Citrus Sinensis ID: 016531
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 388 | ||||||
| 449527442 | 507 | PREDICTED: protein ECERIFERUM 1-like, pa | 0.786 | 0.601 | 0.590 | 1e-104 | |
| 449432335 | 624 | PREDICTED: protein ECERIFERUM 1-like [Cu | 0.786 | 0.488 | 0.590 | 1e-104 | |
| 359489254 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.773 | 0.484 | 0.598 | 1e-103 | |
| 359489248 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.773 | 0.484 | 0.601 | 1e-102 | |
| 297734710 | 631 | unnamed protein product [Vitis vinifera] | 0.773 | 0.475 | 0.598 | 1e-102 | |
| 359489252 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.773 | 0.484 | 0.598 | 1e-102 | |
| 297734709 | 2763 | unnamed protein product [Vitis vinifera] | 0.773 | 0.108 | 0.595 | 1e-101 | |
| 359489250 | 619 | PREDICTED: protein WAX2-like [Vitis vini | 0.773 | 0.484 | 0.595 | 1e-100 | |
| 225454040 | 620 | PREDICTED: protein WAX2 [Vitis vinifera] | 0.762 | 0.477 | 0.573 | 3e-99 | |
| 356504499 | 624 | PREDICTED: protein WAX2-like [Glycine ma | 0.773 | 0.480 | 0.565 | 4e-99 |
| >gi|449527442|ref|XP_004170720.1| PREDICTED: protein ECERIFERUM 1-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/342 (59%), Positives = 245/342 (71%), Gaps = 37/342 (10%)
Query: 49 SKLTEREIGGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSRSHHHSS--I 106
S LT + G P+WR DGV++ LLHAGPVEF+YYWLHRALHHHYLYSR H H I
Sbjct: 110 SNLTAK---GRNLPLWRTDGVVITFLLHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSI 166
Query: 107 VPEPITSVTRPFAEHITYFVLFATPLITTALTGAGSIVPAFGYITYIDLMNNMGHCNFGL 166
V EPITSV PFAEH+TYF+LFA P++T TG S+ Y+TYID MNNMGHCNF +
Sbjct: 167 VTEPITSVIHPFAEHLTYFLLFAIPMLTVLFTGISSLAVYIFYLTYIDFMNNMGHCNFEI 226
Query: 167 IPKWLFTIFPPLKYLMYTPS-------PLTASYAAPGELLD----------DSL------ 203
IP LFT+FPPLKY +YTPS +Y+ L D DSL
Sbjct: 227 IPNRLFTLFPPLKYFLYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTLDNSSDSLYEKSLK 286
Query: 204 ------DVVYLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWI 257
DVV+LTHLTTPESIYH+RLG A LAS+PH +S WY WLL P+T+ SM++TWI
Sbjct: 287 REEEVADVVHLTHLTTPESIYHLRLGFADLASRPH---TSTWYTWLLSPITMGSMLLTWI 343
Query: 258 YGRTFVVERNRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLG 317
YGRTFVVERN+ KLK+QTWA K+N+QYF Q ++IN +IE+AI+EA++KG +V SLG
Sbjct: 344 YGRTFVVERNQFEKLKMQTWAIPKFNVQYFLQWQKQAINSMIEDAIVEADQKGCKVFSLG 403
Query: 318 LLNQGEELNRYGGLFVHKNPELKIKVVDGSSLAVAVLTNSIP 359
LLNQGEELN YGGL+V +NP+L+++VVDGSSLAVAV+ NSIP
Sbjct: 404 LLNQGEELNIYGGLYVQRNPKLRVRVVDGSSLAVAVVLNSIP 445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432335|ref|XP_004133955.1| PREDICTED: protein ECERIFERUM 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|359489254|ref|XP_002265189.2| PREDICTED: protein WAX2-like [Vitis vinifera] gi|297734711|emb|CBI16762.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489248|ref|XP_002265685.2| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297734710|emb|CBI16761.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489252|ref|XP_002263787.2| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297734709|emb|CBI16760.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489250|ref|XP_003633900.1| PREDICTED: protein WAX2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225454040|ref|XP_002262647.1| PREDICTED: protein WAX2 [Vitis vinifera] gi|297744851|emb|CBI38119.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356504499|ref|XP_003521033.1| PREDICTED: protein WAX2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 388 | ||||||
| UNIPROTKB|Q109K1 | 595 | LOC_Os10g33250 "CER1 protein, | 0.762 | 0.497 | 0.350 | 2.7e-45 | |
| TAIR|locus:2204813 | 627 | AT1G02190 "AT1G02190" [Arabido | 0.335 | 0.207 | 0.621 | 1e-39 | |
| UNIPROTKB|Q7XDI3 | 621 | Os10g0471100 "CER1 protein, pu | 0.335 | 0.209 | 0.598 | 2.3e-38 | |
| TAIR|locus:2040666 | 613 | AT2G37700 "AT2G37700" [Arabido | 0.337 | 0.213 | 0.582 | 2.2e-37 | |
| UNIPROTKB|Q6ETL8 | 628 | P0544B02.10 "Os02g0178800 prot | 0.479 | 0.296 | 0.306 | 7.7e-31 | |
| TAIR|locus:2174368 | 632 | CER3 "ECERIFERUM 3" [Arabidops | 0.615 | 0.378 | 0.274 | 1.4e-15 |
| UNIPROTKB|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 110/314 (35%), Positives = 162/314 (51%)
Query: 57 GGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRAXXXXXXXXXXXXXXXI--VPEPITSV 114
GG P+WR DG L+ALLHAGPVEF+YYW H I + +T
Sbjct: 115 GGQHLPLWRTDGAGLIALLHAGPVEFLYYWFHPVIHPFAELVAYELLFSIPLIACALTGT 174
Query: 115 TRPFA-EHITYFVLFATPL--ITTALTGAGSIV--PAFGYITYIDLMNNMGHCNFGLIPK 169
A E ++ F + L + P Y+ Y +++ H F +
Sbjct: 175 ASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQF----R 230
Query: 170 WLFTIFPPLKYLMYTPSPLTASYAAPGELL----DDSLDVVYLTHLTTPESIYHMRLGLA 225
+++F P +Y ++ L ++++DVV+LTHLTT SIYHMR G A
Sbjct: 231 TNYSLFMPFYDYIYNTMDKSSDTLYENSLKNNEEEEAVDVVHLTHLTTLHSIYHMRPGFA 290
Query: 226 SLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTFVVERNRLNKLKLQTWAKSKYNMQ 285
AS+P+ S WY ++WP++ SM++TW YG +F VERN + K+++Q+WA +Y+
Sbjct: 291 EFASRPYV---SRWYMRMMWPLSWLSMVLTWTYGSSFTVERNVMKKIRMQSWAIPRYSFH 347
Query: 286 YFSQQPNESINRXXXXXXXXXXXKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKVVD 345
Y E+IN GA+V+SLGLLNQ LN+ G ++ K P+L ++VD
Sbjct: 348 YGLDWEKEAINDLIEKAVCEADKNGAKVVSLGLLNQAHTLNKSGEQYLLKYPKLGARIVD 407
Query: 346 GSSLAVAVLTNSIP 359
G+SLA AV+ NSIP
Sbjct: 408 GTSLAAAVVVNSIP 421
|
|
| TAIR|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00010554001 | SubName- Full=Chromosome undetermined scaffold_268, whole genome shotgun sequence; (618 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 388 | |||
| PLN02869 | 620 | PLN02869, PLN02869, fatty aldehyde decarbonylase | 1e-167 | |
| pfam04116 | 114 | pfam04116, FA_hydroxylase, Fatty acid hydroxylase | 4e-11 | |
| COG3000 | 271 | COG3000, ERG3, Sterol desaturase [Lipid metabolism | 9e-08 |
| >gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase | Back alignment and domain information |
|---|
Score = 482 bits (1241), Expect = e-167
Identities = 215/334 (64%), Positives = 249/334 (74%), Gaps = 34/334 (10%)
Query: 57 GGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSR--SHHHSSIVPEPITSV 114
G + P+WR DGV++ LLH GPVEF+YYWLHRALHHHYLYSR SHHHSSIV EPITSV
Sbjct: 115 GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSV 174
Query: 115 TRPFAEHITYFVLFATPLITTALTGAGSIVPAFGYITYIDLMNNMGHCNFGLIPKWLFTI 174
PFAEHI YF+LFA PL+TT TG SI FGYI+YID MNNMGHCNF LIPKWLF+I
Sbjct: 175 IHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSI 234
Query: 175 FPPLKYLMYTPS-----------------PL------------TASYAAPGELLDDSLDV 205
FPPLKYLMYTPS P+ Y + ++ DV
Sbjct: 235 FPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPEEIPDV 294
Query: 206 VYLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTFVVE 265
V+LTHLTTP+SIYH+RLG ASLASKP+ S+WY L+WPVT +SMM+TWIYGRTFV+E
Sbjct: 295 VHLTHLTTPDSIYHLRLGFASLASKPY---ISKWYLRLMWPVTSWSMMLTWIYGRTFVLE 351
Query: 266 RNRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLGLLNQGEEL 325
RNR NKL LQTW KY +QY + NESIN LIEEAILEA+++G +V+SLGLLNQGEEL
Sbjct: 352 RNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEEL 411
Query: 326 NRYGGLFVHKNPELKIKVVDGSSLAVAVLTNSIP 359
NRYG L++H+NP+LKIKVVDGSSLAVAV+ NSIP
Sbjct: 412 NRYGELYIHRNPKLKIKVVDGSSLAVAVVLNSIP 445
|
Length = 620 |
| >gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 388 | |||
| PLN02869 | 620 | fatty aldehyde decarbonylase | 100.0 | |
| COG3000 | 271 | ERG3 Sterol desaturase [Lipid metabolism] | 99.79 | |
| KOG0873 | 283 | consensus C-4 sterol methyl oxidase [Lipid transpo | 99.64 | |
| PF04116 | 114 | FA_hydroxylase: Fatty acid hydroxylase superfamily | 99.54 | |
| KOG0872 | 312 | consensus Sterol C5 desaturase [Lipid transport an | 99.41 | |
| KOG0874 | 287 | consensus Sphingolipid hydroxylase [Lipid transpor | 99.02 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 96.93 | |
| PLN02434 | 237 | fatty acid hydroxylase | 90.7 |
| >PLN02869 fatty aldehyde decarbonylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-105 Score=828.68 Aligned_cols=317 Identities=68% Similarity=1.153 Sum_probs=297.3
Q ss_pred CCCCCchhhHHHHHHHHHHHhcchhhHHHHHHhhcChhhcccc--CCCcCCCCCCceecccCCchHHHHHHHHHHHHHHH
Q 016531 57 GGTQFPIWRLDGVILMALLHAGPVEFVYYWLHRALHHHYLYSR--SHHHSSIVPEPITSVTRPFAEHITYFVLFATPLIT 134 (388)
Q Consensus 57 ~~~~lP~W~~~~~il~~LLh~l~vDf~yYW~HRllH~p~Lwr~--svHHSs~~p~p~Ta~r~HplE~ll~~~lf~IPLl~ 134 (388)
+++++|.|+++++++.+++|++++||+|||.||++|++++|++ ++||++++|+|+|+.++++.|++.+.+++++|+++
T Consensus 115 ~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLll 194 (620)
T PLN02869 115 GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLT 194 (620)
T ss_pred hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999666655 99999999999999864556888888888899988
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhccccceeccCcccccCCCceEEeCCChhcc-------cC----------------
Q 016531 135 TALTGAGSIVPAFGYITYIDLMNNMGHCNFGLIPKWLFTIFPPLKYLMYTPSPLT-------AS---------------- 191 (388)
Q Consensus 135 ~~l~g~~s~~~l~~yll~~~~~~~~gHsN~el~P~~lf~~lp~LkyLi~TPs~Hr-------tN---------------- 191 (388)
..+++..|+.++++|+++.+++++++|||+|++|+++++.+|+++|+++||+||+ +|
T Consensus 195 li~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d 274 (620)
T PLN02869 195 TIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMD 274 (620)
T ss_pred HhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhHHhccCCcCcccchHHHHhccCCCC
Confidence 7777777888999999999999999999999999999888899999999999999 66
Q ss_pred ------cCCCCCCCCCCCCeEEeeccCCccccchhhhhhhhhcCCCCCcCCcchhhhhhhHHHHHHHHHHHHhcceeEEe
Q 016531 192 ------YAAPGELLDDSLDVVYLTHLTTPESIYHMRLGLASLASKPHQHASSEWYKWLLWPVTLFSMMITWIYGRTFVVE 265 (388)
Q Consensus 192 ------y~~~~~~~~e~~D~VfltH~~~~~s~~h~~~g~~s~~s~p~~~~~~~~~l~~~wp~~~~~~~~~w~~~~~f~~~ 265 (388)
|++++++.+++||+|||||++|++|+||+|+|+||+||.|| +++||||||||+|+++|+++|+|||||++|
T Consensus 275 ~~s~~l~e~~~~~~~~~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~---~~~~~l~~~wp~~~~~m~~~w~~~~~f~~~ 351 (620)
T PLN02869 275 KSSDTLYEKSLKRPEEIPDVVHLTHLTTPDSIYHLRLGFASLASKPY---ISKWYLRLMWPVTSWSMMLTWIYGRTFVLE 351 (620)
T ss_pred CCchhHHHHhhcCcccCCCEEEEeccCCHHHhhccchHHHHhccCCc---cchhHHHHHHHHHHHHHHHHHHhCCceEee
Confidence 45555555668999999999999999999999999999999 999999999999999999999999999999
Q ss_pred ecccCcceeeeEEEeccCccccccCCchhHHHHHHHHHHHHHHcCCeEEEeeccccccccccccceeeeccCCCceEeec
Q 016531 266 RNRLNKLKLQTWAKSKYNMQYFSQQPNESINRLIEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKVVD 345 (388)
Q Consensus 266 ~~~~~~~~~qtw~ipr~~~qy~~~~~~~~in~~ie~ail~ad~~gvkv~sLg~lNk~~~ln~~g~l~v~k~p~l~vrvv~ 345 (388)
+|+|||+++|||+||||||||++|+++|+||++|||||+||||+||||+|||+|||||+|||||||||+|||+|||||||
T Consensus 352 ~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~L~vrvv~ 431 (620)
T PLN02869 352 RNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNPKLKIKVVD 431 (620)
T ss_pred eeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCCCcceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceehhhhhccCCCCCceeeeeeccccccc
Q 016531 346 GSSLAVAVLTNSIPAEQPKWSLEAFSLRLLM 376 (388)
Q Consensus 346 g~tl~aavvl~~ip~~~~~~~l~~~~~~~~~ 376 (388)
||||||||||||||+|||||||||+.+.+-.
T Consensus 432 G~tLtaAvvln~ip~~~~~vfl~G~~sK~~r 462 (620)
T PLN02869 432 GSSLAVAVVLNSIPKGTTQVLFRGNLSKVAY 462 (620)
T ss_pred CCchHHHHHHHhcCCCCceEEEecCccHHHH
Confidence 9999999999999999999999999987643
|
|
| >COG3000 ERG3 Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
|---|
| >KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases | Back alignment and domain information |
|---|
| >KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
| >PLN02434 fatty acid hydroxylase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 388 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 59/419 (14%), Positives = 117/419 (27%), Gaps = 126/419 (30%)
Query: 24 RYGSAFPVTEQP-------KAVTGSSTSILKSSKLTE-----REIGGTQFPIWRLDGVIL 71
+Y V E K V SIL ++ + GT W L
Sbjct: 17 QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW-----TL 71
Query: 72 MALLHAGPVEFV-------YYWLHRALHHH----------YLYSRSHHHSSIVPEPITSV 114
++ +FV Y +L + Y+ R ++ +V
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 115 TRPFAEHITYFVLFATPLITTALT--------------GAG------------SIVPAFG 148
+R + + AL G+G +
Sbjct: 132 SRL--QPYLK--------LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 149 Y-ITYIDLMNNMGHCNFGLIPKWLFTIFPPLKYLMYTPSPLTASYAAPGELLDDSLDVVY 207
+ I ++ N+ +CN P+ + + L Y + + +++ +L S+
Sbjct: 182 FKIFWL----NLKNCN---SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ-AE 233
Query: 208 LTHLTTPESIYHMRLGLASLASKPHQHA----SSEWYKWLLWPVTLFS-----MMITWIY 258
L L L SKP+++ + F+ ++ T
Sbjct: 234 LRRL---------------LKSKPYENCLLVLLNVQNAKA---WNAFNLSCKILLTTRFK 275
Query: 259 GRTFVVERNRLNKLKLQTWAKS---KYNMQYFSQQPNESINRLIEEAILEAEEKGA-RVI 314
T + + L + + + + L E + R +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL-----TTNPRRL 330
Query: 315 SL-GLLNQGEELNRYGGLFVHKNPELKIKVVDGSSLAVAVLTNSIPAEQPK--WSLEAF 370
S+ + + L + + H N + +++ S + VL PAE K L F
Sbjct: 331 SIIAESIR-DGLATWDN-WKHVNCDKLTTIIESS---LNVLE---PAEYRKMFDRLSVF 381
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00