_dssp HHHHTTCC-EEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETT---------EEEEEE
T ss_pred HHHhcCCC-ccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECC---------EEEEEE
Confidence 33345555 678999999753 45666666543322111010 00000000 1123 233333 125677
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCC
Q 016429 195 FLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISS 274 (390)
Q Consensus 195 ~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~ 274 (390)
.+.+...... ..+..++.-.+..+-+++.+++++++ ....+|++.|.|....
T Consensus 170 G~~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~l~~~---------~~d~iIvL~H~g~~~d------------------ 221 (552)
T 2z1a_A 170 GLTTPDTREI-SNPGPTVAFLDPYESAQKAVYELLAK---------GVNKIVVLSHLGYGED------------------ 221 (552)
T ss_dssp EEECTTHHHH-SCCCTTCEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH------------------
T ss_pred Eecccchhhc-cCCCCCcEECCHHHHHHHHHHHHHhc---------CCCEEEEEeCCCcchH------------------
Confidence 7776321000 00001111111233355555555532 5678999999998431
Q ss_pred CCCChHHHHHHHHc-CCeeEEEeccCCCCC
Q 016429 275 ASVNSGFFTTMVAA-GDVKAVFTGHDHVND 303 (390)
Q Consensus 275 ~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~ 303 (390)
..+.+. .+|++|++||.|...
T Consensus 222 --------~~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 222 --------LKLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp --------HHHHTTCSSCCEEEECSSCCCB
T ss_pred --------HHHHHhCCCccEEEeCCcCccc
Confidence 123322 479999999999843
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.2e-11 Score=99.77 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=30.8
Q ss_pred CCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 289 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 289 ~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
.+++++++||+|.. .....+|+.++..|+.+. ++|-+++++
T Consensus 127 ~~~d~vi~GHtH~~-~~~~~~~~~~iNpGS~~~---------~sy~il~~~ 167 (178)
T 2kkn_A 127 EKPQVILFGHTHEP-EDTVKAGVRFLNPGSLAE---------GSYAVLELD 167 (178)
T ss_dssp SCCSEEECCSCSSC-CEEEETTEEEECCCCTTT---------TEEEEEEEE
T ss_pred cCCCEEEECccCCC-CeEEeCCEEEEECCCCCC---------CeEEEEEEC
Confidence 46899999999994 455567887776666542 578888887
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.5e-08 Score=100.03 Aligned_cols=95 Identities=17% Similarity=0.107 Sum_probs=50.9
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc----CC-CEEEEcCCcCCCCChhh--HHHHHH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE----KP-DLIVFTGDNIFGFDATD--AAKSLN 114 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~----~p-D~Vv~~GD~i~~~~~~~--~~~~~~ 114 (390)
..++|+|+||+|........ .+.....++.+.+.++++ +| +++|.+||++.+..... ..+...
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~----------~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~ 76 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEY----------GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDF 76 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTT----------SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHH
T ss_pred eEEEEEEecccccCccCCCC----------CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHH
Confidence 46999999999975322100 011222333344444332 46 79999999654332111 011222
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHc
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (390)
+.+. ..+.. ++++||||+... .+.+.+.+...
T Consensus 77 ~~ln---~lg~d-~~~~GNHEfd~g--~~~l~~~~~~~ 108 (516)
T 1hp1_A 77 RGMN---LVGYD-AMAIGNHEFDNP--LTVLRQQEKWA 108 (516)
T ss_dssp HHHH---HHTCC-EEECCGGGGSSC--HHHHHHHHHHC
T ss_pred HHHh---ccCCC-EEeeccccccCC--HHHHHHHHhhC
Confidence 3333 34544 678999999654 34555555543
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=99.02 E-value=8.6e-09 Score=102.43 Aligned_cols=193 Identities=12% Similarity=0.058 Sum_probs=91.6
Q ss_pred hhHHHHHHHHHHhc--C--CC-EEEEcCCcCCCCChhhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHH
Q 016429 76 LNTTAFINRMISAE--K--PD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIV 150 (390)
Q Consensus 76 ~~~~~~l~~~i~~~--~--pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~ 150 (390)
...++.+.+.++++ + || ++|.+||++.+... .....-...+..+...+.+++ + ||||+... .+.+.+++.
T Consensus 104 ~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G--~~~l~~~l~ 178 (562)
T 2wdc_A 104 MGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLG--RERVEELLG 178 (562)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGC--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhCCcEE-e-cchhcccC--HHHHHHHHH
Confidence 33344455555554 4 89 99999996654321 111111222333334577875 6 99998543 456666666
Q ss_pred HcCCCccccCCCCCc-cccCcccee-EEeccCCCCCCCCcceEEEEEEeCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
Q 016429 151 TLKNTLSQVNPSDAH-IIDGFGNYN-LEIGGVKGSGFENKSVLNLYFLDSGDYS-TVPSVPGYGWIKPSQQFWFEQTSAR 227 (390)
Q Consensus 151 ~~~~~~~~~~p~~~~-~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~lds~~~~-~~~~~~~~g~i~~~q~~Wl~~~l~~ 227 (390)
.....+-.-+-.... ...-...|. +.+.+ ..+.++.+.+.... ..+.....++.-....+-+++.+++
T Consensus 179 ~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G---------~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 249 (562)
T 2wdc_A 179 LFRGEFLSYNIVDDLFGDPLFPAYRIHRVGP---------YALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDK 249 (562)
T ss_dssp HCCSEECCSSCEETTTCCBSSCSEEEEEETT---------EEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHH
T ss_pred hCCCCEEEEEEEecCCCCcccCCeEEEEECC---------eEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHH
Confidence 543221111100000 000011232 23333 12566777652100 0000000111111112334555555
Q ss_pred HHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCCccc
Q 016429 228 LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCG 306 (390)
Q Consensus 228 l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~~~~ 306 (390)
++++ ....+|++.|.|.... ..+.+. .+|++||+||.|....+.
T Consensus 250 l~~~---------~~d~iIvLsH~g~~~d--------------------------~~la~~~~giDlIlgGHtH~~~~~~ 294 (562)
T 2wdc_A 250 ARAE---------GANAVVLLSHNGMQLD--------------------------AALAERIRGIDLILSGHTHDLTPRP 294 (562)
T ss_dssp HHHT---------TCSEEEEEECSCHHHH--------------------------HHHHTTSSSCCEEEECSSCCCCSSC
T ss_pred HHHC---------CCCEEEEEeCCCCcch--------------------------HHHHhcCCCCcEEEeCCCCCCCccC
Confidence 5532 4567999999997431 123332 479999999999843222
Q ss_pred -ccCCeEEEecC
Q 016429 307 -RLTGIQLCYGG 317 (390)
Q Consensus 307 -~~~gi~~~~~~ 317 (390)
..+++.++.++
T Consensus 295 ~~~~~t~vvqag 306 (562)
T 2wdc_A 295 WRVGKTWIVAGS 306 (562)
T ss_dssp EEETTEEEEECC
T ss_pred EEECCEEEEecC
Confidence 12565555443
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-08 Score=98.50 Aligned_cols=241 Identities=14% Similarity=0.064 Sum_probs=113.8
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHH----HHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKS----LNA 115 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~----~~~ 115 (390)
..+++|+|+||+|-.-.+.. +.+..+ .+......++.+.+.++++.|+ ++|.+||++.+......... ...
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~-~~~~~~---~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~ 92 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTD-FTSRNQ---YQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQP 92 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCC-SSSTTC---CCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHH
T ss_pred CCcEEEEEEeccCCCccCcc-cccCCC---cCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcch
Confidence 46799999999995432211 110000 0112333445555555666776 77789996544321111100 123
Q ss_pred HHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCC-CccccCccceeEEeccCCCCCCCCcceEEEE
Q 016429 116 AFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSD-AHIIDGFGNYNLEIGGVKGSGFENKSVLNLY 194 (390)
Q Consensus 116 ~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~ 194 (390)
.+..+...+..+ +++||||+... .+.+.+++......+-.-+-.. .....+..+..+.+.| ..+-++
T Consensus 93 ~~~~ln~lg~D~-~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G---------~kIgvi 160 (527)
T 3qfk_A 93 LVDFYNRMAFDF-GTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGD---------QTVGVI 160 (527)
T ss_dssp HHHHHHHTCCCE-ECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETT---------EEEEEE
T ss_pred HHHHHHhcCCcE-EeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECC---------EEEEEE
Confidence 344444567664 56999998654 4566666665433221100000 0000011112223333 225677
Q ss_pred EEeCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCC
Q 016429 195 FLDSGDYSTVPSVP--GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (390)
Q Consensus 195 ~lds~~~~~~~~~~--~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~ 272 (390)
.+.+..... ...+ ..++.-.+..+.+++.++++++ ....+|+++|.+..... ..|...+..
T Consensus 161 G~~~~~~~~-~~~~~~~~g~~~~d~~~~~~~~v~~l~~----------~~D~iIvl~H~G~~~d~------~~~~~~~~~ 223 (527)
T 3qfk_A 161 GLTTQFIPH-WEQPEHIQSLTFHSAFEILQQYLPEMKR----------HADIIVVCYHGGFEKDL------ESGTPTEVL 223 (527)
T ss_dssp EEECTTGGG-TSCHHHHTTEEECCHHHHHHHHHHHHHH----------HCSEEEEEEECCCSBCT------TTCCBSSCC
T ss_pred EeccCCccc-ccCccccCCcEEcCHHHHHHHHHHHHHh----------CCCEEEEEeCcCccccc------ccCcccccc
Confidence 776631100 0000 0122222345566676666653 45678999997763210 011111110
Q ss_pred CCCCCCh-HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCC
Q 016429 273 SSASVNS-GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (390)
Q Consensus 273 ~~~~~~~-~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (390)
. ..+. ..+..-+. .+|++|++||.|. ......+++.++.++.
T Consensus 224 ~--~e~~~~~la~~~~-~giDlIlgGHtH~-~~~~~v~~~~ivqag~ 266 (527)
T 3qfk_A 224 T--GENEGYAMLEAFS-KDIDIFITGHQHR-QIAERFKQTAVIQPGT 266 (527)
T ss_dssp S--SSCCHHHHHHHHG-GGCSEEECCSSCC-EEEEEETTEEEEEECS
T ss_pred c--cchHHHHHHHhcC-CCCcEEEECCCCc-ccceEECCEEEeccCh
Confidence 0 0111 12222222 4699999999998 4445567877776543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=9.1e-09 Score=102.20 Aligned_cols=212 Identities=17% Similarity=0.114 Sum_probs=101.1
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
-+++|+|+||+|..................+......+..+.+.++++.| +++|.+||++.+... .....-...+..+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-FTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh-hhhhCChHHHHHH
Confidence 46999999999954332110000000000011234445555566666777 599999996654421 1111112233333
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHH-HHHHHcCCCccccCCCCCc--c--cc-Ccccee-EEeccCCCCCCCCcceEEE
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVM-KHIVTLKNTLSQVNPSDAH--I--ID-GFGNYN-LEIGGVKGSGFENKSVLNL 193 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~--~--~~-g~~~y~-~~~~~~~~~~~~~~~~~~l 193 (390)
...+.. ++++||||+... .+.+. +++......+..-+-.... . .. ....|. +.+.| ..+-+
T Consensus 103 n~lg~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G---------~kIgi 170 (546)
T 4h2g_A 103 NALRYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGD---------EVVGI 170 (546)
T ss_dssp HHHTCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETT---------EEEEE
T ss_pred HhcCCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECC---------EEEEE
Confidence 345666 577999998543 23344 3333222111000000000 0 00 011232 23332 22556
Q ss_pred EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCC
Q 016429 194 YFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGIS 273 (390)
Q Consensus 194 ~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~ 273 (390)
+.+.+..... ...+..++.-.+..+.+++.+++++++ ....+|+++|.+....
T Consensus 171 iG~~~~~~~~-~~~~~~~~~~~d~~~~~~~~v~~l~~~---------g~D~iI~l~H~g~~~d----------------- 223 (546)
T 4h2g_A 171 VGYTSKETPF-LSNPGTNLVFEDEITALQPEVDKLKTL---------NVNKIIALGHSGFEMD----------------- 223 (546)
T ss_dssp EEEECTTHHH-HSCCCSSEEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH-----------------
T ss_pred EEeccccccc-ccCCCCCcEEccHHHHHHHHHHHHHhc---------CCCEEEEEeccCccch-----------------
Confidence 7776621100 000000222223455677777777652 4678999999987431
Q ss_pred CCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 016429 274 SASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (390)
Q Consensus 274 ~~~~~~~~~~~l~~-~~~v~~v~~GH~H~~ 302 (390)
..+.+ -.+|++|++||.|..
T Consensus 224 ---------~~la~~~~giDlIlgGHtH~~ 244 (546)
T 4h2g_A 224 ---------KLIAQKVRGVDVVVGGHSNTF 244 (546)
T ss_dssp ---------HHHHHHSTTCCEEECCSSCCC
T ss_pred ---------HHHHHhCCCCcEEEeCCcCcc
Confidence 11221 246999999999983
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-07 Score=93.40 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=55.6
Q ss_pred CCeEEEEEecccccCCCCC-CCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCcCCCCChhhHHHHHHHHHhH
Q 016429 42 GEFKILQVADMHFANGKTT-PCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKSLNAAFAP 119 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~-~GD~i~~~~~~~~~~~~~~~l~~ 119 (390)
.+++|+++||+|-.-.+.. .+.+ ....+......++.+.+.++++.|+.+++ +||++.+. .......-...+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~---~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ 80 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIA---DGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDI 80 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSG---GGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHH
T ss_pred eEEEEEEEccccCCccCccccccc---CCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHH
Confidence 4689999999995432211 0000 00011123444555666667788998877 99965532 11111111223333
Q ss_pred hHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHc
Q 016429 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTL 152 (390)
Q Consensus 120 ~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~ 152 (390)
+...+.. ++++||||+..+ .+.+.+++...
T Consensus 81 ln~lg~D-~~tlGNHEfd~G--~~~l~~~l~~~ 110 (509)
T 3ive_A 81 MNTMPFD-AVTIGNHEFDHG--WDNTLLQLSQA 110 (509)
T ss_dssp HTTSCCS-EECCCGGGGTTC--HHHHHHHHTTC
T ss_pred HHhcCCc-EEeecccccccC--HHHHHHHHhhC
Confidence 3335555 556899998654 44566665543
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.9e-08 Score=98.27 Aligned_cols=210 Identities=18% Similarity=0.194 Sum_probs=101.2
Q ss_pred CCCeEEEEEecccccCCCCC-----CCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHH
Q 016429 41 NGEFKILQVADMHFANGKTT-----PCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLN 114 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~ 114 (390)
.-+++|+|++|+|-.-.+.. .+.+ ...+......+..+.+.++++.|+ ++|.+||++.+... .....-.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~----~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~-~~~~~g~ 84 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQ----TKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLY-FTLFGGS 84 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEE----EEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHH-HHTTTTH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcc----cccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcee-eeecCCH
Confidence 34699999999994432210 0000 000112333445555556666776 89999996654311 1000001
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCC--CCCccccC-cccee-EEeccCCCCCCCCcce
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP--SDAHIIDG-FGNYN-LEIGGVKGSGFENKSV 190 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g-~~~y~-~~~~~~~~~~~~~~~~ 190 (390)
..+..|...+..+ +++||||+... .+.+.+++......+..-+- .......+ +..|. +.+.| ..
T Consensus 85 ~~~~~ln~lg~D~-~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G---------~k 152 (579)
T 3ztv_A 85 ADAAVMNAGNFHY-FTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDG---------EK 152 (579)
T ss_dssp HHHHHHHHHTCSE-EECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETT---------EE
T ss_pred HHHHHHHhcCcCe-eeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECC---------EE
Confidence 1222233356665 67899998543 45566666543322111000 00000001 11233 23333 22
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCC
Q 016429 191 LNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (390)
Q Consensus 191 ~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e 270 (390)
+-++.+.+.........+..++.-.+..+-+++.+.+++++ ....+|+++|.+....
T Consensus 153 IgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~---------g~d~iI~l~H~G~~~d-------------- 209 (579)
T 3ztv_A 153 IAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQ---------GINKIILLSHAGSEKN-------------- 209 (579)
T ss_dssp EEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTT---------TCCCEEEEEETCHHHH--------------
T ss_pred EEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhC---------CCCEEEEEeccCchhh--------------
Confidence 56777744100000000011222223445567777767642 3567899999887431
Q ss_pred CCCCCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 016429 271 GISSASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (390)
Q Consensus 271 ~~~~~~~~~~~~~~l~~-~~~v~~v~~GH~H~~ 302 (390)
..+.+ -.+|++|++||.|..
T Consensus 210 ------------~~la~~~~giDlIlgGHtH~~ 230 (579)
T 3ztv_A 210 ------------IEIAQKVNDIDVIVTGDSHYL 230 (579)
T ss_dssp ------------HHHHHHCSSCCEEEECSSCCE
T ss_pred ------------HHHHHhCCCCCEEEeCCCCcc
Confidence 12222 246999999999983
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.4e-06 Score=78.40 Aligned_cols=104 Identities=20% Similarity=0.159 Sum_probs=55.2
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHH--------
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSL-------- 113 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~-------- 113 (390)
+++|++++|+|-.-.+.. +.. ...........+..+.+.++++.++ ++|.+||++.+..........
T Consensus 11 ~l~Il~tnD~Hg~~~~~~-~~~---~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~ 86 (341)
T 3gve_A 11 HLSILATTDIHANMMDYD-YYS---DKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISG 86 (341)
T ss_dssp EEEEEEECCCTTCCSSEE-TTT---TEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeccCCCccCcc-ccC---CCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhccccccccc
Confidence 589999999996533211 100 0000112333445555555666676 667899966443211111111
Q ss_pred ---HHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 114 ---NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 114 ---~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
...+..|...+..+ +++||||+..+ .+.+.+++....
T Consensus 87 g~~~~~~~~ln~lg~Da-~tlGNHEfd~G--~~~L~~~~~~~~ 126 (341)
T 3gve_A 87 TKTHPIISVMNALKYDA-GTLGNHEFNYG--LDFLDGTIKGAD 126 (341)
T ss_dssp SSCCHHHHHHHHTTCCB-EECCGGGGTTC--HHHHHHHHHTCS
T ss_pred ccccHHHHHHHhhCCCe-eeccchhhccC--HHHHHHHHHhcC
Confidence 11233344466665 56899999765 456666666543
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-05 Score=74.47 Aligned_cols=103 Identities=20% Similarity=0.165 Sum_probs=55.1
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHH--------
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSL-------- 113 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~-------- 113 (390)
+++|++++|+|-.-.+.....+ ..........++.+.+.++++.++ ++|.+||++.+... ..+...
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~----~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKD----AATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTT----EECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCC----CccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccc
Confidence 5899999999965332110000 000112333445555556667776 77899996643321 111111
Q ss_pred HHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 114 ~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
...+..|...+..++ ++||||+..+ .+.+.+++....
T Consensus 83 ~p~~~~mn~lg~D~~-t~GNHEfd~G--~~~l~~~~~~a~ 119 (339)
T 3jyf_A 83 HPVYKAMNTLNYAVG-NLGNHEFNYG--LDFLHKALAGAK 119 (339)
T ss_dssp CHHHHHHTTSCCSEE-ECCGGGGTTC--HHHHHHHHHTCS
T ss_pred hHHHHHHHhcCCCEE-ecchhhhhcc--HHHHHHHHHhcC
Confidence 012333444666654 6799998654 456666666543
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.39 E-value=6.1e-06 Score=81.70 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=46.3
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH----hcCCC-EEEEcCCcCCCCChhhHH-HHHH
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS----AEKPD-LIVFTGDNIFGFDATDAA-KSLN 114 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~----~~~pD-~Vv~~GD~i~~~~~~~~~-~~~~ 114 (390)
..+++|++++|+|-....... ..... .+.--+..+...++ +++|| ++|.+||++.+..-.... ..-.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~-----~~~~~--~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~ 85 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHIN-----QPLYH--ANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGL 85 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSS-----CGGGC--CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTT
T ss_pred ceEEEEEEEcccccCccCccc-----ccccc--cccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCH
Confidence 467999999999975432110 00000 01111233333333 46788 579999966443211100 0011
Q ss_pred HHHhHhHhCCCCEEEEeCCCCCCCC
Q 016429 115 AAFAPAIASNIPWVAVLGNHDQEST 139 (390)
Q Consensus 115 ~~l~~~~~~~ip~~~v~GNHD~~~~ 139 (390)
..+.-|...+..+ +++||||+...
T Consensus 86 ~~~~~ln~lg~Da-~tlGNHEfD~G 109 (557)
T 3c9f_A 86 KSTPIFIKQDYDL-LTIGNHELYLW 109 (557)
T ss_dssp TTHHHHTTSCCSE-ECCCGGGSSSH
T ss_pred HHHHHHHhcCCCE-Eeecchhcccc
Confidence 1222233456664 57899999764
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.38 E-value=2.8e-05 Score=76.83 Aligned_cols=96 Identities=18% Similarity=0.108 Sum_probs=47.2
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
+++|+|++|+|-.-.+.............+......+..+.+.++++.|+ ++|.+||.+.+..- .....-...+.-|.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-~~~~~g~~~i~~mN 81 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-FTVYKGAEVAHFMN 81 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH-HHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH-HHHhCChHHHHHHh
Confidence 47899999999543221110000000001112333344455555566776 67778996655421 11111112222233
Q ss_pred hCCCCEEEEeCCCCCCCCC
Q 016429 122 ASNIPWVAVLGNHDQESTL 140 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~ 140 (390)
..+.. +.++||||+..+.
T Consensus 82 ~lgyD-a~~lGNHEFd~G~ 99 (530)
T 4h1s_A 82 ALRYD-AMALGNHEFDNGV 99 (530)
T ss_dssp HTTCC-EEECCGGGGTTTT
T ss_pred ccCCC-EEEEchhhhccCH
Confidence 34544 4689999997654
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.7e-06 Score=75.40 Aligned_cols=70 Identities=23% Similarity=0.166 Sum_probs=43.2
Q ss_pred cCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCChhhHHHHHHHHH
Q 016429 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAF 117 (390)
Q Consensus 39 ~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l 117 (390)
+....+||+++||+|-. ...+..+.+.+.. .++|.||++||++.... ...+ .+
T Consensus 8 ~~~~~~~i~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~--~~~~----~~ 61 (221)
T 1g5b_A 8 DGSKYRNIWVVGDLHGC--------------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA--ENVE----CL 61 (221)
T ss_dssp EGGGCSCEEEECCCTTC--------------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS--CHHH----HH
T ss_pred CCCCCceEEEEEcCCCC--------------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCC--ChHH----HH
Confidence 33556899999999921 1223333333333 36899999999554332 2222 23
Q ss_pred hHhHhCCCCEEEEeCCCCC
Q 016429 118 APAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~ 136 (390)
..+. ..++++|+||||.
T Consensus 62 ~~l~--~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 62 ELIT--FPWFRAVRGNHEQ 78 (221)
T ss_dssp GGGG--STTEEECCCHHHH
T ss_pred HHHh--cCCEEEEccCcHH
Confidence 3222 2589999999996
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.04 E-value=7.4e-05 Score=66.89 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=46.9
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHH-HHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTT-AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
.+|||++++|+|-..+ ...+ ..+.+..++.++|++++.||...+..... ....+. +
T Consensus 3 ~~m~ilf~GDv~G~~G------------------~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~--~~~~~~---l 59 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAG------------------RNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS--LKHYEF---L 59 (281)
T ss_dssp CCCEEEEECEEBHHHH------------------HHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC--HHHHHH---H
T ss_pred ceEEEEEECCcCChHH------------------HHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC--HHHHHH---H
Confidence 3599999999993311 1112 22333333347899999999666542211 122223 3
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHH
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVMKHIV 150 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~ 150 (390)
.+.++.++. .|||++.... ++.+++.
T Consensus 60 n~~G~Da~T-lGNHefD~g~---~~~~~l~ 85 (281)
T 1t71_A 60 KEAGVNYIT-MGNHTWFQKL---DLAVVIN 85 (281)
T ss_dssp HHHTCCEEE-CCTTTTCCGG---GHHHHTT
T ss_pred HhcCCCEEE-EccCcccCCc---cHHHHhh
Confidence 345777664 4999997762 3444443
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.98 E-value=5.7e-06 Score=74.03 Aligned_cols=66 Identities=24% Similarity=0.259 Sum_probs=41.0
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
..||+++||+|-. ...+..+.+.+....+ |.||++||++.... ...+.+. .+..
T Consensus 18 ~~~i~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~--~~~~~l~-~l~~-- 72 (262)
T 2qjc_A 18 TGRVIIVGDIHGC--------------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP--DSFGVVR-LLKR-- 72 (262)
T ss_dssp CSCEEEECCCTTC--------------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSS--CHHHHHH-HHHH--
T ss_pred CCeEEEEeCCCCC--------------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCC--CHHHHHH-HHHH--
Confidence 3499999999921 1233444444444455 99999999654332 2222332 2222
Q ss_pred hCCCCEEEEeCCCCC
Q 016429 122 ASNIPWVAVLGNHDQ 136 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~ 136 (390)
.++++|+||||.
T Consensus 73 ---~~~~~v~GNHd~ 84 (262)
T 2qjc_A 73 ---LGAYSVLGNHDA 84 (262)
T ss_dssp ---HTCEECCCHHHH
T ss_pred ---CCCEEEeCcChH
Confidence 379999999996
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.98 E-value=5.1e-06 Score=74.98 Aligned_cols=67 Identities=19% Similarity=0.165 Sum_probs=40.8
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~ 122 (390)
|||+++||+|.. ...+..+.+.+.. .++|.+|++||++.... ...+.+ ..+..
T Consensus 1 M~i~vigDiHG~--------------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~--~s~~~l-~~l~~--- 54 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------------YDELIALLHKVEFTPGKDTLWLTGDLVARGP--GSLDVL-RYVKS--- 54 (280)
T ss_dssp -CEEEECCCCSC--------------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSS--CHHHHH-HHHHH---
T ss_pred CeEEEEecCCCC--------------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCC--ccHHHH-HHHHh---
Confidence 689999999932 1223333343333 46799999999665432 223233 23332
Q ss_pred CCCCEEEEeCCCCC
Q 016429 123 SNIPWVAVLGNHDQ 136 (390)
Q Consensus 123 ~~ip~~~v~GNHD~ 136 (390)
.+.++++|.||||.
T Consensus 55 l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 55 LGDSVRLVLGNHDL 68 (280)
T ss_dssp TGGGEEECCCHHHH
T ss_pred CCCceEEEECCCcH
Confidence 33489999999996
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00092 Score=58.91 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=47.3
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++.|+= |.. ....++.+...++++. |++++.|+...+..... . ...+. +.+.
T Consensus 1 m~ilf~GDv~-g~~-----------------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~-~-~~~~~---l~~~ 56 (255)
T 1t70_A 1 MRVLFIGDVF-GQP-----------------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH-R-DAARG---ALEA 56 (255)
T ss_dssp CEEEEECCBB-HHH-----------------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC-H-HHHHH---HHHH
T ss_pred CEEEEEeccC-ChH-----------------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC-H-HHHHH---HHhC
Confidence 6899999995 211 1123333444444555 99999998665542111 1 12222 3346
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
++.++.+ |||++... ++.+++.+.+
T Consensus 57 G~Da~Tl-GNHefD~~----~l~~~l~~~~ 81 (255)
T 1t70_A 57 GAGCLTL-GNHAWHHK----DIYPMLSEDT 81 (255)
T ss_dssp TCSEEEC-CTTTTSST----THHHHHHTTC
T ss_pred CCCEEEe-ccccccCc----hHHHHHhhCC
Confidence 7777655 99999754 4566666544
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0016 Score=57.15 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=48.0
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++.|+=-..+ ...+..+...++++. |++++.|...++...-. . . ....+.+.
T Consensus 1 m~ilfiGDi~g~~G------------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~-~-~---~~~~l~~~ 56 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD-R-R---SYRLLREA 56 (252)
T ss_dssp CEEEEECCBCHHHH------------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC-H-H---HHHHHHHH
T ss_pred CEEEEEEecCCccc------------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC-H-H---HHHHHHhC
Confidence 68999999842221 123344444455556 99999887555442211 1 2 22223346
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (390)
++.++ +.|||++... ++.+++.+.+
T Consensus 57 G~D~~-T~GNHefD~~----~l~~~l~~~~ 81 (252)
T 2z06_A 57 GVDLV-SLGNHAWDHK----EVYALLESEP 81 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHHSS
T ss_pred CCCEE-EeccEeeECc----hHHHHhccCC
Confidence 88886 6799999774 4666666554
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00018 Score=68.79 Aligned_cols=83 Identities=16% Similarity=0.279 Sum_probs=55.9
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-----------hcCCCEEEEcCCcCCCCCh---
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-----------AEKPDLIVFTGDNIFGFDA--- 106 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-----------~~~pD~Vv~~GD~i~~~~~--- 106 (390)
+...+|+++||+|++..... ....++.|.+.|. ..+...||++||.|.+.+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~--------------~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e 263 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGE--------------SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRD 263 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHH--------------HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC------
T ss_pred CCCCEEEEECCcccCCCccc--------------chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccch
Confidence 46689999999999975310 1234455666654 2468899999997766432
Q ss_pred ----------------hhHHHHHHHHHhHhHhCCCCEEEEeCCCCCCC
Q 016429 107 ----------------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (390)
Q Consensus 107 ----------------~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~~ 138 (390)
.+.++.++.++..+ ...+|+.++|||||...
T Consensus 264 ~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l-~~~i~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 264 SINKAKYLTKKTQAASVEAVKMLDEILLQL-SASVPVDVMPGEFDPTN 310 (476)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHH-HTTSCEEEECCTTSSSC
T ss_pred hhhhhhccccccchhhHHHHHHHHHHHHhc-ccCceEEecCCCCCccc
Confidence 12345556666654 36899999999999854
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00014 Score=67.65 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=27.7
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCC
Q 016429 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (390)
Q Consensus 278 ~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (390)
+...++.+++..+.+.|++||+|........+|-.+..-.+..|+
T Consensus 266 g~~~~~~fl~~~~~~~IV~GHt~~~~~~~~~~~~~i~Idsg~~~g 310 (342)
T 2z72_A 266 TEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVG 310 (342)
T ss_dssp CHHHHHHHHHHHTCSEEEECSSCCSSCEEETTTTEEECCCCGGGS
T ss_pred ChHHHHHHHHHCCCcEEEECCCcccchhhhcCCCEEEEECCCCCC
Confidence 345567777776799999999998543333344434433444443
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00038 Score=63.33 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=47.8
Q ss_pred cCCcceeccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh---c-CCCEEEEcCCcCCCCCh
Q 016429 31 KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA---E-KPDLIVFTGDNIFGFDA 106 (390)
Q Consensus 31 ~~~~~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~-~pD~Vv~~GD~i~~~~~ 106 (390)
+++.-++++....+||++++|+|-. . ..+.++++. . ..+.+|++||+|....
T Consensus 47 ~ep~l~~l~~p~~~ri~viGDIHG~--------------------~---~~L~~ll~~~g~~~~~~~~vflGD~VDRG~- 102 (315)
T 3h63_A 47 KLSTLVETTLKETEKITVCGDTHGQ--------------------F---YDLLNIFELNGLPSETNPYIFNGDFVDRGS- 102 (315)
T ss_dssp TSCSEEEECCCTTCEEEEECCCTTC--------------------H---HHHHHHHHHHCCCBTTBCEEEESCCSSSST-
T ss_pred hCCCeEEEecCCCceEEEEecCCCC--------------------H---HHHHHHHHHhCCCCCCCEEEEeCCccCCCc-
Confidence 3444555665667999999999932 1 223334433 2 2346999999665443
Q ss_pred hhHHHHHHHHHhHhHhCCCCEEEEeCCCCCC
Q 016429 107 TDAAKSLNAAFAPAIASNIPWVAVLGNHDQE 137 (390)
Q Consensus 107 ~~~~~~~~~~l~~~~~~~ip~~~v~GNHD~~ 137 (390)
...+.+.-.+.-....+-.++++.||||..
T Consensus 103 -~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 103 -FSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp -THHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred -ChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 233333322221122345799999999963
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00021 Score=65.09 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=42.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHh-Hh
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA-IA 122 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~-~~ 122 (390)
.+|++++|+|-. ...+..+.+.+....++.+|++||+|..+. ...+.+. .+..+ ..
T Consensus 50 ~~i~viGDIHG~--------------------~~~L~~ll~~~~~~~~~~~vflGD~VDRG~--~s~evl~-lL~~lk~~ 106 (309)
T 2ie4_C 50 CPVTVCGDVHGQ--------------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGY--YSVETVT-LLVALKVR 106 (309)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTSCEEECSCCSSSST--THHHHHH-HHHHHHHH
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHcCCCCCCEEEEeCCccCCCC--ChHHHHH-HHHHHHhh
Confidence 679999999921 122233333333345688999999665433 2333332 22222 12
Q ss_pred CCCCEEEEeCCCCCCC
Q 016429 123 SNIPWVAVLGNHDQES 138 (390)
Q Consensus 123 ~~ip~~~v~GNHD~~~ 138 (390)
.+-.++++.||||...
T Consensus 107 ~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 107 YRERITILRGNHESRQ 122 (309)
T ss_dssp CTTTEEECCCTTSSTT
T ss_pred CCCcEEEEeCCCCHHH
Confidence 3456999999999853
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00041 Score=63.59 Aligned_cols=59 Identities=10% Similarity=0.119 Sum_probs=34.9
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCccc-ccCCeEEEecCCCCCC-CCCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCG-RLTGIQLCYGGGFGYH-AYGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-~~~gi~~~~~~~~g~~-~~~~~~~~~g~rv~ei~~ 340 (390)
.+....+++++..++++|+=||.=..+-.. ..+|--+..=+++.|. .++ ..+-+++|+.
T Consensus 235 FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~-----N~~a~~~i~~ 295 (335)
T 3icf_A 235 FGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQG-----NLGGVIHVVP 295 (335)
T ss_dssp ECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSC-----CEEEEEEECT
T ss_pred eCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCC-----CceEEEEEec
Confidence 456778999999999999999997633222 1222111111233342 233 3566788875
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00032 Score=64.39 Aligned_cols=72 Identities=14% Similarity=0.072 Sum_probs=42.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
.+|.+++|+|-. ...+..+.+.+.....|-+|++||+|..+. ...+.+.-.+.--...
T Consensus 57 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vflGD~VDRG~--~s~evl~lL~~lk~~~ 114 (330)
T 1fjm_A 57 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGK--QSLETICLLLAYKIKY 114 (330)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSS--CHHHHHHHHHHHHHHS
T ss_pred CceEEecCCCCC--------------------HHHHHHHHHHhCCCCcceEEeCCCcCCCCC--ChHHHHHHHHHhhhhc
Confidence 579999999922 122233333333345688999999665443 2333333222211123
Q ss_pred CCCEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQE 137 (390)
Q Consensus 124 ~ip~~~v~GNHD~~ 137 (390)
+-.++++.||||..
T Consensus 115 p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 115 PENFFLLRGNHECA 128 (330)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCceEEecCCchHh
Confidence 45799999999973
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00065 Score=66.10 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=45.4
Q ss_pred ceeccCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh---cC-CCEEEEcCCcCCCCChhhHH
Q 016429 35 KLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA---EK-PDLIVFTGDNIFGFDATDAA 110 (390)
Q Consensus 35 ~~~~~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-pD~Vv~~GD~i~~~~~~~~~ 110 (390)
-+..+....+||++++|+|-. . ..+.++++. .. .|.+|++||+|..+. ...
T Consensus 204 ~~~~~~~~~~~~~vigDiHG~--------------------~---~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~--~s~ 258 (477)
T 1wao_1 204 LVETTLKETEKITVCGDTHGQ--------------------F---YDLLNIFELNGLPSETNPYIFNGDFVDRGS--FSV 258 (477)
T ss_dssp EEEECCCSSCEEEEECBCTTC--------------------H---HHHHHHHHHHCCCBTTBCEEEESCCSSSST--THH
T ss_pred eEEeecCCCcceEEEeCCCCC--------------------H---HHHHHHHHHcCCCCCcCeEEEeccccCCCc--chH
Confidence 334444456999999999922 1 223334433 22 357999999655432 233
Q ss_pred HHHHHHHhHhHhCCCCEEEEeCCCCC
Q 016429 111 KSLNAAFAPAIASNIPWVAVLGNHDQ 136 (390)
Q Consensus 111 ~~~~~~l~~~~~~~ip~~~v~GNHD~ 136 (390)
+.+...+.-....+.+++++.||||.
T Consensus 259 e~~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 259 EVILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred HHHHHHHHHHhhCCCceEeecCCccH
Confidence 34433322112346689999999996
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00083 Score=60.62 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=41.6
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
.+|++++|+|-. ...+..+.+.+.....+.+|+.||+|..... ..+.+.-.+.-....
T Consensus 56 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~--s~evl~lL~~lk~~~ 113 (299)
T 3e7a_A 56 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKY 113 (299)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCC--cHHHHHHHHHHHhhC
Confidence 368999999932 2222333333333456889999996654432 333333222211234
Q ss_pred CCCEEEEeCCCCC
Q 016429 124 NIPWVAVLGNHDQ 136 (390)
Q Consensus 124 ~ip~~~v~GNHD~ 136 (390)
+-.++++.||||.
T Consensus 114 p~~v~~lrGNHE~ 126 (299)
T 3e7a_A 114 PENFFLLRGNHEC 126 (299)
T ss_dssp TTTEEECCCTTSS
T ss_pred CCcEEEEecCchh
Confidence 5569999999997
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.001 Score=61.31 Aligned_cols=72 Identities=14% Similarity=0.044 Sum_probs=42.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
.+|++++|+|-. ...+..+.+.......|.+|++||+|..+. ...+.+.-.+.-....
T Consensus 70 ~pi~ViGDIHG~--------------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~--~s~Evl~lL~~lk~~~ 127 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGY--FSIECVLYLWALKILY 127 (357)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTCCEEECSCCSSSST--THHHHHHHHHHHHHHC
T ss_pred ccceeeccCCCC--------------------HHHHHHHHHhcCCCCCcEEEECCCccCCCc--ChHHHHHHHHHhhhhc
Confidence 468999999932 122233333333356689999999665443 2333333222211223
Q ss_pred CCCEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQE 137 (390)
Q Consensus 124 ~ip~~~v~GNHD~~ 137 (390)
+-.++++.||||..
T Consensus 128 p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 128 PKTLFLLRGNHECR 141 (357)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCcEEEEeCchhhh
Confidence 45699999999973
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0024 Score=61.55 Aligned_cols=27 Identities=4% Similarity=0.162 Sum_probs=22.7
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVND 303 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~ 303 (390)
.+...+..+++..++++++-||.-..+
T Consensus 260 FG~d~v~~FL~~n~l~lIIRaHq~v~~ 286 (521)
T 1aui_A 260 YSYPAVCEFLQHNNLLSILRAHEAQDA 286 (521)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred cCHHHHHHHHHHcCCcEEEEccchhcc
Confidence 355778999999999999999998854
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.027 Score=53.65 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=54.7
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCcCCCCCh-------------
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDA------------- 106 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~Vv~~GD~i~~~~~------------- 106 (390)
+..++|++.|..+.....- +...+..|.+.++.+ +||.+|++|.+|+....
T Consensus 145 ~~~l~ivvAsGPyT~sdnl---------------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~ 209 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF---------------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 209 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC---------------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTC
T ss_pred CCCcEEEEEeCCccCCCcc---------------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccc
Confidence 4789999999998765431 233455566666564 89999999997765521
Q ss_pred ---h-hHHHHHHHHHhHhHh---CCCCEEEEeCCCCCC
Q 016429 107 ---T-DAAKSLNAAFAPAIA---SNIPWVAVLGNHDQE 137 (390)
Q Consensus 107 ---~-~~~~~~~~~l~~~~~---~~ip~~~v~GNHD~~ 137 (390)
. ...+.+.+.+.++++ ..+.+++|||+||..
T Consensus 210 ~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 210 KTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp SSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 1 123344444444332 457799999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 390 | ||||
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 5e-14 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 3e-08 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 6e-07 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-05 | |
| d1ii7a_ | 333 | d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus | 8e-05 | |
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 0.002 |
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 70.2 bits (170), Expect = 5e-14
Identities = 42/295 (14%), Positives = 78/295 (26%), Gaps = 49/295 (16%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
F +AD+ +A+ + + S + E+ +V GD I G
Sbjct: 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVL-QWRRERVQCVVQLGDIIDG 62
Query: 104 FDATDAA--KSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
+ A ++L+ A A ++ V GNH+ + + + + + T +
Sbjct: 63 HNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS 122
Query: 162 S----------------------DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSG 199
DA+ + G + NL L+
Sbjct: 123 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLP 182
Query: 200 DYSTVPS---VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEF 256
S V G Q W + + L++ H+P+
Sbjct: 183 PVSVGLEQRFVKFNGGFSEQQLQWLDAVLTL----------SDHKQERVLIFSHLPVHPC 232
Query: 257 AYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGI 311
A + + + V GHDH C +G
Sbjct: 233 AADPICLAWNHEA-----------VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGA 276
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 52.1 bits (123), Expect = 3e-08
Identities = 44/280 (15%), Positives = 75/280 (26%), Gaps = 62/280 (22%)
Query: 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNI 101
++ +L ++D H G V +N+ +PD IVFTGD
Sbjct: 3 PDYVLLHISDTHLIGGDRRLYGAVDADD----RLGELLEQLNQS--GLRPDAIVFTGDLA 56
Query: 102 FGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNP 161
+ K A V V+GNHD + L + + +
Sbjct: 57 DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSM---------- 106
Query: 162 SDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWF 221
+ I ++ L G + +G I+ SQ W
Sbjct: 107 -------APLDRVCMID--------GLRIIVLDTSVPGHH--------HGEIRASQLGWL 143
Query: 222 EQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281
+ G + P + D + +R +
Sbjct: 144 AE-------------ELATPAPDGTILALHHPPIPSVLDMAVTVELR---------DQAA 181
Query: 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
++ DV+A+ GH H GI + Y
Sbjct: 182 LGRVLRGTDVRAILAGHLH-YSTNATFVGIPVSVASATCY 220
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 48.2 bits (113), Expect = 6e-07
Identities = 47/355 (13%), Positives = 88/355 (24%), Gaps = 72/355 (20%)
Query: 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFG 103
+ + V D + ++ I + D I+ GDN +
Sbjct: 5 LRFVAVGDWGGVP----------NAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYF 54
Query: 104 FDATDA-----AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ 158
DA ++ F+ N+PW + GNHD +S +
Sbjct: 55 TGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQ-------------IA 101
Query: 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN---LYFLDSGDYSTVPSVPGYGWIKP 215
+ Y L + + +L+ L S P P +
Sbjct: 102 YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR 161
Query: 216 SQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275
+Q W ++ AA K + + +
Sbjct: 162 TQLAWIKKQ-----------LAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLP----- 205
Query: 276 SVNSGFFTTMVAAGDVKAVFTGHDHVNDFC--GRLTGIQLCYGGGFGYHAYGKAGWERRA 333
++ V A GHDH + G L G F +
Sbjct: 206 ---------LLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNG 256
Query: 334 RVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLT----GVDGHVLWSKTSSGMRRR 384
+ + G+ V+ + + ++ G L+ + RR
Sbjct: 257 YLRFHFGAENSLGGFAYVE-------ITPKEMSVTYIEASGKSLFKTK---LPRR 301
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 43.9 bits (102), Expect = 2e-05
Identities = 42/279 (15%), Positives = 72/279 (25%), Gaps = 65/279 (23%)
Query: 45 KILQVADMHFA--NGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF 102
+ ++D HF K +DV + S LN E+PD +V +GD +
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNA--------LRERPDAVVVSGDIVN 53
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ A + N P + GNHD ++ ++ L L +
Sbjct: 54 CGRPEEY----QVARQILGSLNYPLYLIPGNHDDKALFLE-----YLQPLCPQLGSDANN 104
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFE 222
+D F L F+DS T GW+ W E
Sbjct: 105 MRCAVDDFA-------------------TRLLFIDSSRAGT-----SKGWLTDETISWLE 140
Query: 223 QTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282
+ ++ H P
Sbjct: 141 AQLFEGGDKPAT------------IFMHHPPLPLGNAQMDPIACENGHR---------LL 179
Query: 283 TTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGY 321
+ + +F GH+H + + G +
Sbjct: 180 ALVERFPSLTRIFCGHNHSLTM-TQYRQALISTLPGTVH 217
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 41.6 bits (96), Expect = 8e-05
Identities = 41/313 (13%), Positives = 76/313 (24%), Gaps = 54/313 (17%)
Query: 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIF-- 102
K +AD+H G + + E D I+ GD +F
Sbjct: 2 KFAHLADIHL--GYEQFHKPQREEEF-----AEAFKNALEIAVQENVDFILIAGD-LFHS 53
Query: 103 GFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS 162
+ K A +IP A+ GNHD T +
Sbjct: 54 SRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHD--------------RTQRGPSVLNLLE 99
Query: 163 DAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFE 222
D ++ G ++ L L +G+Y
Sbjct: 100 DFGLVYVIGMRKEKVENE---------YLTSERLGNGEYLVKGVYKD-----LEIHGMKY 145
Query: 223 QTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFF 282
+SA + + ++ H + E + ++ + +
Sbjct: 146 MSSAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEG------- 198
Query: 283 TTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLEK 342
GH H + +G + Y G +G +
Sbjct: 199 --------YLYYALGHIH-KRYETSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERY 249
Query: 343 TEKRGWGDVKSIK 355
+G+ V+ K
Sbjct: 250 GVNKGFYIVEDFK 262
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 37.6 bits (86), Expect = 0.002
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 72 GCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI---ASNIPWV 128
G S + T + +S +K ++F GD + + + + PW+
Sbjct: 17 GQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWI 76
Query: 129 AVLGNHDQE 137
GNH+ E
Sbjct: 77 WTAGNHEIE 85
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.96 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.96 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.94 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.92 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.89 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.83 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.83 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.73 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.52 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.48 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.42 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.39 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.23 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.2 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.85 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.8 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.49 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.46 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.42 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 94.63 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 93.6 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 93.47 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 93.24 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.08 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 92.47 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 90.98 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=1.3e-28 Score=220.59 Aligned_cols=235 Identities=21% Similarity=0.259 Sum_probs=147.8
Q ss_pred CCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHHh
Q 016429 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (390)
Q Consensus 41 ~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~ 118 (390)
...|||+||||+|+........... ...+.++.+.+.+++ .+||+||++|| +++.+.++.++.+.+.+.
T Consensus 2 ~~~~~i~~iSD~Hl~~~~~~~~~~~--------~~~~~l~~~i~~i~~~~~~pD~vl~~GD-l~~~g~~~~~~~~~~~l~ 72 (256)
T d2hy1a1 2 RPDYVLLHISDTHLIGGDRRLYGAV--------DADDRLGELLEQLNQSGLRPDAIVFTGD-LADKGEPAAYRKLRGLVE 72 (256)
T ss_dssp CCSEEEEEECCCCBC------------------CHHHHHHHHHHHHHHHTCCCSEEEECSC-CBSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeCccCCCCcccccCc--------CHHHHHHHHHHHHHhcCCCCCEEEECCC-CCCCCChhHHHHHHHHhh
Confidence 3589999999999976543211100 012223333344433 48999999999 566666677777777776
Q ss_pred HhH-hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEe
Q 016429 119 PAI-ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (390)
Q Consensus 119 ~~~-~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ld 197 (390)
++. +.++|+++++||||. ...+.+.+ ... ....+..+|++.+.+ ++++++|
T Consensus 73 ~~~~~~~~p~~~v~GNHD~-----~~~~~~~~---~~~---------~~~~~~~~~~~~~~~-----------~~~~~ld 124 (256)
T d2hy1a1 73 PFAAQLGAELVWVMGNHDD-----RAELRKFL---LDE---------APSMAPLDRVCMIDG-----------LRIIVLD 124 (256)
T ss_dssp HHHHHHTCEEEECCCTTSC-----HHHHHHHT---TCC---------CCCCSCCCEEEEETT-----------EEEEECC
T ss_pred hhhhhcCCCEEEEcccccc-----hhhhhhhh---ccc---------cccccccceEEEecc-----------cceeeee
Confidence 654 368999999999995 22222221 110 011122346666665 8899999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCC
Q 016429 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (390)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~ 277 (390)
|..+.. ..|.+.++|++||++.|++ .+.+++|+++|||+......+ .. .....
T Consensus 125 t~~~~~-----~~g~~~~~~~~wl~~~L~~------------~~~~~~iv~~Hhpp~~~~~~~------~~----~~~~~ 177 (256)
T d2hy1a1 125 TSVPGH-----HHGEIRASQLGWLAEELAT------------PAPDGTILALHHPPIPSVLDM------AV----TVELR 177 (256)
T ss_dssp CBCTTC-----SSBCCCHHHHHHHHHHHTS------------CCTTCEEEECSSCSSCCSSHH------HH----TTSBC
T ss_pred eeecCC-----cCCcccHHHHHHHHHHHHh------------hhccCceeeeecCCccccccc------cc----ccccc
Confidence 954322 3567899999999998753 256789999999875421111 00 11224
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCC-----CC---CCCCceeEEEEEec
Q 016429 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-----GK---AGWERRARVVVASL 340 (390)
Q Consensus 278 ~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~-----~~---~~~~~g~rv~ei~~ 340 (390)
+...+..+++.++|++++|||+|. .....++|++++.+++++++.. +. ..-.+|+++++++.
T Consensus 178 ~~~~~~~i~~~~~v~~~~~GH~H~-~~~~~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~ 247 (256)
T d2hy1a1 178 DQAALGRVLRGTDVRAILAGHLHY-STNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYP 247 (256)
T ss_dssp CHHHHHHHHTTSSEEEEEECSSSS-CEEEEETTEEEEECCCCC-------------------CEEEEEECS
T ss_pred cHHHHHHHHhccCceEEEccccch-hhceEECCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEEC
Confidence 677888999999999999999998 6777789999998888765321 11 11246899998874
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.96 E-value=3.4e-27 Score=212.94 Aligned_cols=232 Identities=18% Similarity=0.225 Sum_probs=144.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
|||+||||+|++......... ......++.+.+.++. ++||+||++|| +++.+..+.++.+.+.+++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~--------~~~~~~l~~~~~~i~~~~~~~D~vv~~GD-l~~~~~~~~y~~~~~~l~~-- 69 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGF--------IDVNAANADVVSQLNALRERPDAVVVSGD-IVNCGRPEEYQVARQILGS-- 69 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTT--------BCHHHHHHHHHHHHHTCSSCCSEEEEESC-CBSSCCHHHHHHHHHHHTT--
T ss_pred CEEEEEecCcCCCCccccccC--------cCHHHHHHHHHHHHHhcCCCCCEEEECcc-cCcCCcchhHHHHHHHHhc--
Confidence 799999999998654321110 0011223333344433 58999999999 5666666666666666654
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCC
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~ 201 (390)
.++|+++++||||. +..+.+.+..... .... ......|.+...+ +++++|||...
T Consensus 70 -l~~p~~~i~GNHD~-----~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~-----------~~~i~ldt~~~ 124 (271)
T d3d03a1 70 -LNYPLYLIPGNHDD-----KALFLEYLQPLCP---QLGS-----DANNMRCAVDDFA-----------TRLLFIDSSRA 124 (271)
T ss_dssp -CSSCEEEECCTTSC-----HHHHHHHHGGGSG---GGCS-----CGGGCCEEECSSS-----------SEEEECCCCCT
T ss_pred -cCCCEEEEecCccc-----hHHHHHHhhhhhh---cccc-----ccCcceEEEecCC-----------eEEEecccccC
Confidence 68999999999997 2333333332111 1100 1111234443333 68999999533
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHH
Q 016429 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (390)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~ 281 (390)
.. ..+++.++|++||+++|++. +.+++|+++|||+......+ .+. ....|.+.
T Consensus 125 ~~-----~~~~l~~~ql~wL~~~L~~~------------~~~~~iv~~Hh~p~~~~~~~------~d~----~~~~~~~~ 177 (271)
T d3d03a1 125 GT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQ------MDP----IACENGHR 177 (271)
T ss_dssp TC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTT------TGG----GSBTTTHH
T ss_pred CC-----CcceecHHHHHHHHHHHhhh------------ccceeEEEeccCccccCccc------ccc----ccccchHH
Confidence 22 35679999999999988753 56789999999875422211 000 11235545
Q ss_pred HHHHHHc-CCeeEEEeccCCCCCcccccCCeEEEecCCCCCCC-CCC----CC---CCceeEEEEEe
Q 016429 282 FTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA-YGK----AG---WERRARVVVAS 339 (390)
Q Consensus 282 ~~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~-~~~----~~---~~~g~rv~ei~ 339 (390)
+..++++ .+|+++||||+|. .....++|++++.+++++++- .+. .. -+++++++.+.
T Consensus 178 l~~~l~~~~~v~~vl~GH~H~-~~~~~~~g~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 243 (271)
T d3d03a1 178 LLALVERFPSLTRIFCGHNHS-LTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQV 243 (271)
T ss_dssp HHHHHHHCTTEEEEEECSSSS-CEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEE
T ss_pred HHHHHHhcCCeEEEEeCCcch-hhceEECCEEEEEcCCceeecccCCCCCCcccccCCCEEEEEEEe
Confidence 5555555 4899999999998 577789999998888887542 111 01 24578877665
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.94 E-value=6.2e-26 Score=207.53 Aligned_cols=266 Identities=17% Similarity=0.155 Sum_probs=150.5
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHH---HHHHhcCCCEEEEcCCcCCCCCh--hhHHHHHHHHH
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFIN---RMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAF 117 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~i~~~~pD~Vv~~GD~i~~~~~--~~~~~~~~~~l 117 (390)
-|||++|||+|++...... ....... .....++..+. +.++.++|||||++||++.+... ....+.+..++
T Consensus 3 ~f~f~~isD~h~~~~~~~~-~~~~~~~---~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGE-NYLRTRR---RYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVM 78 (320)
T ss_dssp SEEEEEECCCCBCSSCCEE-CTTSSSE---ECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCcc-ccccccc---hhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHH
Confidence 4999999999998543211 1100000 01122334444 44567899999999996654321 12334555566
Q ss_pred hHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCcc---ccCccceeEEeccCCCCCCCCcceEEEE
Q 016429 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHI---IDGFGNYNLEIGGVKGSGFENKSVLNLY 194 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~g~~~y~~~~~~~~~~~~~~~~~~~l~ 194 (390)
+.+.+.++|++.++||||.............. ............. ......+.....+ ++++
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 143 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRL----NSAQRTGTDTGSDLIGDDIYAYEFSPAPN-----------FRFV 143 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHHCCHHHHHTSTT----CCCC------CEECGGGTCCCEEEEEETT-----------EEEE
T ss_pred HHHHHcCCCEEEecccCccccccchhcccccc----cchhhhcccccccccCCCCccceeecCCC-----------eEEE
Confidence 66666899999999999975432211110000 0000000000000 0111112222222 6677
Q ss_pred EEeCCCCCCCC-------------------------------------CCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCc
Q 016429 195 FLDSGDYSTVP-------------------------------------SVPGYGWIKPSQQFWFEQTSARLQRAYMSKPA 237 (390)
Q Consensus 195 ~lds~~~~~~~-------------------------------------~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~ 237 (390)
.+|+....... .....+.+.++|++||+++|++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~------- 216 (320)
T d2nxfa1 144 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH------- 216 (320)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-------
T ss_pred EecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-------
Confidence 77764321110 0112345889999999999998764
Q ss_pred ccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCCcccccCCeEEEec
Q 016429 238 AQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCGRLTGIQLCYG 316 (390)
Q Consensus 238 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~~~~~~~gi~~~~~ 316 (390)
...++|+++|||+....... .+...+.+.+..++.. ++|+++|+||+|.+.++...+|+..+..
T Consensus 217 ---~~~~viv~~H~p~~~~~~~~------------~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~~g~~~i~~ 281 (320)
T d2nxfa1 217 ---KQERVLIFSHLPVHPCAADP------------ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITL 281 (320)
T ss_dssp ---HTCEEEEEESSCCCTTSSCG------------GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEEC
T ss_pred ---cCCceEEEECCCCccCCCCC------------ccchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeeccCCCEEEEC
Confidence 46789999999986422111 1112355545555555 4799999999999877878899987766
Q ss_pred CCCCCCCCCCCCCCceeEEEEEecccccccCCCCcCceEEEEEccC
Q 016429 317 GGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLDD 362 (390)
Q Consensus 317 ~~~g~~~~~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~ 362 (390)
++..-... -..+|++++|..+. ..++..-|.++
T Consensus 282 ~~~~~~~~----~~~~~~~~~v~~d~---------~~~~~~~~~~~ 314 (320)
T d2nxfa1 282 EGVIETPP----HSHAFATAYLYEDR---------MVMKGRGRVED 314 (320)
T ss_dssp CCGGGCCT----TSCEEEEEEECSSE---------EEEEEEETSCC
T ss_pred CeeecCCC----CCCCEEEEEEECCE---------EEEEEeccccc
Confidence 55432221 24689999998543 34555555554
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.92 E-value=2.7e-24 Score=197.11 Aligned_cols=262 Identities=15% Similarity=0.163 Sum_probs=155.3
Q ss_pred cCCCCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHH-HHhcCCCEEEEcCCcCCCCCh----hhHHHHH
Q 016429 39 RQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRM-ISAEKPDLIVFTGDNIFGFDA----TDAAKSL 113 (390)
Q Consensus 39 ~~~~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-i~~~~pD~Vv~~GD~i~~~~~----~~~~~~~ 113 (390)
.++.+|||++++|++... ...+.+..+ +...+|||||++||+++.++. ...+..+
T Consensus 3 g~~~p~~F~v~GD~g~~~--------------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~ 62 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF--------------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTW 62 (312)
T ss_dssp CSSCCEEEEEECSCCSBH--------------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCC--------------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHH
Confidence 347789999999987432 122333333 445789999999997765432 2244556
Q ss_pred HHHHhHhHhCCCCEEEEeCCCCCCCCCCH---HHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcce
Q 016429 114 NAAFAPAIASNIPWVAVLGNHDQESTLSR---EGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSV 190 (390)
Q Consensus 114 ~~~l~~~~~~~ip~~~v~GNHD~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~ 190 (390)
.+.++++. ..+|+++++||||....... +.+..+...+. .|.......+..+|++.+.+
T Consensus 63 ~~~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~------~P~~~~~~~~~~~Ysf~~g~----------- 124 (312)
T d2qfra2 63 GRFTERSV-AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH------VPYEASQSTSPFWYSIKRAS----------- 124 (312)
T ss_dssp HHHHHHHH-TTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCC------CCGGGGTCSSTTSEEEEETT-----------
T ss_pred HHHHHHHh-hcceEEEecccccccccccccccccccchhhhcc------CCccccCCCCCceEEEEECC-----------
Confidence 66666654 57999999999997542110 11112222221 12111111223468898877
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCC
Q 016429 191 LNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (390)
Q Consensus 191 ~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e 270 (390)
+++++||+... .....+|++||+++|++..+ ....++|++.|+|++...... ..+
T Consensus 125 v~fi~Lds~~~---------~~~~~~Q~~WL~~~L~~~~~---------~~~~w~iv~~H~P~y~~~~~~-------~~~ 179 (312)
T d2qfra2 125 AHIIVLSSYSA---------YGRGTPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHH-------FME 179 (312)
T ss_dssp EEEEECCTTSC---------CSTTSHHHHHHHHHHHTCCT---------TTCCEEEEECSSCSSCCBSTT-------TTT
T ss_pred EEEEEeecccc---------ccchHHHHHHHHHHHHHHhh---------cCCCEEEEEccccccccCCCC-------ccc
Confidence 89999999521 11355799999999875432 244569999999997521110 000
Q ss_pred CCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccc------------------cCCeEEEecCCCCCC-----CC--C
Q 016429 271 GISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR------------------LTGIQLCYGGGFGYH-----AY--G 325 (390)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~------------------~~gi~~~~~~~~g~~-----~~--~ 325 (390)
.......|..|+.+++|+++|+||+|..+.... -.|...+..|+.|.. .+ .
T Consensus 180 ----~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~ 255 (312)
T d2qfra2 180 ----GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQP 255 (312)
T ss_dssp ----THHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSS
T ss_pred ----chhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcCCCcccccccccCC
Confidence 011235678888888999999999998654321 123333333444411 11 1
Q ss_pred CCCC------CceeEEEEEecccccccCCCCcCceEEEEEccCCCCCcccceeEeec
Q 016429 326 KAGW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSK 376 (390)
Q Consensus 326 ~~~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~l~~~ 376 (390)
.+.| ..|+-+++|.. . ..-..+|+|..++.....|+.+|.+.
T Consensus 256 ~~~~s~~~~~~~G~~~l~v~n---~------t~l~~~~~~~~d~~~~~~D~~~i~~~ 303 (312)
T d2qfra2 256 QPEYSAFREASFGHGMFDIKN---R------THAHFSWNRNQDGVAVEADSVWFFNR 303 (312)
T ss_dssp CCTTEEEEECCCEEEEEEECS---S------SEEEEEEEESSSCTTCCSEEEEEECT
T ss_pred CCCeeEEEecCCCEEEEEEEc---C------CeEEEEEEECCCCCEEeeeEEEEEeC
Confidence 1222 23777777742 1 13456788888887433488888875
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=3e-23 Score=189.14 Aligned_cols=226 Identities=18% Similarity=0.239 Sum_probs=132.7
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh-HHHHHHHH----
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAA---- 116 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~-~~~~~~~~---- 116 (390)
..+||++++|+|.+........ ......+.+.+.+++++|||||++||+++..+... ....+.+.
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~ 72 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTA----------REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV 72 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCH----------HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT
T ss_pred CCeEEEEEecCCCCCCcccccH----------HHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHH
Confidence 4789999999997654422100 01223356677777899999999999886654321 11122222
Q ss_pred HhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEE
Q 016429 117 FAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 117 l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~l 196 (390)
.......++|+++++||||...+..... ...... + ....+..+|.+...... ....+.++++
T Consensus 73 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~---~~~~~~-------~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~l 134 (302)
T d1utea_ 73 FSDPSLRNVPWHVLAGNHDHLGNVSAQI---AYSKIS-------K---RWNFPSPYYRLRFKIPR-----SNVSVAIFML 134 (302)
T ss_dssp SCSGGGTTCCEEECCCHHHHHSCHHHHH---HGGGTS-------T---TEECCSSSEEEEEECTT-----SSCEEEEEEC
T ss_pred hhhhhhcCCceEEeeccccccccccccc---chhhcc-------c---cccCCCcccceeecccC-----CCCcEEEEEc
Confidence 2333457899999999999865432211 111100 0 01111123444433211 1224788999
Q ss_pred eCCCC----C---C-CCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCccccc
Q 016429 197 DSGDY----S---T-VPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVR 268 (390)
Q Consensus 197 ds~~~----~---~-~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~ 268 (390)
|+... . . .+.......+..+|++||++.|++ .+.++.|+++|||++...... .
T Consensus 135 dt~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~------------~~~~~~iv~~h~~~~~~~~~~------~- 195 (302)
T d1utea_ 135 DTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA------------AKEDYVLVAGHYPVWSIAEHG------P- 195 (302)
T ss_dssp CHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH------------CCCSEEEEECSSCSSCCSSSC------C-
T ss_pred cceeEeecccccccccccccccchhHHHHHHHHHHHHHh------------hccCceEEEEeccccccCCCC------C-
Confidence 97311 0 0 011111222567899999999875 266789999999986421110 0
Q ss_pred CCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCC
Q 016429 269 QEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (390)
Q Consensus 269 ~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (390)
.......+..|+++++|+++||||+|..+.....+++..+.+++.+
T Consensus 196 ------~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~~~~~~~i~~g~g~ 241 (302)
T d1utea_ 196 ------THCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGN 241 (302)
T ss_dssp ------CHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSS
T ss_pred ------chhhhhhhhHHHHhcCceEEEeCCCcceEEEecCCccEEEEeCCCC
Confidence 0012356778888889999999999987666666777766655444
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.83 E-value=6.7e-20 Score=162.35 Aligned_cols=222 Identities=12% Similarity=0.043 Sum_probs=120.0
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhH-------------
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA------------- 109 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~------------- 109 (390)
+.||+++||+|... +.++.+.+.+++++||+||++|| +++...+..
T Consensus 2 ~~ri~~isD~h~~~--------------------~~l~~l~~~~~~~~~D~vli~GD-l~~~~~~~~~~~~~~~~~~~~~ 60 (257)
T d2yvta1 2 PRKVLAIKNFKERF--------------------DLLPKLKGVIAEKQPDILVVVGN-ILKNEALEKEYERAHLARREPN 60 (257)
T ss_dssp CCEEEEEECCTTCG--------------------GGHHHHHHHHHHHCCSEEEEESC-CCCCHHHHHHHHHHHHTTCCCC
T ss_pred CcEEEEEeCCCCCH--------------------HHHHHHHHHHhhcCCCEEEEecc-cCCCCCCCHHHHHHHHhhhhhc
Confidence 47999999999422 34577888888999999999999 555432211
Q ss_pred -----------HHHHHHHHhHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEec
Q 016429 110 -----------AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178 (390)
Q Consensus 110 -----------~~~~~~~l~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~ 178 (390)
...+..++..+.+.++|++++|||||.... ....+...... ..+. .......+ ....
T Consensus 61 ~~~~~~~~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~---~~~~~~~~~~~-----~~~~---~~~~~~~~-~~~~ 128 (257)
T d2yvta1 61 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAET-----AYPN---IRVLHEGF-AGWR 128 (257)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTT-----TCTT---EEECSSEE-EEET
T ss_pred eeeeccccccchhhHHHHHHHHHhcCCcEEEEeCCCcchhh---HHHHHhccccc-----cccc---ccccccee-EEec
Confidence 223445666677789999999999997321 11112111100 0000 00010111 1111
Q ss_pred cCCCCCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhh
Q 016429 179 GVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAY 258 (390)
Q Consensus 179 ~~~~~~~~~~~~~~l~~lds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~ 258 (390)
+ .+.+..+++..................+..|+...+. + ....+.|+++|+|+.....
T Consensus 129 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~Il~~H~pp~~~~~ 186 (257)
T d2yvta1 129 G----------EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVN---E---------LKPRRLVTIFYTPPIGEFV 186 (257)
T ss_dssp T----------TEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGG---G---------SCCCEEEEEESSCCSCSST
T ss_pred C----------CeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhh---h---------cccccEEEEEccccccccc
Confidence 1 1445555542111111100011122222333333221 1 3667899999998853211
Q ss_pred ccCCCcccccCCCCCCCCCChHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEE
Q 016429 259 FDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVA 338 (390)
Q Consensus 259 ~~~~~~~g~~~e~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei 338 (390)
.. ........++..+..+++..++++++|||+|.. . ...++.++++.|+... .+|.++++
T Consensus 187 ~~---------~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~-~-~~~g~~~~~~pGs~~~---------g~y~~id~ 246 (257)
T d2yvta1 187 DR---------TPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG-H-ELVGNTIVVNPGEFEE---------GRYAFLDL 246 (257)
T ss_dssp TC---------BTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE-E-EEETTEEEEECCBGGG---------TEEEEEET
T ss_pred cc---------cccchhhhhhHHHHHhhhhcCCcEEEEEeecCC-e-EecCCeEEEECCcccc---------CEEEEEEE
Confidence 00 001112345677788888778999999999983 3 3456777777654432 24566666
Q ss_pred e
Q 016429 339 S 339 (390)
Q Consensus 339 ~ 339 (390)
+
T Consensus 247 ~ 247 (257)
T d2yvta1 247 T 247 (257)
T ss_dssp T
T ss_pred e
Confidence 4
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=6.5e-20 Score=159.67 Aligned_cols=216 Identities=10% Similarity=-0.004 Sum_probs=122.9
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
...+|+.+||+|- ..+.++.+.+.++++++|+||++||++...........+ +..+.
T Consensus 4 ~~~~i~~~sd~hg--------------------~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~---~~~L~ 60 (228)
T d1uf3a_ 4 TVRYILATSNPMG--------------------DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAF---FRILS 60 (228)
T ss_dssp CCCEEEEEECCTT--------------------CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHH---HHHHG
T ss_pred cccEEEEEeCCCC--------------------CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHh---hhhhc
Confidence 4568999999993 345677777778889999999999955443333333333 33444
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCC
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~ 201 (390)
+.++|+++|+||||................. +. .......+.....+ +.+..+++...
T Consensus 61 ~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 118 (228)
T d1uf3a_ 61 EAHLPTAYVPGPQDAPIWEYLREAANVELVH--------PE---MRNVHETFTFWRGP-----------YLVAGVGGEIA 118 (228)
T ss_dssp GGCSCEEEECCTTSCSHHHHHHHHHHHHHHC--------TT---EEECBTSEEEETTT-----------EEEEEECSEEE
T ss_pred cccceEEEEecCCCchhhhhhhhhccccccc--------cc---ccccceeeeeccCC-----------EEEEecCCccc
Confidence 5789999999999974321111111111100 00 00001112222211 44555554221
Q ss_pred CCCCC-CCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChH
Q 016429 202 STVPS-VPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (390)
Q Consensus 202 ~~~~~-~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~ 280 (390)
..... ..........+..|+.+.++. ....+.|+++|+|+..... ...++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~l~~------------~~~~~~il~~H~p~~~~~~----------------~~~~~~ 170 (228)
T d1uf3a_ 119 DEGEPEEHEALRYPAWVAEYRLKALWE------------LKDYPKIFLFHTMPYHKGL----------------NEQGSH 170 (228)
T ss_dssp SSSCCBSSSSCEEEHHHHHHHHGGGGG------------SCSCCEEEEESSCBCBTTT----------------BTTSBH
T ss_pred cCcCcchhhhhhhhHHHHHHHHHHHhh------------ccCCceEEEEeeeccCccc----------------cccccH
Confidence 11111 112233566777877776432 2566789999998843110 013456
Q ss_pred HHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEecc
Q 016429 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASLE 341 (390)
Q Consensus 281 ~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~~~ 341 (390)
.+..+++..++++++|||+|.. . ...++.++++.|+.+ ..++.+++++..
T Consensus 171 ~~~~~~~~~~~~lvl~GH~H~~-~-~~~g~~~~v~pG~~~---------~g~y~~i~~~~~ 220 (228)
T d1uf3a_ 171 EVAHLIKTHNPLLVLVAGKGQK-H-EMLGASWVVVPGDLS---------EGEYSLLDLRAR 220 (228)
T ss_dssp HHHHHHHHHCCSEEEECCSSCE-E-EEETTEEEEECCBGG---------GTEEEEEETTTT
T ss_pred HHHHHHHhcCCcEEEEcccccc-h-hccCCEEEEECCccc---------cceEEEEEccCC
Confidence 6777777778999999999973 2 335566666554432 235778777643
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.73 E-value=2e-17 Score=151.95 Aligned_cols=244 Identities=16% Similarity=0.161 Sum_probs=122.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCC--hhhHHHHHHHHHhHhH
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD--ATDAAKSLNAAFAPAI 121 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~--~~~~~~~~~~~l~~~~ 121 (390)
|||+|+||+|+|...... +.... .....++.+.+.+.+++||+||++|| +++.. .......+.+.+..+.
T Consensus 1 Mkilh~SDlHlG~~~~~~-----~~~~~--~~~~~l~~iv~~a~~~~~D~vli~GD-lfd~~~~~~~~~~~~~~~~~~l~ 72 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGD-LFHSSRPSPGTLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESC-SBSSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCcCCCCCcCc-----hhHHH--HHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCCCCHHHHHHHHHHHhhHH
Confidence 799999999998643210 00000 01223444555556789999999999 54443 3344556667777777
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCCccccCccceeEEeccCCCCCCCCcceEEEEEEeCCCC
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lds~~~ 201 (390)
..++|+++++||||...... ...+.+...... ..+.... ..... ........+. . . . ++.....
T Consensus 73 ~~~i~v~~i~GNHD~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~-~------~-~-~~~~~~~-- 136 (333)
T d1ii7a_ 73 EHSIPVFAIEGNHDRTQRGP--SVLNLLEDFGLV-YVIGMRK-EKVEN-EYLTSERLGN-G------E-Y-LVKGVYK-- 136 (333)
T ss_dssp TTTCCEEEECCTTTCCSSSC--CHHHHHHHTTSC-EECEEES-SCCCS-SSEEEEECTT-S------C-E-EEEEEET--
T ss_pred hcCCcEEEeCCCCccccchh--hHHHHHHhCCce-EEccCcc-ccccc-ceecccccCc-c------e-e-EeecccC--
Confidence 78999999999999865433 122233222111 0000000 00000 0111111110 0 0 0 1111000
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHH
Q 016429 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (390)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~ 281 (390)
.....+..+......++....+.... ......+++.|+............. ... .
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~~h~~~~~~~~~~~~~~-----~~~-----~--- 191 (333)
T d1ii7a_ 137 --DLEIHGMKYMSSAWFEANKEILKRLF----------RPTDNAILMLHQGVREVSEARGEDY-----FEI-----G--- 191 (333)
T ss_dssp --TEEEEEECCCCHHHHHSSTTHHHHHC----------CCCSSEEEEEECCBHHHHHTTTCCC-----CSB-----C---
T ss_pred --cceeccccchhHHHHHHHHhhhhhhc----------CCCccceEEEeeccccccccccccc-----eec-----c---
Confidence 00000122344444444444333221 3567788999987755332221111 000 0
Q ss_pred HHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 282 ~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
..... .+++++++||.|.. .....+|.+++|+|+.....++..+...|+-++.+.
T Consensus 192 -~~~~~-~~~d~v~lGH~H~~-~~~~~~~~~i~y~GS~~~~~~~E~~~~~g~~~~~~~ 246 (333)
T d1ii7a_ 192 -LGDLP-EGYLYYALGHIHKR-YETSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFK 246 (333)
T ss_dssp -GGGSC-TTCSEEEEESCSSC-EEEEETTEEEEECCCSSCCSGGGCSEEEEECSSSEE
T ss_pred -cccCc-cccceEEecCcccc-eEEeeCCeEEEEeCCceeeccccccccCceEEEEEe
Confidence 11111 25899999999983 445568889999888765555544434444444433
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.52 E-value=1.9e-13 Score=113.89 Aligned_cols=60 Identities=10% Similarity=-0.091 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCC-CCCCCCCCceeEEEEEec
Q 016429 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH-AYGKAGWERRARVVVASL 340 (390)
Q Consensus 280 ~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~-~~~~~~~~~g~rv~ei~~ 340 (390)
..+..+.+..+.++++|||+|. ......+|..++..|+.+.. ........+.|-+++++.
T Consensus 97 ~~l~~~~~~~~~divi~GHTH~-p~~~~~~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~ 157 (182)
T d1z2wa1 97 ASLALLQRQFDVDILISGHTHK-FEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQA 157 (182)
T ss_dssp HHHHHHHHHHSSSEEECCSSCC-CEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEET
T ss_pred HHHHHHHhccCCCEEEECCcCc-ceEEEECCEEEEeCCCCCCCCCCCCCCCCCEEEEEEEeC
Confidence 3345555555799999999999 46667789988888777531 111112456788998873
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.48 E-value=1.1e-12 Score=107.72 Aligned_cols=63 Identities=22% Similarity=0.265 Sum_probs=46.3
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++||+|- ....++.+.+.++.++||.|+++||++ +. ..+..+.+.
T Consensus 1 MkI~iiSDiHg--------------------n~~al~~vl~~~~~~~~D~ii~~GD~~-~~----------~~~~~l~~~ 49 (165)
T d1s3la_ 1 MKIGIMSDTHD--------------------HLPNIRKAIEIFNDENVETVIHCGDFV-SL----------FVIKEFENL 49 (165)
T ss_dssp CEEEEECCCTT--------------------CHHHHHHHHHHHHHSCCSEEEECSCCC-ST----------HHHHHGGGC
T ss_pred CEEEEEEeCCC--------------------CHHHHHHHHHHHHhcCCCEEEECCCcc-CH----------HHHHHHhhc
Confidence 79999999992 234455666677788999999999954 32 112234456
Q ss_pred CCCEEEEeCCCCCC
Q 016429 124 NIPWVAVLGNHDQE 137 (390)
Q Consensus 124 ~ip~~~v~GNHD~~ 137 (390)
..|++++.||||..
T Consensus 50 ~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 50 NANIIATYGNNDGE 63 (165)
T ss_dssp SSEEEEECCTTCCC
T ss_pred CccEEEEccccccc
Confidence 78999999999974
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.42 E-value=1.9e-14 Score=126.43 Aligned_cols=82 Identities=6% Similarity=-0.041 Sum_probs=50.5
Q ss_pred CCCeEEEEecChhhhhhccCCCcccccCCCCCCCCCChHHHHHHHH-cCCeeEEEeccCCCCCcccccCCeEEEecCCCC
Q 016429 242 PAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (390)
Q Consensus 242 ~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~l~~-~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (390)
....++++|+++....... ..+......+..... ..++++++|||+|. ......++..++..|++|
T Consensus 129 ~~~~~~~~H~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~d~vv~GHtH~-~~~~~~~~~~~in~Gsvg 195 (251)
T d1nnwa_ 129 GGNEVFGVYGSPINPFDGE------------VLAEQPTSYYEAIMRPVKDYEMLIVASPMY-PVDAMTRYGRVVCPGSVG 195 (251)
T ss_dssp TTEEEEEESSCSSCTTTCC------------CCSSCCHHHHHHHHGGGTTSSEEEESTTCS-EEEEEETTEEEEEECCSS
T ss_pred CCCcEEEEecCccCcccch------------hhhhhHHHHHhhhcccccCceEEEEeccce-EEEEEeeeeecccccccc
Confidence 3457888998653311110 011223444444444 34789999999999 677778899988888888
Q ss_pred CCCCCCCCCCceeEEEEE
Q 016429 321 YHAYGKAGWERRARVVVA 338 (390)
Q Consensus 321 ~~~~~~~~~~~g~rv~ei 338 (390)
+...|. ....|-++|+
T Consensus 196 ~~~~g~--~~~~y~i~d~ 211 (251)
T d1nnwa_ 196 FPPGKE--HKATFALVDV 211 (251)
T ss_dssp SCSSSS--CCEEEEEEET
T ss_pred ccCCCC--CCCeEEEEEc
Confidence 654443 2345666654
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.39 E-value=5.8e-12 Score=105.96 Aligned_cols=60 Identities=15% Similarity=0.035 Sum_probs=43.0
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCC--CCCCCceeEEEEEec
Q 016429 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG--KAGWERRARVVVASL 340 (390)
Q Consensus 279 ~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~--~~~~~~g~rv~ei~~ 340 (390)
...+..+....++++++|||+|. .+....+|..++..|+.+. .++ ..+..+.|-+++++.
T Consensus 108 ~~~l~~~~~~~~~dvvi~GHTH~-~~~~~~~g~~~iNPGSvg~-pr~~~~~~~~~syaild~~~ 169 (193)
T d2a22a1 108 PGSLEQWQRRLDCDILVTGHTHK-LRVFEKNGKLFLNPGTATG-AFSALTPDAPPSFMLMALQG 169 (193)
T ss_dssp HHHHHHHHHHHTCSEEEECSSCC-CEEEEETTEEEEECCCSSC-CCCTTSTTCCCEEEEEEEET
T ss_pred HHHHHHHHhhcCCCEEEEcCccC-ceEEEECCEEEEECCCCCc-CcCCCCCCCCCEEEEEEEEC
Confidence 34566777667899999999999 5777789998888777752 221 122356788988874
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.23 E-value=2.3e-10 Score=94.16 Aligned_cols=56 Identities=14% Similarity=-0.044 Sum_probs=40.4
Q ss_pred HHHHHHHcCCeeEEEeccCCCCCcccccCCeEEEecCCCCCCCCCCCCCCceeEEEEEe
Q 016429 281 FFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (390)
Q Consensus 281 ~~~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~~~~~~~~~g~rv~ei~ 339 (390)
.+..+....+.+++++||+|. .+....+|+.++..|+.|..-.+. ....|-+++++
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~-p~~~~~~~~~~iNPGSvg~pr~~~--~~~syail~~~ 148 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHV-PSAWLEGKILFLNPGSISQPRGTI--RECLYARVEID 148 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCC-EEEEEETTEEEEEECCSSSCCTTC--CSCCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEeCCcCc-ceEEEECCEEEEECCCCCCCCCCC--CCCEEEEEEEe
Confidence 345555666799999999999 566678999999888887432221 23568888886
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=5.8e-11 Score=98.88 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=49.3
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhh--HHHHHHHHHhHh
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFAPA 120 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~--~~~~~~~~l~~~ 120 (390)
.|||+++||+|. ....++.+.+.++++++|.||++||++.....+. ........++.+
T Consensus 1 mMki~iiSDiHg--------------------~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~ 60 (184)
T d1su1a_ 1 MMKLMFASDIHG--------------------SLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERL 60 (184)
T ss_dssp CCEEEEECCCTT--------------------BHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH
T ss_pred CcEEEEEeecCC--------------------CHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHH
Confidence 389999999992 1234566777777889999999999554332111 001112233334
Q ss_pred HhCCCCEEEEeCCCCC
Q 016429 121 IASNIPWVAVLGNHDQ 136 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~ 136 (390)
...+.|++++.||||.
T Consensus 61 ~~~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 61 NEVAHKVIAVRGNCDS 76 (184)
T ss_dssp HTTGGGEEECCCTTCC
T ss_pred HhcCCcEEEecCCCCc
Confidence 4467799999999997
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.85 E-value=9.9e-09 Score=85.19 Aligned_cols=78 Identities=17% Similarity=0.194 Sum_probs=46.0
Q ss_pred EEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 46 ILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 46 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|-++||+|++...-...+... .-....+.+.+..++ .+.|.|+++||+..+.+..+. +.+.++. +
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~-------~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~---~~~~l~~---L 70 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEV-------RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE---YLRIWKA---L 70 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTT-------CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS---HHHHHHH---S
T ss_pred EEEEeCcCCCCcchhhcCCCC-------CHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH---HHHHHHH---C
Confidence 567999999865421111100 111233455555554 466999999996554433322 3344443 4
Q ss_pred CCCEEEEeCCCCC
Q 016429 124 NIPWVAVLGNHDQ 136 (390)
Q Consensus 124 ~ip~~~v~GNHD~ 136 (390)
+...+.|+||||.
T Consensus 71 ~g~~~lI~GNHD~ 83 (188)
T d1xm7a_ 71 PGRKILVMGNHDK 83 (188)
T ss_dssp SSEEEEECCTTCC
T ss_pred CCceEEEecCCCc
Confidence 6678999999997
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=7.8e-08 Score=87.32 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=48.2
Q ss_pred CeEEEEEecccccCCCCCCCCCCCcccccCCCCh-hH---HHHHHHHHHhcCCCE-EEEcCCcCCCCChhhHHHHHHHHH
Q 016429 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDL-NT---TAFINRMISAEKPDL-IVFTGDNIFGFDATDAAKSLNAAF 117 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~l~~~i~~~~pD~-Vv~~GD~i~~~~~~~~~~~~~~~l 117 (390)
+++|+|++|+|-.-.+.. ... ... .. ++.+.+..++.+++. ++.+||++.+.. ......-...+
T Consensus 8 ~ltILhtnD~Hg~l~~~~-~~~---------~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~-~s~~~~g~~~~ 76 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNE-YGE---------YGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVP-ESDLQDAEPDF 76 (337)
T ss_dssp EEEEEEECCCTTCCSCCT-TSC---------CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCH-HHHTTTTHHHH
T ss_pred EEEEEEEeecccCCcCCC-CCC---------cCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCH-HHHHhCChHHH
Confidence 488999999994322111 000 011 11 222333333456664 555899654432 11111111223
Q ss_pred hHhHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 016429 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKN 154 (390)
Q Consensus 118 ~~~~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 154 (390)
..|...+... +++||||+..+ .+.+.++......
T Consensus 77 ~~mn~~g~Da-~~~GNHEfd~G--~~~l~~~~~~~~~ 110 (337)
T d1usha2 77 RGMNLVGYDA-MAIGNHEFDNP--LTVLRQQEKWAKF 110 (337)
T ss_dssp HHHHHHTCCE-EECCGGGGSSC--HHHHHHHHHHCSS
T ss_pred HHHHhcCCeE-EEechhhhccc--hHHHHHHHHhcCc
Confidence 3333345554 56799999764 4456666655443
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.49 E-value=2.8e-07 Score=82.95 Aligned_cols=89 Identities=19% Similarity=0.266 Sum_probs=43.5
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCC-hhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHH----HHHHH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSD-LNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAA----KSLNA 115 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~----~~~~~ 115 (390)
++++|+|++|+|---.+.... +.....+.+ ......+.+..++..++ ++|.+||++.+..-.... ....+
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~----~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~ 85 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQ----PLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTP 85 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSC----GGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHH
T ss_pred CEEEEEEEeccccCCCCcccc----ccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHH
Confidence 689999999999532211100 000000001 11223344444556777 555699966543211110 11122
Q ss_pred HHhHhHhCCCCE-EEEeCCCCCCCC
Q 016429 116 AFAPAIASNIPW-VAVLGNHDQEST 139 (390)
Q Consensus 116 ~l~~~~~~~ip~-~~v~GNHD~~~~ 139 (390)
++. .+++ ++++||||+...
T Consensus 86 ~mn-----~lgyDa~t~GNHEfd~g 105 (322)
T d3c9fa2 86 IFI-----KQDYDLLTIGNHELYLW 105 (322)
T ss_dssp HHT-----TSCCSEECCCGGGSSSH
T ss_pred HHh-----ccCCcEEeecceecccc
Confidence 222 2344 567799999664
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.46 E-value=2.1e-05 Score=69.70 Aligned_cols=207 Identities=14% Similarity=0.083 Sum_probs=96.9
Q ss_pred CeEEEEEecccccCCCCC-CCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCcCCCCChhhHHHHHHHHHhHh
Q 016429 43 EFKILQVADMHFANGKTT-PCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (390)
Q Consensus 43 ~~ki~~iSDlH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~Vv~~GD~i~~~~~~~~~~~~~~~l~~~ 120 (390)
+++|+|++|+|-.-.+.. .+.. ..........+..+.+.++++.|+ +++-+||++.+..- .....-...+..+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~----~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~-~~~~~g~~~~~~~ 76 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSG----EKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY-FNQYRGLADRYFM 76 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSS----SEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-HHHHTTHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccC----CccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh-HhhhcchhHHHHH
Confidence 478999999994322100 0000 000001222333344444455554 77788996654421 1111111122222
Q ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCC--CCccc-cCccceeEE-eccCCCCCCCCcceEEEEEE
Q 016429 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPS--DAHII-DGFGNYNLE-IGGVKGSGFENKSVLNLYFL 196 (390)
Q Consensus 121 ~~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~g~~~y~~~-~~~~~~~~~~~~~~~~l~~l 196 (390)
...+. =+.++||||+..+ .+.+.+........+-.-+-. +.... ..+..|.+. +.| ..+-++.+
T Consensus 77 n~~gy-Da~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g---------~kIgiiG~ 144 (302)
T d2z1aa2 77 HRLRY-RAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGG---------ERVGIIGL 144 (302)
T ss_dssp HHTTC-CEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETT---------EEEEEEEE
T ss_pred Hhccc-ccccccchhhhcC--hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEECC---------eEEEEEec
Confidence 22333 3678999999764 455656554433222111110 00111 112234433 222 22556666
Q ss_pred eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCcccCCCCCeEEEEecChhhhhhccCCCcccccCCCCCCCC
Q 016429 197 DSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (390)
Q Consensus 197 ds~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~g~~~e~~~~~~ 276 (390)
-+...... ..+...+......+-+++..++++++ ...-+|++.|....+.
T Consensus 145 ~t~~~~~~-~~~~~~~~~~d~~~~~~~~~~~l~~~---------~~DiiV~l~H~g~~~d-------------------- 194 (302)
T d2z1aa2 145 TTPDTREI-SNPGPTVAFLDPYESAQKAVYELLAK---------GVNKIVVLSHLGYGED-------------------- 194 (302)
T ss_dssp ECTTHHHH-SCCCTTCEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH--------------------
T ss_pred cccccccc-ccccCcccccCHHHHHHHHHHHhhcc---------CCCEEEEeeccCcchh--------------------
Confidence 55321000 00111222222345566666666542 5678999999887431
Q ss_pred CChHHHHHHHH-cCCeeEEEeccCCCC
Q 016429 277 VNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (390)
Q Consensus 277 ~~~~~~~~l~~-~~~v~~v~~GH~H~~ 302 (390)
..|.+ -.+|++++.||.|..
T Consensus 195 ------~~la~~~~giD~ii~gh~h~~ 215 (302)
T d2z1aa2 195 ------LKLARRLVGVQVIVGGHSHTL 215 (302)
T ss_dssp ------HHHHTTCSSCCEEEECSSCCC
T ss_pred ------hHHHhcCCCeeeeecCcccee
Confidence 22322 247999999999973
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.42 E-value=4.6e-05 Score=63.95 Aligned_cols=64 Identities=27% Similarity=0.220 Sum_probs=40.5
Q ss_pred EEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 45 KILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 45 ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
||.+|||+|- ....++.+.+.+.. ...|.+|++||+|.... +..+.+ .-+ .
T Consensus 14 rI~vIgDIHG--------------------~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp--~s~~vl----~~l--~ 65 (219)
T d1g5ba_ 14 NIWVVGDLHG--------------------CYTNLMNKLDTIGFDNKKDLLISVGDLVDRGA--ENVECL----ELI--T 65 (219)
T ss_dssp CEEEECCCTT--------------------CHHHHHHHHHHHTCCTTTCEEEECSCCSSSSS--CHHHHH----GGG--G
T ss_pred eEEEEEeccc--------------------CHHHHHHHHHHcCCCCCCCEEEEeCCccccCc--cHHHHH----HHh--h
Confidence 7999999992 22334444444442 45689999999665443 333222 222 2
Q ss_pred CCCEEEEeCCCCC
Q 016429 124 NIPWVAVLGNHDQ 136 (390)
Q Consensus 124 ~ip~~~v~GNHD~ 136 (390)
...+.++.||||.
T Consensus 66 ~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 66 FPWFRAVRGNHEQ 78 (219)
T ss_dssp STTEEECCCHHHH
T ss_pred ccccccccCcHHH
Confidence 3468999999996
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=94.63 E-value=0.1 Score=43.88 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=50.9
Q ss_pred CCeEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhH
Q 016429 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (390)
Q Consensus 42 ~~~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~ 121 (390)
..|||+++.|+=-..+- ....+.|.++.++.++||||..|-..++.... ..+.+.+.+
T Consensus 3 ~~MkILfiGDIvG~~GR-----------------~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Gi-t~k~~~eL~---- 60 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGR-----------------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-SLKHYEFLK---- 60 (281)
T ss_dssp CCCEEEEECEEBHHHHH-----------------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-CHHHHHHHH----
T ss_pred ccceEEEEEccCCHHHH-----------------HHHHHHhHHHHHHhCCCEEEECCccCCCCcCC-CHHHHHHHH----
Confidence 57999999999643321 11224455666678999999999977654321 122333333
Q ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHH
Q 016429 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (390)
Q Consensus 122 ~~~ip~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (390)
+.++.++ +.|||=+.. .++.+++.+
T Consensus 61 ~~GvDvI-T~GNH~wd~----kei~~~i~~ 85 (281)
T d1t71a_ 61 EAGVNYI-TMGNHTWFQ----KLDLAVVIN 85 (281)
T ss_dssp HHTCCEE-ECCTTTTCC----GGGHHHHTT
T ss_pred HhCCcEE-EcCchhhhc----hhhHHHHhh
Confidence 3577764 779996533 244455544
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=93.60 E-value=1.5 Score=35.94 Aligned_cols=105 Identities=16% Similarity=0.207 Sum_probs=56.1
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++.|+=-..+ .+.++.....++ ++.||||..|...++.... ..+.+.+.+ +.
T Consensus 1 MkILfiGDIvG~~G------------------r~~v~~~Lp~lk-~~~DfVIaNgENaa~G~Gi-t~~~~~~l~----~~ 56 (255)
T d1t70a_ 1 MRVLFIGDVFGQPG------------------RRVLQNHLPTIR-PQFDFVIVNMENSAGGFGM-HRDAARGAL----EA 56 (255)
T ss_dssp CEEEEECCBBHHHH------------------HHHHHHHHHHHG-GGCSEEEEECTBTTTTSSC-CHHHHHHHH----HH
T ss_pred CeEEEEecCCCHHH------------------HHHHHHHhHHHH-hhCCEEEECCccCCCCcCC-CHHHHHHHH----Hc
Confidence 78999999864321 223333333333 3579999999977665321 122333333 35
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCCC--ccccCccceeEEecc
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDA--HIIDGFGNYNLEIGG 179 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~g~~~y~~~~~~ 179 (390)
++.++ +.|||=+.. .++.+++.+.+..+ ..|... ....|.+.+.+...+
T Consensus 57 GvDvi-T~GNH~wdk----kei~~~i~~~~~~i--lRP~N~p~~~~PG~G~~i~~~~g 107 (255)
T d1t70a_ 57 GAGCL-TLGNHAWHH----KDIYPMLSEDTYPI--VRPLNYADPGTPGVGWRTFDVNG 107 (255)
T ss_dssp TCSEE-ECCTTTTSS----TTHHHHHHTTCSCE--ECCSCCCCTTCSSCSEEEEECSS
T ss_pred CCcEE-EcCchhhcc----hhHHHHHhhcchhh--hhhhccCCCCCCCceEEEEeecc
Confidence 77764 779996643 24556554322111 222221 124566666665543
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=93.47 E-value=1.6 Score=35.63 Aligned_cols=103 Identities=23% Similarity=0.337 Sum_probs=56.4
Q ss_pred eEEEEEecccccCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCcCCCCChhhHHHHHHHHHhHhHhC
Q 016429 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (390)
Q Consensus 44 ~ki~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~Vv~~GD~i~~~~~~~~~~~~~~~l~~~~~~ 123 (390)
|||+++.|+=-..+ .+.++.....++ ++.||||..|...++.... ..+.+.+.+ +.
T Consensus 1 MkiLfiGDIvG~~G------------------r~~v~~~Lp~Lk-~~~DfVIaNgENaa~G~Gi-t~k~~~~L~----~~ 56 (252)
T d2z06a1 1 MRVLFIGDVMAEPG------------------LRAVGLHLPDIR-DRYDLVIANGENAARGKGL-DRRSYRLLR----EA 56 (252)
T ss_dssp CEEEEECCBCHHHH------------------HHHHHHHHHHHG-GGCSEEEEECTTTTTTSSC-CHHHHHHHH----HH
T ss_pred CeEEEEeccCCHHH------------------HHHHHHHhHHHH-hhCCEEEEeeeccCCCcCC-CHHHHHHHH----Hh
Confidence 78999999863321 223333333333 3579999999976654321 122333333 35
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHcCCCccccCCCC-CccccCccceeEEecc
Q 016429 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSD-AHIIDGFGNYNLEIGG 179 (390)
Q Consensus 124 ~ip~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~g~~~y~~~~~~ 179 (390)
++.++ +.|||=+... ++.++..+.+ ...|.+ .....|.|.+.+...+
T Consensus 57 GVDvI-T~GNH~wdkk----ei~~~i~~~~----llRP~N~p~~~PG~G~~i~~~~g 104 (252)
T d2z06a1 57 GVDLV-SLGNHAWDHK----EVYALLESEP----VVRPLNYPPGTPGKGFWRLEVGG 104 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHHSS----EECCTTSCSSCSSCSEEEEEETT
T ss_pred CCCEE-EcCcccccch----hhhhhhcccc----ccchhhccCCCCCCcEEEEccCC
Confidence 77764 7799976443 3445554422 223332 1235566766666544
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.24 E-value=0.23 Score=42.91 Aligned_cols=25 Identities=4% Similarity=0.202 Sum_probs=21.0
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCC
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHV 301 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~ 301 (390)
.+...++.+++..++++++-||.=.
T Consensus 231 FG~~~~~~Fl~~n~l~lIIR~He~v 255 (324)
T d1s95a_ 231 FGPDVTKAFLEENNLDYIIRSHEVK 255 (324)
T ss_dssp ECHHHHHHHHHHHTCCEEEECCSCC
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccc
Confidence 4567889999999999999999744
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.08 E-value=0.14 Score=43.62 Aligned_cols=59 Identities=14% Similarity=0.052 Sum_probs=34.4
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCC-cccccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVND-FCGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~-~~~~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~~ 340 (390)
.+....+++++..++++++-||.=..+ +....+|--+..-+++.|.+ +++ .+-++.|+.
T Consensus 215 fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kviTiFSa~~Y~~~~~N-----~~a~l~i~~ 275 (288)
T d3c5wc1 215 FGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGN-----QAAIMELDD 275 (288)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEEEGGGTEEEEBCCTTGGGTSCC-----CEEEEEECT
T ss_pred cCHHHHHHHHHHCCCcEEEcCCCcCCCCCeecCCCcEEEEecCCCccCCCCc-----ceEEEEECC
Confidence 456778999999999999999874422 22233332111223344532 332 355777874
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=92.47 E-value=0.19 Score=42.89 Aligned_cols=59 Identities=8% Similarity=0.108 Sum_probs=35.7
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCC-cccccCCeEEEecCCCCCCC-CCCCCCCceeEEEEEec
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVND-FCGRLTGIQLCYGGGFGYHA-YGKAGWERRARVVVASL 340 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~-~~~~~~gi~~~~~~~~g~~~-~~~~~~~~g~rv~ei~~ 340 (390)
.+...++.++++.++++++-||.=..+ +....+|--+..-+++.|.+ +++ .+-++.|+.
T Consensus 222 fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~viTiFSa~nY~~~~~N-----~gail~i~~ 282 (294)
T d1jk7a_ 222 FGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDN-----AGAMMSVDE 282 (294)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTGGGTCCC-----CEEEEEECT
T ss_pred cCHHHHHHHHHHCCCCEEEEcCccccCCcEEecCCcEEEEecCCCcCCCCCc-----cEEEEEECC
Confidence 466788999999999999999987633 22223332222223445543 332 355888874
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.98 E-value=0.31 Score=44.14 Aligned_cols=28 Identities=4% Similarity=0.095 Sum_probs=23.0
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCCc
Q 016429 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDF 304 (390)
Q Consensus 277 ~~~~~~~~l~~~~~v~~v~~GH~H~~~~ 304 (390)
.+...+..+++..++++++-||.=..+.
T Consensus 247 FG~~a~~~FL~~n~L~~IIR~HE~~~~G 274 (473)
T d1auia_ 247 YSYPAVCEFLQHNNLLSILRAHEAQDAG 274 (473)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTS
T ss_pred EChHHHHHHHHHcCCcEEEEcCcchhhh
Confidence 4557789999999999999999977443
|