Citrus Sinensis ID: 016449

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
cccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHcccccccccccccEEEEEccccccccccccccccccccccEEEEccccccccEEEEEccccccccEEEEcccccccccEEEccEEEEcccEEEccccccccccccccccccccccccccccEEEEEccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEccccccccccc
ccccccccccccccHHHcccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHccccccccccccccccHHEEEEEEEEHHcccccEEEEEEccccccccccEccHHHHcccEEEEEEEcccccEEEEEEEccccccEEEEEEEcccccccEEEEcEEEEcccEEEccccccHHHHHccccHHHHHHHccccccEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccc
mpaqrsksertdagkqlrrdpyevlgvsrnctdQEIKSAYRKMALkyhpdknandpvaADIFKEVTfsynilsdpdkrrqydtagfeaVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMvtvrpllldqHITRKVEKQCAHFYSVTITEEEARAGFvcrvqssdkskfkllyfdregtgglsLALQEDctktgkvtsagmyflgfpvyrldqtatsmaaakdpdaaffkkldgfqpceitelkagtHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHasyttappmkrstsknrsrgspketkeegqvrdkkptmrdrpkkkkwFNIHLkadkrnkc
mpaqrsksertdagkqlrrdpyevlgvsrnctdqEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFsynilsdpdkrRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFvcrvqssdkskFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKraelskfesEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHAsyttappmkrstsknrsrgspketkeegqvrdkkptmrdrpkkkkwfnihlkadkrnkc
MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVesesqeleldlsslGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMaaakdpdaaffkkLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
***********************VLGVSRNCTDQEIKSAYRKMALKYHP***ANDPVAADIFKEVTFSYNILS************************LDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMT**Y******************************************************************************
********************PYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES*****DLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVT*****************CAHFYSVTITEEEARAGFVCRVQSSDKSK*********************************YFLGFPVYRL***************AFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAE**S**AELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYT********************************************NIHLKA******
***************QLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA**********DLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTA*************************************KKKWFNIHLKADKRNKC
****************LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESE*QELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTA*************************************KKKWFNIHLKAD*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQPCEITELKAGTHVFAVYEEKENxxxxxxxxxxxxxxxxxxxxxYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMKRSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query389 2.2.26 [Sep-21-2011]
Q8VXV4436 Chaperone protein dnaJ 16 yes no 1.0 0.892 0.692 1e-173
Q6XL73414 Chaperone protein dnaJ 39 no no 0.984 0.925 0.6 1e-134
Q9ZSY2410 Chaperone protein dnaJ 15 no no 0.948 0.9 0.573 1e-130
Q3AF07381 Chaperone protein DnaJ OS yes no 0.254 0.259 0.427 1e-18
A5WBF8377 Chaperone protein DnaJ OS yes no 0.259 0.267 0.435 2e-17
Q3SIN3372 Chaperone protein DnaJ OS yes no 0.195 0.204 0.552 2e-17
Q8EUM4388 Chaperone protein DnaJ OS yes no 0.190 0.190 0.56 5e-17
Q5FGQ8382 Chaperone protein DnaJ OS yes no 0.251 0.256 0.46 5e-17
Q5HCG4382 Chaperone protein DnaJ OS yes no 0.251 0.256 0.46 5e-17
Q9XCA6383 Chaperone protein DnaJ OS yes no 0.167 0.169 0.630 6e-17
>sp|Q8VXV4|DNJ16_ARATH Chaperone protein dnaJ 16 OS=Arabidopsis thaliana GN=ATJ16 PE=2 SV=1 Back     alignment and function desciption
 Score =  607 bits (1566), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/436 (69%), Positives = 346/436 (79%), Gaps = 47/436 (10%)

Query: 1   MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
           MP  RSKSE+ DA KQLRRDPYEVLGV RN TDQEIKSAYRK+ALKYHPDK ANDPVAAD
Sbjct: 1   MPGHRSKSEKKDADKQLRRDPYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAAD 60

Query: 61  IFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVP 120
           +FKEVTFSYNILSDP+KRRQ+D+AGFEAVE+ESQELELDLSSLGAVNT+FAALFSKLGVP
Sbjct: 61  MFKEVTFSYNILSDPEKRRQFDSAGFEAVEAESQELELDLSSLGAVNTVFAALFSKLGVP 120

Query: 121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
           IKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EEE  AG VCRV+S
Sbjct: 121 IKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEEEVSAGLVCRVES 180

Query: 181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKD 240
           S KSKFKLLYFD+E   GLSLALQED  +TGK+TSAGMYFLGFPVYRLD T  SMA AKD
Sbjct: 181 SSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQAKD 240

Query: 241 PDAAFFKKLDGFQPCEITELKAGTHVFAVY---------------------EEKENLRAV 279
           P+ AFFKKLDGFQ CE+TELKAGTHVFAVY                     +EKE+LR+V
Sbjct: 241 PETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNVSYTIQVLCAAAFTQEKEDLRSV 300

Query: 280 EAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMK 339
           EA+IL+KRAEL+KFE+EYREVL QFT+MTSRYAQEMQ+IDELLKQRNEIH++YTT P MK
Sbjct: 301 EAQILTKRAELAKFETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLMK 360

Query: 340 RSTSKNRSRGSP----------------------KETKEEGQVRDKKPTMRDRP----KK 373
           RS+SKNR R S                       +E +E  + ++KKP+  D+     KK
Sbjct: 361 RSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKKPSTCDKSETLKKK 420

Query: 374 KKWFNIHLKADKRNKC 389
            KWFN+HLK DK+  C
Sbjct: 421 SKWFNLHLKLDKKKPC 436
Have a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to not be involved in gravitropism signaling pathway.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6XL73|DNJ39_ARATH Chaperone protein dnaJ 39 OS=Arabidopsis thaliana GN=ATJ39 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZSY2|DNJ15_ARATH Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1 Back     alignment and function description
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|A5WBF8|DNAJ_PSYWF Chaperone protein DnaJ OS=Psychrobacter sp. (strain PRwf-1) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q3SIN3|DNAJ_THIDA Chaperone protein DnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q8EUM4|DNAJ_MYCPE Chaperone protein DnaJ OS=Mycoplasma penetrans (strain HF-2) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1 Back     alignment and function description
>sp|Q9XCA6|DNAJ_PORGI Chaperone protein DnaJ OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=dnaJ PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query389
296086494408 unnamed protein product [Vitis vinifera] 0.994 0.948 0.8 0.0
147794990408 hypothetical protein VITISV_024054 [Viti 0.994 0.948 0.8 0.0
255558376410 altered response to gravity (arg1), plan 1.0 0.948 0.821 0.0
449452046407 PREDICTED: chaperone protein dnaJ 16-lik 0.992 0.948 0.773 0.0
359473327413 PREDICTED: chaperone protein dnaJ 16 [Vi 0.951 0.895 0.787 0.0
356498024410 PREDICTED: chaperone protein dnaJ 16-lik 0.994 0.943 0.759 0.0
356501218413 PREDICTED: chaperone protein dnaJ 16-lik 0.994 0.937 0.768 1e-180
357486161414 Chaperone protein dnaJ [Medicago truncat 0.997 0.937 0.759 1e-179
224100225408 predicted protein [Populus trichocarpa] 0.994 0.948 0.797 1e-177
297850890436 hypothetical protein ARALYDRAFT_472672 [ 1.0 0.892 0.694 1e-171
>gi|296086494|emb|CBI32083.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/410 (80%), Positives = 359/410 (87%), Gaps = 23/410 (5%)

Query: 1   MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
           MP  RS+SE+TDAGKQLRRDPYEVLGV RN TDQEIKSAYRKMALKYHPDKNANDP AAD
Sbjct: 1   MPGHRSQSEKTDAGKQLRRDPYEVLGVLRNSTDQEIKSAYRKMALKYHPDKNANDPKAAD 60

Query: 61  IFKEVTFSYNILSDPDKRRQYDTAGFEAVESESQELELDLSSLGAVNTMFAALFSKLGVP 120
           +FKEVTFSYNILSDPDKRRQYDTAGFEAVESE QELELDLS+LGAVNTMFAALFSKLGVP
Sbjct: 61  MFKEVTFSYNILSDPDKRRQYDTAGFEAVESEGQELELDLSNLGAVNTMFAALFSKLGVP 120

Query: 121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
           IKTTVSATVLE+ALNG+VTVRPL L Q + +KVEKQCAHFYSVT+TEEEA+ GFVCRVQS
Sbjct: 121 IKTTVSATVLEDALNGVVTVRPLTLGQPVVKKVEKQCAHFYSVTLTEEEAQTGFVCRVQS 180

Query: 181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKD 240
           SDKSKFKLLYFD+E  GGL+L+LQED  +TGKVTSAGMYFLGFPVYRLDQT  SMAAAKD
Sbjct: 181 SDKSKFKLLYFDQEEGGGLNLSLQEDSARTGKVTSAGMYFLGFPVYRLDQTVNSMAAAKD 240

Query: 241 PDAAFFKKLDGFQPCEITELKAGTHVFAVY---------------------EEKENLRAV 279
           PD+AFFK+LDGFQPCE+TELKAGTHVFAVY                     EEKENLRAV
Sbjct: 241 PDSAFFKRLDGFQPCEMTELKAGTHVFAVYGDNFFKSVSYTIEALCTAPFAEEKENLRAV 300

Query: 280 EAEILSKRAELSKFESEYREVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASYTTAPPMK 339
           EA+IL+KR ELSKFE+EYREVL QFTEMTSRYAQEMQAID+LLKQRNEIHASY++APP+K
Sbjct: 301 EAQILTKRVELSKFETEYREVLTQFTEMTSRYAQEMQAIDDLLKQRNEIHASYSSAPPIK 360

Query: 340 RSTSKNRSRGSPKETKEEGQVRDKKPTMRDRPKKKKWFNIHLKADKRNKC 389
           RS SKN  RG  K++K++GQV+DKKP  R+RPKKKKW+NIHLK DK   C
Sbjct: 361 RSRSKN--RGLSKDSKDDGQVKDKKPAFRERPKKKKWYNIHLKVDKSKPC 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147794990|emb|CAN74067.1| hypothetical protein VITISV_024054 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255558376|ref|XP_002520215.1| altered response to gravity (arg1), plant, putative [Ricinus communis] gi|223540707|gb|EEF42270.1| altered response to gravity (arg1), plant, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449452046|ref|XP_004143771.1| PREDICTED: chaperone protein dnaJ 16-like [Cucumis sativus] gi|449486531|ref|XP_004157324.1| PREDICTED: chaperone protein dnaJ 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359473327|ref|XP_002269863.2| PREDICTED: chaperone protein dnaJ 16 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356498024|ref|XP_003517855.1| PREDICTED: chaperone protein dnaJ 16-like [Glycine max] Back     alignment and taxonomy information
>gi|356501218|ref|XP_003519423.1| PREDICTED: chaperone protein dnaJ 16-like [Glycine max] Back     alignment and taxonomy information
>gi|357486161|ref|XP_003613368.1| Chaperone protein dnaJ [Medicago truncatula] gi|355514703|gb|AES96326.1| Chaperone protein dnaJ [Medicago truncatula] Back     alignment and taxonomy information
>gi|224100225|ref|XP_002311794.1| predicted protein [Populus trichocarpa] gi|222851614|gb|EEE89161.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297850890|ref|XP_002893326.1| hypothetical protein ARALYDRAFT_472672 [Arabidopsis lyrata subsp. lyrata] gi|297339168|gb|EFH69585.1| hypothetical protein ARALYDRAFT_472672 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query389
TAIR|locus:2032437436 ARL1 "ARG1-like 1" [Arabidopsi 0.848 0.756 0.628 1.1e-103
TAIR|locus:2202725414 ARL2 "ARG1-like 2" [Arabidopsi 0.850 0.799 0.535 1.3e-84
TAIR|locus:2202334410 ARG1 "ALTERED RESPONSE TO GRAV 0.804 0.763 0.545 1.2e-83
WB|WBGene00001034395 dnj-16 [Caenorhabditis elegans 0.647 0.637 0.397 3.6e-42
TIGR_CMR|CHY_0416381 CHY_0416 "chaperone protein dn 0.254 0.259 0.470 1.1e-18
TIGR_CMR|DET_1398356 DET_1398 "co-chaperone protein 0.246 0.269 0.422 9.5e-17
TIGR_CMR|GSU_0034373 GSU_0034 "chaperone protein dn 0.185 0.193 0.569 2.9e-16
UNIPROTKB|J9P8A9269 DNAJB11 "DnaJ homolog subfamil 0.215 0.312 0.452 5.9e-16
WB|WBGene00001032217 dnj-14 [Caenorhabditis elegans 0.164 0.294 0.553 7.7e-16
ZFIN|ZDB-GENE-081021-2199 dnajc5ab "DnaJ (Hsp40) homolog 0.197 0.386 0.512 1.7e-15
TAIR|locus:2032437 ARL1 "ARG1-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
 Identities = 210/334 (62%), Positives = 247/334 (73%)

Query:     1 MPAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAAD 60
             MP  RSKSE+ DA KQLRRDPYEVLGV RN TDQEIKSAYRK+ALKYHPDK ANDPVAAD
Sbjct:     1 MPGHRSKSEKKDADKQLRRDPYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAAD 60

Query:    61 IFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLGVP 120
             +FKEVTFSYNILSDP+KRRQ+D+AGFEAV              GAVNT+FAALFSKLGVP
Sbjct:    61 MFKEVTFSYNILSDPEKRRQFDSAGFEAVEAESQELELDLSSLGAVNTVFAALFSKLGVP 120

Query:   121 IKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAGFVCRVQS 180
             IKT+VSAT+LEEALNG V+V PL+L Q +++KVEKQCAHFY+VTI+EEE  AG VCRV+S
Sbjct:   121 IKTSVSATILEEALNGRVSVDPLVLGQAVSKKVEKQCAHFYAVTISEEEVSAGLVCRVES 180

Query:   181 SDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMXXXXX 240
             S KSKFKLLYFD+E   GLSLALQED  +TGK+TSAGMYFLGFPVYRLD T  SM     
Sbjct:   181 SSKSKFKLLYFDQEANSGLSLALQEDSKRTGKITSAGMYFLGFPVYRLDHTINSMAQAKD 240

Query:   241 XXXXXXXXLDGFQPCEITELKAGTHVFAVYEEK--ENLRAVEAEILSKRAELSKFESEYR 298
                     LDGFQ CE+TELKAGTHVFAVY +   +N+ +   ++L   A  ++ + + R
Sbjct:   241 PETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFFKNV-SYTIQVLCAAA-FTQEKEDLR 298

Query:   299 EVLAQFTEMTSRYAQEMQAIDELLKQRNEIHASY 332
              V AQ     +  A+      E+L Q  ++ + Y
Sbjct:   299 SVEAQILTKRAELAKFETEYREVLVQFTDMTSRY 332
GO:0005634 "nucleus" evidence=ISM
GO:0006457 "protein folding" evidence=IEA;ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
TAIR|locus:2202725 ARL2 "ARG1-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202334 ARG1 "ALTERED RESPONSE TO GRAVITY 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00001034 dnj-16 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1398 DET_1398 "co-chaperone protein DnaJ" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|J9P8A9 DNAJB11 "DnaJ homolog subfamily B member 11" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00001032 dnj-14 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081021-2 dnajc5ab "DnaJ (Hsp40) homolog, subfamily C, member 5ab" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VXV4DNJ16_ARATHNo assigned EC number0.69261.00.8922yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query389
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 3e-29
pfam0022663 pfam00226, DnaJ, DnaJ domain 6e-29
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 2e-28
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 3e-26
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 5e-23
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 6e-23
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 6e-22
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 7e-22
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 7e-22
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 1e-21
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 1e-21
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 1e-21
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 2e-21
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 2e-21
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 1e-20
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 4e-20
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 7e-20
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 7e-20
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 7e-20
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 2e-19
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 2e-19
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 4e-19
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 5e-19
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 1e-18
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 2e-18
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 2e-18
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 3e-18
PRK14296372 PRK14296, PRK14296, chaperone protein DnaJ; Provis 3e-18
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 4e-18
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 6e-17
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 5e-16
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 6e-16
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 1e-14
PRK14288369 PRK14288, PRK14288, chaperone protein DnaJ; Provis 7e-12
PRK14300372 PRK14300, PRK14300, chaperone protein DnaJ; Provis 4e-11
COG5407 610 COG5407, SEC63, Preprotein translocase subunit Sec 6e-10
PRK10266306 PRK10266, PRK10266, curved DNA-binding protein Cbp 7e-10
PRK09430267 PRK09430, djlA, Dna-J like membrane chaperone prot 1e-07
COG5269379 COG5269, ZUO1, Ribosome-associated chaperone zuoti 6e-06
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 1e-05
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information 
 Score =  116 bits (293), Expect = 3e-29
 Identities = 42/72 (58%), Positives = 51/72 (70%)

Query: 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKR 78
          RD YEVLGVSRN ++ EIK AYRK+A+KYHPD+N  D  A + FKE+  +Y +LSDP KR
Sbjct: 4  RDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKR 63

Query: 79 RQYDTAGFEAVE 90
            YD  G  A E
Sbjct: 64 AAYDQYGHAAFE 75

Length = 371
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 389
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.97
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 99.94
PRK14296372 chaperone protein DnaJ; Provisional 99.93
PRK14288369 chaperone protein DnaJ; Provisional 99.93
PRK14276380 chaperone protein DnaJ; Provisional 99.92
PRK14287371 chaperone protein DnaJ; Provisional 99.92
PTZ00037421 DnaJ_C chaperone protein; Provisional 99.92
PRK14297380 chaperone protein DnaJ; Provisional 99.92
PRK14285365 chaperone protein DnaJ; Provisional 99.92
PRK14286372 chaperone protein DnaJ; Provisional 99.92
PRK14298377 chaperone protein DnaJ; Provisional 99.92
PRK14277386 chaperone protein DnaJ; Provisional 99.91
PRK14282369 chaperone protein DnaJ; Provisional 99.91
PRK14278378 chaperone protein DnaJ; Provisional 99.91
PRK14280376 chaperone protein DnaJ; Provisional 99.91
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.91
PRK14294366 chaperone protein DnaJ; Provisional 99.91
PRK14301373 chaperone protein DnaJ; Provisional 99.9
PRK14279392 chaperone protein DnaJ; Provisional 99.9
PRK10767371 chaperone protein DnaJ; Provisional 99.9
PRK14281397 chaperone protein DnaJ; Provisional 99.9
PRK14290365 chaperone protein DnaJ; Provisional 99.89
PRK14284391 chaperone protein DnaJ; Provisional 99.89
PRK14295389 chaperone protein DnaJ; Provisional 99.89
PRK14283378 chaperone protein DnaJ; Provisional 99.89
PRK14291382 chaperone protein DnaJ; Provisional 99.89
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 99.88
PRK14293374 chaperone protein DnaJ; Provisional 99.87
PRK14289386 chaperone protein DnaJ; Provisional 99.87
PRK14299291 chaperone protein DnaJ; Provisional 99.86
PRK14292371 chaperone protein DnaJ; Provisional 99.86
PRK14300372 chaperone protein DnaJ; Provisional 99.86
PRK10266306 curved DNA-binding protein CbpA; Provisional 99.8
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.74
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 99.73
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 99.72
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 99.72
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.68
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.68
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.66
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.59
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 99.58
PHA03102153 Small T antigen; Reviewed 99.58
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.57
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.55
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.55
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.48
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 99.39
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 99.36
PRK05014171 hscB co-chaperone HscB; Provisional 99.36
PRK01356166 hscB co-chaperone HscB; Provisional 99.32
PRK03578176 hscB co-chaperone HscB; Provisional 99.31
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 99.3
PRK00294173 hscB co-chaperone HscB; Provisional 99.28
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 99.27
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 99.1
PHA02624 647 large T antigen; Provisional 99.09
PTZ00100116 DnaJ chaperone protein; Provisional 99.07
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 98.83
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.8
PRK01773173 hscB co-chaperone HscB; Provisional 98.76
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.75
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 98.71
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 97.95
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 97.78
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 97.06
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 95.25
KOG0431453 consensus Auxilin-like protein and related protein 94.77
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 94.66
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 93.18
PF03656127 Pam16: Pam16; InterPro: IPR005341 The Pam16 protei 83.09
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-49  Score=389.45  Aligned_cols=295  Identities=34%  Similarity=0.447  Sum_probs=253.5

Q ss_pred             ccCCCCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCccccccch
Q 016449           14 GKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVESES   93 (389)
Q Consensus        14 ~~~~~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~l~~~~   93 (389)
                      ....++|||+||||+++||..|||+|||||||+|||||||+||.|.+.|++|+.||+|||||++|+.||.+|++++...+
T Consensus        11 ~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~   90 (336)
T KOG0713|consen   11 AVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN   90 (336)
T ss_pred             hhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999887544


Q ss_pred             hhhhccccccccHHHHHHHhhccCCCCceeeechhhHHHHHCCceeeecccccccccccccccccceeeeEEeheeccCC
Q 016449           94 QELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTVRPLLLDQHITRKVEKQCAHFYSVTITEEEARAG  173 (389)
Q Consensus        94 ~~~~~d~~s~g~~~~iF~~~Fg~~g~~i~t~vs~~~LEea~~G~~~~~~l~~g~~~c~k~e~~~a~fy~v~it~eq~~~G  173 (389)
                      .....+.++    +++|+.||+.+|+.    +....+++         +++.|..+...++++|+|+|.+.++.+....|
T Consensus        91 ~~~~~g~~~----~~~f~~~f~dfg~~----~~g~~~~e---------~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~  153 (336)
T KOG0713|consen   91 KDGEGGGGG----NDIFSAFFGDFGVT----VGGNPLEE---------ALPKGSDVSSDLEKQLEHFYMGNFVEEVREKG  153 (336)
T ss_pred             cccccCCcc----cchHHHhhcccccc----cCCCcccC---------CCCCCceEEeehhhchhhhhcccHHHHHhccC
Confidence            222222111    68999999999873    33333333         25677777788999999999999999999999


Q ss_pred             cEEEEecCCCCceeeeeeeccCCCccceeeeecccccCccccccccccCCcccccccccchhhhcCCcchHhhhhccCCc
Q 016449          174 FVCRVQSSDKSKFKLLYFDREGTGGLSLALQEDCTKTGKVTSAGMYFLGFPVYRLDQTATSMAAAKDPDAAFFKKLDGFQ  253 (389)
Q Consensus       174 ~v~~vqs~~~sKfkl~~Fe~~~~gg~~~~~qeds~~~~k~t~a~~~f~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~f~  253 (389)
                      ++..+.++...+|++++|++..++|+-..+|+..-.++++                   ..+....++.+.+|+.++.++
T Consensus       154 v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~-------------------~k~~~e~~~~~~~~~~~~~~~  214 (336)
T KOG0713|consen  154 VYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPN-------------------VKLVLEEDPLEVEFERGDADG  214 (336)
T ss_pred             ceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCc-------------------cceeecCCceeeeeeecccCC
Confidence            9999999999999999999999988777788644443332                   222335677888999999999


Q ss_pred             ccceeeccCCceEEEEe---------------------cchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 016449          254 PCEITELKAGTHVFAVY---------------------EEKENLRAVEAEILSKRAELSKFESEYREVLAQFTEMTSRYA  312 (389)
Q Consensus       254 ~~~~~~l~~g~h~~~vy---------------------~~~~~~~~~e~~~~~k~~el~~f~~ey~~~~~~~~~~~~~~~  312 (389)
                      ++..+.++.+.|+||||                     .+.+.+.++|++|+.++.||..|+.||++|++++.++..++.
T Consensus       215 ~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~  294 (336)
T KOG0713|consen  215 PEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGART  294 (336)
T ss_pred             ceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhh
Confidence            99999999999999999                     345889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 016449          313 QEMQAIDELLKQRNEIHASYTTAPPMKRSTSK  344 (389)
Q Consensus       313 ~~~~~~~~ll~~r~~~~~~~~~~~~~~~~~~~  344 (389)
                      .+.+++..+|+.|+.++..|++.++....++.
T Consensus       295 ~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~  326 (336)
T KOG0713|consen  295 RKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSL  326 (336)
T ss_pred             hhhhccchhhhccchhcceeEEecccCccccc
Confidence            99999999999999999999999887754333

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query389
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 1e-15
2ctw_A109 Solution Structure Of J-Domain From Mouse Dnaj Subf 1e-14
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 2e-14
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 1e-13
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 2e-13
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 2e-13
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 2e-13
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 4e-13
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 4e-13
2o37_A92 J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S 1e-12
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 5e-12
2cug_A88 Solution Structure Of The J Domain Of The Pseudo Dn 7e-12
3apo_A 780 Crystal Structure Of Full-Length Erdj5 Length = 780 2e-11
3apq_A210 Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt 3e-11
2dmx_A92 Solution Structure Of The J Domain Of Dnaj Homolog 4e-11
2ej7_A82 Solution Structure Of The Dnaj Domain Of The Human 1e-10
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 3e-10
2y4u_A450 Crystal Structure Of Human P58(Ipk) In Space Group 3e-09
2y4t_A450 Crystal Structure Of The Human Co-Chaperone P58(Ipk 3e-09
2kqx_A73 Nmr Structure Of The J-Domain (Residues 2-72) In Th 4e-07
2yua_A99 Solution Structure Of The Dnaj Domain From Human Wi 9e-07
3lz8_A329 Structure Of A Putative Chaperone Dnaj From Klebsie 7e-06
2l6l_A155 Solution Structure Of Human J-Protein Co-Chaperone, 2e-05
1wjz_A94 Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P 1e-04
2ys8_A90 Solution Structure Of The Dnaj-Like Domain From Hum 4e-04
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure 
Iteration: 1

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 20 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRR 79
          D YE+LGVSR  +D+++K AYR++ALK+HPDKN + P A + FK +  +Y +LS+P+KR+
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRK 66
Query: 80 QYDTAG 85
          QYD  G
Sbjct: 67 QYDQFG 72
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 Back     alignment and structure
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 Back     alignment and structure
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 Back     alignment and structure
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 Back     alignment and structure
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450 Back     alignment and structure
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450 Back     alignment and structure
>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73 Back     alignment and structure
>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99 Back     alignment and structure
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329 Back     alignment and structure
>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155 Back     alignment and structure
>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94 Back     alignment and structure
>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query389
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 3e-32
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 6e-32
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 6e-32
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 1e-31
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 5e-31
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 2e-30
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 4e-30
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 6e-30
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 6e-30
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 2e-29
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 2e-29
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 4e-29
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 6e-29
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 9e-29
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 2e-28
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 4e-28
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 7e-28
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 3e-27
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 9e-25
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 6e-24
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 1e-23
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 4e-23
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 2e-22
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 3e-21
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 1e-16
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 3e-13
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 2e-12
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 3e-12
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 6e-12
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 4e-11
2guz_A71 Mitochondrial import inner membrane translocase su 5e-10
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 3e-09
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 7e-09
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 1e-07
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
 Score =  116 bits (292), Expect = 3e-32
 Identities = 33/72 (45%), Positives = 48/72 (66%)

Query: 19 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKR 78
          +D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR
Sbjct: 3  QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 79 RQYDTAGFEAVE 90
            YD  G  A E
Sbjct: 63 AAYDQYGHAAFE 74
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query389
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.85
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.82
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.82
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.81
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 99.8
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.79
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.79
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.79
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.78
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.78
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.78
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.77
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.77
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.76
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.76
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.76
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.75
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.71
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.68
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.68
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.64
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.63
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.62
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.61
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.61
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.61
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.59
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.59
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.59
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.58
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.54
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 99.53
2guz_A71 Mitochondrial import inner membrane translocase su 99.48
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 99.02
2guz_B65 Mitochondrial import inner membrane translocase su 98.4
2pzi_A681 Probable serine/threonine-protein kinase PKNG; ATP 86.76
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 82.93
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
Probab=99.85  E-value=4.7e-22  Score=165.42  Aligned_cols=74  Identities=45%  Similarity=0.829  Sum_probs=70.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCcccccc
Q 016449           18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVES   91 (389)
Q Consensus        18 ~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~l~~   91 (389)
                      ..|||+||||+++|+.++||+|||+|+++||||++++++++.++|+.|++||+||+||.+|..||..|..++..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   75 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ   75 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence            57999999999999999999999999999999999977889999999999999999999999999999887654
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 389
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 5e-19
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 1e-18
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 2e-17
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 3e-16
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 4e-15
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 7e-14
d1iura_88 a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human 6e-12
d1gh6a_114 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 1e-11
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 78.5 bits (193), Expect = 5e-19
 Identities = 33/73 (45%), Positives = 49/73 (67%)

Query: 18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDK 77
          ++D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  K
Sbjct: 2  KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61

Query: 78 RRQYDTAGFEAVE 90
          R  YD  G  A E
Sbjct: 62 RAAYDQYGHAAFE 74
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query389
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.87
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.84
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.79
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.76
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.62
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.61
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.58
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.57
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1.7e-23  Score=163.76  Aligned_cols=72  Identities=44%  Similarity=0.835  Sum_probs=68.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCchhhhhHhhHhhhhhccCCccccccccccCcccc
Q 016449           18 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV   89 (389)
Q Consensus        18 ~~d~YeiLGV~~~As~~EIKkAYrklalk~HPDKn~~~~~a~~~F~~I~~AYevLsDp~kR~~YD~~G~~~l   89 (389)
                      ++|||+||||+++||.+|||+|||+++++||||++++++.+..+|+.|++||+||+||.+|..||.+|..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            689999999999999999999999999999999999888899999999999999999999999999997654
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure