Citrus Sinensis ID: 016580

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
Protein Sequence
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDGPAGMLKINQAKSTLTQGA
Secondary Structure (PSIPRED)
ccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcEEEEEEccccHHHHHHHHHHHcEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHEHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccccccccccHHccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVlerkirpkltlPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYkgpiinftsggagshhgssvdssdshffTGTLMLIGSCFGWAGFFILQSftlkkypaelSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGfvskqkgpvfvtsfSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVvwgkskdppssaasftdEKAAAQelpitcksinvddnnidgpagmLKINQAKSTLTQGA
Flexible Loop (DISEMBL)
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDGPAGMLKINQAKSTLTQGA
Low Complexity Region (SEG)
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTsggagshhgssvdssdshFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDGPAGMLKINQAKSTLTQGA
Disordered region (IsUnstruct)
******FVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG***************HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG***********************ITCK*I***************************
Disordered Region (DISOPRED)
**************SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFT*****************HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG********************************************************
Disordered Region (DISEMBL)
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGG************DSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS************EKAAAQELPITCKSINVDDNNIDGPAGMLKINQA********
Disordered Region (DISPRO)
******FVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG**************SHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS******************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDGPAGMLKINQAKSTLTQGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	387	2.2.26 [Sep-21-2011]
Q501F8	373	WAT1-related protein At4g	yes	no	0.937	0.973	0.635	1e-136
F4HZQ7	389	WAT1-related protein At1g	no	no	0.940	0.935	0.613	1e-133
Q9LPF1	370	WAT1-related protein At1g	no	no	0.912	0.954	0.630	1e-128
O80638	374	WAT1-related protein At2g	no	no	0.886	0.917	0.553	1e-106
Q9SUF1	384	WAT1-related protein At4g	no	no	0.906	0.914	0.526	1e-105
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.896	0.913	0.528	1e-104
Q9FL41	402	WAT1-related protein At5g	no	no	0.904	0.870	0.463	4e-98
F4IJ08	394	WAT1-related protein At2g	no	no	0.901	0.885	0.450	2e-90
Q9LXX8	377	WAT1-related protein At3g	no	no	0.806	0.827	0.501	2e-90
Q9FNA5	377	WAT1-related protein At5g	no	no	0.896	0.920	0.438	2e-83

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/376 (63%), Positives = 292/376 (77%), Gaps = 13/376 (3%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           + K KP +AIISLQFGYAGMYIITMVS KHGM+H++LA YRHVVATIV+APFA +LERKI
Sbjct: 6   MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPK+T P+FLRI+ALGFLEP+LDQNLYY+GMK T+AT++SA VN LPA+TFI+A+IFR+E
Sbjct: 66  RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHH----GSSVDSSDSHF 189
           TVN+++ +SLAKVIGTA+TV GAMVMTLYKGP I        S H    G+S +++D ++
Sbjct: 126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNW 185

Query: 190 FTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAW 249
            TGTL ++GS   WAGFFILQSFTLKKYPAELSL   IC MG V     SLIM RD+SAW
Sbjct: 186 VTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAW 245

Query: 250 KIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAEL 309
           K+G DS  LAA YSGVVCSG+AYY+Q  V +++GPVF TSFSP+CMIIT+ LGV++LAE 
Sbjct: 246 KVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEK 305

Query: 310 VHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDG 369
           +HLGSI+GAI IVFGLY+VVWGK+KD   S     +EK   QELPIT  S  V+   I  
Sbjct: 306 IHLGSIIGAIFIVFGLYSVVWGKAKDEVISV----EEKIGMQELPITNTSTKVEGGGITS 361

Query: 370 PAGMLKINQAKSTLTQ 385
                ++N+  +  TQ
Sbjct: 362 -----EVNEGVTNNTQ 372

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  473 bits (1218), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/386 (61%), Positives = 300/386 (77%), Gaps = 22/386 (5%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           ++  KPYLA+IS+QFGYAGMYIITMVSLKHGM+HYVLAVYRH +AT V+APFA   ERKI
Sbjct: 6   MNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKI 65

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPK+T  +FL+I  LGF+EPVLDQNLYY+GM YT+ATFASAT N+LPA+TF+LAIIFRLE
Sbjct: 66  RPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLE 125

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINF----------TSGGAGSHHGSSVD 183
           +VN ++++S+AKV+GT +TV+GA++MTLYKGPI++F          + G  GSH G+   
Sbjct: 126 SVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAA 185

Query: 184 SSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIME 243
           + D H+  GTLML+G  FGWAGFFILQSFTLK+YPAELSL+TLICLMG +EG AVSL+  
Sbjct: 186 AMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTV 245

Query: 244 RDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGV 303
           RD+SAWKIGFDS L AAAYSGV+CSG+AYYVQG V +++GPVFV +F+PLC++IT+ALGV
Sbjct: 246 RDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGV 305

Query: 304 IILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVD 363
           ++L+E +HLGS++G + I+ GLYTVVWGK KD        TD+    + LPI      VD
Sbjct: 306 VVLSESIHLGSVIGTLFIIVGLYTVVWGKGKD-----KRMTDDDEDCKGLPIKSPVKPVD 360

Query: 364 DNNIDGPAGMLKI-----NQAKSTLT 384
                G A  L++      +AK+T T
Sbjct: 361 TGK--GLAAELEMKSKEGQEAKATTT 384

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  457 bits (1176), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/360 (63%), Positives = 275/360 (76%), Gaps = 7/360 (1%)

Query: 13  ALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERK 72
           ++ K KP LAIISLQFGYAGMYIITMVS KHGM H+VLA YRHVVAT+V+APFA + ERK
Sbjct: 5   SMEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERK 64

Query: 73  IRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRL 132
           IRPK+TL +F R++ALG LEP++DQNLYY+G+K T+A++ SA  N LPAVTFILA+IFRL
Sbjct: 65  IRPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRL 124

Query: 133 ETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHH-GSSVDSSDSHFFT 191
           ETVN R++ S+AKV+GT +TV GAM+MTLYKGP I        S H GSS   +  H+  
Sbjct: 125 ETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQHWVL 184

Query: 192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKI 251
           GT+ ++GS   WA FFILQS+TLK YPAELSL TLIC +G +  A  SLIM RD SAWKI
Sbjct: 185 GTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKI 244

Query: 252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVH 311
           G DS  LAA YSGVVCSGIAYY+Q  V KQ+GPVF TSFSP+CMIIT+ LG ++LAE +H
Sbjct: 245 GMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIH 304

Query: 312 LGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEK--AAAQELPITCKSINVDDNNIDG 369
           LGSI+GA+ IV GLY+VVWGKSKD  +      DEK  A +QELPIT      + +++ G
Sbjct: 305 LGSIIGAVFIVLGLYSVVWGKSKDEVNP----LDEKIVAKSQELPITNVVKQTNGHDVSG 360

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/352 (55%), Positives = 253/352 (71%), Gaps = 9/352 (2%)

Query: 12  LALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLER 71
           +AL  +KP++ ++SLQFGYAG+ II   +L  GMS +VLA YRH+VATI +APFA+ L+R
Sbjct: 1   MALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDR 60

Query: 72  KIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFR 131
           KIRPK+TL +F +I+ LG LEP +DQNLYY GMKYT+ATF +A  N+LPA  FI+A IFR
Sbjct: 61  KIRPKMTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query: 132 LETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFT 191
           LE VNV+++ S AK++GT VTV GAM+MT+ KGP+I          H  S ++      T
Sbjct: 121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLT 180

Query: 192 --GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSA 248
              +L+ IG C  WAGF  LQ+ TLK YP ELSL+  IC +G +E   V+L +ER + SA
Sbjct: 181 KGASLIAIG-CICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSA 239

Query: 249 WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAE 308
           W I  DS+LLAA Y GV+CSGI YYVQG + K +GPVFVT+F+PL M+I + LG IILAE
Sbjct: 240 WAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAE 299

Query: 309 LVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSI 360
           ++ LG ILGAI+IV GLY+V+WGKSKD PSS  SF+D     +ELP++   I
Sbjct: 300 VMFLGRILGAIVIVLGLYSVLWGKSKDEPSS--SFSDMD---KELPLSTPQI 346

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  380 bits (977), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/357 (52%), Positives = 253/357 (70%), Gaps = 6/357 (1%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           + K +PYL +I LQFG AG YI+ M +L  G + YV+ VYR++VA +VLAPFA + ERK+
Sbjct: 8   MHKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKV 67

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPK+TL V  +IMALGFLEPVLDQ   YLGM  T+AT+ SA +NILP+VTFI+A I R+E
Sbjct: 68  RPKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRME 127

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPII--NFTSGGAGSHHGSSVDSSD-SHFF 190
            VN+  ++S AK+IGT V + GA+VMTLYKGP+I   +++      +G + +S D +++ 
Sbjct: 128 KVNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWV 187

Query: 191 TGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWK 250
            GTL+++  C  W+GF++LQS T+K YPA+LSLS LICL G V+  AV+L++ER  S W 
Sbjct: 188 VGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWA 247

Query: 251 IGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELV 310
           +G+D+RL A  Y+G+V SGI YYVQG V K +GPVFVT+F+PLCMI+ + +   IL E +
Sbjct: 248 VGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQI 307

Query: 311 HLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNI 367
           H G ++G  +I  GLY VVWGK KD   S      EK + QELPIT KS   DDN +
Sbjct: 308 HFGCVIGGAVIAAGLYMVVWGKGKDYEVSGLDIL-EKNSLQELPITTKS--EDDNKL 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/354 (52%), Positives = 256/354 (72%), Gaps = 7/354 (1%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           + K +P+++++ LQ G AGM I++   L  GMS+YVL VYRH VATIV+APFAF  ++K+
Sbjct: 10  MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPK+TL +F +I  LG LEPV+DQNLYYLGMKYTTATFA+A  N+LPA+TF+LA IF LE
Sbjct: 70  RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIIN-FTSGGAGSHHGSSVDSSDSHFFTG 192
            V +R ++S  KV+GT  TV GAM+MTL KGP+++ F + G  +H+ +  D   +    G
Sbjct: 130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSA--IKG 187

Query: 193 TLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSAWKI 251
            +++   CF +A F ILQ+ TL+ YPAELSL+  ICLMG +EG AV+L+ME+ + SAW I
Sbjct: 188 AVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAI 247

Query: 252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVH 311
           G+D++LL A YSG+VCS +AYYV G V K +GPVFVT+FSPLCMII + +  II AE ++
Sbjct: 248 GWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMY 307

Query: 312 LGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDN 365
           LG +LGA++I  GLY V+WGK KD   ++    D+++A  +L +   S N  DN
Sbjct: 308 LGRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLEL---SGNGKDN 358

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  358 bits (919), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 180/388 (46%), Positives = 256/388 (65%), Gaps = 38/388 (9%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           L+  KPY A+ISLQFGYAGM IIT +SL  GMSHYVL VYRH +AT V+APFAF  ERK 
Sbjct: 13  LTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKA 72

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           +PK+T  +F+++  LG L PV+DQN YY+G+KYT+ TF+ A  N+LPA+TFILA++FR+E
Sbjct: 73  QPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRME 132

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDS------ 187
            +++++L   AK+ GT VTVAGAM+MT+YKGPI+        + +    DSS +      
Sbjct: 133 MLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELF----WTKYMHIQDSSHANTTSSK 188

Query: 188 ------HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPA-ELSLSTLICLMGVVEGAAVSL 240
                  F  G+++LI +   WA  F+LQ+  LK Y   +LSL+TLIC +G ++  AV+ 
Sbjct: 189 NSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTF 248

Query: 241 IMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSA 300
           +ME + SAW+IG+D  LLAAAYSG+V S I+YYVQG V K++GPVF T+FSPL M+I + 
Sbjct: 249 VMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAV 308

Query: 301 LGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSI 360
           +G  +LAE + LG ++GA+LIV GLY V+WGK K+   +                 C+  
Sbjct: 309 MGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKENQVT----------------ICELA 352

Query: 361 NVDDN-----NIDGPAGMLKINQAKSTL 383
            +D N     +++     +KI++  +++
Sbjct: 353 KIDSNSKVTEDVEANGSKMKISEGDNSM 380

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  333 bits (853), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 164/364 (45%), Positives = 238/364 (65%), Gaps = 15/364 (4%)

Query: 18  KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL 77
           KPY A++ LQFGYAGM ++T   L  GMSHYVL  YR+  AT  +APFA + ERK+R K+
Sbjct: 10  KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKM 69

Query: 78  TLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNV 137
           T P+F+RI  L  L PV+DQNLYY+G+K T+ TF+SA  NI+PA+T ILA +FR+E V +
Sbjct: 70  TFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEM 129

Query: 138 RRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLI 197
           R+++ L KV+GT VTV G+++M  YKGP INF      SH  ++     + +    + L+
Sbjct: 130 RKVRCLVKVMGTLVTVVGSILMIFYKGPFINFFR----SHLTAASSPPTADYLKAAVFLL 185

Query: 198 GSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRL 257
            +   WA FF+LQ+ TLKKY A LS+ST++C MG ++  A++ +ME + SA  IGFD  L
Sbjct: 186 LASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNL 245

Query: 258 LAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILG 317
           LA+AY+G++ S IAYYVQG + ++KGPVFVT+F+PL ++I S +   +L + ++LG ++G
Sbjct: 246 LASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIG 305

Query: 318 AILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNIDGPAGMLKIN 377
            ++++ G+Y V+WGK  D         D   A     + C S N      +G   M KI+
Sbjct: 306 VVVLMVGVYAVLWGKHVDDDGEETRHEDNVVA-----VKCCSGN------NGLTIMPKID 354

Query: 378 QAKS 381
           +A  
Sbjct: 355 EADE 358

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LXX8|WTR27_ARATH WAT1-related protein At3g56620 OS=Arabidopsis thaliana GN=At3g56620 PE=2 SV=1

 Score =  332 bits (852), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/317 (50%), Positives = 228/317 (71%), Gaps = 5/317 (1%)

Query: 18  KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL 77
           KPY A++ LQFGYAGM ++T V L  GMSHYVL  YR+  AT  +APFA + ERK+RPK+
Sbjct: 10  KPYFAMVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRPKM 69

Query: 78  TLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNV 137
           T P+F++I  L  L P++DQNLYY G+K T+ TFA A  NI+PA+TFI++II R+E V +
Sbjct: 70  TFPIFMQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPALTFIISIICRMEKVEM 129

Query: 138 RRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSH-HGSSVDSSDSHFFTGTLML 196
           R+++  AKV+GT V V GAM+M L+K P+I F      SH  G ++  +   +   T+ L
Sbjct: 130 RKVRFQAKVVGTLVIVVGAMLMILFKIPLITFLR----SHLTGHALSPAGEDYLKATVFL 185

Query: 197 IGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSR 256
           + + F WA FF+LQ+ TLK+Y + LSLST++C MG ++  A++ +ME ++SAW IGFD  
Sbjct: 186 LIASFSWASFFVLQAATLKRYSSHLSLSTMVCFMGTLQSTALTFVMEPNLSAWNIGFDMN 245

Query: 257 LLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSIL 316
           LLA+AY+G++ S IAYYVQG ++KQK  +FVT+F+PL +II S +G +IL + ++LG +L
Sbjct: 246 LLASAYAGIMSSSIAYYVQGMMTKQKSVIFVTAFNPLVVIIGSIIGFLILNQTLNLGGVL 305

Query: 317 GAILIVFGLYTVVWGKS 333
           G  ++V G+ TV+WGK 
Sbjct: 306 GMAILVVGVCTVLWGKE 322

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNA5|WTR39_ARATH WAT1-related protein At5g13670 OS=Arabidopsis thaliana GN=At5g13670 PE=2 SV=1

 Score =  310 bits (793), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 160/365 (43%), Positives = 232/365 (63%), Gaps = 18/365 (4%)

Query: 12  LALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLER 71
           +   + +P++AI+ +Q  YA M I+  ++L  GMS +VL  YR  VA+ ++ PFA +LER
Sbjct: 1   MKFERARPFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILER 60

Query: 72  KIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFR 131
             RPKLT  + L+I  L   EPV++QNLYY GMK TTATF SA  N LPA+TFI+A +F+
Sbjct: 61  NTRPKLTFKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFK 120

Query: 132 LETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINF----TSGGAGSHHGSSVDSSDS 187
           LE V + R  S AK++GT V + GAM+MT  KG +I       S G   H  +      +
Sbjct: 121 LEKVTIERRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQA 180

Query: 188 HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DM 246
               G++ML+ SCF W+ + ILQ+  L +Y AELSL+ L+C+MG++E   + LI ER +M
Sbjct: 181 DIARGSIMLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNM 240

Query: 247 SAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIIL 306
           S WKI  D  LLA+ Y G+V SG+AYYV G+ SK++GPVFV++F+PL M++ + L   + 
Sbjct: 241 SVWKINPDVTLLASIYGGLV-SGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVF 299

Query: 307 AELVHLGSILGAILIVFGLYTVVWGKSKDP-----PSSAASFTDEKAAAQELPITCKSIN 361
            E V++G ++G+++IV G+Y V+WGKSKD      P++  + T  K   Q++P       
Sbjct: 300 LEKVYVGRVIGSVVIVIGIYLVLWGKSKDKGGMLQPNAGCAETVVKIDQQKVP------- 352

Query: 362 VDDNN 366
             DNN
Sbjct: 353 TPDNN 357

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	387
302141834	391	unnamed protein product [Vitis vinifera]	0.987	0.976	0.705	1e-155
224066845	349	predicted protein [Populus trichocarpa]	0.894	0.991	0.767	1e-154
224082270	344	predicted protein [Populus trichocarpa]	0.883	0.994	0.763	1e-153
188509932	382	putative nodulin-like protein [Gossypioi	0.974	0.986	0.684	1e-151
359492400	389	PREDICTED: auxin-induced protein 5NG4 [V	0.948	0.943	0.711	1e-150
153805698	385	nodulin family protein [Gossypium hirsut	0.971	0.976	0.672	1e-149
255545464	370	Auxin-induced protein 5NG4, putative [Ri	0.945	0.989	0.681	1e-145
357461543	394	Auxin-induced protein 5NG4 [Medicago tru	0.958	0.941	0.659	1e-140
356518533	504	PREDICTED: auxin-induced protein 5NG4-li	0.976	0.75	0.640	1e-138
358248826	394	uncharacterized protein LOC100811114 [Gl	0.976	0.959	0.631	1e-138

>gi|302141834|emb|CBI19037.3| unnamed protein product [Vitis vinifera]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/387 (70%), Positives = 323/387 (83%), Gaps = 5/387 (1%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           MGDQT FV   L  SK K YL I+SLQFGYAGMYIITMVSLKHGM+HYVL VYRH VAT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           V+APFA VLERK+RPK+TL  FL+IM LGFLEPVLDQNLYY+GMKYT+ATFASATVN+LP
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGS 180
           A+TFILAIIFRLE +N++++ S AKVIGT +TV GAMVMTLYKGPII+F      SHH S
Sbjct: 121 AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHHES 180

Query: 181 SVD-SSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVS 239
           S D S+  ++ TGTLML+GSCFGW+GFFILQSFTLK+YPAELSL+ LIC MG V+GAAV+
Sbjct: 181 SSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAVA 240

Query: 240 LIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITS 299
           L+MERD +AW +GFDSR+LAAAYSGVVCSGIAYYVQ  V K++GPVFVT+FSPLCMIIT+
Sbjct: 241 LVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIITA 300

Query: 300 ALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASF-TDEKA-AAQELPI-- 355
           ALG  ILAE +HLGSILGA +IV GLY+VVWGKSK+  SSA+   TDEKA  + ELP+  
Sbjct: 301 ALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSASQAPTDEKAGGSHELPVAS 360

Query: 356 TCKSINVDDNNIDGPAGMLKINQAKST 382
           + K   V +NN++G  GMLKI  ++++
Sbjct: 361 STKPSIVHNNNMEGDGGMLKIRVSEAS 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066845|ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1| predicted protein [Populus trichocarpa]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/349 (76%), Positives = 306/349 (87%), Gaps = 3/349 (0%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           L K KPYLA++SLQFGYAGMYIITMVSLKHGMSHY+LAVYRHVVATIV+APFA VLERKI
Sbjct: 1   LKKVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKI 60

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPKLTLP+FLRIMALGFLEPVLDQNLYYLGMKYT+ATFASATVN LPA+TFI+A+IFRLE
Sbjct: 61  RPKLTLPIFLRIMALGFLEPVLDQNLYYLGMKYTSATFASATVNALPAITFIMALIFRLE 120

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSS-DSHFFTG 192
           TVN ++L S AKV+GT +TV GAMVMTLYKGPII+F      +H G++ ++S + H+ TG
Sbjct: 121 TVNFKKLHSAAKVVGTVITVTGAMVMTLYKGPIIDFIRSQGAAHRGTTSNASGNQHWLTG 180

Query: 193 TLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIG 252
           TLML+ SC GWA FFILQSFTLKKYPAELSL+ LIC+ G+VEGAAVSL+MERDMSAWKIG
Sbjct: 181 TLMLLASCCGWASFFILQSFTLKKYPAELSLTALICMTGMVEGAAVSLVMERDMSAWKIG 240

Query: 253 FDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHL 312
           FDSRLLAAAYSGVVCSGIAYYVQG V ++KGPVFVTSFSPLCMIIT+ALG ++L+E + L
Sbjct: 241 FDSRLLAAAYSGVVCSGIAYYVQGVVIRKKGPVFVTSFSPLCMIITAALGSVVLSEQIRL 300

Query: 313 GSILGAILIVFGLYTVVWGKSKDPPSSAA-SFTDEKAAAQ-ELPITCKS 359
           GSI+GA+LIVFGLYTVVWGKSKD  SS+    T+EK   Q +LPI   S
Sbjct: 301 GSIIGAVLIVFGLYTVVWGKSKDSISSSTMELTNEKGGPQDQLPIQDSS 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082270|ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1| predicted protein [Populus trichocarpa]

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 262/343 (76%), Positives = 299/343 (87%), Gaps = 1/343 (0%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           L K K YLA++SLQFGYAGMYIITMVSLKHGMSHY+LAVYRHVVAT+V+APFAFVLERKI
Sbjct: 1   LKKVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKI 60

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPKLTL +FLRIM LGFLEPVLDQNLYYLGMKYT+ATF+SAT N LPA+TF++A+ FRLE
Sbjct: 61  RPKLTLSIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFSSATTNALPAITFLMALCFRLE 120

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGT 193
           TVN ++L S AK IGT +TV GAMVMTLYKGP+I+F      +HHG+S +S + H  TGT
Sbjct: 121 TVNFKKLHSAAKAIGTVITVTGAMVMTLYKGPVIDFIRSHGAAHHGTSNESGNQHRLTGT 180

Query: 194 LMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGF 253
           LML+GSC  WAGFFILQSFTLKKYPAELSL+ LIC+MGVVEGAAVSL+MERDM AWKIGF
Sbjct: 181 LMLLGSCCAWAGFFILQSFTLKKYPAELSLTALICVMGVVEGAAVSLVMERDMGAWKIGF 240

Query: 254 DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLG 313
           DSRLLAAAYSGVVCSGIAYYVQG V +++GPVFVTSFSPLCMI T+ALG ++LAE +HLG
Sbjct: 241 DSRLLAAAYSGVVCSGIAYYVQGVVIRERGPVFVTSFSPLCMITTAALGSLVLAEQIHLG 300

Query: 314 SILGAILIVFGLYTVVWGKSKDP-PSSAASFTDEKAAAQELPI 355
           SI+GA+LIV+GLYTVVWGKSK+   SS    T+EK   QELPI
Sbjct: 301 SIIGAVLIVWGLYTVVWGKSKERINSSKLQMTNEKTGTQELPI 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|188509932|gb|ACD56621.1| putative nodulin-like protein [Gossypioides kirkii]

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/384 (68%), Positives = 324/384 (84%), Gaps = 7/384 (1%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           MG QTP+ +    L+K KPYL+++SLQFGYAGMYII+MVSLKHGMS+++LA YRHV AT+
Sbjct: 1   MGGQTPYAALRNMLNKVKPYLSMVSLQFGYAGMYIISMVSLKHGMSNFILATYRHVAATV 60

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           V+APFAFVLERK+RPK+TLPVFLRI+ LGF+EPVLDQNLY+LGMKYT+AT+ASA +NI+P
Sbjct: 61  VIAPFAFVLERKVRPKMTLPVFLRIVILGFIEPVLDQNLYFLGMKYTSATYASAFLNIVP 120

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGS 180
           AVTFI+A+IFRLE +NV++++S+AK+IGTAVTV GAMVMTLYKGPII+F   G  +HHG+
Sbjct: 121 AVTFIMAMIFRLEKINVKKIRSVAKIIGTAVTVMGAMVMTLYKGPIIDFVKSGGATHHGT 180

Query: 181 SVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSL 240
           + +S+D H   GT+ML+GS F W+ FFILQSFTLKKYPAELSL+  IC MG++EGA VSL
Sbjct: 181 TTESADKHRVAGTIMLLGSVFCWSSFFILQSFTLKKYPAELSLTAWICFMGMLEGAGVSL 240

Query: 241 IMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSA 300
           IM RD+ AWKIG++SRLLAA YSGVVCSGI YYVQG V +++GPVFVTSFSPLCMIIT+A
Sbjct: 241 IMVRDLRAWKIGWNSRLLAATYSGVVCSGITYYVQGVVIRERGPVFVTSFSPLCMIITAA 300

Query: 301 LGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAA-QELPIT--C 357
           LG IILAE +HLGSILGAI+IV GLYTVVWGKSKD  ++    TDEK+   QELP+T   
Sbjct: 301 LGAIILAEKLHLGSILGAIIIVLGLYTVVWGKSKDGKNTE---TDEKSNGLQELPVTNNA 357

Query: 358 KSINVDDNNIDGPAGMLKINQAKS 381
           K+I+VD   IDG   ++ I  +K+
Sbjct: 358 KAISVDV-GIDGADKIVNIPTSKN 380

Source: Gossypioides kirkii

Species: Gossypioides kirkii

Genus: Gossypioides

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492400|ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/374 (71%), Positives = 311/374 (83%), Gaps = 7/374 (1%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           MGDQT FV   L  SK K YL I+SLQFGYAGMYIITMVSLKHGM+HYVL VYRH VAT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           V+APFA VLERK+RPK+TL  FL+IM LGFLEPVLDQNLYY+GMKYT+ATFASATVN+LP
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGS 180
           A+TFILAIIFRLE +N++++ S AKVIGT +TV GAMVMTLYKGPII+F      SHH S
Sbjct: 121 AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHHES 180

Query: 181 SVD-SSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVS 239
           S D S+  ++ TGTLML+GSCFGW+GFFILQSFTLK+YPAELSL+ LIC MG V+GAAV+
Sbjct: 181 SSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAVA 240

Query: 240 LIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITS 299
           L+MERD +AW +GFDSR+LAAAYSGVVCSGIAYYVQ  V K++GPVFVT+FSPLCMIIT+
Sbjct: 241 LVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIITA 300

Query: 300 ALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASF-TDEKAA----AQELP 354
           ALG  ILAE +HLGSILGA +IV GLY+VVWGKSK+  SSA+   TDEKA      Q + 
Sbjct: 301 ALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSASQAPTDEKAVFIIKEQNIH 360

Query: 355 ITCKSINVDDNNID 368
           +  +SINV  N ++
Sbjct: 361 LD-QSINVSLNMVE 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|153805698|gb|ABS52574.1| nodulin family protein [Gossypium hirsutum]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/385 (67%), Positives = 317/385 (82%), Gaps = 9/385 (2%)

Query: 1   MGDQTPFVS-FCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVAT 59
           MGDQT   S     L+K KPYLAIISLQFGYAGMYI++ + +KHGMS+++LA YRHVVAT
Sbjct: 1   MGDQTSSASALSDVLNKAKPYLAIISLQFGYAGMYILSTICMKHGMSNFILATYRHVVAT 60

Query: 60  IVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNIL 119
           IV+APFAFVLERKIRPK+TLP+FLRI+ LGFLEPVLDQNLYYLGMK+TTAT++SA VN+L
Sbjct: 61  IVIAPFAFVLERKIRPKMTLPIFLRIVVLGFLEPVLDQNLYYLGMKFTTATYSSAFVNML 120

Query: 120 PAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHG 179
           PAVTFI+A+IFRLE +N++++ S+AKV+GTA+TV GAMVMTLYKGPII+F   G  +HH 
Sbjct: 121 PAVTFIMAMIFRLEKINLKKIHSIAKVVGTAITVGGAMVMTLYKGPIIDFVKSGGATHHS 180

Query: 180 SSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVS 239
           ++ +S+D H+ +GT+ML+GS  GW+ FFILQSFTLKKYPAELSL+  IC MG V+ A +S
Sbjct: 181 TNTESADQHWVSGTIMLLGSIAGWSSFFILQSFTLKKYPAELSLTAWICFMGTVQDAGLS 240

Query: 240 LIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITS 299
            IM RD+SAWKIGFDSRLLAA+YSG+VCSGIAYYVQG V  Q+GPVFVT+FSPLCMIIT+
Sbjct: 241 FIMVRDLSAWKIGFDSRLLAASYSGIVCSGIAYYVQGIVIWQRGPVFVTAFSPLCMIITA 300

Query: 300 ALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPIT--C 357
           ALG +ILAE +HLGSILGAI+IV GLYTVVWGKSKD  +      ++    QELPIT   
Sbjct: 301 ALGTVILAEKIHLGSILGAIIIVSGLYTVVWGKSKDVKT--PELEEKSNGLQELPITDNG 358

Query: 358 KSINVDDNNIDGPAGMLKINQAKST 382
           +S+NV    +DG A  + I  +K+T
Sbjct: 359 RSMNV----VDGAANAVNIPDSKNT 379

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545464|ref|XP_002513792.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223546878|gb|EEF48375.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/371 (68%), Positives = 306/371 (82%), Gaps = 5/371 (1%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           M +Q+     C  + K KP++AI+SLQFGYAGMYIITMVSLK GMSHY+LAVYRHVVAT+
Sbjct: 1   MEEQSLCKKLCQGIIKVKPFIAIVSLQFGYAGMYIITMVSLKRGMSHYILAVYRHVVATL 60

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           V+APFA VLERK RPK+TLP+FLRI ALGFLEPVLDQN+YY+G++YT+ATFASA++N+LP
Sbjct: 61  VIAPFALVLERKTRPKMTLPIFLRIAALGFLEPVLDQNMYYVGLQYTSATFASASINVLP 120

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGS 180
           A+TFI+AI+FRLE VN++R++ +AKVIGT +TVAGAMVMTLYKGP+++       +HH  
Sbjct: 121 AITFIMAIVFRLERVNIKRVRDVAKVIGTCITVAGAMVMTLYKGPVLDIIRSHGAAHHKG 180

Query: 181 SVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSL 240
             + S+ H+  GTL+L+GSCFGW+GFFILQSFTLKKYPAELSL+ LICLMG VEGAAVSL
Sbjct: 181 GSEPSNQHWIVGTLLLLGSCFGWSGFFILQSFTLKKYPAELSLTALICLMGTVEGAAVSL 240

Query: 241 IMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSA 300
           IMERDMSAWKIGFDSRLLAA Y+GVVCSG AYY+QG V K++GPVFVTSFSPLCMIIT+A
Sbjct: 241 IMERDMSAWKIGFDSRLLAAVYTGVVCSGCAYYIQGVVIKERGPVFVTSFSPLCMIITAA 300

Query: 301 LGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPS-SAASFTDEKAAAQELPI--TC 357
           L        ++L S++GA+ IV GLYTVVWGKSKD  S SAA  T+EK    ELPI  T 
Sbjct: 301 LDCGT-NSFLNLFSVIGAVFIVLGLYTVVWGKSKDSTSNSAAPVTNEKNGTLELPISDTN 359

Query: 358 KSINVD-DNNI 367
           KS + +  NN+
Sbjct: 360 KSSSTNFGNNV 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461543|ref|XP_003601053.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355490101|gb|AES71304.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/379 (65%), Positives = 298/379 (78%), Gaps = 8/379 (2%)

Query: 14  LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
           L K KPYLAI+SLQFGY+GMYIITMVS KHGMSH++L+VYRHVVA I++ PFA VLERK 
Sbjct: 16  LRKIKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIITPFALVLERKT 75

Query: 74  RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
           RPK+TLP+FLRI+ALGFLEPVLDQNLY +GMK T+ TFASATVN+LPA+TFI+A+ FRLE
Sbjct: 76  RPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALTFRLE 135

Query: 134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAG-SHHGSSV--DSSDSHFF 190
           +VN R+  S+AKVIGT VTV+GAMVMTLYKGP      GG   +HH S+     S+ ++ 
Sbjct: 136 SVNWRKFHSVAKVIGTVVTVSGAMVMTLYKGPAYQIIKGGGAINHHASATTDQPSEQNWL 195

Query: 191 TGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWK 250
            GT+MLI SC  WAGFFILQSFTLKKYPAELSL+  ICLMG++EG+  SLI ERDMS W 
Sbjct: 196 MGTVMLISSCCSWAGFFILQSFTLKKYPAELSLTAWICLMGIIEGSIASLIFERDMSVWV 255

Query: 251 IGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELV 310
           IG+DSRLLA  YSGV+CSG+AYYVQG V++++GPVFVTSFSPLCMIIT+ALG ++LAE V
Sbjct: 256 IGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQV 315

Query: 311 HLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSIN----VDDNN 366
           HLGSI GAI+IV GLYTVVWGKSKD   SA      ++  Q LPI   + +     D   
Sbjct: 316 HLGSIFGAIIIVIGLYTVVWGKSKDRRESADEIGKGESKDQ-LPIKNGTKSGSEIFDGIE 374

Query: 367 IDGPAGMLKINQAKSTLTQ 385
           I+ PA  LK  +AK+  TQ
Sbjct: 375 INVPAEKLKKGEAKNVPTQ 393

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518533|ref|XP_003527933.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/392 (64%), Positives = 299/392 (76%), Gaps = 14/392 (3%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           M DQ         L K KPYLAI+SLQFGY+GMYIITMVS KHGMSH++L+VYRHVVA I
Sbjct: 106 MEDQNGSGKLSQGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAI 165

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           ++ PFA VLERKIRPK+TLP+FLRI+ALGFLEPVLDQNLY +GMK T+ TFASATVN+LP
Sbjct: 166 IIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLP 225

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAG----- 175
           A+TF++A+IFRLE VN+R+  S+AKVIGT +TV+GAMVMTLYKGP      GG       
Sbjct: 226 AITFVMALIFRLEKVNLRKFHSVAKVIGTLITVSGAMVMTLYKGPAFQIIKGGGAISNHS 285

Query: 176 -SHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVE 234
            S   S+ + SD H+  GT+ LI SC  WAGFFILQSFTLKKYPAELSL+  IC+MG++E
Sbjct: 286 NSSSTSTTEPSDQHWIVGTVYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIE 345

Query: 235 GAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLC 294
           G+  SLI ERD S W IG+DSRLLA  YSGV+CSG+AYYVQG V++++GPVFVTSFSPLC
Sbjct: 346 GSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLC 405

Query: 295 MIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELP 354
           MIIT+ALG ++LAE VHLGSI GAILIV GLYTVVWGKSKD  S+      EK  +QELP
Sbjct: 406 MIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKSTTE---IEKGESQELP 462

Query: 355 ITCKSINVDDNNIDGPAGMLKINQAKSTLTQG 386
           I   + +  D   DG    ++IN     L +G
Sbjct: 463 IKNGTKSASD-IFDG----IEINVPSEVLKKG 489

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248826|ref|NP_001240202.1| uncharacterized protein LOC100811114 [Glycine max] gi|255638183|gb|ACU19405.1| unknown [Glycine max]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/391 (63%), Positives = 299/391 (76%), Gaps = 13/391 (3%)

Query: 1   MGDQTPFVSFCLALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATI 60
           M +Q         L K KPYLAI+SLQFGY+GMYIITMVS KHGMSH++L+VYRHVVA I
Sbjct: 1   MEEQNGSGKLSQGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAI 60

Query: 61  VLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILP 120
           ++ PFA VLERKIRPK+TLP+FLRI+ALGFLEPVLDQNLY +GMK T+ TFASATVN+LP
Sbjct: 61  IIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLP 120

Query: 121 AVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAG----- 175
           A+TF++A++FRLE VN+R+  S+AKVIGT +TV+GAMVMTLYKGP      GG       
Sbjct: 121 AITFVMALVFRLEKVNLRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAMSHHS 180

Query: 176 -SHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVE 234
            S   S+ + SD H+  GT+ LI SC  WAGFFILQSFTLKKYPAELSL+  IC+MG++E
Sbjct: 181 NSSSTSTTEPSDQHWIVGTVYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIE 240

Query: 235 GAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLC 294
           G+  S I ERD S W IG+DSRLLA  YSGV+CSG+AYYVQG V++++GPVFVTSFSPLC
Sbjct: 241 GSIASFIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLC 300

Query: 295 MIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELP 354
           MIIT+ALG ++LAE VHLGSI GAILIV GLYTVVWGKSKD  S+      EK  ++ELP
Sbjct: 301 MIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKSTRE---IEKGESRELP 357

Query: 355 ITCKSINVDD----NNIDGPAGMLKINQAKS 381
           I   + +  D      I+ PA +LK  + K+
Sbjct: 358 IKDGTKSASDIYEGIEINVPAEVLKKGEGKN 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	387
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.940	0.935	0.595	2.3e-119
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.904	0.938	0.645	4.7e-119
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.912	0.954	0.613	5.2e-113
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.886	0.917	0.548	1.4e-96
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.901	0.918	0.522	8.7e-95
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.906	0.914	0.518	4.8e-94
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.847	0.815	0.514	6.3e-92
TAIR|locus:2102629	377	UMAMIT10 "Usually multiple aci	0.813	0.835	0.493	2.7e-84
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.852	0.837	0.461	9.1e-84
TAIR|locus:2049837	336	UMAMIT13 "Usually multiple aci	0.695	0.800	0.5	5.2e-79

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
 Identities = 230/386 (59%), Positives = 291/386 (75%)

Query:    14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
             ++  KPYLA+IS+QFGYAGMYIITMVSLKHGM+HYVLAVYRH +AT V+APFA   ERKI
Sbjct:     6 MNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKI 65

Query:    74 RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
             RPK+T  +FL+I  LGF+EPVLDQNLYY+GM YT+ATFASAT N+LPA+TF+LAIIFRLE
Sbjct:    66 RPKMTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLE 125

Query:   134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINF----------TXXXXXXXXXXXXX 183
             +VN ++++S+AKV+GT +TV+GA++MTLYKGPI++F          +             
Sbjct:   126 SVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAA 185

Query:   184 XXXXXFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIME 243
                  +  GTLML+G  FGWAGFFILQSFTLK+YPAELSL+TLICLMG +EG AVSL+  
Sbjct:   186 AMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTV 245

Query:   244 RDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGV 303
             RD+SAWKIGFDS L AAAYSGV+CSG+AYYVQG V +++GPVFV +F+PLC++IT+ALGV
Sbjct:   246 RDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGV 305

Query:   304 IILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVD 363
             ++L+E +HLGS++G + I+ GLYTVVWGK KD        TD+    + LPI      VD
Sbjct:   306 VVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDK-----RMTDDDEDCKGLPIKSPVKPVD 360

Query:   364 DNNIDGPAGMLKIN-----QAKSTLT 384
                  G A  L++      +AK+T T
Sbjct:   361 TGK--GLAAELEMKSKEGQEAKATTT 384

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 231/358 (64%), Positives = 275/358 (76%)

Query:    14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
             + K KP +AIISLQFGYAGMYIITMVS KHGM+H++LA YRHVVATIV+APFA +LERKI
Sbjct:     6 MDKLKPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKI 65

Query:    74 RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
             RPK+T P+FLRI+ALGFLEP+LDQNLYY+GMK T+AT++SA VN LPA+TFI+A+IFR+E
Sbjct:    66 RPKMTWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query:   134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXX----XXXXXXXXXXXXF 189
             TVN+++ +SLAKVIGTA+TV GAMVMTLYKGP I                         +
Sbjct:   126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNW 185

Query:   190 FTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAW 249
              TGTL ++GS   WAGFFILQSFTLKKYPAELSL   IC MG V     SLIM RD+SAW
Sbjct:   186 VTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAW 245

Query:   250 KIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAEL 309
             K+G DS  LAA YSGVVCSG+AYY+Q  V +++GPVF TSFSP+CMIIT+ LGV++LAE 
Sbjct:   246 KVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEK 305

Query:   310 VHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNI 367
             +HLGSI+GAI IVFGLY+VVWGK+KD   S     +EK   QELPIT  S  V+   I
Sbjct:   306 IHLGSIIGAIFIVFGLYSVVWGKAKDEVISV----EEKIGMQELPITNTSTKVEGGGI 359

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
 Identities = 221/360 (61%), Positives = 268/360 (74%)

Query:    13 ALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERK 72
             ++ K KP LAIISLQFGYAGMYIITMVS KHGM H+VLA YRHVVAT+V+APFA + ERK
Sbjct:     5 SMEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERK 64

Query:    73 IRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRL 132
             IRPK+TL +F R++ALG LEP++DQNLYY+G+K T+A++ SA  N LPAVTFILA+IFRL
Sbjct:    65 IRPKMTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRL 124

Query:   133 ETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFT- 191
             ETVN R++ S+AKV+GT +TV GAM+MTLYKGP I                      +  
Sbjct:   125 ETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQHWVL 184

Query:   192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKI 251
             GT+ ++GS   WA FFILQS+TLK YPAELSL TLIC +G +  A  SLIM RD SAWKI
Sbjct:   185 GTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKI 244

Query:   252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVH 311
             G DS  LAA YSGVVCSGIAYY+Q  V KQ+GPVF TSFSP+CMIIT+ LG ++LAE +H
Sbjct:   245 GMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIH 304

Query:   312 LGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEK--AAAQELPITCKSINVDDNNIDG 369
             LGSI+GA+ IV GLY+VVWGKSKD  +      DEK  A +QELPIT      + +++ G
Sbjct:   305 LGSIIGAVFIVLGLYSVVWGKSKDEVNPL----DEKIVAKSQELPITNVVKQTNGHDVSG 360

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 193/352 (54%), Positives = 249/352 (70%)

Query:    12 LALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLER 71
             +AL  +KP++ ++SLQFGYAG+ II   +L  GMS +VLA YRH+VATI +APFA+ L+R
Sbjct:     1 MALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDR 60

Query:    72 KIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFR 131
             KIRPK+TL +F +I+ LG LEP +DQNLYY GMKYT+ATF +A  N+LPA  FI+A IFR
Sbjct:    61 KIRPKMTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query:   132 LETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFT 191
             LE VNV+++ S AK++GT VTV GAM+MT+ KGP+I                       T
Sbjct:   121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLT 180

Query:   192 --GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSA 248
                +L+ IG C  WAGF  LQ+ TLK YP ELSL+  IC +G +E   V+L +ER + SA
Sbjct:   181 KGASLIAIG-CICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSA 239

Query:   249 WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAE 308
             W I  DS+LLAA Y GV+CSGI YYVQG + K +GPVFVT+F+PL M+I + LG IILAE
Sbjct:   240 WAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAE 299

Query:   309 LVHLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSI 360
             ++ LG ILGAI+IV GLY+V+WGKSKD PSS  SF+D     +ELP++   I
Sbjct:   300 VMFLGRILGAIVIVLGLYSVLWGKSKDEPSS--SFSDMD---KELPLSTPQI 346

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
 Identities = 184/352 (52%), Positives = 247/352 (70%)

Query:    14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
             + K +P+++++ LQ G AGM I++   L  GMS+YVL VYRH VATIV+APFAF  ++K+
Sbjct:    10 MEKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKV 69

Query:    74 RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
             RPK+TL +F +I  LG LEPV+DQNLYYLGMKYTTATFA+A  N+LPA+TF+LA IF LE
Sbjct:    70 RPKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLE 129

Query:   134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFTGT 193
              V +R ++S  KV+GT  TV GAM+MTL KGP+++                         
Sbjct:   130 RVKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAV 189

Query:   194 LMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSAWKIG 252
             L+ IG CF +A F ILQ+ TL+ YPAELSL+  ICLMG +EG AV+L+ME+ + SAW IG
Sbjct:   190 LVTIG-CFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIG 248

Query:   253 FDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHL 312
             +D++LL A YSG+VCS +AYYV G V K +GPVFVT+FSPLCMII + +  II AE ++L
Sbjct:   249 WDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYL 308

Query:   313 GSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSI-NVD 363
             G +LGA++I  GLY V+WGK KD   ++    D+++A  +L ++     NVD
Sbjct:   309 GRVLGAVVICAGLYLVIWGKGKDYKYNSTLQLDDESAQPKLELSGNGKDNVD 360

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
 Identities = 185/357 (51%), Positives = 242/357 (67%)

Query:    14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI 73
             + K +PYL +I LQFG AG YI+ M +L  G + YV+ VYR++VA +VLAPFA + ERK+
Sbjct:     8 MHKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKV 67

Query:    74 RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLE 133
             RPK+TL V  +IMALGFLEPVLDQ   YLGM  T+AT+ SA +NILP+VTFI+A I R+E
Sbjct:    68 RPKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRME 127

Query:   134 TVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXX---XXXXXXXXXXXXXXXFF 190
              VN+  ++S AK+IGT V + GA+VMTLYKGP+I                        + 
Sbjct:   128 KVNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWV 187

Query:   191 TGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWK 250
              GTL+++  C  W+GF++LQS T+K YPA+LSLS LICL G V+  AV+L++ER  S W 
Sbjct:   188 VGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWA 247

Query:   251 IGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELV 310
             +G+D+RL A  Y+G+V SGI YYVQG V K +GPVFVT+F+PLCMI+ + +   IL E +
Sbjct:   248 VGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHEQI 307

Query:   311 HLGSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQELPITCKSINVDDNNI 367
             H G ++G  +I  GLY VVWGK KD   S      EK + QELPIT KS   DDN +
Sbjct:   308 HFGCVIGGAVIAAGLYMVVWGKGKDYEVSGLDIL-EKNSLQELPITTKS--EDDNKL 361

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 174/338 (51%), Positives = 238/338 (70%)

Query:     8 VSFCLA-LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFA 66
             +S C + L+  KPY A+ISLQFGYAGM IIT +SL  GMSHYVL VYRH +AT V+APFA
Sbjct:     6 ISSCESFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFA 65

Query:    67 FVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFIL 126
             F  ERK +PK+T  +F+++  LG L PV+DQN YY+G+KYT+ TF+ A  N+LPA+TFIL
Sbjct:    66 FFFERKAQPKITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFIL 125

Query:   127 AIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPII--------NFTXXXXXXXX 178
             A++FR+E +++++L   AK+ GT VTVAGAM+MT+YKGPI+        +          
Sbjct:   126 AVLFRMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTT 185

Query:   179 XXXXXXXXXXFFTGTLMLIGSCFGWAGFFILQSFTLKKYPA-ELSLSTLICLMGVVEGAA 237
                       F  G+++LI +   WA  F+LQ+  LK Y   +LSL+TLIC +G ++  A
Sbjct:   186 SSKNSSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVA 245

Query:   238 VSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMII 297
             V+ +ME + SAW+IG+D  LLAAAYSG+V S I+YYVQG V K++GPVF T+FSPL M+I
Sbjct:   246 VTFVMEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVI 305

Query:   298 TSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD 335
              + +G  +LAE + LG ++GA+LIV GLY V+WGK K+
Sbjct:   306 VAVMGSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKE 343

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2102629 UMAMIT10 "Usually multiple acids move in and out Transporters 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 157/318 (49%), Positives = 223/318 (70%)

Query:    18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL 77
             KPY A++ LQFGYAGM ++T V L  GMSHYVL  YR+  AT  +APFA + ERK+RPK+
Sbjct:    10 KPYFAMVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRPKM 69

Query:    78 TLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNV 137
             T P+F++I  L  L P++DQNLYY G+K T+ TFA A  NI+PA+TFI++II R+E V +
Sbjct:    70 TFPIFMQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPALTFIISIICRMEKVEM 129

Query:   138 RRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFTGTLMLI 197
             R+++  AKV+GT V V GAM+M L+K P+I F                   +   T+ L+
Sbjct:   130 RKVRFQAKVVGTLVIVVGAMLMILFKIPLITFLRSHLTGHALSPAGED---YLKATVFLL 186

Query:   198 GSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRL 257
              + F WA FF+LQ+ TLK+Y + LSLST++C MG ++  A++ +ME ++SAW IGFD  L
Sbjct:   187 IASFSWASFFVLQAATLKRYSSHLSLSTMVCFMGTLQSTALTFVMEPNLSAWNIGFDMNL 246

Query:   258 LAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILG 317
             LA+AY+G++ S IAYYVQG ++KQK  +FVT+F+PL +II S +G +IL + ++LG +LG
Sbjct:   247 LASAYAGIMSSSIAYYVQGMMTKQKSVIFVTAFNPLVVIIGSIIGFLILNQTLNLGGVLG 306

Query:   318 AILIVFGLYTVVWGKSKD 335
               ++V G+ TV+WGK  D
Sbjct:   307 MAILVVGVCTVLWGKEGD 324

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 154/334 (46%), Positives = 222/334 (66%)

Query:    18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL 77
             KPY A++ LQFGYAGM ++T   L  GMSHYVL  YR+  AT  +APFA + ERK+R K+
Sbjct:    10 KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKM 69

Query:    78 TLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNV 137
             T P+F+RI  L  L PV+DQNLYY+G+K T+ TF+SA  NI+PA+T ILA +FR+E V +
Sbjct:    70 TFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEM 129

Query:   138 RRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFTGTLMLI 197
             R+++ L KV+GT VTV G+++M  YKGP INF                   +    + L+
Sbjct:   130 RKVRCLVKVMGTLVTVVGSILMIFYKGPFINF----FRSHLTAASSPPTADYLKAAVFLL 185

Query:   198 GSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRL 257
              +   WA FF+LQ+ TLKKY A LS+ST++C MG ++  A++ +ME + SA  IGFD  L
Sbjct:   186 LASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNL 245

Query:   258 LAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILG 317
             LA+AY+G++ S IAYYVQG + ++KGPVFVT+F+PL ++I S +   +L + ++LG ++G
Sbjct:   246 LASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIG 305

Query:   318 AILIVFGLYTVVWGKSKDPPSSAASFTDEKAAAQ 351
              ++++ G+Y V+WGK  D         D   A +
Sbjct:   306 VVVLMVGVYAVLWGKHVDDDGEETRHEDNVVAVK 339

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049837 UMAMIT13 "Usually multiple acids move in and out Transporters 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 654 (235.3 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
 Identities = 136/272 (50%), Positives = 174/272 (63%)

Query:    81 VFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRL 140
             V +   A  F  PV+ QNL+ LGMKYTTATFA A  N LPAVTFILA+IFRLE+V  + +
Sbjct:    50 VVMAPFAFYFDNPVIAQNLFNLGMKYTTATFAIALYNTLPAVTFILALIFRLESVKFQSI 109

Query:   141 QSLAKVIGTAVTVAGAMVMTLYKGPIINFTXXXXXXXXXXXXXXXXXXFFTGTLMLIGSC 200
             +S AKV+GT  TV G MVMTL KGP ++                         L+ IG C
Sbjct:   110 RSAAKVVGTVTTVGGIMVMTLVKGPALDLFWTKGPSAQNTVGTDIHSSIKGAVLVTIG-C 168

Query:   201 FGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSAWKIGFDSRLLA 259
             F +A F ILQ+ TLK YPAELSL+T ICL+G +EG  V+L+ME+ + S W IG+D++LL 
Sbjct:   169 FSYACFMILQAITLKTYPAELSLATWICLIGTIEGVVVALVMEKGNPSVWAIGWDTKLLT 228

Query:   260 AAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAI 319
               YSG+VCS + YY+ G V K +GPVFVT+F PLCMI+ + +  II  E ++LG  LGA 
Sbjct:   229 ITYSGIVCSALGYYIGGVVMKTRGPVFVTAFKPLCMIVVAIMSSIIFDEQMYLGRALGAT 288

Query:   320 LIVFGLYTVVWGKSKDPP-SSAASFTDEKAAA 350
             +I  GLY V+WGK+KD    S     D+ A A
Sbjct:   289 VICVGLYLVIWGKAKDYEYPSTPQIDDDLAQA 320

GO:0016020 "membrane" evidence=IEA

GO:0016556 "mRNA modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q501F8	WTR32_ARATH	No assigned EC number	0.6356	0.9379	0.9731	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00015369001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (391 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	387
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	5e-44
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	7e-09
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	2e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  155 bits (394), Expect = 5e-44
 Identities = 102/335 (30%), Positives = 182/335 (54%), Gaps = 15/335 (4%)

Query: 22  AIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLER-KIRPKLTLP 80
           A+++ +    G+  +  V+   G++ Y    Y +++A+++L P  F   R +  P L++ 
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 81  VFLRIMALGFLEPVLDQNLY----YLGMKYTTATFASATVNILPAVTFILAIIFRLETVN 136
           +  +I  LGFL      ++Y    Y+G++Y+  T ASA  NI PA+TFILAIIFR+E V+
Sbjct: 77  ILSKIGLLGFL-----GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVS 131

Query: 137 VRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAG---SHHGSSVDSSDSHFFTGT 193
            +   S+AKV+GT +++ GA+V+  Y GP +   S             + SS+S +  G 
Sbjct: 132 FKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGG 191

Query: 194 LMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDM-SAWKIG 252
            +L       +  FILQ+  + +YPA  ++S L  +   +  + + L++E++  S W I 
Sbjct: 192 ALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIH 251

Query: 253 FDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHL 312
           FD  L+      ++ S + Y +  +  + KGP+++  F PL ++I   +G I L + ++L
Sbjct: 252 FDITLITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL 310

Query: 313 GSILGAILIVFGLYTVVWGKSKDPPSSAASFTDEK 347
           G ++G ILI  G Y V+WGK+ +      SF+ ++
Sbjct: 311 GCLIGGILITLGFYAVMWGKANEEKDQLLSFSGKE 345

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 56.0 bits (135), Expect = 7e-09
 Identities = 67/315 (21%), Positives = 125/315 (39%), Gaps = 32/315 (10%)

Query: 20  YLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTL 79
            LA++     +   +I   ++++        A  R ++A ++L P   +  R +RP L  
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRP 68

Query: 80  PVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRR 139
            + L  + L  L   L   L +L +KYT+A+ AS  + +LP  T +LA++  L       
Sbjct: 69  WLLL--LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL-----GE 121

Query: 140 LQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGS 199
             SL +++G  + +AG +++ L                              G L+ + +
Sbjct: 122 RLSLLQILGILLALAGVLLILL-------------------GGGGGGILSLLGLLLALAA 162

Query: 200 CFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLA 259
              WA +  L     +  P  L+L   + L  ++            + +         L 
Sbjct: 163 ALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAW------LL 216

Query: 260 AAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAI 319
             Y GV  +G+AY +  +  +  G   V   S L  +  + LGV++L E +    +LGA 
Sbjct: 217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAA 276

Query: 320 LIVFGLYTVVWGKSK 334
           L+V G+        +
Sbjct: 277 LVVLGVLLASLRARR 291

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 54/293 (18%), Positives = 108/293 (36%), Gaps = 39/293 (13%)

Query: 34  YIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP 93
            ++    L+  +  Y     R + A ++L P         R         R++ LG L+ 
Sbjct: 5   GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRRPPLKRLL-------RLLLLGALQI 57

Query: 94  VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTV 153
            +   LY++ +K      A+  + + P    +L+ +   E      L      +   + +
Sbjct: 58  GVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVL------LAAVLGL 111

Query: 154 AGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFT 213
           AG  V+ L  G +                    S    G L+ +GS   +A   +L    
Sbjct: 112 AG-AVLLLSDGNL--------------------SINPAGLLLGLGSGISFALGTVLYKRL 150

Query: 214 LKKYPAELSLSTLICLM-GVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAY 272
           +KK   EL   T   L+ G +     +  +  +  A  + +     A  Y G++ + +AY
Sbjct: 151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQW----GALLYLGLIGTALAY 206

Query: 273 YVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGL 325
           ++         P   +  +    ++   LG++IL E + L  ++G  LI+  +
Sbjct: 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 7/130 (5%)

Query: 32  GMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFL 91
            +Y +    L   +S      YR ++A I+L      L RK    L+L   L ++ LG  
Sbjct: 4   ALYFVFSKKLLERISPLTFTAYRFLIAGILLI-LLLFLLRKPFALLSLKAILALLYLGLF 62

Query: 92  EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAV 151
              L   LY+  +KY +A+ AS   ++ P  T IL+++   E +       L +++G  +
Sbjct: 63  GTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLT------LKQLLGIVL 116

Query: 152 TVAGAMVMTL 161
            + G +++ L
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 24/130 (18%), Positives = 56/130 (43%), Gaps = 4/130 (3%)

Query: 201 FGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAA 260
             WA +F+     L++    L+ +    L+  +    +  ++ +  +   +     +LA 
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGILLILLLFLLRKPFALLSLKA---ILAL 56

Query: 261 AYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAIL 320
            Y G+  + + Y +  +  K       +  + L  + T  L V++L E + L  +LG +L
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 321 IVFGLYTVVW 330
           I+ G+  ++ 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	387
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.93
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
COG2962	293	RarD Predicted permeases [General function predict	99.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.88
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.85
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.77
KOG2766	336	consensus Predicted membrane protein [Function unk	99.68
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.67
KOG1580	337	consensus UDP-galactose transporter related protei	99.63
COG2510	140	Predicted membrane protein [Function unknown]	99.63
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.59
KOG1581	327	consensus UDP-galactose transporter related protei	99.58
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.58
COG2510	140	Predicted membrane protein [Function unknown]	99.58
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.55
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.49
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.41
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.36
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.27
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.27
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.23
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.21
KOG1582	367	consensus UDP-galactose transporter related protei	99.2
PRK13499	345	rhamnose-proton symporter; Provisional	99.19
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.18
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.16
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.14
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.08
PRK15430	296	putative chloramphenical resistance permease RarD;	99.07
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.06
PRK11272	292	putative DMT superfamily transporter inner membran	99.05
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.02
PLN00411	358	nodulin MtN21 family protein; Provisional	98.96
PRK11689	295	aromatic amino acid exporter; Provisional	98.93
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.87
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.81
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.79
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.76
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.75
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.69
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.65
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.57
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.48
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.47
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.46
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.46
COG2962	293	RarD Predicted permeases [General function predict	98.42
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.36
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.31
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.17
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.97
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.93
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.92
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.76
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.64
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.6
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.55
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.46
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.41
COG2076	106	EmrE Membrane transporters of cations and cationic	97.4
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.38
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.35
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.33
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.33
PRK11431	105	multidrug efflux system protein; Provisional	97.24
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.22
PRK11431	105	multidrug efflux system protein; Provisional	97.21
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.19
COG2076	106	EmrE Membrane transporters of cations and cationic	97.13
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.07
PRK13499	345	rhamnose-proton symporter; Provisional	97.02
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.01
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.93
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.92
KOG2765	416	consensus Predicted membrane protein [Function unk	96.92
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.62
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.56
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.53
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.06
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.92
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.64
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.6
KOG1581	327	consensus UDP-galactose transporter related protei	94.39
KOG1443	349	consensus Predicted integral membrane protein [Fun	93.27
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.08
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.06
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.9
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.59
KOG1580	337	consensus UDP-galactose transporter related protei	91.42
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.57
KOG4831	125	consensus Unnamed protein [Function unknown]	86.71
KOG2766	336	consensus Predicted membrane protein [Function unk	85.69
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	85.41
PRK13108	460	prolipoprotein diacylglyceryl transferase; Reviewe	84.21
PRK02237	109	hypothetical protein; Provisional	82.75
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	82.71
KOG4831	125	consensus Unnamed protein [Function unknown]	82.55
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	81.98

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=4.3e-37  Score=291.19  Aligned_cols=318  Identities=31%  Similarity=0.548  Sum_probs=251.9

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHh
Q 016580           13 ALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLER-KIRPKLTLPVFLRIMALGFL   91 (387)
Q Consensus        13 ~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~   91 (387)
                      ..|+.++++.+++..+.++...++.|.+++.+++|+.+.++|+.++.++++++.++++| +.+++.+++++..+.+.|++
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence            45678999999999999999999999999899999999999999999999999877654 33444567888889999999


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHh------ccccceeeccccchhhHHHHHhhhhhhhhhccCc
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFR------LETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGP  165 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l------~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~  165 (387)
                      + ..++.+++.|++|+++++++++.++.|+++.+++++++      |||++++      |++|++++++|+.++...+++
T Consensus        88 g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~  160 (358)
T PLN00411         88 G-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGP  160 (358)
T ss_pred             H-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCc
Confidence            8 78888999999999999999999999999999999994      6666666      799999999999998754442


Q ss_pred             cccccC--CCCCCCCCCC-CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 016580          166 IINFTS--GGAGSHHGSS-VDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIM  242 (387)
Q Consensus       166 ~~~~~~--~~~~~~~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  242 (387)
                      .....+  ...|..+... ......+...|++++++++++||+|++.+|+..++++++...++++..++.+...+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~  240 (358)
T PLN00411        161 RVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVV  240 (358)
T ss_pred             ccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHH
Confidence            110000  0000000000 0111223456999999999999999999999999987666777788888877777666655


Q ss_pred             ccC-cccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHH
Q 016580          243 ERD-MSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILI  321 (387)
Q Consensus       243 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li  321 (387)
                      +.. ...|..........++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LI  319 (358)
T PLN00411        241 EKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILI  319 (358)
T ss_pred             ccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence            432 222322222234557777875 678999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhheeeccCCCCCC
Q 016580          322 VFGLYTVVWGKSKDPPS  338 (387)
Q Consensus       322 ~~g~~l~~~~~~~~~~~  338 (387)
                      +.|+.+..+.++++.+.
T Consensus       320 l~Gv~l~~~~~~~~~~~  336 (358)
T PLN00411        320 TLGFYAVMWGKANEEKD  336 (358)
T ss_pred             HHHHHHHHhhhhhhhhh
Confidence            99999988766554333

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=1.2e-31  Score=249.78  Aligned_cols=280  Identities=19%  Similarity=0.191  Sum_probs=233.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHH
Q 016580           19 PYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQN   98 (387)
Q Consensus        19 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   98 (387)
                      -.+..++..++||.+++..|... ++++|..++++|+.++.++++++...+++ +  ..+++++......|.+....++.
T Consensus         9 ~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          9 LFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHHHHHHHHHHHHHHHHHHH
Confidence            45667888999999999999985 79999999999999999999888754322 2  22467788888888887678889


Q ss_pred             HHHHhh-hccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCC
Q 016580           99 LYYLGM-KYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSH  177 (387)
Q Consensus        99 ~~~~al-~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~  177 (387)
                      +++.+. ++++++.++++.++.|+++.+++.+ +|||++++      +++|++++++|++++...+              
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~~--------------  143 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSGG--------------  143 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcCc--------------
Confidence            999999 9999999999999999999999985 69999999      5999999999999875221              


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhH
Q 016580          178 HGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRL  257 (387)
Q Consensus       178 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  257 (387)
                             ..+....|++++++++++||.|.+..|+..++ + +.....+++..+.+.+.+.....+.....  ..+...|
T Consensus       144 -------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  212 (292)
T PRK11272        144 -------NLSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGF  212 (292)
T ss_pred             -------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHH
Confidence                   11234579999999999999999999987543 3 45567788888888877766543322111  1233578


Q ss_pred             HHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          258 LAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       258 ~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      ..+++.+++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+++.++.+++
T Consensus       213 ~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        213 LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999998765543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=3.5e-31  Score=247.55  Aligned_cols=279  Identities=19%  Similarity=0.257  Sum_probs=217.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHH
Q 016580           20 YLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNL   99 (387)
Q Consensus        20 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   99 (387)
                      .++.++++++||.++++.|..+ ++++|..+.++|+.++++.++++..   ++   +.+++   .....|++....+..+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~~---~~~~~g~~~~~~~~~~   75 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVA---RP---KVPLN---LLLGYGLTISFGQFAF   75 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhc---CC---CCchH---HHHHHHHHHHHHHHHH
Confidence            4568899999999999999996 7899999999999998877665541   11   11222   2344456554566678


Q ss_pred             HHHhhhc-cCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCC
Q 016580          100 YYLGMKY-TTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHH  178 (387)
Q Consensus       100 ~~~al~~-~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~  178 (387)
                      ++.++++ .+++.++++.++.|+++.+++++++|||++.+      ++++++++++|+.++...+.              
T Consensus        76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~~~--------------  135 (299)
T PRK11453         76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIEDSL--------------  135 (299)
T ss_pred             HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccccC--------------
Confidence            8899998 58899999999999999999999999999999      59999999999998863210              


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCc--hHHHHHHHHHHHHHHHHHHHHhccCc---ccccccc
Q 016580          179 GSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAE--LSLSTLICLMGVVEGAAVSLIMERDM---SAWKIGF  253 (387)
Q Consensus       179 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~  253 (387)
                           ........|+++++.++++|+.|.++.|+..++.+.+  .....+....+.+.........+...   ..+...+
T Consensus       136 -----~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (299)
T PRK11453        136 -----NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTID  210 (299)
T ss_pred             -----CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCC
Confidence                 1112235799999999999999999999987665432  23344444454444433333333211   1111223


Q ss_pred             hhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          254 DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       254 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      ...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|+++..+.++
T Consensus       211 ~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        211 MTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999998876654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=8.1e-31  Score=244.28  Aligned_cols=282  Identities=12%  Similarity=0.106  Sum_probs=225.9

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHH
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP   93 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (387)
                      .++.+++.++++++++|+.++.+.|+.+ ++++|..+.++|+.++.++++++...  ++  .+.++++++..+..|.+. 
T Consensus         8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-   81 (293)
T PRK10532          8 LPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-   81 (293)
T ss_pred             cccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-
Confidence            4557899999999999999999999996 67999999999999999998876532  11  123567777788888876 


Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCC
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      +..+.+++++++++|++.++++..+.|+++.+++.    |++.        +..++.++++|++++...+.         
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~~~~---------  140 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLPLGQ---------  140 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeeecCC---------
Confidence            88889999999999999999999999999988763    4433        25567788999988752111         


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q 016580          174 AGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGF  253 (387)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  253 (387)
                                ...+.+..|+++.++++++||.|.+..|+..++++ +... .+...++++++.++....+. ...+   +
T Consensus       141 ----------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~---~  204 (293)
T PRK10532        141 ----------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EALW---H  204 (293)
T ss_pred             ----------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-cccC---C
Confidence                      11223457999999999999999999999887765 5554 45666677677766644322 1111   2


Q ss_pred             hhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          254 DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       254 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      ...|..+++++++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|++...+..+
T Consensus       205 ~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        205 WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            23566678999999999999999999999999999999999999999999999999999999999999999999887765


Q ss_pred             CCCCC
Q 016580          334 KDPPS  338 (387)
Q Consensus       334 ~~~~~  338 (387)
                      ++.|-
T Consensus       285 ~~~~~  289 (293)
T PRK10532        285 REPKI  289 (293)
T ss_pred             CCCCC
Confidence            54333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=4e-31  Score=246.56  Aligned_cols=285  Identities=12%  Similarity=0.052  Sum_probs=215.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVL   95 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   95 (387)
                      +.++++++++++++||.+++..|..+ ++++|..+.++|+.++.++++++.   +++++++    ..++....+.+....
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~----~~~~~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ----FPKRYLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---ccccccc----ccHHHHHHHhHHHHH
Confidence            34678899999999999999999995 889999999999999999988763   1211111    122234455555577


Q ss_pred             HHHHHHHhhhc----cCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccC
Q 016580           96 DQNLYYLGMKY----TTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTS  171 (387)
Q Consensus        96 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~  171 (387)
                      ++.+++.++++    .++++++++.++.|+++.+++++++|||++++      |++|++++++|+.++...+...     
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~~~~-----  142 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGDNGL-----  142 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCCccc-----
Confidence            88888887764    57788899999999999999999999999999      5999999999999986322100     


Q ss_pred             CCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 016580          172 GGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKI  251 (387)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  251 (387)
                         +.+  +. .........|++++++|+++||.|+++.|+..++++ +....   ...+.+.+.+.....+..  ....
T Consensus       143 ---~~~--~~-~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~~~~~--~~~~  210 (295)
T PRK11689        143 ---SLA--EL-INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFLSPQP--AMVF  210 (295)
T ss_pred             ---hhh--hh-hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHHhcCc--cccC
Confidence               000  00 001112356999999999999999999999876654 45432   223333333333322211  1112


Q ss_pred             cchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       252 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                       +...|..+++.++ +++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.
T Consensus       211 -~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        211 -SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             -CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence             2346777778775 68999999999999999999999999999999999999999999999999999999999887655


Q ss_pred             cC
Q 016580          332 KS  333 (387)
Q Consensus       332 ~~  333 (387)
                      ++
T Consensus       289 ~~  290 (295)
T PRK11689        289 TR  290 (295)
T ss_pred             Hh
Confidence            43

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=2.2e-30  Score=241.74  Aligned_cols=281  Identities=13%  Similarity=0.047  Sum_probs=209.9

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCCHHHHHHHHHHH
Q 016580           13 ALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIR---PKLTLPVFLRIMALG   89 (387)
Q Consensus        13 ~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g   89 (387)
                      ++++.+|++++++++++||.++++.|..  ++++|.++.++|..++.++++++...+++...   ...+++.+. ....+
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVS   79 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHH
Confidence            3466789999999999999999999986  57999999999999999888877654322110   011233333 34466


Q ss_pred             HhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccc
Q 016580           90 FLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINF  169 (387)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~  169 (387)
                      .+..+.++.++++|++++++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++...++     
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~-----  148 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG-----  148 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC-----
Confidence            6666889999999999999999999999999999999999999999999      59999999999999852211     


Q ss_pred             cCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccCccc
Q 016580          170 TSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERDMSA  248 (387)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  248 (387)
                                       +.    ..+.++++++||.|.+..|+..++.. .......+....+.....+..   ......
T Consensus       149 -----------------~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  204 (296)
T PRK15430        149 -----------------SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSH  204 (296)
T ss_pred             -----------------Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCccc
Confidence                             00    14678899999999999888643211 112223333333333322111   111111


Q ss_pred             ccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          249 WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       249 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                      +...+...+..++..++ .+.+++.++++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+.
T Consensus       205 ~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~  283 (296)
T PRK15430        205 MGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF  283 (296)
T ss_pred             ccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            11112222334444555 58899999999999999999999999999999999999999999999999999999988777


Q ss_pred             eecc
Q 016580          329 VWGK  332 (387)
Q Consensus       329 ~~~~  332 (387)
                      ..+.
T Consensus       284 ~~~~  287 (296)
T PRK15430        284 VMDA  287 (296)
T ss_pred             HHHH
Confidence            6443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=6.1e-30  Score=234.70  Aligned_cols=259  Identities=19%  Similarity=0.239  Sum_probs=219.8

Q ss_pred             HHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCc
Q 016580           30 YAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTA  109 (387)
Q Consensus        30 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  109 (387)
                      ||.+++..|..++++.++....+.|..++.+++.++...+       .+++++.+.+..|.++..+++.++++|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999976678999999999999988887765432       235667778888888889999999999999999


Q ss_pred             hhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCch
Q 016580          110 TFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHF  189 (387)
Q Consensus       110 ~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (387)
                      ++++++.++.|+++.+++.+++|||++++      |++|+.++++|++++.. ++                    ..+.+
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~--------------------~~~~~  126 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG--------------------NLSIN  126 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC--------------------ccccc
Confidence            99999999999999999999999999999      59999999999999852 21                    11345


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccCCC-chHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhh
Q 016580          190 FTGTLMLIGSCFGWAGFFILQSFTLKKYPA-ELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCS  268 (387)
Q Consensus       190 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  268 (387)
                      ..|+.++++++++|+.+.++.|+..++.+. +.....+.+..+.+.+.+.....+... .+   +...|..+++.+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence            689999999999999999999998877552 234444678888888888766543321 11   3347778899999889


Q ss_pred             hHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhh
Q 016580          269 GIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLY  326 (387)
Q Consensus       269 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~  326 (387)
                      .+++.++++++++.++.+++.+.+++|+++.++++++++|++++.+++|+++++.|++
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999863

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=7.4e-29  Score=232.37  Aligned_cols=284  Identities=10%  Similarity=0.074  Sum_probs=220.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHH
Q 016580           22 AIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYY  101 (387)
Q Consensus        22 ~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  101 (387)
                      +.++.-++-....+..|+.+++...|..+++.|+.++.+...+.. ....+++++.++++++..+..|++. ++++.+.+
T Consensus         6 ~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~   83 (302)
T TIGR00817         6 LFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence            344444555555678899974347799999999999887765552 1122334456788999999999997 89999999


Q ss_pred             HhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCC
Q 016580          102 LGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSS  181 (387)
Q Consensus       102 ~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~  181 (387)
                      ++++|++++.++++.++.|+++.+++++++|||++++      ++.+++++++|+.+... +                  
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~-~------------------  138 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD-T------------------  138 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC-C------------------
Confidence            9999999999999999999999999999999999999      59999999999987531 1                  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHHHHhccCcc---cccc-----
Q 016580          182 VDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLK--KYPAELSLSTLICLMGVVEGAAVSLIMERDMS---AWKI-----  251 (387)
Q Consensus       182 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~-----  251 (387)
                         ..+....|+++.++++++|++|.++.|+..+  +++ +...+.+++..+.+.++|.....+....   .+..     
T Consensus       139 ---~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~  214 (302)
T TIGR00817       139 ---ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGV  214 (302)
T ss_pred             ---cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhccc
Confidence               1123467999999999999999999999887  555 7899999999999999998765543111   0100     


Q ss_pred             cchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       252 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      .....+...+..+..+....+.+++.++++.+|++.+++.+++|+++++++++++||+++..+++|+++++.|++++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       215 NVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            00111221223333223333346668999999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCC
Q 016580          332 KSKDP  336 (387)
Q Consensus       332 ~~~~~  336 (387)
                      |++++
T Consensus       295 k~~~~  299 (302)
T TIGR00817       295 KAQKP  299 (302)
T ss_pred             hccCc
Confidence            54433

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=7.1e-27  Score=216.59  Aligned_cols=274  Identities=15%  Similarity=0.131  Sum_probs=202.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhh-hcCCCCCCHHHHHHHHHHHHhHHHHHHH
Q 016580           20 YLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLE-RKIRPKLTLPVFLRIMALGFLEPVLDQN   98 (387)
Q Consensus        20 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   98 (387)
                      .++.++++++|+..++..|... ++-++.  .+++...+.++++++...+. +..++..+++ ++...+.+.+....++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence            5678999999999999999663 443443  47777777878888776532 2333433334 44444555555589999


Q ss_pred             HHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCC
Q 016580           99 LYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHH  178 (387)
Q Consensus        99 ~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~  178 (387)
                      ++++|+++.+++.++++.++.|+++.+++++++||+++.+      +++|+.++++|+.++...+               
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~---------------  137 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSR---------------  137 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhccc---------------
Confidence            9999999999999999999999999999999999999999      5999999999999886321               


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchH---HHHHHHHHHHHHHHHHHHHhccCcccccccchh
Q 016580          179 GSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELS---LSTLICLMGVVEGAAVSLIMERDMSAWKIGFDS  255 (387)
Q Consensus       179 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  255 (387)
                            ....+..|+.+.++++++|+.|.+..|+..++.++...   ...+......+...+.....+.  ..+.. ...
T Consensus       138 ------~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~  208 (281)
T TIGR03340       138 ------FAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG--RSMFP-YAR  208 (281)
T ss_pred             ------ccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc--cchhh-hHH
Confidence                  11123468889999999999999998876544332111   2222222221111121111111  11111 223


Q ss_pred             hHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhh
Q 016580          256 RLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYT  327 (387)
Q Consensus       256 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l  327 (387)
                      .++..++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+.+
T Consensus       209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            455667778778999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=3.2e-26  Score=212.62  Aligned_cols=302  Identities=16%  Similarity=0.167  Sum_probs=238.8

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHh
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMS-HYVLAVYRHVVATIVLAPFAFVLERK-IRPKLTLPVFLRIMALGFL   91 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~   91 (387)
                      ++.++..++.=+.+++-..+.+.+...-+++.+ |....++.++.-.++..++..+++++ ++.+..+++|++.++.+++
T Consensus         9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~   88 (334)
T PF06027_consen    9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH
Confidence            445566666666777777777777777445555 88888888888888877776665432 2333345677888888988


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccC
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTS  171 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~  171 (387)
                      . ..++.+.+.|++|++.+.++++.++..+++++++++++|+|+++.      |++|++++++|+.++...+...     
T Consensus        89 D-v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~-----  156 (334)
T PF06027_consen   89 D-VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS-----  156 (334)
T ss_pred             H-HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc-----
Confidence            8 899999999999999999999999999999999999999999999      6999999999999987654321     


Q ss_pred             CCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccC-ccccc
Q 016580          172 GGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERD-MSAWK  250 (387)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~  250 (387)
                              +.+....++...|++++++|++.||+++++.++..++.+ ......+..+++.++..+...+.|.+ ....+
T Consensus       157 --------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~  227 (334)
T PF06027_consen  157 --------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH  227 (334)
T ss_pred             --------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence                    111234566789999999999999999999999999876 68888899999999998888777653 22222


Q ss_pred             ccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          251 IGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       251 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      +.+. .+..++.- .++.++-|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|++|.+++..
T Consensus       228 w~~~-~~~~~v~~-~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  228 WTSQ-VIGLLVGY-ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             CChh-hHHHHHHH-HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEc
Confidence            2222 22222222 334677788888999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCC
Q 016580          331 GKSKDPPS  338 (387)
Q Consensus       331 ~~~~~~~~  338 (387)
                      .+.+..++
T Consensus       306 ~~~~~~~~  313 (334)
T PF06027_consen  306 AESPEEEA  313 (334)
T ss_pred             cCCccccc
Confidence            76654433

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=5.3e-26  Score=216.34  Aligned_cols=284  Identities=14%  Similarity=0.145  Sum_probs=223.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHhH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLKHGMS-HYVLAVYRHVVATIVLAPFAFVLERKIRPKL--TLPVFLRIMALGFLE   92 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   92 (387)
                      +.+..++.+..-.+-.......|.++ +.++ |..++.+|++++.++..++... +.+++++.  .+++++..+..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            55666777777777777888899997 6789 9999999999998876555332 22222333  245778888999998


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCC
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG  172 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~  172 (387)
                       ...+...+.|+++++++.++++..+.|+++++++++++|||++++      ++.+++++++|+++.+..          
T Consensus       125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~----------  187 (350)
T PTZ00343        125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVK----------  187 (350)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheecc----------
Confidence             445666789999999999999999999999999999999999999      599999999999998631          


Q ss_pred             CCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC------CchHHHHHHHHHHHHHHHHHHHHhccCc
Q 016580          173 GAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP------AELSLSTLICLMGVVEGAAVSLIMERDM  246 (387)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~  246 (387)
                                  ..+.+..|++++++|+++|++|+++.|+..++.+      ++.....++...+.++++|+....+...
T Consensus       188 ------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~  255 (350)
T PTZ00343        188 ------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKK  255 (350)
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence                        1133577999999999999999999999887542      2445566668899999999876554311


Q ss_pred             --cccc----ccchhhHHHHHHhhhhhhhHHHHHHHH----HHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhh
Q 016580          247 --SAWK----IGFDSRLLAAAYSGVVCSGIAYYVQGF----VSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSIL  316 (387)
Q Consensus       247 --~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~  316 (387)
                        ..+.    ......+..+++. ++.+++++++++.    ++++++|.+.++..+++|+++++++++++||++|+.+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~i  334 (350)
T PTZ00343        256 WVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYL  334 (350)
T ss_pred             HHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHH
Confidence              1110    0011122334443 4457888888885    999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhheeec
Q 016580          317 GAILIVFGLYTVVWG  331 (387)
Q Consensus       317 G~~li~~g~~l~~~~  331 (387)
                      |+++++.|++++++.
T Consensus       335 G~~lii~Gv~lYs~~  349 (350)
T PTZ00343        335 GMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999998764

>TIGR00688 rarD rarD protein

Probab=99.94  E-value=3.4e-25  Score=202.67  Aligned_cols=248  Identities=12%  Similarity=0.072  Sum_probs=184.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHH-HHHHHHHHHh
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERK-----IRPKLTLPV-FLRIMALGFL   91 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~   91 (387)
                      +|++++++++++||.++++.|..  .+++|.+++++|++++.++++++...++++     ..++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            58999999999999999999995  469999999999999998887776443321     111112232 3345666666


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccC
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTS  171 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~  171 (387)
                      . +.++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|+.++...++       
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~-------  145 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG-------  145 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence            5 899999999999999999999999999999999999999999999      59999999999998853211       


Q ss_pred             CCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 016580          172 GGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKI  251 (387)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  251 (387)
                                     +..    .++++++++|+.|.+..|+..++ + ..... ...........+.....+. ......
T Consensus       146 ---------------~~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~  202 (256)
T TIGR00688       146 ---------------SLP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFC-LETLSLMPVAIYYLLQTDF-ATVQQT  202 (256)
T ss_pred             ---------------Cch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHH-HHHHHHHHHHHHHHHHhcc-Cccccc
Confidence                           011    35788999999999999986543 3 22211 1111222222211111111 111111


Q ss_pred             cchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHH
Q 016580          252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVII  305 (387)
Q Consensus       252 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~  305 (387)
                      .+...|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.++
T Consensus       203 ~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       203 NPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             CchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            122478888888886 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.93  E-value=4.7e-23  Score=191.60  Aligned_cols=282  Identities=23%  Similarity=0.349  Sum_probs=217.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHG-MSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP   93 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (387)
                      +...+....++.++.|+......|... ++ .++....+.|...+.++..+.........++.  .+.+++....+.+..
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   80 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPA--LRPWLLLLLLALLGL   80 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhccccccc--ccchHHHHHHHHHHH
Confidence            345678888888899999999999995 55 67777777799999888443432211111121  122455666677777


Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHH-HHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCC
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAI-IFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG  172 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~-~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~  172 (387)
                      ..++.+++.++++++++.++++.++.|+++.++++ +++|||++++      ++.++.++++|++++...++..      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------  148 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------  148 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc------
Confidence            99999999999999999999999999999999997 7779999999      5999999999999997433211      


Q ss_pred             CCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH-HHHHHHHHHHHHHHHHhccCcccccc
Q 016580          173 GAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLST-LICLMGVVEGAAVSLIMERDMSAWKI  251 (387)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~  251 (387)
                                  ... ...|+.+.+.++++|+.+.+..|+.. +.+ +..... ++.........+..  .....   ..
T Consensus       149 ------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~  208 (292)
T COG0697         149 ------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFF--LSGFG---AP  208 (292)
T ss_pred             ------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHH--hcccc---cc
Confidence                        111 67899999999999999999999987 433 445444 33331121112211  11111   11


Q ss_pred             cchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       252 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      .....|..+.+.+++++++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.+...+
T Consensus       209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            23357888999999888899999999999999999999999999999999999999999999999999999999988766

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=8.3e-23  Score=175.89  Aligned_cols=277  Identities=17%  Similarity=0.126  Sum_probs=230.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQ   97 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   97 (387)
                      .+++.++.+.+.--....+.|..+ +..+|...+.+|..+++++++++..-.    +.+..++++......|+.. +..|
T Consensus        12 ~p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsL-g~MN   85 (292)
T COG5006          12 LPILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSL-GGMN   85 (292)
T ss_pred             ccHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHH-HHHH
Confidence            378888999999999999999997 889999999999999999998886432    2345678899999999998 8999


Q ss_pred             HHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCC
Q 016580           98 NLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSH  177 (387)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~  177 (387)
                      .+||.+++..|.+.+..+.++.|+.+++++-   |+   .++      .+.+.+++.|+.++.- .+             
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~s---Rr---~~d------~vwvaLAvlGi~lL~p-~~-------------  139 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSS---RR---LRD------FVWVALAVLGIWLLLP-LG-------------  139 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhc---cc---hhh------HHHHHHHHHHHHhhee-cc-------------
Confidence            9999999999999999999999998877653   22   122      5667788999988852 22             


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhH
Q 016580          178 HGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRL  257 (387)
Q Consensus       178 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  257 (387)
                           .+....+..|..+++.++.+|+.|.+..+|..+..+ ..+....-+.++.++.+|+...... +..+   .+...
T Consensus       140 -----~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag-~~l~---~p~ll  209 (292)
T COG5006         140 -----QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG-PALF---SPSLL  209 (292)
T ss_pred             -----CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc-hhhc---ChHHH
Confidence                 134567789999999999999999999999886544 4677888899999999998864322 1112   22356


Q ss_pred             HHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCCC
Q 016580          258 LAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDP  336 (387)
Q Consensus       258 ~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~~  336 (387)
                      ..-+.++++++.+.|.+-..++++.++..-+.+..++|.++.+.|++++||.+|+.||+|++.|+.+..-.++..+|+.
T Consensus       210 ~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         210 PLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            6777889999999999999999999999999999999999999999999999999999999999999887776655543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.89  E-value=2e-21  Score=172.07  Aligned_cols=281  Identities=15%  Similarity=0.100  Sum_probs=225.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcC--CC-CCCHHHHHHHHHHHHh
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI--RP-KLTLPVFLRIMALGFL   91 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~   91 (387)
                      +..+|+++.+.+.++||..+...|..  +..++.++...|.+.+..+++.+....++.+  +. ..+++.+....+.+.+
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            34589999999999999999999999  6899999999999999999988766654322  11 2245666766777777


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccC
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTS  171 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~  171 (387)
                      . ..++..|.+|.++...-+++.=++..|++..+++++|+|||+++.      |++++.++.+||.......|       
T Consensus        82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g-------  147 (293)
T COG2962          82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG-------  147 (293)
T ss_pred             H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence            6 999999999999999999999999999999999999999999999      59999999999999875433       


Q ss_pred             CCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 016580          172 GGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKI  251 (387)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  251 (387)
                                     +-.+..+    .=+++|++|-.. ||..+- + +.+-.+.-...-.+..+.+.+..+...+....
T Consensus       148 ---------------~lpwval----~la~sf~~Ygl~-RK~~~v-~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~  205 (293)
T COG2962         148 ---------------SLPWVAL----ALALSFGLYGLL-RKKLKV-D-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQ  205 (293)
T ss_pred             ---------------CCcHHHH----HHHHHHHHHHHH-HHhcCC-c-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhc
Confidence                           2233333    335889999876 443333 3 45555555555566665555555543321222


Q ss_pred             cchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          252 GFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       252 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      .+...+..++..|.+ +++...++..+-|+.+-+..+.++|.+|..-.+++.+++||+++..+++..++|.+|++++.++
T Consensus       206 ~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         206 NANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             CCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344578888888886 9999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             cCC
Q 016580          332 KSK  334 (387)
Q Consensus       332 ~~~  334 (387)
                      ..+
T Consensus       285 ~l~  287 (293)
T COG2962         285 GLY  287 (293)
T ss_pred             HHH
Confidence            543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.88  E-value=7e-21  Score=176.70  Aligned_cols=274  Identities=17%  Similarity=0.174  Sum_probs=206.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHH
Q 016580           19 PYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQN   98 (387)
Q Consensus        19 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   98 (387)
                      ++++.++++++||+..+..|.. . ++++.++.  |..++.+++..+....+.. . ...++.+...++.|++- ..++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~-~-~~~~~~~~~g~l~G~~w-~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLP-E-FWALSIFLVGLLSGAFW-ALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCC-c-ccccHHHHHHHHHHHHH-Hhhhh
Confidence            5788999999999999999998 3 78887775  7777777776665443221 1 11245455555555554 89999


Q ss_pred             HHHHhhhccCchhHHHhhc-hhHHHHHHHHHHHhccccceeeccccch----hhHHHHHhhhhhhhhhccCccccccCCC
Q 016580           99 LYYLGMKYTTATFASATVN-ILPAVTFILAIIFRLETVNVRRLQSLAK----VIGTAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        99 ~~~~al~~~~~~~~~~l~~-~~pi~~~~la~~~l~e~~~~~~~~~~~~----~~g~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      +++.+.++++.+.+..+.+ +.+++..+++.+++||+.+.+      +    ++|++++++|++++...++++       
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~-------  141 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKS-------  141 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccc-------
Confidence            9999999999999998877 888999999999999999987      7    889999999999886432211       


Q ss_pred             CCCCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH---HHHHHHHHHHHHHhccCcccc
Q 016580          174 AGSHHGSSVDSSD-SHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLIC---LMGVVEGAAVSLIMERDMSAW  249 (387)
Q Consensus       174 ~~~~~~~~~~~~~-~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~  249 (387)
                              ....+ .+..+|+++.+.++++|+.|.+..|..  +++ |....+.+.   +.+.++..+..  . .. .++
T Consensus       142 --------~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~  206 (290)
T TIGR00776       142 --------AGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPL  206 (290)
T ss_pred             --------cccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-cc-cch
Confidence                    00000 234679999999999999999999975  244 666643333   33333333222  1 11 112


Q ss_pred             cccchhhHHHHHHhhhhhhhHHHHHHHHHHh-cCCceeEeecchhHHHHHHHHHHHHhhcccchhhh----hhHHHHHhh
Q 016580          250 KIGFDSRLLAAAYSGVVCSGIAYYVQGFVSK-QKGPVFVTSFSPLCMIITSALGVIILAELVHLGSI----LGAILIVFG  324 (387)
Q Consensus       250 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~----~G~~li~~g  324 (387)
                        .+...|. .+..|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.++.++    +|+++++.|
T Consensus       207 --~~~~~~~-~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~  282 (290)
T TIGR00776       207 --KKYAILL-NILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIA  282 (290)
T ss_pred             --HHHHHHH-HHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHH
Confidence              1223343 4448887 7999999999999 99999999999999999999999999999999999    999999999


Q ss_pred             hhheeec
Q 016580          325 LYTVVWG  331 (387)
Q Consensus       325 ~~l~~~~  331 (387)
                      +++....
T Consensus       283 ~~l~~~~  289 (290)
T TIGR00776       283 ANILGIG  289 (290)
T ss_pred             HHHHhcc
Confidence            9886543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=9.9e-24  Score=182.65  Aligned_cols=294  Identities=16%  Similarity=0.105  Sum_probs=221.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPV   94 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (387)
                      +..+|.++..++-++-.++.+..|..   +.+|.+..-.|+++-+++-.|...+.+...+.+  .....+++++|+.+ .
T Consensus        35 ~p~~gl~l~~vs~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhHHHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhh-h
Confidence            45567888888855444444444444   689999999998888887777665533322222  23335577888888 7


Q ss_pred             HHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCC
Q 016580           95 LDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGA  174 (387)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~  174 (387)
                      .+..+.|||++|.+.+++.++.+.+|++|.+++|+++||+.+..+      .++..+.+.||+++....   ..+++.. 
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvRPp---FlFG~~t-  178 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVRPP---FLFGDTT-  178 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEecCC---cccCCCc-
Confidence            888899999999999999999999999999999999999999996      999999999999997432   1111111 


Q ss_pred             CCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccch
Q 016580          175 GSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFD  254 (387)
Q Consensus       175 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  254 (387)
                          ++.+.+....+..|.+.++.++++-|-..++.|+..|+.+. .....|....+.+..++.....+.  ..++. ..
T Consensus       179 ----~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig~--~~lP~-cg  250 (346)
T KOG4510|consen  179 ----EGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIGA--VQLPH-CG  250 (346)
T ss_pred             ----cccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhccc--eecCc-cc
Confidence                11111223455677888888888888888888998887663 334445555666655554443332  22332 33


Q ss_pred             hhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          255 SRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       255 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      .+|+..+.+|++ +++++++.+.++++..+..+++..+++.++++++++++|++.||+..|+|+++++.+.+.....|.
T Consensus       251 kdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  251 KDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             cceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            578888889996 999999999999999999999999999999999999999999999999999999999887765543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=4.6e-19  Score=165.98  Aligned_cols=278  Identities=18%  Similarity=0.142  Sum_probs=216.8

Q ss_pred             HHHHHHhh-CCCC--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCchh
Q 016580           35 IITMVSLK-HGMS--HYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATF  111 (387)
Q Consensus        35 ~~~k~~~~-~~~~--p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~  111 (387)
                      .+.+.... +...  |..+++..+....++..+.....+++   +.++..++.....+++. .++..+-+.|++|.|.+.
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence            44444432 2334  88999999999888877766543312   22334455667777777 889999999999999999


Q ss_pred             HHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCchhh
Q 016580          112 ASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFT  191 (387)
Q Consensus       112 ~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (387)
                      ..++.++.|+++++++.+++|+|++..      |+.++++..+|+++....+...            ++...........
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~------------~~~~~~~~~~~~~  154 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSS------------SSSSNSSSFSSAL  154 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccc------------ccccccccccchh
Confidence            999999999999999999999999999      5999999999999997654322            1111122222334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHH--hccCccccc--ccchhhHHHHHHhhhh
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLI--MERDMSAWK--IGFDSRLLAAAYSGVV  266 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~g~~  266 (387)
                      |+++.+++.++.|...+++++..++++ ++...+++...++.+...+....  .+.....++  ...+..+..++...+ 
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-
Confidence            999999999999999999999998776 47899999999999988887766  222111111  112224444455555 


Q ss_pred             hhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCC
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD  335 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~  335 (387)
                      ++.++..+.+...++.++...+++..++.+++++++++++++++++.+|+|.++++.|..++.+.++|+
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            478888888899999999999999999999999999999999999999999999999999999887765

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.85  E-value=8.1e-20  Score=165.94  Aligned_cols=301  Identities=14%  Similarity=0.151  Sum_probs=228.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHHHHHHHHH----HHh---hhcCCC---------
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGM--SHYVLAVYRHVVATIVLAPFA----FVL---ERKIRP---------   75 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~l~l~~~~----~~~---~~~~~~---------   75 (387)
                      +|...|+.++++..++|-.+.-+.+..+.++-  .|+..++.....-.+-+.++.    .++   +|.++.         
T Consensus        10 ~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d   89 (416)
T KOG2765|consen   10 WRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEAD   89 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhh
Confidence            45668999999999999999999999984432  488877665443333333322    111   110000         


Q ss_pred             --------------------------------------------------CC-CH------------HHHHHHHHHHHhH
Q 016580           76 --------------------------------------------------KL-TL------------PVFLRIMALGFLE   92 (387)
Q Consensus        76 --------------------------------------------------~~-~~------------~~~~~~~~~g~~~   92 (387)
                                                                        +. .+            +..+..+....+-
T Consensus        90 ~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW  169 (416)
T KOG2765|consen   90 AEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW  169 (416)
T ss_pred             hhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence                                                              00 01            2233344444554


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCC
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG  172 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~  172 (387)
                       .++++.++.|+.+++++..+++.+++.+||.+++.++..||++..      |++++.+++.|++++...+...      
T Consensus       170 -F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~------  236 (416)
T KOG2765|consen  170 -FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ------  236 (416)
T ss_pred             -HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc------
Confidence             889999999999999999999999999999999999999999999      8999999999999997543211      


Q ss_pred             CCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchH---HHHHHHHHHHHHHHHHHHHhcc-Cccc
Q 016580          173 GAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELS---LSTLICLMGVVEGAAVSLIMER-DMSA  248 (387)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~-~~~~  248 (387)
                              .++.......+|+++++++++.||+|.++.||...+.+..+.   ...+..++..++++|..++.+. ..+.
T Consensus       237 --------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~  308 (416)
T KOG2765|consen  237 --------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER  308 (416)
T ss_pred             --------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc
Confidence                    122344566899999999999999999999998877632222   3334445556666665554433 2334


Q ss_pred             ccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          249 WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       249 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                      ++.+...+...++..+++.++++-++|.+|.-.++|..+++-+.++++.+++.+.++-+.++++.+++|...|++|.+++
T Consensus       309 F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~v  388 (416)
T KOG2765|consen  309 FELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIV  388 (416)
T ss_pred             ccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhe
Confidence            55555556777888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCC
Q 016580          329 VWGKSKD  335 (387)
Q Consensus       329 ~~~~~~~  335 (387)
                      ++.....
T Consensus       389 n~~~~~~  395 (416)
T KOG2765|consen  389 NISSENS  395 (416)
T ss_pred             ecccccc
Confidence            8766543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.77  E-value=1.9e-18  Score=158.79  Aligned_cols=292  Identities=13%  Similarity=0.091  Sum_probs=229.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhh--CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLK--HGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP   93 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (387)
                      .....++....-++-.......|+.++  +.--|..++.++...+.+.++.....+..+..+..++..+...+.+|++. 
T Consensus        15 ~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-   93 (316)
T KOG1441|consen   15 ILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-   93 (316)
T ss_pred             hHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-
Confidence            334445555555666666677888875  33458899999777777777766555433333333456777888888888 


Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCC
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      .++..+-+.|+.+.+++.++.+..++|+++.++++++.+|+.+...      +..++....|+.+.+..           
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~-----------  156 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASVT-----------  156 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeeec-----------
Confidence            9999999999999999999999999999999999999999999995      89999999999998742           


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhc--cCC-CchHHHHHHHHHHHHHHH-HHHHHhccCcc--
Q 016580          174 AGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLK--KYP-AELSLSTLICLMGVVEGA-AVSLIMERDMS--  247 (387)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~--  247 (387)
                                 ..+.+..|...++++.+..++.+++.++..+  +.. ++..+..++..++.+.++ |+....+.+..  
T Consensus       157 -----------e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~  225 (316)
T KOG1441|consen  157 -----------ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVG  225 (316)
T ss_pred             -----------cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceee
Confidence                       3356789999999999999999999999995  322 579999999999999999 87765554332  


Q ss_pred             -cccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhh
Q 016580          248 -AWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLY  326 (387)
Q Consensus       248 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~  326 (387)
                       .. ..+.......++..+ +...-+...+..+.+++|.+.++...+.-++.++.++++|+++.|+.+.+|.++.++|++
T Consensus       226 ~~~-~~~~~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~  303 (316)
T KOG1441|consen  226 FLT-APWFVTFLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF  303 (316)
T ss_pred             eec-cccchhhHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence             11 011112333333343 356666777888999999999999999999999999999999999999999999999999


Q ss_pred             heeeccCCCCCC
Q 016580          327 TVVWGKSKDPPS  338 (387)
Q Consensus       327 l~~~~~~~~~~~  338 (387)
                      +|.+.|.++++.
T Consensus       304 ~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  304 LYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHhhhhhcc
Confidence            999888765543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.68  E-value=1.1e-16  Score=138.26  Aligned_cols=282  Identities=14%  Similarity=0.138  Sum_probs=211.3

Q ss_pred             hhhHHHHHHHHHHH-HHHHHHHHHHHhhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHH
Q 016580           16 KFKPYLAIISLQFG-YAGMYIITMVSLKHGM-SHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP   93 (387)
Q Consensus        16 ~~~~~l~~l~~~~~-~~~~~~~~k~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (387)
                      -+++..+.=+-+++ -+..+..+..+ .+++ .|...+|..+..-+++-.+++.+++     +.-...|...++.+++. 
T Consensus        16 ~li~~~LGQiLSL~~t~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-----~~~~~~~~hYilla~~D-   88 (336)
T KOG2766|consen   16 TLIGLGLGQILSLLITSTAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPIMLFRR-----KYIKAKWRHYILLAFVD-   88 (336)
T ss_pred             hhheeeHHHHHHHHHHcchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhHHHhhh-----HHHHHHHHHhhheeEEe-
Confidence            34444443333333 33344444444 4544 4888999999999999999987743     12234555677788887 


Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCC
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      +-+|.+...|.+|++...+..+-.-..+.+.+++|+++|.|.++.      |+.|+++|+.|+.++...           
T Consensus        89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s-----------  151 (336)
T KOG2766|consen   89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS-----------  151 (336)
T ss_pred             ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe-----------
Confidence            888889999999999999999999999999999999999999999      699999999999999754           


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhcc-Cccccccc
Q 016580          174 AGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMSAWKIG  252 (387)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~  252 (387)
                       |.++  .++.+..+...|+++.++++-+||+.++....+.|+.+ ....+....++|+++..+-. +.+. +.....+.
T Consensus       152 -DV~a--gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~-i~~~~~~~tl~w~  226 (336)
T KOG2766|consen  152 -DVHA--GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQF-IFERHHVSTLHWD  226 (336)
T ss_pred             -eecc--ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHH-hhhccceeeEeeh
Confidence             2332  23445567789999999999999999999999999876 68889999999999988874 4443 22222221


Q ss_pred             chhhHHHHHHh-hhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          253 FDSRLLAAAYS-GVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       253 ~~~~~~~~~~~-g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                          |....++ ..++.++-|.+.-..+|..+++...+-..+.-.+++++  -.||=+.+|...+..+.+..|.+++..+
T Consensus       227 ----~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  227 ----SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             ----HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence                2222222 22335555666666788889998888888899999888  6678889999999999999999998543


Q ss_pred             c
Q 016580          332 K  332 (387)
Q Consensus       332 ~  332 (387)
                      +
T Consensus       301 e  301 (336)
T KOG2766|consen  301 E  301 (336)
T ss_pred             c
Confidence            3

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.67  E-value=1.4e-13  Score=125.86  Aligned_cols=299  Identities=14%  Similarity=0.149  Sum_probs=210.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCC---CChHHHHHHHHHHHHHHHHHHHHHhhhc----CCCC------CCHHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHG---MSHYVLAVYRHVVATIVLAPFAFVLERK----IRPK------LTLPVFLR   84 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~------~~~~~~~~   84 (387)
                      .-++.+++.++.++......|+.-..+   +.|...+++--++-.++....++...|+    ..+.      ..+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            667778888899999999999984334   6688888877777766666665554322    1111      23455666


Q ss_pred             HHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccC
Q 016580           85 IMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKG  164 (387)
Q Consensus        85 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~  164 (387)
                      ..+-+++. .++|.++|.++.+.+++..++..++..+.|+++.++++++|++++      ||.++++.++|+.++.....
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            67777776 898899999999999999999999999999999999999999999      59999999999999963222


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH-hc
Q 016580          165 PIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLI-ME  243 (387)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~  243 (387)
                      +..           ...+.........|....+.+++.-++..++.++.+|+-+.+..+.-.++-.-++++.....+ .+
T Consensus       168 ~~~-----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d  236 (345)
T KOG2234|consen  168 SPT-----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQD  236 (345)
T ss_pred             CCC-----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            110           000123456678999999999999999999999999885555555555554444444444433 22


Q ss_pred             cCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHh
Q 016580          244 RDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVF  323 (387)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~  323 (387)
                      .+...|..-. .+|-...+.-++..+++=++....+|+.+-..=.....+..+++.+.++.+++-+||....+|..+++.
T Consensus       237 ~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~  315 (345)
T KOG2234|consen  237 GEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVIL  315 (345)
T ss_pred             ccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHH
Confidence            2222111100 122222222222333344444555677666655666668889999999999999999999999999999


Q ss_pred             hhhheeeccCCC
Q 016580          324 GLYTVVWGKSKD  335 (387)
Q Consensus       324 g~~l~~~~~~~~  335 (387)
                      ++.++...+.++
T Consensus       316 Si~lY~~~P~~~  327 (345)
T KOG2234|consen  316 SIFLYSLYPARD  327 (345)
T ss_pred             HHHHhhcCCccc
Confidence            999998555443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.63  E-value=2.1e-14  Score=122.74  Aligned_cols=224  Identities=15%  Similarity=0.095  Sum_probs=181.3

Q ss_pred             HHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCcccc
Q 016580           89 GFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIIN  168 (387)
Q Consensus        89 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~  168 (387)
                      ....+.+....-+.|+++.|-....+-.++-|+-++++++++.|.+.+++      |...+++.++|+++..+..+..  
T Consensus        91 cs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv--  162 (337)
T KOG1580|consen   91 CSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKV--  162 (337)
T ss_pred             HHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHhhcccccc--
Confidence            34444777788889999999998888899999999999999999999999      6999999999999986544322  


Q ss_pred             ccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhcc--C
Q 016580          169 FTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMER--D  245 (387)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~--~  245 (387)
                                   .+..+.....|-++.+++-..-++-...+.+..+.+. ..-.++++.++.++..+..-.++.+.  +
T Consensus       163 -------------~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElwe  229 (337)
T KOG1580|consen  163 -------------GGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWE  229 (337)
T ss_pred             -------------CCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHH
Confidence                         2344566778999999999999999988888776554 34677888888888777665544332  1


Q ss_pred             cccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhh
Q 016580          246 MSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGL  325 (387)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~  325 (387)
                      ...+....+..|+-+...++ ++.+++.+.+.-+.+.+|..-+++..+.-.++++.++++++.+++.+||+|.++++.++
T Consensus       230 F~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL  308 (337)
T KOG1580|consen  230 FFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSAL  308 (337)
T ss_pred             HHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHh
Confidence            11222223456777777887 49999999999999999999999999999999999999999999999999999999998


Q ss_pred             hheeeccCC
Q 016580          326 YTVVWGKSK  334 (387)
Q Consensus       326 ~l~~~~~~~  334 (387)
                      ..-....++
T Consensus       309 ~~D~~~GK~  317 (337)
T KOG1580|consen  309 TADVVDGKK  317 (337)
T ss_pred             hhHhhcCCc
Confidence            876655444

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.63  E-value=3.1e-15  Score=115.94  Aligned_cols=135  Identities=18%  Similarity=0.195  Sum_probs=120.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCHHHHHHHHHHHHhHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIR-PKLTLPVFLRIMALGFLEPVLD   96 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~   96 (387)
                      ...+++++++++|+...++.|..+ ++.+|...++.|..+..++++.++...++... ...+.|.|..+.+.|+.+ +++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            357899999999999999999996 89999999999999999999888876554432 234678888888888766 999


Q ss_pred             HHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           97 QNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      +.+||+|++...++.+.++..++|+++.+++++++|||++..      +|+|+.+..+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999      5999999999999875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.60  E-value=6.1e-14  Score=126.27  Aligned_cols=229  Identities=17%  Similarity=0.199  Sum_probs=164.7

Q ss_pred             CHHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhh
Q 016580           78 TLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAM  157 (387)
Q Consensus        78 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~  157 (387)
                      ++++..++.+.+++. .+++.+.++++++++++..+++.++..++|++++++++|+|++.+      ||+++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence            457777788888886 999999999999999999999999999999999999999999999      5999999999999


Q ss_pred             hhhhccCccccccCCCCCCCCCCC--CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH-HHHHHHH
Q 016580          158 VMTLYKGPIINFTSGGAGSHHGSS--VDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLI-CLMGVVE  234 (387)
Q Consensus       158 l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~v~  234 (387)
                      ++...+....       +.+++..  ..........|.++.++++++.++..++.++..|+.+.+......+ ...+.+.
T Consensus        86 lv~~~~~~~~-------~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~  158 (244)
T PF04142_consen   86 LVQLSSSQSS-------DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILF  158 (244)
T ss_pred             eeecCCcccc-------ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence            9865432210       0000000  0112445679999999999999999999999999865444444444 3444444


Q ss_pred             HHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhh
Q 016580          235 GAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGS  314 (387)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~  314 (387)
                      .++...+.+.... .+...-..|-...+..++..+++=++....+|+.+...=........+++.+.++++++.+++...
T Consensus       159 ~~~~~~~~~~~~~-~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f  237 (244)
T PF04142_consen  159 NLLALLLSDGSAI-SESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF  237 (244)
T ss_pred             HHHHHhccccccc-ccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence            4443323222110 000000122222233333455556666777899999888888999999999999999999999999


Q ss_pred             hhhHHHH
Q 016580          315 ILGAILI  321 (387)
Q Consensus       315 ~~G~~li  321 (387)
                      .+|..++
T Consensus       238 ~lg~~~V  244 (244)
T PF04142_consen  238 LLGAALV  244 (244)
T ss_pred             hhheecC
Confidence            9998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.59  E-value=8.3e-13  Score=117.49  Aligned_cols=253  Identities=15%  Similarity=0.159  Sum_probs=190.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcC---CCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHH
Q 016580           47 HYVLAVYRHVVATIVLAPFAFVLERKI---RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVT  123 (387)
Q Consensus        47 p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~  123 (387)
                      |..++.+..++-.++....-...+++.   +...+|++..+-+....+..++...+-+.+++|++.+..++..+..++|+
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            888888888777776655544433322   23567777665554444444899999999999999999999999999999


Q ss_pred             HHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHH
Q 016580          124 FILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGW  203 (387)
Q Consensus       124 ~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  203 (387)
                      .+++.+|.-|++++.      -..-+.+..+|+.+.+..+                      .+.+..|.++.++++++-
T Consensus       125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~Ks----------------------Tqf~i~Gf~lv~~aS~~s  176 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTYKS----------------------TQFNIEGFFLVLAASLLS  176 (349)
T ss_pred             HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEecc----------------------cceeehhHHHHHHHHHhh
Confidence            999999999999997      2555556666777776432                      245678999999999999


Q ss_pred             HHHHHHHHHHhccCC----CchHHHHHHHHHHHHHHHHHHHHhccCcc-----cccccch-hhHHHHHHhhhhhhhHHHH
Q 016580          204 AGFFILQSFTLKKYP----AELSLSTLICLMGVVEGAAVSLIMERDMS-----AWKIGFD-SRLLAAAYSGVVCSGIAYY  273 (387)
Q Consensus       204 a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~g~~~~~~~~~  273 (387)
                      ++-..+.+..+++.+    +|....+.......+.++|..+.+|+...     .++.... ..+..+...++ ++.+++.
T Consensus       177 GlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~  255 (349)
T KOG1443|consen  177 GLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFL  255 (349)
T ss_pred             hhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHH
Confidence            988888888888755    57888888888888888888888776321     2222111 23333333333 2444443


Q ss_pred             ---HHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          274 ---VQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       274 ---~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                         +-+.-+.+++..+.++.....-+.+.+++..+.+|.++...|+|..+...|+.++
T Consensus       256 l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  256 LEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence               3355578889999999999999999999999999999999999999999999988

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.58  E-value=7.4e-14  Score=124.21  Aligned_cols=266  Identities=13%  Similarity=0.158  Sum_probs=210.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHH
Q 016580           46 SHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFI  125 (387)
Q Consensus        46 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~  125 (387)
                      ++..+.+.+.+.+.++-..++.++..+..   .++.++.....++.+ .+...|-+.|++|.+-....+-.++-.+-+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~~---~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKELS---GVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccccCC---CCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            57788888888888887666544333322   235566677777777 88999999999999999999999999999999


Q ss_pred             HHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 016580          126 LAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAG  205 (387)
Q Consensus       126 la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  205 (387)
                      ...++.|.|++..      +.....+...|+.+..+.+..+             +....+......|..+....-++-++
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-------------s~~~~g~~ns~~G~~Ll~~~L~fDgf  186 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-------------SSSKSGRENSPIGILLLFGYLLFDGF  186 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-------------CccccCCCCchHhHHHHHHHHHHHhh
Confidence            9999999999999      4888888999998887664322             22234556778999999999999999


Q ss_pred             HHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccCccc--ccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcC
Q 016580          206 FFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERDMSA--WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQK  282 (387)
Q Consensus       206 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~  282 (387)
                      -+..++++.+++. ++..++++.+++..+......+..+.....  +-...+..++-++.... ++++++.+.++-+++.
T Consensus       187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~F  265 (327)
T KOG1581|consen  187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERF  265 (327)
T ss_pred             HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhc
Confidence            9999999998755 478889999999888877763222221111  11112235556666666 4899999999999999


Q ss_pred             CceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCC
Q 016580          283 GPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD  335 (387)
Q Consensus       283 ~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~  335 (387)
                      ++.+.+.++.++-+++++++.+.+|.++++.||+|..+++.|+.+-.+-++++
T Consensus       266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999887766663

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.58  E-value=1.2e-12  Score=118.07  Aligned_cols=292  Identities=13%  Similarity=0.091  Sum_probs=222.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHH--HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHh
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAV--YRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFL   91 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   91 (387)
                      .+...+++.++.-++.-..+.+..|+++...--|..+..  ++.+.+.+.+...-.. +--..++++++..++.+...++
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~l   86 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLL   86 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHH
Confidence            444556777777777778888999999854333444444  7777776666554322 2223456778888888888888


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccC
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTS  171 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~  171 (387)
                      . .+....-..+++|.+....+++...+|+++++.+..++|.+++...      +.++....+|.......         
T Consensus        87 f-~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~---------  150 (314)
T KOG1444|consen   87 F-VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFT---------  150 (314)
T ss_pred             H-HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhccc---------
Confidence            7 8888888999999999999999999999999999999998888884      88887777777766422         


Q ss_pred             CCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccCc----
Q 016580          172 GGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERDM----  246 (387)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~----  246 (387)
                                   +...+..|..+++...+.-+.+.+..|+..+..+ +.+.+.+|..+.....+....++.++..    
T Consensus       151 -------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~  217 (314)
T KOG1444|consen  151 -------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL  217 (314)
T ss_pred             -------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence                         2234456999999999999999999999877533 3577889999999988888876655311    


Q ss_pred             --ccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhh
Q 016580          247 --SAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFG  324 (387)
Q Consensus       247 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g  324 (387)
                        ..|.  ....+..+...+++ ++.-.++-..+.+..++++.+++.......+.+...++++++.++..++|..+-++|
T Consensus       218 ~~~~~~--~~~~~~~~~lScv~-gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g  294 (314)
T KOG1444|consen  218 NFDNWS--DSSVLVVMLLSCVM-GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG  294 (314)
T ss_pred             hccccc--chhHHHHHHHHHHH-HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence              1121  12345566666665 566666778899999999999999888888888887878889999999999999999


Q ss_pred             hhheeeccCCCCCC
Q 016580          325 LYTVVWGKSKDPPS  338 (387)
Q Consensus       325 ~~l~~~~~~~~~~~  338 (387)
                      -+++++.+.++++.
T Consensus       295 gv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  295 GVLYSYATFRKKKQ  308 (314)
T ss_pred             hhHHhhhhhhhccC
Confidence            99999887554433

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.58  E-value=6.9e-14  Score=108.48  Aligned_cols=136  Identities=16%  Similarity=0.104  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHH
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIA  271 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  271 (387)
                      ..++++++++++++..++.|--.++.+ |...++.+.+...+++..+....++... .....++.|..++..|+ +++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~-~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQA-GGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceec-ccccCcceehhhhHHHH-HHHHH
Confidence            468899999999999999998888866 6788889999888888887765544221 11124468888888886 69999


Q ss_pred             HHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          272 YYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       272 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      .++|+++++..+++.+.++..+.|+++.++++++++|++|..+++|+++|++|.+++.+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999998764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.55  E-value=1.6e-13  Score=120.41  Aligned_cols=280  Identities=15%  Similarity=0.146  Sum_probs=202.0

Q ss_pred             HHHHHHHHHHHHhhC----C----CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-------------CHHHHHHHHH
Q 016580           29 GYAGMYIITMVSLKH----G----MSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL-------------TLPVFLRIMA   87 (387)
Q Consensus        29 ~~~~~~~~~k~~~~~----~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~   87 (387)
                      .=..+.+..|++ +.    +    -+|+......++.-.+++..+..++.|...+..             +.+ -...+.
T Consensus        14 sGs~Ntl~aKwa-dsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~   91 (372)
T KOG3912|consen   14 SGSFNTLVAKWA-DSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLP   91 (372)
T ss_pred             hccHHHHHHHHH-HhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecC
Confidence            334567778887 31    1    348888888888888999998888766433211             111 112233


Q ss_pred             HHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccc
Q 016580           88 LGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPII  167 (387)
Q Consensus        88 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~  167 (387)
                      -.++- ..+..+.|.++.+++++..+++.....+|+.+++.-+++.+++.+      ||+|+....+|++++...     
T Consensus        92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-----  159 (372)
T KOG3912|consen   92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-----  159 (372)
T ss_pred             hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-----
Confidence            45555 888899999999999999999999999999999999999999999      599999999999988643     


Q ss_pred             cccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccC-
Q 016580          168 NFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERD-  245 (387)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-  245 (387)
                             |.+-...+..+-+....|+++.+++-+.-|+..++-+|..++++ +|.....|..++|.+++.........- 
T Consensus       160 -------d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~  232 (372)
T KOG3912|consen  160 -------DVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIP  232 (372)
T ss_pred             -------ecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhhee
Confidence                   22211222233456678999999999999999999999998766 689999999999977765555433210 


Q ss_pred             -cccccccch---hhHH---------HHHHhhhhhhhHHHHHHHH----HHhcCCceeEeecchhHHHHHHHHHHHHhhc
Q 016580          246 -MSAWKIGFD---SRLL---------AAAYSGVVCSGIAYYVQGF----VSKQKGPVFVTSFSPLCMIITSALGVIILAE  308 (387)
Q Consensus       246 -~~~~~~~~~---~~~~---------~~~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e  308 (387)
                       ...++-.+.   .+|.         ..+++.+.+..++..+++.    .-|+.++++-..+..+...+-.+++.....|
T Consensus       233 ~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E  312 (372)
T KOG3912|consen  233 SGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE  312 (372)
T ss_pred             cCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH
Confidence             001111010   1111         1122222223333333332    2567888888899999999999999999999


Q ss_pred             ccchhhhhhHHHHHhhhhhee
Q 016580          309 LVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       309 ~~t~~~~~G~~li~~g~~l~~  329 (387)
                      .+...|+.|.++.+.|++++.
T Consensus       313 ~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  313 YFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.49  E-value=1.2e-13  Score=111.64  Aligned_cols=125  Identities=26%  Similarity=0.427  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhcc
Q 016580           28 FGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYT  107 (387)
Q Consensus        28 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  107 (387)
                      ++||...++.|... ++.+|....++|+.++.+ ++++.....++.....+++++......+.+....++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            47999999999995 779999999999999998 6666655555444566778888888899886699999999999999


Q ss_pred             CchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580          108 TATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus       108 ~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      +++.++++.++.|+++.+++++++||+++.+      +++|+++++.|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999      5999999999998874

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.41  E-value=5.6e-13  Score=107.69  Aligned_cols=125  Identities=24%  Similarity=0.344  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHh
Q 016580          201 FGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSK  280 (387)
Q Consensus       201 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~  280 (387)
                      ++||.+.+..|+..++.+ +....++++..+.+ .++...+.+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            468999999999999876 79999999999998 666665554432  22224457778888888878999999999999


Q ss_pred             cCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          281 QKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       281 ~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                      +.++..++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.36  E-value=1.2e-11  Score=108.68  Aligned_cols=268  Identities=13%  Similarity=0.058  Sum_probs=181.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhc-cCchhHHHhhchhHHHHHHH
Q 016580           48 YVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKY-TTATFASATVNILPAVTFIL  126 (387)
Q Consensus        48 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~~l  126 (387)
                      -.++|..+++-+.--+++.--. ...+++.+.+++...+..    +...+.+-++++++ .+...=.++.+-.++.++++
T Consensus        34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            4566666666665555543111 112355566655544332    24455666688887 55566677899999999999


Q ss_pred             HHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 016580          127 AIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGF  206 (387)
Q Consensus       127 a~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~  206 (387)
                      +++++|.|.+.+      |..++.+..+|+++.++.+..+.+-  .. +.-+++.+......+..|+.+...+.+..|..
T Consensus       109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~-~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KL-SGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hh-cccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999      5999999999999998876544210  00 00011112233344568999999999999999


Q ss_pred             HHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHh--------ccCc---ccccccchhhHHHHHHhhhhhhhHHHHH
Q 016580          207 FILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIM--------ERDM---SAWKIGFDSRLLAAAYSGVVCSGIAYYV  274 (387)
Q Consensus       207 ~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~  274 (387)
                      .++++...++++ ++-+..+|..+.....++...--.        ..+.   +.....-+..|..++     +..+.++.
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl-----~n~L~Qy~  254 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL-----FNVLTQYF  254 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH-----HHHHHHHH
Confidence            999999998877 578888888887766655433100        0000   000001122344433     34445555


Q ss_pred             HHHH----HhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          275 QGFV----SKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       275 ~~~a----~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      ...+    -.++++.+++++..++-.++.+++.+.|+.++++..|+|..++++|.+++.....+
T Consensus       255 CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  255 CIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH  318 (330)
T ss_pred             HHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            5444    45578889999999999999999999999999999999999999999888754443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.27  E-value=3.7e-11  Score=100.38  Aligned_cols=212  Identities=16%  Similarity=0.139  Sum_probs=160.6

Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCC
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      ...++.|..|++..+++.++.+..+...|+.+++++.+|+++...      |+++.++++.|++++.+.++         
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN---------  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN---------  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence            678899999999999999999999999999999999999999998      69999999999999976553         


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH-----HHHHHHHHHHhccCccc
Q 016580          174 AGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMG-----VVEGAAVSLIMERDMSA  248 (387)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~  248 (387)
                                 .....+.|+.+++.+++..|+|-+..|+....-+ --....++...+     .+..-++.+.. .....
T Consensus       129 -----------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T~VE~  195 (290)
T KOG4314|consen  129 -----------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAF-TGVEH  195 (290)
T ss_pred             -----------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHH-hchHH
Confidence                       2356789999999999999999999999887533 111111111111     11112222211 12333


Q ss_pred             ccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          249 WKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       249 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                      |+.-....|..+...+.+ +..-.++.+.++....|...++-+....+....++.++-+-..+.....|.++|+.|.+++
T Consensus       196 ~qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  196 LQSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             HHHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            432233467777766665 4555677788999999999999999999999999987666668889999999999999888


Q ss_pred             eeccCC
Q 016580          329 VWGKSK  334 (387)
Q Consensus       329 ~~~~~~  334 (387)
                      .....+
T Consensus       275 iiP~d~  280 (290)
T KOG4314|consen  275 IIPEDK  280 (290)
T ss_pred             ecccch
Confidence            765433

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.27  E-value=1.3e-09  Score=98.07  Aligned_cols=249  Identities=16%  Similarity=0.172  Sum_probs=172.8

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC--HHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHh-hchhHH
Q 016580           45 MSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLT--LPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASAT-VNILPA  121 (387)
Q Consensus        45 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi  121 (387)
                      -+|..-++.-...+.++-+..... .+   +..+  .+.+...++.|++- .+++...+.++++...+.+.++ ..++-+
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~-~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv   84 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLF-RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV   84 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHH-hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence            345555555555555554444433 22   2333  37777778888887 9999999999999999999988 466677


Q ss_pred             HHHHHHHHHhccccceeeccccchhh---HHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016580          122 VTFILAIIFRLETVNVRRLQSLAKVI---GTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIG  198 (387)
Q Consensus       122 ~~~~la~~~l~e~~~~~~~~~~~~~~---g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~  198 (387)
                      .+.++++++++|.-+..+     +.+   ++++.++|+++....++++              .......+...|....++
T Consensus        85 g~sl~gv~~fgEW~~~~~-----~~~G~~Al~liiiGv~lts~~~~~~--------------~~~~~~~~~~kgi~~Ll~  145 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTTQ-----KIIGFLALVLIIIGVILTSYQDKKS--------------DKSSSKSNMKKGILALLI  145 (269)
T ss_pred             HHHHHHHhhcCCCCCcch-----HHHHHHHHHHHHHHHHHhccccccc--------------cccccccchhhHHHHHHH
Confidence            799999999999988775     333   5567788888876544321              011124456789999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHH
Q 016580          199 SCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFV  278 (387)
Q Consensus       199 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  278 (387)
                      +.+.|..|.+..|..  +.+ +....+-+.+.-.+....+....+.  ..+   ....| .-+..|++ -.++..++..+
T Consensus       146 stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~~--~~~---~k~~~-~nil~G~~-w~ignl~~~is  215 (269)
T PF06800_consen  146 STIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSKK--PFF---EKKSW-KNILTGLI-WGIGNLFYLIS  215 (269)
T ss_pred             HHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhcccc--ccc---ccchH-HhhHHHHH-HHHHHHHHHHh
Confidence            999999999997653  223 5665554443333333333322211  111   11233 33445664 78889999999


Q ss_pred             HhcCCceeEeecchhHHHHHHHHHHHHhhcccchhh----hhhHHHHHhhhhh
Q 016580          279 SKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGS----ILGAILIVFGLYT  327 (387)
Q Consensus       279 ~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~----~~G~~li~~g~~l  327 (387)
                      .++.+.+..=.+..+.++++.+.+.+++||+=+..+    ++|.++++.|.++
T Consensus       216 ~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  216 AQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999977664    5788888888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.23  E-value=4.1e-11  Score=101.96  Aligned_cols=282  Identities=15%  Similarity=0.141  Sum_probs=197.8

Q ss_pred             HHHHHHHHHhh-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCc
Q 016580           32 GMYIITMVSLK-HGMS-HYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTA  109 (387)
Q Consensus        32 ~~~~~~k~~~~-~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  109 (387)
                      .+.+..|+.++ .+++ .+.+++++..++..-+..+-..+    ....+.++.+..+..+++. .+..+.--.+++|.+.
T Consensus        20 lmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~----~~~fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~v   94 (309)
T COG5070          20 LMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLR----LVEFRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAV   94 (309)
T ss_pred             HHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHh----HhheehhhhhhhcCHHHHH-HHHHHhcccceeeeee
Confidence            44555676652 2333 45555666665555544442221    1122233333444445554 5555556689999999


Q ss_pred             hhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCCCCCch
Q 016580          110 TFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDSSDSHF  189 (387)
Q Consensus       110 ~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (387)
                      ...+++.+++.+.++..+..++|.+++..+      ....++.+..-+.-...+.            ++..   ......
T Consensus        95 piYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~------------q~~~---~~~~~l  153 (309)
T COG5070          95 PIYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQ------------QASA---FKAQIL  153 (309)
T ss_pred             eHHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchh------------hHHH---HHhccc
Confidence            999999999999999999999999999985      7777766665555433221            1101   112355


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccC-ccccccc-chhhHHHHHHhhhh
Q 016580          190 FTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERD-MSAWKIG-FDSRLLAAAYSGVV  266 (387)
Q Consensus       190 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~  266 (387)
                      ..|.+++..-++..+.|....|+..+-.+ .....++|..+.+..+++.+..+.++. +...... +.....++...|++
T Consensus       154 N~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~  233 (309)
T COG5070         154 NPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC  233 (309)
T ss_pred             CCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence            68999999999999999999888776322 358889999999999999998877652 2211111 12234566777775


Q ss_pred             hhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCCCCCCC
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSA  340 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~~~~~~  340 (387)
                       ++.-.++-.+.++.++.++.+++..++-.-..+.|.++++|+.+...+....+-.++..++...+.++++.++
T Consensus       234 -svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         234 -SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             -HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             5555567889999999999999999999999999999999999999999999999988888887766554443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.23  E-value=2.8e-10  Score=104.27  Aligned_cols=134  Identities=18%  Similarity=0.256  Sum_probs=113.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSH--YVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLE   92 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   92 (387)
                      ...+|.+++++++++|+...+..|... ++.++  .....+++.++.++++++.+..++.  ...+.+.+...+..+++.
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            345799999999999999999999994 56664  4555578999999888887654322  233567777788888888


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhh
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAM  157 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~  157 (387)
                      ...++.++++++++.+++.++.+.++.|+++.+++++++||+++..      +++|+.+.+.|++
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence            7899999999999999999999999999999999999999999999      5999999998863

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.21  E-value=3.5e-11  Score=105.55  Aligned_cols=278  Identities=13%  Similarity=0.069  Sum_probs=192.8

Q ss_pred             HHHHHHhhC---CC-ChHHHHHHHHHHHHHHHHHHHHHhhhcCC----C--CCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 016580           35 IITMVSLKH---GM-SHYVLAVYRHVVATIVLAPFAFVLERKIR----P--KLTLPVFLRIMALGFLEPVLDQNLYYLGM  104 (387)
Q Consensus        35 ~~~k~~~~~---~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al  104 (387)
                      ...|+.++.   .+ .|..++++..++...+-+.+.....+-.+    +  +++.+..+...-..++- .+...+-++.+
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            345666522   12 37777788777776666666554433211    1  23444444444444443 44555556889


Q ss_pred             hccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCC
Q 016580          105 KYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDS  184 (387)
Q Consensus       105 ~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (387)
                      +|.+++...+=.++..+|+.++.++++|+|-+...      ..+..+.+.|-.+=....                   ..
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE-------------------~~  178 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQE-------------------GS  178 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehheeccccc-------------------cc
Confidence            99999999999999999999999999999988873      444444444544322110                   12


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCC-chHHHHHHHHHHHHHHHHHHHHhccCccccc--cc-chhhHHHH
Q 016580          185 SDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPA-ELSLSTLICLMGVVEGAAVSLIMERDMSAWK--IG-FDSRLLAA  260 (387)
Q Consensus       185 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~-~~~~~~~~  260 (387)
                      .+.-.+.|.++.+.|.++-|+..+..|+......+ -..+++|..+.+.++++|...+.+.-...+.  .. ....|..+
T Consensus       179 ~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  179 TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILM  258 (347)
T ss_pred             cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHH
Confidence            34557899999999999999999999977655443 5788899999999999998866543211111  21 22355556


Q ss_pred             HHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCCCCCC
Q 016580          261 AYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSS  339 (387)
Q Consensus       261 ~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~~~~~  339 (387)
                      ...|++ ++.-.+.-.+=+|-++|.+-.+-....-..-.+++..+++|.-+..-|-|-.+++.|...+.+.|.++.+++
T Consensus       259 tLsglf-gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~  336 (347)
T KOG1442|consen  259 TLSGLF-GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHH-HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence            666665 332222334447889999999888889999999999999999999999999999999999998876554443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.20  E-value=4.5e-10  Score=98.49  Aligned_cols=277  Identities=16%  Similarity=0.131  Sum_probs=196.1

Q ss_pred             HHHHHHHHHHHHHhh-CCCCh--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 016580           28 FGYAGMYIITMVSLK-HGMSH--YVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLGM  104 (387)
Q Consensus        28 ~~~~~~~~~~k~~~~-~~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al  104 (387)
                      +++=....+..+.++ +++.|  +.+++.++.+=..+.+..+... +.++...+||.   ...++.+. .....+-+-++
T Consensus        53 f~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rt---Y~~la~~t-~gtmGLsn~Sl  127 (367)
T KOG1582|consen   53 FLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRT---YVILAFLT-VGTMGLSNGSL  127 (367)
T ss_pred             HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhH---hhhhHhhh-hhccccCcCcc
Confidence            344445555555542 45654  3455555554433333332211 11122234444   44444444 55566666888


Q ss_pred             hccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCCCCCCCCCCCCCC
Q 016580          105 KYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSGGAGSHHGSSVDS  184 (387)
Q Consensus       105 ~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (387)
                      .|++-..-.++.++--+-+++.+.++.+.|.++.+      ..+..+..+|.++..+.++.                  .
T Consensus       128 gYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs~------------------~  183 (367)
T KOG1582|consen  128 GYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADSQ------------------T  183 (367)
T ss_pred             ccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhcccc------------------c
Confidence            88888777788888888899999999999999996      99999999999999887643                  3


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhccCccccccc---chhhHHHH
Q 016580          185 SDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYP-AELSLSTLICLMGVVEGAAVSLIMERDMSAWKIG---FDSRLLAA  260 (387)
Q Consensus       185 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~  260 (387)
                      .++.+..|+.+.-.|-++-|.---.+++..+.++ +..++.++....|.+.+.........-...|+.-   +.......
T Consensus       184 sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~  263 (367)
T KOG1582|consen  184 SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYA  263 (367)
T ss_pred             CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHH
Confidence            5677788998888888888877777888888766 3567788888899888887776655544445431   22233333


Q ss_pred             HHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          261 AYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       261 ~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      +..+. ++.++......-++..++..++.+....-.+++++++++|..++|.....|..+++.|+++-.+.++.
T Consensus       264 ~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  264 FLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            33343 35666666666788899999999999999999999999999999999999999999999998887743

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.19  E-value=1.2e-08  Score=95.52  Aligned_cols=299  Identities=13%  Similarity=0.093  Sum_probs=183.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHHHHHH-HHHHHhhh---cCCCCCCHHHHHHHHHHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLKHGMS--HYVLAVYRHVVATIVLA-PFAFVLER---KIRPKLTLPVFLRIMALG   89 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~--p~~~~~~r~~~~~l~l~-~~~~~~~~---~~~~~~~~~~~~~~~~~g   89 (387)
                      -..|++..+++.++||+.++..|..  +.++  .++.+  -.+++.++.- ....+..+   ......+.+.+...++.|
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~W~v--~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV--KKWSWETMWSV--GGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc--CCCchhHHHHH--HHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            4579999999999999999999996  5454  33221  1112222111 01111111   112234667788888888


Q ss_pred             HhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhcccc---ceeeccccchhhHHHHHhhhhhhhhhccCc
Q 016580           90 FLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETV---NVRRLQSLAKVIGTAVTVAGAMVMTLYKGP  165 (387)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~---~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~  165 (387)
                      ++- ..++..++.++++...+.+..+ ..++-+...++..++++|-.   +..+  ...-.+|+++.++|+++.......
T Consensus        81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence            887 9999999999999999999877 88899999999999999765   2221  122377888899999998763321


Q ss_pred             cccccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHH-------HHHHHHhccCCCchHHHHHHHH---HHHHHH
Q 016580          166 IINFTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFF-------ILQSFTLKKYPAELSLSTLICL---MGVVEG  235 (387)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~~v~~  235 (387)
                      .        |.+ ++.+...+....+|+.+++++++.++.|.       ...+...+...++......+..   .+..+.
T Consensus       158 k--------~~~-~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        158 K--------ERK-MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             c--------ccc-cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence            1        000 00000234567899999999999999999       4433322111123333333332   333322


Q ss_pred             H-HHHHH---hccCcccccc--cc----hhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEee---cc-hhHHHHHHHH
Q 016580          236 A-AVSLI---MERDMSAWKI--GF----DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTS---FS-PLCMIITSAL  301 (387)
Q Consensus       236 ~-~~~~~---~~~~~~~~~~--~~----~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pv~~~~~  301 (387)
                      - .+..+   ..+.......  .+    .......+..|++ -.+++.++..+-.+.+......   +. .+..+++.+.
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            2 22221   1111110111  11    1122222444443 6777778888877776554433   34 7888999999


Q ss_pred             HHHHhhcccc------hhhhhhHHHHHhhhhheeecc
Q 016580          302 GVIILAELVH------LGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       302 ~~~~~~e~~t------~~~~~G~~li~~g~~l~~~~~  332 (387)
                      +. +++|.=+      ...++|++++++|.++.....
T Consensus       308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            98 5999755      446899999999988876543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.18  E-value=6.6e-11  Score=94.04  Aligned_cols=104  Identities=16%  Similarity=0.310  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHH
Q 016580           52 VYRHVVATIVLAPFAFVLERKI--RPKLTLPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAII  129 (387)
Q Consensus        52 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~  129 (387)
                      .+|+.++.+++..+...+++.+  .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5799999999998887754321  22233455666777788886699999999999999 58889999999999999999


Q ss_pred             HhccccceeeccccchhhHHHHHhhhhhhhhhc
Q 016580          130 FRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLY  162 (387)
Q Consensus       130 ~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~  162 (387)
                      ++|||++.+      +++++.++++|++++...
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence            999999999      599999999999999754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.16  E-value=4.3e-10  Score=94.38  Aligned_cols=138  Identities=17%  Similarity=0.141  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccC------CCchHHHHHHHHHHHHHHHHHHHHhccCccc-----ccc---c-chhh
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKY------PAELSLSTLICLMGVVEGAAVSLIMERDMSA-----WKI---G-FDSR  256 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~---~-~~~~  256 (387)
                      |.++++.|.++.|++.++.|+..++.      .++..+..+....+.+.+.+.....|.....     ...   . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999998872      2689999999999999999998877653211     100   0 2234


Q ss_pred             HHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          257 LLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       257 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      +..++..|++ ....++..+..+++++|...++...+..+...++++++++|++|+.+++|.++.+.|.++++|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555555654 677788889999999999999999999999999999999999999999999999999998875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.14  E-value=2.9e-09  Score=98.80  Aligned_cols=275  Identities=14%  Similarity=0.148  Sum_probs=158.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCHHHH-HHHHHHHHhH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRP-KLTLPVF-LRIMALGFLE   92 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~-~~~~~~g~~~   92 (387)
                      ....|.+++++++++-+.+..+.|....+ .+.                       ...+. ...++.+ ...++.|++.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence            34679999999999999999999998421 110                       00011 0011111 2345566666


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCC
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG  172 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~  172 (387)
                      ..++..+-+.|+.+.|.+..+++..+.-++.++++..++|||++.++      +.|..+++.|..++.....++.     
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~~~~~~-----  128 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIFAPKEE-----  128 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEeCCCCC-----
Confidence            67888899999999999999999999999999999999999999996      9999999999988764432210     


Q ss_pred             CCCCCCCCCCCC---CCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHH---HHH-HhccC
Q 016580          173 GAGSHHGSSVDS---SDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAA---VSL-IMERD  245 (387)
Q Consensus       173 ~~~~~~~~~~~~---~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~-~~~~~  245 (387)
                          +..+.++-   ..+......... ...+...+.....+|..++  +..........+++...+.   +.. +....
T Consensus       129 ----~~~t~~~l~~~~~~~~fl~y~~~-~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~  201 (300)
T PF05653_consen  129 ----PIHTLDELIALLSQPGFLVYFIL-VLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTF  201 (300)
T ss_pred             ----CcCCHHHHHHHhcCcceehhHHH-HHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHh
Confidence                00000000   000011111111 1112222222222222222  1111111111222211111   110 11110


Q ss_pred             cccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchh-HHHHHHHHHHHHhhcc--cchh----hhhhH
Q 016580          246 MSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPL-CMIITSALGVIILAEL--VHLG----SILGA  318 (387)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pv~~~~~~~~~~~e~--~t~~----~~~G~  318 (387)
                      ..+.....+..|..++.+ +.+......+.++++++.+++.+.++.+. -...+++-|.++++|.  .++.    ..+|+
T Consensus       202 ~g~~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~  280 (300)
T PF05653_consen  202 SGDNQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGF  280 (300)
T ss_pred             cCchhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHH
Confidence            011111222344444433 33456666778999999999999988885 4555666677778875  4443    46888


Q ss_pred             HHHHhhhhheeecc
Q 016580          319 ILIVFGLYTVVWGK  332 (387)
Q Consensus       319 ~li~~g~~l~~~~~  332 (387)
                      .+++.|+++++..|
T Consensus       281 ~~ii~GV~lL~~~~  294 (300)
T PF05653_consen  281 LIIIIGVFLLSSSK  294 (300)
T ss_pred             HHHHHhhheeeccC
Confidence            99999999886544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.08  E-value=3.7e-09  Score=98.59  Aligned_cols=137  Identities=13%  Similarity=0.139  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLD   96 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   96 (387)
                      ..|.++.++++++|+...+..|.. .++.++...... ..++.+++.++......  ....++..+...+..|++...++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRA-GAEHGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999998 467788776544 45566666666554322  12234555656678889888999


Q ss_pred             HHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhcc
Q 016580           97 QNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYK  163 (387)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~  163 (387)
                      +.++++++++.+++.++++.++.|+++.++++++++|+++..      +++|..+.++|++......
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999      5999999999999886543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.07  E-value=1.3e-09  Score=101.73  Aligned_cols=138  Identities=15%  Similarity=0.118  Sum_probs=109.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCccccc--ccchhhHHHHHHhhh
Q 016580          188 HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWK--IGFDSRLLAAAYSGV  265 (387)
Q Consensus       188 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~  265 (387)
                      +..+|+++.+++++.|+...+..|.. .+.+ |....+++..++.+.+.+......+ .....  ......+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence            45689999999999999999999764 5555 8999999999998877776543321 11110  00122232 233555


Q ss_pred             hhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          266 VCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       266 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                      +..+..+.++++++++.++..++++.++.|+++.++++++++|+++..+++|.++.+.|+.++.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5578889999999999999999999999999999999999999999999999999999988765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.06  E-value=2.7e-09  Score=98.92  Aligned_cols=134  Identities=13%  Similarity=0.110  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHH
Q 016580          193 TLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAY  272 (387)
Q Consensus       193 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  272 (387)
                      .++.+.++++||..+++.|+..++.+ +  ...+....+.+.+.|+...... ...|+..+. .++.....+.+.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            56789999999999999998877733 3  3455566667777776644211 123333233 33434444444588889


Q ss_pred             HHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          273 YVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       273 ~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      .++++++++.++..++++.++.|+++.++++++++|+++..+++|.++++.|+++....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.05  E-value=4.8e-09  Score=97.85  Aligned_cols=137  Identities=15%  Similarity=0.129  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLD   96 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   96 (387)
                      ..|.++.++++++|+...+..|.. .+ -++....++...++.+.+.++............+...+......+++...+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999997 33 3456667788888888887776543222111234577778888888887899


Q ss_pred             HHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           97 QNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      +.++++++++.+++.++++..+.|++++++++++++|+++..      +++|..+.+.|+++...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999      59999999999998864

>TIGR00688 rarD rarD protein

Probab=99.02  E-value=2.5e-09  Score=97.83  Aligned_cols=136  Identities=13%  Similarity=0.167  Sum_probs=108.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCc---ccccccchhh-HHHHHHhhhh
Q 016580          191 TGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDM---SAWKIGFDSR-LLAAAYSGVV  266 (387)
Q Consensus       191 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~  266 (387)
                      +|..+.++++++|+...+..|. ..+.+ |.++.+++++++.+.+.++.....+..   ..++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999997 44555 899999999999888777654432210   1111111222 3445555654


Q ss_pred             hhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                       .+..+.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence             77889999999999999999999999999999999999999999999999999999988664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.96  E-value=2.2e-08  Score=95.43  Aligned_cols=140  Identities=9%  Similarity=0.136  Sum_probs=106.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhhcC---C-CCCCHHHHHHHHHHHHh
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSH-YVLAVYRHVVATIVLAPFAFVLERKI---R-PKLTLPVFLRIMALGFL   91 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p-~~~~~~r~~~~~l~l~~~~~~~~~~~---~-~~~~~~~~~~~~~~g~~   91 (387)
                      ..|..++++++++|+...++.|... +..++ ...+++...++.+.+.++.....+..   + ...+.. ....+..+++
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            4588999999999999999999885 55544 46666766666666655554433221   1 112222 2223334554


Q ss_pred             HHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCc
Q 016580           92 EPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGP  165 (387)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~  165 (387)
                      . .+++.++++++++.+++.+++..++.|+++.++++++++|+++..      +++|.++.+.|++++...++.
T Consensus       266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhhhh
Confidence            4 678899999999999999999999999999999999999999999      599999999999998765443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.93  E-value=2.1e-08  Score=93.65  Aligned_cols=133  Identities=15%  Similarity=0.168  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLD   96 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   96 (387)
                      ..|.+++++++++|+...+..|.. .++.++....+   ....+++.+.... ........++..+...+..++. .++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~-t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAAAA-MGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHHHH-HHHH
Confidence            458999999999999999999998 46777766532   2233333332222 2221223456667777666654 4889


Q ss_pred             HHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           97 QNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      +.++++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.+.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999      59999999999988754

>TIGR00803 nst UDP-galactose transporter

Probab=98.87  E-value=1.3e-08  Score=91.02  Aligned_cols=206  Identities=12%  Similarity=0.008  Sum_probs=125.1

Q ss_pred             chhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccc-------cccCCCCCCCCCCC
Q 016580          109 ATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPII-------NFTSGGAGSHHGSS  181 (387)
Q Consensus       109 ~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~-------~~~~~~~~~~~~~~  181 (387)
                      ........+..++++++..+.+.+++++..      |+++..+...|+......+.+..       -....+.+..  ..
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~--~~   75 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS--SA   75 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC--Cc
Confidence            344556677888888888888888888855      68888888888775433221100       0000000000  00


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHH----HHHh-ccC-cccccccchh
Q 016580          182 VDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAV----SLIM-ERD-MSAWKIGFDS  255 (387)
Q Consensus       182 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~-~~~-~~~~~~~~~~  255 (387)
                      ..........|....+.+.++-++-.++.++..|+.+..    .|...+......+.    .... +.+ ...+...  .
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~  149 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--I  149 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--c
Confidence            011223556788888888888888888888876664322    22222222222111    1111 111 0111100  0


Q ss_pred             hHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          256 RLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       256 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                      .+....+..++..+++..+....+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       150 ~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       150 GYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             CCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1111111122235667778889999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.81  E-value=1.5e-07  Score=88.05  Aligned_cols=138  Identities=13%  Similarity=0.221  Sum_probs=106.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCh---HHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCCHHHHHHHHHH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSH---YVLAVYRHVVATIVLAPFAFVLERK-----IRPKLTLPVFLRIMAL   88 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p---~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~   88 (387)
                      ..|.+++++++++|+...++.|... +..++   ....++-...+.+.+..........     .+...+...+...+..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            4699999999999999999999973 33332   2333333334333333332222211     1123466778888889


Q ss_pred             HHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           89 GFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        89 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      +++..++.+.++++++++.+++.++.+..+.|++..++++++++|+++..      +++|..+.++|+++...
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence            99988999999999999999999999999999999999999999999999      59999999999988753

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.79  E-value=7.9e-08  Score=77.57  Aligned_cols=122  Identities=13%  Similarity=0.107  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhH
Q 016580          191 TGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGI  270 (387)
Q Consensus       191 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  270 (387)
                      .|.++.+.+.++-+..+++.|+-.++.++ ...... .    ...+. ..   .        .   ....++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~~~-~~---~--------~---p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAALL-AF---G--------L---ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHHHH-HH---h--------c---cHHHHHHHHHHHHH
Confidence            36788899999999999999998887653 221111 0    00000 00   0        0   11246678888999


Q ss_pred             HHHHHHHHHhcCCceeEeecchhHHHHHHHHHHH--HhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          271 AYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVI--ILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       271 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~--~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      ++++|.+++++.+++.+.++....+++..+.++.  +++|++|+.+++|+++|++|++++.+.++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999988888888875  79999999999999999999999875444

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.76  E-value=2.4e-08  Score=79.22  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHH
Q 016580          226 LICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVII  305 (387)
Q Consensus       226 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~  305 (387)
                      +...++.+....+.....+....++......+...+..|++....++.++.+++++.++ .++.+..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            45556666666655543322122222222455666666776556899999999999995 88899999999999999999


Q ss_pred             hhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          306 LAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       306 ~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      ++|+++..+++|.+++++|++++.+.+..
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999998876544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.75  E-value=3.5e-09  Score=91.81  Aligned_cols=277  Identities=18%  Similarity=0.227  Sum_probs=193.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQ   97 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   97 (387)
                      ..++.+++-++.||+........   +-.|.+.+...-+.+.++.+.+++.    ..|..+.+.+...++.|.+- ..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence            35788999999999998887665   4567777655555555544444433    23455667777777777776 8999


Q ss_pred             HHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhH---HHHHhhhhhhhhhccCccccccCCC
Q 016580           98 NLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIG---TAVTVAGAMVMTLYKGPIINFTSGG  173 (387)
Q Consensus        98 ~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g---~~~~~~Gv~l~~~~~~~~~~~~~~~  173 (387)
                      ...+.|+++.+++.+.++ ..++-+-+.+++++.++|..+..+     ..+|   +++.+.|+++....+.++       
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~~~n-------  141 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQDRNN-------  141 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeecccc-------
Confidence            999999999999999988 566667799999999999988875     4443   456666777765433211       


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q 016580          174 AGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGF  253 (387)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  253 (387)
                             ......+....|....+.+.+.|-.|.+..+.+.  .+ ...... -...+.+......-....+..     .
T Consensus       142 -------k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiL-PqAiGMv~~ali~~~~~~~~~-----~  205 (288)
T COG4975         142 -------KEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAIL-PQAIGMVIGALILGFFKMEKR-----F  205 (288)
T ss_pred             -------ccccChHhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhh-HHHHHHHHHHHHHhhcccccc-----h
Confidence                   0112334466899999999999999999866543  22 233222 223343333333322222111     2


Q ss_pred             hhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhh----hhhHHHHHhhhhhee
Q 016580          254 DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGS----ILGAILIVFGLYTVV  329 (387)
Q Consensus       254 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~----~~G~~li~~g~~l~~  329 (387)
                      ++..+.-...|++ -+.++..+..+-++.+..+.=.++.+..+++.+-+.++++|+=|..+    ++|.++++.|..+..
T Consensus       206 ~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         206 NKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            2233444556765 78889999999999999988889999999999999999999988876    578888888877665


Q ss_pred             ec
Q 016580          330 WG  331 (387)
Q Consensus       330 ~~  331 (387)
                      ..
T Consensus       285 ~~  286 (288)
T COG4975         285 IA  286 (288)
T ss_pred             ee
Confidence            43

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.69  E-value=1e-07  Score=89.33  Aligned_cols=139  Identities=14%  Similarity=0.236  Sum_probs=107.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhC--CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---------CCHH-HHHH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKH--GMSHYVLAVYRHVVATIVLAPFAFVLERKIRPK---------LTLP-VFLR   84 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~~-~~~~   84 (387)
                      ..|.+++++++++|+...+..|... +  +.+|..+.++....++++++|+...........         .... .+..
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4699999999999999999999984 5  799999999999999999999876533211000         0001 1111


Q ss_pred             HHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhc
Q 016580           85 IMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLY  162 (387)
Q Consensus        85 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~  162 (387)
                      .+..+.......+.+++++++++++..++++..+.|+++.++++++++|+++..      +++|..++++|+++....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHHH
Confidence            222333233445567778999999999999999999999999999999999999      599999999999998643

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.65  E-value=9.5e-07  Score=73.93  Aligned_cols=133  Identities=20%  Similarity=0.294  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhC------CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCC----C-------CHHH
Q 016580           19 PYLAIISLQFGYAGMYIITMVSLKH------GMSHYVLAVYRHVVATIVLAPFAFVLERKIRPK----L-------TLPV   81 (387)
Q Consensus        19 ~~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~   81 (387)
                      |.++++.++++.+...+..|..+++      ..++..+..+....+.+++++.+...++.....    .       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678999999999999999998855      789999999999999999999887765443110    0       2244


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhh
Q 016580           82 FLRIMALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMV  158 (387)
Q Consensus        82 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l  158 (387)
                      +...+..|++. .+.+.+.+..++++++...+++.....+++.++++++++|+++..      +++|+.++++|+++
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            45555566666 899999999999999999999999999999999999999999999      59999999999876

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.62  E-value=6.4e-07  Score=85.60  Aligned_cols=139  Identities=14%  Similarity=0.095  Sum_probs=105.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhh
Q 016580          190 FTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSG  269 (387)
Q Consensus       190 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  269 (387)
                      ..-..+.++--.+...+++..|...+..+-|..++.+++.++.+.+...........+.+. .....|..++..|++ +.
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~-~~  125 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLC-HL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHH-HH
Confidence            3344444444455567788888888887768999999999998776554322111111111 123366778888886 55


Q ss_pred             HHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          270 IAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       270 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      ..+...+.++++.+++.++++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            5677788999999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.57  E-value=1.1e-06  Score=69.28  Aligned_cols=69  Identities=17%  Similarity=0.205  Sum_probs=62.9

Q ss_pred             HHHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           86 MALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        86 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      ...++++++++..++..++++.|.+.+..+.++.++++.+++++++||+++.+      |++|+.+.++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            34455677889999999999999999999988999999999999999999999      6999999999999875

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.48  E-value=5.2e-07  Score=71.02  Aligned_cols=67  Identities=16%  Similarity=0.158  Sum_probs=61.6

Q ss_pred             hhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          264 GVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       264 g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      ++++.+++++++..++++.+...+-.+.++.++++.+++++++||++++.+++|.++++.|++++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3355788999999999999999999999999999999999999999999999999999999987653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.47  E-value=3e-06  Score=78.86  Aligned_cols=128  Identities=12%  Similarity=0.131  Sum_probs=102.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHH----HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhH
Q 016580           17 FKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHV----VATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLE   92 (387)
Q Consensus        17 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   92 (387)
                      .+|+++.+++.+.++...+..|..   +.+|...++....    .+.+++.++    ++. ++. ..+..+..+..|++-
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~-~~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH----ILA-KPL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH----hcc-cch-HHHHHHHHHHHHHHH
Confidence            569999999999999999999986   3888888666555    444333333    111 122 334555566688885


Q ss_pred             HHHHHHHHHHhhh-ccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchh----hHHHHHhhhhhhhh
Q 016580           93 PVLDQNLYYLGMK-YTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKV----IGTAVTVAGAMVMT  160 (387)
Q Consensus        93 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~----~g~~~~~~Gv~l~~  160 (387)
                       .+.+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.++++      +    +|.++.+.|+.++.
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG  287 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence             999999999999 9999999999999999999999999999999995      8    99999999998875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.46  E-value=5.2e-06  Score=76.81  Aligned_cols=134  Identities=16%  Similarity=0.243  Sum_probs=106.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAV-YRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPV   94 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (387)
                      ...|.++.++++++|+...+..|...  ..++..... +......++..+...  .... .....+.+......|++..+
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHH
Confidence            35799999999999999999999883  566666665 333322222222221  1111 34456788888889999866


Q ss_pred             HHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           95 LDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      ..+.++++++++.+++..+++..+.|++..++++++++|+++..      +++|+.+.+.|+.+..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~  286 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999      4999999999998875

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.46  E-value=5e-07  Score=81.92  Aligned_cols=270  Identities=12%  Similarity=0.120  Sum_probs=164.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCCHHHHHHHHHHHHhH
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKI-RPKLTLPVFLRIMALGFLE   92 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~   92 (387)
                      .+...|.++++.+.++.|.++.+.|..+.+ ...   ...               +.... .+.+  +  -+..+.|++.
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~---------------ra~~gg~~yl--~--~~~Ww~G~lt   73 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGL---------------RAGEGGYGYL--K--EPLWWAGMLT   73 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hcc---------------cccCCCcchh--h--hHHHHHHHHH
Confidence            455689999999999999999999998522 111   000               10111 1111  1  1345667887


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccCccccccCC
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPIINFTSG  172 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~~~~~  172 (387)
                      ..++..+-|.|+.+.|.+..+++..++-++.++++..+++|+++..+      .+|..++++|-.+++. +.+.+     
T Consensus        74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~-haP~e-----  141 (335)
T KOG2922|consen   74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI-HAPKE-----  141 (335)
T ss_pred             HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE-ecCcc-----
Confidence            78899999999999999999999999999999999999999999997      9999999999888753 32221     


Q ss_pred             CCCCCCCCCCCC-------CCCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH-----HHHH-
Q 016580          173 GAGSHHGSSVDS-------SDSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEG-----AAVS-  239 (387)
Q Consensus       173 ~~~~~~~~~~~~-------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~-  239 (387)
                            ++....       .+..+.. ....+.-.  ..+-....+.. ..+.+.+.......+.|..-.     +..+ 
T Consensus       142 ------~~i~t~~el~~~~~~~~Fli-y~~~iil~--~~il~~~~~p~-~g~tnilvyi~i~s~iGS~tV~svKalg~ai  211 (335)
T KOG2922|consen  142 ------QEIESVEEVWELATEPGFLV-YVIIIILI--VLILIFFYAPR-YGQTNILVYIGICSLIGSLTVMSVKALGIAI  211 (335)
T ss_pred             ------cccccHHHHHHHhcCccHHH-HHHHHHHH--HHHHheeeccc-ccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence                  000000       0111111 11111111  11111111111 111123443333333332111     1111 


Q ss_pred             -HHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecch-hHHHHHHHHHHHHhhccc--chh--
Q 016580          240 -LIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSP-LCMIITSALGVIILAELV--HLG--  313 (387)
Q Consensus       240 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~--t~~--  313 (387)
                       .......+.   ..+..|..++.+..+ ...-....++|++..++..++++.+ +-..++++-+.++|+|--  +..  
T Consensus       212 klt~~g~~ql---~~~~ty~~~l~~~~~-~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i  287 (335)
T KOG2922|consen  212 KLTFSGNNQL---FYPLTWIFLLVVATC-VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI  287 (335)
T ss_pred             HHHhcCCccc---ccHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence             111111111   122456665555553 5666677799999999999998887 556677788888898853  332  


Q ss_pred             --hhhhHHHHHhhhhheeecc
Q 016580          314 --SILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       314 --~~~G~~li~~g~~l~~~~~  332 (387)
                        ..+|+..++.|++++...|
T Consensus       288 ~~~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  288 AGELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHHHhHHHhhheeeEeeeec
Confidence              4789999999999885444

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.42  E-value=2e-06  Score=77.20  Aligned_cols=143  Identities=11%  Similarity=0.111  Sum_probs=115.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCccccc-ccchhhHHHHHHhhhh
Q 016580          188 HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWK-IGFDSRLLAAAYSGVV  266 (387)
Q Consensus       188 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~  266 (387)
                      +...|+++.+.|-+.|+..-.+.|-+ +..+ +.++..++.+.+....+.+.....+....+. ...+..+......++.
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            34579999999999999988887764 5546 6889999999998888777665544322222 1233456666666665


Q ss_pred             hhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                       ....+..|.++.++....++|.=++.+|++.+++|.++++|+++..|++..++..+|+....+...
T Consensus        82 -i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          82 -IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             -HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence             678889999999999999999999999999999999999999999999999999999988776443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.36  E-value=7.4e-06  Score=66.15  Aligned_cols=119  Identities=16%  Similarity=0.181  Sum_probs=90.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQ   97 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   97 (387)
                      .++++.+++.++-+...++.|... ++.+....... . .      ..... .         ......+..|++.+++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~-~------~~~~~-~---------~~p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F-I------AALLA-F---------GLALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H-H------HHHHH-H---------hccHHHHHHHHHHHHHHH
Confidence            478899999999999999999995 44443332211 0 0      00000 0         000125677888889999


Q ss_pred             HHHHHhhhccCchhHHHhhchhHHHHHHHHHH--HhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           98 NLYYLGMKYTTATFASATVNILPAVTFILAII--FRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~--~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      .+|.+++++.|.+.+..+.+..++++.+.++.  ++||+++..      |++|+.+.++|++++..
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence            99999999999999999999998888888885  899999999      59999999999999863

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.31  E-value=1.7e-05  Score=74.43  Aligned_cols=144  Identities=15%  Similarity=0.073  Sum_probs=114.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHH
Q 016580           13 ALSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKL--TLPVFLRIMALGF   90 (387)
Q Consensus        13 ~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~   90 (387)
                      ..++.+|.++++++++++|.+.++.+... ++.++.++..+-.+++.++..+.+...++......  +++....++..++
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence            45778999999999999999999999995 78899999999999999988888777666654433  3333333233333


Q ss_pred             hHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhccC
Q 016580           91 LEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKG  164 (387)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~  164 (387)
                      +. ...+.+.-..+++++++...+=.-++.++..++.++++|+++++.      .++|.++.++|.++....+.
T Consensus       242 ~l-f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  242 CL-FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HH-HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEccCC
Confidence            33 556667778889999988877778889999999999999999998      59999999999999865544

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.17  E-value=2.8e-05  Score=68.23  Aligned_cols=137  Identities=12%  Similarity=0.114  Sum_probs=115.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPV   94 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (387)
                      -...|..+++.+..+|+.+.+..|.. .+..+.-.-+..-+.+++++.+|+-......  .-.++......+..++++..
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSSa  221 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSSA  221 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhcc
Confidence            34578999999999999999999998 4456666667788889999999987643222  23356777778889999989


Q ss_pred             HHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           95 LDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      +-+.+=..++++.|....+++.++.|.+.++.++++++|+++..      ||.++...+.+..=.+
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~  281 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST  281 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999      5999998887766443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.97  E-value=0.0001  Score=66.63  Aligned_cols=118  Identities=13%  Similarity=0.067  Sum_probs=90.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHH
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEP   93 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (387)
                      .+..++++.++++++.+....++.|..   +.+|....+-..+...+.-..+.... ++   ....+..++-++.|++- 
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~---~~~~k~~~~nil~G~~w-  205 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KK---PFFEKKSWKNILTGLIW-  205 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-cc---cccccchHHhhHHHHHH-
Confidence            445689999999999999999998886   57888776655444444434443332 21   12223445556667776 


Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceee
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRR  139 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~  139 (387)
                      ..++.+++.+.+....+.+..+.++..++..+.+.+++||+-++++
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke  251 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE  251 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence            9999999999999999999999999999999999999999988774

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.95  E-value=0.002  Score=59.71  Aligned_cols=300  Identities=14%  Similarity=0.163  Sum_probs=181.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHH-hhhcC----CCCCCHHHHHHHHHHHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFV-LERKI----RPKLTLPVFLRIMALGF   90 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~----~~~~~~~~~~~~~~~g~   90 (387)
                      -..|+++..+..++-++.++..|..  ++++-...=.+..+++.+++ |+... ..-+.    ....+...+....+.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            4579999999999999999999998  66665554444555555443 33222 11111    12335566777777888


Q ss_pred             hHHHHHHHHHHHhhhccCchhHH-HhhchhHHHHHHHHHHHhccccc-eeeccccchhhHHHHHhhhhhhhhhccCcccc
Q 016580           91 LEPVLDQNLYYLGMKYTTATFAS-ATVNILPAVTFILAIIFRLETVN-VRRLQSLAKVIGTAVTVAGAMVMTLYKGPIIN  168 (387)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~~la~~~l~e~~~-~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~~  168 (387)
                      +- +++...|=.+++|+..+... +...+..++..++-.++.++--. ..++..+..++|++++++|+.+....+.... 
T Consensus        82 lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke-  159 (344)
T PF06379_consen   82 LW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE-  159 (344)
T ss_pred             HH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh-
Confidence            87 88999999999999999885 55788888888887776543210 1112233458999999999999975442221 


Q ss_pred             ccCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHh------ccCC-Cc----hHHHHHHHHHHHHHHHH
Q 016580          169 FTSGGAGSHHGSSVDSSDSHFFTGTLMLIGSCFGWAGFFILQSFTL------KKYP-AE----LSLSTLICLMGVVEGAA  237 (387)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~------~~~~-~~----~~~~~~~~~~~~v~~~~  237 (387)
                             .+. + ....+.+...|++.+++|++..|.+++-...-.      .... +|    .......+.-+.+.-..
T Consensus       160 -------~~~-~-~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~  230 (344)
T PF06379_consen  160 -------KEL-G-EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI  230 (344)
T ss_pred             -------hhh-c-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH
Confidence                   000 1 112344567899999999999888877543211      1111 11    11222334444555555


Q ss_pred             HHHHhc---cCcc---cccccc---hhhHHHHHHhhhhhhhHHHHHHHHHHhcCCc----eeEeecchhHHHHHHHHHHH
Q 016580          238 VSLIME---RDMS---AWKIGF---DSRLLAAAYSGVVCSGIAYYVQGFVSKQKGP----VFVTSFSPLCMIITSALGVI  304 (387)
Q Consensus       238 ~~~~~~---~~~~---~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~----~~~s~~~~~~pv~~~~~~~~  304 (387)
                      ++++..   ++..   +.....   .......+..|.+ -...+.+|..+-.+.+.    .--.+.+.+..+++-+++.+
T Consensus       231 yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~  309 (344)
T PF06379_consen  231 YCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI  309 (344)
T ss_pred             HHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence            554432   1211   111111   1233334444443 55566666666666653    33456677888888899855


Q ss_pred             Hhhcc------cchhhhhhHHHHHhhhhheeec
Q 016580          305 ILAEL------VHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       305 ~~~e~------~t~~~~~G~~li~~g~~l~~~~  331 (387)
                       ++|.      .-..-++|+++++.+++++-+.
T Consensus       310 -lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  310 -LKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             -HHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence             6663      2234588999999988876554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.93  E-value=0.00015  Score=68.03  Aligned_cols=132  Identities=18%  Similarity=0.079  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHhccCC-C--chHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHH
Q 016580          203 WAGFFILQSFTLKKYP-A--ELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVS  279 (387)
Q Consensus       203 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~  279 (387)
                      +..+.+.+++..++.. .  |..+++.++....+...+..........     ....+...+..+++ ..++..+.+.++
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~al   85 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKYAILSFL-FFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHHHHHHHH-HHHHHHHHHHHH
Confidence            3445577777776533 3  6788888888888777765544331111     11234444455554 788889999999


Q ss_pred             hcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCCCCCCC
Q 016580          280 KQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPSSA  340 (387)
Q Consensus       280 ~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~~~~~~  340 (387)
                      ++.+...-.+.....|+.++++++++++++.+..++++.+++.+|+.+....+.++.+..+
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~  146 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSN  146 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccc
Confidence            9999999999999999999999999999999999999999999999999887665544443

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.92  E-value=9.1e-05  Score=58.75  Aligned_cols=68  Identities=18%  Similarity=0.305  Sum_probs=57.8

Q ss_pred             hhhhhHHHHHHHHHHhcCCceeEeec-chhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          265 VVCSGIAYYVQGFVSKQKGPVFVTSF-SPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       265 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      +.+.+++++++..++++.+...+=.+ ..+..+.+.+.++++++|++++.+++|.++|+.|++.+....
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33468899999999999998766555 457888999999999999999999999999999999885444

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.76  E-value=0.00031  Score=57.56  Aligned_cols=132  Identities=15%  Similarity=0.027  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHH
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIA  271 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  271 (387)
                      ..++++.+++.-++...++.++.++..+|...+++.+..+++.+..+..+.+..  .+.......|+..+ -|++ +...
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence            357888999999999999999998877789999999999999998887766543  22221222333332 4444 6777


Q ss_pred             HHHHHHHHhcCCceeEeecch-hHHHHHHHHHHH----HhhcccchhhhhhHHHHHhhhhh
Q 016580          272 YYVQGFVSKQKGPVFVTSFSP-LCMIITSALGVI----ILAELVHLGSILGAILIVFGLYT  327 (387)
Q Consensus       272 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~----~~~e~~t~~~~~G~~li~~g~~l  327 (387)
                      ..+..+.+++.++.....+.. -+.+.+.+++.+    .-.+++++.+++|.++++.|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            788888999999876555443 566667777765    12456899999999999999864

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.64  E-value=2.8e-05  Score=68.77  Aligned_cols=138  Identities=15%  Similarity=0.109  Sum_probs=111.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHH
Q 016580           15 SKFKPYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPV   94 (387)
Q Consensus        15 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (387)
                      ....+.+.++.+++.-+..+++.|+. .+..+.+..+.+-.+++.+.-+..+.......+| ..+++++....+|+++ .
T Consensus       188 ~~~~gt~aai~s~lf~asvyIilR~i-Gk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lGvfg-f  264 (346)
T KOG4510|consen  188 YDIPGTVAAISSVLFGASVYIILRYI-GKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLGVFG-F  264 (346)
T ss_pred             ccCCchHHHHHhHhhhhhHHHHHHHh-hccccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEehhhh-h
Confidence            34567888999999999999999998 5777766666666666666665555443333344 3678888889999999 9


Q ss_pred             HHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           95 LDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      +++++.-.+++.--++-+++..++..++..+.-.+|+++.+|+..      |.|+++.+...+.+..
T Consensus       265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws------~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWS------WVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHH------hhceeeeehhHHHHHH
Confidence            999999999999999999999999999999999999999999995      9888877766665543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.60  E-value=0.0003  Score=65.50  Aligned_cols=121  Identities=19%  Similarity=0.204  Sum_probs=90.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHhccCCC-chHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhh
Q 016580          187 SHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPA-ELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGV  265 (387)
Q Consensus       187 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  265 (387)
                      .+...|..+++.++++.+....++|+...+.+. +..-.                  ......+   ....|+.    |+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------------------~~~~~~l---~~~~W~~----G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------------------SGGRSYL---RRPLWWI----GL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------------------chhhHHH---hhHHHHH----HH
Confidence            456789999999999999999999998776442 11100                  0000011   1112332    22


Q ss_pred             hhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          266 VCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       266 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      +...++..+.+.++...+++.++++..+..++..+++.++++|+++...++|+++++.|..+.....
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            2345566777889999999999999999999999999999999999999999999999988776544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.55  E-value=0.00021  Score=55.90  Aligned_cols=67  Identities=15%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             hhhhHHHHHHHHHHhcCCceeEeec-chhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          266 VCSGIAYYVQGFVSKQKGPVFVTSF-SPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       266 ~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      .+.+++++++..++++.+...+=.+ ..+..+.+.++++++|+|++++.+++|+++|+.|++......
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3467888899999999887765444 446888889999999999999999999999999999986543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.46  E-value=0.0004  Score=55.08  Aligned_cols=68  Identities=18%  Similarity=0.174  Sum_probs=60.6

Q ss_pred             HHHhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           88 LGFLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        88 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      ..+..++.++.++..++++.|.+.+..+ ..+.-+.+.++++++++|+++..      |++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            4455568899999999999999999766 57999999999999999999999      69999999999998854

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.41  E-value=0.0025  Score=49.65  Aligned_cols=64  Identities=17%  Similarity=0.099  Sum_probs=56.9

Q ss_pred             HhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhh
Q 016580           90 FLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVM  159 (387)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~  159 (387)
                      +..+.+++.++..++++.|.+.+..+ .....+.+.+++++++||+++..      |++++.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            44457899999999999999988654 77899999999999999999999      599999999999886

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.40  E-value=0.00055  Score=52.53  Aligned_cols=66  Identities=20%  Similarity=0.183  Sum_probs=58.7

Q ss_pred             HHhHHHHHHHHHHHhhhccCchhHH-HhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           89 GFLEPVLDQNLYYLGMKYTTATFAS-ATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        89 g~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      .++++.+++.++-.++++.|.+.+. +......+-+.+.++++++|+++..      |++++.+.++|++.+-
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            4445578999999999999999885 5588999999999999999999999      6999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.38  E-value=0.00066  Score=53.11  Aligned_cols=68  Identities=18%  Similarity=0.168  Sum_probs=60.1

Q ss_pred             HHHhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           88 LGFLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        88 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      ..++.++++..++..++++.|.+.+..+ ..+..+.+.+++++++||++++.      |++|+.+.++|++.+-.
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            3455568899999999999999999766 77899999999999999999999      59999999999999854

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.35  E-value=0.0035  Score=51.33  Aligned_cols=130  Identities=13%  Similarity=0.079  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHH
Q 016580           20 YLAIISLQFGYAGMYIITMVSLKHGMS-HYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQN   98 (387)
Q Consensus        20 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   98 (387)
                      +++++++-.+-+.+..+.... .+..+ |+..+++.+..+.+++..+....+++.....+... ++...-|+++ +....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p-~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVP-WWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC-hHHhccHHHH-HHHHH
Confidence            456666777777777777666 45565 99999999999999998888776654333322222 3344467777 88999


Q ss_pred             HHHHhhhccCchhHHHhhchhHHH-HHHHHHH----HhccccceeeccccchhhHHHHHhhhhhh
Q 016580           99 LYYLGMKYTTATFASATVNILPAV-TFILAII----FRLETVNVRRLQSLAKVIGTAVTVAGAMV  158 (387)
Q Consensus        99 ~~~~al~~~~~~~~~~l~~~~pi~-~~~la~~----~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l  158 (387)
                      +..+.....+++.+..+.-+.=++ ..++..+    ..+++++..      |++|+.+.++|+++
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            999999999999988775554444 4444442    245777776      69999999999864

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.33  E-value=0.0023  Score=52.48  Aligned_cols=139  Identities=14%  Similarity=0.047  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhh
Q 016580          190 FTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSG  269 (387)
Q Consensus       190 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  269 (387)
                      ....+..++++++-.+..-...++.+..++|+...++.+..|++.+..+.++.+. ...+.......|+..+ -|++ ++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~-GG~l-Ga   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWI-GGLL-GA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHH-ccch-hh
Confidence            4567888999999999999999998887789999999999999999888877433 2223222222343332 2333 33


Q ss_pred             HHHHHHHHHHhcCCce-eEeecchhHHHHHHHHHHHHhh----cccchhhhhhHHHHHhhhhheeec
Q 016580          270 IAYYVQGFVSKQKGPV-FVTSFSPLCMIITSALGVIILA----ELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       270 ~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~~~~~----e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      .-...-.....+.+++ ++.....-+.+.+++++.+=+.    .+++...++|.+++++|+++..++
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            3233334445555544 4445555666677777665433    458999999999999996665443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.33  E-value=0.00056  Score=61.79  Aligned_cols=79  Identities=19%  Similarity=0.193  Sum_probs=70.9

Q ss_pred             hHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCC
Q 016580          256 RLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD  335 (387)
Q Consensus       256 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~  335 (387)
                      +.+....-+++ ..+.+.+.+.++++.+|+...++..+.++++.++++++++.+++..||++..+.++|+.+........
T Consensus        16 ~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            45566666665 78889999999999999999999999999999999999999999999999999999999988776554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.24  E-value=0.0013  Score=50.92  Aligned_cols=65  Identities=20%  Similarity=0.180  Sum_probs=58.1

Q ss_pred             HhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           90 FLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      ++.+..++.++..++++.|.+.+..+ .....+.+.+++++++||++++.      |++++.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            55558899999999999999988655 77999999999999999999999      5999999999999874

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.22  E-value=0.0025  Score=49.63  Aligned_cols=63  Identities=14%  Similarity=0.180  Sum_probs=53.5

Q ss_pred             hhhHHHHHHHHHHhcCCceeE-eecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          267 CSGIAYYVQGFVSKQKGPVFV-TSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                      +..+++++...++|+.|...+ ++-.....+.+.+.++++++|++++.+++|.++|+.|++...
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            357889999999999887643 444457778889999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.21  E-value=0.0021  Score=49.74  Aligned_cols=64  Identities=14%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             hhhHHHHHHHHHHhcCCceeE-eecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          267 CSGIAYYVQGFVSKQKGPVFV-TSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                      +..+++++...++|+.|...+ ++-.-+..+.+.+.++++++|++++.+++|.++++.|++....
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            468889999999999887644 4444578888999999999999999999999999999998754

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.19  E-value=0.0011  Score=51.84  Aligned_cols=110  Identities=13%  Similarity=0.166  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHHHHHHh
Q 016580           24 ISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQNLYYLG  103 (387)
Q Consensus        24 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  103 (387)
                      ++..++||...++.|.. .++.++..-.. +..-....     ..        .+++     .......+-.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g-~~~~~~~~~~~-~~~~~~~~-----Ll--------~n~~-----y~ipf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRG-SSGLEKVKASL-QLLQEIKF-----LL--------LNPK-----YIIPFLLNQSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHH-HhhcCCccchH-HHHHHHHH-----HH--------HhHH-----HHHHHHHHHHHHHHHHHH
Confidence            34578999999999999 46555444331 21111111     00        1122     222444457888999999


Q ss_pred             hhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhh
Q 016580          104 MKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVM  159 (387)
Q Consensus       104 l~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~  159 (387)
                      +...+.+.+.++ +++.=++|++.++++.+|..+++      .++|+.+.++|+.+.
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            999999999988 58888889999987777776766      599999999998764

Many members are annotated as potential transmembrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.13  E-value=0.0022  Score=49.23  Aligned_cols=65  Identities=22%  Similarity=0.390  Sum_probs=54.4

Q ss_pred             hhHHHHHHHHHHhcCCcee-EeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          268 SGIAYYVQGFVSKQKGPVF-VTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       268 ~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      ..++|.+...++|+.+... .++-.-...+.+.+.++++|+|++++.+++|.++++.|++...+..
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            5778888899999988653 3455567788899999999999999999999999999999876543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.07  E-value=0.01  Score=53.58  Aligned_cols=187  Identities=11%  Similarity=0.057  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHHHH
Q 016580           19 PYLAIISLQFGYAGMYIITMVSLKHGMSHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLDQN   98 (387)
Q Consensus        19 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   98 (387)
                      |++.++++++++|++++-.|..  +.-|++.+-++......+.-+.+..+.  . .+    +.+++.++-|.+- +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~--~-~p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLIL--G-FP----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhc--C-CC----cceeHHHhhhhhh-hcCce
Confidence            5788999999999999999998  566888777777666666555554442  1 12    2344556666666 88999


Q ss_pred             HHHHhhhccCchhHHHhhchhHH-HHHHHHHH-HhccccceeeccccchhhHHHHHhhhhhhhhhccCccc----cccCC
Q 016580           99 LYYLGMKYTTATFASATVNILPA-VTFILAII-FRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYKGPII----NFTSG  172 (387)
Q Consensus        99 ~~~~al~~~~~~~~~~l~~~~pi-~~~~la~~-~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~~~~~----~~~~~  172 (387)
                      +-.-.++....+....+-++.-+ ..-..+++ +++++.... .....-++|++++++|..+...-+.+..    ....+
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            99999999999999988666444 44444443 454433322 1223457888888888777755332220    00000


Q ss_pred             CCCCC------CC---CCCCC------CCCchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016580          173 GAGSH------HG---SSVDS------SDSHFFTGTLMLIGSCFGWAGFFILQSFTLKK  216 (387)
Q Consensus       173 ~~~~~------~~---~~~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~  216 (387)
                      ..+.+      ++   ..+.+      .......|+.+++++++.|+...+=.....++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence            00000      00   00001      11135689999999999999888777766555

The region concerned is approximately 280 residues long.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.02  E-value=0.024  Score=53.50  Aligned_cols=146  Identities=14%  Similarity=0.065  Sum_probs=93.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHH-------HHHHHHhhCCCChHHHHHHHHH---HHHHH-HHHHHHHhh-h-cCC-----C
Q 016580           14 LSKFKPYLAIISLQFGYAGMY-------IITMVSLKHGMSHYVLAVYRHV---VATIV-LAPFAFVLE-R-KIR-----P   75 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~-------~~~k~~~~~~~~p~~~~~~r~~---~~~l~-l~~~~~~~~-~-~~~-----~   75 (387)
                      .+..||++.++++.+..+..+       +..+.+...+.++.....-.+.   ++..+ -..++.+.. + +..     +
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            455789999999999999999       6666643346666655554444   33332 233333321 1 221     1


Q ss_pred             CCC----HHHHHHHHHHHHhHHHHHHHHHHHhhhccCchhHHH---hh-chhHHHHHHHHHHHhccccceeeccccchhh
Q 016580           76 KLT----LPVFLRIMALGFLEPVLDQNLYYLGMKYTTATFASA---TV-NILPAVTFILAIIFRLETVNVRRLQSLAKVI  147 (387)
Q Consensus        76 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~  147 (387)
                      +.+    .+......+.|++- ..++.++..+-...+.+...+   +. ++..++..+.+. ++||+=+..++.-+.-++
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~  327 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSL  327 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHH
Confidence            112    23333335555555 888888888888886655544   65 666677777776 599998855556666788


Q ss_pred             HHHHHhhhhhhhhh
Q 016580          148 GTAVTVAGAMVMTL  161 (387)
Q Consensus       148 g~~~~~~Gv~l~~~  161 (387)
                      |+++.++|.+++..
T Consensus       328 G~vliI~g~~lig~  341 (345)
T PRK13499        328 GCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHhh
Confidence            88899999888864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.01  E-value=0.0017  Score=60.46  Aligned_cols=138  Identities=15%  Similarity=0.179  Sum_probs=111.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHh---hCCCChHHHHHHHHHHHHHHHH-HHHHHhhhcCC---C--CCCHHHHHHHH
Q 016580           16 KFKPYLAIISLQFGYAGMYIITMVSL---KHGMSHYVLAVYRHVVATIVLA-PFAFVLERKIR---P--KLTLPVFLRIM   86 (387)
Q Consensus        16 ~~~~~l~~l~~~~~~~~~~~~~k~~~---~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~~   86 (387)
                      ...|...++++.+..+...++.|..+   .+.++++.+..+..-++..+++ |+.........   .  ..+...+ ...
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~-~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL-ILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH-HHH
Confidence            45799999999999999999999997   2369999999999999999998 87766444332   1  2233333 333


Q ss_pred             HHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           87 ALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        87 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      ...++. .+.|..-|..+.++++-..++....--+++.+.+++++++++++.+      .+|..++++|+.+-..
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHH
Confidence            444555 7788889999999999999999888888889999999999999994      9999999999998653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.93  E-value=0.0041  Score=47.24  Aligned_cols=55  Identities=22%  Similarity=0.352  Sum_probs=34.2

Q ss_pred             hhhHHHHHHHHHHhcCCceeEee-cchhHHHHHHHHHHHHhhcccchhhhhhHHHH
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTS-FSPLCMIITSALGVIILAELVHLGSILGAILI  321 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li  321 (387)
                      +..++++++..++|+.+...+=. ...+..+...+.+++++||++|+.+++|.++|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            46888999999999999887744 44588999999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.92  E-value=0.00051  Score=60.30  Aligned_cols=132  Identities=17%  Similarity=0.140  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHH
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIA  271 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  271 (387)
                      .++.++.-++.|+..-....+...   .|...+.-..+-+.++.+.+.++ .. +.    .....+..-+..|++ -.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~-~~-p~----~T~~~~iv~~isG~~-Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLF-VS-PE----LTLTIFIVGFISGAF-WSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHhee-ec-Cc----cchhhHHHHHHhhhH-hhhh
Confidence            567888899999987766544332   35665544444455544444433 11 11    122345555556665 7889


Q ss_pred             HHHHHHHHhcCCceeEeecch-hHHHHHHHHHHHHhhcccchhhh----hhHHHHHhhhhheeeccC
Q 016580          272 YYVQGFVSKQKGPVFVTSFSP-LCMIITSALGVIILAELVHLGSI----LGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       272 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~t~~~~----~G~~li~~g~~l~~~~~~  333 (387)
                      +..++++++..+.+.+.+++. ++-+-+.+++++.|||..+..++    +..++++.|+.+-.+.++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            999999999999999999887 77888899999999999988863    566788888887665544

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.92  E-value=0.0067  Score=56.63  Aligned_cols=145  Identities=10%  Similarity=0.116  Sum_probs=113.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC---CCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCCHHHHHHHH
Q 016580           13 ALSKFKPYLAIISLQFGYAGMYIITMVSLKH---GMSHYVLAVYRHVVATIVLAPFAFVLERKIRP---KLTLPVFLRIM   86 (387)
Q Consensus        13 ~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~~   86 (387)
                      ..+...|.++++++++++|...++.|.-..+   ..+--.+-.+-.++..++++|..+....-.++   -.+..+....+
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence            3456789999999999999999999997532   24555555666777888888766554432222   12334455567


Q ss_pred             HHHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhcc
Q 016580           87 ALGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYK  163 (387)
Q Consensus        87 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~  163 (387)
                      ..+.++.+++.++|..|.-.+++-.+++-..++....++.-.++.+.++++.      .++|.+..++|-+++...+
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheeccc
Confidence            7888888999999999999999999998888888888888888888999988      5999999999998887544

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.62  E-value=0.0054  Score=46.56  Aligned_cols=57  Identities=16%  Similarity=0.159  Sum_probs=35.4

Q ss_pred             HHhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHH
Q 016580           89 GFLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAV  151 (387)
Q Consensus        89 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~  151 (387)
                      .+..++.+..++..++++.|.+.+..+ ..+..+.+.+++.+++||+++..      |++|+.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            444568899999999999999999655 67999999999999999999999      5988875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.56  E-value=0.11  Score=48.53  Aligned_cols=143  Identities=14%  Similarity=0.078  Sum_probs=100.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccCC---CchHHHHHHHHHHHHHHHHHHHHhccC--------cccccccchhhHHH
Q 016580          191 TGTLMLIGSCFGWAGFFILQSFTLKKYP---AELSLSTLICLMGVVEGAAVSLIMERD--------MSAWKIGFDSRLLA  259 (387)
Q Consensus       191 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~  259 (387)
                      .-.+..+...+.++......|...++.+   .|.+..+..-+.-.+++....+..+..        ...+-+..+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            5556666667777777777777665532   255656666666666666655544211        00111111113334


Q ss_pred             HHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          260 AAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       260 ~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      +..-+++ .++-+.+++.++.+.+|++..+...+.++.+.++..++++++++..||...++...|+.++++....
T Consensus        95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            4444444 6777778999999999999999999999999999999999999999999999999999999844433

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.53  E-value=0.0055  Score=55.27  Aligned_cols=133  Identities=14%  Similarity=0.069  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHH
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIA  271 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  271 (387)
                      |.+..+.|+++++-+.+=.|+.-..  |++...+++.....+....+.++.+.  ..+  .+     ....-|.+ -+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f--~p-----~amlgG~l-W~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPF--YP-----WAMLGGAL-WATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccc--ee-----HHHhhhhh-hhcC
Confidence            5677888999999888877765433  35666665555555555544443322  111  01     11112222 4445


Q ss_pred             HHHHHHHHhcCCceeEeec-chhHHHHHHHHHHH-Hhhcc-----cchhhhhhHHHHHhhhhheeeccCCCC
Q 016580          272 YYVQGFVSKQKGPVFVTSF-SPLCMIITSALGVI-ILAEL-----VHLGSILGAILIVFGLYTVVWGKSKDP  336 (387)
Q Consensus       272 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~-~~~e~-----~t~~~~~G~~li~~g~~l~~~~~~~~~  336 (387)
                      ..+-.-.++..+-...-.+ ...+.+.+...+-+ +||+.     -++..++|.+++++|..++..-|.+.+
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            5555555666555433322 23355566665544 45543     345689999999999998887666553

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.06  E-value=0.022  Score=44.53  Aligned_cols=109  Identities=11%  Similarity=0.024  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHH
Q 016580          198 GSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGF  277 (387)
Q Consensus       198 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  277 (387)
                      +-++.|+..+-+.||-.+..++...- . +..-.. ..    ++     ..        |-..+  .......+...|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~-~~----Ll-----~n--------~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEI-KF----LL-----LN--------PKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHH-HH----HH-----Hh--------HHHHH--HHHHHHHHHHHHHH
Confidence            44688999999999988876532221 1 111111 11    00     01        11111  22235556778889


Q ss_pred             HHhcCCceeEeecc-hhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhe
Q 016580          278 VSKQKGPVFVTSFS-PLCMIITSALGVIILAELVHLGSILGAILIVFGLYTV  328 (387)
Q Consensus       278 a~~~~~~~~~s~~~-~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~  328 (387)
                      .+.+.+.+.+.++. .+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999985 8999999999988777778888999999999998764

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=95.92  E-value=0.038  Score=49.16  Aligned_cols=59  Identities=8%  Similarity=0.017  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhh
Q 016580           94 VLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMV  158 (387)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l  158 (387)
                      .....+....+++.+....++...+.++++.+++.++++|+++..      +++|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence            777888999999999999999999999999999999999999999      59999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.64  E-value=0.21  Score=41.09  Aligned_cols=137  Identities=12%  Similarity=0.024  Sum_probs=79.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGM-SHYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVLD   96 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   96 (387)
                      ..++..+++-.+-.....+.-.. .+.. +|+.-.+..+.++..++..+.+...++......++.-++.+.-|+++ +.+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL-~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRL-ARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            45556666666666666555555 3444 59999999999999999888877433322221122233445555555 666


Q ss_pred             HHHHHHhhhccCchhHHHh-hchhHHHHHHHHHH-HhccccceeeccccchhhHHHHHhhhhhhh
Q 016580           97 QNLYYLGMKYTTATFASAT-VNILPAVTFILAII-FRLETVNVRRLQSLAKVIGTAVTVAGAMVM  159 (387)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~-~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~  159 (387)
                      -..-........++....+ ..-+-+...++-.+ +++++   +++.+..+++|+++.++|++++
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence            5555566666666666544 33333334443322 12211   1233444799999999995554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.60  E-value=0.011  Score=54.22  Aligned_cols=128  Identities=25%  Similarity=0.263  Sum_probs=94.7

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh-ccCcccccccchhhHHHHHHhh
Q 016580          186 DSHFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIM-ERDMSAWKIGFDSRLLAAAYSG  264 (387)
Q Consensus       186 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g  264 (387)
                      ..++..|.++++.+.+..+...++.|+..++...    .              ..-. +......   ....|    +.|
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg~~yl---~~~~W----w~G   70 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGGYGYL---KEPLW----WAG   70 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCCcchh---hhHHH----HHH
Confidence            3556789999999999999999888887766331    0              0000 1111111   11122    346


Q ss_pred             hhhhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCCCCC
Q 016580          265 VVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKDPPS  338 (387)
Q Consensus       265 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~~~~  338 (387)
                      ++...++-.+.+.+....+++.++++..++.+.+.+++..+++|+++....+|+++.++|..++.....++++.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            66677788888888899999999999999999999999999999999999999999999977776655444333

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.39  E-value=0.49  Score=43.33  Aligned_cols=140  Identities=11%  Similarity=0.075  Sum_probs=110.9

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHH
Q 016580           14 LSKFKPYLAIISLQFGYAGMYIITMVSLK-HGMSHYVLAVYRHVVATIVLAPFAFVLERKIRP-----KLTLPVFLRIMA   87 (387)
Q Consensus        14 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~   87 (387)
                      .+...|+++++...++=|.........+. ..++++.+.+.-.++.++.-....... ...++     +..++.++-++.
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHH
Confidence            35567888888888888888888777763 368899999988888887776664332 22222     234566777888


Q ss_pred             HHHhHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           88 LGFLEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        88 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      .+.++ .+++.+.++-++.-++-.-+.+..+--++..+++.+.++.+++..      ||+|+.+.+.|+.+=.+
T Consensus       247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence            88898 899999999999988877788888889999999999999999999      59999999999887654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=93.27  E-value=1.2  Score=41.01  Aligned_cols=126  Identities=11%  Similarity=0.118  Sum_probs=86.1

Q ss_pred             HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhcc-Ccc-cccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCce
Q 016580          208 ILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIMER-DMS-AWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPV  285 (387)
Q Consensus       208 v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~  285 (387)
                      .+.++..++++-|+-.+.+++.+-.......-...+. .+. .-...+....-.+.-.++ ++++-..+-++++++++.+
T Consensus        33 f~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlS  111 (349)
T KOG1443|consen   33 FYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLS  111 (349)
T ss_pred             HHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeee
Confidence            3344444445546777777766555444443333322 111 111112222233344555 4777778889999999999


Q ss_pred             eEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCC
Q 016580          286 FVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       286 ~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      ..++.....+++..+++.++-=|++++.-.+=..+|-.|+++.+++..+
T Consensus       112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq  160 (349)
T KOG1443|consen  112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ  160 (349)
T ss_pred             eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence            9999999999999999999989999999999999999999998876543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.08  E-value=0.06  Score=45.89  Aligned_cols=66  Identities=18%  Similarity=0.149  Sum_probs=60.7

Q ss_pred             hhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          268 SGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       268 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      ...+.+.|..++++.+|+.++.+...+-.+..+++|++++++.....++..++.+.|++.+.+...
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            345788999999999999999999999999999999999999999999999999999999887554

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.06  E-value=0.24  Score=46.22  Aligned_cols=144  Identities=15%  Similarity=0.094  Sum_probs=89.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhc--cC-cccccccchhhHHHHHHhh
Q 016580          188 HFFTGTLMLIGSCFGWAGFFILQSFTLKKYPAELSLSTLICLMGVVEGAAVSLIME--RD-MSAWKIGFDSRLLAAAYSG  264 (387)
Q Consensus       188 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~g  264 (387)
                      .-..|+++..+++++-+.+.+-.||. |+.+  .+.......+-..+..|.....-  ++ .......+...+......|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            45789999999999999999888875 4433  33333333333334444332221  11 1122222334566666677


Q ss_pred             hhhhhHHHHHHHHHHhcCCceeE-eecchhHHHHHHHHHHHHhhc-------ccchhhhhhHHHHHhhhhheeeccCCC
Q 016580          265 VVCSGIAYYVQGFVSKQKGPVFV-TSFSPLCMIITSALGVIILAE-------LVHLGSILGAILIVFGLYTVVWGKSKD  335 (387)
Q Consensus       265 ~~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e-------~~t~~~~~G~~li~~g~~l~~~~~~~~  335 (387)
                      ++ -.++-..|-.++||.+.+.. ++..-+.-+++.++--++.++       +-....++|.++.++|+.+..+.-..+
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K  158 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK  158 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence            76 78888999999999987643 333345556666665554332       223357899999999999988764443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.90  E-value=1.3  Score=41.02  Aligned_cols=133  Identities=13%  Similarity=0.150  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH--HHHHHHHHHHHHHHHHHhccCcccccccchhhHHH--HHHhhhhh
Q 016580          192 GTLMLIGSCFGWAGFFILQSFTLKKYPAELSLS--TLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLA--AAYSGVVC  267 (387)
Q Consensus       192 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~  267 (387)
                      ....++.-+++-.+..+..|.....++-|....  .+|.+.+.+.........--+.++.+.....-|..  +++.+   
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~---   89 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVG---   89 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHH---
Confidence            344444444555556666777777666444444  48888777666655533222222222222223332  22222   


Q ss_pred             hhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheee
Q 016580          268 SGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVW  330 (387)
Q Consensus       268 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~  330 (387)
                         ..+.-.+++++.+.....++....|+++.+...++++.+++...+....++++|......
T Consensus        90 ---~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   90 ---MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             ---HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence               223335678999999999999999999999999999999999999999999999776653

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.59  E-value=0.67  Score=40.53  Aligned_cols=137  Identities=14%  Similarity=0.184  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh-CCCChHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHhH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLK-HGMSHYVLAVYRHVVATIVLAPFAFVLERKIRP----KLTLPVFLRIMALGFLE   92 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~   92 (387)
                      .|++.+...++.-+..-...|...+ ....-++..++..+.+..+++.+....+.+...    .++.....+..+.|++.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            4677777777776666666666531 346678889999999999999887776543322    23444555667777777


Q ss_pred             HHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           93 PVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                       +.-.+|--+.++-++.+..+++..+.-.-.++-+.++++|+.+..      ++.++.+++...++-..
T Consensus       235 -vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav  296 (309)
T COG5070         235 -VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV  296 (309)
T ss_pred             -hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence             666777888899999999999999998889999999999999998      59999998886655544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.42  E-value=0.4  Score=42.19  Aligned_cols=134  Identities=12%  Similarity=0.056  Sum_probs=91.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----CCCHHHHHHHHHHHH
Q 016580           18 KPYLAIISLQFGYAGMYIITMVSLKHGM--SHYVLAVYRHVVATIVLAPFAFVLERKIRP-----KLTLPVFLRIMALGF   90 (387)
Q Consensus        18 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~   90 (387)
                      .|-++++++...=|......... ..+.  +.-.+.+...+-+.+.+..-+... ...|.     ...+..++-+...++
T Consensus       172 ~GElLL~lSL~mDGlTg~~Qdri-ra~yq~~g~~MM~~~NlwStL~Lg~g~lfT-GElweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  172 FGELLLILSLAMDGLTGSIQDRI-RASYQRTGTSMMFYTNLWSTLYLGAGLLFT-GELWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             hHHHHHHHHHHhcccchhHHHHH-HHhhccCchhhHHHHHHHHHHHhhhhheeh-hhHHHHHHHHHhccHHHHHHHHHHH
Confidence            56666777766666666665554 2222  223333444444444433222111 11110     001255666778888


Q ss_pred             hHHHHHHHHHHHhhhccCchhHHHhhchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           91 LEPVLDQNLYYLGMKYTTATFASATVNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      .+ ++++.+.+.-..+-+|-..+++..+--+|+.+.++++++.+++.+      ||+|..+.+.|...=.
T Consensus       250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV  312 (337)
T ss_pred             HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence            88 999999999999999999999999999999999999999999999      5999999999876653

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.57  E-value=0.5  Score=42.78  Aligned_cols=65  Identities=12%  Similarity=0.105  Sum_probs=59.1

Q ss_pred             hhhHHHHHHHHHHhcCCceeEeecchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeec
Q 016580          267 CSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWG  331 (387)
Q Consensus       267 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~  331 (387)
                      +-..+..+++.++..++++.-.++.-...+++-+++..+++.+++..||+|+..+.+|+..+...
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            36667788889999999999999999999999999999999999999999999999999887755

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=86.71  E-value=1.1  Score=34.13  Aligned_cols=111  Identities=14%  Similarity=0.209  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHhHHHH
Q 016580           22 AIISLQFGYAGMYIITMVSLKHGMS------HYVLAVYRHVVATIVLAPFAFVLERKIRPKLTLPVFLRIMALGFLEPVL   95 (387)
Q Consensus        22 ~~l~~~~~~~~~~~~~k~~~~~~~~------p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   95 (387)
                      -+++..++||...++.|.. +.+++      .-...++|-....                .++|+.+...    .++ --
T Consensus         7 ~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iPF----llN-qc   64 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIPF----LLN-QC   64 (125)
T ss_pred             HHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHHH----HHH-Hh
Confidence            3566788999999999997 44432      2222222221111                1123322221    222 44


Q ss_pred             HHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhh
Q 016580           96 DQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMT  160 (387)
Q Consensus        96 ~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~  160 (387)
                      +..+||.-+.+++.+.+..+ +++.-.|+.+++..+ +|+...+.     -+.|..+.++|+.+.+
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence            56778899999999998877 666777888888654 66555443     5889999999987753

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=85.69  E-value=0.31  Score=43.43  Aligned_cols=111  Identities=14%  Similarity=0.075  Sum_probs=82.1

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchhHHH
Q 016580          217 YPAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMI  296 (387)
Q Consensus       217 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv  296 (387)
                      .+.|...++.....-+++-.++.++...   ..    ...|..-+.++++ -+=++++...|.++++-+.+..+..-..+
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~~---~~----~~~~~hYilla~~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip  116 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFRRK---YI----KAKWRHYILLAFV-DVEANYFVVKAYQYTSMTSIMLLDCWAIP  116 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhhhH---HH----HHHHHHhhheeEE-eecccEEEeeehhhcchHHHHHHHHhhhH
Confidence            3446766666666555555555543321   11    1234445555664 67778788889999999999999999999


Q ss_pred             HHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccCCC
Q 016580          297 ITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD  335 (387)
Q Consensus       297 ~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~~~  335 (387)
                      ...+++|++++.+..+.++.|.++.+.|+.++....-..
T Consensus       117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a  155 (336)
T KOG2766|consen  117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA  155 (336)
T ss_pred             HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence            999999999999999999999999999999888665443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.41  E-value=1.7  Score=39.38  Aligned_cols=111  Identities=16%  Similarity=0.096  Sum_probs=77.5

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhccCcccccccch----hhHHHHHHhhhhhhhHHHHHHHHHHhcCCceeEeecchh
Q 016580          218 PAELSLSTLICLMGVVEGAAVSLIMERDMSAWKIGFD----SRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPL  293 (387)
Q Consensus       218 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  293 (387)
                      +.|.-.+.++.++...+...........+..+..+..    ....-++=+.++ -.......+.++++++.+-.-+-..+
T Consensus        59 d~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   59 DAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceehhhcceEEEEeccch
Confidence            4588889999999988887776554332211111110    111111112221 23344566888999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          294 CMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       294 ~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                      ..++++++++++++++-+..-..++.+|++|..+-.
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv  173 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV  173 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheecc
Confidence            999999999999999999999999999999877643

>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed

Probab=84.21  E-value=45  Score=33.14  Aligned_cols=25  Identities=4%  Similarity=0.204  Sum_probs=19.9

Q ss_pred             cchhhhhhHHHHHhhhhheeeccCC
Q 016580          310 VHLGSILGAILIVFGLYTVVWGKSK  334 (387)
Q Consensus       310 ~t~~~~~G~~li~~g~~l~~~~~~~  334 (387)
                      ++..|++.+.++++|++++.+.+++
T Consensus       254 l~~~Q~lSl~~il~gl~~~~~~~~~  278 (460)
T PRK13108        254 IRINSFTSTFVFIGAVVYIILAPKG  278 (460)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence            6888999999999998877654433

>PRK02237 hypothetical protein; Provisional

Probab=82.75  E-value=2.1  Score=32.96  Aligned_cols=44  Identities=7%  Similarity=0.093  Sum_probs=36.5

Q ss_pred             cchhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          290 FSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       290 ~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      +.-.-++.++++++.+-+++|+...++|.++.+.|+.++.+..+
T Consensus        65 YGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         65 YGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             hhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            34445577889999999999999999999999999987766543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=82.71  E-value=1.9  Score=33.02  Aligned_cols=41  Identities=10%  Similarity=0.206  Sum_probs=35.6

Q ss_pred             hHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeeccC
Q 016580          293 LCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKS  333 (387)
Q Consensus       293 ~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~~  333 (387)
                      .-++.+.++++.+-+++|+...++|.++.+.|+.++.+..|
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            34567889999999999999999999999999998877654

; GO: 0016020 membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=82.55  E-value=3.7  Score=31.39  Aligned_cols=59  Identities=19%  Similarity=0.228  Sum_probs=44.9

Q ss_pred             HHHHHHHHHhcCCceeEeecch-hHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhhee
Q 016580          271 AYYVQGFVSKQKGPVFVTSFSP-LCMIITSALGVIILAELVHLGSILGAILIVFGLYTVV  329 (387)
Q Consensus       271 ~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~  329 (387)
                      +..+|+..+.+.+.+.+..+.+ +...++.+.+..+-.|......++|..++++|+.+..
T Consensus        65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            4445666788888877776654 6888889999775555577779999999999998764

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=81.98  E-value=62  Score=32.84  Aligned_cols=30  Identities=13%  Similarity=-0.043  Sum_probs=13.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016580          188 HFFTGTLMLIGSCFGWAGFFILQSFTLKKYP  218 (387)
Q Consensus       188 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  218 (387)
                      ....|.+....+.-.-.. .+...++.++.+
T Consensus       253 a~~yGll~a~~gvGai~G-al~~~~l~~~~~  282 (524)
T PF05977_consen  253 ASGYGLLLAAFGVGAILG-ALLLPRLRRRLS  282 (524)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHhhcccC
Confidence            345566655443333322 333344445544

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	387
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.92
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.64
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.57
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.55

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.92  E-value=5.2e-10  Score=90.08  Aligned_cols=71  Identities=14%  Similarity=0.235  Sum_probs=54.0

Q ss_pred             HhhhhhhhHHHHHHHHHHhcCCceeEeec-chhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          262 YSGVVCSGIAYYVQGFVSKQKGPVFVTSF-SPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       262 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      .+++++++++++++++++++.+++.+..+ ..+.|+++.++++++++|++++.+++|+++|++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35666789999999999999999999999 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.64  E-value=3e-07  Score=71.24  Aligned_cols=69  Identities=16%  Similarity=0.164  Sum_probs=63.5

Q ss_pred             HHHHhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhh
Q 016580           87 ALGFLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTL  161 (387)
Q Consensus        87 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~  161 (387)
                      +.+++.+++++.++.+++++.|.+.+..+ ..+.|+++.+++++++||+++..      |++|+.+.++|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45666678999999999999999999888 89999999999999999999999      59999999999999864

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.57  E-value=1.1e-07  Score=76.47  Aligned_cols=71  Identities=15%  Similarity=0.160  Sum_probs=53.7

Q ss_pred             HHHHhHHHHHHHHHHHhhhccCchhHHHh-hchhHHHHHHHHHHHhccccceeeccccchhhHHHHHhhhhhhhhhcc
Q 016580           87 ALGFLEPVLDQNLYYLGMKYTTATFASAT-VNILPAVTFILAIIFRLETVNVRRLQSLAKVIGTAVTVAGAMVMTLYK  163 (387)
Q Consensus        87 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~~la~~~l~e~~~~~~~~~~~~~~g~~~~~~Gv~l~~~~~  163 (387)
                      +.+++.+++++.++.+++++.|++.+..+ .++.|+++.++++++++|+++..      |++|+.+.++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcCC
Confidence            56677779999999999999999999988 89999999999999999999999      5999999999999997543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.55  E-value=1.1e-07  Score=73.74  Aligned_cols=70  Identities=14%  Similarity=0.243  Sum_probs=63.8

Q ss_pred             hhhhhhhHHHHHHHHHHhcCCceeEeec-chhHHHHHHHHHHHHhhcccchhhhhhHHHHHhhhhheeecc
Q 016580          263 SGVVCSGIAYYVQGFVSKQKGPVFVTSF-SPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGK  332 (387)
Q Consensus       263 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li~~g~~l~~~~~  332 (387)
                      .++++.+++++++.+++|+.+.+.+..+ ..+.|+++.++++++++|++|+.+++|.++|+.|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4555678899999999999999999888 899999999999999999999999999999999999886543

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00