Citrus Sinensis ID: 016578

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccHHHHccccccEEEEEcccccEEEEEEEEEEEEEcccccEEEEEEEcccccEEEEcccEEEEccccHHHHHHcccccccccccccEEEEEcccccHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHcccccEEEEEEcccccccHHHHcccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHccccccEEEEEEEEEccccHHHHHHHHccccccccccccccHHHHHHHHHccccccccccHHHHHHHccccHHHHHHHHHcccccccccccccc
ccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccEEEccccccccccccccccccccccHHccccccEcccccccccEEEEEccEEEEEEEccccEEEEEEEcccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHccccccEEEEEEccHHHHHHHHHHcHHHHccHHHcccEEEEEccHHHHHHcccccEEEEEEEccccEccccHHHcHHHHHHHHHHEEEEEEEEEEcccccccHHHHHHHHHHHHccccccEEEEEEEcccccccEEEEEEEEcccccccccccccccHcccHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEcc
meggegkglgcqktmdgkesnkngsagaipscclkarasapeldakcHSTVVSgwfsesqstsdktgktmyfnnpmwpayrLLHHVcsiccscsfageahSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIahlplcsipspktvlvvgggdggvlreisrhdsvelidicEIDKMVIDVSKKyfpelavgfedprvrlhiGDAVEFlrqvprgkydaiivdssdpvgpaqelvekpfFDTIAKALrpggvlcnmAESMWLHTHLIEDMISICRETFkgsvhyawasvptypsgiIGFLIcstegphvdfvnpinpieklegadkHKRELRFYNSEIHSAAFALPAFLKREVsvlgdsptpsqricvs
meggegkglgcqktmdgkesnkngsaGAIPSCCLKARASAPELDAKCHSTVvsgwfsesqstsdktgKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLplcsipspKTVLVVGGGDGGVLreisrhdsvelidiceIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAveflrqvpRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSvlgdsptpsqricvs
MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTvlvvgggdggvlREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
*******************************CCLKA******LDAKCHSTVVSGWF***********KTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV**************
*************************************************TVVSGWFSESQSTSDKTG********MWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL*D*PTP**RICV*
********LGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGW**********TGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSV**************
**********************************************CHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLG************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVLGDSPTPSQRICVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q94BN2359 Spermine synthase OS=Arab yes no 0.917 0.988 0.768 1e-157
O82147316 Spermidine synthase OS=Co N/A no 0.751 0.920 0.659 1e-126
O48659308 Spermidine synthase 2 OS= N/A no 0.751 0.944 0.637 1e-123
Q96556308 Spermidine synthase 1 OS= N/A no 0.762 0.957 0.623 1e-122
Q9ZTR1334 Spermidine synthase 1 OS= N/A no 0.751 0.871 0.629 1e-122
Q96557317 Spermidine synthase 2 OS= N/A no 0.772 0.943 0.626 1e-121
Q9SMB1323 Spermidine synthase 1 OS= no no 0.751 0.900 0.640 1e-121
Q9ZS45342 Spermidine synthase OS=So N/A no 0.759 0.859 0.636 1e-121
Q9ZUB3334 Spermidine synthase 1 OS= no no 0.808 0.937 0.585 1e-121
Q9ZTR0342 Spermidine synthase 2 OS= N/A no 0.749 0.847 0.628 1e-120
>sp|Q94BN2|SPSY_ARATH Spermine synthase OS=Arabidopsis thaliana GN=SPMS PE=1 SV=1 Back     alignment and function desciption
 Score =  556 bits (1433), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/375 (76%), Positives = 315/375 (84%), Gaps = 20/375 (5%)

Query: 1   MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQ 60
           MEG  G GL CQ TMDGK SN NG    +PSCCLKA A  PE DAKCHSTVVSGWFSE  
Sbjct: 1   MEGDVGIGLVCQNTMDGKASNGNGLEKTVPSCCLKAMACVPEDDAKCHSTVVSGWFSEPH 60

Query: 61  STSDKTG-KTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVL 119
             S K G K +YFNNPMWP                  GEAHSLKV+++LFK KS++QEVL
Sbjct: 61  PRSGKKGGKAVYFNNPMWP------------------GEAHSLKVEKVLFKDKSDFQEVL 102

Query: 120 VFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREIS 179
           VFES  YGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSI SPK VLVVGGGDGGVLREIS
Sbjct: 103 VFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREIS 162

Query: 180 RHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAII 239
           RH SVE+IDICEIDKMVIDVSKK+FPELAVGF+DPRV+LHIGDA EFLR+ P GKYDAII
Sbjct: 163 RHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAII 222

Query: 240 VDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGS 299
           VDSSDPVGPA  LVEKPFF+T+A+AL+PGGVLCNMAESMWLHTHLIEDMISICR+TFK S
Sbjct: 223 VDSSDPVGPALALVEKPFFETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFK-S 281

Query: 300 VHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSA 359
           VHYAW+SVPTYPSG+IGF++CSTEGP VDF NPINPIEKL+GA  HKREL+FYNS++H A
Sbjct: 282 VHYAWSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRA 341

Query: 360 AFALPAFLKREVSVL 374
           AFALP FL+REV+ L
Sbjct: 342 AFALPTFLRREVASL 356

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 2
>sp|O82147|SPDE_COFAR Spermidine synthase OS=Coffea arabica PE=2 SV=1 Back     alignment and function description
>sp|O48659|SPD2_HYONI Spermidine synthase 2 OS=Hyoscyamus niger PE=2 SV=1 Back     alignment and function description
>sp|Q96556|SPD1_DATST Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|Q9ZTR1|SPD1_PEA Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q96557|SPD2_DATST Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1 Back     alignment and function description
>sp|Q9SMB1|SPD1_ORYSJ Spermidine synthase 1 OS=Oryza sativa subsp. japonica GN=SPDSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZS45|SPDE_SOLLC Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUB3|SPD1_ARATH Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZTR0|SPD2_PEA Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
255545020368 spermidine synthase 1, putative [Ricinus 0.950 1.0 0.819 1e-172
225462753369 PREDICTED: spermine synthase [Vitis vini 0.953 1.0 0.803 1e-172
147767804369 hypothetical protein VITISV_020278 [Viti 0.953 1.0 0.803 1e-171
224120662347 predicted protein [Populus trichocarpa] 0.888 0.991 0.823 1e-167
126153733361 spermine synthase [Lotus japonicus] 0.925 0.991 0.800 1e-166
449456381365 PREDICTED: spermine synthase-like [Cucum 0.943 1.0 0.775 1e-166
302143671355 unnamed protein product [Vitis vinifera] 0.917 1.0 0.806 1e-166
357463867358 Spermidine synthase [Medicago truncatula 0.904 0.977 0.798 1e-166
73486701369 spermine synthase [Malus sylvestris] 0.945 0.991 0.770 1e-165
363808324362 uncharacterized protein LOC100816988 [Gl 0.925 0.988 0.797 1e-164
>gi|255545020|ref|XP_002513571.1| spermidine synthase 1, putative [Ricinus communis] gi|223547479|gb|EEF48974.1| spermidine synthase 1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/387 (81%), Positives = 337/387 (87%), Gaps = 19/387 (4%)

Query: 1   MEGGEGKGLGCQKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQ 60
           ME G G+GL CQ+TMDGK ++ NGS   IPSCCLKARASAPELDAKCHSTVVSGWFSESQ
Sbjct: 1   MEDGVGRGLECQRTMDGKVNDWNGSED-IPSCCLKARASAPELDAKCHSTVVSGWFSESQ 59

Query: 61  STSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLV 120
           S S    K +YFNNPMWP                  GEAHSL+VK IL+KGKSEYQE+LV
Sbjct: 60  SGSGTASKRVYFNNPMWP------------------GEAHSLEVKNILYKGKSEYQEILV 101

Query: 121 FESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISR 180
           FES AYGKVLVLDGIVQLTEKDECAYQEMI HLPLCSIPSPK+VLVVGGGDGGVLREISR
Sbjct: 102 FESSAYGKVLVLDGIVQLTEKDECAYQEMIVHLPLCSIPSPKSVLVVGGGDGGVLREISR 161

Query: 181 HDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIV 240
           H SVELIDICEIDKMVIDV K++FPEL VGFEDPRVRLH+GDAVEFLR  P GKYDAIIV
Sbjct: 162 HSSVELIDICEIDKMVIDVCKEFFPELYVGFEDPRVRLHVGDAVEFLRLAPVGKYDAIIV 221

Query: 241 DSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSV 300
           DSSDPVGPAQELVEKPFF TIAKALRPGGVLCNMAESMWLHTHLI+DMISICRETFKGSV
Sbjct: 222 DSSDPVGPAQELVEKPFFQTIAKALRPGGVLCNMAESMWLHTHLIQDMISICRETFKGSV 281

Query: 301 HYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAA 360
           HYAWASVPTYPSG+IGFLICSTEGP VDF+NP+NPIEKLEGADK+KRELRFYNSEIHSAA
Sbjct: 282 HYAWASVPTYPSGVIGFLICSTEGPPVDFLNPVNPIEKLEGADKYKRELRFYNSEIHSAA 341

Query: 361 FALPAFLKREVSVLGDSPTPSQRICVS 387
           FALP FLKREV +L DSP  ++ I VS
Sbjct: 342 FALPTFLKREVRLLRDSPIGAKGIHVS 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225462753|ref|XP_002270790.1| PREDICTED: spermine synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147767804|emb|CAN73402.1| hypothetical protein VITISV_020278 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224120662|ref|XP_002318386.1| predicted protein [Populus trichocarpa] gi|222859059|gb|EEE96606.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|126153733|emb|CAM35498.1| spermine synthase [Lotus japonicus] Back     alignment and taxonomy information
>gi|449456381|ref|XP_004145928.1| PREDICTED: spermine synthase-like [Cucumis sativus] gi|449497322|ref|XP_004160371.1| PREDICTED: spermine synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|302143671|emb|CBI22532.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357463867|ref|XP_003602215.1| Spermidine synthase [Medicago truncatula] gi|355491263|gb|AES72466.1| Spermidine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|73486701|dbj|BAE19758.1| spermine synthase [Malus sylvestris] Back     alignment and taxonomy information
>gi|363808324|ref|NP_001242248.1| uncharacterized protein LOC100816988 [Glycine max] gi|255635898|gb|ACU18296.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2016129340 SPDS2 "spermidine synthase 2" 0.710 0.808 0.636 1.8e-101
ASPGD|ASPL0000062169292 spdA [Emericella nidulans (tax 0.687 0.910 0.450 8.7e-65
MGI|MGI:102690302 Srm "spermidine synthase" [Mus 0.710 0.910 0.446 4.7e-64
DICTYBASE|DDB_G0268630284 spsA "Spermidine synthase" [Di 0.689 0.940 0.440 6e-64
UNIPROTKB|P19623302 SRM "Spermidine synthase" [Hom 0.710 0.910 0.439 7.6e-64
CGD|CAL0006284297 SPE3 [Candida albicans (taxid: 0.679 0.885 0.453 1.6e-63
SGD|S000006273293 SPE3 "Spermidine synthase" [Sa 0.692 0.914 0.440 1.6e-63
RGD|620796302 Srm "spermidine synthase" [Rat 0.710 0.910 0.439 2e-63
GENEDB_PFALCIPARUM|PF11_0301321 PF11_0301 "spermidine synthase 0.700 0.844 0.485 5.4e-63
UNIPROTKB|Q8II73321 PF11_0301 "Spermidine synthase 0.700 0.844 0.485 5.4e-63
TAIR|locus:2016129 SPDS2 "spermidine synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 975 (348.3 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
 Identities = 175/275 (63%), Positives = 222/275 (80%)

Query:    97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLC 156
             GEAHSLKV++ILF+GKS+YQ+V+VF+S  YGKVLVLDG++QLTE+DECAYQEMI HLPLC
Sbjct:    61 GEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLC 120

Query:   157 SIPSPKTXXXXXXXXXXXXREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRV 216
             SI +PK             RE++RH SVE IDICEIDKMV+DV+K+YFP +AVG+EDPRV
Sbjct:   121 SISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRV 180

Query:   217 RLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAE 276
              L IGD V FL+    G YDA+IVDSSDP+GPA+EL EKPFF+++ +ALRPGGV+C  AE
Sbjct:   181 NLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFESVNRALRPGGVVCTQAE 240

Query:   277 SMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPI 336
             S+WLH  +IED++S CR+ FKGSV+YAW SVPTYPSG+IGF++CS+EGP VDF  P++ I
Sbjct:   241 SLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCSSEGPQVDFKKPVSLI 300

Query:   337 EKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 371
             +  E + K    L++YN+EIHSAAF LP+F K+ +
Sbjct:   301 DTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKKVI 335
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0004766 "spermidine synthase activity" evidence=IDA
GO:0008295 "spermidine biosynthetic process" evidence=RCA;IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009069 "serine family amino acid metabolic process" evidence=RCA
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
ASPGD|ASPL0000062169 spdA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
MGI|MGI:102690 Srm "spermidine synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268630 spsA "Spermidine synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P19623 SRM "Spermidine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
CGD|CAL0006284 SPE3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000006273 SPE3 "Spermidine synthase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
RGD|620796 Srm "spermidine synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF11_0301 PF11_0301 "spermidine synthase" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8II73 PF11_0301 "Spermidine synthase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94BN2SPSY_ARATH2, ., 5, ., 1, ., 2, 20.7680.91730.9888yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.5.1.22LOW CONFIDENCE prediction!
4th Layer2.5.1.160.946
3rd Layer2.5.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
pVvSPMS
SubName- Full=Chromosome undetermined scaffold_171, whole genome shotgun sequence; (369 aa)
(Vitis vinifera)
Predicted Functional Partners:
SAMDC
SubName- Full=Putative uncharacterized protein (Chromosome chr14 scaffold_9, whole genome shotg [...] (360 aa)
     •• 0.955
pVvSAMDC
SubName- Full=Chromosome chr1 scaffold_22, whole genome shotgun sequence; (360 aa)
     •• 0.940
GSVIVG00016806001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (496 aa)
•   ••• 0.939
GSVIVG00019871001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (350 aa)
     •• 0.921
GSVIVG00017121001
SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (387 aa)
     •• 0.919
ACS1
SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_1179, whole ge [...] (469 aa)
     •• 0.916
grip58
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (265 aa)
     •• 0.916
GSVIVG00026899001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (474 aa)
     •  0.899
GSVIVG00016601001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (445 aa)
     •  0.899
GSVIVG00026399001
SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (348 aa)
•     • 0.572

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
PLN02366308 PLN02366, PLN02366, spermidine synthase 0.0
PRK00811283 PRK00811, PRK00811, spermidine synthase; Provision 1e-113
pfam01564240 pfam01564, Spermine_synth, Spermine/spermidine syn 1e-107
TIGR00417271 TIGR00417, speE, spermidine synthase 1e-103
COG0421282 COG0421, SpeE, Spermidine synthase [Amino acid tra 1e-100
PLN02823336 PLN02823, PLN02823, spermine synthase 3e-53
PRK03612521 PRK03612, PRK03612, spermidine synthase; Provision 2e-29
COG4262508 COG4262, COG4262, Predicted spermidine synthase wi 5e-28
PRK01581374 PRK01581, speE, spermidine synthase; Validated 3e-24
PRK00536262 PRK00536, speE, spermidine synthase; Provisional 3e-18
cd02440107 cd02440, AdoMet_MTases, S-adenosylmethionine-depen 3e-12
PRK04457262 PRK04457, PRK04457, spermidine synthase; Provision 7e-12
pfam13659117 pfam13659, Methyltransf_26, Methyltransferase doma 2e-10
pfam12847104 pfam12847, Methyltransf_18, Methyltransferase doma 1e-06
COG2521287 COG2521, COG2521, Predicted archaeal methyltransfe 3e-06
pfam13578105 pfam13578, Methyltransf_24, Methyltransferase doma 3e-05
COG4122219 COG4122, COG4122, Predicted O-methyltransferase [G 6e-05
pfam05430124 pfam05430, Methyltransf_30, S-adenosyl-L-methionin 1e-04
pfam11899376 pfam11899, DUF3419, Protein of unknown function (D 0.002
pfam05175170 pfam05175, MTS, Methyltransferase small domain 0.002
pfam0824298 pfam08242, Methyltransf_12, Methyltransferase doma 0.004
>gnl|CDD|215208 PLN02366, PLN02366, spermidine synthase Back     alignment and domain information 
 Score =  594 bits (1533), Expect = 0.0
 Identities = 234/337 (69%), Positives = 273/337 (81%), Gaps = 32/337 (9%)

Query: 38  ASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAG 97
           A+APE +AKCHSTV+ GWFSE               +PMWP                  G
Sbjct: 1   AAAPESEAKCHSTVIPGWFSEI--------------SPMWP------------------G 28

Query: 98  EAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCS 157
           EAHSLKV+++LF+GKS++Q+VLVFES  YGKVLVLDG++QLTE+DECAYQEMI HLPLCS
Sbjct: 29  EAHSLKVEKVLFQGKSDFQDVLVFESATYGKVLVLDGVIQLTERDECAYQEMITHLPLCS 88

Query: 158 IPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVR 217
           IP+PK VLVVGGGDGGVLREI+RH SVE IDICEIDKMVIDVSKK+FP+LAVGF+DPRV 
Sbjct: 89  IPNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVN 148

Query: 218 LHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 277
           LHIGD VEFL+  P G YDAIIVDSSDPVGPAQEL EKPFF+++A+ALRPGGV+C  AES
Sbjct: 149 LHIGDGVEFLKNAPEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAES 208

Query: 278 MWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIE 337
           MWLH  LIED+I+ICRETFKGSV+YAW +VPTYPSG+IGF++CS EGP VDF +P+NPI+
Sbjct: 209 MWLHMDLIEDLIAICRETFKGSVNYAWTTVPTYPSGVIGFVLCSKEGPAVDFKHPVNPID 268

Query: 338 KLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL 374
           KLEGA K KR L+FYNSE+H AAF LP+F KRE+  L
Sbjct: 269 KLEGAGKAKRPLKFYNSEVHRAAFCLPSFAKRELESL 305

Length = 308
>gnl|CDD|234843 PRK00811, PRK00811, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|216573 pfam01564, Spermine_synth, Spermine/spermidine synthase Back     alignment and domain information
>gnl|CDD|188048 TIGR00417, speE, spermidine synthase Back     alignment and domain information
>gnl|CDD|223498 COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|178418 PLN02823, PLN02823, spermine synthase Back     alignment and domain information
>gnl|CDD|235139 PRK03612, PRK03612, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|226713 COG4262, COG4262, Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|234961 PRK01581, speE, spermidine synthase; Validated Back     alignment and domain information
>gnl|CDD|134311 PRK00536, speE, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|100107 cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>gnl|CDD|179854 PRK04457, PRK04457, spermidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|222295 pfam13659, Methyltransf_26, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|221804 pfam12847, Methyltransf_18, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|225319 COG2521, COG2521, Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|222236 pfam13578, Methyltransf_24, Methyltransferase domain Back     alignment and domain information
>gnl|CDD|226607 COG4122, COG4122, Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>gnl|CDD|203249 pfam05430, Methyltransf_30, S-adenosyl-L-methionine-dependent methyltransferase Back     alignment and domain information
>gnl|CDD|221301 pfam11899, DUF3419, Protein of unknown function (DUF3419) Back     alignment and domain information
>gnl|CDD|203189 pfam05175, MTS, Methyltransferase small domain Back     alignment and domain information
>gnl|CDD|219760 pfam08242, Methyltransf_12, Methyltransferase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PLN02366308 spermidine synthase 100.0
KOG1562337 consensus Spermidine synthase [Amino acid transpor 100.0
PRK00536262 speE spermidine synthase; Provisional 100.0
COG0421282 SpeE Spermidine synthase [Amino acid transport and 100.0
PRK00811283 spermidine synthase; Provisional 100.0
PLN02823336 spermine synthase 100.0
TIGR00417270 speE spermidine synthase. the SpeE subunit of sper 100.0
PF01564246 Spermine_synth: Spermine/spermidine synthase; Inte 100.0
PRK03612521 spermidine synthase; Provisional 100.0
PRK01581374 speE spermidine synthase; Validated 100.0
COG4262508 Predicted spermidine synthase with an N-terminal m 100.0
PRK04457262 spermidine synthase; Provisional 99.92
PF12847112 Methyltransf_18: Methyltransferase domain; PDB: 3G 99.58
COG2521287 Predicted archaeal methyltransferase [General func 99.55
PF13659117 Methyltransf_26: Methyltransferase domain; PDB: 3G 99.51
PF05175170 MTS: Methyltransferase small domain; InterPro: IPR 99.44
TIGR00091194 tRNA (guanine-N(7)-)-methyltransferase. In E. coli 99.44
PRK00121202 trmB tRNA (guanine-N(7)-)-methyltransferase; Revie 99.41
COG4123248 Predicted O-methyltransferase [General function pr 99.41
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 99.37
PLN02476278 O-methyltransferase 99.36
COG4122219 Predicted O-methyltransferase [General function pr 99.35
PF01596205 Methyltransf_3: O-methyltransferase; InterPro: IPR 99.35
PF13847152 Methyltransf_31: Methyltransferase domain; PDB: 3T 99.35
TIGR00138181 gidB 16S rRNA methyltransferase GidB. GidB (glucos 99.34
TIGR02469124 CbiT precorrin-6Y C5,15-methyltransferase (decarbo 99.34
PRK15128396 23S rRNA m(5)C1962 methyltransferase; Provisional 99.34
PLN02781234 Probable caffeoyl-CoA O-methyltransferase 99.33
PRK15001378 SAM-dependent 23S ribosomal RNA mG1835 methyltrans 99.31
COG4106257 Tam Trans-aconitate methyltransferase [General fun 99.31
TIGR03533284 L3_gln_methyl protein-(glutamine-N5) methyltransfe 99.31
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 99.31
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 99.3
PRK14121390 tRNA (guanine-N(7)-)-methyltransferase; Provisiona 99.3
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 99.3
PRK00107187 gidB 16S rRNA methyltransferase GidB; Reviewed 99.29
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 99.28
PRK08287187 cobalt-precorrin-6Y C(15)-methyltransferase; Valid 99.28
PRK09489342 rsmC 16S ribosomal RNA m2G1207 methyltransferase; 99.27
PRK11036255 putative S-adenosyl-L-methionine-dependent methylt 99.26
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 99.26
COG2230283 Cfa Cyclopropane fatty acid synthase and related m 99.26
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 99.25
PRK00377198 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; 99.22
COG2813300 RsmC 16S RNA G1207 methylase RsmC [Translation, ri 99.22
PF13649101 Methyltransf_25: Methyltransferase domain; PDB: 3B 99.22
PLN02244340 tocopherol O-methyltransferase 99.22
PLN02233261 ubiquinone biosynthesis methyltransferase 99.22
PRK11805307 N5-glutamine S-adenosyl-L-methionine-dependent met 99.21
TIGR03704251 PrmC_rel_meth putative protein-(glutamine-N5) meth 99.21
COG1092393 Predicted SAM-dependent methyltransferases [Genera 99.2
PRK13942212 protein-L-isoaspartate O-methyltransferase; Provis 99.2
COG2242187 CobL Precorrin-6B methylase 2 [Coenzyme metabolism 99.2
PF02353273 CMAS: Mycolic acid cyclopropane synthetase; InterP 99.2
TIGR00080215 pimt protein-L-isoaspartate(D-aspartate) O-methylt 99.2
PRK14966423 unknown domain/N5-glutamine S-adenosyl-L-methionin 99.2
TIGR00740239 methyltransferase, putative. A simple BLAST search 99.19
PRK11207197 tellurite resistance protein TehB; Provisional 99.19
TIGR03534251 RF_mod_PrmC protein-(glutamine-N5) methyltransfera 99.19
COG2518209 Pcm Protein-L-isoaspartate carboxylmethyltransfera 99.19
PRK13944205 protein-L-isoaspartate O-methyltransferase; Provis 99.19
PLN02589247 caffeoyl-CoA O-methyltransferase 99.19
PRK07402196 precorrin-6B methylase; Provisional 99.19
TIGR00537179 hemK_rel_arch HemK-related putative methylase. The 99.18
PF02390195 Methyltransf_4: Putative methyltransferase ; Inter 99.18
PRK14967223 putative methyltransferase; Provisional 99.18
TIGR02072240 BioC biotin biosynthesis protein BioC. This enzyme 99.17
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 99.16
PRK10909199 rsmD 16S rRNA m(2)G966-methyltransferase; Provisio 99.16
PF0824299 Methyltransf_12: Methyltransferase domain; InterPr 99.16
TIGR00536284 hemK_fam HemK family putative methylases. The gene 99.16
PLN03075296 nicotianamine synthase; Provisional 99.15
PRK04266226 fibrillarin; Provisional 99.15
PF01135209 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl 99.14
COG2519256 GCD14 tRNA(1-methyladenosine) methyltransferase an 99.13
PRK09328275 N5-glutamine S-adenosyl-L-methionine-dependent met 99.13
smart00828224 PKS_MT Methyltransferase in polyketide synthase (P 99.13
PRK10258251 biotin biosynthesis protein BioC; Provisional 99.12
PRK11783702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 99.12
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 99.11
PLN02396322 hexaprenyldihydroxybenzoate methyltransferase 99.1
PRK00517250 prmA ribosomal protein L11 methyltransferase; Revi 99.1
PRK11873272 arsM arsenite S-adenosylmethyltransferase; Reviewe 99.1
COG0220227 Predicted S-adenosylmethionine-dependent methyltra 99.09
PRK14968188 putative methyltransferase; Provisional 99.08
PLN02490340 MPBQ/MSBQ methyltransferase 99.07
PRK01544 506 bifunctional N5-glutamine S-adenosyl-L-methionine- 99.07
COG2227243 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- 99.07
PF05401201 NodS: Nodulation protein S (NodS); InterPro: IPR00 99.07
PF10672286 Methyltrans_SAM: S-adenosylmethionine-dependent me 99.06
TIGR00406288 prmA ribosomal protein L11 methyltransferase. Ribo 99.05
PLN02336475 phosphoethanolamine N-methyltransferase 99.04
PRK11188209 rrmJ 23S rRNA methyltransferase J; Provisional 99.04
PRK08317241 hypothetical protein; Provisional 99.02
PRK12335287 tellurite resistance protein TehB; Provisional 99.02
KOG1271227 consensus Methyltransferases [General function pre 99.01
COG2890280 HemK Methylase of polypeptide chain release factor 99.01
PRK06922677 hypothetical protein; Provisional 99.01
PRK00312212 pcm protein-L-isoaspartate O-methyltransferase; Re 99.01
PHA03411279 putative methyltransferase; Provisional 99.0
TIGR01177329 conserved hypothetical protein TIGR01177. This fam 99.0
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 98.99
PRK00216239 ubiE ubiquinone/menaquinone biosynthesis methyltra 98.99
PRK11705383 cyclopropane fatty acyl phospholipid synthase; Pro 98.98
PRK11088272 rrmA 23S rRNA methyltransferase A; Provisional 98.98
PRK10901427 16S rRNA methyltransferase B; Provisional 98.98
PF06325295 PrmA: Ribosomal protein L11 methyltransferase (Prm 98.98
smart00650169 rADc Ribosomal RNA adenine dimethylases. 98.97
cd02440107 AdoMet_MTases S-adenosylmethionine-dependent methy 98.97
PRK13943322 protein-L-isoaspartate O-methyltransferase; Provis 98.97
TIGR00438188 rrmJ cell division protein FtsJ. 98.96
TIGR00095189 RNA methyltransferase, RsmD family. This model rep 98.96
PRK14902444 16S rRNA methyltransferase B; Provisional 98.94
KOG2352482 consensus Predicted spermine/spermidine synthase [ 98.94
COG2264300 PrmA Ribosomal protein L11 methylase [Translation, 98.93
PF03602183 Cons_hypoth95: Conserved hypothetical protein 95; 98.93
PRK14904445 16S rRNA methyltransferase B; Provisional 98.93
TIGR00446264 nop2p NOL1/NOP2/sun family putative RNA methylase. 98.92
TIGR02716306 C20_methyl_CrtF C-20 methyltransferase BchU. Membe 98.92
TIGR03587204 Pse_Me-ase pseudaminic acid biosynthesis-associate 98.92
PF08704247 GCD14: tRNA methyltransferase complex GCD14 subuni 98.91
PLN02672 1082 methionine S-methyltransferase 98.91
PLN02336 475 phosphoethanolamine N-methyltransferase 98.91
KOG1270282 consensus Methyltransferases [Coenzyme transport a 98.9
PHA03412241 putative methyltransferase; Provisional 98.89
PRK15068322 tRNA mo(5)U34 methyltransferase; Provisional 98.89
KOG1540296 consensus Ubiquinone biosynthesis methyltransferas 98.89
TIGR02021219 BchM-ChlM magnesium protoporphyrin O-methyltransfe 98.88
TIGR03438301 probable methyltransferase. This model represents 98.87
TIGR00563426 rsmB ribosomal RNA small subunit methyltransferase 98.87
PF03848192 TehB: Tellurite resistance protein TehB; InterPro: 98.86
KOG2899288 consensus Predicted methyltransferase [General fun 98.86
PRK14903431 16S rRNA methyltransferase B; Provisional 98.86
PRK05134233 bifunctional 3-demethylubiquinone-9 3-methyltransf 98.85
TIGR03840213 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d 98.85
PRK14901434 16S rRNA methyltransferase B; Provisional 98.85
TIGR00452314 methyltransferase, putative. Known examples to dat 98.84
PTZ00146293 fibrillarin; Provisional 98.84
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 98.82
PRK01544506 bifunctional N5-glutamine S-adenosyl-L-methionine- 98.81
PRK13168443 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe 98.8
TIGR01983224 UbiG ubiquinone biosynthesis O-methyltransferase. 98.8
PRK05785226 hypothetical protein; Provisional 98.79
PRK13255218 thiopurine S-methyltransferase; Reviewed 98.78
TIGR00479431 rumA 23S rRNA (uracil-5-)-methyltransferase RumA. 98.76
PRK06202232 hypothetical protein; Provisional 98.76
KOG3010261 consensus Methyltransferase [General function pred 98.75
PRK07580230 Mg-protoporphyrin IX methyl transferase; Validated 98.74
PF05891218 Methyltransf_PK: AdoMet dependent proline di-methy 98.74
PRK03522315 rumB 23S rRNA methyluridine methyltransferase; Rev 98.73
COG0742187 N6-adenine-specific methylase [DNA replication, re 98.72
PF07021193 MetW: Methionine biosynthesis protein MetW; InterP 98.72
COG2263198 Predicted RNA methylase [Translation, ribosomal st 98.72
PRK04338 382 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.72
KOG4300252 consensus Predicted methyltransferase [General fun 98.7
TIGR02085374 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer 98.69
smart00138264 MeTrc Methyltransferase, chemotaxis proteins. Meth 98.69
PLN02585315 magnesium protoporphyrin IX methyltransferase 98.67
KOG1663237 consensus O-methyltransferase [Secondary metabolit 98.66
COG3963194 Phospholipid N-methyltransferase [Lipid metabolism 98.65
PF02475200 Met_10: Met-10+ like-protein; InterPro: IPR003402 98.64
PF00891241 Methyltransf_2: O-methyltransferase; InterPro: IPR 98.59
PRK05031362 tRNA (uracil-5-)-methyltransferase; Validated 98.58
TIGR00308 374 TRM1 tRNA(guanine-26,N2-N2) methyltransferase. Thi 98.57
TIGR02143353 trmA_only tRNA (uracil-5-)-methyltransferase. This 98.56
PTZ00338294 dimethyladenosine transferase-like protein; Provis 98.55
PRK11727321 23S rRNA mA1618 methyltransferase; Provisional 98.53
PRK13256226 thiopurine S-methyltransferase; Reviewed 98.52
TIGR02081194 metW methionine biosynthesis protein MetW. This pr 98.5
PRK14896258 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.49
COG4976287 Predicted methyltransferase (contains TPR repeat) 98.48
KOG2904328 consensus Predicted methyltransferase [General fun 98.47
PF10294173 Methyltransf_16: Putative methyltransferase; Inter 98.46
PF05724218 TPMT: Thiopurine S-methyltransferase (TPMT); Inter 98.44
PRK00274272 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 98.44
COG0030259 KsgA Dimethyladenosine transferase (rRNA methylati 98.43
PF05185448 PRMT5: PRMT5 arginine-N-methyltransferase; InterPr 98.41
COG1041347 Predicted DNA modification methylase [DNA replicat 98.4
COG2520341 Predicted methyltransferase [General function pred 98.39
KOG1661237 consensus Protein-L-isoaspartate(D-aspartate) O-me 98.39
PF09445163 Methyltransf_15: RNA cap guanine-N2 methyltransfer 98.38
TIGR00755253 ksgA dimethyladenosine transferase. Alternate name 98.34
PRK11933 470 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; 98.33
PF01170179 UPF0020: Putative RNA methylase family UPF0020; In 98.31
PF08003315 Methyltransf_9: Protein of unknown function (DUF16 98.27
PF05219265 DREV: DREV methyltransferase; InterPro: IPR007884 98.26
PF03291331 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 98.24
KOG1541270 consensus Predicted protein carboxyl methylase [Ge 98.24
KOG1709271 consensus Guanidinoacetate methyltransferase and r 98.18
KOG3191209 consensus Predicted N6-DNA-methyltransferase [Tran 98.15
TIGR02987 524 met_A_Alw26 type II restriction m6 adenine DNA met 98.1
PRK00050296 16S rRNA m(4)C1402 methyltranserfase; Provisional 98.1
PF02384311 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T 98.08
PF13578106 Methyltransf_24: Methyltransferase domain; PDB: 3S 98.07
PF01728181 FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 98.06
TIGR00478228 tly hemolysin TlyA family protein. Hemolysins are 98.05
KOG1975389 consensus mRNA cap methyltransferase [RNA processi 98.04
COG2265432 TrmA SAM-dependent methyltransferases related to t 98.03
KOG2940325 consensus Predicted methyltransferase [General fun 98.02
PF02527184 GidB: rRNA small subunit methyltransferase G; Inte 98.0
KOG0820315 consensus Ribosomal RNA adenine dimethylase [RNA p 97.99
PLN02232160 ubiquinone biosynthesis methyltransferase 97.98
COG4076252 Predicted RNA methylase [General function predicti 97.96
PRK11783 702 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi 97.94
COG0144355 Sun tRNA and rRNA cytosine-C5-methylases [Translat 97.89
KOG1499346 consensus Protein arginine N-methyltransferase PRM 97.84
KOG3420185 consensus Predicted RNA methylase [Translation, ri 97.84
KOG2361264 consensus Predicted methyltransferase [General fun 97.82
PF03059276 NAS: Nicotianamine synthase protein; InterPro: IPR 97.81
PRK10742250 putative methyltransferase; Provisional 97.8
PF00398262 RrnaAD: Ribosomal RNA adenine dimethylase; InterPr 97.77
PF05430124 Methyltransf_30: S-adenosyl-L-methionine-dependent 97.77
PF05958352 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferas 97.75
PRK01747 662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 97.74
PF12147311 Methyltransf_20: Putative methyltransferase; Inter 97.69
PF01861243 DUF43: Protein of unknown function DUF43; InterPro 97.68
COG0293205 FtsJ 23S rRNA methylase [Translation, ribosomal st 97.63
COG0357215 GidB Predicted S-adenosylmethionine-dependent meth 97.61
KOG2915314 consensus tRNA(1-methyladenosine) methyltransferas 97.59
PF06080204 DUF938: Protein of unknown function (DUF938); Inte 97.57
PF02005 377 TRM: N2,N2-dimethylguanosine tRNA methyltransferas 97.52
PRK04148134 hypothetical protein; Provisional 97.51
PF08123205 DOT1: Histone methylation protein DOT1 ; InterPro: 97.44
PF01189283 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR 97.44
KOG1500 517 consensus Protein arginine N-methyltransferase CAR 97.39
PF01739196 CheR: CheR methyltransferase, SAM binding domain; 97.38
KOG2730263 consensus Methylase [General function prediction o 97.37
KOG3178342 consensus Hydroxyindole-O-methyltransferase and re 97.33
PF01269229 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibr 97.31
TIGR00006305 S-adenosyl-methyltransferase MraW. Genetics paper 97.27
KOG1562337 consensus Spermidine synthase [Amino acid transpor 97.25
COG1867 380 TRM1 N2,N2-dimethylguanosine tRNA methyltransferas 97.24
PF04816205 DUF633: Family of unknown function (DUF633) ; Inte 97.21
KOG0822649 consensus Protein kinase inhibitor [Cell cycle con 97.19
PF07942270 N2227: N2227-like protein; InterPro: IPR012901 Thi 97.19
COG0116381 Predicted N6-adenine-specific DNA methylase [DNA r 97.18
TIGR03439319 methyl_EasF probable methyltransferase domain, Eas 97.14
PRK11760357 putative 23S rRNA C2498 ribose 2'-O-ribose methylt 97.12
PF04989206 CmcI: Cephalosporin hydroxylase; InterPro: IPR0070 97.09
PF09243274 Rsm22: Mitochondrial small ribosomal subunit Rsm22 97.0
COG0500257 SmtA SAM-dependent methyltransferases [Secondary m 96.92
PRK10611287 chemotaxis methyltransferase CheR; Provisional 96.85
PF01795310 Methyltransf_5: MraW methylase family; InterPro: I 96.83
TIGR01444143 fkbM_fam methyltransferase, FkbM family. Members o 96.79
COG2384226 Predicted SAM-dependent methyltransferase [General 96.67
COG0275314 Predicted S-adenosylmethionine-dependent methyltra 96.67
PF05971299 Methyltransf_10: Protein of unknown function (DUF8 96.66
PF04672267 Methyltransf_19: S-adenosyl methyltransferase; Int 96.65
PF04445234 SAM_MT: Putative SAM-dependent methyltransferase; 96.59
KOG3115249 consensus Methyltransferase-like protein [General 96.56
PRK11524284 putative methyltransferase; Provisional 96.52
COG1352268 CheR Methylase of chemotaxis methyl-accepting prot 96.37
KOG4589232 consensus Cell division protein FtsJ [Cell cycle c 96.34
PF05148219 Methyltransf_8: Hypothetical methyltransferase; In 96.34
PF03141 506 Methyltransf_29: Putative S-adenosyl-L-methionine- 96.32
PF07091251 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 96.31
PF13679141 Methyltransf_32: Methyltransferase domain 96.23
PF06962140 rRNA_methylase: Putative rRNA methylase; InterPro: 96.19
COG1189245 Predicted rRNA methylase [Translation, ribosomal s 96.12
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 96.11
cd00315275 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA meth 96.09
PRK13699227 putative methylase; Provisional 96.07
KOG3987288 consensus Uncharacterized conserved protein DREV/C 96.02
KOG1253 525 consensus tRNA methyltransferase [Translation, rib 96.01
COG3897218 Predicted methyltransferase [General function pred 95.92
COG1889231 NOP1 Fibrillarin-like rRNA methylase [Translation, 95.88
PRK09424 509 pntA NAD(P) transhydrogenase subunit alpha; Provis 95.83
KOG2352 482 consensus Predicted spermine/spermidine synthase [ 95.78
COG1568354 Predicted methyltransferases [General function pre 95.77
COG1064339 AdhP Zn-dependent alcohol dehydrogenases [General 95.68
KOG3045325 consensus Predicted RNA methylase involved in rRNA 95.67
KOG3201201 consensus Uncharacterized conserved protein [Funct 95.67
KOG2187534 consensus tRNA uracil-5-methyltransferase and rela 95.5
KOG1122460 consensus tRNA and rRNA cytosine-C5-methylase (nuc 95.49
KOG2198375 consensus tRNA cytosine-5-methylases and related e 95.49
PF11599246 AviRa: RRNA methyltransferase AviRa; InterPro: IPR 95.12
PRK09880343 L-idonate 5-dehydrogenase; Provisional 95.12
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 95.09
KOG0024354 consensus Sorbitol dehydrogenase [Secondary metabo 95.02
KOG1269364 consensus SAM-dependent methyltransferases [Lipid 95.01
PF14314 675 Methyltrans_Mon: Virus-capping methyltransferase 94.85
COG5459 484 Predicted rRNA methylase [Translation, ribosomal s 94.72
PTZ00357 1072 methyltransferase; Provisional 94.7
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 94.65
cd08283386 FDH_like_1 Glutathione-dependent formaldehyde dehy 94.56
PF04378245 RsmJ: Ribosomal RNA small subunit methyltransferas 94.52
KOG1596317 consensus Fibrillarin and related nucleolar RNA-bi 94.44
PF01234256 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I 94.43
COG0286489 HsdM Type I restriction-modification system methyl 94.32
KOG1099294 consensus SAM-dependent methyltransferase/cell div 94.31
cd08281371 liver_ADH_like1 Zinc-dependent alcohol dehydrogena 94.31
PF00107130 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: 94.23
PRK10309347 galactitol-1-phosphate dehydrogenase; Provisional 94.12
KOG4058199 consensus Uncharacterized conserved protein [Funct 93.9
TIGR03451358 mycoS_dep_FDH mycothiol-dependent formaldehyde deh 93.89
cd08293345 PTGR2 Prostaglandin reductase. Prostaglandins and 93.87
PRK05562223 precorrin-2 dehydrogenase; Provisional 93.83
KOG1501 636 consensus Arginine N-methyltransferase [General fu 93.82
cd05188271 MDR Medium chain reductase/dehydrogenase (MDR)/zin 93.62
TIGR03366280 HpnZ_proposed putative phosphonate catabolism asso 93.44
PF10354166 DUF2431: Domain of unknown function (DUF2431); Int 93.34
KOG2671421 consensus Putative RNA methylase [Replication, rec 93.14
cd08239339 THR_DH_like L-threonine dehydrogenase (TDH)-like. 93.12
PF00145 335 DNA_methylase: C-5 cytosine-specific DNA methylase 92.96
PF11968219 DUF3321: Putative methyltransferase (DUF3321); Int 92.85
KOG0821326 consensus Predicted ribosomal RNA adenine dimethyl 92.83
cd08254338 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo 92.79
TIGR00561 511 pntA NAD(P) transhydrogenase, alpha subunit. In so 92.78
PF05711248 TylF: Macrocin-O-methyltransferase (TylF); InterPr 92.67
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 92.63
PF01555231 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 Th 92.46
COG0604326 Qor NADPH:quinone reductase and related Zn-depende 92.45
COG2961279 ComJ Protein involved in catabolism of external DN 92.2
PLN02740381 Alcohol dehydrogenase-like 92.06
cd08285351 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. 91.96
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 91.92
KOG2078495 consensus tRNA modification enzyme [RNA processing 91.8
cd05278347 FDH_like Formaldehyde dehydrogenases. Formaldehyde 91.71
COG4121252 Uncharacterized conserved protein [Function unknow 91.71
PRK11524284 putative methyltransferase; Provisional 91.66
PLN02827378 Alcohol dehydrogenase-like 91.63
TIGR03201349 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co 91.51
cd08294329 leukotriene_B4_DH_like 13-PGR is a bifunctional en 91.45
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 91.35
cd05285343 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a 91.3
PHA01634156 hypothetical protein 91.28
TIGR01202308 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl 91.14
PF07279218 DUF1442: Protein of unknown function (DUF1442); In 91.08
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 91.04
TIGR02825325 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 91.03
cd08230355 glucose_DH Glucose dehydrogenase. Glucose dehydrog 91.01
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 90.89
COG4798238 Predicted methyltransferase [General function pred 90.88
COG0270328 Dcm Site-specific DNA methylase [DNA replication, 90.83
PLN03154348 putative allyl alcohol dehydrogenase; Provisional 90.77
cd08238410 sorbose_phosphate_red L-sorbose-1-phosphate reduct 90.74
PF12692160 Methyltransf_17: S-adenosyl-L-methionine methyltra 90.74
PF06460299 NSP13: Coronavirus NSP13; InterPro: IPR009461 This 90.64
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 90.63
cd08233351 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog 90.49
KOG2798369 consensus Putative trehalase [Carbohydrate transpo 90.47
cd08232339 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 90.46
TIGR00497501 hsdM type I restriction system adenine methylase ( 90.24
PRK10637 457 cysG siroheme synthase; Provisional 90.21
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 90.14
PLN02353 473 probable UDP-glucose 6-dehydrogenase 89.93
PRK03562621 glutathione-regulated potassium-efflux system prot 89.85
TIGR00675 315 dcm DNA-methyltransferase (dcm). All proteins in t 89.76
cd08295338 double_bond_reductase_like Arabidopsis alkenal dou 89.72
cd08300368 alcohol_DH_class_III class III alcohol dehydrogena 89.26
cd08237341 ribitol-5-phosphate_DH ribitol-5-phosphate dehydro 89.16
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.15
PRK15116268 sulfur acceptor protein CsdL; Provisional 89.15
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 89.13
cd08278365 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be 89.07
PRK06719157 precorrin-2 dehydrogenase; Validated 88.79
TIGR02818368 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr 88.65
KOG2793248 consensus Putative N2,N2-dimethylguanosine tRNA me 88.58
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 88.56
COG0569225 TrkA K+ transport systems, NAD-binding component [ 88.55
PRK08223287 hypothetical protein; Validated 88.45
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 88.25
PRK07502307 cyclohexadienyl dehydrogenase; Validated 88.25
cd08234334 threonine_DH_like L-threonine dehydrogenase. L-thr 88.22
PRK11064 415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 88.19
cd08277365 liver_alcohol_DH_like Liver alcohol dehydrogenase. 88.17
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 88.09
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.05
PRK10669558 putative cation:proton antiport protein; Provision 88.04
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 87.93
PRK03659601 glutathione-regulated potassium-efflux system prot 87.9
PF10237162 N6-adenineMlase: Probable N6-adenine methyltransfe 87.88
cd05279365 Zn_ADH1 Liver alcohol dehydrogenase and related zi 87.84
PRK05597355 molybdopterin biosynthesis protein MoeB; Validated 87.7
KOG1331293 consensus Predicted methyltransferase [General fun 87.68
cd08301369 alcohol_DH_plants Plant alcohol dehydrogenase. NAD 87.54
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 87.43
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 87.4
PRK13699227 putative methylase; Provisional 87.33
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 87.33
COG1179263 Dinucleotide-utilizing enzymes involved in molybdo 87.1
cd08236343 sugar_DH NAD(P)-dependent sugar dehydrogenases. Th 87.06
TIGR02822329 adh_fam_2 zinc-binding alcohol dehydrogenase famil 86.96
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 86.89
PF02636252 Methyltransf_28: Putative S-adenosyl-L-methionine- 86.88
cd08286345 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik 86.83
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 86.75
PRK08618325 ornithine cyclodeaminase; Validated 86.63
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 86.41
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 86.22
PF11899380 DUF3419: Protein of unknown function (DUF3419); In 86.21
PRK06141314 ornithine cyclodeaminase; Validated 86.12
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 86.01
PF01408120 GFO_IDH_MocA: Oxidoreductase family, NAD-binding R 85.79
cd01491286 Ube1_repeat1 Ubiquitin activating enzyme (E1), rep 85.57
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 85.51
PRK09496453 trkA potassium transporter peripheral membrane com 85.49
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 85.43
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 85.39
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 85.34
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 85.33
cd08261337 Zn_ADH7 Alcohol dehydrogenases of the MDR family. 85.3
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 85.25
PRK08268 507 3-hydroxy-acyl-CoA dehydrogenase; Validated 85.23
PF02719293 Polysacc_synt_2: Polysaccharide biosynthesis prote 85.07
COG1062366 AdhC Zn-dependent alcohol dehydrogenases, class II 85.02
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 84.94
cd05288329 PGDH Prostaglandin dehydrogenases. Prostaglandins 84.91
PF11312315 DUF3115: Protein of unknown function (DUF3115); In 84.85
COG0287279 TyrA Prephenate dehydrogenase [Amino acid transpor 84.82
COG1086 588 Predicted nucleoside-diphosphate sugar epimerases 84.8
COG4017254 Uncharacterized protein conserved in archaea [Func 84.72
PRK07340304 ornithine cyclodeaminase; Validated 84.33
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 84.31
cd05281341 TDH Threonine dehydrogenase. L-threonine dehydroge 84.28
cd08255277 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ 84.27
PF00106167 adh_short: short chain dehydrogenase alcohol dehyd 84.05
TIGR02819393 fdhA_non_GSH formaldehyde dehydrogenase, glutathio 83.92
COG1748 389 LYS9 Saccharopine dehydrogenase and related protei 83.92
TIGR00692340 tdh L-threonine 3-dehydrogenase. E. coli His-90 mo 83.81
PRK06949258 short chain dehydrogenase; Provisional 83.8
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 83.6
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 83.4
PRK10083339 putative oxidoreductase; Provisional 82.93
COG1565370 Uncharacterized conserved protein [Function unknow 82.92
PTZ00082321 L-lactate dehydrogenase; Provisional 82.65
cd05290307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 82.49
PRK07523255 gluconate 5-dehydrogenase; Provisional 82.42
cd05293312 LDH_1 A subgroup of L-lactate dehydrogenases. L-la 82.3
PRK09422338 ethanol-active dehydrogenase/acetaldehyde-active r 81.96
PTZ00117319 malate dehydrogenase; Provisional 81.96
PF06859110 Bin3: Bicoid-interacting protein 3 (Bin3); InterPr 81.84
cd08243320 quinone_oxidoreductase_like_1 Quinone oxidoreducta 81.76
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 81.55
PRK05396341 tdh L-threonine 3-dehydrogenase; Validated 81.49
PRK07102243 short chain dehydrogenase; Provisional 81.35
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 81.28
PF03141506 Methyltransf_29: Putative S-adenosyl-L-methionine- 81.04
PRK06124256 gluconate 5-dehydrogenase; Provisional 81.02
cd08231361 MDR_TM0436_like Hypothetical enzyme TM0436 resembl 80.85
cd08263367 Zn_ADH10 Alcohol dehydrogenases of the MDR family. 80.81
PRK08213259 gluconate 5-dehydrogenase; Provisional 80.65
PRK09496 453 trkA potassium transporter peripheral membrane com 80.3
COG1648210 CysG Siroheme synthase (precorrin-2 oxidase/ferroc 80.18
>PLN02366 spermidine synthase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-64  Score=493.87  Aligned_cols=306  Identities=76%  Similarity=1.338  Sum_probs=275.6

Q ss_pred             hcCCccccccccccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCee
Q 016578           38 ASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQE  117 (387)
Q Consensus        38 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~  117 (387)
                      +..||.+.++|..+.++||+|.              .++||                  |..++++++++|++++|+||+
T Consensus         1 ~~~~~~~~~~~~~~~~~w~~e~--------------~~~~~------------------~~~~~~~v~~~l~~~~s~yQ~   48 (308)
T PLN02366          1 AAAPESEAKCHSTVIPGWFSEI--------------SPMWP------------------GEAHSLKVEKVLFQGKSDFQD   48 (308)
T ss_pred             CCCCCCCccccchhhhceEeec--------------ccCCC------------------CceEEEEEeeEEEeccCCCee
Confidence            3579999999999999999997              56899                  999999999999999999999


Q ss_pred             EEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHH
Q 016578          118 VLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVI  197 (387)
Q Consensus       118 I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi  197 (387)
                      |.|++++.+|++|+|||.+|++++||+.||||++|+|++.|++|++||+||||+|++++++++|+++.+|++||||++|+
T Consensus        49 i~v~~~~~~g~~L~lDg~~q~~~~de~~Y~e~l~h~~l~~~~~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi  128 (308)
T PLN02366         49 VLVFESATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVI  128 (308)
T ss_pred             EEEEEcCCCceEEEECCEeeecCccHHHHHHHHHHHHHhhCCCCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998889999999999999


Q ss_pred             HHHHhhcccccCCCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccc
Q 016578          198 DVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES  277 (387)
Q Consensus       198 ~~ar~~~~~~~~~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s  277 (387)
                      +.||++|+..+.+++|||++++++|+++|+++.++++||+||+|+++|.+++..|++.+||+.++++|+|||++++|+++
T Consensus       129 ~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~s  208 (308)
T PLN02366        129 DVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAES  208 (308)
T ss_pred             HHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcCC
Confidence            99999998776668899999999999999986545689999999999999988999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHH
Q 016578          278 MWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIH  357 (387)
Q Consensus       278 ~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h  357 (387)
                      +|.+.+.++.+.++++++|+.++.++++.||+||+|.|||++||++.+..++..|.+..+.+..+.....+|||||+++|
T Consensus       209 ~~~~~~~~~~i~~tl~~~F~~~v~~~~~~vPsy~~g~w~f~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~l~yy~~~~h  288 (308)
T PLN02366        209 MWLHMDLIEDLIAICRETFKGSVNYAWTTVPTYPSGVIGFVLCSKEGPAVDFKHPVNPIDKLEGAGKAKRPLKFYNSEVH  288 (308)
T ss_pred             cccchHHHHHHHHHHHHHCCCceeEEEecCCCcCCCceEEEEEECCCccccccccccccchhhhhhcccCCCeEECHHHH
Confidence            99999999999999999995588999999999999999999999974444555564433221100111246899999999


Q ss_pred             HHHhcCCHHHHHHhhcCC
Q 016578          358 SAAFALPAFLKREVSVLG  375 (387)
Q Consensus       358 ~aaF~lP~~~~~~l~~~~  375 (387)
                      +++|+||+|+++.|+...
T Consensus       289 ~~~f~lp~~~~~~l~~~~  306 (308)
T PLN02366        289 RAAFCLPSFAKRELESLL  306 (308)
T ss_pred             HHHhcChHHHHHHHHhcc
Confidence            999999999999998664

>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00536 speE spermidine synthase; Provisional Back     alignment and domain information
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00811 spermidine synthase; Provisional Back     alignment and domain information
>PLN02823 spermine synthase Back     alignment and domain information
>TIGR00417 speE spermidine synthase Back     alignment and domain information
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2 Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PRK01581 speE spermidine synthase; Validated Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PRK04457 spermidine synthase; Provisional Back     alignment and domain information
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A Back     alignment and domain information
>COG2521 Predicted archaeal methyltransferase [General function prediction only] Back     alignment and domain information
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A Back     alignment and domain information
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases Back     alignment and domain information
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase Back     alignment and domain information
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed Back     alignment and domain information
>COG4123 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>PLN02476 O-methyltransferase Back     alignment and domain information
>COG4122 Predicted O-methyltransferase [General function prediction only] Back     alignment and domain information
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases Back     alignment and domain information
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A Back     alignment and domain information
>TIGR00138 gidB 16S rRNA methyltransferase GidB Back     alignment and domain information
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit Back     alignment and domain information
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional Back     alignment and domain information
>PLN02781 Probable caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional Back     alignment and domain information
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed Back     alignment and domain information
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated Back     alignment and domain information
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional Back     alignment and domain information
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional Back     alignment and domain information
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific Back     alignment and domain information
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] Back     alignment and domain information
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) Back     alignment and domain information
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase Back     alignment and domain information
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific Back     alignment and domain information
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>PLN02589 caffeoyl-CoA O-methyltransferase Back     alignment and domain information
>PRK07402 precorrin-6B methylase; Provisional Back     alignment and domain information
>TIGR00537 hemK_rel_arch HemK-related putative methylase Back     alignment and domain information
>PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 Back     alignment and domain information
>PRK14967 putative methyltransferase; Provisional Back     alignment and domain information
>TIGR02072 BioC biotin biosynthesis protein BioC Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional Back     alignment and domain information
>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>TIGR00536 hemK_fam HemK family putative methylases Back     alignment and domain information
>PLN03075 nicotianamine synthase; Provisional Back     alignment and domain information
>PRK04266 fibrillarin; Provisional Back     alignment and domain information
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 Back     alignment and domain information
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes Back     alignment and domain information
>PRK10258 biotin biosynthesis protein BioC; Provisional Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase Back     alignment and domain information
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed Back     alignment and domain information
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed Back     alignment and domain information
>COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>PRK14968 putative methyltransferase; Provisional Back     alignment and domain information
>PLN02490 MPBQ/MSBQ methyltransferase Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] Back     alignment and domain information
>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins Back     alignment and domain information
>PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species Back     alignment and domain information
>TIGR00406 prmA ribosomal protein L11 methyltransferase Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>KOG1271 consensus Methyltransferases [General function prediction only] Back     alignment and domain information
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06922 hypothetical protein; Provisional Back     alignment and domain information
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed Back     alignment and domain information
>PHA03411 putative methyltransferase; Provisional Back     alignment and domain information
>TIGR01177 conserved hypothetical protein TIGR01177 Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed Back     alignment and domain information
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional Back     alignment and domain information
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional Back     alignment and domain information
>PRK10901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences Back     alignment and domain information
>smart00650 rADc Ribosomal RNA adenine dimethylases Back     alignment and domain information
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) Back     alignment and domain information
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional Back     alignment and domain information
>TIGR00438 rrmJ cell division protein FtsJ Back     alignment and domain information
>TIGR00095 RNA methyltransferase, RsmD family Back     alignment and domain information
>PRK14902 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH Back     alignment and domain information
>PRK14904 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase Back     alignment and domain information
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU Back     alignment and domain information
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase Back     alignment and domain information
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] Back     alignment and domain information
>PLN02672 methionine S-methyltransferase Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] Back     alignment and domain information
>PHA03412 putative methyltransferase; Provisional Back     alignment and domain information
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase Back     alignment and domain information
>TIGR03438 probable methyltransferase Back     alignment and domain information
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB Back     alignment and domain information
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB Back     alignment and domain information
>KOG2899 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PRK14903 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional Back     alignment and domain information
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family Back     alignment and domain information
>PRK14901 16S rRNA methyltransferase B; Provisional Back     alignment and domain information
>TIGR00452 methyltransferase, putative Back     alignment and domain information
>PTZ00146 fibrillarin; Provisional Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information
>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed Back     alignment and domain information
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed Back     alignment and domain information
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase Back     alignment and domain information
>PRK05785 hypothetical protein; Provisional Back     alignment and domain information
>PRK13255 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>KOG3010 consensus Methyltransferase [General function prediction only] Back     alignment and domain information
>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated Back     alignment and domain information
>PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like Back     alignment and domain information
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed Back     alignment and domain information
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins Back     alignment and domain information
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional Back     alignment and domain information
>KOG4300 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB Back     alignment and domain information
>smart00138 MeTrc Methyltransferase, chemotaxis proteins Back     alignment and domain information
>PLN02585 magnesium protoporphyrin IX methyltransferase Back     alignment and domain information
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism] Back     alignment and domain information
>PF02475 Met_10: Met-10+ like-protein; InterPro: IPR003402 This entry represents the Trm5 family Back     alignment and domain information
>PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated Back     alignment and domain information
>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase Back     alignment and domain information
>TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase Back     alignment and domain information
>PTZ00338 dimethyladenosine transferase-like protein; Provisional Back     alignment and domain information
>PRK11727 23S rRNA mA1618 methyltransferase; Provisional Back     alignment and domain information
>PRK13256 thiopurine S-methyltransferase; Reviewed Back     alignment and domain information
>TIGR02081 metW methionine biosynthesis protein MetW Back     alignment and domain information
>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional Back     alignment and domain information
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] Back     alignment and domain information
>KOG2904 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases Back     alignment and domain information
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed Back     alignment and domain information
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] Back     alignment and domain information
>COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>COG2520 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ] Back     alignment and domain information
>TIGR00755 ksgA dimethyladenosine transferase Back     alignment and domain information
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed Back     alignment and domain information
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase Back     alignment and domain information
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes Back     alignment and domain information
>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes Back     alignment and domain information
>KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] Back     alignment and domain information
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family Back     alignment and domain information
>PRK00050 16S rRNA m(4)C1402 methyltranserfase; Provisional Back     alignment and domain information
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 Back     alignment and domain information
>PF13578 Methyltransf_24: Methyltransferase domain; PDB: 3SSO_A 3SSN_C 3SSM_D Back     alignment and domain information
>PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes Back     alignment and domain information
>TIGR00478 tly hemolysin TlyA family protein Back     alignment and domain information
>KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] Back     alignment and domain information
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2940 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF02527 GidB: rRNA small subunit methyltransferase G; InterPro: IPR003682 This entry represents a rRNA small subunit methyltransferase G Back     alignment and domain information
>KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>PLN02232 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>COG4076 Predicted RNA methylase [General function prediction only] Back     alignment and domain information
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional Back     alignment and domain information
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] Back     alignment and domain information
>KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2361 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2 Back     alignment and domain information
>PRK10742 putative methyltransferase; Provisional Back     alignment and domain information
>PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e Back     alignment and domain information
>PF05430 Methyltransf_30: S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR008471 This entry contains several uncharacterised bacterial proteins with no known function Back     alignment and domain information
>PF05958 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferase; InterPro: IPR010280 This family consists of (uracil-5-)-methyltransferases 2 Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length Back     alignment and domain information
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised Back     alignment and domain information
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0357 GidB Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2915 consensus tRNA(1-methyladenosine) methyltransferase, subunit GCD14 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes Back     alignment and domain information
>PF02005 TRM: N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2 Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] Back     alignment and domain information
>PF01189 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR001678 This domain is found in archaeal, bacterial and eukaryotic proteins Back     alignment and domain information
>KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] Back     alignment and domain information
>PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>KOG2730 consensus Methylase [General function prediction only] Back     alignment and domain information
>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] Back     alignment and domain information
>PF01269 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibrillarin is a component of a nucleolar small nuclear ribonucleoprotein (SnRNP), functioning in vivo in ribosomal RNA processing [, ] Back     alignment and domain information
>TIGR00006 S-adenosyl-methyltransferase MraW Back     alignment and domain information
>KOG1562 consensus Spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1867 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins Back     alignment and domain information
>KOG0822 consensus Protein kinase inhibitor [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) Back     alignment and domain information
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family Back     alignment and domain information
>PRK11760 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional Back     alignment and domain information
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) [] Back     alignment and domain information
>PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] Back     alignment and domain information
>PRK10611 chemotaxis methyltransferase CheR; Provisional Back     alignment and domain information
>PF01795 Methyltransf_5: MraW methylase family; InterPro: IPR002903 This is a family of S-adenosyl-L-methionine-dependent methyltransferases, which are found primarily, though not exclusively, in bacteria Back     alignment and domain information
>TIGR01444 fkbM_fam methyltransferase, FkbM family Back     alignment and domain information
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only] Back     alignment and domain information
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF05971 Methyltransf_10: Protein of unknown function (DUF890); InterPro: IPR010286 This family consists of several conserved hypothetical proteins from both eukaryotes and prokaryotes Back     alignment and domain information
>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins Back     alignment and domain information
>PF04445 SAM_MT: Putative SAM-dependent methyltransferase; InterPro: IPR007536 This family of proteins is functionally uncharacterised Back     alignment and domain information
>KOG3115 consensus Methyltransferase-like protein [General function prediction only] Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PF07091 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 3LCU_A 3LCV_B 3FRH_A 3FRI_A 3B89_A 3FZG_A Back     alignment and domain information
>PF13679 Methyltransf_32: Methyltransferase domain Back     alignment and domain information
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases Back     alignment and domain information
>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>KOG3987 consensus Uncharacterized conserved protein DREV/CGI-81 [Function unknown] Back     alignment and domain information
>KOG1253 consensus tRNA methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG3897 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1568 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] Back     alignment and domain information
>KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] Back     alignment and domain information
>KOG3201 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2187 consensus tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1122 consensus tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2) [RNA processing and modification] Back     alignment and domain information
>KOG2198 consensus tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes Back     alignment and domain information
>PRK09880 L-idonate 5-dehydrogenase; Provisional Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG1269 consensus SAM-dependent methyltransferases [Lipid transport and metabolism; General function prediction only] Back     alignment and domain information
>PF14314 Methyltrans_Mon: Virus-capping methyltransferase Back     alignment and domain information
>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00357 methyltransferase; Provisional Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 Back     alignment and domain information
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted Back     alignment and domain information
>KOG1596 consensus Fibrillarin and related nucleolar RNA-binding proteins [RNA processing and modification] Back     alignment and domain information
>PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms] Back     alignment and domain information
>KOG1099 consensus SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) Back     alignment and domain information
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 Back     alignment and domain information
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional Back     alignment and domain information
>KOG4058 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase Back     alignment and domain information
>cd08293 PTGR2 Prostaglandin reductase Back     alignment and domain information
>PRK05562 precorrin-2 dehydrogenase; Provisional Back     alignment and domain information
>KOG1501 consensus Arginine N-methyltransferase [General function prediction only] Back     alignment and domain information
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family Back     alignment and domain information
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase Back     alignment and domain information
>PF10354 DUF2431: Domain of unknown function (DUF2431); InterPro: IPR019446 This entry represents the N-terminal domain of a family of proteins whose function is not known Back     alignment and domain information
>KOG2671 consensus Putative RNA methylase [Replication, recombination and repair] Back     alignment and domain information
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like Back     alignment and domain information
>PF00145 DNA_methylase: C-5 cytosine-specific DNA methylase; InterPro: IPR001525 C-5 cytosine-specific DNA methylases (2 Back     alignment and domain information
>PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein Back     alignment and domain information
>KOG0821 consensus Predicted ribosomal RNA adenine dimethylase [RNA processing and modification] Back     alignment and domain information
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>PF05711 TylF: Macrocin-O-methyltransferase (TylF); InterPro: IPR008884 This family consists of bacterial macrocin O-methyltransferase (TylF) proteins Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases Back     alignment and domain information
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] Back     alignment and domain information
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only] Back     alignment and domain information
>PLN02740 Alcohol dehydrogenase-like Back     alignment and domain information
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>KOG2078 consensus tRNA modification enzyme [RNA processing and modification] Back     alignment and domain information
>cd05278 FDH_like Formaldehyde dehydrogenases Back     alignment and domain information
>COG4121 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK11524 putative methyltransferase; Provisional Back     alignment and domain information
>PLN02827 Alcohol dehydrogenase-like Back     alignment and domain information
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase Back     alignment and domain information
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>cd05285 sorbitol_DH Sorbitol dehydrogenase Back     alignment and domain information
>PHA01634 hypothetical protein Back     alignment and domain information
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase Back     alignment and domain information
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase Back     alignment and domain information
>cd08230 glucose_DH Glucose dehydrogenase Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>COG4798 Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>COG0270 Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] Back     alignment and domain information
>PLN03154 putative allyl alcohol dehydrogenase; Provisional Back     alignment and domain information
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase Back     alignment and domain information
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B Back     alignment and domain information
>PF06460 NSP13: Coronavirus NSP13; InterPro: IPR009461 This domain covers the NSP13 region of the coronavirus polyprotein Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase Back     alignment and domain information
>KOG2798 consensus Putative trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase Back     alignment and domain information
>TIGR00497 hsdM type I restriction system adenine methylase (hsdM) Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>TIGR00675 dcm DNA-methyltransferase (dcm) Back     alignment and domain information
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase Back     alignment and domain information
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases Back     alignment and domain information
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Back     alignment and domain information
>KOG2793 consensus Putative N2,N2-dimethylguanosine tRNA methyltransferase [RNA processing and modification] Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>cd08234 threonine_DH_like L-threonine dehydrogenase Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF10237 N6-adenineMlase: Probable N6-adenine methyltransferase; InterPro: IPR019369 This family of proteins, which are of approximately 200 residues in length, contain a highly conserved Glu-Phe-Trp (QFW) motif close to the N terminus and an Asp/Asn-Pro-Pro-Tyr/Phe motif in the centre Back     alignment and domain information
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>KOG1331 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK13699 putative methylase; Provisional Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] Back     alignment and domain information
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases Back     alignment and domain information
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>PF02636 Methyltransf_28: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR003788 This entry describes proteins of unknown function Back     alignment and domain information
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>PRK08618 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>PF11899 DUF3419: Protein of unknown function (DUF3419); InterPro: IPR021829 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PRK06141 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot Back     alignment and domain information
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases Back     alignment and domain information
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>cd05288 PGDH Prostaglandin dehydrogenases Back     alignment and domain information
>PF11312 DUF3115: Protein of unknown function (DUF3115); InterPro: IPR021463 This eukaryotic family of proteins has no known function Back     alignment and domain information
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4017 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PRK07340 ornithine cyclodeaminase; Validated Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>cd05281 TDH Threonine dehydrogenase Back     alignment and domain information
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members Back     alignment and domain information
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases Back     alignment and domain information
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00692 tdh L-threonine 3-dehydrogenase Back     alignment and domain information
>PRK06949 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK10083 putative oxidoreductase; Provisional Back     alignment and domain information
>COG1565 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK07523 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) Back     alignment and domain information
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated Back     alignment and domain information
>PRK07102 short chain dehydrogenase; Provisional Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PRK06124 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) Back     alignment and domain information
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family Back     alignment and domain information
>PRK08213 gluconate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
1xj5_A334 X-Ray Structure Of Spermidine Synthase From Arabido 1e-110
2pss_A321 The Structure Of Plasmodium Falciparum Spermidine S 2e-68
2pwp_A282 Crystal Structure Of Spermidine Synthase From Plasm 2e-68
2hte_A283 The Crystal Structure Of Spermidine Synthase From P 3e-68
2o05_A304 Human Spermidine Synthase Length = 304 1e-67
3rw9_A304 Crystal Structure Of Human Spermidine Synthase In C 1e-67
2b2c_A314 Cloning, Expression, Characterisation And Three- Di 3e-67
3bwb_A304 Crystal Structure Of The Apo Form Of Spermidine Syn 3e-57
1iy9_A275 Crystal Structure Of Spermidine Synthase Length = 2 3e-41
1jq3_A296 Crystal Structure Of Spermidine Synthase In Complex 1e-39
3o4f_A294 Crystal Structure Of Spermidine Synthase From E. Co 1e-38
3anx_A314 Crystal Structure Of TriamineAGMATINE AMINOPROPYLTR 2e-27
1uir_A314 Crystal Structure Of Polyamine Aminopropyltransfeas 5e-27
1mjf_A281 Putative Spermidine Synthetase From Pyrococcus Furi 3e-26
2e5w_A280 Crystal Structure Of Spermidine Synthase From Pyroc 3e-25
>pdb|1XJ5|A Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis Thaliana Gene At1g23820 Length = 334 Back     alignment and structure 
Iteration: 1

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/323 (58%), Positives = 235/323 (72%), Gaps = 34/323 (10%)
Query: 47  CHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKE 106
           C STV+ GWFSE               +P WP                  GEAHSLKV++
Sbjct: 39  CFSTVIPGWFSEX--------------SPXWP------------------GEAHSLKVEK 66
Query: 107 ILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXX 166
           +LF+GKS+YQ+V+VF+S  YGKVLVLDG++QLTE+DECAYQE I HLPLCSIP+PK    
Sbjct: 67  VLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEXITHLPLCSIPNPKKVLV 126
Query: 167 XXXXXXXXXREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEF 226
                    RE++RH S+E ID CEIDK V+DVSK++FP++A+G+EDPRV L IGD V F
Sbjct: 127 IGGGDGGVLREVARHASIEQIDXCEIDKXVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186
Query: 227 LRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIE 286
           L+    G YDA+IVDSSDP+GPA+EL EKPFF ++A+ALRPGGV+C  AES+WLH  +IE
Sbjct: 187 LKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHXDIIE 246
Query: 287 DMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHK 346
           D++S CRE FKGSV+YAW SVPTYPSG+IGF +CSTEGP VDF +P+NPI+  E + K  
Sbjct: 247 DIVSNCREIFKGSVNYAWTSVPTYPSGVIGFXLCSTEGPDVDFKHPLNPID--ESSSKSN 304
Query: 347 RELRFYNSEIHSAAFALPAFLKR 369
             L+FYN+EIHSAAF LP+F K+
Sbjct: 305 GPLKFYNAEIHSAAFCLPSFAKK 327
>pdb|2PSS|A Chain A, The Structure Of Plasmodium Falciparum Spermidine Synthase In Its Apo- Form Length = 321 Back     alignment and structure
>pdb|2PWP|A Chain A, Crystal Structure Of Spermidine Synthase From Plasmodium Falciparum In Complex With Spermidine Length = 282 Back     alignment and structure
>pdb|2HTE|A Chain A, The Crystal Structure Of Spermidine Synthase From P. Falciparum In Complex With 5'-Methylthioadenosine Length = 283 Back     alignment and structure
>pdb|2O05|A Chain A, Human Spermidine Synthase Length = 304 Back     alignment and structure
>pdb|3RW9|A Chain A, Crystal Structure Of Human Spermidine Synthase In Complex With Decarboxylated S-Adenosylhomocysteine Length = 304 Back     alignment and structure
>pdb|2B2C|A Chain A, Cloning, Expression, Characterisation And Three- Dimensional Structure Determination Of The Caenorhabditis Elegans Spermidine Synthase Length = 314 Back     alignment and structure
>pdb|3BWB|A Chain A, Crystal Structure Of The Apo Form Of Spermidine Synthase From Trypanosoma Cruzi At 2.5 A Resolution Length = 304 Back     alignment and structure
>pdb|1IY9|A Chain A, Crystal Structure Of Spermidine Synthase Length = 275 Back     alignment and structure
>pdb|1JQ3|A Chain A, Crystal Structure Of Spermidine Synthase In Complex With Transition State Analogue Adodato Length = 296 Back     alignment and structure
>pdb|3O4F|A Chain A, Crystal Structure Of Spermidine Synthase From E. Coli Length = 294 Back     alignment and structure
>pdb|3ANX|A Chain A, Crystal Structure Of TriamineAGMATINE AMINOPROPYLTRANSFERASE (SPEE) From Thermus Thermophilus, Complexed With Mta Length = 314 Back     alignment and structure
>pdb|1UIR|A Chain A, Crystal Structure Of Polyamine Aminopropyltransfease From Thermus Thermophilus Length = 314 Back     alignment and structure
>pdb|1MJF|A Chain A, Putative Spermidine Synthetase From Pyrococcus Furiosus Pfu- 132382 Length = 281 Back     alignment and structure
>pdb|2E5W|A Chain A, Crystal Structure Of Spermidine Synthase From Pyrococcus Horikoshii Ot3 Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
1xj5_A334 Spermidine synthase 1; structural genomics, protei 1e-162
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 1e-149
2pt6_A321 Spermidine synthase; transferase, structural genom 1e-148
2o07_A304 Spermidine synthase; structural genomics, structur 1e-146
2i7c_A283 Spermidine synthase; transferase, structural genom 1e-144
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 1e-143
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 1e-141
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 1e-141
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 1e-141
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 1e-133
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 1e-132
2cmg_A262 Spermidine synthase; transferase, putrescine amino 1e-107
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 3e-97
3gjy_A317 Spermidine synthase; APC62791, structural genomics 1e-51
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 2e-09
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 1e-08
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 3e-08
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 3e-07
2r3s_A335 Uncharacterized protein; methyltransferase domain, 1e-06
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 2e-06
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 2e-06
3dp7_A363 SAM-dependent methyltransferase; structural genomi 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 8e-06
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 9e-06
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 1e-05
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 1e-05
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 2e-05
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 2e-05
3ll7_A410 Putative methyltransferase; methytransferase, stru 2e-05
3dtn_A234 Putative methyltransferase MM_2633; structural gen 2e-05
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 2e-05
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 2e-05
3ocj_A305 Putative exported protein; structural genomics, PS 2e-05
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 3e-05
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 4e-05
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 4e-05
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 6e-05
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 6e-05
3bxo_A239 N,N-dimethyltransferase; desosamine, sugar, carboh 6e-05
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 8e-05
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 9e-05
3duw_A223 OMT, O-methyltransferase, putative; alternating of 9e-05
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 1e-04
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 1e-04
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 1e-04
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 2e-04
3f4k_A257 Putative methyltransferase; structural genomics, P 2e-04
3cbg_A232 O-methyltransferase; cyanobacterium; HET: SAH FER 2e-04
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 2e-04
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 2e-04
3hnr_A220 Probable methyltransferase BT9727_4108; structural 3e-04
3m33_A226 Uncharacterized protein; structural genomics, PSI- 3e-04
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 3e-04
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 3e-04
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 4e-04
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 4e-04
1wzn_A252 SAM-dependent methyltransferase; structural genomi 4e-04
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 4e-04
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 4e-04
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 5e-04
1sui_A247 Caffeoyl-COA O-methyltransferase; rossmann fold, p 5e-04
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 6e-04
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 9e-04
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Length = 334 Back     alignment and structure
 Score =  456 bits (1174), Expect = e-162
 Identities = 203/360 (56%), Positives = 260/360 (72%), Gaps = 34/360 (9%)

Query: 12  QKTMDGKESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMY 71
           ++T                +  ++      + +  C STV+ GWFSE             
Sbjct: 4   KETSATDLKRPREEDDNGGAATMETENGDQKKEPACFSTVIPGWFSEMS----------- 52

Query: 72  FNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLV 131
              PMWP                  GEAHSLKV+++LF+GKS+YQ+V+VF+S  YGKVLV
Sbjct: 53  ---PMWP------------------GEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLV 91

Query: 132 LDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICE 191
           LDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+GGGDGGVLRE++RH S+E ID+CE
Sbjct: 92  LDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCE 151

Query: 192 IDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQE 251
           IDKMV+DVSK++FP++A+G+EDPRV L IGD V FL+    G YDA+IVDSSDP+GPA+E
Sbjct: 152 IDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKE 211

Query: 252 LVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYP 311
           L EKPFF ++A+ALRPGGV+C  AES+WLH  +IED++S CRE FKGSV+YAW SVPTYP
Sbjct: 212 LFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYP 271

Query: 312 SGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREV 371
           SG+IGF++CSTEGP VDF +P+NPI+  E + K    L+FYN+EIHSAAF LP+F K+ +
Sbjct: 272 SGVIGFMLCSTEGPDVDFKHPLNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVI 329
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Length = 314 Back     alignment and structure
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Length = 321 Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Length = 304 Back     alignment and structure
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Length = 283 Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Length = 304 Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Length = 275 Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Length = 296 Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Length = 281 Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Length = 314 Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Length = 262 Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Length = 317 Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Length = 236 Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Length = 217 Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Length = 221 Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Length = 232 Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Length = 335 Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Length = 218 Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Length = 254 Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Length = 363 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Length = 233 Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Length = 375 Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Length = 194 Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 195 Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Length = 266 Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Length = 227 Back     alignment and structure
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} Length = 410 Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Length = 234 Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Length = 210 Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Length = 950 Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Length = 305 Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Length = 352 Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Length = 297 Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Length = 256 Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Length = 243 Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Length = 248 Back     alignment and structure
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} Length = 239 Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Length = 241 Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Length = 219 Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Length = 223 Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Length = 267 Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Length = 203 Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Length = 299 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298 Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Length = 257 Back     alignment and structure
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} Length = 232 Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Length = 334 Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* Length = 312 Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Length = 220 Back     alignment and structure
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Length = 226 Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} Length = 225 Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Length = 246 Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Length = 237 Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Length = 369 Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Length = 252 Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Length = 209 Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Length = 374 Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Length = 211 Back     alignment and structure
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* Length = 247 Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Length = 273 Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
3o4f_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
3adn_A294 Spermidine synthase; aminopropyltransferase, polya 100.0
1xj5_A334 Spermidine synthase 1; structural genomics, protei 100.0
2i7c_A283 Spermidine synthase; transferase, structural genom 100.0
2b2c_A314 Spermidine synthase; beta-alpha, transferase; 2.50 100.0
2o07_A304 Spermidine synthase; structural genomics, structur 100.0
1iy9_A275 Spermidine synthase; rossmann fold, structural gen 100.0
1inl_A296 Spermidine synthase; beta-barrel, rossman fold, st 100.0
2pt6_A321 Spermidine synthase; transferase, structural genom 100.0
3bwc_A304 Spermidine synthase; SAM, SGPP, structura genomics 100.0
1uir_A314 Polyamine aminopropyltransferase; spermidien synth 100.0
1mjf_A281 Spermidine synthase; spermidine synthetase, struct 100.0
2cmg_A262 Spermidine synthase; transferase, putrescine amino 100.0
3c6k_A381 Spermine synthase; spermidine aminopropyltransfera 100.0
2qfm_A364 Spermine synthase; spermidine aminopropyltransfera 100.0
3gjy_A317 Spermidine synthase; APC62791, structural genomics 100.0
3duw_A223 OMT, O-methyltransferase, putative; alternating of 99.56
3tfw_A248 Putative O-methyltransferase; PSI-biology, nysgrc, 99.55
3orh_A236 Guanidinoacetate N-methyltransferase; structura ge 99.55
3c3y_A237 Pfomt, O-methyltransferase; plant secondary metabo 99.55
3p9n_A189 Possible methyltransferase (methylase); RV2966C, a 99.54
1sui_A247 Caffeoyl-COA O-methyltransferase; rossmann fold, p 99.53
3ntv_A232 MW1564 protein; rossmann fold, putative methyltran 99.53
3dr5_A221 Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 99.53
3c3p_A210 Methyltransferase; NP_951602.1, structural genomic 99.51
3dxy_A218 TRNA (guanine-N(7)-)-methyltransferase; rossmann f 99.51
1yzh_A214 TRNA (guanine-N(7)-)-methyltransferase; alpha-beta 99.5
2fca_A213 TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac 99.49
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 99.48
3r3h_A242 O-methyltransferase, SAM-dependent; structural gen 99.48
3tr6_A225 O-methyltransferase; cellular processes; HET: SAH; 99.47
2avd_A229 Catechol-O-methyltransferase; structural genomics, 99.45
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 99.44
2ozv_A260 Hypothetical protein ATU0636; structural genomics, 99.44
1zx0_A236 Guanidinoacetate N-methyltransferase; structural g 99.43
3u81_A221 Catechol O-methyltransferase; neurotransmitter deg 99.43
3ckk_A235 TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- 99.42
3cbg_A232 O-methyltransferase; cyanobacterium; HET: SAH FER 99.42
3lpm_A259 Putative methyltransferase; structural genomics, p 99.42
3e05_A204 Precorrin-6Y C5,15-methyltransferase (decarboxyla; 99.42
2ift_A201 Putative methylase HI0767; NESG, Y767_haein, struc 99.41
2hnk_A239 SAM-dependent O-methyltransferase; modified rossma 99.41
3mti_A185 RRNA methylase; SAM-dependent, PSI, MCSG, structur 99.41
3hm2_A178 Precorrin-6Y C5,15-methyltransferase; alpha-beta-s 99.4
4hg2_A257 Methyltransferase type 11; structural genomics, PS 99.4
2igt_A332 SAM dependent methyltransferase; alpha-beta sandwi 99.39
2frn_A278 Hypothetical protein PH0793; structural genomics, 99.38
2fhp_A187 Methylase, putative; alpha-beta-alpha sandwich, st 99.38
2esr_A177 Methyltransferase; structural genomics, hypothetic 99.38
3fpf_A298 Mtnas, putative uncharacterized protein; thermonic 99.37
1xdz_A240 Methyltransferase GIDB; MCSG, protein structure in 99.37
2vdv_E246 TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl 99.36
2fpo_A202 Methylase YHHF; structural genomics, putative meth 99.36
3njr_A204 Precorrin-6Y methylase; methyltransferase, decarbo 99.35
3eey_A197 Putative rRNA methylase; rRNA methylation, S-adeno 99.35
2gpy_A233 O-methyltransferase; structural genomics, PSI, pro 99.35
3f4k_A257 Putative methyltransferase; structural genomics, P 99.35
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 99.35
4dzr_A215 Protein-(glutamine-N5) methyltransferase, release 99.35
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 99.34
3evz_A230 Methyltransferase; NYSGXRC, NEW YORK SGX research 99.34
3dtn_A234 Putative methyltransferase MM_2633; structural gen 99.33
3g89_A249 Ribosomal RNA small subunit methyltransferase G; 1 99.33
2b78_A385 Hypothetical protein SMU.776; structure genomics, 99.32
3mb5_A255 SAM-dependent methyltransferase; RNA methyltransfe 99.32
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 99.32
1ws6_A171 Methyltransferase; structural genomics, riken stru 99.32
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 99.3
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 99.29
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 99.29
1vl5_A260 Unknown conserved protein BH2331; putative methylt 99.28
2b3t_A276 Protein methyltransferase HEMK; translation termin 99.28
1pjz_A203 Thiopurine S-methyltransferase; polymorphism, S-ad 99.28
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 99.28
3lbf_A210 Protein-L-isoaspartate O-methyltransferase; modifi 99.28
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 99.28
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 99.28
1nt2_A210 Fibrillarin-like PRE-rRNA processing protein; adeM 99.27
1g8a_A227 Fibrillarin-like PRE-rRNA processing protein; rRNA 99.27
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 99.27
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 99.27
1jsx_A207 Glucose-inhibited division protein B; methyltransf 99.27
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 99.27
2bm8_A236 Cephalosporin hydroxylase CMCI; cephamycin biosynt 99.27
1l3i_A192 Precorrin-6Y methyltransferase/putative decarboxyl 99.26
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 99.26
3g07_A292 7SK snRNA methylphosphate capping enzyme; structur 99.26
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 99.26
2gb4_A252 Thiopurine S-methyltransferase; 18204406, thiopuri 99.26
3a27_A272 TYW2, uncharacterized protein MJ1557; wybutosine m 99.25
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 99.25
2b25_A336 Hypothetical protein; structural genomics, methyl 99.25
3dh0_A219 SAM dependent methyltransferase; cystal structure, 99.25
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 99.24
3grz_A205 L11 mtase, ribosomal protein L11 methyltransferase 99.24
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 99.24
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 99.24
3hnr_A220 Probable methyltransferase BT9727_4108; structural 99.24
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 99.24
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 99.24
3gu3_A284 Methyltransferase; alpha-beta protein, structural 99.23
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 99.23
3g5t_A299 Trans-aconitate 3-methyltransferase; structural ge 99.23
3dmg_A381 Probable ribosomal RNA small subunit methyltransf; 99.23
2p7i_A250 Hypothetical protein; putative methyltransferase, 99.23
4dmg_A393 Putative uncharacterized protein TTHA1493; rRNA, m 99.22
3k6r_A278 Putative transferase PH0793; structural genomics, 99.22
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 99.22
1fbn_A230 MJ fibrillarin homologue; MJ proteins, ribosomal R 99.22
1nv8_A284 HEMK protein; class I adoMet-dependent methyltrans 99.22
2nxc_A254 L11 mtase, ribosomal protein L11 methyltransferase 99.21
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 99.21
3lcc_A235 Putative methyl chloride transferase; halide methy 99.21
1xxl_A239 YCGJ protein; structural genomics, protein structu 99.21
2pxx_A215 Uncharacterized protein MGC2408; structural genomi 99.21
3i9f_A170 Putative type 11 methyltransferase; structural gen 99.21
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 99.21
3ocj_A305 Putative exported protein; structural genomics, PS 99.2
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 99.2
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 99.2
2yvl_A248 TRMI protein, hypothetical protein; tRNA, methyltr 99.2
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 99.2
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 99.2
1o54_A277 SAM-dependent O-methyltransferase; TM0748, structu 99.2
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 99.2
3c0k_A396 UPF0064 protein YCCW; PUA domain, adoMet dependent 99.2
2as0_A396 Hypothetical protein PH1915; RNA methyltransferase 99.19
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 99.19
1wxx_A382 TT1595, hypothetical protein TTHA1280; thermus the 99.19
2pwy_A258 TRNA (adenine-N(1)-)-methyltransferase; mtase, ado 99.19
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 99.19
3m70_A286 Tellurite resistance protein TEHB homolog; structu 99.19
3ggd_A245 SAM-dependent methyltransferase; YP_325210.1, stru 99.19
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 99.18
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 99.18
4fsd_A383 Arsenic methyltransferase; rossmann fold; 1.75A {C 99.18
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 99.18
3q7e_A349 Protein arginine N-methyltransferase 1; HET: SAH; 99.18
1yb2_A275 Hypothetical protein TA0852; structural genomics, 99.18
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 99.17
2pjd_A343 Ribosomal RNA small subunit methyltransferase C; g 99.17
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 99.17
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 99.17
1wzn_A252 SAM-dependent methyltransferase; structural genomi 99.17
4df3_A233 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.16
1dl5_A317 Protein-L-isoaspartate O-methyltransferase; isoasp 99.16
3tma_A354 Methyltransferase; thump domain; 2.05A {Thermus th 99.16
2qm3_A373 Predicted methyltransferase; putative methyltransf 99.16
3r0q_C376 Probable protein arginine N-methyltransferase 4.2; 99.16
2yxe_A215 Protein-L-isoaspartate O-methyltransferase; rossma 99.16
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 99.15
2kw5_A202 SLR1183 protein; structural genomics, northeast st 99.15
3ajd_A274 Putative methyltransferase MJ0026; tRNA, M5C, ross 99.15
1ri5_A298 MRNA capping enzyme; methyltransferase, M7G, messe 99.15
2yx1_A336 Hypothetical protein MJ0883; methyl transferase, t 99.15
2ipx_A233 RRNA 2'-O-methyltransferase fibrillarin; FBL, stru 99.15
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 99.15
3v97_A703 Ribosomal RNA large subunit methyltransferase L; Y 99.14
1i9g_A280 Hypothetical protein RV2118C; mtase, adoMet, cryst 99.14
1vbf_A231 231AA long hypothetical protein-L-isoaspartate O- 99.13
2fyt_A340 Protein arginine N-methyltransferase 3; structural 99.13
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 99.13
3gdh_A241 Trimethylguanosine synthase homolog; M7G, CAP, dim 99.13
1i1n_A226 Protein-L-isoaspartate O-methyltransferase; S-aden 99.13
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 99.12
3kr9_A225 SAM-dependent methyltransferase; class I rossmann- 99.12
3bxo_A239 N,N-dimethyltransferase; desosamine, sugar, carboh 99.11
3m33_A226 Uncharacterized protein; structural genomics, PSI- 99.11
2pbf_A227 Protein-L-isoaspartate O-methyltransferase beta-A 99.11
1o9g_A250 RRNA methyltransferase; antibiotic resistance, Se- 99.11
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 99.1
3uwp_A438 Histone-lysine N-methyltransferase, H3 lysine-79; 99.1
1jg1_A235 PIMT;, protein-L-isoaspartate O-methyltransferase; 99.1
1r18_A227 Protein-L-isoaspartate(D-aspartate)-O-methyltrans; 99.1
1wy7_A207 Hypothetical protein PH1948; seven-stranded beta s 99.1
3dou_A191 Ribosomal RNA large subunit methyltransferase J; c 99.1
1ej0_A180 FTSJ; methyltransferase, adoMet, adenosyl methioni 99.1
2h00_A254 Methyltransferase 10 domain containing protein; st 99.09
2gs9_A211 Hypothetical protein TT1324; methyl transferase, s 99.08
1ne2_A200 Hypothetical protein TA1320; structural genomics, 99.08
3gnl_A244 Uncharacterized protein, DUF633, LMOF2365_1472; st 99.08
3bgv_A313 MRNA CAP guanine-N7 methyltransferase; alternative 99.08
2avn_A260 Ubiquinone/menaquinone biosynthesis methyltransfe 99.07
3id6_C232 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 99.07
3lec_A230 NADB-rossmann superfamily protein; PSI, MCSG, stru 99.07
3q87_B170 N6 adenine specific DNA methylase; SAM-methyltrans 99.07
3p2e_A225 16S rRNA methylase; methyltransferase, transferase 99.07
3fzg_A200 16S rRNA methylase; methyltransferase, plasmid, tr 99.07
2qy6_A257 UPF0209 protein YFCK; structural genomics, unknown 99.07
1g6q_1328 HnRNP arginine N-methyltransferase; SAM-binding do 99.07
3cc8_A230 Putative methyltransferase; structural genomics, j 99.07
1ixk_A315 Methyltransferase; open beta sheet; 1.90A {Pyrococ 99.06
3dp7_A363 SAM-dependent methyltransferase; structural genomi 99.06
2y1w_A348 Histone-arginine methyltransferase CARM1; histone 99.06
2plw_A201 Ribosomal RNA methyltransferase, putative; malaria 99.05
4hc4_A376 Protein arginine N-methyltransferase 6; HRMT1L6, S 99.05
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 99.05
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 99.05
3iv6_A261 Putative Zn-dependent alcohol dehydrogenase; alpha 99.04
1u2z_A433 Histone-lysine N-methyltransferase, H3 lysine-79 s 99.04
3ege_A261 Putative methyltransferase from antibiotic biosyn 99.03
3mq2_A218 16S rRNA methyltransferase; methyltranferase, ribo 99.01
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 99.01
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 99.01
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 99.0
1p91_A269 Ribosomal RNA large subunit methyltransferase A; R 99.0
2dul_A 378 N(2),N(2)-dimethylguanosine tRNA methyltransferas; 98.99
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 98.99
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 98.99
3m6w_A 464 RRNA methylase; rRNA methyltransferase, 5-methylcy 98.98
2i62_A265 Nicotinamide N-methyltransferase; structural genom 98.98
2a14_A263 Indolethylamine N-methyltransferase; SGC,INMT, str 98.98
2nyu_A196 Putative ribosomal RNA methyltransferase 2; SAM, s 98.97
3axs_A 392 Probable N(2),N(2)-dimethylguanosine tRNA methylt 98.97
2ih2_A 421 Modification methylase TAQI; DNA, DNA methyltransf 98.97
3hp7_A291 Hemolysin, putative; structural genomics, APC64019 98.97
1tw3_A360 COMT, carminomycin 4-O-methyltransferase; anthracy 98.97
1sqg_A429 SUN protein, FMU protein; rossmann-fold, mixed bet 98.96
3m4x_A 456 NOL1/NOP2/SUN family protein; mtase domain, PUA do 98.94
2r3s_A335 Uncharacterized protein; methyltransferase domain, 98.94
3bt7_A369 TRNA (uracil-5-)-methyltransferase; methyluridine, 98.94
2f8l_A344 Hypothetical protein LMO1582; structural genomics, 98.94
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 98.92
2yxl_A450 PH0851 protein, 450AA long hypothetical FMU protei 98.92
2g72_A289 Phenylethanolamine N-methyltransferase; HET: SAM F 98.92
2frx_A 479 Hypothetical protein YEBU; rossmann-type S-adenosy 98.91
3sso_A419 Methyltransferase; macrolide, natural product, ros 98.91
3bzb_A281 Uncharacterized protein; RED ALGA, protein structu 98.9
3b3j_A 480 Histone-arginine methyltransferase CARM1; protein 98.9
3tm4_A373 TRNA (guanine N2-)-methyltransferase TRM14; rossma 98.89
2wa2_A276 Non-structural protein 5; transferase, S-adenosyl- 98.88
1vlm_A219 SAM-dependent methyltransferase; possible histamin 98.88
3cvo_A202 Methyltransferase-like protein of unknown functio; 98.87
4e2x_A416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 98.86
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 98.86
2oxt_A265 Nucleoside-2'-O-methyltransferase; flavivirus, vir 98.84
1uwv_A433 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m 98.83
3lst_A348 CALO1 methyltransferase; calicheamicin, enediyne, 98.83
3opn_A232 Putative hemolysin; structural genomics, PSI-2, pr 98.82
1zq9_A285 Probable dimethyladenosine transferase; SGC, struc 98.81
2jjq_A425 Uncharacterized RNA methyltransferase pyrab10780; 98.8
4a6d_A353 Hydroxyindole O-methyltransferase; melatonin, circ 98.8
3lcv_B281 Sisomicin-gentamicin resistance methylase SGM; ant 98.79
2p41_A305 Type II methyltransferase; vizier, viral enzymes i 98.77
3giw_A277 Protein of unknown function DUF574; rossmann-fold 98.77
3gru_A295 Dimethyladenosine transferase; rossman fold, ribos 98.75
3reo_A368 (ISO)eugenol O-methyltransferase; directed evoluti 98.74
3ldu_A385 Putative methylase; structural genomics, PSI-2, pr 98.71
2zfu_A215 Nucleomethylin, cerebral protein 1; nucleolar prot 98.71
3p9c_A364 Caffeic acid O-methyltransferase; S-adenosylmethio 98.71
1fp1_D372 Isoliquiritigenin 2'-O-methyltransferase; protein- 98.71
2xyq_A290 Putative 2'-O-methyl transferase; transferase-vira 98.7
1m6y_A301 S-adenosyl-methyltransferase MRAW; SAM-dependent m 98.7
3ldg_A384 Putative uncharacterized protein SMU.472; YPSC, me 98.7
1fp2_A352 Isoflavone O-methyltransferase; protein-product co 98.7
1af7_A274 Chemotaxis receptor methyltransferase CHER; chemot 98.69
3k0b_A393 Predicted N6-adenine-specific DNA methylase; methy 98.69
4azs_A 569 Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 98.69
3fut_A271 Dimethyladenosine transferase; methyltransferase, 98.67
3ll7_A410 Putative methyltransferase; methytransferase, stru 98.65
2b9e_A309 NOL1/NOP2/SUN domain family, member 5 isoform 2; m 98.65
2h1r_A299 Dimethyladenosine transferase, putative; SGC toron 98.65
2okc_A445 Type I restriction enzyme stysji M protein; NP_813 98.63
2r6z_A258 UPF0341 protein in RSP 3' region; alpha-beta prote 98.63
3tqs_A255 Ribosomal RNA small subunit methyltransferase A; p 98.61
3frh_A253 16S rRNA methylase; methyltransferase domain, heli 98.61
2wk1_A282 NOVP; transferase, O-methyltransferase, novobiocin 98.56
1qam_A244 ERMC' methyltransferase; rRNA methyltransferase ER 98.55
2oyr_A258 UPF0341 protein YHIQ; alpha-beta protein, structur 98.54
1zg3_A358 Isoflavanone 4'-O-methyltransferase; rossman fold, 98.52
3ftd_A249 Dimethyladenosine transferase; KSGA, rossmann-like 98.51
1yub_A245 Ermam, rRNA methyltransferase; MLS antibiotics; NM 98.5
3vyw_A308 MNMC2; tRNA wobble uridine, modification enzyme, g 98.5
2ld4_A176 Anamorsin; methyltransferase-like fold, alpha/beta 98.46
3khk_A544 Type I restriction-modification system methylation 98.46
3v97_A 703 Ribosomal RNA large subunit methyltransferase L; Y 98.41
2ar0_A 541 M.ecoki, type I restriction enzyme ecoki M protein 98.4
3lkd_A542 Type I restriction-modification system methyltrans 98.38
4fzv_A359 Putative methyltransferase NSUN4; mterf fold, meth 98.38
2oo3_A283 Protein involved in catabolism of external DNA; st 98.35
3s1s_A 878 Restriction endonuclease bpusi; PD--(D/E)XK cataly 98.32
3uzu_A279 Ribosomal RNA small subunit methyltransferase A; s 98.25
1qyr_A252 KSGA, high level kasugamycin resistance protein, S 98.25
3evf_A277 RNA-directed RNA polymerase NS5; NS5 methyltransfe 98.23
4gqb_A637 Protein arginine N-methyltransferase 5; TIM barrel 98.18
3gcz_A282 Polyprotein; flavivirus, RNA capping, methyltransf 98.12
1wg8_A285 Predicted S-adenosylmethionine-dependent methyltra 98.1
3ua3_A745 Protein arginine N-methyltransferase 5; TIM-barrel 98.08
3eld_A300 Methyltransferase; flavivirus, RNA capping, guanyl 97.94
3ps9_A 676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.83
3pvc_A 689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 97.74
2px2_A269 Genome polyprotein [contains: capsid protein C (co 97.61
3r24_A344 NSP16, 2'-O-methyl transferase; methyltransferase, 97.51
4auk_A375 Ribosomal RNA large subunit methyltransferase M; Y 97.51
3ufb_A530 Type I restriction-modification system methyltran 97.47
3p8z_A267 Mtase, non-structural protein 5; methyltransferase 97.46
1i4w_A353 Mitochondrial replication protein MTF1; mitochondr 97.42
3tos_A257 CALS11; methyltransferase, calicheamicin, structur 97.39
3lkz_A321 Non-structural protein 5; flavivirus, methyltransf 97.27
3tka_A347 Ribosomal RNA small subunit methyltransferase H; H 97.24
1g55_A 343 DNA cytosine methyltransferase DNMT2; human DNA me 97.08
2efj_A384 3,7-dimethylxanthine methyltransferase; SAM-depend 97.07
3b5i_A374 S-adenosyl-L-methionine:salicylic acid carboxyl me 97.06
2k4m_A153 TR8_protein, UPF0146 protein MTH_1000; alpha+beta, 96.82
2zig_A297 TTHA0409, putative modification methylase; methylt 96.78
1f8f_A371 Benzyl alcohol dehydrogenase; rossmann fold, oxido 96.7
1m6e_X359 S-adenosyl-L-methionnine:salicylic acid carboxyl m 96.69
2c7p_A327 Modification methylase HHAI; DNA methyltransferase 96.68
3g7u_A 376 Cytosine-specific methyltransferase; DNA-binding, 96.57
3m6i_A363 L-arabinitol 4-dehydrogenase; medium chain dehydro 96.47
1pl8_A356 Human sorbitol dehydrogenase; NAD, oxidoreductase; 96.46
4ej6_A370 Putative zinc-binding dehydrogenase; structural ge 96.45
3fpc_A352 NADP-dependent alcohol dehydrogenase; oxydoreducta 96.32
3s2e_A340 Zinc-containing alcohol dehydrogenase superfamily; 96.32
1boo_A 323 Protein (N-4 cytosine-specific methyltransferase P 96.3
3uko_A378 Alcohol dehydrogenase class-3; alcohol dehydrogena 96.1
4h0n_A333 DNMT2; SAH binding, transferase; HET: SAH; 2.71A { 96.06
1eg2_A 319 Modification methylase RSRI; rossmann fold, exocyc 96.0
4eez_A348 Alcohol dehydrogenase 1; site-saturation mutagenes 95.88
2dph_A398 Formaldehyde dismutase; dismutation of aldehydes, 95.85
1cdo_A374 Alcohol dehydrogenase; oxidoreductase, oxidoreduct 95.83
2b5w_A357 Glucose dehydrogenase; nucleotide binding motif, o 95.82
1g60_A260 Adenine-specific methyltransferase MBOIIA; structu 95.8
2jhf_A374 Alcohol dehydrogenase E chain; oxidoreductase, met 95.75
1p0f_A373 NADP-dependent alcohol dehydrogenase; ADH topology 95.74
3jv7_A345 ADH-A; dehydrogenase, nucleotide binding, rossmann 95.7
2fzw_A373 Alcohol dehydrogenase class III CHI chain; S-nitro 95.69
1e3i_A376 Alcohol dehydrogenase, class II; HET: NAD; 2.08A { 95.66
2zig_A297 TTHA0409, putative modification methylase; methylt 95.59
1e3j_A352 NADP(H)-dependent ketose reductase; oxidoreductase 95.57
3ip1_A404 Alcohol dehydrogenase, zinc-containing; structural 95.57
1pqw_A198 Polyketide synthase; rossmann fold, dimer, structu 95.54
3ubt_Y 331 Modification methylase HAEIII; protein-DNA complex 95.54
4dvj_A363 Putative zinc-dependent alcohol dehydrogenase Pro; 95.52
1g60_A260 Adenine-specific methyltransferase MBOIIA; structu 95.45
4b7c_A336 Probable oxidoreductase; NADP cofactor, rossmann f 95.38
3qv2_A327 5-cytosine DNA methyltransferase; DNMT2, ehmeth; H 95.37
1vj0_A380 Alcohol dehydrogenase, zinc-containing; TM0436, st 95.26
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 95.26
2d8a_A348 PH0655, probable L-threonine 3-dehydrogenase; pyro 95.19
2dq4_A343 L-threonine 3-dehydrogenase; NAD-dependent, oxidor 95.15
1kol_A398 Formaldehyde dehydrogenase; oxidoreductase; HET: N 95.08
4a2c_A346 Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc 94.99
3fbg_A346 Putative arginate lyase; structural genomics, unkn 94.93
1v3u_A333 Leukotriene B4 12- hydroxydehydrogenase/prostaglan 94.93
1uuf_A369 YAHK, zinc-type alcohol dehydrogenase-like protein 94.82
1rjw_A339 ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD 94.8
2c0c_A362 Zinc binding alcohol dehydrogenase, domain contain 94.76
2h6e_A344 ADH-4, D-arabinose 1-dehydrogenase; rossman fold, 94.75
3uog_A363 Alcohol dehydrogenase; structural genomics, protei 94.73
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 94.71
4eye_A342 Probable oxidoreductase; structural genomics, niai 94.51
2hcy_A347 Alcohol dehydrogenase 1; tetramer of asymmetric di 94.44
3me5_A 482 Cytosine-specific methyltransferase; structural ge 94.43
2j3h_A345 NADP-dependent oxidoreductase P1; double bond redu 94.42
3gms_A340 Putative NADPH:quinone reductase; structural genom 94.35
3two_A348 Mannitol dehydrogenase; cinnamyl-alcohol dehydroge 94.32
3qwb_A334 Probable quinone oxidoreductase; rossmann fold, qu 94.3
2zb4_A357 Prostaglandin reductase 2; rossmann fold, alternat 94.24
3jyn_A325 Quinone oxidoreductase; rossmann fold, protein-NAD 94.02
1id1_A153 Putative potassium channel protein; RCK domain, E. 94.01
4dup_A353 Quinone oxidoreductase; PSI-biology, structural ge 93.92
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 93.92
1jvb_A347 NAD(H)-dependent alcohol dehydrogenase; archaeon, 93.89
3gaz_A343 Alcohol dehydrogenase superfamily protein; oxidore 93.69
2eih_A343 Alcohol dehydrogenase; zinc ION binding protein, s 93.61
3l9w_A 413 Glutathione-regulated potassium-efflux system Pro 93.59
2qrv_A295 DNA (cytosine-5)-methyltransferase 3A; DNA methylt 93.49
3swr_A 1002 DNA (cytosine-5)-methyltransferase 1; epigenetics, 93.36
3c85_A183 Putative glutathione-regulated potassium-efflux S 93.35
1wly_A333 CAAR, 2-haloacrylate reductase; NADPH-dependent ox 93.17
3gqv_A371 Enoyl reductase; medium-chain reductase (MDR super 93.08
1yqd_A366 Sinapyl alcohol dehydrogenase; lignin, monolignol, 93.06
1yb5_A351 Quinone oxidoreductase; medium-chain dehydrogenase 92.98
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 92.97
2cdc_A366 Glucose dehydrogenase glucose 1-dehydrogenase, DHG 92.77
3goh_A315 Alcohol dehydrogenase, zinc-containing; NP_718042. 92.76
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 92.74
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 92.67
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 92.55
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 92.53
3nx4_A324 Putative oxidoreductase; csgid, structural genomic 92.51
2cf5_A357 Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign 92.51
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 92.44
2j8z_A354 Quinone oxidoreductase; medium-chain dehydrogenase 92.39
1qor_A327 Quinone oxidoreductase; HET: NAP; 2.20A {Escherich 92.36
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 92.34
1piw_A360 Hypothetical zinc-type alcohol dehydrogenase- like 92.33
1iz0_A302 Quinone oxidoreductase; APO-enzyme, riken structur 92.26
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 92.23
1boo_A323 Protein (N-4 cytosine-specific methyltransferase P 91.91
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 91.64
1lss_A140 TRK system potassium uptake protein TRKA homolog; 91.36
3k96_A 356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 91.03
2py6_A409 Methyltransferase FKBM; YP_546752.1, structural ge 90.92
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 90.86
3krt_A456 Crotonyl COA reductase; structural genomics, prote 90.8
1xa0_A328 Putative NADPH dependent oxidoreductases; structur 90.76
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 90.66
2y0c_A 478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 90.57
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 90.55
3iht_A174 S-adenosyl-L-methionine methyl transferase; YP_165 90.51
4a0s_A447 Octenoyl-COA reductase/carboxylase; oxidoreductase 90.26
3gg2_A 450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 90.24
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 90.01
2o3j_A 481 UDP-glucose 6-dehydrogenase; structural genomics, 89.99
3oig_A266 Enoyl-[acyl-carrier-protein] reductase [NADH]; fat 89.67
1tt7_A330 YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st 89.37
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 89.22
4a27_A349 Synaptic vesicle membrane protein VAT-1 homolog-L; 89.16
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 89.08
3av4_A 1330 DNA (cytosine-5)-methyltransferase 1; CXXC-type zi 88.93
3h7a_A252 Short chain dehydrogenase; oxidoreductase, PSI-2, 88.85
3grk_A293 Enoyl-(acyl-carrier-protein) reductase (NADH); ssg 88.72
1wma_A276 Carbonyl reductase [NADPH] 1; oxidoreductase; HET: 88.69
3lyl_A247 3-oxoacyl-(acyl-carrier-protein) reductase; alpha 88.63
4a7p_A 446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 88.59
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 88.58
1zcj_A 463 Peroxisomal bifunctional enzyme; peroxisomal multi 88.57
2vn8_A375 Reticulon-4-interacting protein 1; mitochondrion, 88.57
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 88.1
3o38_A266 Short chain dehydrogenase; tuberculosis, ortholog 87.72
3imf_A257 Short chain dehydrogenase; structural genomics, in 87.55
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 87.4
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 87.3
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 87.21
3tjr_A301 Short chain dehydrogenase; structural genomics, se 86.95
3sju_A279 Keto reductase; short-chain dehydrogenase, oxidore 86.89
1lnq_A336 MTHK channels, potassium channel related protein; 86.8
3ijr_A291 Oxidoreductase, short chain dehydrogenase/reducta; 86.79
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 86.61
4e21_A 358 6-phosphogluconate dehydrogenase (decarboxylating; 86.6
1eg2_A319 Modification methylase RSRI; rossmann fold, exocyc 86.54
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 86.44
4ft4_B 784 DNA (cytosine-5)-methyltransferase 1; chromodomain 86.43
4g65_A461 TRK system potassium uptake protein TRKA; structur 86.35
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 86.33
3hdj_A313 Probable ornithine cyclodeaminase; APC62486, borde 86.31
3guy_A230 Short-chain dehydrogenase/reductase SDR; structura 86.11
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 86.06
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 85.91
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 85.88
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 85.87
3v2g_A271 3-oxoacyl-[acyl-carrier-protein] reductase; struct 85.81
3tqh_A321 Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella 85.76
3o26_A311 Salutaridine reductase; short chain dehydrogenase/ 85.73
4dkj_A 403 Cytosine-specific methyltransferase; CG-specificit 85.71
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 85.71
3pxx_A287 Carveol dehydrogenase; structural genomics, seattl 85.45
3rkr_A262 Short chain oxidoreductase; rossmann fold; HET: NA 85.29
3cea_A 346 MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore 85.27
3f1l_A252 Uncharacterized oxidoreductase YCIK; E. coli, NADP 85.06
2q3e_A 467 UDP-glucose 6-dehydrogenase; hexamer, structural g 84.88
3eod_A130 Protein HNR; response regulator, phosphoprotein, t 84.8
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 84.77
3ucx_A264 Short chain dehydrogenase; ssgcid, seattle structu 84.68
3r1i_A276 Short-chain type dehydrogenase/reductase; structur 84.67
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 84.6
3mog_A 483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 84.49
1rjd_A334 PPM1P, carboxy methyl transferase for protein phos 84.44
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 84.43
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 84.43
3l77_A235 Short-chain alcohol dehydrogenase; oxidoreductase; 84.37
4hkt_A 331 Inositol 2-dehydrogenase; structural genomics, nys 84.36
2xxj_A310 L-LDH, L-lactate dehydrogenase; oxidoreductase, hy 84.3
4e6p_A259 Probable sorbitol dehydrogenase (L-iditol 2-dehyd; 84.24
2ae2_A260 Protein (tropinone reductase-II); oxidoreductase, 84.23
1yb1_A272 17-beta-hydroxysteroid dehydrogenase type XI; shor 84.22
3dqp_A219 Oxidoreductase YLBE; alpha-beta protein., structur 83.75
3ioy_A319 Short-chain dehydrogenase/reductase SDR; structura 83.64
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 83.62
4g65_A 461 TRK system potassium uptake protein TRKA; structur 83.55
2rhc_B277 Actinorhodin polyketide ketoreductase; oxidoreduct 83.48
2uyo_A310 Hypothetical protein ML2640; putative methyltransf 83.47
3pk0_A262 Short-chain dehydrogenase/reductase SDR; ssgcid, s 83.46
1h2b_A359 Alcohol dehydrogenase; oxidoreductase, archaea, hy 83.44
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 83.43
3i1j_A247 Oxidoreductase, short chain dehydrogenase/reducta; 83.29
4fn4_A254 Short chain dehydrogenase; NADH-binding, rossmann 83.26
3u5t_A267 3-oxoacyl-[acyl-carrier-protein] reductase; struct 83.17
3t4x_A267 Oxidoreductase, short chain dehydrogenase/reducta; 83.15
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 83.05
3tum_A269 Shikimate dehydrogenase family protein; rossmann-f 82.9
1mld_A314 Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D 82.87
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 82.8
3rih_A293 Short chain dehydrogenase or reductase; structural 82.79
3q2i_A 354 Dehydrogenase; rossmann fold, UDP-sugar binding, N 82.78
1ae1_A273 Tropinone reductase-I; oxidoreductase, tropane alk 82.77
4ibo_A271 Gluconate dehydrogenase; enzyme function initiativ 82.71
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 82.69
3lf2_A265 Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross 82.62
3kto_A136 Response regulator receiver protein; PSI-II,struct 82.58
4imr_A275 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor 82.58
3pi7_A349 NADH oxidoreductase; groes-like fold, NAD(P)-bindi 82.55
3tfo_A264 Putative 3-oxoacyl-(acyl-carrier-protein) reducta; 82.55
4iin_A271 3-ketoacyl-acyl carrier protein reductase (FABG); 82.53
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 82.45
4fc7_A277 Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman 82.42
3n74_A261 3-ketoacyl-(acyl-carrier-protein) reductase; seatt 82.37
3ezy_A 344 Dehydrogenase; structural genomics, unknown functi 82.35
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=3.8e-67  Score=507.40  Aligned_cols=272  Identities=34%  Similarity=0.644  Sum_probs=244.1

Q ss_pred             CcceeeccceEEEEEeCCCeeEEEEEecCceeEEEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHH
Q 016578           97 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLR  176 (387)
Q Consensus        97 g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~  176 (387)
                      +.+++++++++||+++|+||+|.|++++.+|++|+|||.+|++++||+.|||||+|+|++.|++|++||+||+|+|++++
T Consensus        20 ~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~r   99 (294)
T 3o4f_A           20 QFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLR   99 (294)
T ss_dssp             SEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHH
T ss_pred             CcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHH
Confidence            56678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCceEEEEeCCHHHHHHHHhhcccccC-CCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchH
Q 016578          177 EISRHDSVELIDICEIDKMVIDVSKKYFPELAV-GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEK  255 (387)
Q Consensus       177 el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~-~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~  255 (387)
                      ++++|+++++|++||||++|+++|+++|+.++. .++|||++++++|+++|++.. +++||+||+|++||.+++..||++
T Consensus       100 evlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~D~~dp~~~~~~L~t~  178 (294)
T 3o4f_A          100 EVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISDCTDPIGPGESLFTS  178 (294)
T ss_dssp             HHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEESCCCCCCTTCCSSCC
T ss_pred             HHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEEeCCCcCCCchhhcCH
Confidence            999999999999999999999999999998765 478999999999999999765 578999999999999999999999


Q ss_pred             HHHHHHHHhccCCCeEEecccccchhhhHHHHHHHHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCc
Q 016578          256 PFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINP  335 (387)
Q Consensus       256 ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~  335 (387)
                      +||+.++++|+|||++++|++++|++.+.+..+.++++++|+ .+.+++++|||||+|.|||++|||+.++.++.   .+
T Consensus       179 eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~as~~~~~~~~~---~~  254 (294)
T 3o4f_A          179 AFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDNDALRHLS---TE  254 (294)
T ss_dssp             HHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEEESCTTGGGCC---HH
T ss_pred             HHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeEECCCccccCC---hH
Confidence            999999999999999999999999999999999999999999 78999999999999999999999875433221   11


Q ss_pred             hhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHHHhhcC
Q 016578          336 IEKLEGADKHKRELRFYNSEIHSAAFALPAFLKREVSVL  374 (387)
Q Consensus       336 ~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~~l~~~  374 (387)
                      .. ..+......++||||+++|+|||+||+|+|++|+.+
T Consensus       255 ~~-~~~~~~~~~~~~yyn~~~h~aaF~lP~~~~~~l~~e  292 (294)
T 3o4f_A          255 II-QARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQ  292 (294)
T ss_dssp             HH-HHHHHSSCCCCSSCCHHHHHHHTCCCHHHHHHTTSS
T ss_pred             HH-hHHHHhhCCCceEECHHHHHHHccCcHHHHHHHhcC
Confidence            11 011123456899999999999999999999999764
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A Back     alignment and structure
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* Back     alignment and structure
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 Back     alignment and structure
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* Back     alignment and structure
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 Back     alignment and structure
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* Back     alignment and structure
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* Back     alignment and structure
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* Back     alignment and structure
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* Back     alignment and structure
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* Back     alignment and structure
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A Back     alignment and structure
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A* Back     alignment and structure
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* Back     alignment and structure
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} Back     alignment and structure
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* Back     alignment and structure
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} Back     alignment and structure
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} Back     alignment and structure
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} Back     alignment and structure
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* Back     alignment and structure
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 Back     alignment and structure
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} Back     alignment and structure
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 Back     alignment and structure
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} Back     alignment and structure
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... Back     alignment and structure
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} Back     alignment and structure
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} Back     alignment and structure
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} Back     alignment and structure
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 Back     alignment and structure
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 Back     alignment and structure
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} Back     alignment and structure
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* Back     alignment and structure
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} Back     alignment and structure
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} Back     alignment and structure
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 Back     alignment and structure
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* Back     alignment and structure
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 Back     alignment and structure
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 Back     alignment and structure
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Back     alignment and structure
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 Back     alignment and structure
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E Back     alignment and structure
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 Back     alignment and structure
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} Back     alignment and structure
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} Back     alignment and structure
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* Back     alignment and structure
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* Back     alignment and structure
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* Back     alignment and structure
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Back     alignment and structure
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 Back     alignment and structure
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* Back     alignment and structure
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* Back     alignment and structure
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Back     alignment and structure
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} Back     alignment and structure
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A Back     alignment and structure
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* Back     alignment and structure
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Back     alignment and structure
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} Back     alignment and structure
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* Back     alignment and structure
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* Back     alignment and structure
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} Back     alignment and structure
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 Back     alignment and structure
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} Back     alignment and structure
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} Back     alignment and structure
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Back     alignment and structure
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A Back     alignment and structure
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A Back     alignment and structure
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* Back     alignment and structure
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* Back     alignment and structure
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 Back     alignment and structure
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 Back     alignment and structure
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Back     alignment and structure
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* Back     alignment and structure
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* Back     alignment and structure
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} Back     alignment and structure
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} Back     alignment and structure
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} Back     alignment and structure
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* Back     alignment and structure
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* Back     alignment and structure
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 Back     alignment and structure
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 Back     alignment and structure
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 Back     alignment and structure
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* Back     alignment and structure
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 Back     alignment and structure
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} Back     alignment and structure
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 Back     alignment and structure
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* Back     alignment and structure
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} Back     alignment and structure
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Back     alignment and structure
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* Back     alignment and structure
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} Back     alignment and structure
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} Back     alignment and structure
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 Back     alignment and structure
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} Back     alignment and structure
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A Back     alignment and structure
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} Back     alignment and structure
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} Back     alignment and structure
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 Back     alignment and structure
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 Back     alignment and structure
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Back     alignment and structure
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* Back     alignment and structure
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* Back     alignment and structure
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 Back     alignment and structure
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} Back     alignment and structure
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* Back     alignment and structure
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Back     alignment and structure
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} Back     alignment and structure
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Back     alignment and structure
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A Back     alignment and structure
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli} Back     alignment and structure
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} Back     alignment and structure
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... Back     alignment and structure
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} Back     alignment and structure
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* Back     alignment and structure
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} Back     alignment and structure
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} Back     alignment and structure
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* Back     alignment and structure
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* Back     alignment and structure
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3} Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Back     alignment and structure
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} Back     alignment and structure
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* Back     alignment and structure
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Back     alignment and structure
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} Back     alignment and structure
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 Back     alignment and structure
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* Back     alignment and structure
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* Back     alignment and structure
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* Back     alignment and structure
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* Back     alignment and structure
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* Back     alignment and structure
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* Back     alignment and structure
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* Back     alignment and structure
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} Back     alignment and structure
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Back     alignment and structure
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Back     alignment and structure
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* Back     alignment and structure
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* Back     alignment and structure
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A* Back     alignment and structure
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} Back     alignment and structure
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* Back     alignment and structure
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* Back     alignment and structure
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} Back     alignment and structure
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* Back     alignment and structure
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* Back     alignment and structure
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} Back     alignment and structure
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 Back     alignment and structure
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} Back     alignment and structure
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 Back     alignment and structure
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae} Back     alignment and structure
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 Back     alignment and structure
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* Back     alignment and structure
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus} Back     alignment and structure
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A Back     alignment and structure
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A Back     alignment and structure
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* Back     alignment and structure
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* Back     alignment and structure
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 Back     alignment and structure
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A* Back     alignment and structure
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A Back     alignment and structure
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} Back     alignment and structure
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* Back     alignment and structure
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* Back     alignment and structure
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} Back     alignment and structure
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A* Back     alignment and structure
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59 Back     alignment and structure
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} Back     alignment and structure
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} Back     alignment and structure
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A Back     alignment and structure
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* Back     alignment and structure
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* Back     alignment and structure
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} Back     alignment and structure
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23 Back     alignment and structure
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A Back     alignment and structure
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A* Back     alignment and structure
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} Back     alignment and structure
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A* Back     alignment and structure
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus} Back     alignment and structure
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A* Back     alignment and structure
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24 Back     alignment and structure
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A* Back     alignment and structure
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus} Back     alignment and structure
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli} Back     alignment and structure
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26 Back     alignment and structure
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Back     alignment and structure
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Back     alignment and structure
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Back     alignment and structure
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ... Back     alignment and structure
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157} Back     alignment and structure
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Back     alignment and structure
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Back     alignment and structure
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Back     alignment and structure
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Back     alignment and structure
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} Back     alignment and structure
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda} Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* Back     alignment and structure
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Back     alignment and structure
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Back     alignment and structure
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Back     alignment and structure
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Back     alignment and structure
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Back     alignment and structure
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Back     alignment and structure
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A Back     alignment and structure
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Back     alignment and structure
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Back     alignment and structure
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A* Back     alignment and structure
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Back     alignment and structure
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 Back     alignment and structure
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* Back     alignment and structure
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica} Back     alignment and structure
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Back     alignment and structure
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Back     alignment and structure
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Back     alignment and structure
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Back     alignment and structure
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Back     alignment and structure
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Back     alignment and structure
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Back     alignment and structure
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Back     alignment and structure
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Back     alignment and structure
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A Back     alignment and structure
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Back     alignment and structure
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Back     alignment and structure
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Back     alignment and structure
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Back     alignment and structure
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Back     alignment and structure
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Back     alignment and structure
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Back     alignment and structure
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens} Back     alignment and structure
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A* Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Back     alignment and structure
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Back     alignment and structure
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Back     alignment and structure
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Back     alignment and structure
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Back     alignment and structure
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Back     alignment and structure
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Back     alignment and structure
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56 Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Back     alignment and structure
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Back     alignment and structure
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A* Back     alignment and structure
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Back     alignment and structure
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Back     alignment and structure
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Back     alignment and structure
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Back     alignment and structure
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Back     alignment and structure
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Back     alignment and structure
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Back     alignment and structure
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A* Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} Back     alignment and structure
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Back     alignment and structure
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Back     alignment and structure
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 Back     alignment and structure
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans} Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 Back     alignment and structure
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Back     alignment and structure
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* Back     alignment and structure
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Back     alignment and structure
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Back     alignment and structure
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Back     alignment and structure
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Back     alignment and structure
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Back     alignment and structure
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Back     alignment and structure
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A* Back     alignment and structure
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 Back     alignment and structure
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 Back     alignment and structure
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Back     alignment and structure
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Back     alignment and structure
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* Back     alignment and structure
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Back     alignment and structure
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Back     alignment and structure
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0 Back     alignment and structure
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} Back     alignment and structure
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Back     alignment and structure
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Back     alignment and structure
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Back     alignment and structure
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Back     alignment and structure
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d1xj5a_290 c.66.1.17 (A:) Spermidine synthase {Thale cress (A 1e-104
d2b2ca1312 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhab 1e-102
d2o07a1285 c.66.1.17 (A:16-300) Spermidine synthase {Human (H 1e-90
d1inla_295 c.66.1.17 (A:) Spermidine synthase {Thermotoga mar 1e-89
d1iy9a_274 c.66.1.17 (A:) Spermidine synthase {Bacillus subti 7e-83
d1uira_312 c.66.1.17 (A:) Spermidine synthase {Thermus thermo 2e-82
d1mjfa_276 c.66.1.17 (A:) Putative spermidine synthetase PF01 4e-79
d2b25a1324 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 2e-06
d1xvaa_292 c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Ra 3e-04
d1zx0a1229 c.66.1.16 (A:8-236) Guanidinoacetate methyltransfe 5e-04
d1nw3a_328 c.66.1.31 (A:) Catalytic, N-terminal domain of his 8e-04
d1booa_ 320 c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA me 0.001
d1i9ga_264 c.66.1.13 (A:) Probable methyltransferase Rv2118c 0.003
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 290 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  306 bits (785), Expect = e-104
 Identities = 201/323 (62%), Positives = 252/323 (78%), Gaps = 34/323 (10%)

Query: 49  STVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEIL 108
           STV+ GWFSE               +PMWP                  GEAHSLKV+++L
Sbjct: 1   STVIPGWFSE--------------MSPMWP------------------GEAHSLKVEKVL 28

Query: 109 FKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVG 168
           F+GKS+YQ+V+VF+S  YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK VLV+G
Sbjct: 29  FQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 88

Query: 169 GGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAVGFEDPRVRLHIGDAVEFLR 228
           GGDGGVLRE++RH S+E ID+CEIDKMV+DVSK++FP++A+G+EDPRV L IGD V FL+
Sbjct: 89  GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 148

Query: 229 QVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 288
               G YDA+IVDSSDP+GPA+EL EKPFF ++A+ALRPGGV+C  AES+WLH  +IED+
Sbjct: 149 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDI 208

Query: 289 ISICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRE 348
           +S CRE FKGSV+YAW SVPTYPSG+IGF++CSTEGP VDF +P+NPI+  E + K    
Sbjct: 209 VSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPID--ESSSKSNGP 266

Query: 349 LRFYNSEIHSAAFALPAFLKREV 371
           L+FYN+EIHSAAF LP+F K+ +
Sbjct: 267 LKFYNAEIHSAAFCLPSFAKKVI 289
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Length = 312 Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Length = 295 Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Length = 312 Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 276 Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 292 Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 229 Back     information, alignment and structure
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Length = 328 Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Length = 320 Back     information, alignment and structure
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 264 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1xj5a_290 Spermidine synthase {Thale cress (Arabidopsis thal 100.0
d2b2ca1312 Spermidine synthase {Caenorhabditis elegans [TaxId 100.0
d2o07a1285 Spermidine synthase {Human (Homo sapiens) [TaxId: 100.0
d1inla_295 Spermidine synthase {Thermotoga maritima [TaxId: 2 100.0
d1iy9a_274 Spermidine synthase {Bacillus subtilis [TaxId: 142 100.0
d1uira_312 Spermidine synthase {Thermus thermophilus [TaxId: 100.0
d1mjfa_276 Putative spermidine synthetase PF0127 (SpeE) {Arch 100.0
d1zx0a1229 Guanidinoacetate methyltransferase {Human (Homo sa 99.57
d1dusa_194 Hypothetical protein MJ0882 {Archaeon Methanococcu 99.54
d2fcaa1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil 99.5
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 99.5
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 99.46
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 99.46
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 99.46
d1yzha1204 tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep 99.45
d1l3ia_186 Precorrin-6Y methyltransferase (CbiT) {Archaeon Me 99.45
d1yb2a1250 Hypothetical protein Ta0852 {Thermoplasma acidophi 99.43
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 99.42
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 99.41
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 99.4
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 99.4
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 99.38
d1i9ga_264 Probable methyltransferase Rv2118c {Mycobacterium 99.36
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 99.36
d2b78a2317 Hypothetical protein SMu776, middle and C-terminal 99.36
d2as0a2324 Hypothetical protein PH1915, middle and C-terminal 99.35
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 99.35
d2esra1152 Putative methyltransferase SPy1538 {Streptococcus 99.34
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 99.34
d2avda1219 COMT domain-containing protein 1, COMTD1 {Human (H 99.34
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 99.33
d2nxca1254 PrmA-like protein TTHA0656 (TT0836) {Thermus therm 99.33
d2igta1309 Putative methyltransferase Atu0340 {Agrobacterium 99.31
d1susa1227 Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag 99.3
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 99.29
d1wxxa2318 Hypothetical protein TTHA1280, middle and C-termin 99.29
d1pjza_201 Thiopurine S-methyltransferase {Pseudomonas syring 99.29
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 99.28
d2b25a1324 Hypothetical protein FLJ20628 {Human (Homo sapiens 99.27
d1kpia_291 CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} 99.27
d1dl5a1213 Protein-L-isoaspartyl O-methyltransferase {Thermot 99.27
d2b3ta1274 N5-glutamine methyltransferase, HemK {Escherichia 99.26
d2gh1a1281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 99.26
d1vbfa_224 Protein-L-isoaspartyl O-methyltransferase {Sulfolo 99.25
d2p7ia1225 Hypothetical protein ECA1738 {Erwinia carotovora [ 99.25
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 99.24
d1kpga_285 CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} 99.23
d1i1na_224 Protein-L-isoaspartyl O-methyltransferase {Human ( 99.23
d1o54a_266 Hypothetical protein TM0748 {Thermotoga maritima [ 99.23
d2fpoa1183 Methylase YhhF {Escherichia coli [TaxId: 562]} 99.22
d1nt2a_209 Fibrillarin homologue {Archaeon Archaeoglobus fulg 99.2
d2fhpa1182 Putative methylase EF2452 {Enterococcus faecalis [ 99.2
d2bzga1229 Thiopurine S-methyltransferase {Human (Homo sapien 99.17
d2frna1260 Hypothetical protein PH0793 {Pyrococcus horikoshii 99.17
d1g8sa_230 Fibrillarin homologue {Archaeon Methanococcus jann 99.16
d1ws6a1171 Methyltransferase TTHA0928 {Thermus thermophilus [ 99.14
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 99.13
d1xvaa_292 Glycine N-methyltransferase {Rat (Rattus norvegicu 99.11
d1jg1a_215 Protein-L-isoaspartyl O-methyltransferase {Archaeo 99.11
d1g8aa_227 Fibrillarin homologue {Archaeon Pyrococcus horikos 99.08
d2cl5a1214 Catechol O-methyltransferase, COMT {Rat (Rattus no 99.06
d2fyta1311 Protein arginine N-methyltransferase 3, PRMT3 {Hum 99.06
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 99.06
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 99.06
d1r18a_223 Protein-L-isoaspartyl O-methyltransferase {Fruit f 99.04
d1g6q1_328 Arginine methyltransferase, HMT1 {Baker's yeast (S 99.02
d1nw3a_328 Catalytic, N-terminal domain of histone methyltran 99.01
d1oria_316 Protein arginine N-methyltransferase 1, PRMT1 {Rat 99.01
d1ne2a_197 Hypothetical protein Ta1320 {Archaeon Thermoplasma 99.0
d1wy7a1201 Hypothetical protein PH1948 {Archaeon Pyrococcus h 99.0
d2ifta1183 Putative methylase HI0767 {Haemophilus influenzae 98.98
d1nv8a_271 N5-glutamine methyltransferase, HemK {Thermotoga m 98.92
d1m6ya2192 TM0872, methyltransferase domain {Thermotoga marit 98.91
d2h00a1250 Methyltransferase 10 domain containing protein MET 98.85
d2a14a1257 Indolethylamine N-methyltransferase, INMT {Human ( 98.79
d1u2za_406 Catalytic, N-terminal domain of histone methyltran 98.73
d2g72a1263 Phenylethanolamine N-methyltransferase, PNMTase {H 98.62
d1qama_235 rRNA adenine dimethylase {Bacillus subtilis, Ermc' 98.6
d2dula1 375 N(2),N(2)-dimethylguanosine tRNA methyltransferase 98.57
d2f8la1328 Hypothetical protein Lmo1582 {Listeria monocytogen 98.57
d1fp1d2244 Chalcone O-methyltransferase {Alfalfa (Medicago sa 98.43
d2ih2a1223 DNA methylase TaqI, N-terminal domain {Thermus aqu 98.41
d1yuba_245 rRNA adenine dimethylase {Streptococcus pneumoniae 98.39
d2bm8a1232 Cephalosporin hydroxylase CmcI {Streptomyces clavu 98.32
d1fp2a2244 Isoflavone O-methyltransferase {Alfalfa (Medicago 98.23
d1uwva2358 rRNA (Uracil-5-)-methyltransferase RumA, catalytic 98.18
d1kyza2243 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra 98.06
d1zq9a1278 Probable dimethyladenosine transferase {Human (Hom 98.01
d1sqga2284 Ribosomal RNA small subunit methyltransferase B, R 98.01
d1qyra_252 High level kasugamycin resistance protein KsgA {Es 97.99
d1jsxa_207 Glucose-inhibited division protein B (GidB) {Esche 97.99
d1wg8a2182 TM0872, methyltransferase domain {Thermus thermoph 97.96
d2oyra1250 Hypothetical protein YhiQ {Shigella flexneri [TaxI 97.94
d1ej0a_180 RNA methyltransferase FtsJ {Escherichia coli [TaxI 97.92
d2okca1425 Type I restriction enzyme StySJI M protein {Bacter 97.92
d1af7a2193 Chemotaxis receptor methyltransferase CheR, C-term 97.88
d1xdza_239 Glucose-inhibited division protein B (GidB) {Bacil 97.82
d1ixka_313 Hypothetical methyltransferase PH1374 {Archaeon Py 97.71
d2p41a1257 An RNA cap (nucleoside-2'-O-)-methyltransferase do 97.53
d2b9ea1293 NOL1R {Human (Homo sapiens) [TaxId: 9606]} 97.49
d1i4wa_322 Transcription factor sc-mtTFB {Baker's yeast (Sacc 97.45
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 97.38
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 97.36
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 97.29
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 97.28
d2ar0a1 524 M.EcoKI {Escherichia coli [TaxId: 562]} 97.21
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 97.2
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 97.18
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 97.12
d1h2ba2172 Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ 96.99
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 96.97
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 96.87
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 96.78
d1jvba2170 Alcohol dehydrogenase {Archaeon Sulfolobus solfata 96.65
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 96.55
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 96.43
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 96.34
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 96.17
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 96.08
d1vj1a2187 Putative zinc-binding alcohol dehydrogenase {Mouse 95.97
d2fzwa2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 95.94
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 95.94
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 95.86
d1pqwa_183 Putative enoyl reductase domain of polyketide synt 95.7
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.63
d1g60a_256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 95.63
d2oo3a1271 Uncharacterized protein LPG1296 {Legionella pneumo 95.63
d1dcta_324 DNA methylase HaeIII {Haemophilus aegyptius [TaxId 95.6
d1eg2a_279 m.RsrI N6 adenosine-specific DNA methyltransferase 95.4
d1booa_ 320 m.PvuII N4 cytosine-specific DNA methyltransferase 95.4
d2fy8a1129 Potassium channel-related protein MthK {Archaeon M 95.27
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 95.23
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 95.08
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 95.06
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 94.57
d1qora2179 Quinone oxidoreductase {Escherichia coli [TaxId: 5 94.56
d1iz0a2171 Quinone oxidoreductase {Thermus thermophilus [TaxI 94.49
d1xa0a2176 B. subtilis YhfP homologue {Bacillus stearothermop 94.45
d1g55a_ 343 DNMT2 {Human (Homo sapiens) [TaxId: 9606]} 94.22
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 94.19
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 93.75
d2c7pa1327 DNA methylase HhaI {Haemophilus haemolyticus [TaxI 93.69
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 93.63
d1v3va2182 Leukotriene b4 12-hydroxydehydrogenase/prostagland 92.98
d1booa_320 m.PvuII N4 cytosine-specific DNA methyltransferase 92.91
d1id1a_153 Rck domain from putative potassium channel Kch {Es 92.44
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 92.4
d1ae1a_258 Tropinone reductase {Jimsonweed (Datura stramonium 92.11
d1g60a_256 Methyltransferase mboII {Moraxella bovis [TaxId: 4 92.1
d1eg2a_279 m.RsrI N6 adenosine-specific DNA methyltransferase 91.36
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 91.33
d1pr9a_244 Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 90.9
d2ae2a_259 Tropinone reductase {Jimsonweed (Datura stramonium 90.38
d1tt7a2167 Hypothetical protein YhfP {Bacillus subtilis [TaxI 90.18
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 89.84
d1o89a2177 Hypothetical protein YhdH {Escherichia coli [TaxId 89.79
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 89.55
d1xg5a_257 Putative dehydrogenase ARPG836 (MGC4172) {Human (H 89.5
d1zema1260 Xylitol dehydrogenase {Gluconobacter oxydans [TaxI 89.46
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 88.9
d1ydwa1184 Probable oxidoreductase At4g09670 {Thale cress (Ar 88.54
d1hdca_254 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre 88.48
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 88.45
d1xhla_274 Hypothetical protein F25D1.5 {Caenorhabditis elega 88.42
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 88.06
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 88.05
d2c07a1251 beta-keto acyl carrier protein reductase {Malaria 87.95
d1yb1a_244 17-beta-hydroxysteroid dehydrogenase type XI {Huma 87.86
d2iida1 370 L-aminoacid oxidase {Malayan pit viper (Calloselas 87.61
d1yxma1297 Peroxisomal trans 2-enoyl CoA reductase {Human (Ho 87.56
d1k2wa_256 Sorbitol dehydrogenase {Rhodobacter sphaeroides [T 87.5
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 87.46
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 87.26
d1xq1a_259 Tropinone reductase {Thale cress (Arabidopsis thal 87.18
d1nffa_244 Putative oxidoreductase Rv2002 {Mycobacterium tube 87.17
d1zk4a1251 R-specific alcohol dehydrogenase {Lactobacillus br 87.15
d1gega_255 meso-2,3-butanediol dehydrogenase {Klebsiella pneu 86.9
d1vl8a_251 Gluconate 5-dehydrogenase {Thermotoga maritima [Ta 86.89
d1cyda_242 Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 86.79
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 86.77
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 86.61
d1dz3a_123 Sporulation response regulator Spo0A {Bacillus ste 86.46
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 86.06
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 86.06
d1qkka_140 Transcriptional regulatory protein DctD, receiver 85.75
d1ydea1250 Retinal dehydrogenase/reductase 3 {Human (Homo sap 85.73
d1w6ua_294 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H 85.7
d1zesa1121 PhoB receiver domain {Escherichia coli [TaxId: 562 85.45
d1gu7a2189 2,4-dienoyl-CoA reductase {Yeast (Candida tropical 85.41
d1u0sy_118 CheY protein {Thermotoga maritima [TaxId: 2336]} 85.36
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 85.32
d1o9ga_249 rRNA methyltransferase AviRa {Streptomyces viridoc 85.21
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 85.01
d1yioa2128 Response regulatory protein StyR, N-terminal domai 84.77
d1peya_119 Sporulation response regulator Spo0F {Bacillus sub 84.7
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 84.53
d1h5qa_260 Mannitol dehydrogenase {Mushroom (Agaricus bisporu 84.47
d1kgsa2122 PhoB receiver domain {Thermotoga maritima [TaxId: 84.46
d1zkda1365 Hypothetical protein RPA4359 {Rhodopseudomonas pal 84.45
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 84.44
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 84.36
d1hxha_253 3beta/17beta hydroxysteroid dehydrogenase {Comamon 84.15
d1wmaa1275 Carbonyl reductase/20beta-hydroxysteroid dehydroge 83.95
d2bgka1268 Rhizome secoisolariciresinol dehydrogenase {Mayapp 83.74
d1iy8a_258 Levodione reductase {Corynebacterium aquaticum [Ta 83.64
d1mvoa_121 PhoP receiver domain {Bacillus subtilis [TaxId: 14 83.46
d1ja9a_259 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl 83.4
d1dbwa_123 Transcriptional regulatory protein FixJ, receiver 83.35
d1p2fa2120 Response regulator DrrB {Thermotoga maritima [TaxI 83.17
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 83.08
d1g0oa_272 1,3,8-trihydroxynaphtalene reductase (THNR, naphto 83.02
d1q7ba_243 beta-keto acyl carrier protein reductase {Escheric 83.01
d1sb8a_341 UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo 82.83
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 82.74
d1a04a2138 Nitrate/nitrite response regulator (NarL), receive 82.49
d2pl1a1119 PhoP receiver domain {Escherichia coli [TaxId: 562 82.25
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 82.19
d1xkqa_272 Hypothetical protein R05D8.7 {Caenorhabditis elega 82.02
d1ys7a2121 Transcriptional regulatory protein PrrA, N-termina 81.55
d1krwa_123 NTRC receiver domain {Salmonella typhimurium [TaxI 81.49
d2rhca1257 beta-keto acyl carrier protein reductase {Streptom 81.44
d1zh8a1181 Hypothetical protein TM0312 {Thermotoga maritima [ 81.25
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 80.9
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 80.71
d1xeaa1167 Putative oxidoreductase VCA1048 {Vibrio cholerae [ 80.66
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8e-67  Score=503.81  Aligned_cols=289  Identities=69%  Similarity=1.287  Sum_probs=269.3

Q ss_pred             ccccccccccccCccccCcccccCCCCCchhhcccccccccccccCCCcceeeccceEEEEEeCCCeeEEEEEecCceeE
Q 016578           50 TVVSGWFSESQSTSDKTGKTMYFNNPMWPAYRLLHHVCSICCSCSFAGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKV  129 (387)
Q Consensus        50 ~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~g~~~~~~v~~vl~~~~S~~q~I~v~es~~~G~~  129 (387)
                      +..+|||+|.              .++||                  |.+++++++++||+++|+||+|+|++++.+|++
T Consensus         2 ~~~~~w~~e~--------------~~~~~------------------~~~~~~~v~~~l~~~~S~yQ~i~v~~~~~~gr~   49 (290)
T d1xj5a_           2 TVIPGWFSEM--------------SPMWP------------------GEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKV   49 (290)
T ss_dssp             CCCSSEEEEC--------------CTTST------------------TEEEEEEEEEEEEEEECSSCEEEEEEESSSCEE
T ss_pred             CCCCcceecc--------------ccCCC------------------CceEEEEEeeEEEeCCCCCeEEEEEEeCCCCeE
Confidence            4678999998              78999                  999999999999999999999999999999999


Q ss_pred             EEEcCeEeecccchhHHHHHHHhccccCCCCCCEEEEEcCcccHHHHHHHhcCCCceEEEEeCCHHHHHHHHhhcccccC
Q 016578          130 LVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTVLVVGGGDGGVLREISRHDSVELIDICEIDKMVIDVSKKYFPELAV  209 (387)
Q Consensus       130 L~lDG~~q~~e~de~~Y~eml~~l~l~~~~~p~~VL~IG~G~G~~~~el~k~~~~~~Vt~VEiD~~vi~~ar~~~~~~~~  209 (387)
                      |+|||.+|++++||+.||||++|+|++.|++|++||+||+|+|++++++++|+++++|++||||++|+++|+++|+....
T Consensus        50 L~LDg~~q~~e~de~~Yhe~l~h~~~~~~~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~  129 (290)
T d1xj5a_          50 LVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI  129 (290)
T ss_dssp             EEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG
T ss_pred             EEECCeEeeeccchhHHHHHHhhHHHhhCCCCcceEEecCCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhc
Confidence            99999999999999999999999999999999999999999999999999999899999999999999999999988766


Q ss_pred             CCCCCCEEEEEcchhhHHhhCCCCCeeEEEEcCCCCCCCccccchHHHHHHHHHhccCCCeEEecccccchhhhHHHHHH
Q 016578          210 GFEDPRVRLHIGDAVEFLRQVPRGKYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMI  289 (387)
Q Consensus       210 ~~~d~rv~v~~gD~~~~l~~~~~~~fDvII~D~~dp~~~~~~L~~~ef~~~l~~~LkpgGvlv~q~~s~~~~~~~~~~~~  289 (387)
                      .++++|++++++|+++|+++..+++||+||+|+++|.+++..|++.+||+.++++|+|||++++|+++++.+.+.++.+.
T Consensus       130 ~~~~~r~~i~~~Da~~~l~~~~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~~~~~~~~~~i~  209 (290)
T d1xj5a_         130 GYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIV  209 (290)
T ss_dssp             GGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHH
T ss_pred             cccCCCcEEEEccHHHHHhhccccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecCCcHHHHHHHHHHH
Confidence            68899999999999999987655689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCcceEEEEeeccCCCcEEEEEEecCCCCCCCCCCCCchhhhhccccCCCCCeeeCHHHHHHHhcCCHHHHH
Q 016578          290 SICRETFKGSVHYAWASVPTYPSGIIGFLICSTEGPHVDFVNPINPIEKLEGADKHKRELRFYNSEIHSAAFALPAFLKR  369 (387)
Q Consensus       290 ~~l~~~F~~~v~~~~~~iPtyp~g~~gf~~ask~~~~~~~~~p~~~~~~~~~~~~~~~~l~yy~~~~h~aaF~lP~~~~~  369 (387)
                      ++++++|+.++.|+++.+|+|++|.|||++||++.++.++.+|...++..  ......+|||||+++|+|+|+||+|+|+
T Consensus       210 ~~l~~vF~~~~~y~~~~vPty~~g~w~f~~as~~~~~~~~~~~~~~~~~~--~~~~~~~l~yYn~~ih~~~F~lP~~~~~  287 (290)
T d1xj5a_         210 SNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDES--SSKSNGPLKFYNAEIHSAAFCLPSFAKK  287 (290)
T ss_dssp             HHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECSSSCCCSSSCSSCCCSG--GGTTTCCCSSCCHHHHHHTTCCCHHHHH
T ss_pred             hhhhhhcccceeEeeEeeeeecCCceEEEEEeCCCCccccccccchhHHH--HHhhcCCCcccCHHHHHHHccCcHHHHH
Confidence            99999999777888899999999999999999988888888887665432  2334568999999999999999999999


Q ss_pred             Hhh
Q 016578          370 EVS  372 (387)
Q Consensus       370 ~l~  372 (387)
                      +|+
T Consensus       288 ~l~  290 (290)
T d1xj5a_         288 VIE  290 (290)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            875
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} Back     information, alignment and structure
>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} Back     information, alignment and structure
>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} Back     information, alignment and structure
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]} Back     information, alignment and structure
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1dcta_ c.66.1.26 (A:) DNA methylase HaeIII {Haemophilus aegyptius [TaxId: 197575]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g55a_ c.66.1.26 (A:) DNMT2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure
>d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Back     information, alignment and structure
>d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} Back     information, alignment and structure
>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Back     information, alignment and structure
>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Back     information, alignment and structure
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1o9ga_ c.66.1.29 (A:) rRNA methyltransferase AviRa {Streptomyces viridochromogenes [TaxId: 1938]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Back     information, alignment and structure
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Back     information, alignment and structure
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Back     information, alignment and structure
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} Back     information, alignment and structure
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure