Citrus Sinensis ID: 016435

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKKLGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVEDSVEAETRRLAELNRRGDGYDGRNDASVSAVQSSDYPEQESSDYNGSSCGSGLLNSQLDGEQVGGQCNSRRDFQNEYSPEETGETTPYFLTSKSDEGVYVEDGSDANSETESFNEWVNMVFDYQILKEDIRSL
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEEEcEEEccccccccccccccEEEEEcccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHccccccccEEEEEccccccccccccccccccccEEEcccccccHcccccccEEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccEEEEEcEEEEEEccccc
Coil and Loop (DISEMBL)
mdslvgfrfhptDEEIILLLTMkrrdptgfsvrtikeidlysfeprelpchsdiqseEEVWYFFcepcyknseskrvhrrtkegywkktgrgsninrkyktevIGTKKFLSFSRDDAAAQKNTTEWVIHEIavedspdfkkDFVVCRLERkrekktlgvvstkrkrektlgvvsskrkrdkklgvstsdgdqscqnltskrshvaedsnrnhvaEKVDLVSTRnhvaenivlvpepqvrdhsiscyRNHVAENIVEDSVEAETRRLAELNrrgdgydgrndasvsavqssdypeqessdyngsscgsgllnsqldgeqvggqcnsrrdfqneyspeetgettpyfltsksdegvyvedgsdansetesFNEWVNMVFDYQILKEDIRSL
Flexible Loop (DISEMBL)
mdslvgfrfhpTDEEIILLltmkrrdptgfSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPcyknseskrvhrrtkegywkktgrgsninrkyktevigtkkflsfsrddaaaqkNTTEWVIHeiavedspdfkkDFVVCrlerkrekktlgvvstkrkrektlgvvsskrkrdkklgvstsdgdqscqnltskrshvaedsnrnhVAEKVDLVSTRNHVAenivlvpepqvrdHSISCYRNHVaenivedsveAETRRLAElnrrgdgydgrndASVSAVQSSDYPEQESSDYNGSSCGSGLLNSQLDGEQVGGQCNSRRDFqneyspeetgettpyfltsksDEGVYVEDGSDANsetesfnewvnMVFDYQILKEDIRSL
Low Complexity Region (SEG)
MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKKLGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVEDSVEAETRRLAELNRRGDGYDGRNDASVSAVQSSDYPEQESSDYngsscgsgllnsQLDGEQVGGQCNSRRDFQNEYSPEETGETTPYFLTSKSDEGVYVEDGSDANSETESFNEWVNMVFDYQILKEDIRSL
Disordered region (IsUnstruct)
****VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKN***********EGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLE*******************************************************************VDLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVE****************************************************************************************************************FNEWVNMVFDYQILK******
Disordered Region (DISOPRED)
MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLER**************************************************************************************************HVA*********************************************************************************Y***ETGETTPYFLTSKSDEGV***************NEWVNMVFDYQILKEDI***
Disordered Region (DISEMBL)
MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNS*********KEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLG**************************************LTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVEDSVEAETRRLAELNRRGDGYDGRND***********************CGSGLLNSQLDGEQVGGQCNSRRDFQN*********TTPYFLTSKSDEGVYV**********ESFNEWVNMVFDYQILKEDIRSL
Disordered Region (DISPRO)
*DSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKRE****************************************************************DLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVEDSVEAETRRLAEL*****G***RNDASVSAVQSSDYPEQESSDYNGSSCGSGLLN****************DFQNEYSPEETGETTPYFLTSKSDEGVYVEDGSDANSETESFNEWVNMVFDYQILKED****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKKLGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAENIVLVPEPQVRDHSISCYRNHVAENIVEDSVEAETRRLAELNRRGDGYDGRNDASVSAVQSSDYPEQESSDYNGSSCGSGLLNSQLDGEQVGGQCNSRRDFQNEYSPEETGETTPYFLTSKSDEGVYVEDGSDANSETESFNEWVNMVFDYQILKEDIRSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	389	2.2.26 [Sep-21-2011]
Q9FLJ2	336	NAC domain-containing pro	no	no	0.375	0.434	0.392	3e-20
Q94F58	340	NAC domain-containing pro	no	no	0.367	0.420	0.378	1e-19
O81913	359	NAC domain-containing pro	no	no	0.434	0.470	0.367	6e-19
Q9M126	457	NAC domain-containing pro	no	no	0.372	0.317	0.365	1e-18
Q7GCL7	489	NAC domain-containing pro	no	no	0.372	0.296	0.333	1e-18
O81914	362	NAC domain-containing pro	no	no	0.403	0.433	0.351	3e-18
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.385	0.491	0.371	3e-18
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.370	0.422	0.366	6e-18
Q5CD17	396	NAC domain-containing pro	no	no	0.372	0.366	0.333	6e-18
A0SPJ4	405	NAC transcription factor	N/A	no	0.385	0.370	0.329	8e-18

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 12/158 (7%)

Query: 1   MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEV 60
           MD   GFRFHPTDEE+I     K+   T FS + I E+DL   EP ELP  + +  +E  
Sbjct: 14  MDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKE-- 71

Query: 61  WYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQ 120
           WYFFC    K     R +R T+ GYWK TG+   I R     ++G KK L F R   A +
Sbjct: 72  WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR--GKSLVGMKKTLVFYR-GRAPK 128

Query: 121 KNTTEWVIHEIAVED-------SPDFKKDFVVCRLERK 151
              T WV+HE  +E            K ++V+CR+ +K
Sbjct: 129 GQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GF+F PTD E+I     ++ D    SV  I ++++Y+FEP +LP  S ++S+ E W+FFC
Sbjct: 24  GFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSE-WFFFC 82

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K     +  R TK GYWK TG+  ++  K  +EVIGTK+ L F     A +   T+
Sbjct: 83  ARGKKYPHGSQNRRATKMGYWKATGKERDV--KSGSEVIGTKRTLVF-HIGRAPKGERTD 139

Query: 126 WVIHEIAVEDSPDFKKDFVVCRLERKRE 153
           W++HE  V+         VVCR+ R +E
Sbjct: 140 WIMHEYCVKGV-SLDDAMVVCRVRRNKE 166

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 95.5 bits (236), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 8/177 (4%)

Query: 1   MDSLVGFRFHPTDEEII-LLLTMKRRDP-TGFSVRTIKEIDLYSFEPRELPCHSDIQSEE 58
           M + VGFRF P DEEI+   L  K  D  T      I  +D+ SFEP +LP  S I+S +
Sbjct: 1   MMNPVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query: 59  EVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKT-EVIGTKKFLSFSRDDA 117
            VWYFF     K +   +  RRT  G+WKKTG+   + RK    E IG K+ L F   D 
Sbjct: 61  GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDG 120

Query: 118 AAQKNTTEWVIHEI-AVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVV 173
           +     T+WV+HE  A    P+    + VC++E K E+  +   ST  + E+   ++
Sbjct: 121 SK----TDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQIHSLI 173

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M126|NAC69_ARATH NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 11/156 (7%)

Query: 4   LVGFRFHPTDEEII-LLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWY 62
           LVG+RF+PT EE+I   L  K    T      I EI++ S++P  LP  S I+S++ VWY
Sbjct: 5   LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWY 64

Query: 63  FFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEV-----IGTKKFLSFSRDDA 117
           FFC   Y +++ K   R T  GYWK TG    ++RK K +      IG KK L +  +  
Sbjct: 65  FFCPKEYTSAKKKVTKRTTSSGYWKATG----VDRKIKDKRGNRGEIGIKKTLVY-YEGR 119

Query: 118 AAQKNTTEWVIHEIAVEDSPDFKKDFVVCRLERKRE 153
             +   T WV+HE  +   P  ++++V+C++  K E
Sbjct: 120 VPKGVWTPWVMHEYHITCLPQDQRNYVICQVMYKGE 155

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GF FHP D E+I     K+          I E+D+Y  EP +LP   D+ +++  W+FF 
Sbjct: 12  GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFA 71

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K     R +R T  GYWK TG+   I  K   + IGTKK L F        +  TE
Sbjct: 72  ARDRKYPNGSRSNRATVAGYWKSTGKDRAI--KMGKQTIGTKKTLVFHEGRPPTGRR-TE 128

Query: 126 WVIHEIAVED-----SPDFKKDFVVCRLERKRE 153
           W++HE  +++      PD K  +V+CR+ ++ +
Sbjct: 129 WIMHEYYIDERECQACPDMKDAYVLCRITKRND 161

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O81914|NAC5_ARATH NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 8/165 (4%)

Query: 1   MDSLVGFRFHPTDEEI--ILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEE 58
           M + VGFRF PTD EI  I L        T      I  +D+ SF+P +LP HS +++ +
Sbjct: 1   MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRD 60

Query: 59  EVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKT-EVIGTKKFLSFSRDDA 117
           +VWYFF     K  +  R  R+TK G+WKKTG   +I RK    E IG K+ L F     
Sbjct: 61  QVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGG 120

Query: 118 AAQKNTTEWVIHEI-AVEDSPDFKKDFVVCRLERKREKKTLGVVS 161
           +     ++W +HE  A   SP+    + +C+++ K E++   V +
Sbjct: 121 SK----SDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVAT 161

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQS-EEEVWYFF 64
           GFRFHPTDEE++     K+     F +  IKE+DL   EP +L     I S  +  WYFF
Sbjct: 11  GFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
                K     R +R T  G+WK TGR   I   YK   IG +K L F +   A     T
Sbjct: 71  SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKK--IGMRKTLVFYK-GRAPHGQKT 127

Query: 125 EWVIHEIAVEDSPD--FKKDFVVCRLERKREKKTLG 158
           +W++HE  +ED+ D   +  +VVCR+ +K+    +G
Sbjct: 128 DWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG 163

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQS-EEEVWYFF 64
           GFRFHPTDEE++     K+     F +  I+E+DL   EP +L     I S  +  WYFF
Sbjct: 12  GFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEWYFF 71

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
                K     R +R T  G+WK TGR   I   YK   IG +K L F +   A     T
Sbjct: 72  SHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKK--IGMRKTLVFYK-GRAPHGQKT 128

Query: 125 EWVIHEIAVEDSPDFKKD-----FVVCRLERKR 152
           +W++HE  +ED+ D + +     +VVCR+  K+
Sbjct: 129 DWIMHEYRLEDADDPQANPSEDGWVVCRVFMKK 161

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5CD17|NAC77_ORYSJ NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2

 Score = 92.0 bits (227), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 26/171 (15%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRFHPTD E+IL   +++     F+   I E+DL   EP +LP  + +  +E  WYFF 
Sbjct: 22  GFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKE--WYFFS 79

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKY--------------KTEVIGTKKFLS 111
               K     R +R TKEGYWK TG+   I R+               K +++G KK L 
Sbjct: 80  HKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLV 139

Query: 112 FSRDDAAAQKNTTEWVIHEIAVEDS-----PDF----KKDFVVCRLERKRE 153
           F     A +   T WV+HE  +  +     P+     K ++VVC++  K++
Sbjct: 140 FYMGR-APKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQ 189

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score = 91.7 bits (226), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 78/179 (43%), Gaps = 29/179 (16%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRFHPTDEE+++    K+ D     V  I E+DLY F+P ELP  + I  +E  WYFF 
Sbjct: 37  GFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQE--WYFFS 94

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGR-----GSNINRKYKTEVIGTKKFLSFSRDDAAAQ 120
               K     R +R    GYWK TG       S        E +G KK L F R     +
Sbjct: 95  PRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGK-PPK 153

Query: 121 KNTTEWVIHEIAVEDS----------PDFKK-----------DFVVCRLERKREKKTLG 158
              T W++HE  + D+          P               D+V+CR+ +K  K   G
Sbjct: 154 GLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKKINKAAAG 212

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
296089037	335	unnamed protein product [Vitis vinifera]	0.385	0.447	0.422	6e-25
225453680	560	PREDICTED: uncharacterized protein LOC10	0.385	0.267	0.422	8e-25
224130704	464	NAC domain protein, IPR003441 [Populus t	0.562	0.471	0.345	4e-24
356522462	497	PREDICTED: NAC domain-containing protein	0.393	0.307	0.428	2e-23
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.473	0.173	0.374	6e-23
357155421	433	PREDICTED: uncharacterized protein LOC10	0.372	0.334	0.406	1e-21
358346553	470	NAC domain protein [Medicago truncatula]	0.377	0.312	0.416	2e-21
359489481	997	PREDICTED: uncharacterized protein LOC10	0.406	0.158	0.375	6e-21
255548099	213	hypothetical protein RCOM_1340980 [Ricin	0.365	0.666	0.414	7e-21
297800286	261	predicted protein [Arabidopsis lyrata su	0.421	0.628	0.377	8e-21

>gi|296089037|emb|CBI38740.3| unnamed protein product [Vitis vinifera]

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 4/154 (2%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
           VGFRFHPTDEE++      +       V  I E+D+  +EP +LP  S IQ+ +  W+FF
Sbjct: 8   VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 67

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
           C P YK    +R +R T+ GYWK TG+  NI  +   E++GTKK L F R   A Q   T
Sbjct: 68  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGR-APQSVRT 126

Query: 125 EWVIHE--IAVEDSPDFKKDFVVCRLERKREKKT 156
            WV+HE   A+   P   K +V+CRL+RK ++ T
Sbjct: 127 NWVMHEYRAAIASLPA-NKAYVLCRLKRKTDENT 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 4/154 (2%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
           VGFRFHPTDEE++      +       V  I E+D+  +EP +LP  S IQ+ +  W+FF
Sbjct: 16  VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 75

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
           C P YK    +R +R T+ GYWK TG+  NI  +   E++GTKK L F R   A Q   T
Sbjct: 76  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYR-GRAPQSVRT 134

Query: 125 EWVIHE--IAVEDSPDFKKDFVVCRLERKREKKT 156
            WV+HE   A+   P   K +V+CRL+RK ++ T
Sbjct: 135 NWVMHEYRAAIASLPA-NKAYVLCRLKRKTDENT 167

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130704|ref|XP_002320907.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222861680|gb|EEE99222.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 5   VGFRFHPTDEEII-LLLTMKRRDPTGFSVRTIKEID-LYSFEPRELPCHSDIQSEEEVWY 62
           VG+RFHPT+EEII   L+ K           I EID LY ++P +LP    IQS + VWY
Sbjct: 4   VGYRFHPTEEEIIDHYLSCKLNGLDSLVDAYIGEIDHLYQWDPWDLPV---IQSNDRVWY 60

Query: 63  FFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKN 122
           FFC   YK   SKRV+R TK G WK TG+  NI R+   EVIGTKK L F      ++K 
Sbjct: 61  FFCRHDYKFPNSKRVNRTTKNGNWKLTGKVRNITRRGTNEVIGTKKNLVFLHKCPDSKK- 119

Query: 123 TTEWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKK 182
            T WVIHE   +  P  ++  V+C+L+ K +       + +      L V + +R     
Sbjct: 120 -TRWVIHEFQAKTPPPDERAIVLCKLKNKADDSAANSPNDEGAETNILEVDAEQRLSLFN 178

Query: 183 LGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAE 228
                S+     Q+L + +++++++ + N  +    L++ +N+ ++
Sbjct: 179 SQREDSNFPSPLQSLINAQNYLSDEEDFNFPSPLQSLINAQNYFSD 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 1/154 (0%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
           VGFRF PTDEE++      +     F V  I EIDL   EP ++P  S I+S++  W+FF
Sbjct: 14  VGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPERSVIKSDDPEWFFF 73

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
               YK  +SKR +R TK GYWK TG   N+     + VIGTKK L F  +    +   T
Sbjct: 74  SPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVF-HEGRGPRGVKT 132

Query: 125 EWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLG 158
            WVIHE     S + ++ FV+CRL +K EKK  G
Sbjct: 133 NWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEG 166

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
           VGFRF PTDEE++      +     F V  I EIDL   EP ++P  S I+S++  W+FF
Sbjct: 13  VGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPGRSVIKSDDPEWFFF 72

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
               YK  +SKR +R TK G+WK TG    I     + VIGTKK L F +     +   T
Sbjct: 73  SPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVFHQ-GRVPRGAKT 131

Query: 125 EWVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKR--KREKTLGVVSSKRKRDKK 182
            WVIHE     S + ++ FV+CRL +K EKK  G +      + E ++ +VS      + 
Sbjct: 132 NWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPSFDEGEPSIHMVSDYGNPARA 191

Query: 183 LGVSTSD 189
            G+++ D
Sbjct: 192 EGIASVD 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357155421|ref|XP_003577114.1| PREDICTED: uncharacterized protein LOC100831585 [Brachypodium distachyon]

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 10/155 (6%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRFHPTDEE+I+   + +     F+ R +  +D+YS EPR+LP  S+ +  E+ WYFF 
Sbjct: 22  GFRFHPTDEEVIVHYLLPKVLYPAFACRAVTVVDIYSCEPRDLP--SEARMGEKEWYFFV 79

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K   S R +R TKEGYWK TGR  +I  +   E+IG KK L F    A A    T+
Sbjct: 80  PKGLKYPTSSRANRATKEGYWKSTGRDKDIFGECTRELIGMKKSLVFYMGRAPAGVK-TD 138

Query: 126 WVIHEIAVED-SPDF------KKDFVVCRLERKRE 153
           WV+HE  +   + D+      K ++VVC++  K E
Sbjct: 139 WVMHEFRLHGRTRDWVIVNGQKDEWVVCKVFNKGE 173

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346553|ref|XP_003637331.1| NAC domain protein [Medicago truncatula] gi|358346878|ref|XP_003637491.1| NAC domain protein [Medicago truncatula] gi|355503266|gb|AES84469.1| NAC domain protein [Medicago truncatula] gi|355503426|gb|AES84629.1| NAC domain protein [Medicago truncatula]

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 87/156 (55%), Gaps = 9/156 (5%)

Query: 5   VGFRFHPTDEEII-LLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYF 63
           VGFRF PT EE++   L  K           I E+D+  FEP ELP  S I+S+++ W+F
Sbjct: 195 VGFRFCPTGEELVNHYLRNKLLGNDAIVNNVIAEVDIRKFEPWELPARSVIKSDDQEWFF 254

Query: 64  FCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNT 123
            C   YK ++SKR  R T  G+WK TG   NI  +   EVIG KK L +  +     K  
Sbjct: 255 LCPIEYKYAKSKRFKRTTNNGFWKATGMDRNIRIRGTNEVIGIKKTLVYHENHVPGVK-- 312

Query: 124 TEWVIHE---IAVEDSPDFKKDFVVCRLERKREKKT 156
           T W+IHE   + +EDS   ++ FV+CRL +K EK T
Sbjct: 313 TNWIIHEYHDVTLEDS---QRTFVLCRLMKKFEKNT 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489481|ref|XP_002268822.2| PREDICTED: uncharacterized protein LOC100262652 [Vitis vinifera]

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 95/181 (52%), Gaps = 23/181 (12%)

Query: 5   VGFRFHPTDEEII------LLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEE 58
           VGFRFHPTDEE++       +L M  +      V  I E+D+  +EP ELP  S +Q+++
Sbjct: 574 VGFRFHPTDEELVDRHLKPKILGMDSQ------VEIIPEVDICKWEPWELPGFSVLQTDD 627

Query: 59  EVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSF--SRDD 116
             W+FF     K     +  R TK GYWK TG G +I  +   EVIGT+K L+F   R  
Sbjct: 628 LEWFFFSPLHKKYQNGSQFKRATKAGYWKPTGLGRDILSRTNKEVIGTRKTLNFYEGRGR 687

Query: 117 AAAQKNTTEWVI-----HEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLG 171
           AA     T WVI     H   +   P  K+ +V+CRL+RK++KKT   + T  +     G
Sbjct: 688 AAV---LTNWVIYQYQYHRSDIASLPS-KRAYVLCRLKRKKDKKTGSYIPTPDEAVAGTG 743

Query: 172 V 172
           +
Sbjct: 744 I 744

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548099|ref|XP_002515106.1| hypothetical protein RCOM_1340980 [Ricinus communis] gi|223545586|gb|EEF47090.1| hypothetical protein RCOM_1340980 [Ricinus communis]

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 10/152 (6%)

Query: 1   MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSE--E 58
           MD+ +G+RFHP+D E++     ++       V  I EI + SFEP ELP HS + S   +
Sbjct: 1   MDTGIGYRFHPSDLELVDHYLRQKMLGNDDEVWQIPEISVLSFEPWELPQHSIMLSNPND 60

Query: 59  EVWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAA 118
           +VWYFFC P YK S SKRV R T  GYWK TG+    +RK K   I  KK L F +    
Sbjct: 61  QVWYFFCTPNYKYSNSKRVDRTTTAGYWKVTGK----DRKIKD--IAIKKTLVFYQGRPK 114

Query: 119 AQKNTTEWVIHEIAVEDSPDFKKDFVVCRLER 150
             +  T WV+HE +   +   ++DFV+C+++R
Sbjct: 115 GVR--TNWVMHEYSPTFNFPTERDFVICKIKR 144

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800286|ref|XP_002868027.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313863|gb|EFH44286.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 91/172 (52%), Gaps = 8/172 (4%)

Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRFHPTDEE+I     ++ +     +  I  IDLY F+P ELP  S + + +  W+FFC
Sbjct: 9   GFRFHPTDEELIGYYLSRKVEGLEIELEVIPVIDLYKFDPCELPDKSFLPNRDLEWFFFC 68

Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K +   R +R TK GYWK TG+   I  K    + G +K L F  +  A   + T 
Sbjct: 69  PRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVITGYRKTLVF-YEGRAPLGDRTN 127

Query: 126 WVIHEIAVED------SPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLG 171
           W +HE  + D      SP+ K  FV+CR+ +K E KT  + S K K E+ +G
Sbjct: 128 WFMHEYRLCDDDHSQKSPNVKGAFVLCRVVKKNELKT-NLKSLKNKNEQDIG 178

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	389
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.419	0.558	0.372	8.2e-26
TAIR|locus:2141075	262	NAC071 "NAC domain containing	0.578	0.858	0.314	9.7e-25
TAIR|locus:2176362	340	NAC089 "NAC domain containing	0.534	0.611	0.337	1.8e-23
TAIR|locus:2039600	335	NTL8 "NTM1-like 8" [Arabidopsi	0.493	0.573	0.328	2.1e-22
TAIR|locus:2114678	469	NAC062 "NAC domain containing	0.508	0.422	0.353	5.6e-22
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.411	0.445	0.380	1.2e-21
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.383	0.488	0.382	2e-21
TAIR|locus:2095730	335	NAC060 "NAC domain containing	0.362	0.420	0.402	2e-21
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.532	0.659	0.314	2.7e-21
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.372	0.440	0.408	2.7e-21

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
 Identities = 64/172 (37%), Positives = 91/172 (52%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GFRFHPTDEE+I     ++ +     +  I  IDLYSF+P ELP  S + + +  WYFFC
Sbjct:     9 GFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFC 68

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
                 K     R +R TK GYWK TG+   I  +  + +IG +K L F +  A    + + 
Sbjct:    69 SRDKKYPNGFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYKGRAPLG-DRSN 126

Query:   126 WVIHEIAVED------SPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLG 171
             W++HE  + D      S + K  FV+CR+  K E KT   +  K   E+T+G
Sbjct:   127 WIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIR-KIPSEQTIG 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2141075 NAC071 "NAC domain containing protein 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 79/251 (31%), Positives = 121/251 (48%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GFRFHPTDEE+I     ++ +     +  I  IDLY F+P ELP  S + + +  W+FFC
Sbjct:     9 GFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWFFFC 68

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
                 K +   R +R TK GYWK TG+   I  K    + G +K L F  +  A   + T 
Sbjct:    69 PRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFY-EGRAPLGDRTN 127

Query:   126 WVIHEIA---VED----SPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRK 178
             W +HE     ++D    SP+FK  F +CR+ +K E K     S K K E+ +G   S   
Sbjct:   128 WFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELKK-NSKSLKNKNEQDIGSCYSS-- 184

Query:   179 RDKKLGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAENIVLVPEPQV 238
                 L  S    D++ Q  + K S    DS+   ++    L S++++          PQ+
Sbjct:   185 ----LATSPCR-DEASQIQSFKPSSTTNDSSSIWISPDFILDSSKDY----------PQI 229

Query:   239 RDHSISCYRNH 249
             ++ +  C+ N+
Sbjct:   230 KEVASECFPNY 240

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2176362 NAC089 "NAC domain containing protein 89" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 76/225 (33%), Positives = 113/225 (50%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GF+F PTD E+I     ++ D    SV  I ++++Y+FEP +LP  S ++S+ E W+FFC
Sbjct:    24 GFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSE-WFFFC 82

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
                 K     +  R TK GYWK TG+  ++  K  +EVIGTK+ L F     A +   T+
Sbjct:    83 ARGKKYPHGSQNRRATKMGYWKATGKERDV--KSGSEVIGTKRTLVF-HIGRAPKGERTD 139

Query:   126 WVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKKLGV 185
             W++HE  V+         VVCR+ R +E  +     T +K  K     SS  K  K    
Sbjct:   140 WIMHEYCVK-GVSLDDAMVVCRVRRNKEYNS----GTSQKAPKPN---SSAEKHAKVQNG 191

Query:   186 STSDGDQS-CQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAEN 229
             +TS G  S   NL     ++A +S    +AE  +  S+ N   +N
Sbjct:   192 ATSSGSPSDWDNLVD--FYLAGESGEKLLAEMAE--SSENLQVDN 232

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2039600 NTL8 "NTM1-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 67/204 (32%), Positives = 101/204 (49%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GFRF PTD E+I     ++ D    SV  I E+++Y FEP +LP  S ++SE E W++FC
Sbjct:    17 GFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLPEESKLKSENE-WFYFC 75

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
                 K     +  R T+ GYWK TG+  ++  K   +V+GTK+ L F     A +   TE
Sbjct:    76 ARGRKYPHGSQSRRATQLGYWKATGKERSV--KSGNQVVGTKRTLVF-HIGRAPRGERTE 132

Query:   126 WVIHEIAVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRDKKLGV 185
             W++HE  +  +P  +   VVCRL +  + +     S+ +K E   GVV       ++ G+
Sbjct:   133 WIMHEYCIHGAP--QDALVVCRLRKNADFRA----SSTQKMED--GVVQDDGYVGQRGGL 184

Query:   186 STSDGDQSCQNLTSKRSHVAEDSN 209
                D              +AE SN
Sbjct:   185 EKEDKSYYESEHQIPNGDIAESSN 208

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0009845 "seed germination" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2114678 NAC062 "NAC domain containing protein 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
 Identities = 76/215 (35%), Positives = 110/215 (51%)

Query:     1 MDSL-VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEE 59
             MDSL VG RF PTDEE+I     ++ +     V+ I+EID+  +EP +LP  S I++++ 
Sbjct:    10 MDSLPVGLRFRPTDEELIRYYLRRKINGHDDDVKAIREIDICKWEPWDLPDFSVIKTKDS 69

Query:    60 VWYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAA 119
              W +FC    K     R +R T  GYWK TG+   I +  KT +IG K+ L F     A 
Sbjct:    70 EWLYFCPLDRKYPSGSRQNRATVAGYWKATGKDRKI-KSGKTNIIGVKRTLVFHAG-RAP 127

Query:   120 QKNTTEWVIHEI-AVED-----SPDFKKDFVVCRLERKREKKTLGVVSTKRKREKTLGVV 173
             +   T W+IHE  A ED     +P  +  FV+C+L +K E+  LG   +K   E     V
Sbjct:   128 RGTRTNWIIHEYRATEDDLSGTNPG-QSPFVICKLFKK-EELVLGEEDSKSD-EVEEPAV 184

Query:   174 SSKRKRDKKLGVSTSDGDQSCQNLTSKRSHVAEDS 208
             SS       + V+ S+  +  +    KR  +AE S
Sbjct:   185 SSPT-----VEVTKSEVSEVIKTEDVKRHDIAESS 214

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0070417 "cellular response to cold" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 64/168 (38%), Positives = 87/168 (51%)

Query:     5 VGFRFHPTDEEII-LLLTMKRRDP-TGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWY 62
             VGFRF P DEEI+   L  K  D  T      I  +D+ SFEP +LP  S I+S + VWY
Sbjct:     5 VGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWY 64

Query:    63 FFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKY-KTEVIGTKKFLSFSRDDAAAQK 121
             FF     K +   +  RRT  G+WKKTG+   + RK    E IG K+ L F   D +   
Sbjct:    65 FFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDGSK-- 122

Query:   122 NTTEWVIHEI-AVEDSPDFKKDFVVCRLERKREKKTLGVVSTKRKREK 168
               T+WV+HE  A    P+    + VC++E K E+  +   ST  + E+
Sbjct:   123 --TDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQ 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 60/157 (38%), Positives = 82/157 (52%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSE-EEVWYFF 64
             GFRFHPTDEE++     K+     F +  IKE+DL   EP +L     I S  +  WYFF
Sbjct:    11 GFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEWYFF 70

Query:    65 CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAA-AQKNT 123
                  K     R +R T  G+WK TGR   I   YK   IG +K L F +  A   QK  
Sbjct:    71 SHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKK--IGMRKTLVFYKGRAPHGQK-- 126

Query:   124 TEWVIHEIAVEDSPD--FKKDFVVCRLERKREKKTLG 158
             T+W++HE  +ED+ D   +  +VVCR+ +K+    +G
Sbjct:   127 TDWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVG 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2095730 NAC060 "NAC domain containing protein 60" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 60/149 (40%), Positives = 83/149 (55%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GF+F PTD E+I     ++ D    SV  I E+++Y+FEP +LP  S ++S+ E W+FFC
Sbjct:    17 GFKFSPTDIELISYYLKRKMDGLERSVEIIPEVEIYNFEPWDLPDKSIVKSDSE-WFFFC 75

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
                 K     +  R TK GYWK TG+  N+  K  +EVIGTK+ L F     A +   TE
Sbjct:    76 ARGKKYPHGSQNRRATKIGYWKATGKERNV--KSGSEVIGTKRTLVF-HIGRAPKGGRTE 132

Query:   126 WVIHEIA-VEDSPDFKKDFVVCRLERKRE 153
             W++HE   +  S D     V+CRL R  E
Sbjct:   133 WLMHEYCMIGVSLDA---LVICRLRRNTE 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.7e-21, P = 2.7e-21
 Identities = 72/229 (31%), Positives = 114/229 (49%)

Query:     6 GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
             GFRFHPTDEE+I     ++    GF+ + + ++DL   EP +LP  + +  +E  WYFF 
Sbjct:     8 GFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE--WYFFS 65

Query:    66 EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEV-IGTKKFLSFSRDDAAAQKNTT 124
             +   K     R +R T+ GYWK TG+   I   Y++ V +G KK L F +   A +   +
Sbjct:    66 QRDRKYPTGLRTNRATEAGYWKTTGKDKEI---YRSGVLVGMKKTLVFYKG-RAPKGEKS 121

Query:   125 EWVIHEIAVEDSPDF----KKDFVVCRLERKREKKTLGVVSTKRKREKTLGVVSSKRKRD 180
              WV+HE  +E    F    K+++VVCR+    EK T    + +++ + +     S    +
Sbjct:   122 NWVMHEYRLESKQPFNPTNKEEWVVCRVF---EKSTAAKKAQEQQPQSSQPSFGSPCDAN 178

Query:   181 KKLGVSTSDGDQSCQNLTSKRSHVAEDSNRNHVAEKVDLVSTRNHVAEN 229
               +     D D+   NL S  S +  D N NH+ +     S RN  +E+
Sbjct:   179 SSMANEFEDIDE-LPNLNSNSSTI--DYN-NHIHQ----YSQRNVYSED 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.7e-21, P = 2.7e-21
 Identities = 65/159 (40%), Positives = 84/159 (52%)

Query:     1 MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEV 60
             MD   GFRFHPTDEE+I     K+    GFS + I E+DL   EP ELP  + I  +E  
Sbjct:    15 MDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKE-- 72

Query:    61 WYFFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAA-A 119
             WYFFC    K     R +R T+ GYWK TG+   I R     ++G KK L F R  A   
Sbjct:    73 WYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRG--KSLVGMKKTLVFYRGRAPKG 130

Query:   120 QKNTTEWVIHE------IAVEDSPDF-KKDFVVCRLERK 151
             QK  T WV+HE      ++  + P   K ++V+CR+  K
Sbjct:   131 QK--TNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHK 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	389
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-32

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  118 bits (297), Expect = 2e-32
 Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 6/129 (4%)

Query: 4   LVGFRFHPTDEEIIL-LLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWY 62
             GFRFHPTDEE+++  L  K        +  I E+D+Y FEP +LP     +  +  WY
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREWY 60

Query: 63  FFCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDA-AAQK 121
           FF     K     R +R T  GYWK TG+   +  K   EV+G KK L F +  A   +K
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSK-GGEVVGMKKTLVFYKGRAPKGEK 119

Query: 122 NTTEWVIHE 130
             T+WV+HE
Sbjct: 120 --TDWVMHE 126

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	389
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=9e-42  Score=294.27  Aligned_cols=128  Identities=37%  Similarity=0.611  Sum_probs=95.5

Q ss_pred             CCCCceECCChHHHHHHHHhhhcCCCCCCc-ceeEecCCCCCCCCCCCCCCCCCCCCcEEEEEeccccccCCCCcceeec
Q 016435            3 SLVGFRFHPTDEEIILLLTMKRRDPTGFSV-RTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRRT   81 (389)
Q Consensus         3 LPpGfRF~PTDEELI~~YL~~Ki~G~plp~-~~I~evDVY~~ePweLP~~~~~~g~d~eWYFFs~r~rK~~~G~R~~R~t   81 (389)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+|++..  .+.+++||||+++.+++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhc--cCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999888 69999999999999999422  224789999999999999999999999


Q ss_pred             cCceEEecCCcceeeeCCCceEEEEEEEEeeccccCCCCCCCcCeEEEEEEeC
Q 016435           82 KEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVE  134 (389)
Q Consensus        82 ggG~WKatG~~K~I~~~~gg~vIG~KKtLvFy~gr~p~~g~KT~WvMhEYsL~  134 (389)
                      ++|+||++|+.++|.+. ++.+||+|++|+||.++.+ ++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~-~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSP-NGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTT-S-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccc-cceeeeeEEEEEEEeccCC-CCCcCCeEEEEEEeC
Confidence            99999999999999996 4589999999999988777 889999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	389
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-15
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-15
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-14

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRF+PTDEE+++    ++     FS++ I EIDLY F+P  LP  +    +E  WYFF 
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 77
Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K     R +R    GYWK TG    I+   + + +G KK L F     A +   T 
Sbjct: 78  PRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFY-IGKAPKGTKTN 134
Query: 126 WVIHEIAV-----EDSPDFKKDFVVCRLERKR 152
           W++HE  +      +      D+V+CR+ +K+
Sbjct: 135 WIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRF+PTDEE+++    ++     FS++ I EIDLY F+P  LP  +    +E  WYFF 
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFFS 80
Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K     R +R    GYWK TG    I+   + + +G KK L F     A +   T 
Sbjct: 81  PRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFY-IGKAPKGTKTN 137
Query: 126 WVIHEIAV-----EDSPDFKKDFVVCRLERKR 152
           W++HE  +      +      D+V+CR+ +K+
Sbjct: 138 WIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 169

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 6   GFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFC 65
           GFRFHPTD+E++     ++       V  I E+DLY F+P +LP  +   + E  WYFF 
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--WYFFT 75
Query: 66  EPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTE 125
               K     R +R    GYWK TG    +  + +T  +G KK L F     A +   T+
Sbjct: 76  PRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRT--LGIKKALVFY-AGKAPRGVKTD 132
Query: 126 WVIHEIAVEDSPDFKK----------DFVVCRLERKR 152
           W++HE  + D+               D+V+CRL  K+
Sbjct: 133 WIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	389
1ut7_A	171	No apical meristem protein; transcription regulati	2e-36
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	6e-35

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  129 bits (326), Expect = 2e-36
 Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 5   VGFRFHPTDEEIILL-LTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYF 63
            GFRF+PTDEE+++  L  K      FS++ I EIDLY F+P  LP  +    +E  WYF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAG-YDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYF 75

Query: 64  FCEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDA-AAQKN 122
           F     K     R +R    GYWK TG    I    + + +G KK L F    A    K 
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEGQRVGIKKALVFYIGKAPKGTK- 132

Query: 123 TTEWVIHE-----IAVEDSPDFKKDFVVCRLERKR 152
            T W++HE      +  +      D+V+CR+ +K+
Sbjct: 133 -TNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  125 bits (317), Expect = 6e-35
 Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 17/161 (10%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
            GFRFHPTD+E++     ++       V  I E+DLY F+P +LP  +   + E  WYFF
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--WYFF 74

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAA-AQKNT 123
                K     R +R    GYWK TG    +    +   +G KK L F    A    K  
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPV--APRGRTLGIKKALVFYAGKAPRGVK-- 130

Query: 124 TEWVIHEIAVEDSPDFKK----------DFVVCRLERKREK 154
           T+W++HE  + D+               D+V+CRL  K+ +
Sbjct: 131 TDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	389
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.8e-52  Score=380.90  Aligned_cols=148  Identities=33%  Similarity=0.643  Sum_probs=132.2

Q ss_pred             CCCCCCceECCChHHHHHHHHhhhcCCCCCCcceeEecCCCCCCCCCCCCCCCCCCCCcEEEEEeccccccCCCCcceee
Q 016435            1 MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRR   80 (389)
Q Consensus         1 m~LPpGfRF~PTDEELI~~YL~~Ki~G~plp~~~I~evDVY~~ePweLP~~~~~~g~d~eWYFFs~r~rK~~~G~R~~R~   80 (389)
                      +.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..+  +.+||||+++.+|+++|.|++|+
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g--~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG--AREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC--SSEEEEEEECCC-----CCSCEE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC--CceEEEEeccccccCCCCCceee
Confidence            4799999999999999999999999999999999999999999999999887654  78999999999999999999999


Q ss_pred             ccCceEEecCCcceeeeCCCceEEEEEEEEeeccccCCCCCCCcCeEEEEEEeCCCCC----------CCCCeEEEEEEE
Q 016435           81 TKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPD----------FKKDFVVCRLER  150 (389)
Q Consensus        81 tggG~WKatG~~K~I~~~~gg~vIG~KKtLvFy~gr~p~~g~KT~WvMhEYsL~~~~~----------~~~d~VLCRIyk  150 (389)
                      |++||||++|++++|...  |.+||+||+|+||.+++| ++.||+|+||||+|.....          ..++|||||||+
T Consensus        91 t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~g~~p-~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~  167 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAP-RGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYN  167 (174)
T ss_dssp             ETTEEEEECSCCEEECCS--SSCCEEEEEEEEEESSTT-SCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEE
T ss_pred             cCCceEccCCCCcEEeeC--CcEEEEEEEEEEecCCCC-CCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEE
Confidence            999999999999999876  389999999999999999 9999999999999988642          257999999999


Q ss_pred             eCC
Q 016435          151 KRE  153 (389)
Q Consensus       151 K~~  153 (389)
                      |+.
T Consensus       168 K~~  170 (174)
T 3ulx_A          168 KKN  170 (174)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            875

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=5.7e-52  Score=376.46  Aligned_cols=149  Identities=34%  Similarity=0.623  Sum_probs=129.4

Q ss_pred             CCCCCCceECCChHHHHHHHHhhhcCCCCCCcceeEecCCCCCCCCCCCCCCCCCCCCcEEEEEeccccccCCCCcceee
Q 016435            1 MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRR   80 (389)
Q Consensus         1 m~LPpGfRF~PTDEELI~~YL~~Ki~G~plp~~~I~evDVY~~ePweLP~~~~~~g~d~eWYFFs~r~rK~~~G~R~~R~   80 (389)
                      +.|||||||+|||||||.|||++|+.|.+++.++|+++|||.+|||+||+.+..+  +.+||||+++.+|+++|.|++|+
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g--~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCEE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC--CccEEEEeccccccCCCCccccc
Confidence            4799999999999999999999999999999999999999999999999876554  78999999999999999999999


Q ss_pred             ccCceEEecCCcceeeeCCCceEEEEEEEEeeccccCCCCCCCcCeEEEEEEeCCCCC-----CCCCeEEEEEEEeCCc
Q 016435           81 TKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPD-----FKKDFVVCRLERKREK  154 (389)
Q Consensus        81 tggG~WKatG~~K~I~~~~gg~vIG~KKtLvFy~gr~p~~g~KT~WvMhEYsL~~~~~-----~~~d~VLCRIykK~~~  154 (389)
                      |++||||++|+++.|...+  .+||+||+|+||.++++ ++.||+|+||||+|.....     ..++|||||||+|+..
T Consensus        93 t~~G~Wk~tG~~k~I~~~~--~~vG~KktLvFy~g~~p-~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAP-KGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ETTEEEEEEEEEEEEEETT--EEEEEEEEEEEEESSTT-SCEEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             CCCCEEeccCCCceEEecC--cEEEEEEEEEEEcCcCC-CCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999864  99999999999999999 9999999999999998742     2689999999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	389
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	6e-31

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  113 bits (285), Expect = 6e-31
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 5   VGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFF 64
            GFRF+PTDEE+++    ++     FS++ I EIDLY F+P  LP  +    +E  WYFF
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 65  CEPCYKNSESKRVHRRTKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTT 124
                K     R +R    GYWK TG    I+   + + +G KK L F    A      T
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTK-T 133

Query: 125 EWVIHEIAVEDSPD-----FKKDFVVCRLERKR 152
            W++HE  + +           D+V+CR+ +K+
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	389
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-50  Score=362.07  Aligned_cols=147  Identities=35%  Similarity=0.631  Sum_probs=127.7

Q ss_pred             CCCCCCceECCChHHHHHHHHhhhcCCCCCCcceeEecCCCCCCCCCCCCCCCCCCCCcEEEEEeccccccCCCCcceee
Q 016435            1 MDSLVGFRFHPTDEEIILLLTMKRRDPTGFSVRTIKEIDLYSFEPRELPCHSDIQSEEEVWYFFCEPCYKNSESKRVHRR   80 (389)
Q Consensus         1 m~LPpGfRF~PTDEELI~~YL~~Ki~G~plp~~~I~evDVY~~ePweLP~~~~~~g~d~eWYFFs~r~rK~~~G~R~~R~   80 (389)
                      |+|||||||+|||+|||.|||++|+.|.|++.++|+++|||++|||+||+....+  +++||||+++++++++|.|.+|+
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~--~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG--EKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC--SSEEEEEEECCC-------CCEE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccC--cceEEEEeeeccccCCCCccccc
Confidence            6899999999999999999999999999999999999999999999999765543  78999999999999999999999


Q ss_pred             ccCceEEecCCcceeeeCCCceEEEEEEEEeeccccCCCCCCCcCeEEEEEEeCCCCCC-----CCCeEEEEEEEeC
Q 016435           81 TKEGYWKKTGRGSNINRKYKTEVIGTKKFLSFSRDDAAAQKNTTEWVIHEIAVEDSPDF-----KKDFVVCRLERKR  152 (389)
Q Consensus        81 tggG~WKatG~~K~I~~~~gg~vIG~KKtLvFy~gr~p~~g~KT~WvMhEYsL~~~~~~-----~~d~VLCRIykK~  152 (389)
                      +++|+||++|+.+.|.+.+  .+||+||+|+||.++.+ ++.+|+|+||||+|.+....     .++|||||||+|+
T Consensus        93 ~g~G~Wk~~g~~~~i~~~g--~~vG~kk~l~fy~~~~~-~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          93 AGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAP-KGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ETTEEEEEEEEEEEEEETT--EEEEEEEEEEEEESSTT-SCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cCCCEecccCCCceEecCC--cEEEEEEEEEEEecCCC-CCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            9999999999999998754  89999999999999999 89999999999999886542     5789999999975