Citrus Sinensis ID: 016648

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-----
Protein Sequence
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHccccEEEEEEcccEEEcccccccccccccccccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHccccEEEEccccHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHcccccccEEEccccccccccccccccHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccEEEEEccccHHHHHHHHHccEEccccccccHHHHHHHHHHHcccEEEccccccccccccccccccEEEcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHccccEEEEEEcccEEEcccccccccccccccccccHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccHHHEEEccccccHHHcccccccHHHHHHHccccccccEEEEEccccHHHcHHHHHHHHHHccccEEEEEccccHHHHHHHHcccccEEEEEcccHHHHHHHHHcccEEEEccccHHHHHHHHHHHHccccEEEEccccccHccccccccccEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHhiysfpcpwyqkvplslalspriisevarfkpdiihasspgIMVFGALIIAKLLCVPivmsyhthvpvyiprytfswlvKPMWLVIKFLHRaadltlvpsvaIGKDLEAARVTAANKIRIwkkgvdsesfhprfrssemrwrlsngepdkplivhVGRLGVEKSLDFLKRVMDRLPEARiafigdgpyrEELEKMFTGMPAVFTGMLLGEELSQayasgdvfvmpseseTLGLVVLEAMssgipvvgvraggipdiipedqdgkigylfnpgdlddclskleplLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAkrifpsaevnys
Flexible Loop (DISEMBL)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAankiriwkkgvdsesfhprfrssemrwrlsngepdkplivhvgrlgveKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWlakrifpsaevnys
Low Complexity Region (SEG)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered region (IsUnstruct)
*VHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD***********************KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE*********MEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFP*******
Disordered Region (DISOPRED)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA*******************************
Disordered Region (DISEMBL)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered Region (DISPRO)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEV***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVHLCLCTFLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	385	2.2.26 [Sep-21-2011]
O06423	378	GDP-mannose-dependent alp	yes	no	0.758	0.772	0.351	2e-35
Q8NT41	413	GDP-mannose-dependent alp	yes	no	0.748	0.697	0.344	3e-35
A0QRG8	375	GDP-mannose-dependent alp	yes	no	0.761	0.781	0.333	2e-29
A0R043	382	GDP-mannose-dependent alp	no	no	0.483	0.486	0.341	5e-20
P0CF99	381	GDP-mannose-dependent alp	no	no	0.384	0.388	0.371	5e-19
A5U3B9	381	GDP-mannose-dependent alp	no	no	0.384	0.388	0.371	5e-19
Q59002	390	Uncharacterized glycosylt	yes	no	0.522	0.515	0.308	2e-17
Q65CC7	386	Glycosyltransferase KanE	N/A	no	0.696	0.694	0.265	1e-15
Q4JSW2	419	D-inositol 3-phosphate gl	no	no	0.568	0.522	0.289	4e-14
O53522	385	GDP-mannose-dependent alp	no	no	0.446	0.446	0.310	5e-14

>sp|O06423|MGTA_MYCTU GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium tuberculosis GN=mgtA PE=1 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 158/310 (50%), Gaps = 18/310 (5%)

Query: 32  HHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 91
           H + S   P    +PL +  + R++  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct: 62  HRVPSRMFPKVTTLPLGVP-TFRMLRALRGFDPDVVHLASPALLGYGGLHAARRLGVPTV 120

Query: 92  MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 151
             Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +    ++ 
Sbjct: 121 AVYQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIP---RVH 177

Query: 152 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 210
            W +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +       
Sbjct: 178 RWARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GAV 233

Query: 211 RIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 269
           R+  +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV E
Sbjct: 234 RLVIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQE 290

Query: 270 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA 329
           A++SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  A
Sbjct: 291 ALASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL--A 345

Query: 330 ARQEMEKYDW 339
           AR+ +    W
Sbjct: 346 ARRSVLGRSW 355

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).
Mycobacterium tuberculosis (taxid: 1773)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q8NT41|MGTA_CORGL GDP-mannose-dependent alpha-mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=mgtA PE=1 SV=1

 Score =  149 bits (377), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 152/305 (49%), Gaps = 17/305 (5%)

Query: 40  PWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP 99
           P    +P+ + L P + S +  + PDIIH +SP ++   A   A+ L +P +  Y T V 
Sbjct: 72  PLIDSLPIGVPL-PSVTSVLREYNPDIIHLASPFVLGGAAAFAARQLRIPAIAIYQTDVA 130

Query: 100 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS 159
            +  RY  + L    W  IK +H     TL PS      ++  R    N I  W +GVDS
Sbjct: 131 GFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIFHWARGVDS 187

Query: 160 ESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGD 217
           + FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  + ++  +GD
Sbjct: 188 KRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SDIQLVIVGD 243

Query: 218 GPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP 276
           GP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + EA +SG+P
Sbjct: 244 GPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQEAQASGVP 300

Query: 277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
            +G RAGG  D+I E   G  G L +  D  + L      + +      M  AA + ++ 
Sbjct: 301 TIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCAAAWEGVKD 357

Query: 337 YDWRA 341
             W A
Sbjct: 358 KTWEA 362

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A0QRG8|MGTA_MYCS2 GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=mgtA PE=3 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 32  HHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 91
           H + S   P    +PL +   PR+I  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct: 59  HRVPSRMFPKITSLPLGVP-RPRMIGVLRGFDPDVVHLASPALLGYGGLHAARHLGVPSV 117

Query: 92  MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 151
             + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+    ++ 
Sbjct: 118 AVFQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIP---RVH 174

Query: 152 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 210
            W +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  V+    + 
Sbjct: 175 RWGRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLA-VLAARDDL 230

Query: 211 RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA 270
           ++  +GDG  R +L+ +     AVFTG L G  L+ AYAS DVFV P E ET    V EA
Sbjct: 231 QLVIVGDGVDRVKLQTVLP--TAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQEA 288

Query: 271 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 330
           M+SG+PV+   AGG  D++      + G L +    +  L      L  +  R   G AA
Sbjct: 289 MASGVPVIAPDAGGPRDLV---APCRTGLLLDVDGFECALPAAVTHLIAE--RRRYGIAA 343

Query: 331 RQEMEKYDW 339
           R+ +    W
Sbjct: 344 RRSVLARTW 352

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A0R043|PIMB_MYCS2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=pimB PE=1 SV=1

 Score = 99.0 bits (245), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 22/208 (10%)

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLPEAR 211
           GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct: 167 GVDTDRFAPDP-DARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query: 212 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 260
           +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct: 226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query: 261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 320
           E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct: 286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query: 321 ELRETMGQAARQ-EMEKYDWRAATRTIR 347
                MG A R   ++ + WR  TR  R
Sbjct: 343 RRAAAMGVAGRHWALDNWQWR--TRGAR 368

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1) or to the position 6 of a monoacyl phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (AcPIM1) to generate a mononacyl phosphatidyl-myo-inositol dimannoside (AcPIM2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|P0CF99|PIMC_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimC PE=1 SV=1

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 143 RVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK----SLD 198
           R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH GRL VEK    S+D
Sbjct: 163 RIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVHCGRLSVEKHADRSID 219

Query: 199 FLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE-LSQAYASGDVFVMP 257
            L  + D   +AR+   G+GP R  LE+  TG+P  FTG +     ++   AS DV + P
Sbjct: 220 ALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRHAVAGLLASADVALAP 279

Query: 258 SESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 293
              ET GL  LE+++ G P V  R   + +II  D 
Sbjct: 280 GPHETFGLAALESLACGTPAVVSRTSALTEIITADS 315

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|A5U3B9|PIMC_MYCTA GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pimC PE=3 SV=1

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 8/156 (5%)

Query: 143 RVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK----SLD 198
           R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH GRL VEK    S+D
Sbjct: 163 RIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVHCGRLSVEKHADRSID 219

Query: 199 FLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE-LSQAYASGDVFVMP 257
            L  + D   +AR+   G+GP R  LE+  TG+P  FTG +     ++   AS DV + P
Sbjct: 220 ALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRHAVAGLLASADVALAP 279

Query: 258 SESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 293
              ET GL  LE+++ G P V  R   + +II  D 
Sbjct: 280 GPHETFGLAALESLACGTPAVVSRTSALTEIITADS 315

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (taxid: 419947)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1

 Score = 90.9 bits (224), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 13/214 (6%)

Query: 145 TAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKR 202
           T  +K+++   G++   F       E + +R S G + D+ +I+ VGRL  +K +++L R
Sbjct: 169 TPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMILFVGRLTYQKGIEYLIR 228

Query: 203 VMDRLPE---ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFV 255
            M ++ E   A++   G G  R+ LE +   +      VF G + G+ L + Y S DV V
Sbjct: 229 AMPKILERHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSADVVV 288

Query: 256 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 315
           +PS  E  G+V LEAM++G PVV    GG+ +II  + +G   Y  NP   D     ++ 
Sbjct: 289 IPSVYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNP---DSIAWGVDR 345

Query: 316 LLYNQELRETMGQAARQEM-EKYDWRAATRTIRN 348
           +L +   RE +   A++++ EKY W    +   N
Sbjct: 346 VLSDWGFREYIVNNAKKDVYEKYSWDNIAKETVN 379

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q65CC7|KANE_STRKN Glycosyltransferase KanE OS=Streptomyces kanamyceticus GN=kanE PE=1 SV=1

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 22/290 (7%)

Query: 68  HASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI---PRYTFSWLVKPM--WLVIKFLH 122
           H    G   F   +++++L VP+V+  H+    Y+   P   F  +  P+  W     + 
Sbjct: 91  HCDGSGAAAFYPYLMSRILGVPLVVQIHSSR--YLSQHPTTLFERVTDPIAKWAERHAVR 148

Query: 123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS-ESFHPRFRSSEMRWRLSNGEPD 181
           +AA + ++   A  +    A++ A    R+     D  +      R +E+R R   G  D
Sbjct: 149 KAAAVLMLTDRARDEMRRKAQLPAERVHRLAYLASDQFKDADTEARRAELRERY--GLDD 206

Query: 182 KPLIVHVGRLGVEKSLDF----LKRVMDRLPEARIAFIGDGPYREELEKMFTGMP----A 233
           +P++++VGR+  EK +++       +  R  + +    GDGP R +LEK+          
Sbjct: 207 RPIVLYVGRIAAEKGVEYYIEAAAELTRRGRDCQFVIAGDGPARPDLEKLIGARGLRDRV 266

Query: 234 VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 293
             TG +  E +    + G++ V+PS  E LG+V+LE M+   P+V     G+  +I   +
Sbjct: 267 TITGFMSHEFIPSMISLGELVVLPSRYEELGIVILECMTMRRPLVAHDVNGVNKLI---E 323

Query: 294 DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ-AARQEMEKYDWRAA 342
           DG  G +  P    +    +E LL + ELRE M + AA     KY   AA
Sbjct: 324 DGTTGIVVPPFRTPEMADAVERLLDDPELRERMAENAAPLPAAKYSLSAA 373

Glycosyltransferase involved in the biosynthesis of kanamycin by mediating conversion of paromamine to 3''-deamino-3''-hydroxykanamycin C using UDP-D-3-acetylglucosamine as sugar donor. Can also use UDP-alpha-D-glucose as sugar donor but with much lower activity compared to UDP-D-3-acetylglucosamine.

Streptomyces kanamyceticus (taxid: 1967)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q4JSW2|MSHA_CORJK D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium jeikeium (strain K411) GN=mshA PE=3 SV=1

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 19/238 (7%)

Query: 125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL 184
           ADL +V +    +DL          IR+   G D + F P    +  R R   G P +  
Sbjct: 165 ADLLIVNTDQEVQDLIEGYDATTCAIRVVPPGADVDRFTPGSDRATERSRRELGIPFRTK 224

Query: 185 IVH-VGRL----GVEKSLDFLKRVMDRLPEARIAFI----GDGPYREELEKM-------F 228
           ++  VGRL    G +  L  +  ++DR P+ ++A +      G    ELE++        
Sbjct: 225 VIGFVGRLQRLKGPQVLLRAVAELLDRHPQQQLAVVICGGSSGAGGNELERLQLLAEELG 284

Query: 229 TGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 288
                 F      EEL   Y + D+  +PS +E+ GLV LEA + G PVV  R GG+P  
Sbjct: 285 ISRCVRFLAPRPPEELVGVYRAADIVAVPSYNESFGLVALEAQACGTPVVATRTGGLPIA 344

Query: 289 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI 346
           +     GK G L +  D  D    L  L+ + +LR  MG+ A     K+ W+A+   +
Sbjct: 345 V---DGGKSGLLVDGHDPSDWADALGKLVLDDDLRIAMGEYAPSHAAKFSWQASAEAL 399

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium jeikeium (strain K411) (taxid: 306537)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|O53522|PIMB_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimB PE=1 SV=2

 Score = 79.3 bits (194), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 21/193 (10%)

Query: 156 GVDSESFHPR-FRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEA 210
           GVD++ F P     +E+R R   GE  +P +V + RL   K  D L      +  R+  A
Sbjct: 172 GVDTDRFRPDPAARAELRKRYRLGE--RPTVVCLSRLVPRKGQDTLVTALPSIRRRVDGA 229

Query: 211 RIAFIGDGPYREELEKMF----TGMPAVFTGMLLGEELSQAYASGDVFVMPSES------ 260
            +  +G GPY E L K+           FTG +  +EL   +A  DVF MP  +      
Sbjct: 230 ALVIVGGGPYLETLRKLAHDCGVADHVTFTGGVATDELPAHHALADVFAMPCRTRGAGMD 289

Query: 261 -ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 319
            E LG+V LEA ++G+PV+   +GG P+ +   Q  K G + +   +D     +  LL +
Sbjct: 290 VEGLGIVFLEASAAGVPVIAGNSGGAPETV---QHNKTGLVVDGRSVDRVADAVAELLID 346

Query: 320 QELRETMGQAARQ 332
           ++    MG A R+
Sbjct: 347 RDRAVAMGAAGRE 359

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
224090935	433	predicted protein [Populus trichocarpa]	0.898	0.799	0.913	0.0
449439908	515	PREDICTED: GDP-mannose-dependent alpha-m	0.906	0.677	0.896	0.0
255581077	452	glycosyltransferase, putative [Ricinus c	0.888	0.756	0.918	0.0
359481678	519	PREDICTED: GDP-mannose-dependent alpha-m	0.906	0.672	0.871	0.0
297740238	436	unnamed protein product [Vitis vinifera]	0.906	0.800	0.871	0.0
356568054	515	PREDICTED: GDP-mannose-dependent alpha-m	0.909	0.679	0.877	0.0
224140379	429	predicted protein [Populus trichocarpa]	0.901	0.808	0.893	1e-180
356523263	448	PREDICTED: GDP-mannose-dependent alpha-m	0.906	0.779	0.876	1e-180
356496170	523	PREDICTED: GDP-mannose-dependent alpha-m	0.903	0.665	0.885	1e-180
356504282	517	PREDICTED: GDP-mannose-dependent alpha-m	0.898	0.669	0.887	1e-179

>gi|224090935|ref|XP_002309122.1| predicted protein [Populus trichocarpa] gi|222855098|gb|EEE92645.1| predicted protein [Populus trichocarpa]

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/346 (91%), Positives = 331/346 (95%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL IAKLLCVPIVMSYH
Sbjct: 88  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALAIAKLLCVPIVMSYH 147

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMW+++KFLHRAADLTLVPS AIG+DLEAARVTAANKIR+W K
Sbjct: 148 THVPVYIPRYTFSWLVKPMWMILKFLHRAADLTLVPSAAIGRDLEAARVTAANKIRLWNK 207

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPRFRS+EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLKRVMDRLP ARIAFI
Sbjct: 208 GVDSESFHPRFRSNEMRMRLSNGEPEKPLIVHVGRLGVEKSLDFLKRVMDRLPGARIAFI 267

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMFTG+PAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 268 GDGPYREELEKMFTGIPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 327

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVV  RAGGIPDIIP +QDGK G+LFNPGDLDDCLSKLEPLL NQELRETMG+AAR +ME
Sbjct: 328 PVVAARAGGIPDIIPPEQDGKTGFLFNPGDLDDCLSKLEPLLDNQELRETMGKAARHDME 387

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAE 381
           KYDW+AAT+ IRNEQYNAAIWFWRKKRAQLLRPIQWL KR+FPS E
Sbjct: 388 KYDWKAATKKIRNEQYNAAIWFWRKKRAQLLRPIQWLVKRLFPSPE 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439908|ref|XP_004137727.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus] gi|449483456|ref|XP_004156597.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/349 (89%), Positives = 331/349 (94%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCP YQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLL VP+VMSYH
Sbjct: 166 SFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLSVPLVMSYH 225

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS AIGKDLEA RVTAANKIR+W K
Sbjct: 226 THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSAAIGKDLEAERVTAANKIRLWNK 285

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDS SFHPRFRS EMR RLS GEPDKPLIVHVGR+GVEKSLDFLKR+MDRLPEARIA +
Sbjct: 286 GVDSVSFHPRFRSHEMRLRLSGGEPDKPLIVHVGRIGVEKSLDFLKRIMDRLPEARIAIV 345

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEK+FTGMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 346 GDGPYREELEKIFTGMPAVFTGMLSGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 405

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PV+G RAGG+PDIIP +QDGKIGYL+ PGD+DDCLSKL+PLL N+ELRETMG+AAR+EME
Sbjct: 406 PVIGARAGGVPDIIPPEQDGKIGYLYTPGDVDDCLSKLKPLLENRELRETMGKAAREEME 465

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 384
           KYDW+AATRTIRNEQYNAAIWFWRKKRAQ LRP QWL KRIFPS+EV+Y
Sbjct: 466 KYDWKAATRTIRNEQYNAAIWFWRKKRAQFLRPFQWLFKRIFPSSEVSY 514

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581077|ref|XP_002531354.1| glycosyltransferase, putative [Ricinus communis] gi|223529052|gb|EEF31038.1| glycosyltransferase, putative [Ricinus communis]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/344 (91%), Positives = 327/344 (95%), Gaps = 2/344 (0%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH
Sbjct: 88  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 147

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPSVAIGKDL+AARVTAANKIR+W K
Sbjct: 148 THVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSVAIGKDLQAARVTAANKIRLWNK 207

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPRF S EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP ARIAFI
Sbjct: 208 GVDSESFHPRFCSHEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPGARIAFI 267

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELE+MF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 268 GDGPYREELEEMFSGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 327

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGGIPDIIP +Q+GK G+LFNPGDLDDCL KLEPLL N ELR+TMG+AAR+EME
Sbjct: 328 PVVGARAGGIPDIIPPEQEGKTGFLFNPGDLDDCLGKLEPLLNNCELRKTMGKAAREEME 387

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWL--AKRIF 377
           KYDWRAATR IRNEQYNAAIWFWRKKRAQ LRPIQWL   KRI 
Sbjct: 388 KYDWRAATRKIRNEQYNAAIWFWRKKRAQFLRPIQWLNMGKRIL 431

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481678|ref|XP_002278868.2| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase [Vitis vinifera]

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/349 (87%), Positives = 330/349 (94%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWY+KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL IAKLLCVPIVMSYH
Sbjct: 170 SFPCPWYRKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALFIAKLLCVPIVMSYH 229

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+AARVTAAN+IR+W K
Sbjct: 230 THVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQAARVTAANRIRLWNK 289

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFLKRVMDRLPEARIAFI
Sbjct: 290 GVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFLKRVMDRLPEARIAFI 349

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSG+
Sbjct: 350 GDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGV 409

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ ELRET+G+AAR+EME
Sbjct: 410 PVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSHELRETIGKAAREEME 469

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 384
           KYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + E+NY
Sbjct: 470 KYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTPEINY 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740238|emb|CBI30420.3| unnamed protein product [Vitis vinifera]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/349 (87%), Positives = 330/349 (94%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWY+KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL IAKLLCVPIVMSYH
Sbjct: 87  SFPCPWYRKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALFIAKLLCVPIVMSYH 146

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+AARVTAAN+IR+W K
Sbjct: 147 THVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQAARVTAANRIRLWNK 206

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFLKRVMDRLPEARIAFI
Sbjct: 207 GVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFLKRVMDRLPEARIAFI 266

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSG+
Sbjct: 267 GDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGV 326

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ ELRET+G+AAR+EME
Sbjct: 327 PVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSHELRETIGKAAREEME 386

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 384
           KYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + E+NY
Sbjct: 387 KYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTPEINY 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568054|ref|XP_003552228.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/350 (87%), Positives = 325/350 (92%)

Query: 35  YSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY 94
           +SFPCP YQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY
Sbjct: 165 WSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY 224

Query: 95  HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK 154
           HTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI  DL AARVTAANKIR+W 
Sbjct: 225 HTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWN 284

Query: 155 KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF 214
           KGVDSE FHP++RS EMR RLSN EPDKPLI+HVGRLGVEKSLDFLKR+MDRLP+ARIAF
Sbjct: 285 KGVDSEKFHPKYRSHEMRLRLSNDEPDKPLIIHVGRLGVEKSLDFLKRLMDRLPDARIAF 344

Query: 215 IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG 274
           +GDGPYREELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLG VVLEAMSSG
Sbjct: 345 VGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSG 404

Query: 275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM 334
           IPVV  RAGGIPDIIP DQDGK  YL++PGDL+DCLSKL PLL+N+ELRETMG+AAR+EM
Sbjct: 405 IPVVAARAGGIPDIIPADQDGKTSYLYDPGDLEDCLSKLRPLLHNKELRETMGKAAREEM 464

Query: 335 EKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 384
           EKYDW+AATR IRNEQYNAAIWFWRKKRAQLLRP Q LAK  FPS +VNY
Sbjct: 465 EKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQRLAKHFFPSPQVNY 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140379|ref|XP_002323560.1| predicted protein [Populus trichocarpa] gi|222868190|gb|EEF05321.1| predicted protein [Populus trichocarpa]

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/347 (89%), Positives = 325/347 (93%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFP PWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL IAKLL VPIVMSYH
Sbjct: 83  SFPFPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALAIAKLLSVPIVMSYH 142

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLVKPMW++IKFLHRAADLTLVPS AIG+DLEAARVTAANKIR+W K
Sbjct: 143 THVPVYIPRYTFSWLVKPMWMIIKFLHRAADLTLVPSAAIGRDLEAARVTAANKIRVWNK 202

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPRFRS EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLKRVMDRLP ARIA I
Sbjct: 203 GVDSESFHPRFRSHEMRMRLSNGEPEKPLIVHVGRLGVEKSLDFLKRVMDRLPGARIAII 262

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMFTGMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 263 GDGPYREELEKMFTGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 322

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGGIPDIIP + DGK G+LFNPGDLDDCLSKLEPLL NQELRET+G+AARQ+ E
Sbjct: 323 PVVGARAGGIPDIIPPELDGKTGFLFNPGDLDDCLSKLEPLLDNQELRETIGKAARQDTE 382

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEV 382
           KYDW+AAT+ IRNEQY+AAIWFWR+ RAQL RPIQWL KR+FP  EV
Sbjct: 383 KYDWKAATKKIRNEQYSAAIWFWRENRAQLFRPIQWLVKRLFPIPEV 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523263|ref|XP_003530260.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/349 (87%), Positives = 324/349 (92%)

Query: 35  YSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY 94
           +SFPCP YQKVPLSLALSPRIISEVARFKPDIIHASSPGIM+FGAL IAKLLCVPIVMSY
Sbjct: 100 WSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMIFGALTIAKLLCVPIVMSY 159

Query: 95  HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK 154
           HTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI  DL AARVTAANKIR+W 
Sbjct: 160 HTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWN 219

Query: 155 KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF 214
           KGVDSE FHP++RS EMR RLSNGEPDKPLIVHVGRLGVEKSLDFLKR++DRLP+ARIAF
Sbjct: 220 KGVDSEKFHPKYRSHEMRLRLSNGEPDKPLIVHVGRLGVEKSLDFLKRLLDRLPDARIAF 279

Query: 215 IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG 274
           +GDGPYREELEKMF GMPAVFTGML+GEELSQAYASGDVFVMPSESETLGLVVLEAMSSG
Sbjct: 280 VGDGPYREELEKMFEGMPAVFTGMLVGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG 339

Query: 275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM 334
           IPVV   AGGIPDIIP DQDGK  YL+NPGD +DCLSKL PLL N+ELRETMG+AAR+EM
Sbjct: 340 IPVVAACAGGIPDIIPVDQDGKTSYLYNPGDFEDCLSKLRPLLLNKELRETMGKAAREEM 399

Query: 335 EKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN 383
           EKYDW+ ATR IRNEQYNAAIWFWRKKRAQLLRP QWLAKR FPS +VN
Sbjct: 400 EKYDWKEATRKIRNEQYNAAIWFWRKKRAQLLRPFQWLAKRFFPSPQVN 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496170|ref|XP_003516943.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/350 (88%), Positives = 324/350 (92%), Gaps = 2/350 (0%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWYQKVPLSLALSPRIIS VA FKPDIIHASSPGIMVFGALIIAKLL VPIVMSYH
Sbjct: 173 SFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYH 232

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI +W K
Sbjct: 233 THVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNK 292

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPRF+S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEARIAFI
Sbjct: 293 GVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFI 352

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 353 GDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 412

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGG+PDIIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR EME
Sbjct: 413 PVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEME 472

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIF--PSAEVN 383
           KYDWRAAT+ IRNE YNAAIWFWRKKRAQLLRP QWLA+RIF  P  E N
Sbjct: 473 KYDWRAATQKIRNENYNAAIWFWRKKRAQLLRPFQWLAQRIFQSPDPEAN 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504282|ref|XP_003520926.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/346 (88%), Positives = 322/346 (93%)

Query: 36  SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
           SFPCPWYQKVPLSLALSPRIIS VA FKPDIIHASSPGIMVFGALIIAKLL VPIVMSYH
Sbjct: 167 SFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYH 226

Query: 96  THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
           THVPVYIPRYTFSWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI +W K
Sbjct: 227 THVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNK 286

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
           GVDSESFHPRF+S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEARIAFI
Sbjct: 287 GVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFI 346

Query: 216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
           GDGPYREELEKMF GMPAVFTGML GEELS+AYASGDVFVMPSESETLGLVVLEAMSSGI
Sbjct: 347 GDGPYREELEKMFEGMPAVFTGMLGGEELSEAYASGDVFVMPSESETLGLVVLEAMSSGI 406

Query: 276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
           PVVG RAGG+PDIIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR EME
Sbjct: 407 PVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEME 466

Query: 336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAE 381
           KYDWRAATR IRNE Y AAIWFWRKKRAQLLRP QWLA+ IFPS +
Sbjct: 467 KYDWRAATRKIRNENYKAAIWFWRKKRAQLLRPFQWLAQPIFPSPD 512

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
TAIR|locus:2150059	510	SQD2 "sulfoquinovosyldiacylgly	0.903	0.682	0.801	2.4e-154
TIGR_CMR|BA_5012	380	BA_5012 "glycosyl transferase,	0.727	0.736	0.352	9.9e-39
UNIPROTKB|O06423	378	mgtA "GDP-mannose-dependent al	0.758	0.772	0.351	2.1e-36
UNIPROTKB|Q8NT41	413	mgtA "GDP-mannose-dependent al	0.748	0.697	0.344	2.1e-36
UNIPROTKB|A0QRG8	375	mgtA "GDP-mannose-dependent al	0.657	0.674	0.360	9.5e-34
TIGR_CMR|CHY_1041	380	CHY_1041 "glycosyl transferase	0.815	0.826	0.273	2.2e-25
UNIPROTKB|A0R043	382	pimB "GDP-mannose-dependent al	0.483	0.486	0.341	8.5e-19
UNIPROTKB|A5U3B9	381	pimC "GDP-mannose-dependent al	0.418	0.422	0.358	1.1e-18
UNIPROTKB|P0CF99	381	pimC "GDP-mannose-dependent al	0.418	0.422	0.358	1.1e-18
UNIPROTKB|Q65CC7	386	kanE "Glycosyltransferase KanE	0.698	0.696	0.266	2.2e-17

TAIR|locus:2150059 SQD2 "sulfoquinovosyldiacylglycerol 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1505 (534.8 bits), Expect = 2.4e-154, P = 2.4e-154
 Identities = 279/348 (80%), Positives = 316/348 (90%)

Query:    36 SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 95
             SFPCP+YQKVPLSLALSPRIISE+ARFKPDIIHASSPG+MVFGAL IAK+L VPIVMSYH
Sbjct:   162 SFPCPYYQKVPLSLALSPRIISEIARFKPDIIHASSPGVMVFGALAIAKMLSVPIVMSYH 221

Query:    96 THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKK 155
             THVPVYIPRYTFSWLVKPMW +I+FLHRAADLTLVPS AIGKDL AA  TAAN++R+W K
Sbjct:   222 THVPVYIPRYTFSWLVKPMWSIIRFLHRAADLTLVPSAAIGKDLIAAGATAANQLRLWNK 281

Query:   156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
             GVDSESF+PRFRS EMR RLSNGEP+KPL++HVGR+GVEKSL+ LK VMD+LPEARIAFI
Sbjct:   282 GVDSESFNPRFRSQEMRIRLSNGEPEKPLVIHVGRIGVEKSLELLKSVMDKLPEARIAFI 341

Query:   216 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 275
             GDGPY+E+LEK+FTGMPAVFTG L G+ELSQAYASGDVFVMPSESETLGLVVLEAMSSG+
Sbjct:   342 GDGPYKEDLEKLFTGMPAVFTGTLQGDELSQAYASGDVFVMPSESETLGLVVLEAMSSGL 401

Query:   276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 335
             PVV  RAGGIPDIIPEDQ+GK G+LFNPGD++DC++KL  LL+++E RE +G+AAR+E E
Sbjct:   402 PVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAAREETE 461

Query:   336 KYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN 383
             KYDWRAAT  IRNEQY+AAIWFWRKK+  +L PI WL KR+FP  E N
Sbjct:   462 KYDWRAATTKIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPEGN 509

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0008194 "UDP-glycosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA;IMP

GO:0046506 "sulfolipid biosynthetic process" evidence=TAS

GO:0046510 "UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TIGR_CMR|BA_5012 BA_5012 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 103/292 (35%), Positives = 153/292 (52%)

Query:    52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLV 111
             +PRI  E+  FKPD+IH ++P  M    L  AK L +P+V SYHT    Y+  Y   +L 
Sbjct:    73 TPRIRRELLSFKPDMIHIATPFNMGLCGLYYAKKLNIPVVGSYHTDFDAYLRYYKIEFLS 132

Query:   112 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM 171
               +W  +K+ H       VPS    + L   +      + IW +GVD   FHP + ++E+
Sbjct:   133 NMLWNYLKWFHSHMQKNFVPSP---ETLHQLKHKGFQALSIWGRGVDCNLFHPAY-NTEI 188

Query:   172 RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR--IAFI--GDGPYREELEKM 227
              +R       K ++ +VGR+  EK +D L+ ++ +    R  I ++  GDGP    L + 
Sbjct:   189 -FRKKYNITAKYVLSYVGRITPEKDIDTLQNLIVKSAHTRNDIHWLIAGDGPLATSLREA 247

Query:   228 FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD 287
                    FTG L G +L++AYA  ++ V PS +ET G VVLE+++ G PV+G  +GG+ +
Sbjct:   248 VPKTNVTFTGYLQGVDLAEAYACSNMMVFPSATETFGNVVLESLACGTPVIGANSGGVKN 307

Query:   288 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW 339
             II    DGK G L  P + D  LS +  LL N+E  E MG AA    +   W
Sbjct:   308 IIT---DGKTGVLCPPKNEDVFLSSIYSLLQNEEKLEQMGIAASSYAKSKSW 356

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|O06423 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 109/310 (35%), Positives = 157/310 (50%)

Query:    32 HHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 91
             H + S   P    +PL +    R++  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct:    62 HRVPSRMFPKVTTLPLGVPTF-RMLRALRGFDPDVVHLASPALLGYGGLHAARRLGVPTV 120

Query:    92 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 151
               Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +   ++  
Sbjct:   121 AVYQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIPRVHR-- 178

Query:   152 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 210
              W +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +       
Sbjct:   179 -WARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GAV 233

Query:   211 RIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 269
             R+  +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV E
Sbjct:   234 RLVIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQE 290

Query:   270 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA 329
             A++SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  A
Sbjct:   291 ALASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL--A 345

Query:   330 ARQEMEKYDW 339
             AR+ +    W
Sbjct:   346 ARRSVLGRSW 355

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0040007 "growth" evidence=IMP

UNIPROTKB|Q8NT41 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Corynebacterium glutamicum ATCC 13032 (taxid:196627)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 105/305 (34%), Positives = 152/305 (49%)

Query:    40 PWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP 99
             P    +P+ + L P + S +  + PDIIH +SP ++   A   A+ L +P +  Y T V 
Sbjct:    72 PLIDSLPIGVPL-PSVTSVLREYNPDIIHLASPFVLGGAAAFAARQLRIPAIAIYQTDVA 130

Query:   100 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS 159
              +  RY  + L    W  IK +H     TL PS      ++  R    N I  W +GVDS
Sbjct:   131 GFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIFHWARGVDS 187

Query:   160 ESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGD 217
             + FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  + ++  +GD
Sbjct:   188 KRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SDIQLVIVGD 243

Query:   218 GPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP 276
             GP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + EA +SG+P
Sbjct:   244 GPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQEAQASGVP 300

Query:   277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
              +G RAGG  D+I E   G  G L +  D  + L      + +      M  AA + ++ 
Sbjct:   301 TIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCAAAWEGVKD 357

Query:   337 YDWRA 341
               W A
Sbjct:   358 KTWEA 362

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

UNIPROTKB|A0QRG8 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 96/266 (36%), Positives = 140/266 (52%)

Query:    32 HHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 91
             H + S   P    +PL +   PR+I  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct:    59 HRVPSRMFPKITSLPLGVP-RPRMIGVLRGFDPDVVHLASPALLGYGGLHAARHLGVPSV 117

Query:    92 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 151
               + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+   ++  
Sbjct:   118 AVFQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIPRVHR-- 175

Query:   152 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 210
              W +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  V+    + 
Sbjct:   176 -WGRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLA-VLAARDDL 230

Query:   211 RIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 269
             ++  +GDG  R +L+   T +P AVFTG L G  L+ AYAS DVFV P E ET    V E
Sbjct:   231 QLVIVGDGVDRVKLQ---TVLPTAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQE 287

Query:   270 AMSSGIPVVGVRAGGIPDIIPEDQDG 295
             AM+SG+PV+   AGG  D++   + G
Sbjct:   288 AMASGVPVIAPDAGGPRDLVAPCRTG 313

GO:0000030 "mannosyltransferase activity" evidence=ISS

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1041 CHY_1041 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 92/336 (27%), Positives = 162/336 (48%)

Query:    31 FHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI 90
             F+  +S P P  ++  L+L  S ++   +   K D+IH  SP ++        + L +P+
Sbjct:    51 FYRFFSVPAPTNKEFHLALPFSFKVSKTLREEKVDLIHVHSPFLLGRLGQKTGRKLNIPV 110

Query:    91 VMSYHTHVPVYIPRYTFSWLVK---PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAA 147
             V +YHT    Y+  + F+         W  ++F ++ + + + P+  I +D    +    
Sbjct:   111 VFTYHTLYEEYVHYFPFARKTARAVTSWYTLQFANKCSAV-ICPTETI-RDYLCQKGLKT 168

Query:   148 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRV 203
                 I   G+D E F  +  SS ++  LS     K + + VGR+  EK++DFL    + V
Sbjct:   169 RSAVI-PTGIDLEPFS-KADSSWLKTTLSL--KGKKVCLFVGRVAPEKNVDFLLESFRIV 224

Query:   204 MDRLPEARIAFIGDGP----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE 259
                L +  +  +G GP    Y+++ E++  G    F G +  E++   YA  D+F+ PS 
Sbjct:   225 ASTLNDVVLVIVGGGPELPHYQKKAEELGLGNSVKFIGPVPPEKVPLFYAGADLFLFPSV 284

Query:   260 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 319
             +ET GLV  EA ++G+P VGVRA G   ++    DG  G+L  P   +    K+  LL +
Sbjct:   285 TETQGLVFAEAKAAGLPAVGVRAFGSKSMV---FDGVDGFLTGPNPREYA-EKVILLLRD 340

Query:   320 QELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 355
             + LR+   Q AR+  + +  +  T  +  + Y + I
Sbjct:   341 EALRKLFSQNARKNAQNFS-KEYTARLMYDLYQSLI 375

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|A0R043 pimB "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 244 (91.0 bits), Expect = 8.5e-19, P = 8.5e-19
 Identities = 71/208 (34%), Positives = 105/208 (50%)

Query:   156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD----RLPEAR 211
             GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct:   167 GVDTDRFAPD-PDARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query:   212 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 260
             +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct:   226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query:   261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 320
             E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct:   286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query:   321 ELRETMGQAARQ-EMEKYDWRAATRTIR 347
                  MG A R   ++ + WR  TR  R
Sbjct:   343 RRAAAMGVAGRHWALDNWQWR--TRGAR 368

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

UNIPROTKB|A5U3B9 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis H37Ra (taxid:419947)]

 Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:   128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 187
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:   188 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 243
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   244 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 292
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=ISS

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=ISS

UNIPROTKB|P0CF99 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:   128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 187
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:   188 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 243
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   244 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 292
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0047264 "heteroglycan alpha-mannosyltransferase activity" evidence=IDA

UNIPROTKB|Q65CC7 kanE "Glycosyltransferase KanE" [Streptomyces kanamyceticus (taxid:1967)]

 Score = 233 (87.1 bits), Expect = 2.2e-17, P = 2.2e-17
 Identities = 77/289 (26%), Positives = 134/289 (46%)

Query:    68 HASSPGIMVFGALIIAKLLCVPIVMSYHT--HVPVYIPRYTFSWLVKPM--WLVIKFLHR 123
             H    G   F   +++++L VP+V+  H+  ++  + P   F  +  P+  W     + +
Sbjct:    91 HCDGSGAAAFYPYLMSRILGVPLVVQIHSSRYLSQH-PTTLFERVTDPIAKWAERHAVRK 149

Query:   124 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS-ESFHPRFRSSEMRWRLSNGEPDK 182
             AA + ++   A  +    A++ A    R+     D  +      R +E+R R   G  D+
Sbjct:   150 AAAVLMLTDRARDEMRRKAQLPAERVHRLAYLASDQFKDADTEARRAELRERY--GLDDR 207

Query:   183 PLIVHVGRLGVEKSLDFLKRVMDRLP----EARIAFIGDGPYREELEKMF--TGMP--AV 234
             P++++VGR+  EK +++       L     + +    GDGP R +LEK+    G+     
Sbjct:   208 PIVLYVGRIAAEKGVEYYIEAAAELTRRGRDCQFVIAGDGPARPDLEKLIGARGLRDRVT 267

Query:   235 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD 294
              TG +  E +    + G++ V+PS  E LG+V+LE M+   P+V     G+  +I   +D
Sbjct:   268 ITGFMSHEFIPSMISLGELVVLPSRYEELGIVILECMTMRRPLVAHDVNGVNKLI---ED 324

Query:   295 GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ-AARQEMEKYDWRAA 342
             G  G +  P    +    +E LL + ELRE M + AA     KY   AA
Sbjct:   325 GTTGIVVPPFRTPEMADAVERLLDDPELRERMAENAAPLPAAKYSLSAA 373

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IDA

GO:1901133 "kanamycin biosynthetic process" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.246	LOW CONFIDENCE prediction!
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	385
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	0.0
cd03814	364	cd03814, GT1_like_2, This family is most closely r	1e-114
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	2e-66
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	7e-60
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	2e-47
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	2e-38
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	5e-36
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	5e-36
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	1e-34
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	4e-33
cd04962	371	cd04962, GT1_like_5, This family is most closely r	7e-33
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	4e-32
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	6e-32
cd03795	357	cd03795, GT1_like_4, This family is most closely r	1e-31
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	6e-31
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	4e-30
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	1e-29
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	1e-27
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	1e-27
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	5e-27
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	7e-27
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	1e-25
cd03813	475	cd03813, GT1_like_3, This family is most closely r	9e-25
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	2e-23
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	5e-23
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	4e-22
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	2e-21
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	3e-21
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	1e-20
cd03791	476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	2e-18
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	1e-17
cd04949	372	cd04949, GT1_gtfA_like, This family is most closel	6e-17
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	6e-17
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	9e-17
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	2e-16
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	2e-15
COG0297	487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	5e-15
TIGR02095	473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	1e-14
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	7e-13
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	2e-11
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	2e-11
cd04955	363	cd04955, GT1_like_6, This family is most closely r	6e-11
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	9e-11
TIGR02472	439	TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas	2e-10
PRK00654	466	PRK00654, glgA, glycogen synthase; Provisional	3e-10
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	4e-10
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	8e-10
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	1e-09
cd03818	396	cd03818, GT1_ExpC_like, This family is most closel	1e-09
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	2e-09
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	2e-09
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	3e-09
TIGR02470	784	TIGR02470, sucr_synth, sucrose synthase	2e-07
PRK09922	359	PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo	3e-06
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	6e-06
TIGR02918	500	TIGR02918, TIGR02918, accessory Sec system glycosy	6e-06
PRK14098	489	PRK14098, PRK14098, glycogen synthase; Provisional	2e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	2e-05
PRK15490	578	PRK15490, PRK15490, Vi polysaccharide biosynthesis	4e-05
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	2e-04
TIGR03087	397	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH	4e-04
PRK14099	485	PRK14099, PRK14099, glycogen synthase; Provisional	5e-04
pfam13439	171	pfam13439, Glyco_transf_4, Glycosyltransferase Fam	8e-04
PLN00142	815	PLN00142, PLN00142, sucrose synthase	0.001
PLN02939	977	PLN02939, PLN02939, transferase, transferring glyc	0.002
PRK10307	412	PRK10307, PRK10307, putative glycosyl transferase;	0.002

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score =  701 bits (1811), Expect = 0.0
 Identities = 282/352 (80%), Positives = 316/352 (89%)

Query: 33  HIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM 92
             +SFPCP+YQKVPLSLALSPRIISEVARFKPD+IHASSPGIMVFGAL  AKLLCVP+VM
Sbjct: 114 GSWSFPCPFYQKVPLSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173

Query: 93  SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 152
           SYHTHVPVYIPRYTFSWLVKPMW +I+FLHRAADLTLV S A+GK+LEAA VTAAN+IR+
Sbjct: 174 SYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRV 233

Query: 153 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 212
           W KGVDSESFHPRFRS EMR RLS GEP+KPLIV+VGRLG EK+LDFLKRVM+RLP AR+
Sbjct: 234 WNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPGARL 293

Query: 213 AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS 272
           AF+GDGPYREELEKMF G P VFTGML G+ELSQAYASGDVFVMPSESETLG VVLEAM+
Sbjct: 294 AFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMA 353

Query: 273 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
           SG+PVV  RAGGIPDIIP DQ+GK G+L+ PGD+DDC+ KLE LL + ELRE MG AAR+
Sbjct: 354 SGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAARE 413

Query: 333 EMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 384
           E+EK+DWRAATR +RNEQY+AAIWFWRKKRAQLL P+QWL  ++FP+ EVN 
Sbjct: 414 EVEKWDWRAATRKLRNEQYSAAIWFWRKKRAQLLGPVQWLPAQLFPAPEVNS 465

Length = 465

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  337 bits (867), Expect = e-114
 Identities = 129/317 (40%), Positives = 175/317 (55%), Gaps = 13/317 (4%)

Query: 31  FHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI 90
              + S P P Y ++ L+L    R+   +  F PD++H ++PG +   AL  A+ L +P+
Sbjct: 51  VVPVPSVPLPGYPEIRLALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPV 110

Query: 91  VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI 150
           V SYHT  P Y+  Y    L    W  +++ H  AD  LVPS ++  +L A       ++
Sbjct: 111 VTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGF---RRV 167

Query: 151 RIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE- 209
           R+W +GVD+E FHPR R   +R RL  G PD+P++++VGRL  EK+L+ L      L   
Sbjct: 168 RLWPRGVDTELFHPRRRDEALRARL--GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR 225

Query: 210 --ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV 267
              R+  +GDGP R  LE         F G L GEEL+ AYAS DVFV PS +ET GLVV
Sbjct: 226 PPVRLVIVGDGPARARLEA--RYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVV 283

Query: 268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 327
           LEAM+SG+PVV   AGG  DI+    DG+ G L  PGD +   + L  LL + ELR  M 
Sbjct: 284 LEAMASGLPVVAPDAGGPADIV---TDGENGLLVEPGDAEAFAAALAALLADPELRRRMA 340

Query: 328 QAARQEMEKYDWRAATR 344
             AR E E+  W A   
Sbjct: 341 ARARAEAERRSWEAFLD 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  214 bits (547), Expect = 2e-66
 Identities = 104/317 (32%), Positives = 159/317 (50%), Gaps = 21/317 (6%)

Query: 34  IYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMS 93
            +  P   Y    L L +   +I  +    PDI+H  +P  +    L +A+ L +P+V +
Sbjct: 55  PFRVPTFKYPDFRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVAT 114

Query: 94  YHTHVPVYIPRYTFSWLVKP----MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK 149
           YHT    Y        L+        L  +F +R  D  + PS  I   L    V     
Sbjct: 115 YHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRC-DAVIAPSEKIADLLREYGVKR--P 171

Query: 150 IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMD 205
           I +   G+D + F P     E R        D+P++++VGRL  EK++DFL     R++ 
Sbjct: 172 IEVIPTGIDLDRFEPVDGDDERRKL--GIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLK 229

Query: 206 RLPEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESE 261
             P+ ++  +GDGP REELE++   +      +FTG +  EEL   Y + D+FV  S +E
Sbjct: 230 EEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTE 289

Query: 262 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE 321
           T GLV+LEAM++G+PVV V A G+PD++    DG+ G+LF PGD +     L  LL + E
Sbjct: 290 TQGLVLLEAMAAGLPVVAVDAPGLPDLV---ADGENGFLFPPGD-EALAEALLRLLQDPE 345

Query: 322 LRETMGQAARQEMEKYD 338
           LR  + + A +  EK+ 
Sbjct: 346 LRRRLSKNAEESAEKFS 362

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  197 bits (504), Expect = 7e-60
 Identities = 107/342 (31%), Positives = 167/342 (48%), Gaps = 18/342 (5%)

Query: 16  AFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIM 75
             G         +     +   P    +++ L L L+ R+   + R + D++HA     +
Sbjct: 38  TPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLAL 97

Query: 76  VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI 135
           +  AL  A+LL +P+V++ H  +    P      L+K    + +   R AD  +  S A 
Sbjct: 98  LAAALA-ARLLGIPLVLTVH-GLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEAT 155

Query: 136 GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK 195
            ++L         KI +   GVD+E F P  R+     R      D+P+I+ VGRL   K
Sbjct: 156 REELRELGGVPPEKITVIPNGVDTERFRPAPRA---ARRRLGIPEDEPVILFVGRLVPRK 212

Query: 196 SLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFT--GMPA--VFTGMLLGEELSQA 247
            +D L     ++    P+ R+  +GDGP REELE +    G+     F G +  E+L   
Sbjct: 213 GVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPAL 272

Query: 248 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD 307
           YA+ DVFV+PS  E  GLV+LEAM++G+PVV    GGIP+++   +DG+ G L  PGD +
Sbjct: 273 YAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVV---EDGETGLLVPPGDPE 329

Query: 308 DCLSKLEPLLYNQELRETMGQAARQEMEK--YDWRAATRTIR 347
                +  LL + ELR  +G+AAR+ + +     R A RT  
Sbjct: 330 ALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEE 371

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  165 bits (419), Expect = 2e-47
 Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 28/337 (8%)

Query: 17  FGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVA--RFKPDIIHASSPGI 74
             L       +      +     P  +   L L  +  ++  +   RF+PD+IHA     
Sbjct: 45  KLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYP 104

Query: 75  MVFGALIIAKLLCVPIVMSYH-THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV 133
             F A ++ + L +P+V++ H + V +   +     L++          R AD  +  S 
Sbjct: 105 DGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRAL-------RRADAVIAVSE 157

Query: 134 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV 193
           A+  +L+A  +    K+ +   GVD+E F P         R      DK +I+ VGRL  
Sbjct: 158 ALADELKALGIDP-EKVTVIPNGVDTERFSPA---DRAEARKLGLPEDKKVILFVGRLVP 213

Query: 194 EKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELS 245
            K +D+L     R++ + P+  +  +GDGP RE LE +   +       F G +  EE+ 
Sbjct: 214 RKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVP 273

Query: 246 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 305
             YA+ DVFV+PS  E  GLV+LEAM+ G+PVV    GGIP+II    DG+ G L  PGD
Sbjct: 274 AYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEII---TDGENGLLVPPGD 330

Query: 306 LDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRA 341
            +     +  LL +  LR  +G+AAR+ + E++ W  
Sbjct: 331 PEALAEAILRLLADPWLR--LGRAARRRVAERFSWEN 365

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  141 bits (356), Expect = 2e-38
 Identities = 119/360 (33%), Positives = 181/360 (50%), Gaps = 32/360 (8%)

Query: 9   FLQLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFK----P 64
              L +   G +  +          I     P      L + L P ++  +   K     
Sbjct: 25  AKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPY 84

Query: 65  DIIHASS--PGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH 122
           DIIHA S         AL++ KLL +P+V++ H  +P  +       L+  + L++K L 
Sbjct: 85  DIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLK 144

Query: 123 RA----ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG 178
           +A    AD  +  S A+ + LEA  V   NKI +   G+D+E F P       R  L   
Sbjct: 145 KALRLLADRVIAVSPALKELLEALGV--PNKIVVIPNGIDTEKFAP------ARIGLLP- 195

Query: 179 EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPY-REELEKMFTGMPA 233
           E  K ++++VGRL  EK LD L     ++  R P+ ++  +GDGP  REELEK+   +  
Sbjct: 196 EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGL 255

Query: 234 ----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII 289
                F G +  EEL++  AS DVFV+PS SE  GLV+LEAM++G PV+    GGIP+++
Sbjct: 256 EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVV 315

Query: 290 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRN 348
              +DG+ G L  PGD+++    LE LL + ELRE +G+AAR+ + E++ W      +  
Sbjct: 316 ---EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLE 372

Length = 381

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  134 bits (340), Expect = 5e-36
 Identities = 77/311 (24%), Positives = 123/311 (39%), Gaps = 36/311 (11%)

Query: 43  QKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYHTHVPV 100
           +          R+   + R +PD++H       ++G   +A  L    P++         
Sbjct: 60  RPGRPDPGALLRLYKLIRRLRPDVVHTWMYHADLYG--GLAARLAGVPPVIWGIRH---- 113

Query: 101 YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI-----GKDLEAARVTAANKIRIWKK 155
                  S L                L+    + +       +   A      KI +   
Sbjct: 114 -------SDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPN 166

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEAR 211
           GVD+E F P   +            D  LI  V RL  +K    L      ++ + P AR
Sbjct: 167 GVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNAR 226

Query: 212 IAFIGDGPYREELEKMFT---GMPAVFTGMLLGE--ELSQAYASGDVFVMPSESETLGLV 266
           +  +GDGP R  LE +     G+       LLGE  ++     + DVFV+ S SE    V
Sbjct: 227 LLLVGDGPDRANLELLALKELGLEDKVI--LLGERSDVPALLNALDVFVLSSLSEGFPNV 284

Query: 267 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM 326
           +LEAM+ G+PVV    G   +++     G  G+L  PGD +     +E LL +  LR+ +
Sbjct: 285 LLEAMACGLPVVATDVGDNAELV-----GDTGFLVPPGDPEALAEAIEALLADPALRQAL 339

Query: 327 GQAARQEMEKY 337
           G+AAR+ +E+ 
Sbjct: 340 GEAARERIEEN 350

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  134 bits (338), Expect = 5e-36
 Identities = 86/315 (27%), Positives = 133/315 (42%), Gaps = 47/315 (14%)

Query: 44  KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP 103
           K    L    R+   + + KPD++ +           ++A  L   +++  H  + + + 
Sbjct: 62  KSLRDLLAILRLRRLLRKEKPDVVISHL-TTTPNVLALLAARLGTKLIVWEHNSLSLELK 120

Query: 104 RYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFH 163
           R         + L+I+ L+R AD  +  S  + +DL        +KI +    +D E   
Sbjct: 121 RK------LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEI- 173

Query: 164 PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGP 219
            R  + E         PD P+I+ VGRL  +K  D L      +    P+AR+  +GDGP
Sbjct: 174 -RALAEE--PLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP 230

Query: 220 YREELEKM-----------FTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGL 265
            REELE +           F G    P  +        L  A    D+FV+ S  E    
Sbjct: 231 LREELEALAKELGLADRVHFLGFQSNPYPY--------LKAA----DLFVLSSRYEGFPN 278

Query: 266 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD---LDDCLSKLEPLLYNQEL 322
           V+LEAM+ G PVV     G  +I+   +DG+ G L   GD   L      L  LL + EL
Sbjct: 279 VLLEAMALGTPVVATDCPGPREIL---EDGENGLLVPVGDEAALAAAALALLDLLLDPEL 335

Query: 323 RETMGQAARQEMEKY 337
           RE +  AAR+ + + 
Sbjct: 336 RERLAAAARERVARE 350

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score =  130 bits (329), Expect = 1e-34
 Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 51/320 (15%)

Query: 52  SPRIISEVARFKPDIIHASSPGIMVFG-----ALIIAKLLCVPIVMSYH----THVPVYI 102
           +P++   + R +PD++HA       FG     AL +A+ L VP+V+++H    T     +
Sbjct: 71  APQLRRLLRRHRPDLVHAH------FGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL 124

Query: 103 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF 162
            R  ++          + L R A L +  S  I   L A       K+ +   GVD+  F
Sbjct: 125 LRSRWALY----ARRRRRLARRAALFIAVSQFIRDRLLALGFPPE-KVHVHPIGVDTAKF 179

Query: 163 HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS-----LDFLKRVMDRLPEARIAFIGD 217
            P                  P I+ VGR  VEK      L+   R+  R+PE R+  IGD
Sbjct: 180 TPA-----------TPARRPPRILFVGRF-VEKKGPLLLLEAFARLARRVPEVRLVIIGD 227

Query: 218 GPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVV 267
           GP    LE +   +       F G     E+ +      +F+ PS      ++E L +V+
Sbjct: 228 GPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVL 287

Query: 268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 327
           LEA +SG+PVV  R GGIP+ +   +DG+ G L   GD+    + L  LL + +LR  MG
Sbjct: 288 LEAQASGVPVVATRHGGIPEAV---EDGETGLLVPEGDVAALAAALGRLLADPDLRARMG 344

Query: 328 QAARQE-MEKYDWRAATRTI 346
            A R+   E++D R  T  +
Sbjct: 345 AAGRRRVEERFDLRRQTAKL 364

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  127 bits (321), Expect = 4e-33
 Identities = 93/307 (30%), Positives = 136/307 (44%), Gaps = 36/307 (11%)

Query: 64  PDIIHA----SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS---WLVKPMWL 116
           PD+IHA    S    +V  AL++A+ L +P+V ++H+   +   +          +P   
Sbjct: 102 PDLIHAHYWDSG---LV--ALLLARRLGIPLVHTFHS---LGAVKRRHLGAADTYEPARR 153

Query: 117 VI--KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR 174
           +   + L RAAD  +  +    ++L +       +IR+   GVD E F P  R+   R R
Sbjct: 154 IEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRAR 213

Query: 175 LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR-----------IAFIGDGPY--R 221
           L   +PDKP I+ VGRL   K +D L R    LPE R              I        
Sbjct: 214 LLR-DPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEEL 272

Query: 222 EELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV 280
            EL +    +  V F G +  E+L   Y + DVFV P+  E  GL  LEAM+ G+PVV  
Sbjct: 273 RELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVAT 332

Query: 281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDW 339
             GG  DI+    DG  G L +P D +   + L  LL +  LR  + +A  +     Y W
Sbjct: 333 AVGGPRDIV---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTW 389

Query: 340 RAATRTI 346
                 +
Sbjct: 390 ERVAARL 396

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  126 bits (318), Expect = 7e-33
 Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 75/347 (21%)

Query: 30  FFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHA------SSPGIMVFGALIIA 83
           FFH +     P +Q  P  LAL+ +I     R+K D++H       +    +      I 
Sbjct: 51  FFHEVEVPQYPLFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLARE---IL 107

Query: 84  KLLCVPIVMSYH-THV------PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIG 136
               +P+V + H T +      P + P   FS            + ++  +T V      
Sbjct: 108 GKKDLPVVTTLHGTDITLVGQDPSFQPATRFS------------IEKSDGVTAVSESLRQ 155

Query: 137 KDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS 196
           +  E   +T   +I +    VD + F P+   +  R         + +++H+        
Sbjct: 156 ETYELFDIT--KEIEVIPNFVDEDRFRPKPDEALKRRLG--APEGEKVLIHIS------- 204

Query: 197 LDF--LKRVMD----------RLPEARIAFIGDGPYREELEKMFTGMPAVFTGML----- 239
            +F  +KR+ D           +P AR+  +GDGP R   E++     A   G+      
Sbjct: 205 -NFRPVKRIDDVIRIFAKVRKEVP-ARLLLVGDGPERSPAERL-----ARELGLQDDVLF 257

Query: 240 LG--EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 297
           LG  + + +  +  D+F++PSE E+ GL  LEAM+ G+PVV   AGGIP+++   + G+ 
Sbjct: 258 LGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVV---KHGET 314

Query: 298 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 344
           G+L + GD++        LL + EL +   +AAR        RAA R
Sbjct: 315 GFLVDVGDVEAMAEYALSLLEDDELWQEFSRAAR-------NRAAER 354

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score =  118 bits (298), Expect = 4e-32
 Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 181 DKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKM--FTGMPA- 233
           DKP+I+ VGRL  EK LD L      L    P  ++  +GDG   ++L+K+    G+   
Sbjct: 1   DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDN 60

Query: 234 -VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 292
            +F G +  E+L + Y   D+FV+PS  E  GLV+LEAM++G+PV+    GG  +I+   
Sbjct: 61  VIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIV--- 117

Query: 293 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
           +DG+ G L +PGD +     +E LL ++ELRE +G+ AR+
Sbjct: 118 KDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  123 bits (312), Expect = 6e-32
 Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 29/320 (9%)

Query: 47  LSLALSPRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTH---VPVYI 102
           LS ALS  +     R +PD+I A+SP +++   AL++A+L   P V             +
Sbjct: 83  LSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFV--LEVRDLWPESAV 140

Query: 103 PRYTF---SWLVKPM-WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD 158
                   S L + +  L  + ++R AD  +V S  + + L    V    KI +   GVD
Sbjct: 141 ALGLLKNGSLLYRLLRKLE-RLIYRRADAIVVISPGMREYLVRRGV-PPEKISVIPNGVD 198

Query: 159 SESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFI 215
            E F P    ++   R   G  DK ++++ G +G  + LD L      L   P+ R   +
Sbjct: 199 LELFKPP--PADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV 256

Query: 216 GDGPYREELEKMFTGMPA---VFTGMLLGEELSQAYASGDVFVMP-SESETLGLVV---- 267
           GDGP +EEL+++   +      F G +  EEL +  A+ DV ++P         V     
Sbjct: 257 GDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKL 316

Query: 268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 327
            E M++G PV+    G   +++   ++   G +  PGD +   + +  LL + E R  MG
Sbjct: 317 FEYMAAGKPVLASVDGESAELV---EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMG 373

Query: 328 QAARQ-EMEKYDWRAATRTI 346
           +  R+   EK+        +
Sbjct: 374 ENGRRYVEEKFSREKLAERL 393

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  122 bits (308), Expect = 1e-31
 Identities = 89/314 (28%), Positives = 134/314 (42%), Gaps = 30/314 (9%)

Query: 31  FHHIYSFPCPWYQKVPLSLALSPRIISEVA--RFKPDIIHASSPGIMVFGALIIAKLLC- 87
            +       P       S   SP    ++     K D+IH   P  +      +A LL  
Sbjct: 50  RNGHRVIRAP-SLLNVASTPFSPSFFKQLKKLAKKADVIHLHFPNPLAD----LALLLLP 104

Query: 88  --VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVT 145
              P+V+ +H+ +   + +     L +P  L  +FL RA D  +  S    +     R  
Sbjct: 105 RKKPVVVHWHSDI---VKQKLLLKLYRP--LQRRFLRRA-DAIVATSPNYAETSPVLR-R 157

Query: 146 AANKIRIWKKGVDSESF-HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM 204
             +K+R+   G+D   +  P      +  R       +P  + VGRL   K LD L    
Sbjct: 158 FRDKVRVIPLGLDPARYPRPDALEEAIWRR----AAGRPFFLFVGRLVYYKGLDVLLEAA 213

Query: 205 DRLPEARIAFIGDGPYREELEKMFT---GMPAV-FTGMLLGEELSQAYASGDVFVMPS-- 258
             LP+A +  +G+GP   ELE +      +  V F G L  EE +   A+ DVFV PS  
Sbjct: 214 AALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVE 273

Query: 259 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY 318
            SE  G+V+LEAM+ G PV+    G     +  +  G  G +  PGD       +  LL 
Sbjct: 274 RSEAFGIVLLEAMAFGKPVISTEIGTGGSYV--NLHGVTGLVVPPGDPAALAEAIRRLLE 331

Query: 319 NQELRETMGQAARQ 332
           + ELRE +G+AAR+
Sbjct: 332 DPELRERLGEAARE 345

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score =  120 bits (303), Expect = 6e-31
 Identities = 87/327 (26%), Positives = 138/327 (42%), Gaps = 39/327 (11%)

Query: 23  LFFWILNFFHHIYSFPCPWYQKVPLSLALSP---RIISEVARFKPDIIHASSPGIMVFGA 79
           L        H          + +  SLAL      +  E+ R   D IHA         A
Sbjct: 36  LRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVA 95

Query: 80  LIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL 139
           ++ ++L  +P   + H    ++           P  + +      AD  +  S    + L
Sbjct: 96  MLASRLGGIPYSFTAHGKD-IF---------RSPDAIDLDEKLARADFVVAISEYNRQQL 145

Query: 140 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEK 195
                   +KI +   GVD E F PR               +   I+ VGRL    G++ 
Sbjct: 146 IRLLGCDPDKIHVVHCGVDLERFPPR---------PPPPPGEPLRILSVGRLVEKKGLDY 196

Query: 196 SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT--GMPAV--FTGMLLGEELSQAYASG 251
            L+ L  + DR  + R+  +GDGP R+ELE +    G+       G    EE+ +   + 
Sbjct: 197 LLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA 256

Query: 252 DVFVMPS------ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 305
           D+FV+PS      + E L +V++EAM+ G+PV+     GIP+++   +DG+ G L  PGD
Sbjct: 257 DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELV---EDGETGLLVPPGD 313

Query: 306 LDDCLSKLEPLLYNQELRETMGQAARQ 332
            +     +E LL + ELR  MG+A R 
Sbjct: 314 PEALADAIERLLDDPELRREMGEAGRA 340

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  118 bits (298), Expect = 4e-30
 Identities = 91/315 (28%), Positives = 134/315 (42%), Gaps = 51/315 (16%)

Query: 54  RIISEVARFKPDIIHASSPGIMVFGAL---IIAKLLC-VPIVMSYH-----T---HVPVY 101
            +IS++     DI+H      +  G L    ++KLL   P+V + H     T   H P  
Sbjct: 42  ALISKIEIINADIVHL---HWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGG 98

Query: 102 IPRYTFS-----------------WLVKPMWLVIKFLHRAADLTLV-PSVAIGKDLEAAR 143
             RY                    W+    W   +      +LT+V PS  +     ++ 
Sbjct: 99  CDRYKTECGNCPQLGSYPEKDLSRWI----WRRKRKAWADLNLTIVAPSRWLADCARSSS 154

Query: 144 VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE---KSLDFL 200
           +     I +   G+D+  F PR +  E R RL     DK +I+  G +G     K  D L
Sbjct: 155 LFKGIPIEVIPNGIDTTIFRPRDKR-EARKRL-GLPADKKIIL-FGAVGGTDPRKGFDEL 211

Query: 201 KRVMDRLPEA---RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE-LSQAYASGDVFVM 256
              + RL E     I  +  G    E+       P  + G L  +E L+  Y++ DVFV+
Sbjct: 212 IEALKRLAERWKDDIELVVFGASDPEIPPDL-PFPVHYLGSLNDDESLALIYSAADVFVV 270

Query: 257 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL 316
           PS  E      +EA++ G PVV    GGIPDI+     G  GYL  PGD +D    +E L
Sbjct: 271 PSLQENFPNTAIEALACGTPVVAFDVGGIPDIV---DHGVTGYLAKPGDPEDLAEGIEWL 327

Query: 317 LYNQELRETMGQAAR 331
           L + + RE +G+AAR
Sbjct: 328 LADPDEREELGEAAR 342

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  116 bits (294), Expect = 1e-29
 Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 38/301 (12%)

Query: 54  RIISEVARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS--W 109
           R+   + + +PDI+H  +  PGI+     + A+L  VP V+ Y  H   ++         
Sbjct: 71  RLYRLLRKERPDIVHTHTPKPGIL---GRLAARLAGVPKVI-YTVHGLGFVFTSGGLKRR 126

Query: 110 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK-KGVDSESFHPRFRS 168
           L   +    +   R  D  +  +           +    K  +    GVD + F P    
Sbjct: 127 LYLLLE---RLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPS--- 180

Query: 169 SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREEL 224
                       D P+ + V RL  +K +D L    + +  + P  R+  +GDG      
Sbjct: 181 ------PEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPA 234

Query: 225 EKM----FTGMPAVFTGMLLG--EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV 278
             +          V     LG  +++ +  A+ DVFV+PS  E L  V+LEAM+ G PV+
Sbjct: 235 AILEIEKLGLEGRVE---FLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVI 291

Query: 279 GVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KY 337
                G  + +    DG  G+L  PGD +     +E L+ + ELR  MGQAAR+  E ++
Sbjct: 292 ATDVPGCREAV---IDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEF 348

Query: 338 D 338
           D
Sbjct: 349 D 349

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  111 bits (280), Expect = 1e-27
 Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 54/305 (17%)

Query: 54  RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKP 113
           R+   +   KPD++ +    ++ F  L    L  V +++S H     Y  R     L   
Sbjct: 74  RLRKLLKNNKPDVVISFLTSLLTF--LASLGLKIVKLIVSEHNSPDAYKKRLRRLLL--- 128

Query: 114 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI---WKKGVDSESFHPRFRSSE 170
                + L+R AD  +V +     D           + +            F P   SS+
Sbjct: 129 ----RRLLYRRADAVVVLTEE---DRALYYKKFNKNVVVIPNPL------PFPPEEPSSD 175

Query: 171 MRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEK 226
           ++            I+ VGRL  +K  D L     ++  + P+ ++  +GDGP RE LE 
Sbjct: 176 LK---------SKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEA 226

Query: 227 M---------FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV 277
           +            +          + + + YA   +FV+ S  E   +V+LEAM+ G+PV
Sbjct: 227 LIKELGLEDRVILLGFT-------KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV 279

Query: 278 VGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
           +      G  +II   +DG  G L   GD++     L  L+ ++ELR+ MG  AR+  E+
Sbjct: 280 ISFDCPTGPSEII---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAER 336

Query: 337 YDWRA 341
           +    
Sbjct: 337 FSIEN 341

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  111 bits (280), Expect = 1e-27
 Identities = 81/319 (25%), Positives = 126/319 (39%), Gaps = 37/319 (11%)

Query: 43  QKVPLSLALSPRIISEVARFKPDIIHASSPGI---MVFGALIIAKLLCVPIVMSYHTHVP 99
                    S      +   + DI+H    G+       A   A+   +P V+S H  + 
Sbjct: 67  NLARYLFPPSLLAWLRLNIREADIVHVH--GLWSYPSLAAARAARKYGIPYVVSPHGMLD 124

Query: 100 VYIPRYTFSWLVKPMWLVI---KFLHRAADLTLVPSVAIGKDLEAARVT---AANKIRIW 153
            +   +    L K +   +   + L  AA +            EAA +        I + 
Sbjct: 125 PWALPH--KALKKRLAWFLFERRLLQAAAAVHATSEQ------EAAEIRRLGLKAPIAVI 176

Query: 154 KKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLPE 209
             GVD   F         R       PDK +I+ +GRL  +K LD L        +R P+
Sbjct: 177 PNGVDIPPFAALPSRGRRRKF--PILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPD 234

Query: 210 ARIAFIG--DGPYREELEKMFT---GMPAV-FTGMLLGEELSQAYASGDVFVMPSESETL 263
             +   G  +G YR EL+++         V FTGML GE+ + A A  D+FV+PS SE  
Sbjct: 235 WHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENF 294

Query: 264 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELR 323
           G+VV EA++ G PVV        ++I        G++ +    D   + L   L   +  
Sbjct: 295 GIVVAEALACGTPVVTTDKVPWQELIEYG----CGWVVDDDV-DALAAALRRALELPQRL 349

Query: 324 ETMGQAARQ-EMEKYDWRA 341
           + MG+  R    E++ W A
Sbjct: 350 KAMGENGRALVEERFSWTA 368

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score =  110 bits (276), Expect = 5e-27
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 42/318 (13%)

Query: 49  LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP---RY 105
           +A+ P++   + + +PDI+H  +  +    A + A L  VP  +       V+      +
Sbjct: 67  VAVYPQLYRLLRQLRPDIVH--TRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNW 124

Query: 106 TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEA-----ARVTAANKIRIWKKGVDSE 160
            + WL +   L    +H          VA+ +DLE       +V  A   +I+  GVD+E
Sbjct: 125 KYRWLRR---LYRPLIHHY--------VAVSRDLEDWLRGPVKVPPAKIHQIYN-GVDTE 172

Query: 161 SFHPRFRSSEMRWRLSN---GEPDKPLIVHVGRLGVEKSLDFLKR----VMDRLPE---- 209
            FHP   S   R  +        +  ++  VGRL   K    L R    ++ +LPE    
Sbjct: 173 RFHP---SRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAER 229

Query: 210 ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGE--ELSQAYASGDVFVMPSESETLGLVV 267
            R+  +GDGP R   E+M           L GE  ++     + D+FV+PS +E +   +
Sbjct: 230 LRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTI 289

Query: 268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 327
           LEAM+SG+PV+    GG P+++   Q G  G L  PGD       L+P + +   R   G
Sbjct: 290 LEAMASGLPVIATAVGGNPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHG 346

Query: 328 QAARQEME-KYDWRAATR 344
            A R   E ++   A   
Sbjct: 347 AAGRARAEQQFSINAMVA 364

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score =  109 bits (275), Expect = 7e-27
 Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 58/331 (17%)

Query: 30  FFHHIYSFPCPWYQKVPLSLALSPRIISEVAR-FKPDIIHA------SSPGIM---VFGA 79
           FFH +     P +Q  P  LAL+ +I  EVA+  K D++H       +    +   + G 
Sbjct: 51  FFHEVEVNQYPLFQYPPYDLALASKIA-EVAKEEKLDLLHVHYAIPHAIAAYLARQMLGK 109

Query: 80  LIIAKLLCVPIVMSYH-THVPV--YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIG 136
             I     +PIV + H T + +    P +      KP    ++F    +D     S ++ 
Sbjct: 110 EGID----IPIVTTLHGTDITLVGADPSF------KP---AVRFSIEKSDGVTAVSESLK 156

Query: 137 KD-LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK 195
           ++  E   +     I +    VD++ +  +     ++ +L     D+ +++H+       
Sbjct: 157 EETYELFDID--KPIEVIPNFVDTDRYRRK-NDPALKRKLGAP-EDEKVLIHIS------ 206

Query: 196 SLDF--LKRVMD----------RLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-- 241
             +F  +KRV D           +P A++  +GDGP R   E++   +      + LG  
Sbjct: 207 --NFRPVKRVEDVIEVFARVQQEVP-AKLLLVGDGPERSPAEQLVRELGLTDRVLFLGKQ 263

Query: 242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF 301
           +++++  +  D+F++PSE E+ GL  LEAM+ G+PV+   AGGIP+++   + G  G+L 
Sbjct: 264 DDVAELLSISDLFLLPSEKESFGLAALEAMACGVPVIASNAGGIPEVV---EHGVTGFLC 320

Query: 302 NPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
           + GD++        LL ++EL +    AAR+
Sbjct: 321 DVGDVETMAEYAISLLEDEELLQRFSAAARE 351

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  105 bits (265), Expect = 1e-25
 Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 23/319 (7%)

Query: 37  FPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT 96
              P      L   L       +     D++H+            + +L  VP+V++ H 
Sbjct: 59  LRLPRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNT------APLLRLRGVPVVVTIHD 112

Query: 97  HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG 156
            +P+  P Y      +    +++   R AD  +  S A  +DL        +KI +   G
Sbjct: 113 LIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLG 172

Query: 157 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEA----RI 212
           VD     P   +  +R         +P  ++VG +   K+L+ L     RLP      ++
Sbjct: 173 VDPRFRPPPAEAEVLRALYL---LPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL 229

Query: 213 AFIG-DGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVV 267
             +G  G   EEL      +       F G +  EEL+  Y     FV PS  E  GL V
Sbjct: 230 VIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPV 289

Query: 268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 327
           LEAM+ G PV+      +P++      G     F+P D +   + +E LL +  LRE + 
Sbjct: 290 LEAMACGTPVIASNISSLPEVA-----GDAALYFDPLDPEALAAAIERLLEDPALREELR 344

Query: 328 QAARQEMEKYDWRAATRTI 346
           +      +++ W    R  
Sbjct: 345 ERGLARAKRFSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  105 bits (263), Expect = 9e-25
 Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 69/326 (21%)

Query: 55  IISEVARFKP--DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI-PRY------ 105
           +++ +AR  P  D+ HA S G       +       P +++ H    +Y   R       
Sbjct: 163 LLAAIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHG---IYTRERKIELLQA 219

Query: 106 -TFSWLVKPMWL-----VIKFLHRAAD--LTLVPS-----VAIGKDLEAARVTAANKIRI 152
                  + +W+     + +  ++AAD   TL        +  G D E        KIR+
Sbjct: 220 DWEMSYFRRLWIRFFESLGRLAYQAADRITTLYEGNRERQIEDGADPE--------KIRV 271

Query: 153 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLP 208
              G+D E F P         R +  E + P++  +GR+     ++  +     V  ++P
Sbjct: 272 IPNGIDPERFAPA--------RRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIP 323

Query: 209 EARIAFIG----DGPYREE---------LEKMFTGMPAVFTGMLLGEELSQAYASGDVFV 255
           +A    IG    D  Y EE         LE         FTG    + + +     DV V
Sbjct: 324 DAEGWVIGPTDEDPEYAEECRELVESLGLEDNVK-----FTGF---QNVKEYLPKLDVLV 375

Query: 256 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGKIGYLFNPGDLDDCLSK 312
           + S SE   LV+LEAM++GIPVV    G   ++I    ++  G  G +  P D +     
Sbjct: 376 LTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435

Query: 313 LEPLLYNQELRETMGQAARQEMEKYD 338
           +  LL + ELR  MG+A R+ +E+Y 
Sbjct: 436 ILRLLKDPELRRAMGEAGRKRVERYY 461

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 99.6 bits (249), Expect = 2e-23
 Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 41/291 (14%)

Query: 53  PRIISEVAR----FKPDIIHASSPGIMVFGALI--IAKLLCVPIVMSYHTHVPVYIPRYT 106
           P +++E AR    F+PD++H     +   G  I   A+   +PIV++ H +         
Sbjct: 82  PAVVAEFARLLEDFRPDVVHFHH--LQGLGVSILRAARDRGIPIVLTLHDY--------- 130

Query: 107 FSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF 166
             WL+ P         +  D  + PS  +  D   A    A KI + + G+D +      
Sbjct: 131 --WLICP---RQGLFKKGGDAVIAPSRFL-LDRYVANGLFAEKISVIRNGIDLDRAKRPR 184

Query: 167 RSSEMRWRLSNGEPDKPLIV-HVGRLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREE 223
           R+           P   L    +G+L   K +D L     RLP   I  +  G+G   EE
Sbjct: 185 RAP----------PGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEE 234

Query: 224 LEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVR 281
                 G P V F G    EE+   YA  DV V+PS   E   LV+ EA+++G+PV+   
Sbjct: 235 ESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASD 294

Query: 282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
            GG+ +++   +DG  G LF PGD +D  + LE L+ + +L E +      
Sbjct: 295 IGGMAELV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEP 342

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 98.5 bits (246), Expect = 5e-23
 Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 49/319 (15%)

Query: 44  KVPLSLALS-PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-----VPIVMSYHT- 96
           K PLS  L+  ++   + +FKPD++HA      +F A I A+LL       P++ + H+ 
Sbjct: 59  KNPLSFLLALWKLRKILRQFKPDVVHAH-----MFHANIFARLLRLFLPSPPLICTAHSK 113

Query: 97  ----HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 152
                + +   R T                  +DLT   S        A++   ANK  +
Sbjct: 114 NEGGRLRMLAYRLT---------------DFLSDLTTNVSKEALDYFIASKAFNANKSFV 158

Query: 153 WKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 209
              G+D++ F         R ++ N    + D  +I+ VGRL   K    L +   +L  
Sbjct: 159 VYNGIDTDRFRK---DPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS 215

Query: 210 A----RIAFIGDGPYREELEKMFTGMPAVFTGMLLG--EELSQAYASGDVFVMPSESETL 263
                ++   GDGP R  LE++   +       LLG  ++++  Y + D+FV+ S  E  
Sbjct: 216 DYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGF 275

Query: 264 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL-EPLLYNQEL 322
           GLVV EAM+  +PVV   AGG+ +++     G  G +    D +   +K+ E L  + E 
Sbjct: 276 GLVVAEAMACELPVVATDAGGVREVV-----GDSGLIVPISDPEALANKIDEILKMSGEE 330

Query: 323 RETMGQAARQEMEKYDWRA 341
           R+ +G    + ++K+   +
Sbjct: 331 RDIIGARRERIVKKFSINS 349

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 96.4 bits (240), Expect = 4e-22
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 25/244 (10%)

Query: 124 AADLTLVPSVAIGKD-LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK 182
           AAD  +  S  + +D L+        K+ +   G+D++ + P    + +  R    +  +
Sbjct: 144 AADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRY-GIDRSR 201

Query: 183 PLIVHVGRLGVEKSLDFLKRVMDRLP-EARIAFIGDGP----YREELEKMFTGMPAVFTG 237
           P I+ VGR+  +K +  L   +  +P + ++      P      EE+ +    +    TG
Sbjct: 202 PYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTG 261

Query: 238 ------MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 291
                 ML  EEL +  ++ +VFV PS  E LG+V LEAM+ G PVV    GGIP+++  
Sbjct: 262 IIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVV-- 319

Query: 292 DQDGKIGYLFNPGDLDDC-----LSK-LEPLLYNQELRETMGQAARQE-MEKYDWRA-AT 343
             DG+ G+L  P + D       L+K +  LL + EL + MG A R+   E++ W + A 
Sbjct: 320 -VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAK 378

Query: 344 RTIR 347
           +T+ 
Sbjct: 379 KTVE 382

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 94.2 bits (235), Expect = 2e-21
 Identities = 80/327 (24%), Positives = 118/327 (36%), Gaps = 67/327 (20%)

Query: 44  KVPLSLALSPRIISEVARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVMSYHTHVPVY 101
                L    R+   +   K DI+HA S  P    + A   A+    P V + H      
Sbjct: 59  NPLRILLNVARLRRLIREEKVDIVHARSRAPAWSAYLA---ARRTRPPFVTTVHG----- 110

Query: 102 IPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSES 161
              Y+ ++           + R  D  +  S  I   +        ++IR+  +GVD + 
Sbjct: 111 --FYSVNFRYN------AIMARG-DRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDR 161

Query: 162 FHPRFRSSE---MRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAF 214
           F P     E      R       KP+I+  GRL    G E  ++ L R+    P+  +  
Sbjct: 162 FDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI 221

Query: 215 IGDGP----YREELEKM-----------FTG----MPAVFTGMLLGEELSQAYASGDVFV 255
           +GD      Y  EL ++           F G    MPA             AYA  D+ V
Sbjct: 222 VGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPA-------------AYALADIVV 268

Query: 256 MPS-ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD---LDDCLS 311
             S E E  G   +EA + G PV+    GG  + +   + G+ G L  PGD   L   L 
Sbjct: 269 SASTEPEAFGRTAVEAQAMGRPVIASDHGGARETV---RPGETGLLVPPGDAEALAQALD 325

Query: 312 KLEPLLYNQELRETMGQAARQEMEKYD 338
           ++  LL     R  M   AR  +E   
Sbjct: 326 QILSLLPEG--RAKMFAKARMCVETLF 350

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 91.1 bits (226), Expect = 3e-21
 Identities = 57/152 (37%), Positives = 74/152 (48%), Gaps = 14/152 (9%)

Query: 161 SFHPRFRSSEMRWRLSNGEPD--KPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAF 214
           + H   RS      LS           V VGRL  EK LD L      + +R P+ ++  
Sbjct: 81  TVHGVNRSLLEGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVI 140

Query: 215 IGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASG-DVFVMPSESETLGLVVLE 269
            GDGP RE LE++          +F G L  EEL     +  DVFV+PS  E  GLVVLE
Sbjct: 141 AGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLE 200

Query: 270 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF 301
           AM+ G+PV+    GG P+I+   +DG  G L 
Sbjct: 201 AMACGLPVIATDVGGPPEIV---EDGLTGLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 92.3 bits (230), Expect = 1e-20
 Identities = 89/321 (27%), Positives = 135/321 (42%), Gaps = 39/321 (12%)

Query: 50  ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV-----------MSYHTHV 98
           AL+ R+      ++PDI+HA SP +    AL + + L +P+V           + + T  
Sbjct: 79  ALARRLEEVAREWRPDILHAHSPALNGLAALRVGRRLGIPVVYEIRAFWEDAAVDHGTTR 138

Query: 99  PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD 158
                RY  +  ++   L      R AD        +  DL  AR   A KI +    VD
Sbjct: 139 E-GSLRYRLTRALETYAL------RRADAVTTICEGLRGDL-VARGIPAEKITVIPNAVD 190

Query: 159 SESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA 213
            + F  P  R   +   L  G    P+I  +G     + LD L   + RL    P+AR+ 
Sbjct: 191 LDLFGLPAPRDPALAAEL--GLEGAPVIGFIGSFYAYEGLDLLVAALPRLLRRHPDARLL 248

Query: 214 FIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVV-- 267
            +G GP  E L      +      VFTG +  +E+ + Y+  DV   P     L  +V  
Sbjct: 249 LVGGGPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPMRLTELVTP 308

Query: 268 ---LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE 324
              LEAM+ G  V     GG  ++I   +DG+ G LF  GD     + L  LL N+    
Sbjct: 309 LKPLEAMAQGRLVAASDVGGHRELI---RDGETGVLFPAGDPAALAAALLALLDNRAQWP 365

Query: 325 TMGQAARQEME-KYDWRAATR 344
            +  AAR+ +E + +W A+  
Sbjct: 366 ELRAAARRFVETERNWAASVA 386

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 86.1 bits (214), Expect = 2e-18
 Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 22/182 (12%)

Query: 179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI----GDGPYRE---ELEKMFTGM 231
           +PD PL   VGRL  +K +D L   +  L E     +    GD  Y E   EL   + G 
Sbjct: 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGR 352

Query: 232 PAVFTGMLLGEELS-QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPD-I 288
            AV  G    E L+   YA  D F+MPS  E  GL  + AM  G   + VRA GG+ D +
Sbjct: 353 VAVLIGY--DEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPI-VRATGGLADTV 409

Query: 289 IPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAA 342
           I  ++D     G++F   N   L   L +   L  + E    + + A   M + + W  +
Sbjct: 410 IDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA---MAQDFSWDRS 466

Query: 343 TR 344
            +
Sbjct: 467 AK 468

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 70/225 (31%), Positives = 100/225 (44%), Gaps = 23/225 (10%)

Query: 148 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR----V 203
           ++I +   G D E F P  R++E R RL     D  ++  VGR+   K+ D L R    +
Sbjct: 187 DRIDVVAPGADLERFRPGDRATE-RARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAEL 244

Query: 204 MDRLPEA--RIAFIGDGP----------YREELEKMFTGMPAVFTGMLLGEELSQAYASG 251
           +DR P+   R+  +G GP            E   ++       F      EEL   Y + 
Sbjct: 245 LDRDPDRNLRVIVVG-GPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA 303

Query: 252 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 311
           DV  +PS +E+ GLV +EA + G PVV  R GG+P  +    DG+ G L +  D  D   
Sbjct: 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAV---ADGETGLLVDGHDPADWAD 360

Query: 312 KLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW 356
            L  LL +   R  MG AA +    + W AAT       Y  A+ 
Sbjct: 361 ALARLLDDPRTRIRMGAAAVEHAAGFSW-AATADGLLSSYRDALA 404

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

 Score = 81.1 bits (201), Expect = 6e-17
 Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 185 IVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFT--GMPAVFTGM 238
           I+ V RL  EK LD L     +V+ ++P+A +   G G   E+L+++    G+       
Sbjct: 207 IITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLK 266

Query: 239 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGK 296
               +L + Y    + ++ S+SE  GL ++EA+S G+PV+   V  G   +II   +DG+
Sbjct: 267 GYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGP-SEII---EDGE 322

Query: 297 IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY 337
            GYL   GD++     +  LL + +L +   +AA +  E+Y
Sbjct: 323 NGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 81.6 bits (202), Expect = 6e-17
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 21/178 (11%)

Query: 176 SNGEPDKPL-------IVHVGRLGVEKSLDFLKRVMDRLPEARIAF--IGDGPYREELEK 226
           S    D  L       +V V R  V+  +  L  +    P  +I +  IG GP  + L++
Sbjct: 223 SKPSKDDTLRIVSCSYLVPVKR--VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKE 280

Query: 227 MFTGMP----AVFTGMLLGEELSQAYA--SGDVFVMPSESETLGLVVLEAMSSGIPVVGV 280
           +    P      FTG L   E+ + Y     DVFV  SESE L + ++EAMS GIPV+  
Sbjct: 281 LAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT 340

Query: 281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCL-SKLEPLLYNQELRETMGQAARQEMEKY 337
             GG P+I+    +G  G L +     + L S L   + N+E  +TM + AR++ E+ 
Sbjct: 341 NVGGTPEIV---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEEN 395

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 80.8 bits (200), Expect = 9e-17
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 167 RSSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYR 221
                + R   G   D+ +I+ VGRL   K +D+L    K V+ + P  R+  +GDG Y 
Sbjct: 211 EVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDYS 270

Query: 222 EEL---EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV 278
             L   +K++      FTG L  E+L + Y   DV V+PS  E    V +E M  G+P++
Sbjct: 271 RYLQECKKIW--SKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHGLPLI 328

Query: 279 GVRAGGIPDIIPEDQDG---KIGYLFNPGDLDDCL--SKLEPLLYNQELRETMGQAARQE 333
           G  + G+ ++I +  +G    I    +  +LD      KL  LL + +  + MG+ AR+ 
Sbjct: 329 GTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNARRR 388

Query: 334 MEKY 337
             + 
Sbjct: 389 YLEK 392

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 70/245 (28%), Positives = 104/245 (42%), Gaps = 37/245 (15%)

Query: 63  KPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL 121
           K DI+H   S        L+ AK   V + +  H+H             +    ++ K +
Sbjct: 80  KYDIVHVHGSSASGFI--LLAAKKAGVKVRI-AHSHNTSDSH--DKKKKILKYKVLRKLI 134

Query: 122 HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGE 179
           +R A   L  S   GK L         K ++   G+D E F   F     + R  L   E
Sbjct: 135 NRLATDYLACSEEAGKWLFGKVKN--KKFKVIPNGIDLEKF--IFNEEIRKKRRELGILE 190

Query: 180 PDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM---P 232
            DK +I HVGR   +K+ +FL  +   L    P A++  +GDG   EE++K    +    
Sbjct: 191 -DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLED 249

Query: 233 AVFTGMLLGE-----ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD 287
            V     LG      EL QA    DVF+ PS  E L LV++EA +SG+P +      + D
Sbjct: 250 KVI---FLGVRNDVPELLQAM---DVFLFPSLYEGLPLVLIEAQASGLPCI------LSD 297

Query: 288 IIPED 292
            I ++
Sbjct: 298 TITKE 302

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 69/245 (28%), Positives = 96/245 (39%), Gaps = 39/245 (15%)

Query: 123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM----RWRLSNG 178
             AD  L  S A   +L A     A  +     GVD+  F P   +++     R  L  G
Sbjct: 137 VEADAVLCVSAAWAAELRAEWGIDATVV---PNGVDAARFSPAADAADAALRRRLGLRGG 193

Query: 179 EPDKPLIVHVGRLGVEK---SLDFLK---RVMDRLPEARIAFIGD------GPYREELEK 226
               P ++ VG  G+E    ++D L+    +  R P+A++   G         YR E E 
Sbjct: 194 ----PYVLAVG--GIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEA 247

Query: 227 MFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR 281
               +       V TG +   +L   Y   D F  PS  E  GLVVLEA++SGIPVV   
Sbjct: 248 RAAELGLDPGAVVITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALASGIPVV--- 304

Query: 282 AGGIPDIIP--EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW 339
                DI P  E          +P D D     L   L +   R  +  A  +   +Y W
Sbjct: 305 ---ASDIAPFTEYLGRFDAAWADPSDPDSIADALALAL-DPARRPALLAAGPELAARYTW 360

Query: 340 RAATR 344
            A+ R
Sbjct: 361 DASAR 365

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]

 Score = 75.8 bits (187), Expect = 5e-15
 Identities = 45/152 (29%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 172 RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFT 229
           R  L    P  PL   V RL  +K LD L   +D L E   ++  +G G    ELE+   
Sbjct: 285 RLGLDVDLP-GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTG--DPELEEALR 341

Query: 230 GMPA-----VFTGMLLGEELSQA-YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 283
            + +     V   +   E L+   YA  DV +MPS  E  GL  L AM  G   +    G
Sbjct: 342 ALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETG 401

Query: 284 GIPDII-----PEDQDGKIGYLFNPGDLDDCL 310
           G+ D +        Q    G+LF   + D   
Sbjct: 402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLA 433

Length = 487

>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 30/194 (15%)

Query: 179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGM----P 232
           + D PL   + RL  +K +D L   +  L E   ++  +G G    ELE+    +    P
Sbjct: 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD--PELEEALRELAERYP 345

Query: 233 AVFTGML-LGEELSQ-AYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 289
                ++   E L+   YA  D  +MPS  E  GL  L AM  G +P+V  R GG+ D +
Sbjct: 346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVR-RTGGLADTV 404

Query: 290 ----PEDQDGKIGYLFNPGDLDDCLSKLEP--LLYNQ--ELRETMGQAARQEMEK-YDWR 340
               PE + G  G+LF   D    L+ L     LY Q   L E + + A   M + + W 
Sbjct: 405 VDGDPEAESGT-GFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA---MSQDFSWD 460

Query: 341 AATRTIRNEQYNAA 354
            +      +QY   
Sbjct: 461 KSA-----KQYVEL 469

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 68.8 bits (169), Expect = 7e-13
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 24/170 (14%)

Query: 180 PDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP----YREELEKM 227
           P++P I  V R          +D  ++V +R+P+ ++  +G    D P      EE+ + 
Sbjct: 188 PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEY 247

Query: 228 FTGMPAVFTGMLLGE---ELS--QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 282
             G P +    L      E++  Q  +   V +  S  E  GL V EA+  G PV+    
Sbjct: 248 AEGDPDIHVLTLPPVSDLEVNALQRAS--TVVLQKSIREGFGLTVTEALWKGKPVIAGPV 305

Query: 283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
           GGIP  I   +DG+ G+L +    ++   ++  LL + ELR  MG  AR+
Sbjct: 306 GGIPLQI---EDGETGFLVDTV--EEAAVRILYLLRDPELRRKMGANARE 350

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 65/240 (27%), Positives = 100/240 (41%), Gaps = 48/240 (20%)

Query: 121 LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 176
           L R  DL L  S     DL A R+        KI + + GVD   F PR   +       
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKA------- 218

Query: 177 NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPY---------RE 222
              P  PL I+ V RL  +K L        +L E  +AF    +G GP+         + 
Sbjct: 219 ---PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 223 ELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIP 276
           +LE +   MP    G     E+       DVF++PS      + E + + ++EAM+ GIP
Sbjct: 276 QLEDVVE-MP----GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIP 330

Query: 277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-YNQELRETMGQAARQEME 335
           VV     GIP+++   +  K G+L    D      +L      + +    + + AR+++E
Sbjct: 331 VVSTLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVE 387

Length = 406

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 38/215 (17%)

Query: 141 AARVT--AAN----KIRIWKK-GVDSESFHP-----RFRSSEMR---WRLSNGEPDKPLI 185
           AARV    AN      RI K  G D+   +P     RF  +E +   + LS         
Sbjct: 151 AARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAEEKEDYY-LS--------- 200

Query: 186 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELS 245
             VGRL   K +D      ++L + R+  IGDGP  + L     G    F G +  EEL 
Sbjct: 201 --VGRLVPYKRIDLAIEAFNKLGK-RLVVIGDGPELDRLRAK-AGPNVTFLGRVSDEELR 256

Query: 246 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 305
             YA    F+ P+E E  G+V +EAM+SG PV+    GG  + +    DG  G LF    
Sbjct: 257 DLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETV---IDGVTGILFEE-Q 311

Query: 306 LDDCLSK-LEPLLYNQELRETMGQAARQEMEKYDW 339
             + L+  +E     ++  +   QA R   E++  
Sbjct: 312 TVESLAAAVERF---EKNEDFDPQAIRAHAERFSE 343

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 70/299 (23%), Positives = 111/299 (37%), Gaps = 51/299 (17%)

Query: 61  RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPM-----W 115
           +   D +HA  P I  F  L + +L    +V+  +     +  R  +    K        
Sbjct: 84  KRDIDHVHALGPAIAPF--LPLLRLKGKKVVV--NMDGLEW-KRAKWGRPAKRYLKFGEK 138

Query: 116 LVIKFLHRAADLTLVPSVAIGKDLEAAR----VTAANKIRIWKKGVDSESFHPRFRSSEM 171
           L +KF    AD  +  S  I + L+                   G D         SSE 
Sbjct: 139 LAVKF----ADRLIADSPGIKEYLKEKYGRDSTYIPY-------GADH------VVSSEE 181

Query: 172 RWRLS--NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR-IAFIGD----GPYREEL 224
              L     EP +  ++ VGR+  E ++D L     +    + +  +G+     PY + L
Sbjct: 182 DEILKKYGLEPGRYYLL-VGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLL 240

Query: 225 EKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRA 282
           ++     P + F G +  +EL +      +F +   S       +LEAM+ G PV+    
Sbjct: 241 KEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLAS-- 298

Query: 283 GGIPDIIPEDQ-DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDW 339
               D     +  G     F  G  DD  S LE L  + E    M +AAR+ + EKY W
Sbjct: 299 ----DNPFNREVLGDKAIYFKVG--DDLASLLEELEADPEEVSAMAKAARERIREKYTW 351

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 62.5 bits (152), Expect = 9e-11
 Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV 188
           +VPS  + K     R+  A+ I I   G   E++    + + +R +L N  PD+ ++++ 
Sbjct: 144 IVPSQFL-KKFYEERLPNAD-ISIVPNGFCLETYQSNPQPN-LRQQL-NISPDETVLLYA 199

Query: 189 GRLGVEKSLDFLKRVMDRLPEAR----IAFIGD---------GPYREELEKMFT--GMPA 233
           GR+  +K +  L +  ++L  A     +  +GD           Y++++ +     G   
Sbjct: 200 GRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259

Query: 234 VFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 292
           +  G    E++   Y   D+ V+PS+  E   +V +EAM++G PV+    GGI + +   
Sbjct: 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFV--- 316

Query: 293 QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY 351
            +G  GY L  P   D  +S +   L + EL +   QA      KY W   T+    + +
Sbjct: 317 LEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIH 376

Query: 352 NAAIWF 357
           N   WF
Sbjct: 377 N---WF 379

Length = 380

>gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 41/220 (18%)

Query: 156 GVDSESFHPRFRSSEMRWRLSNG------EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 209
           GVD   F+P   S E    + N       +P+KP I+ + R    K++  L     R P+
Sbjct: 217 GVDLSRFYPPQSSEETS-EIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPK 275

Query: 210 AR-----IAFIGDGPYREELEKMFTGMPAVFTGMLL------------------GEELSQ 246
            +     +  +G    R+++ KM +    V   +LL                   +++ +
Sbjct: 276 LQEMANLVLVLGC---RDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPE 332

Query: 247 AY----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN 302
            Y     S  +FV P+ +E  GL +LEA + G+P+V    GG  DII   ++   G L +
Sbjct: 333 LYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRN---GLLVD 389

Query: 303 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 341
             DL+   S LE  L +    +   +   + + + Y W A
Sbjct: 390 VLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDA 429

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439

>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional

 Score = 60.9 bits (149), Expect = 3e-10
 Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 26/182 (14%)

Query: 179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFT 236
           + D PL   V RL  +K LD +   +  L E   ++  +G G    ELE+ F  + A + 
Sbjct: 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDP--ELEEAFRALAARYP 336

Query: 237 G---MLLG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD- 287
           G   + +G  E L+ + YA  D+F+MPS  E  GL  L A+  G +P+  VR  GG+ D 
Sbjct: 337 GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPI--VRRTGGLADT 394

Query: 288 IIPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQ--ELRETMGQAARQEMEKYDWR 340
           +I  + +     G++F   N  DL   L +    LY Q    R    QA  Q+   + W 
Sbjct: 395 VIDYNPEDGEATGFVFDDFNAEDLLRALRRAL-ELYRQPPLWRALQRQAMAQD---FSWD 450

Query: 341 AA 342
            +
Sbjct: 451 KS 452

Length = 466

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 57.4 bits (139), Expect = 4e-10
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 33  HIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM 92
            ++  P P    +P  L    R+   + R +PD++HA  P   +   L  A+   VP+V+
Sbjct: 41  RVHRLPVPRRPSLPGDLRALRRLRRLLRRERPDVVHAHGPLAGLLARL-AARRRGVPVVV 99

Query: 93  SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN 148
           + H        R       +    + + L R AD  +  S A  + L A  V AA 
Sbjct: 100 TPHGLA----LRQGSGLKRRLARALERRLLRRADAVVAVSEAEAELLRALGVPAAR 151

Length = 158

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.2 bits (144), Expect = 8e-10
 Identities = 53/255 (20%), Positives = 91/255 (35%), Gaps = 49/255 (19%)

Query: 57  SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL 116
             +A    DI+H  S        L  A+ L VP+V + H      + +            
Sbjct: 81  RALAAGDFDIVHNHSL----HLPLPFARPLPVPVVTTLHGPPDPELLKL----------- 125

Query: 117 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLS 176
                + AA    VP V+I              +     G+D + +  R           
Sbjct: 126 -----YYAARPD-VPFVSISDAQ-RRPWPPLPWVATVHNGIDLDDYPFR----------- 167

Query: 177 NGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIA-FIGDGPYREELEKMF--T 229
            G     L + +GR+    G   ++   +R    L   ++A  + D  Y           
Sbjct: 168 -GPKGDYL-LFLGRISPEKGPHLAIRAARRAGIPL---KLAGPVSDPDYFYREIAPELLD 222

Query: 230 GMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDI 288
           G    + G + G E ++   +    + P    E  GLV++EAM+ G PV+  R G +P++
Sbjct: 223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEV 282

Query: 289 IPEDQDGKIGYLFNP 303
           +    DG  G+L + 
Sbjct: 283 VE---DGVTGFLVDS 294

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
           + + PS  ++  + V EA + G P++  R  G+ ++    ++  + Y     D ++   K
Sbjct: 1   IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEI-VLY----RDPEELAEK 55

Query: 313 LEPLLYNQELRETMGQAARQEMEK---YDWRAAT 343
           L  LL + E R  +  A R+ +     Y+ RA  
Sbjct: 56  LRYLLADPEERRAIAAAGRERVLAEHTYEHRAEQ 89

Length = 92

>gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 38/219 (17%)

Query: 148 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSLDF----- 199
           ++I +   G+D++   P     + R RL NG    P   +I  V R  +E    F     
Sbjct: 177 SRISVIHDGIDTDRLRP---DPQARLRLPNGRVLTPGDEVITFVAR-NLEPYRGFHVFMR 232

Query: 200 -LKRVMDRLPEARIAFIGD------------GPYREELEKMFTGMPAV----FTGMLLGE 242
            L R++   P+AR+  +G               +++ +     G   +    F G +  +
Sbjct: 233 ALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYD 292

Query: 243 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL-- 300
           +        DV V  +    L   +LEAM+ G  VVG     + ++I    DG+ G L  
Sbjct: 293 QYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVI---TDGENGLLVD 349

Query: 301 -FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 338
            F+P  L   + +   LL +   R  + +AAR+   +YD
Sbjct: 350 FFDPDALAAAVIE---LLDDPARRARLRRAARRTALRYD 385

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 12/109 (11%)

Query: 181 DKPLIVHVGRLGVEKSLDFL-----KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVF 235
               I   G       L +L       +   LP+  +  IG GP  EEL ++   +   F
Sbjct: 1   GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGP--EELARLAPNV--HF 56

Query: 236 TGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRAG 283
            G +  E+L+   AS DV + P        L +LEA+++G+PVV    G
Sbjct: 57  LGFV--EDLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIG 103

Length = 134

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 67/240 (27%), Positives = 97/240 (40%), Gaps = 48/240 (20%)

Query: 121 LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 176
           L R  DL L  S     DL A R+ A      KI + + GVD   F  R           
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLKAMGCPPEKIAVSRMGVDMTRFTHR----------P 215

Query: 177 NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPYREELEKM---- 227
              P  PL I+ V RL  +K L        +L    +AF    +G GP+   L  +    
Sbjct: 216 VKAPGTPLEIISVARLTEKKGLHVAIEACRQLKAQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 228 ----FTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIPV 277
                  MP    G     E+       DVF++PS      + E + + ++EAM+ GIPV
Sbjct: 276 QLEDVVEMP----GFKPSHEVKAMLDDADVFLLPSVTGTDGDMEGIPVALMEAMAVGIPV 331

Query: 278 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL--LYNQELRETMGQAARQEME 335
           V     GIP+++   + GK G+L    D      +L     +  Q LR  +   AR+++E
Sbjct: 332 VSTVHSGIPELV---EAGKSGWLVPENDAHALADRLAAFSRIDTQTLRPVL-TRAREKVE 387

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 17/144 (11%)

Query: 157 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARI 212
           VDS  F P           S  + DK  IV + RL   K +D L  ++  +    P  R 
Sbjct: 177 VDSSDFTPD---------PSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRF 227

Query: 213 AFIGDGPYREELEKM---FTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 268
              GDGP R  LE+M   +     V   G +  E +      G +F+  S +E   + ++
Sbjct: 228 IIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIV 287

Query: 269 EAMSSGIPVVGVRAGGIPDIIPED 292
           EA S G+ VV  R GGIP+++P D
Sbjct: 288 EAASCGLLVVSTRVGGIPEVLPPD 311

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase

 Score = 52.8 bits (127), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
           +FV P+  E  GL VLEAM+ G+P    R GG  +II   QDG  G+  +P   ++   K
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII---QDGVSGFHIDPYHGEEAAEK 702

Query: 313 L----EPLLYNQELRETMGQAARQEM-EKYDWR 340
           +    E    +    + + Q   Q + EKY W+
Sbjct: 703 IVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWK 735

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784

>gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYL 300
           E + Q   +    ++ S+ E   + +LEAMS GIP +      G  DII   + G  G L
Sbjct: 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDII---KPGLNGEL 305

Query: 301 FNPGDLDDCLSKL 313
           + PG++D+ + KL
Sbjct: 306 YTPGNIDEFVGKL 318

Length = 359

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 64/314 (20%), Positives = 111/314 (35%), Gaps = 47/314 (14%)

Query: 59  VARFKPDIIHASSP-GIMVFGALIIAKLLC----VPIVMSYHTHVPVYIPRYTFSWLVKP 113
           +    PD++      GI    A +   LL     +P+V++ HT     +           
Sbjct: 72  IRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHT----VLLHEPRPGD--- 124

Query: 114 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSE 170
              +++ L R AD  +V S  + + L           +I          H          
Sbjct: 125 -RALLRLLLRRADAVIVMSSELLRALLLRAYPE----KIAV------IPHGVPDPPAEPP 173

Query: 171 MRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARI----AFIGDGPYRE 222
              +   G   +P+++  G L    G+E  L+ L  ++ + P+ R+        D     
Sbjct: 174 ESLKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYR 233

Query: 223 ELEKMFTGMPAV-----F-TGMLLGEELSQAYASGDVFVMP--SESETLGLVVLEAMSSG 274
                      +     F    L  EEL + +++ DV V+P  S  +T   V+  A+  G
Sbjct: 234 GEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFG 293

Query: 275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM 334
            PV+    G   + + +   G    L  PGD       +  LL + EL + +   AR+  
Sbjct: 294 KPVISTPVGH-AEEVLDGGTG---LLVPPGDPAALAEAIRRLLADPELAQALRARAREYA 349

Query: 335 EKYDW-RAATRTIR 347
               W R A R +R
Sbjct: 350 RAMSWERVAERYLR 363

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|131964 TIGR02918, TIGR02918, accessory Sec system glycosylation protein GtfA

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 185 IVHVGRLGVEKSLDFL-KRVM---DRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLL 240
           I+   RL  EK +D+L K V+     +PE      G+G  +++L+K+     A     L 
Sbjct: 322 IITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLK 381

Query: 241 GE-ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGKI 297
           G   LS+ Y   ++++  S SE  GL ++EA+ SG+ ++G  V  G  P  I   +D K 
Sbjct: 382 GHRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGN-PTFI---EDNKN 437

Query: 298 GYL----FNPGDLDDCLSKL 313
           GYL        D D  ++ L
Sbjct: 438 GYLIPIDEEEDDEDQIITAL 457

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system [Protein fate, Protein modification and repair]. Length = 500

>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 198 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML-LGEELS-----QAYASG 251
           + L   +++L E  I  +  G   +E EK F          + +  E +      A A  
Sbjct: 323 ELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGL 382

Query: 252 DVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPE-DQDGKIGYLFNPGDLDDC 309
           D+ +MP + E+ G++ + AMS G IPV     GGI + I E  +D   G++F+    +  
Sbjct: 383 DMLLMPGKIESCGMLQMFAMSYGTIPVAYA-GGGIVETIEEVSEDKGSGFIFHDYTPEAL 441

Query: 310 LSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYN 352
           ++KL   L      E   +   + ME+ + W+ +      E+Y 
Sbjct: 442 VAKLGEALALYHDEERWEELVLEAMERDFSWKNSA-----EEYA 480

Length = 489

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 64/283 (22%), Positives = 102/283 (36%), Gaps = 65/283 (22%)

Query: 51  LSPRIISEVARFKP-------DIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYI 102
           L  +II    +           ++H    G +   AL  A L  VP IV+S  T  PV  
Sbjct: 381 LPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALA-ALLAGVPRIVLSVRTMPPV-- 437

Query: 103 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF 162
                    +P    +++    ++L  +  VA    L +    AA++   W  GVD    
Sbjct: 438 --------DRPDRYRVEYDIIYSELLKMRGVA----LSSNSQFAAHRYADWL-GVDERRI 484

Query: 163 H---------------------PRFRSSEMRWRLSNG-----EPDKPLIVHVGRLGVEKS 196
                                  +F +     R + G     + +K        L VE +
Sbjct: 485 PVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKR-----PFLWVEAA 539

Query: 197 LDFLKRVMDRLPEARIAFIGDGPYREEL----EKMFTGMPAVFTGMLLGEELSQAYASGD 252
             F        P+ R   +G GP  E +    +++  G   +FTG  L   +       +
Sbjct: 540 QRFAAS----HPKVRFIMVGGGPLLESVREFAQRLGMGERILFTG--LSRRVGYWLTQFN 593

Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG 295
            F++ S  E L  V++EA  SG+PVV   AGG  + + E   G
Sbjct: 594 AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTG 636

Length = 694

>gnl|CDD|185387 PRK15490, PRK15490, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 45.1 bits (106), Expect = 4e-05
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 197 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF 254
           +DF  R +   P  R   +GDG  R E +K    +  +   + +G      Y     +VF
Sbjct: 417 IDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVF 476

Query: 255 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 297
           ++ S  E L  V++EA   G+PV+   AGG  +   E   G I
Sbjct: 477 ILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFI 519

Length = 578

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 259 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY 318
            +E  G+V LEAM +G PV+   +GG  + +    DG+ G+L  P   ++    +  L  
Sbjct: 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLAN 363

Query: 319 NQELRETMGQAARQ 332
           + +L + MG A R+
Sbjct: 364 DPDLADRMGAAGRK 377

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|234105 TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 59/220 (26%), Positives = 84/220 (38%), Gaps = 48/220 (21%)

Query: 141 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKS 196
           A R+TA         GVD++ F P       R   +   P K ++V  G +     ++  
Sbjct: 195 AGRITAFPN------GVDADFFSPD------RDYPNPYPPGKRVLVFTGAMDYWPNIDAV 242

Query: 197 LDFLKRVM----DRLPEARIAFIGDGPYREELEKMFTGMPAVF-TGMLLGEELSQAYASG 251
           + F +RV      R P A    +G  P      +    +P V  TG +   ++    A  
Sbjct: 243 VWFAERVFPAVRARRPAAEFYIVGAKPSPAV--RALAALPGVTVTGSV--ADVRPYLAHA 298

Query: 252 DVFVMPSESETLGLV------VLEAMSSGIPVV--GVRAGGIPDIIPEDQDGKIG-YLFN 302
            V V P     L +       VLEAM+   PVV     A GI        D   G  L  
Sbjct: 299 AVAVAP-----LRIARGIQNKVLEAMAMAKPVVASPEAAEGI--------DALPGAELLV 345

Query: 303 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 341
             D  D  + +  LL N   RE +GQAAR+ + + Y W  
Sbjct: 346 AADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPR 385

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 397

>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVF- 235
           +PD  L+  + RL  +K LD L   +  L    A++A +G G    ELE  F      + 
Sbjct: 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSG--DAELEARFRAAAQAYP 349

Query: 236 --TGMLLGEELSQAY---ASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 289
              G+++G + + A+   A  D  ++PS  E  GL  L A+  G +PVV  R GG+ D +
Sbjct: 350 GQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA-RVGGLADTV 408

Length = 485

>gnl|CDD|222130 pfam13439, Glyco_transf_4, Glycosyltransferase Family 4

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 29  NFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCV 88
                + S P   +++   S A    +   + + + D++H+  P               V
Sbjct: 46  ELGVILVSVPGLSFKRALRSPAFVFALRRLLKKERFDLVHSHHP--------AALLFADV 97

Query: 89  PIVMSYHTHVPVYIPRYTFSWLVKPMWLVI-KFLHRAADLTLVPSVAIGKDLEAARVTAA 147
           P V++ H   P+    Y+     + + L + + L R AD  +  S  +  +L    V   
Sbjct: 98  PAVLTVHGTWPLRFI-YSSLSPYEVLELPLERRLFRRADAVIAVSEEVADELARYGVPEE 156

Query: 148 NKIRIWKKGVDSESFH 163
            KIR+   GVD+E F 
Sbjct: 157 -KIRVIPNGVDTERFR 171

Length = 171

>gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 18/98 (18%)

Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
            FV P+  E  GL V+EAM+ G+P      GG  +II    DG  G+  +P   D+  +K
Sbjct: 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII---VDGVSGFHIDPYHGDEAANK 725

Query: 313 L---------EPLLYNQELRETMGQAARQEM-EKYDWR 340
           +         +P  +N+     +  A  Q + E Y W+
Sbjct: 726 IADFFEKCKEDPSYWNK-----ISDAGLQRIYECYTWK 758

Length = 815

>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 175 LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMP 232
           LS+ +  +PL+  + RL  +K +  ++  + +  E   +   +G  P    +++ F G+ 
Sbjct: 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPV-PHIQREFEGIA 830

Query: 233 AVFTG-----MLL--GEELSQA-YASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG 283
             F       ++L   E LS + YA+ D+F++PS  E  GL  + AM  G +P+V  + G
Sbjct: 831 DQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVR-KTG 889

Query: 284 GIPDIIPEDQDGKI------GYLFNPGDLDDCLSKLE 314
           G+ D + +  D  I      G+ F   D     S LE
Sbjct: 890 GLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALE 926

Length = 977

>gnl|CDD|236670 PRK10307, PRK10307, putative glycosyl transferase; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 28/214 (13%)

Query: 134 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIV-HVGRL- 191
           A  K + A +V        W    +   F P   +     R   G PD   IV + G + 
Sbjct: 186 AREKGVAAEKVIF---FPNW---SEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIG 239

Query: 192 ---GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKM--FTGMPAV-FTGMLLGEELS 245
              G+E  +D  +R+ DR P+      G G  +  LEKM    G+P V F  +   + L 
Sbjct: 240 EKQGLELVIDAARRLRDR-PDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLP 298

Query: 246 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGK----IG 298
                 D  ++P ++    LV    + S +    + A G   +    P  + G+    IG
Sbjct: 299 ALLKMADCHLLPQKAGAADLV----LPSKL--TNMLASGRNVVATAEPGTELGQLVEGIG 352

Query: 299 YLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 332
               P  ++  ++ +  L     LR  +G  AR+
Sbjct: 353 VCVEPESVEALVAAIAALARQALLRPKLGTVARE 386

Length = 412

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	385
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PLN02316	1036	synthase/transferase	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
PHA01633	335	putative glycosyl transferase group 1	99.97
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.97
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.97
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.97
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.96
PLN02605	382	monogalactosyldiacylglycerol synthase	99.96
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.96
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.95
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.95
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.95
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.95
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.94
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.94
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.93
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.93
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.92
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.91
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.9
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.89
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.87
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.87
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.87
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.85
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.85
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.85
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.83
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.79
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.78
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.74
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.73
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.71
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.71
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.68
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.68
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.66
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.66
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.63
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.62
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.56
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.55
TIGR03492	396	conserved hypothetical protein. This protein famil	99.51
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.48
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.39
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.34
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.3
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.29
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.29
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	99.26
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.23
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	99.21
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.19
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.13
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.06
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.06
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.05
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.04
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.96
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.9
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	98.84
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	98.82
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	98.71
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.68
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.62
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.53
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.52
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.44
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.36
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.31
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.27
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.18
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	98.18
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	98.14
PLN02670	472	transferase, transferring glycosyl groups	98.1
PLN02448	459	UDP-glycosyltransferase family protein	97.94
PLN03004	451	UDP-glycosyltransferase	97.93
KOG1050	732	consensus Trehalose-6-phosphate synthase component	97.91
PLN02764	453	glycosyltransferase family protein	97.82
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	97.81
PLN02562	448	UDP-glycosyltransferase	97.8
PLN00164	480	glucosyltransferase; Provisional	97.79
PLN02208	442	glycosyltransferase family protein	97.76
PLN03007	482	UDP-glucosyltransferase family protein	97.71
COG4671	400	Predicted glycosyl transferase [General function p	97.68
PLN02992	481	coniferyl-alcohol glucosyltransferase	97.67
PLN02210	456	UDP-glucosyl transferase	97.67
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.64
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.61
PLN00414	446	glycosyltransferase family protein	97.6
PLN02554	481	UDP-glycosyltransferase family protein	97.58
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	97.51
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.5
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	97.49
PLN02173	449	UDP-glucosyl transferase family protein	97.49
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	97.39
PLN02167	475	UDP-glycosyltransferase family protein	97.34
PLN02207	468	UDP-glycosyltransferase	97.33
PLN02152	455	indole-3-acetate beta-glucosyltransferase	97.28
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	97.27
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.23
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	97.15
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	97.13
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	97.12
PLN03015	470	UDP-glucosyl transferase	97.12
PLN02555	480	limonoid glucosyltransferase	97.0
PLN02534	491	UDP-glycosyltransferase	96.99
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	96.91
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	96.87
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	96.83
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	96.77
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	96.68
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	96.49
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	96.41
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	96.35
PF08288	90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	96.33
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	96.18
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.16
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	96.03
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	96.0
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	95.81
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	95.8
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	95.76
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	95.66
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	95.59
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.46
PRK14986	815	glycogen phosphorylase; Provisional	95.39
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	95.12
PRK14985	798	maltodextrin phosphorylase; Provisional	95.12
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	95.1
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.95
KOG3349	170	consensus Predicted glycosyltransferase [General f	94.94
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	94.64
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	94.28
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	93.59
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	91.68
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	91.23
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	90.13
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	89.71
TIGR03646	144	YtoQ_fam YtoQ family protein. Members of this fami	89.5
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	88.4
PF00852	349	Glyco_transf_10: Glycosyltransferase family 10 (fu	88.24
PF12996	79	DUF3880: DUF based on E. rectale Gene description	87.67
COG5017	161	Uncharacterized conserved protein [Function unknow	87.27
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	87.23
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	86.54
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	85.72
KOG2619	372	consensus Fucosyltransferase [Carbohydrate transpo	82.22
PRK05562	223	precorrin-2 dehydrogenase; Provisional	81.07

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=2.4e-50  Score=375.72  Aligned_cols=343  Identities=81%  Similarity=1.342  Sum_probs=294.6

Q ss_pred             CCCCcccccccccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHH
Q 016648           38 PCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV  117 (385)
Q Consensus        38 ~~~~~~~~~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~  117 (385)
                      +.+.+...+..+....++.+.+++.+||+||+|++....+.++.+++..++|+|++.|++.+.........+..+..+.+
T Consensus       119 ~~~~~~~~~~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~  198 (465)
T PLN02871        119 PCPFYQKVPLSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDI  198 (465)
T ss_pred             CCccCCCceeeccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHH
Confidence            34444444444555568889999999999999987655566666778889999999999766554433333333334456


Q ss_pred             HHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccH
Q 016648          118 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL  197 (385)
Q Consensus       118 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~  197 (385)
                      .+.+.+.+|.++++|+.+.+.+.+.+..+.+++.++|||+|.+.+.+.......+.+.....+++++|+|+|++.+.||+
T Consensus       199 ~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~  278 (465)
T PLN02871        199 IRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNL  278 (465)
T ss_pred             HHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhH
Confidence            67888999999999999999999877555689999999999998876544444444433334467889999999999999


Q ss_pred             HHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          198 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       198 ~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      +.++++++++++++++|+|+|++.+.++++..+.+|+|+|+++++|+..+|+.||++|+||..|++|++++|||+||+||
T Consensus       279 ~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PV  358 (465)
T PLN02871        279 DFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPV  358 (465)
T ss_pred             HHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCE
Confidence            99999999999999999999999999999888889999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCcccccCCC---CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          278 VGVRAGGIPDIIPEDQD---GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       278 I~s~~~~~~e~~~~~~~---~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      |+++.++..|++   .+   +.+|++++++|+++++++|.++++|++.++++++++++.+++|+|+.+++++++..|+++
T Consensus       359 I~s~~gg~~eiv---~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~  435 (465)
T PLN02871        359 VAARAGGIPDII---PPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAA  435 (465)
T ss_pred             EEcCCCCcHhhh---hcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            999999999999   77   899999999999999999999999999999999999999989999999999986689999


Q ss_pred             HHHHHHHhhccCCccchhhcccccCcccc
Q 016648          355 IWFWRKKRAQLLRPIQWLAKRIFPSAEVN  383 (385)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (385)
                      ++..++++.++.++..|.++.++|..+.|
T Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  464 (465)
T PLN02871        436 IWFWRKKRAQLLGPVQWLPAQLFPAPEVN  464 (465)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhcccccccC
Confidence            99999999999999999999999998876

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=4.9e-40  Score=300.01  Aligned_cols=277  Identities=23%  Similarity=0.314  Sum_probs=226.9

Q ss_pred             HHHhhccCCCEEEeCCCchhHHHHHHHHH--HhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcCh
Q 016648           56 ISEVARFKPDIIHASSPGIMVFGALIIAK--LLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  133 (385)
Q Consensus        56 ~~~i~~~~pDiI~~~~~~~~~~~~~~~~~--~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~  133 (385)
                      ...+++.+||+||+|....... +..+++  ..+.|+++++|+..... ..     .........+..++++|.++++|+
T Consensus       111 ~~~~~~~~~diihaH~~~~~~~-~~~~~~~~~~~~~~~~t~Hg~d~~~-~~-----~~~~~~~~~~~~~~~ad~vv~~S~  183 (406)
T PRK15427        111 AQVATPFVADVFIAHFGPAGVT-AAKLRELGVLRGKIATIFHGIDISS-RE-----VLNHYTPEYQQLFRRGDLMLPISD  183 (406)
T ss_pred             hhhhccCCCCEEEEcCChHHHH-HHHHHHhCCCCCCeEEEEccccccc-ch-----hhhhhhHHHHHHHHhCCEEEECCH
Confidence            3455788999999998643322 333333  23457788999853211 00     011122245667899999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CC
Q 016648          134 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE  209 (385)
Q Consensus       134 ~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~  209 (385)
                      ..++.+.+.+ .+.+++.++|||+|.+.|.+....         ...+.+.++++|++.+.||++.++++++.+    ++
T Consensus       184 ~~~~~l~~~g-~~~~ki~vi~nGvd~~~f~~~~~~---------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~  253 (406)
T PRK15427        184 LWAGRLQKMG-CPPEKIAVSRMGVDMTRFSPRPVK---------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVA  253 (406)
T ss_pred             HHHHHHHHcC-CCHHHEEEcCCCCCHHHcCCCccc---------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC
Confidence            9999998764 467899999999999887653211         123557899999999999999999999876    57


Q ss_pred             ceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCC------CCCcHHHHHHHhcCCcEEE
Q 016648          210 ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSES------ETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       210 ~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~------e~~~~~~~Ea~a~G~PvI~  279 (385)
                      +++.|+|+|+..+++++++.+.    +|.+.|+++++++.++|+.||++++||..      ||+|++++|||+||+|||+
T Consensus       254 ~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~  333 (406)
T PRK15427        254 FRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVS  333 (406)
T ss_pred             EEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEE
Confidence            8999999999888888877643    59999999999999999999999999974      9999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~  353 (385)
                      |+.++.+|++   .++.+|++++++|+++++++|.++++ |++.++++++++++.+ ++|+|+..++++. ++|++
T Consensus       334 t~~~g~~E~v---~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~-~~~~~  405 (406)
T PRK15427        334 TLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELA-SLLQA  405 (406)
T ss_pred             eCCCCchhhh---cCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHhh
Confidence            9999999999   88999999999999999999999999 9999999999999998 5699999999997 68875

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=3.2e-39  Score=297.63  Aligned_cols=287  Identities=18%  Similarity=0.239  Sum_probs=234.6

Q ss_pred             cCCCEEEeCCCchh-HHHHHHHHHHhCCCEEEEEecCCCcccccc---cccccchhHHHHHHHHHHhCCeEEEcChhHHH
Q 016648           62 FKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRY---TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  137 (385)
Q Consensus        62 ~~pDiI~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~  137 (385)
                      .+||+||+|.+... ...+..+++..++|+++++||.++......   ......+....+++.+++.+|.++++|+.+.+
T Consensus       105 ~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  184 (412)
T PRK10307        105 WRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMN  184 (412)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHH
Confidence            78999999987543 344556778889999999999765432111   11223334456788899999999999999999


Q ss_pred             HHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh--hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---CCceE
Q 016648          138 DLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PEARI  212 (385)
Q Consensus       138 ~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---~~~~l  212 (385)
                      .+.+.+ .+..++.++|||+|.+.+.+.....  ..+.+.. ..+++++++|+|++.+.||++.++++++.+   +++++
T Consensus       185 ~~~~~~-~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l  262 (412)
T PRK10307        185 KAREKG-VAAEKVIFFPNWSEVARFQPVADADVDALRAQLG-LPDGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIF  262 (412)
T ss_pred             HHHHcC-CCcccEEEECCCcCHhhcCCCCccchHHHHHHcC-CCCCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEE
Confidence            998764 4667899999999988776543221  2223332 234568999999999999999999999876   57999


Q ss_pred             EEEeCCccHHHHHHHHcCC---CeEEecccChHHHHHHHHhCcEEEEcCCCCC----CcHHHHHHHhcCCcEEEecCCCC
Q 016648          213 AFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESET----LGLVVLEAMSSGIPVVGVRAGGI  285 (385)
Q Consensus       213 ~i~G~g~~~~~l~~~~~~~---~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~----~~~~~~Ea~a~G~PvI~s~~~~~  285 (385)
                      +|+|+|+..+++++++...   +|.|.|+++.+++.++|+.||++++|+..|+    +|++++|||+||+|||+|+.++.
T Consensus       263 ~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~  342 (412)
T PRK10307        263 VICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT  342 (412)
T ss_pred             EEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc
Confidence            9999999888888776533   6999999999999999999999999999887    68899999999999999998763


Q ss_pred             --CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHH
Q 016648          286 --PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       286 --~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~-~~s~~~~~~~~~~~iy~~~~~  356 (385)
                        .+++   .  .+|++++++|+++++++|.++++|++.+++|++++++.++ +|||+.+++++. .+|++++.
T Consensus       343 ~~~~~i---~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~~~~~~~  410 (412)
T PRK10307        343 ELGQLV---E--GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAERTLDKENVLRQFI-ADIRGLVA  410 (412)
T ss_pred             hHHHHH---h--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-HHHHHHhc
Confidence              5777   4  5899999999999999999999999999999999999984 699999999997 79998874

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=8.8e-39  Score=291.47  Aligned_cols=293  Identities=25%  Similarity=0.363  Sum_probs=232.9

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCE-EEEEecCCCcccccccccccchhHHHHHHHHHHhCCe
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI-VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  127 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~-v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  127 (385)
                      +....++.+++++.+|||||+|++..  ......++..++|. +.+.|+.....  .....   .....+.+...+.+|.
T Consensus        67 ~~~~~~l~~~l~~~~~Divh~~~~~~--~~~~~~~~~~~~~~~i~~~h~~~~~~--~~~~~---~~~~~~~~~~~~~~~~  139 (374)
T TIGR03088        67 VAVYPQLYRLLRQLRPDIVHTRNLAA--LEAQLPAALAGVPARIHGEHGRDVFD--LDGSN---WKYRWLRRLYRPLIHH  139 (374)
T ss_pred             hHHHHHHHHHHHHhCCCEEEEcchhH--HHHHHHHHhcCCCeEEEeecCccccc--chhhH---HHHHHHHHHHHhcCCe
Confidence            34567899999999999999998532  22334556667775 33334321111  00001   1123345566678999


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      ++++|+...+.+.+.++.+.+++.+++||+|.+.+.+.........+.....+++++++++|++.+.||++.++++++.+
T Consensus       140 ~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l  219 (374)
T TIGR03088       140 YVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALL  219 (374)
T ss_pred             EEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHH
Confidence            99999999999988776677899999999999887654322221222222345678999999999999999999998765


Q ss_pred             ----C----CceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC
Q 016648          208 ----P----EARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  275 (385)
Q Consensus       208 ----~----~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~  275 (385)
                          +    +++++++|+|+..+.+++.+...    ++.+.|+.  +|+..+|+.||++++||..||+|++++|||+||+
T Consensus       220 ~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~  297 (374)
T TIGR03088       220 VRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGL  297 (374)
T ss_pred             HHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC
Confidence                2    68999999998878887776643    47888865  8999999999999999999999999999999999


Q ss_pred             cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 016648          276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       276 PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~  354 (385)
                      |||+|+.++..|++   .++.+|++++++|++++++++.++++|++.+..+++++++.+ ++|||+.+++++. .+|+++
T Consensus       298 Pvv~s~~~g~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~y~~~  373 (374)
T TIGR03088       298 PVIATAVGGNPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYA-GLYDQL  373 (374)
T ss_pred             CEEEcCCCCcHHHh---cCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHh
Confidence            99999999999999   889999999999999999999999999999999999999998 6799999999997 799876

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=2.4e-38  Score=291.63  Aligned_cols=287  Identities=27%  Similarity=0.349  Sum_probs=231.7

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccc--ccccchhHHHHHHHHHHhCCeEEEcChhHHHHH
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT--FSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL  139 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~  139 (385)
                      .+||+||+|.+. ....++.+++..++|+|++.|+..........  ........+..++.+++.+|.++++|+...+.+
T Consensus       100 ~~~Diih~h~~~-~~~~~~~~~~~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~  178 (405)
T TIGR03449       100 GYYDLIHSHYWL-SGQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDL  178 (405)
T ss_pred             CCCCeEEechHH-HHHHHHHHHHhcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHH
Confidence            479999999853 34445566777899999999986422111000  001111233456778999999999999989888


Q ss_pred             HHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CC--ceEE
Q 016648          140 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE--ARIA  213 (385)
Q Consensus       140 ~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~--~~l~  213 (385)
                      ...++.+.+++.+||||+|.+.+.+.. ....+.+... .+++++|+++|++.+.||++.++++++.+    ++  ++++
T Consensus       179 ~~~~~~~~~ki~vi~ngvd~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~  256 (405)
T TIGR03449       179 VRHYDADPDRIDVVAPGADLERFRPGD-RATERARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVI  256 (405)
T ss_pred             HHHcCCChhhEEEECCCcCHHHcCCCc-HHHHHHhcCC-CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEE
Confidence            777666678999999999998876542 2222333322 34678999999999999999999999776    55  8899


Q ss_pred             EEeC----C-ccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC
Q 016648          214 FIGD----G-PYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  284 (385)
Q Consensus       214 i~G~----g-~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~  284 (385)
                      ++|.    | +..+.+++++.+    .+|++.|+++.+++.++|+.||++++||..|++|++++|||++|+|||+++.++
T Consensus       257 ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~  336 (405)
T TIGR03449       257 VVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG  336 (405)
T ss_pred             EEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC
Confidence            9995    3 345566666543    369999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          285 IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       285 ~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ..+++   .++.+|++++++|+++++++|.+++++++.++++++++++.+++|||+.+++++. ++|++++
T Consensus       337 ~~e~i---~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~-~~y~~~~  403 (405)
T TIGR03449       337 LPVAV---ADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSWAATADGLL-SSYRDAL  403 (405)
T ss_pred             cHhhh---ccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHh
Confidence            99999   8899999999999999999999999999999999999999888899999999997 7999876

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=3.3e-38  Score=287.21  Aligned_cols=282  Identities=31%  Similarity=0.449  Sum_probs=233.6

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      .....+..++++.+||+||+|... ....+..+++..|+|++++.|+.....................++.+++.+|.++
T Consensus        69 ~~~~~~~~~~~~~~~dvvh~~~~~-~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii  147 (367)
T cd05844          69 GSAPQLRRLLRRHRPDLVHAHFGF-DGVYALPLARRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFI  147 (367)
T ss_pred             ccccHHHHHHHhhCCCEEEeccCc-hHHHHHHHHHHcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEE
Confidence            334566667899999999999753 3444555678889999999997543222211111112334456777889999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC--
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--  207 (385)
                      ++|+.+++.+.+.+ .+..++.++|||+|.+.+.+..           ...+..+++|+|++...||++.+++++..+  
T Consensus       148 ~~s~~~~~~~~~~~-~~~~~i~vi~~g~d~~~~~~~~-----------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~  215 (367)
T cd05844         148 AVSQFIRDRLLALG-FPPEKVHVHPIGVDTAKFTPAT-----------PARRPPRILFVGRFVEKKGPLLLLEAFARLAR  215 (367)
T ss_pred             ECCHHHHHHHHHcC-CCHHHeEEecCCCCHHhcCCCC-----------CCCCCcEEEEEEeeccccChHHHHHHHHHHHH
Confidence            99999999998874 4667899999999987765431           133567899999999999999999999765  


Q ss_pred             --CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCC------CCCCcHHHHHHHhcCC
Q 016648          208 --PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSE------SETLGLVVLEAMSSGI  275 (385)
Q Consensus       208 --~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~------~e~~~~~~~Ea~a~G~  275 (385)
                        ++++++++|+|+..+++++++.+    .++++.|+++.+++..+|+.||++++||.      .||+|++++|||+||+
T Consensus       216 ~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~  295 (367)
T cd05844         216 RVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV  295 (367)
T ss_pred             hCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC
Confidence              68999999999887878777665    36999999999999999999999999986      5899999999999999


Q ss_pred             cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       276 PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      |||+++.++..+++   .++.+|++++++|+++++++|.++++|++.+++++.++++.+ ++|||+..++++.
T Consensus       296 PvI~s~~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~  365 (367)
T cd05844         296 PVVATRHGGIPEAV---EDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLE  365 (367)
T ss_pred             CEEEeCCCCchhhe---ecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence            99999999999999   889999999999999999999999999999999999999998 5799999999885

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.2e-38  Score=289.35  Aligned_cols=287  Identities=21%  Similarity=0.304  Sum_probs=230.5

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCch-hHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGI-MVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      .....+.+.+++.+|||||+|++.. ....+.++++..++|+|++.|+.++...      ..........+..++++|.+
T Consensus        75 ~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~------~~~~~~~~~~~~~~~~~d~i  148 (398)
T cd03796          75 GTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFAD------ASSIHTNKLLRFSLADVDHV  148 (398)
T ss_pred             hhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccc------hhhHHhhHHHHHhhccCCEE
Confidence            3456777888899999999998643 3344556678889999999998643110      01111233567778999999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  207 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-  207 (385)
                      +++|+...+.+......+.+++.++|||+|.+.+.+....         ..+++++++++|++.+.||++.++++++.+ 
T Consensus       149 i~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~  219 (398)
T cd03796         149 ICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RDNDKITIVVISRLVYRKGIDLLVGIIPEIC  219 (398)
T ss_pred             EEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CCCCceEEEEEeccchhcCHHHHHHHHHHHH
Confidence            9999999887644444467889999999998877654321         234678999999999999999999999754 


Q ss_pred             ---CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe
Q 016648          208 ---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       208 ---~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s  280 (385)
                         ++++++++|+|+..+.+++++.+.    +|.+.|+++.+++..+|+.||++++||..|++|.+++|||+||+|||++
T Consensus       220 ~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s  299 (398)
T cd03796         220 KKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVST  299 (398)
T ss_pred             hhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEEC
Confidence               789999999998777777766543    5999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHH
Q 016648          281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWF  357 (385)
Q Consensus       281 ~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~~  357 (385)
                      +.++.+|++   .++. ++++ +.|.++++++|.+++++......+.+++++.+ ++|||+.+++++. ++|++++..
T Consensus       300 ~~gg~~e~i---~~~~-~~~~-~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~~l~~~  371 (398)
T cd03796         300 RVGGIPEVL---PPDM-ILLA-EPDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTE-KVYDRILQT  371 (398)
T ss_pred             CCCCchhhe---eCCc-eeec-CCCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHhcC
Confidence            999999999   5553 4444 44899999999999998766666778888876 6799999999998 799998853

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=5.7e-38  Score=290.25  Aligned_cols=292  Identities=20%  Similarity=0.273  Sum_probs=219.8

Q ss_pred             HHHHHHhhcc--CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccc-----ccccc---hhH--HHHHHH
Q 016648           53 PRIISEVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT-----FSWLV---KPM--WLVIKF  120 (385)
Q Consensus        53 ~~l~~~i~~~--~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~-----~~~~~---~~~--~~~~~~  120 (385)
                      ..+.+.+++.  +|||||+|++. ..+.+.++++..++|+|++.|+..........     .....   ...  ...++.
T Consensus       102 ~~l~~~~~~~~~~~DvIH~h~~~-~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (439)
T TIGR02472       102 DNLLQHLRQQGHLPDLIHAHYAD-AGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEE  180 (439)
T ss_pred             HHHHHHHHHcCCCCCEEEEcchh-HHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHH
Confidence            4677777654  79999999863 45556667788899999999985322110000     00000   001  124677


Q ss_pred             HHHhCCeEEEcChhHH-HHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChh---hHh--hhcCCCCCCcEEEEEeecccc
Q 016648          121 LHRAADLTLVPSVAIG-KDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE---MRW--RLSNGEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~-~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~---~~~--~~~~~~~~~~~i~~~G~~~~~  194 (385)
                      .++.+|.|+++|.... +.+..+.+.+.+++.+||||+|.+.|.+......   .+.  +.....++.++++++|++.+.
T Consensus       181 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~  260 (439)
T TIGR02472       181 TLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRR  260 (439)
T ss_pred             HHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCccc
Confidence            8999999999986544 3344444456789999999999988866432211   110  111124467799999999999


Q ss_pred             ccHHHHHHHHHhC----CCceEE-EEeCCccHHH-----------HHHHHc----CCCeEEecccChHHHHHHHHhC---
Q 016648          195 KSLDFLKRVMDRL----PEARIA-FIGDGPYREE-----------LEKMFT----GMPAVFTGMLLGEELSQAYASG---  251 (385)
Q Consensus       195 k~~~~l~~a~~~~----~~~~l~-i~G~g~~~~~-----------l~~~~~----~~~i~~~g~~~~~~~~~~~~~a---  251 (385)
                      ||++.+++|++.+    +..+++ ++|+|+..+.           +..++.    ..+|+|.|+++.+++..+|+.|   
T Consensus       261 Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~  340 (439)
T TIGR02472       261 KNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARS  340 (439)
T ss_pred             CCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence            9999999999754    224444 5677654221           222222    2369999999999999999987   


Q ss_pred             -cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHH
Q 016648          252 -DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA  330 (385)
Q Consensus       252 -di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a  330 (385)
                       |++|+||..|++|++++|||+||+|||+|+.++..|++   .++.+|++++++|+++++++|.++++|++.++++++++
T Consensus       341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a  417 (439)
T TIGR02472       341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDII---ANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNG  417 (439)
T ss_pred             CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHh---cCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence             99999999999999999999999999999999999999   88999999999999999999999999999999999999


Q ss_pred             HHHH-HhCCHHHHHHHHHH
Q 016648          331 RQEM-EKYDWRAATRTIRN  348 (385)
Q Consensus       331 ~~~~-~~~s~~~~~~~~~~  348 (385)
                      ++.+ ++|||+.+++++.+
T Consensus       418 ~~~~~~~fsw~~~~~~~~~  436 (439)
T TIGR02472       418 IEGVRRHYSWDAHVEKYLR  436 (439)
T ss_pred             HHHHHHhCCHHHHHHHHHH
Confidence            9987 67999999999974

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-37  Score=282.13  Aligned_cols=303  Identities=43%  Similarity=0.714  Sum_probs=250.7

Q ss_pred             CCCCcccccccccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHH
Q 016648           38 PCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV  117 (385)
Q Consensus        38 ~~~~~~~~~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~  117 (385)
                      +.+..............+.+.+++.+||+||++.+......+..+++..++|++.++|+.++..................
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (364)
T cd03814          58 PLPGYPEIRLALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAY  137 (364)
T ss_pred             ccCcccceEecccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHH
Confidence            33444444455556678888899999999999987665566667778899999999999776544433333334444567


Q ss_pred             HHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccH
Q 016648          118 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL  197 (385)
Q Consensus       118 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~  197 (385)
                      .+.+.+.+|.+++.|+.+.+.+...+   ..++.++++|+|...+.+.........+..  .+++++++++|++...||+
T Consensus       138 ~~~~~~~~d~i~~~s~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~  212 (364)
T cd03814         138 LRWFHNRADRVLVPSPSLADELRARG---FRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNL  212 (364)
T ss_pred             HHHHHHhCCEEEeCCHHHHHHHhccC---CCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCH
Confidence            78889999999999999999665543   358899999999988766544333333332  4467889999999999999


Q ss_pred             HHHHHHHHhCC---CceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC
Q 016648          198 DFLKRVMDRLP---EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  274 (385)
Q Consensus       198 ~~l~~a~~~~~---~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G  274 (385)
                      +.++++++.+.   +++++++|.++..+.++  ....++.+.|+++.+++.++|+.||++++|+..|++|++++|||+||
T Consensus       213 ~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g  290 (364)
T cd03814         213 EALLDADLPLRRRPPVRLVIVGDGPARARLE--ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG  290 (364)
T ss_pred             HHHHHHHHHhhhcCCceEEEEeCCchHHHHh--ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcC
Confidence            99999999884   69999999988777665  23458999999999999999999999999999999999999999999


Q ss_pred             CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 016648          275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  351 (385)
Q Consensus       275 ~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy  351 (385)
                      +|||+++.++..+++   .++.+|+++++.|.++++++|.++++|++.++++++++++.+++|+|+.+++++. .+|
T Consensus       291 ~PvI~~~~~~~~~~i---~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  363 (364)
T cd03814         291 LPVVAPDAGGPADIV---TDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEAERRSWEAFLDNLL-EAY  363 (364)
T ss_pred             CCEEEcCCCCchhhh---cCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhcCHHHHHHHHH-Hhh
Confidence            999999999999999   8889999999999999999999999999999999999999998899999999997 566

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.2e-38  Score=294.41  Aligned_cols=275  Identities=26%  Similarity=0.331  Sum_probs=226.0

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccc----------cccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP----------RYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .++|+||+|+....++.+.++++..|+|+|++.|+.++....          ......+.+.+..+.+..++.||.|+++
T Consensus       172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~  251 (475)
T cd03813         172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL  251 (475)
T ss_pred             CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence            378999999876666777778888999999999997543210          0111122233455677889999999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----  207 (385)
                      |+...+...+.+ .+.+++.+||||+|.+.+.+....        ...++.++++++|++.+.||++.+++|++.+    
T Consensus       252 s~~~~~~~~~~g-~~~~ki~vIpNgid~~~f~~~~~~--------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~  322 (475)
T cd03813         252 YEGNRERQIEDG-ADPEKIRVIPNGIDPERFAPARRA--------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKI  322 (475)
T ss_pred             CHHHHHHHHHcC-CCHHHeEEeCCCcCHHHcCCcccc--------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC
Confidence            999988876654 467899999999999877654321        1234678999999999999999999999754    


Q ss_pred             CCceEEEEeCCcc----HHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 PEARIAFIGDGPY----REELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ~~~~l~i~G~g~~----~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      ++++++|+|.++.    .+++++++.    ..+|+|+|   .+++.++|+.+|++++||..|++|++++|||+||+|||+
T Consensus       323 p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVa  399 (475)
T cd03813         323 PDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVA  399 (475)
T ss_pred             CCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEE
Confidence            7899999998742    344555554    24799999   488999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCC------CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQD------GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  352 (385)
Q Consensus       280 s~~~~~~e~~~~~~~------~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~-~~s~~~~~~~~~~~iy~  352 (385)
                      |+.++..+++   .+      |.+|+++++.|+++++++|.++++|++.++++++++++.++ .|+|+.+++++. .+|+
T Consensus       400 td~g~~~elv---~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~-~lY~  475 (475)
T cd03813         400 TDVGSCRELI---EGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYR-RLYL  475 (475)
T ss_pred             CCCCChHHHh---cCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            9999999999   55      56999999999999999999999999999999999999985 599999999997 6874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=2.7e-37  Score=283.26  Aligned_cols=288  Identities=25%  Similarity=0.408  Sum_probs=229.5

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccc-cccccchhHHHHHHHHHHhCCeEEEcChhHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY-TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL  139 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~  139 (385)
                      ..+||+||+|++.. .+.+.+.++..++|+|++.|+..+...... ..........+.++..++.+|.++++|+.+++.+
T Consensus        81 ~~~~divh~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~  159 (388)
T TIGR02149        81 PVDADVVHSHTWYT-FLAGHLAKKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDI  159 (388)
T ss_pred             CCCCCeEeecchhh-hhHHHHHHHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHH
Confidence            34799999998633 344455667789999999999765321110 0111122344567888999999999999999999


Q ss_pred             HHhc-ccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-CCceEEEEeC
Q 016648          140 EAAR-VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-PEARIAFIGD  217 (385)
Q Consensus       140 ~~~~-~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-~~~~l~i~G~  217 (385)
                      .+.+ +.+..++.++|||+|.+.+.+.. ....+.+... +++.++++|+|++.+.||++.++++++++ ++.+++++|+
T Consensus       160 ~~~~~~~~~~~i~vi~ng~~~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~i~g~  237 (388)
T TIGR02149       160 LKYYPDLDPEKVHVIYNGIDTKEYKPDD-GNVVLDRYGI-DRSRPYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAG  237 (388)
T ss_pred             HHHcCCCCcceEEEecCCCChhhcCCCc-hHHHHHHhCC-CCCceEEEEEcccccccCHHHHHHHHHHHhhcCcEEEEeC
Confidence            8876 44567899999999998776542 2223333332 45677899999999999999999999988 5789999887


Q ss_pred             CccH----HHHHHHHcC-----CCeEE-ecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCc
Q 016648          218 GPYR----EELEKMFTG-----MPAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  287 (385)
Q Consensus       218 g~~~----~~l~~~~~~-----~~i~~-~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e  287 (385)
                      |+..    +.+++...+     .++.+ .|.++.+++..+|+.||++|+||..|++|++++|||+||+|||+++.++..|
T Consensus       238 g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e  317 (388)
T TIGR02149       238 APDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPE  317 (388)
T ss_pred             CCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHH
Confidence            6543    334443322     23665 4679999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCeeEeeCCCCH------HHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 016648          288 IIPEDQDGKIGYLFNPGDL------DDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       288 ~~~~~~~~~~g~~~~~~~~------~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ++   .++.+|++++++|.      ++++++|.++++|++.++++++++++.+ ++|||+.+++++. .+|++++
T Consensus       318 ~i---~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~-~~y~~~~  388 (388)
T TIGR02149       318 VV---VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTV-EMYRKVL  388 (388)
T ss_pred             Hh---hCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHhhC
Confidence            99   88899999999988      9999999999999999999999999987 6799999999997 7998763

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.9e-37  Score=280.57  Aligned_cols=289  Identities=24%  Similarity=0.442  Sum_probs=233.5

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHH---hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCe
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKL---LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  127 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  127 (385)
                      ....+.+.+++.+||+||+|.+........+..+.   .++|+++++|+........      ...+....+..++.+|.
T Consensus        72 ~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~------~~~~~~~~~~~~~~~d~  145 (371)
T cd04962          72 LASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQ------DPSFQPATRFSIEKSDG  145 (371)
T ss_pred             HHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccc------cccchHHHHHHHhhCCE
Confidence            35678888999999999999764333333333332   3899999999743211100      11223366778899999


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      ++++|+.+.+.+.+.+. ...++.++|||+|...+.+... ...+.+.. ..+++.+++++|++.+.||++.++++++.+
T Consensus       146 ii~~s~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~~-~~~~~~~~-~~~~~~~il~~g~l~~~K~~~~li~a~~~l  222 (371)
T cd04962         146 VTAVSESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKPD-EALKRRLG-APEGEKVLIHISNFRPVKRIDDVIRIFAKV  222 (371)
T ss_pred             EEEcCHHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCch-HHHHHhcC-CCCCCeEEEEecccccccCHHHHHHHHHHH
Confidence            99999999999987764 4678999999999876654322 12222222 245678899999999999999999999776


Q ss_pred             ---CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe
Q 016648          208 ---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       208 ---~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s  280 (385)
                         .+++++++|.|+..+.+++.+.+.    ++.+.|+.  +++.++|+.||++++||..|++|++++|||++|+|||+|
T Consensus       223 ~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s  300 (371)
T cd04962         223 RKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVAS  300 (371)
T ss_pred             HhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEe
Confidence               468999999998887777766543    59999987  689999999999999999999999999999999999999


Q ss_pred             cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 016648          281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       281 ~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~  354 (385)
                      +.++..|++   .++.+|++++++|++++++++..+++|++.+.++++++++.+ ++|||+.+++++. .+|+++
T Consensus       301 ~~~~~~e~i---~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~~~  371 (371)
T cd04962         301 NAGGIPEVV---KHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYE-ALYRRL  371 (371)
T ss_pred             CCCCchhhh---cCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHhC
Confidence            999999999   889999999999999999999999999999999999999996 6799999999997 688763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=2.7e-37  Score=287.47  Aligned_cols=295  Identities=20%  Similarity=0.283  Sum_probs=220.3

Q ss_pred             HHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHH-----hCCCEEEEEecCCCccccc------ccc---cccchh----
Q 016648           54 RIISEVAR--FKPDIIHASSPGIMVFGALIIAKL-----LCVPIVMSYHTHVPVYIPR------YTF---SWLVKP----  113 (385)
Q Consensus        54 ~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~~~~~------~~~---~~~~~~----  113 (385)
                      .+...+++  .+|||||+|++... +.+..+++.     .++|+|+|+|+........      ...   .+....    
T Consensus       107 ~~~~~~~~~~~~pDiiH~h~w~~~-~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  185 (466)
T PRK00654        107 AAAEFAEGLDPRPDIVHAHDWHTG-LIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFY  185 (466)
T ss_pred             HHHHHHHhcCCCCceEEECCcHHH-HHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcC
Confidence            34445543  48999999997543 334444433     3799999999964321100      000   000000    


Q ss_pred             -HHHHHHHHHHhCCeEEEcChhHHHHHHHh-c--------ccCCCcEEEeeCCCCCCCCCCCCCC---------------
Q 016648          114 -MWLVIKFLHRAADLTLVPSVAIGKDLEAA-R--------VTAANKIRIWKKGVDSESFHPRFRS---------------  168 (385)
Q Consensus       114 -~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~--------~~~~~~i~vi~~~v~~~~~~~~~~~---------------  168 (385)
                       ...+.+..++.||.|+++|+.+++.+... +        ..+.+++.+|+||+|.+.|.|....               
T Consensus       186 ~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~  265 (466)
T PRK00654        186 GQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKA  265 (466)
T ss_pred             CcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchH
Confidence             01245667899999999999999888652 1        2346789999999999988765321               


Q ss_pred             ---hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcCC--CeEE-ecc
Q 016648          169 ---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVF-TGM  238 (385)
Q Consensus       169 ---~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~~--~i~~-~g~  238 (385)
                         ...+.+.....++.++++++||+.+.||++.++++++++  .+++++|+|+|+  ..+.++++..+.  ++.+ .|+
T Consensus       266 ~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~  345 (466)
T PRK00654        266 ENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY  345 (466)
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC
Confidence               122333333334678999999999999999999999877  479999999875  345666666543  4554 555


Q ss_pred             cChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC------CeeEeeCCCCHHHHHHH
Q 016648          239 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG------KIGYLFNPGDLDDCLSK  312 (385)
Q Consensus       239 ~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~------~~g~~~~~~~~~~l~~~  312 (385)
                       +.+.+..+|+.||++|+||..|++|++++|||+||+|+|+++.++..|.+   .++      .+|++++++|+++++++
T Consensus       346 -~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v---~~~~~~~~~~~G~lv~~~d~~~la~~  421 (466)
T PRK00654        346 -DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTV---IDYNPEDGEATGFVFDDFNAEDLLRA  421 (466)
T ss_pred             -CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCcccee---ecCCCCCCCCceEEeCCCCHHHHHHH
Confidence             55667899999999999999999999999999999999999999999999   666      89999999999999999


Q ss_pred             HhHhhc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          313 LEPLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       313 i~~ll~---~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      |.++++   +++.+.++++++.+  ++|||+.+++++. ++|+++++
T Consensus       422 i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~lY~~~~~  465 (466)
T PRK00654        422 LRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYL-ELYRRLLG  465 (466)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHHHHHhh
Confidence            999876   66667777776643  5799999999997 79998864

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.2e-36  Score=288.68  Aligned_cols=301  Identities=19%  Similarity=0.239  Sum_probs=225.7

Q ss_pred             HHHHHhhc--cCCCEEEeCCCchhHHHHHHHHH-----HhCCCEEEEEecCCCccc-ccccc-------ccc--------
Q 016648           54 RIISEVAR--FKPDIIHASSPGIMVFGALIIAK-----LLCVPIVMSYHTHVPVYI-PRYTF-------SWL--------  110 (385)
Q Consensus        54 ~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~-----~~~~p~v~~~h~~~~~~~-~~~~~-------~~~--------  110 (385)
                      ....++.+  .+|||||+|+|....++.++...     ..++|+|+|+|+...... +....       ..+        
T Consensus       599 AaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~  678 (977)
T PLN02939        599 AALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQD  678 (977)
T ss_pred             HHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhh
Confidence            34455554  69999999999765543333321     245789999999643221 10000       000        


Q ss_pred             -chhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc--------ccCCCcEEEeeCCCCCCCCCCCCC--------------
Q 016648          111 -VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR--------VTAANKIRIWKKGVDSESFHPRFR--------------  167 (385)
Q Consensus       111 -~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~--------~~~~~~i~vi~~~v~~~~~~~~~~--------------  167 (385)
                       ..-.-.+.+..+..||.|+++|+..++.+...+        .....++.+|+||+|.+.|.|...              
T Consensus       679 ~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~G  758 (977)
T PLN02939        679 NAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQG  758 (977)
T ss_pred             ccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhh
Confidence             000112345556679999999999999987632        235678999999999999887643              


Q ss_pred             ----ChhhHhhhcCCC--CCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCccH---HHHHHHHcC----CC
Q 016648          168 ----SSEMRWRLSNGE--PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYR---EELEKMFTG----MP  232 (385)
Q Consensus       168 ----~~~~~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~~~---~~l~~~~~~----~~  232 (385)
                          ....+.++....  ++.++|+++||+.+.||++.+++|+..+  ++++++|+|+|+..   +.++.+...    .+
T Consensus       759 K~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~dr  838 (977)
T PLN02939        759 KAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNN  838 (977)
T ss_pred             hhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCe
Confidence                123344444332  3568999999999999999999999776  57899999998653   445555443    36


Q ss_pred             eEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC------CCCCeeEeeCCCCH
Q 016648          233 AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED------QDGKIGYLFNPGDL  306 (385)
Q Consensus       233 i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~------~~~~~g~~~~~~~~  306 (385)
                      |.|.|..+......+|+.||++|+||.+|++|++++|||+||+|+|++++||..+.+.+.      .++.+|+++++.|+
T Consensus       839 V~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~  918 (977)
T PLN02939        839 IRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDE  918 (977)
T ss_pred             EEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCH
Confidence            999999987778899999999999999999999999999999999999999999988221      12579999999999


Q ss_pred             HHHHHHHhHhhc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 016648          307 DDCLSKLEPLLY----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  357 (385)
Q Consensus       307 ~~l~~~i~~ll~----~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~  357 (385)
                      ++++++|.++++    |++.++.+++++.  .+.|||+.+++++. .+|++++..
T Consensus       919 eaLa~AL~rAL~~~~~dpe~~~~L~~~am--~~dFSWe~~A~qYe-eLY~~ll~~  970 (977)
T PLN02939        919 QGLNSALERAFNYYKRKPEVWKQLVQKDM--NIDFSWDSSASQYE-ELYQRAVAR  970 (977)
T ss_pred             HHHHHHHHHHHHHhccCHHHHHHHHHHHH--HhcCCHHHHHHHHH-HHHHHHHHh
Confidence            999999998775    7888888887654  25799999999997 799999864

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=3.7e-37  Score=285.46  Aligned_cols=288  Identities=22%  Similarity=0.296  Sum_probs=218.0

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHH-HhCCCEEEEEecCCCcc-cccccc-------cccc-hh-----HHHHHHHHHHhC
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAK-LLCVPIVMSYHTHVPVY-IPRYTF-------SWLV-KP-----MWLVIKFLHRAA  125 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~-~~~~~~-------~~~~-~~-----~~~~~~~~~~~a  125 (385)
                      +.+|||||+|++.....+.++..+ ..++|+|+|+|+..... .+....       .... ..     ...+.+..++.|
T Consensus       131 ~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~a  210 (485)
T PRK14099        131 GFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLA  210 (485)
T ss_pred             CCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhc
Confidence            579999999998554443333211 24679999999964221 110000       0000 00     012467788999


Q ss_pred             CeEEEcChhHHHHHHHhc---------ccCCCcEEEeeCCCCCCCCCCCCCC------------------hhhHhhhcCC
Q 016648          126 DLTLVPSVAIGKDLEAAR---------VTAANKIRIWKKGVDSESFHPRFRS------------------SEMRWRLSNG  178 (385)
Q Consensus       126 d~ii~~s~~~~~~~~~~~---------~~~~~~i~vi~~~v~~~~~~~~~~~------------------~~~~~~~~~~  178 (385)
                      |.|+++|+..++.+.+..         ..+.+++.+|+||+|.+.|.|....                  ...+++....
T Consensus       211 d~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~  290 (485)
T PRK14099        211 DRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLD  290 (485)
T ss_pred             CeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCC
Confidence            999999999999987531         1246789999999999988775432                  1223333332


Q ss_pred             C-CCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcCC--Ce-EEecccChHHHHHHH-H
Q 016648          179 E-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PA-VFTGMLLGEELSQAY-A  249 (385)
Q Consensus       179 ~-~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~~--~i-~~~g~~~~~~~~~~~-~  249 (385)
                      . ++.++++++||+.+.||++.+++|+..+  .+++++|+|+|+  ..+.++++..+.  ++ .+.|+  ++++..+| +
T Consensus       291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~a  368 (485)
T PRK14099        291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQA  368 (485)
T ss_pred             cccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHh
Confidence            2 3567899999999999999999999876  479999999886  355666665432  44 68898  48898887 5


Q ss_pred             hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC---------CeeEeeCCCCHHHHHHHHhH---hh
Q 016648          250 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEP---LL  317 (385)
Q Consensus       250 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~---------~~g~~~~~~~~~~l~~~i~~---ll  317 (385)
                      .||++++||..|++|++.+|||+||+|+|+++.|+..|.+   .++         .+|+++++.|+++++++|.+   ++
T Consensus       369 ~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V---~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~  445 (485)
T PRK14099        369 GADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV---VDANEMAIATGVATGVQFSPVTADALAAALRKTAALF  445 (485)
T ss_pred             cCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCcccee---ecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHh
Confidence            7999999999999999999999999988889999999988   443         68999999999999999997   67


Q ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          318 YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       318 ~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      +|++.+++++++++  .++|||++.++++. ++|+++++
T Consensus       446 ~d~~~~~~l~~~~~--~~~fSw~~~a~~y~-~lY~~l~~  481 (485)
T PRK14099        446 ADPVAWRRLQRNGM--TTDVSWRNPAQHYA-ALYRSLVA  481 (485)
T ss_pred             cCHHHHHHHHHHhh--hhcCChHHHHHHHH-HHHHHHHh
Confidence            79999999998886  36799999999997 79999975

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=6.9e-37  Score=294.67  Aligned_cols=287  Identities=17%  Similarity=0.234  Sum_probs=224.6

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccc---cc------cc--ccchhHHHHHHHHHHhCCeEEEc
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR---YT------FS--WLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~---~~------~~--~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .||+||+|.+ ..+.++..+++..++|+|+|.|.........   ..      ..  +........++.++..||.||++
T Consensus       310 ~pDvIHaHyw-~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas  388 (1050)
T TIGR02468       310 WPYVIHGHYA-DAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS  388 (1050)
T ss_pred             CCCEEEECcc-hHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence            4999999986 4566677788999999999999853221100   00      00  00011223578899999999999


Q ss_pred             ChhHHHHHHHhcc-c---------------------CCCcEEEeeCCCCCCCCCCCCCChh-------------------
Q 016648          132 SVAIGKDLEAARV-T---------------------AANKIRIWKKGVDSESFHPRFRSSE-------------------  170 (385)
Q Consensus       132 s~~~~~~~~~~~~-~---------------------~~~~i~vi~~~v~~~~~~~~~~~~~-------------------  170 (385)
                      |....+.+...|. .                     ...++.|||||+|.+.|.|......                   
T Consensus       389 T~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~  468 (1050)
T TIGR02468       389 TRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWS  468 (1050)
T ss_pred             CHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhH
Confidence            9999987555542 1                     1248999999999999877432111                   


Q ss_pred             hHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC------CceEEEEeCCccH-----------HHHHHHHcC---
Q 016648          171 MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP------EARIAFIGDGPYR-----------EELEKMFTG---  230 (385)
Q Consensus       171 ~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~------~~~l~i~G~g~~~-----------~~l~~~~~~---  230 (385)
                      ...+. ...+++++|+++||+.+.||++.+++|+..++      ++. +|+|.++..           ..+..++.+   
T Consensus       469 ~l~r~-~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL  546 (1050)
T TIGR02468       469 EIMRF-FTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDL  546 (1050)
T ss_pred             HHHhh-cccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCC
Confidence            01111 12457789999999999999999999998763      333 467865432           234444443   


Q ss_pred             -CCeEEecccChHHHHHHHHhC----cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCC
Q 016648          231 -MPAVFTGMLLGEELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD  305 (385)
Q Consensus       231 -~~i~~~g~~~~~~~~~~~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~  305 (385)
                       .+|.|.|+++.++++.+|+.|    |++|+||..|+||++++||||||+|||+|+.++..|++   .++.+|+++++.|
T Consensus       547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII---~~g~nGlLVdP~D  623 (1050)
T TIGR02468       547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH---RVLDNGLLVDPHD  623 (1050)
T ss_pred             CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHh---ccCCcEEEECCCC
Confidence             359999999999999999988    69999999999999999999999999999999999999   8899999999999


Q ss_pred             HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          306 LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       306 ~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      +++|+++|.++++|++.++++++++++.+++|+|+.++++++ ..+..+..
T Consensus       624 ~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl-~~i~~~~~  673 (1050)
T TIGR02468       624 QQAIADALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYL-SRIASCRP  673 (1050)
T ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHhc
Confidence            999999999999999999999999999998899999999998 57777763

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=8.5e-37  Score=283.34  Aligned_cols=298  Identities=18%  Similarity=0.257  Sum_probs=223.4

Q ss_pred             HHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHH-------hCCCEEEEEecCCCccccc-ccc---------cccch--
Q 016648           54 RIISEVAR--FKPDIIHASSPGIMVFGALIIAKL-------LCVPIVMSYHTHVPVYIPR-YTF---------SWLVK--  112 (385)
Q Consensus        54 ~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~-~~~---------~~~~~--  112 (385)
                      ...+.+++  .+|||||+|++.....+. .+++.       .++|+|+|+|+........ ...         .....  
T Consensus       130 a~l~~~~~~~~~pDiiH~hdw~t~l~~~-~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~  208 (489)
T PRK14098        130 GVLETLQRLGWKPDIIHCHDWYAGLVPL-LLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREG  208 (489)
T ss_pred             HHHHHHHhcCCCCCEEEecCcHHHHHHH-HHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcC
Confidence            34455544  589999999975544433 33332       3799999999964321100 000         00000  


Q ss_pred             hHHHHHHHHHHhCCeEEEcChhHHHHHHHh----ccc------CCCcEEEeeCCCCCCCCCCCCCCh-------------
Q 016648          113 PMWLVIKFLHRAADLTLVPSVAIGKDLEAA----RVT------AANKIRIWKKGVDSESFHPRFRSS-------------  169 (385)
Q Consensus       113 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~----~~~------~~~~i~vi~~~v~~~~~~~~~~~~-------------  169 (385)
                      ....+.+..+..||.|+++|+..++.+...    ++.      ...++.+|+||+|.+.|.|.....             
T Consensus       209 ~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k  288 (489)
T PRK14098        209 DEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGK  288 (489)
T ss_pred             CcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhH
Confidence            012355678899999999999999998752    122      257899999999999888754321             


Q ss_pred             -----hhHhhhcCC-CCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCcc--HHHHHHHHcC--CCeEEec
Q 016648          170 -----EMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFTG--MPAVFTG  237 (385)
Q Consensus       170 -----~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~~--~~~l~~~~~~--~~i~~~g  237 (385)
                           ..+.++... .++.++++++|++.+.||++.+++|+.++  ++++++|+|+|+.  .+.+++++.+  .+|.+.|
T Consensus       289 ~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g  368 (489)
T PRK14098        289 LENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQT  368 (489)
T ss_pred             HHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence                 112222222 23578999999999999999999999887  5799999998873  4667766654  3699999


Q ss_pred             ccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCccccc-CCCCCeeEeeCCCCHHHHHHHHhHh
Q 016648          238 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE-DQDGKIGYLFNPGDLDDCLSKLEPL  316 (385)
Q Consensus       238 ~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~-~~~~~~g~~~~~~~~~~l~~~i~~l  316 (385)
                      .++.+++..+|+.||++++||..|++|++.+|||+||+|+|+++.|+..|.+.+ ..++.+|+++++.|+++++++|.++
T Consensus       369 ~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~  448 (489)
T PRK14098        369 EFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEA  448 (489)
T ss_pred             ecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999888721 1136799999999999999999986


Q ss_pred             h---cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          317 L---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       317 l---~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      +   +|++.++++++++.  .++|||+..++++. ++|++++
T Consensus       449 l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~y~-~lY~~~~  487 (489)
T PRK14098        449 LALYHDEERWEELVLEAM--ERDFSWKNSAEEYA-QLYRELL  487 (489)
T ss_pred             HHHHcCHHHHHHHHHHHh--cCCCChHHHHHHHH-HHHHHHh
Confidence            5   57777777766553  25799999999997 7999886

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=9.3e-37  Score=275.97  Aligned_cols=291  Identities=18%  Similarity=0.204  Sum_probs=221.5

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEE-EecCCCcccccccccccchhHHHHHH--HHHHhCCe
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMS-YHTHVPVYIPRYTFSWLVKPMWLVIK--FLHRAADL  127 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~-~h~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ad~  127 (385)
                      ....+..++++.+|||||+|......+ +.+.++..++|++++ .|+..+..    ........+....+  .+...+| 
T Consensus       268 ~~~~l~~~ir~~rpDIVHt~~~~a~l~-g~laA~lagvpviv~~~h~~~~~~----~~r~~~~e~~~~~~a~~i~~~sd-  341 (578)
T PRK15490        268 GIKHLVPHLCERKLDYLSVWQDGACLM-IALAALIAGVPRIQLGLRGLPPVV----RKRLFKPEYEPLYQALAVVPGVD-  341 (578)
T ss_pred             HHHHHHHHHHHcCCCEEEEcCcccHHH-HHHHHHhcCCCEEEEeecccCCcc----hhhHHHHHHHHhhhhceeEecch-
Confidence            366888999999999999998754333 455677789999764 55522211    11111000000111  1234445 


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh-hhHhhhcC-CCCCCcEEEEEeeccccccHHHHHHHHH
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-EMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMD  205 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~a~~  205 (385)
                      +++.|...++.+.+.++.+.+++.+||||+|...|.+..... ..+.+... .+++.++++++|++...||...+++++.
T Consensus       342 ~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a  421 (578)
T PRK15490        342 FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAA  421 (578)
T ss_pred             hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHH
Confidence            667888888888888777889999999999998776643221 11111111 1345678999999999999999998876


Q ss_pred             hC----CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          206 RL----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       206 ~~----~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      ++    ++++++|+|+|+..+++++++.+    .+|+|.|+.  +++..+|+.+|++|+||..|++|++++|||+||+||
T Consensus       422 ~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~--~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPV  499 (578)
T PRK15490        422 RYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGAS--RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPV  499 (578)
T ss_pred             HHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCCh--hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCE
Confidence            53    78999999999988888877654    369999996  799999999999999999999999999999999999


Q ss_pred             EEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHH---hHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 016648          278 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL---EPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       278 I~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i---~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~  353 (385)
                      |+|+.++..|++   .++.+|++++++|++++++++   ..+.++.+....+++++++.+ ++|||+.+++++. .+|.+
T Consensus       500 VATdvGG~~EiV---~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~-ki~~~  575 (578)
T PRK15490        500 ISTPAGGSAECF---IEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFV-KTIAS  575 (578)
T ss_pred             EEeCCCCcHHHc---ccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHh
Confidence            999999999999   899999999999998888876   444555555667889999998 5699999999997 57754

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=1.4e-36  Score=287.58  Aligned_cols=292  Identities=18%  Similarity=0.199  Sum_probs=222.2

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEE-EEecCCCcccccccccccchhHHHHHHHH-HHhCCe
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM-SYHTHVPVYIPRYTFSWLVKPMWLVIKFL-HRAADL  127 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~-~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~  127 (385)
                      ...+++.+++++.+|||||+|......+ +.+.++..++|+|+ +.|+..+.....    ..........+.+ ...++.
T Consensus       387 ~~~~~L~~~lk~~kpDIVH~h~~~a~~l-g~lAa~~~gvPvIv~t~h~~~~~~~~~----~~~~~~~~l~~~l~~~~~~i  461 (694)
T PRK15179        387 EGTTKLTDVMRSSVPSVVHIWQDGSIFA-CALAALLAGVPRIVLSVRTMPPVDRPD----RYRVEYDIIYSELLKMRGVA  461 (694)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCcHHHH-HHHHHHHcCCCEEEEEeCCCccccchh----HHHHHHHHHHHHHHhcCCeE
Confidence            3467899999999999999998754433 44566778999876 456543221111    1111111122222 123456


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcC-CCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      +++.|+..++.+.+.++.+.+++.+||||+|...+.+.........+... .+++.++|+++|++.+.||++.+++++.+
T Consensus       462 ~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~  541 (694)
T PRK15179        462 LSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQR  541 (694)
T ss_pred             EEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHH
Confidence            67777777887877666678899999999998877543222111111111 13356789999999999999999999975


Q ss_pred             C----CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          207 L----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       207 ~----~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +    ++++++|+|+|+..+.+++++.+.    +|+|.|+.  +++..+|+.+|++|+||..|++|++++|||+||+|||
T Consensus       542 l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVV  619 (694)
T PRK15179        542 FAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVV  619 (694)
T ss_pred             HHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEE
Confidence            4    789999999999888888877643    69999998  6899999999999999999999999999999999999


Q ss_pred             EecCCCCCcccccCCCCCeeEeeCCCC--HHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 016648          279 GVRAGGIPDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       279 ~s~~~~~~e~~~~~~~~~~g~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~  352 (385)
                      +|+.++..|++   .++.+|++++++|  .+++++++.+++.+......+++++++.+ ++|||+.+++++. ++|+
T Consensus       620 at~~gG~~EiV---~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~-~lY~  692 (694)
T PRK15179        620 TTLAGGAGEAV---QEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTV-RCYQ  692 (694)
T ss_pred             EECCCChHHHc---cCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            99999999999   8999999999776  46889999888876655567788899888 5799999999997 6885

>PLN02316 synthase/transferase

Probab=100.00  E-value=7.3e-36  Score=288.49  Aligned_cols=275  Identities=21%  Similarity=0.264  Sum_probs=215.4

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHH------hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhH
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKL------LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  135 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~  135 (385)
                      .+|||||+|++..... +.+++..      .++|+|+|+|+....  .            ...+..+..+|.|+++|+.+
T Consensus       708 ~~PDIIHaHDW~talv-a~llk~~~~~~~~~~~p~V~TiHnl~~~--~------------n~lk~~l~~AD~ViTVS~ty  772 (1036)
T PLN02316        708 FHPDIIHCHDWSSAPV-AWLFKDHYAHYGLSKARVVFTIHNLEFG--A------------NHIGKAMAYADKATTVSPTY  772 (1036)
T ss_pred             CCCCEEEECCChHHHH-HHHHHHhhhhhccCCCCEEEEeCCcccc--h------------hHHHHHHHHCCEEEeCCHHH
Confidence            5899999999854333 3333332      458999999985311  0            12445778999999999999


Q ss_pred             HHHHHHhccc--CCCcEEEeeCCCCCCCCCCCCCC-------------------hhhHhhhcCCCCCCcEEEEEeecccc
Q 016648          136 GKDLEAARVT--AANKIRIWKKGVDSESFHPRFRS-------------------SEMRWRLSNGEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       136 ~~~~~~~~~~--~~~~i~vi~~~v~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~G~~~~~  194 (385)
                      ++.+...+..  ...++.+|+||+|.+.|.|....                   ...+.++.....+.++++++||+.+.
T Consensus       773 a~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~q  852 (1036)
T PLN02316        773 SREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQ  852 (1036)
T ss_pred             HHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccc
Confidence            9998876542  24799999999999887664221                   11233343332367899999999999


Q ss_pred             ccHHHHHHHHHhC--CCceEEEEeCCcc---HHHHHHHHcC------CCeEEecccChHHHHHHHHhCcEEEEcCCCCCC
Q 016648          195 KSLDFLKRVMDRL--PEARIAFIGDGPY---REELEKMFTG------MPAVFTGMLLGEELSQAYASGDVFVMPSESETL  263 (385)
Q Consensus       195 k~~~~l~~a~~~~--~~~~l~i~G~g~~---~~~l~~~~~~------~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~  263 (385)
                      ||++.+++|+..+  ++++|+|+|+|++   ...+++++..      .++.|.|..+......+|+.||++|+||..|++
T Consensus       853 KGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~  932 (1036)
T PLN02316        853 KGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPC  932 (1036)
T ss_pred             cCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCc
Confidence            9999999999886  5799999998865   3455555552      257888777544446899999999999999999


Q ss_pred             cHHHHHHHhcCCcEEEecCCCCCcccccCCCC-------------CeeEeeCCCCHHHHHHHHhHhhcC-HHHHHHHHHH
Q 016648          264 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG-------------KIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQA  329 (385)
Q Consensus       264 ~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~-------------~~g~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~  329 (385)
                      |++.+|||+||+|+|++++||+++.+   .++             .+|+++++.|+++++++|.+++.+ .+....++..
T Consensus       933 GLvqLEAMa~GtppVvs~vGGL~DtV---~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~ 1009 (1036)
T PLN02316        933 GLTQLTAMRYGSIPVVRKTGGLFDTV---FDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSL 1009 (1036)
T ss_pred             cHHHHHHHHcCCCeEEEcCCCcHhhc---cccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence            99999999999999999999999998   553             689999999999999999999986 3555667888


Q ss_pred             HHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 016648          330 ARQEM-EKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       330 a~~~~-~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      +++.+ ++|||+..+++++ ++|+++.
T Consensus      1010 ~r~~m~~dFSW~~~A~~Y~-~LY~~a~ 1035 (1036)
T PLN02316       1010 CKRVMEQDWSWNRPALDYM-ELYHSAR 1035 (1036)
T ss_pred             HHHHHHhhCCHHHHHHHHH-HHHHHHh
Confidence            88887 5699999999997 7999875

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.2e-36  Score=275.78  Aligned_cols=291  Identities=31%  Similarity=0.438  Sum_probs=232.3

Q ss_pred             hHHHHHHhhcc--CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccc--cchhHHHHHHHHHHhCCe
Q 016648           52 SPRIISEVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSW--LVKPMWLVIKFLHRAADL  127 (385)
Q Consensus        52 ~~~l~~~i~~~--~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ad~  127 (385)
                      ...+.+.+++.  +||+||+|.+. ....+..+++..++|+|++.|+............+  ........++.+++.+|.
T Consensus        88 ~~~~~~~~~~~~~~~Div~~~~~~-~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  166 (398)
T cd03800          88 ADDLLRFLRREGGRPDLIHAHYWD-SGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADR  166 (398)
T ss_pred             HHHHHHHHHhcCCCccEEEEecCc-cchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCE
Confidence            45566777777  99999999763 34445566788899999999986543221111111  112223456778999999


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      ++++|+...+.+.+.+..+..++.++|||+|.+.+.+.......+.+.. ..+++++|+|+|++...||++.++++++.+
T Consensus       167 ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l  245 (398)
T cd03800         167 VIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLL-RDPDKPRILAVGRLDPRKGIDTLIRAYAEL  245 (398)
T ss_pred             EEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhc-cCCCCcEEEEEcccccccCHHHHHHHHHHH
Confidence            9999999999998887656667999999999887765433222122222 245678999999999999999999999887


Q ss_pred             ----CCceEEEEeCCccH------HHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhc
Q 016648          208 ----PEARIAFIGDGPYR------EELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  273 (385)
Q Consensus       208 ----~~~~l~i~G~g~~~------~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~  273 (385)
                          ++++++++|++...      ..++.+.+    ..++.+.|+++.+++..+|+.||++++||..|++|++++|||++
T Consensus       246 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~  325 (398)
T cd03800         246 PELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC  325 (398)
T ss_pred             HHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhc
Confidence                37999999976532      22233333    24799999999999999999999999999999999999999999


Q ss_pred             CCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          274 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       274 G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      |+|||+++.++..+++   .++.+|++++++|+++++++|.++++|++.++++++++++.+ ++|||+.+++++.
T Consensus       326 G~Pvi~s~~~~~~e~i---~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~  397 (398)
T cd03800         326 GLPVVATAVGGPRDIV---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARLL  397 (398)
T ss_pred             CCCEEECCCCCHHHHc---cCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            9999999999999999   888899999999999999999999999999999999999998 6799999999875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=3e-36  Score=281.84  Aligned_cols=294  Identities=22%  Similarity=0.301  Sum_probs=224.3

Q ss_pred             HHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHHhC---CCEEEEEecCCCcc-cccccccc-------c-chh-----H
Q 016648           54 RIISEVAR--FKPDIIHASSPGIMVFGALIIAKLLC---VPIVMSYHTHVPVY-IPRYTFSW-------L-VKP-----M  114 (385)
Q Consensus        54 ~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~-~~~~~~~~-------~-~~~-----~  114 (385)
                      ...+.+++  .+|||||+|++..... +..++...+   +|+|+|+|+..... .+......       . ...     .
T Consensus       117 a~~~~~~~~~~~~DiiH~hdw~~~~~-~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (473)
T TIGR02095       117 AAAELLSGLGWQPDVVHAHDWHTALV-PALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGR  195 (473)
T ss_pred             HHHHHHHhcCCCCCEEEECCcHHHHH-HHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCc
Confidence            44445543  6899999999754433 444444444   99999999965321 11100000       0 000     1


Q ss_pred             HHHHHHHHHhCCeEEEcChhHHHHHHHh-cc--------cCCCcEEEeeCCCCCCCCCCCCCC-----------------
Q 016648          115 WLVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAANKIRIWKKGVDSESFHPRFRS-----------------  168 (385)
Q Consensus       115 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~--------~~~~~i~vi~~~v~~~~~~~~~~~-----------------  168 (385)
                      ..+.+..+..||.++++|+.+++.+... ++        .+..++.+|+||+|.+.|.|....                 
T Consensus       196 ~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~  275 (473)
T TIGR02095       196 VNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAEN  275 (473)
T ss_pred             hHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhh
Confidence            2245678899999999999999888652 11        135689999999999988764321                 


Q ss_pred             -hhhHhhhcCCC-CCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcCC--CeEEecccC
Q 016648          169 -SEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLL  240 (385)
Q Consensus       169 -~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~~--~i~~~g~~~  240 (385)
                       ...+.+..... ++.++++++|++.+.||++.+++++.++  .+++++|+|+|+  ..+.++++..+.  ++.+.+..+
T Consensus       276 k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~  355 (473)
T TIGR02095       276 KEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYD  355 (473)
T ss_pred             HHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Confidence             11233333222 3678999999999999999999999887  469999999884  445666665433  578888888


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC------CeeEeeCCCCHHHHHHHHh
Q 016648          241 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG------KIGYLFNPGDLDDCLSKLE  314 (385)
Q Consensus       241 ~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~------~~g~~~~~~~~~~l~~~i~  314 (385)
                      .+++..+|+.||++++||..|++|++++|||+||+|+|+++.++..|.+   .++      .+|+++++.|+++++++|.
T Consensus       356 ~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v---~~~~~~~~~~~G~l~~~~d~~~la~~i~  432 (473)
T TIGR02095       356 EALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTV---VDGDPEAESGTGFLFEEYDPGALLAALS  432 (473)
T ss_pred             HHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceE---ecCCCCCCCCceEEeCCCCHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999   676      8999999999999999999


Q ss_pred             Hhhc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          315 PLLY----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       315 ~ll~----~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      ++++    +++.++++++++.+  ++|||+++++++. ++|+++
T Consensus       433 ~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~Y~~l  473 (473)
T TIGR02095       433 RALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYV-ELYRSL  473 (473)
T ss_pred             HHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHH-HHHHhC
Confidence            9887    88888888887753  5799999999997 799864

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=6.8e-36  Score=271.26  Aligned_cols=276  Identities=24%  Similarity=0.394  Sum_probs=218.0

Q ss_pred             ccchHHHHHHhhc---cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhC
Q 016648           49 LALSPRIISEVAR---FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA  125 (385)
Q Consensus        49 ~~~~~~l~~~i~~---~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  125 (385)
                      ..+...+...+..   .++|+||+|+..  .+...+..+..+.|+++++|+.+.                   ...+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-------------------~~~~~~~  140 (380)
T PRK15484         82 LPYSQRILNIAHKFTITKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-------------------PELLDKN  140 (380)
T ss_pred             hhHHHHHHHHHHhcCCCCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-------------------hhHhccC
Confidence            3334455555544   569999999853  222333445567899999997531                   1234568


Q ss_pred             CeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHH
Q 016648          126 DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  205 (385)
Q Consensus       126 d~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~  205 (385)
                      +.++++|+.+++.+.+.+  +..++.++|||+|...+.+... ...+.+.. ..++..+++|+|++.+.||++.+++|++
T Consensus       141 ~~ii~~S~~~~~~~~~~~--~~~~i~vIpngvd~~~~~~~~~-~~~~~~~~-~~~~~~~il~~Grl~~~Kg~~~Li~A~~  216 (380)
T PRK15484        141 AKIIVPSQFLKKFYEERL--PNADISIVPNGFCLETYQSNPQ-PNLRQQLN-ISPDETVLLYAGRISPDKGILLLMQAFE  216 (380)
T ss_pred             CEEEEcCHHHHHHHHhhC--CCCCEEEecCCCCHHHcCCcch-HHHHHHhC-CCCCCeEEEEeccCccccCHHHHHHHHH
Confidence            999999999999988764  4568999999999887765322 12222322 2345688999999999999999999998


Q ss_pred             hC----CCceEEEEeCCcc---------HHHHHHHHc--CCCeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHH
Q 016648          206 RL----PEARIAFIGDGPY---------REELEKMFT--GMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLE  269 (385)
Q Consensus       206 ~~----~~~~l~i~G~g~~---------~~~l~~~~~--~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~E  269 (385)
                      .+    ++++++|+|+|+.         .+.+++++.  ..++.+.|+++.+++..+|+.||++++||. .|++|++++|
T Consensus       217 ~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lE  296 (380)
T PRK15484        217 KLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVE  296 (380)
T ss_pred             HHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHH
Confidence            65    7899999997653         123444433  247999999999999999999999999997 4999999999


Q ss_pred             HHhcCCcEEEecCCCCCcccccCCCCCeeE-eeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          270 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       270 a~a~G~PvI~s~~~~~~e~~~~~~~~~~g~-~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      ||+||+|||+|+.++.+|++   .++.+|+ ++++.|+++++++|.++++|++. .++++++++.+ ++|||+.+++++.
T Consensus       297 Ama~G~PVI~s~~gg~~Eiv---~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~  372 (380)
T PRK15484        297 AMAAGKPVLASTKGGITEFV---LEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGVTQRFE  372 (380)
T ss_pred             HHHcCCCEEEeCCCCcHhhc---ccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999   8899998 56788999999999999999985 78999999887 6799999999997


Q ss_pred             HHHHHHH
Q 016648          348 NEQYNAA  354 (385)
Q Consensus       348 ~~iy~~~  354 (385)
                       ++|++.
T Consensus       373 -~~l~~~  378 (380)
T PRK15484        373 -EQIHNW  378 (380)
T ss_pred             -HHHHHh
Confidence             687764

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.9e-36  Score=273.49  Aligned_cols=280  Identities=20%  Similarity=0.243  Sum_probs=211.1

Q ss_pred             hccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCc------cccccccccc-chhH---HHHHHHHHHhCCeEE
Q 016648           60 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV------YIPRYTFSWL-VKPM---WLVIKFLHRAADLTL  129 (385)
Q Consensus        60 ~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~~~~~~~~~-~~~~---~~~~~~~~~~ad~ii  129 (385)
                      +.++||+||+|......  ..+.....++|+|.+.|-+...      ..+....... ....   .......++.+|.++
T Consensus        84 ~~~~pdvi~~h~~~~~~--~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi  161 (396)
T cd03818          84 KGFRPDVIVAHPGWGET--LFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGV  161 (396)
T ss_pred             cCCCCCEEEECCccchh--hhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEE
Confidence            44689999999753322  2222233578988766532211      1111111100 0111   112346789999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEee-ccccccHHHHHHHHHhC-
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-LGVEKSLDFLKRVMDRL-  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-~~~~k~~~~l~~a~~~~-  207 (385)
                      ++|+.+++.+.+.+   .+++.+||||+|.+.+.+...............++.++++|+|+ +.+.||++.+++|+..+ 
T Consensus       162 ~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~  238 (396)
T cd03818         162 SPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLL  238 (396)
T ss_pred             CCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHH
Confidence            99999999887654   36899999999999887653321111111111346678999997 99999999999999765 


Q ss_pred             ---CCceEEEEeCCc------------cHHHH-HHHHc---CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHH
Q 016648          208 ---PEARIAFIGDGP------------YREEL-EKMFT---GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL  268 (385)
Q Consensus       208 ---~~~~l~i~G~g~------------~~~~l-~~~~~---~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~  268 (385)
                         ++++++|+|++.            ..+.+ +++..   ..+|+|+|+++++++..+|+.||++++||..|++|++++
T Consensus       239 ~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~ll  318 (396)
T cd03818         239 RARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLL  318 (396)
T ss_pred             HHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHH
Confidence               789999999632            12222 33222   347999999999999999999999999999999999999


Q ss_pred             HHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHH
Q 016648          269 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIR  347 (385)
Q Consensus       269 Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~-~s~~~~~~~~~  347 (385)
                      |||+||+|||+|+.++..|++   .++.+|++++++|+++++++|.++++|++.++++++++++.+++ |||+.++++++
T Consensus       319 EAmA~G~PVIas~~~g~~e~i---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         319 EAMACGCLVVGSDTAPVREVI---TDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             HHHHCCCCEEEcCCCCchhhc---ccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence            999999999999999999999   88899999999999999999999999999999999999999854 99999998875

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=1.4e-35  Score=268.66  Aligned_cols=273  Identities=30%  Similarity=0.448  Sum_probs=229.7

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+.+++.+||+||+|..........+.++..++|++++.|+.........          ..++..++.+|.+++
T Consensus        67 ~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~vi~  136 (355)
T cd03799          67 QALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA----------IDLDEKLARADFVVA  136 (355)
T ss_pred             HHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch----------HHHHHHHhhCCEEEE
Confidence            3445667778899999999987444444555566668999999997432211110          356778899999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                      +|+.+++.+.+.++.+..++.++|||+|.+.+.+...         ....+++.++++|++.+.||++.++++++.+   
T Consensus       137 ~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~---------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~  207 (355)
T cd03799         137 ISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP---------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR  207 (355)
T ss_pred             CCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc---------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc
Confidence            9999999999985556789999999999887765420         1234677899999999999999999999876   


Q ss_pred             -CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCC------CCCcHHHHHHHhcCCc
Q 016648          208 -PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSES------ETLGLVVLEAMSSGIP  276 (385)
Q Consensus       208 -~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~------e~~~~~~~Ea~a~G~P  276 (385)
                       ++++++++|.++..+.+++.+.+    .+|.+.|+++.+++..+|+.||++++||..      |++|++++|||++|+|
T Consensus       208 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~P  287 (355)
T cd03799         208 GIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLP  287 (355)
T ss_pred             CCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCC
Confidence             47999999999888777776654    369999999999999999999999999998      9999999999999999


Q ss_pred             EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHH
Q 016648          277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRT  345 (385)
Q Consensus       277 vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~  345 (385)
                      +|+++.++.++++   .++.+|++++++|+++++++|.++++|++.+.++++++++.+ ++|||+..+++
T Consensus       288 vi~~~~~~~~~~i---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         288 VISTDVSGIPELV---EDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             EEecCCCCcchhh---hCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            9999999999999   888899999999999999999999999999999999999998 56999998875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.7e-35  Score=269.38  Aligned_cols=280  Identities=18%  Similarity=0.229  Sum_probs=214.9

Q ss_pred             HhhccCCCEEEeCCCchh--HHHHHHHHHHhCCCEEEEEecCCCcccc--cccccccchhHHHHHHHHHHhCCeEEEcCh
Q 016648           58 EVARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPVYIP--RYTFSWLVKPMWLVIKFLHRAADLTLVPSV  133 (385)
Q Consensus        58 ~i~~~~pDiI~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~  133 (385)
                      ++++.+||+||+|.+...  ...+.++++..++|+|++.|+.+.....  ........+...++++.+++.+|.++++|+
T Consensus        90 l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~  169 (415)
T cd03816          90 LYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTK  169 (415)
T ss_pred             HHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCEeeecCH
Confidence            456678999999975432  3345556777899999999986432111  111122334566778899999999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhh----------------hcCCCCCCcEEEEEeeccccccH
Q 016648          134 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR----------------LSNGEPDKPLIVHVGRLGVEKSL  197 (385)
Q Consensus       134 ~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~~~G~~~~~k~~  197 (385)
                      .+++.+.+ ++.+.+++.+||||.+ ..|.+..........                .....++..+++++|++.+.||+
T Consensus       170 ~~~~~l~~-~~~~~~ki~vI~Ng~~-~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~  247 (415)
T cd03816         170 AMKEDLQQ-FNNWKIRATVLYDRPP-EQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDF  247 (415)
T ss_pred             HHHHHHHh-hhccCCCeeecCCCCH-HHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCH
Confidence            99999988 4457899999999954 445443221111100                01112345678889999999999


Q ss_pred             HHHHHHHHhC----------CCceEEEEeCCccHHHHHHHHcCC---CeEEe-cccChHHHHHHHHhCcEEEEcCC---C
Q 016648          198 DFLKRVMDRL----------PEARIAFIGDGPYREELEKMFTGM---PAVFT-GMLLGEELSQAYASGDVFVMPSE---S  260 (385)
Q Consensus       198 ~~l~~a~~~~----------~~~~l~i~G~g~~~~~l~~~~~~~---~i~~~-g~~~~~~~~~~~~~adi~v~ps~---~  260 (385)
                      +.+++|++.+          ++++++|+|+|+..+.+++++.+.   ++.+. |+++.+++..+|+.||+++.|+.   .
T Consensus       248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~  327 (415)
T cd03816         248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSG  327 (415)
T ss_pred             HHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccc
Confidence            9999999865          468999999999988888887754   45544 78999999999999999987532   4


Q ss_pred             CCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC---HHHHHHHHHHHHHHHHhC
Q 016648          261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN---QELRETMGQAARQEMEKY  337 (385)
Q Consensus       261 e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~a~~~~~~~  337 (385)
                      +++|++++|||+||+|||+++.++..|++   +++.+|++++  |+++++++|..+++|   ++.+++|++++++.. ++
T Consensus       328 ~~~p~~~~Eama~G~PVI~s~~~~~~eiv---~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~  401 (415)
T cd03816         328 LDLPMKVVDMFGCGLPVCALDFKCIDELV---KHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-EL  401 (415)
T ss_pred             cCCcHHHHHHHHcCCCEEEeCCCCHHHHh---cCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hc
Confidence            78999999999999999999999999999   8999999985  899999999999999   899999999999886 55


Q ss_pred             CHHHHHHH
Q 016648          338 DWRAATRT  345 (385)
Q Consensus       338 s~~~~~~~  345 (385)
                      +|+....+
T Consensus       402 ~~~~~~~~  409 (415)
T cd03816         402 RWDENWDR  409 (415)
T ss_pred             CHHHHHHH
Confidence            56554443

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=1.1e-34  Score=263.28  Aligned_cols=293  Identities=35%  Similarity=0.559  Sum_probs=241.9

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      .....+.+.+++.+||+||++++....... ..++..++|+++++|+..+...... ............+..++.+|.++
T Consensus        72 ~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i  149 (374)
T cd03801          72 LLALRLRRLLRRERFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNE-LGLLLKLARALERRALRRADRII  149 (374)
T ss_pred             HHHHHHHHHhhhcCCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccc-hhHHHHHHHHHHHHHHHhCCEEE
Confidence            345567788889999999999975554433 5667789999999999775543221 12223344557788899999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC--
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--  207 (385)
                      +.|+.+.+.+.+.+..+..++.++|||++...+.+..  .... ......++.+.++++|++...||++.+++++..+  
T Consensus       150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~  226 (374)
T cd03801         150 AVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP--RAAR-RRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRK  226 (374)
T ss_pred             EecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc--hHHH-hhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence            9999999999998875557999999999988775432  1111 1112344678899999999999999999999876  


Q ss_pred             --CCceEEEEeCCccHHHHHHHH----cCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          208 --PEARIAFIGDGPYREELEKMF----TGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       208 --~~~~l~i~G~g~~~~~l~~~~----~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                        ++++++++|.++....+++.+    ...++.+.|+++.+++.++|+.||++++|+..+++|++++|||++|+|||+++
T Consensus       227 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~  306 (374)
T cd03801         227 EYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASD  306 (374)
T ss_pred             hcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeC
Confidence              469999999888877777654    33479999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQY  351 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy  351 (385)
                      .++..+++   .++.+|+++++.|+++++++|.++++|++.++++++++++.. +.|+|+.+++++. .+|
T Consensus       307 ~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  373 (374)
T cd03801         307 VGGIPEVV---EDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE-EVY  373 (374)
T ss_pred             CCChhHHh---cCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHH-Hhh
Confidence            99999999   778999999999999999999999999999999999999766 6799999999997 465

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.2e-34  Score=261.10  Aligned_cols=271  Identities=30%  Similarity=0.410  Sum_probs=221.6

Q ss_pred             hhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHH
Q 016648           59 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  138 (385)
Q Consensus        59 i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~  138 (385)
                      +...+||+||+|.+.......... ...++|++++.|+.....      .........+++.+++.+|.++++|+...+.
T Consensus        79 ~~~~~~Dii~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~------~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~  151 (357)
T cd03795          79 KLAKKADVIHLHFPNPLADLALLL-LPRKKPVVVHWHSDIVKQ------KLLLKLYRPLQRRFLRRADAIVATSPNYAET  151 (357)
T ss_pred             hcCCCCCEEEEecCcchHHHHHHH-hccCceEEEEEcChhhcc------chhhhhhhHHHHHHHHhcCEEEeCcHHHHHH
Confidence            567899999999875443332222 226889999999743211      1223334456778899999999999999998


Q ss_pred             HHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCC
Q 016648          139 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDG  218 (385)
Q Consensus       139 ~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g  218 (385)
                      +...+.. ..++.++|||+|.+.+.+......   .......+.++++|+|++.+.||++.++++++++.+++++++|+|
T Consensus       152 ~~~~~~~-~~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~l~i~G~g  227 (357)
T cd03795         152 SPVLRRF-RDKVRVIPLGLDPARYPRPDALEE---AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALPDAPLVIVGEG  227 (357)
T ss_pred             HHHhcCC-ccceEEecCCCChhhcCCcchhhh---HhhcCCCCCcEEEEecccccccCHHHHHHHHHhccCcEEEEEeCC
Confidence            8776653 378999999999887765432111   111234567899999999999999999999999989999999999


Q ss_pred             ccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccC
Q 016648          219 PYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED  292 (385)
Q Consensus       219 ~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~  292 (385)
                      +....+++.+.    ..+|.+.|+++++++..+|+.||++++||.  .|++|.+++|||++|+|||+++.++..+.+   
T Consensus       228 ~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i---  304 (357)
T cd03795         228 PLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYV---  304 (357)
T ss_pred             hhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHH---
Confidence            88887777663    347999999999999999999999999986  599999999999999999999999999988   


Q ss_pred             CC-CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHH
Q 016648          293 QD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAAT  343 (385)
Q Consensus       293 ~~-~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~  343 (385)
                      .+ +.+|++++++|+++++++|.++++|++.++++++++++.+ ++|||+.++
T Consensus       305 ~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         305 NLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             hhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence            65 8899999999999999999999999999999999999998 569998763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1.7e-35  Score=270.60  Aligned_cols=308  Identities=17%  Similarity=0.127  Sum_probs=226.4

Q ss_pred             cCCCCccccceeeccccccccCCCCcc----cccccccchHHHHHHhhccCCCEEEeCCCchhHHH--HHHHHHHhCCCE
Q 016648           17 FGLKTDLFFWILNFFHHIYSFPCPWYQ----KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFG--ALIIAKLLCVPI   90 (385)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~--~~~~~~~~~~p~   90 (385)
                      ..+...+..|+.........+.+.+|.    ....+....-.+.+.+..++|||||+++|..+++.  +..++++.+ |+
T Consensus       384 ~eQe~~ir~wl~~r~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PV  462 (794)
T PLN02501        384 EEQESYIRNWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HV  462 (794)
T ss_pred             HHHHHHHHHHHHHhcCCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-Ce
Confidence            334445555554333333333333322    22345556778999999999999999999888877  778888888 99


Q ss_pred             EEEEecCCCcccccccccccchhHHHHHHHHHHh--CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCC
Q 016648           91 VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA--ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS  168 (385)
Q Consensus        91 v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~  168 (385)
                      |.++|..++.+.......++...........+..  ||.++++|..+.+ +      +...+.. .||||.+.|.+....
T Consensus       463 VasyHTny~eYl~~y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~-L------~~~vI~n-VnGVDte~F~P~~r~  534 (794)
T PLN02501        463 VGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD-L------PKSVICN-VHGVNPKFLKIGEKV  534 (794)
T ss_pred             EEEEeCCcHHHHhHhcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH-h------cccceee-cccccccccCCcchh
Confidence            9999999988777665555544333233233333  8999999977773 3      1222222 269999999876443


Q ss_pred             hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCccHHHHHHHHcCC--CeEEecccChH
Q 016648          169 SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM--PAVFTGMLLGE  242 (385)
Q Consensus       169 ~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~~~~~l~~~~~~~--~i~~~g~~~~~  242 (385)
                      ... .+... ......++|+|++.+.||++.++++++.+    ++++++|+|+|+..+.+++++.+.  ++.|+|..  +
T Consensus       535 ~~~-r~lgi-~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~--d  610 (794)
T PLN02501        535 AEE-RELGQ-QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGR--D  610 (794)
T ss_pred             HHH-HhcCC-ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCC--C
Confidence            222 22221 12234589999999999999999999764    689999999999999998887655  47788887  5


Q ss_pred             HHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHH
Q 016648          243 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  322 (385)
Q Consensus       243 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~  322 (385)
                      +...+|+.+|++|+||..|++|++++||||||+|||+++.++.. .+   .++.+|+++  +|.++++++|.++++++..
T Consensus       611 d~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-~V---~~g~nGll~--~D~EafAeAI~~LLsd~~~  684 (794)
T PLN02501        611 HADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNE-FF---RSFPNCLTY--KTSEDFVAKVKEALANEPQ  684 (794)
T ss_pred             CHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCc-eE---eecCCeEec--CCHHHHHHHHHHHHhCchh
Confidence            66689999999999999999999999999999999999999854 46   567788775  5999999999999998764


Q ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHH
Q 016648          323 RETMGQAARQEMEKYDWRAATRTIRN  348 (385)
Q Consensus       323 ~~~~~~~a~~~~~~~s~~~~~~~~~~  348 (385)
                      ...+..     ..++||+++++++++
T Consensus       685 rl~~~a-----~~~~SWeAaadrLle  705 (794)
T PLN02501        685 PLTPEQ-----RYNLSWEAATQRFME  705 (794)
T ss_pred             hhHHHH-----HhhCCHHHHHHHHHH
Confidence            433221     348999999999975

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=7.1e-35  Score=267.14  Aligned_cols=284  Identities=21%  Similarity=0.266  Sum_probs=217.8

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccc------cccccc----chhHHHHHHH
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR------YTFSWL----VKPMWLVIKF  120 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~------~~~~~~----~~~~~~~~~~  120 (385)
                      +.+.+.+.+++.++|+||+++.....+   ...+..++|+|++.|+........      ...++.    .+.+..+++.
T Consensus        92 ~~~~l~~~~~~~~~D~v~~~~~~~~~~---~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  168 (397)
T TIGR03087        92 LARWVNALLAAEPVDAIVVFSSAMAQY---VTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERA  168 (397)
T ss_pred             HHHHHHHHHhhCCCCEEEEecccccee---ccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHH
Confidence            455677788889999999997533221   111356899999999853221111      001111    1223457788


Q ss_pred             HHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHH
Q 016648          121 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  200 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l  200 (385)
                      +++.+|.++++|+..++.+.+.++....++.++|||+|.+.|.+......      ...+++.+++|+|++.+.||++.+
T Consensus       169 ~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~------~~~~~~~~ilf~G~l~~~k~~~~l  242 (397)
T TIGR03087       169 IAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN------PYPPGKRVLVFTGAMDYWPNIDAV  242 (397)
T ss_pred             HHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC------CCCCCCcEEEEEEecCCccCHHHH
Confidence            99999999999999999998876555678999999999988765422110      012356789999999999999987


Q ss_pred             HHH----H----HhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHH
Q 016648          201 KRV----M----DRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAM  271 (385)
Q Consensus       201 ~~a----~----~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~  271 (385)
                      +.+    +    +..|+++++|+|+|+. +.++++....+|++.|+++  ++..+|+.||++|+||. .||+|++++|||
T Consensus       243 ~~~~~~~~~~l~~~~p~~~l~ivG~g~~-~~~~~l~~~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm  319 (397)
T TIGR03087       243 VWFAERVFPAVRARRPAAEFYIVGAKPS-PAVRALAALPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM  319 (397)
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEECCCCh-HHHHHhccCCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence            743    3    2347899999998875 4566666667899999994  78999999999999997 589999999999


Q ss_pred             hcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Q 016648          272 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQ  350 (385)
Q Consensus       272 a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~i  350 (385)
                      +||+|||+|+.+. ..+.   ..+++|+++. +|+++++++|.++++|++.++++++++++.+ ++|||+..++++. ++
T Consensus       320 a~G~PVV~t~~~~-~~i~---~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~-~~  393 (397)
T TIGR03087       320 AMAKPVVASPEAA-EGID---ALPGAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLD-AL  393 (397)
T ss_pred             HcCCCEEecCccc-cccc---ccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HH
Confidence            9999999998754 2333   3455788886 8999999999999999999999999999998 5799999999996 67


Q ss_pred             HH
Q 016648          351 YN  352 (385)
Q Consensus       351 y~  352 (385)
                      |+
T Consensus       394 l~  395 (397)
T TIGR03087       394 LE  395 (397)
T ss_pred             hc
Confidence            64

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=9.2e-35  Score=264.27  Aligned_cols=280  Identities=16%  Similarity=0.146  Sum_probs=201.3

Q ss_pred             chHHHHHHh-hccCCCEEEeCCCchh--HHHHH------HHHHHhCCCEEEEEecCCCcc--------ccccc-------
Q 016648           51 LSPRIISEV-ARFKPDIIHASSPGIM--VFGAL------IIAKLLCVPIVMSYHTHVPVY--------IPRYT-------  106 (385)
Q Consensus        51 ~~~~l~~~i-~~~~pDiI~~~~~~~~--~~~~~------~~~~~~~~p~v~~~h~~~~~~--------~~~~~-------  106 (385)
                      ...++.+.+ ++++|||||+|+....  .+..+      +..+..++|+|+|+||.++..        ...+.       
T Consensus        81 ~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp  160 (405)
T PRK10125         81 NFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP  160 (405)
T ss_pred             hHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCC
Confidence            355666666 6889999999986432  12111      112345799999999988552        00110       


Q ss_pred             ----c-----cccch---hHHHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhh
Q 016648          107 ----F-----SWLVK---PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR  174 (385)
Q Consensus       107 ----~-----~~~~~---~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~  174 (385)
                          +     ....+   ..+...+.+.+.++.++++|+++++.+.+.++  ..++.+||||+|.+.+.+.......  +
T Consensus       161 ~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~~~~~--~  236 (405)
T PRK10125        161 TLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAELPPV--R  236 (405)
T ss_pred             CccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccccccccc--c
Confidence                0     00001   11112333445678999999999999887654  4689999999997533221111000  0


Q ss_pred             hcCCCCCCcEEEEEeec--cccccHHHHHHHHHhC-CCceEEEEeCCccHHHHHHHHcCCCeEEecccCh-HHHHHHHHh
Q 016648          175 LSNGEPDKPLIVHVGRL--GVEKSLDFLKRVMDRL-PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-EELSQAYAS  250 (385)
Q Consensus       175 ~~~~~~~~~~i~~~G~~--~~~k~~~~l~~a~~~~-~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~-~~~~~~~~~  250 (385)
                         ..+++.+++++|+.  .+.||++.+++|+..+ ++++++++|.++...       ..++.+.|+..+ +++.++|+.
T Consensus       237 ---~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~~-------~~~v~~~g~~~~~~~l~~~y~~  306 (405)
T PRK10125        237 ---ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPFT-------AGNVVNHGFETDKRKLMSALNQ  306 (405)
T ss_pred             ---cCCCCCEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCccc-------ccceEEecCcCCHHHHHHHHHh
Confidence               13466789999984  4679999999999987 578999999875321       236888998744 789999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHH----H
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET----M  326 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~----~  326 (385)
                      ||++|+||..|++|++++||||||+|||+|+.||.+|++   .++ +|++++++|+++|++.+     +++..++    +
T Consensus       307 aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv---~~~-~G~lv~~~d~~~La~~~-----~~~~~~~~~~~~  377 (405)
T PRK10125        307 MDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVL---QKS-GGKTVSEEEVLQLAQLS-----KPEIAQAVFGTT  377 (405)
T ss_pred             CCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhE---eCC-cEEEECCCCHHHHHhcc-----CHHHHHHhhhhH
Confidence            999999999999999999999999999999999999998   554 89999999999999854     3333332    2


Q ss_pred             HHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 016648          327 GQAARQEM-EKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       327 ~~~a~~~~-~~~s~~~~~~~~~~~iy~~~  354 (385)
                      ..++++.+ ++||++.++++++ ++|+++
T Consensus       378 ~~~~r~~~~~~fs~~~~~~~y~-~lY~~l  405 (405)
T PRK10125        378 LAEFSQRSRAAYSGQQMLEEYV-NFYQNL  405 (405)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHH-HHHHhC
Confidence            34577776 5699999999998 699863

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.2e-35  Score=267.13  Aligned_cols=282  Identities=25%  Similarity=0.382  Sum_probs=229.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .......+.+.+||+||++++.....      +..++|+++++|+..+...+..............++..++.+|.++++
T Consensus        74 ~~~~~~~~~~~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  147 (365)
T cd03809          74 RAGDRLLLLLLGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITV  147 (365)
T ss_pred             HHHHHHHhhhcCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEc
Confidence            33455566668999999998644322      567999999999987655544433333455667788899999999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC---
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP---  208 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~---  208 (385)
                      |+.+++.+.+.++.+..++.++|||++...+.......   ........++++++++|++.+.||++.+++++..++   
T Consensus       148 s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~  224 (365)
T cd03809         148 SEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE---VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKG  224 (365)
T ss_pred             cHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH---HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhc
Confidence            99999999998776678999999999988775543221   111223456789999999999999999999998873   


Q ss_pred             -CceEEEEeCCccH-HHHHH----HHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          209 -EARIAFIGDGPYR-EELEK----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       209 -~~~l~i~G~g~~~-~~l~~----~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                       +++++++|.+... .....    .....++++.|+++.+++..+|+.||++++||..|++|++++|||++|+|||+++.
T Consensus       225 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~  304 (365)
T cd03809         225 PDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNI  304 (365)
T ss_pred             CCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCC
Confidence             4799999965432 22222    22344799999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       283 ~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      +++.|++     +.+|++++++|.++++++|.++++|++.+.++++++++.+++|+|+++++++.
T Consensus       305 ~~~~e~~-----~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~  364 (365)
T cd03809         305 SSLPEVA-----GDAALYFDPLDPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTARRTL  364 (365)
T ss_pred             CCcccee-----cCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            9999988     45688899999999999999999999999999999998888999999999875

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=1.2e-34  Score=268.40  Aligned_cols=279  Identities=18%  Similarity=0.195  Sum_probs=212.1

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc-cccchhHHHHHHHHHHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF-SWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...+.+.+...++||+|++.+.....+  ++.....+|+++++|+........... ..+...+... ....+.+|.+++
T Consensus       200 ~~~f~~~L~~~~~di~i~dr~~~~~~~--~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~-~~~~~~~D~iI~  276 (500)
T TIGR02918       200 IAYFLKQLNLTKKDIIILDRSTGIGQA--VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQ-FSNADYIDFFIT  276 (500)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcccchH--HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHH-HhchhhCCEEEE
Confidence            344445556678999999886543332  234556789999999843211111100 1011111111 123567899999


Q ss_pred             cChhHHHHHHHhcc---cCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          131 PSVAIGKDLEAARV---TAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~---~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      +|+..++.+.+.+.   .+..++.++|||++...+.+.            ....+..++++||+.+.||++.+++|+..+
T Consensus       277 ~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~------------~~r~~~~il~vGrl~~~Kg~~~li~A~~~l  344 (500)
T TIGR02918       277 ATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE------------QERKPFSIITASRLAKEKHIDWLVKAVVKA  344 (500)
T ss_pred             CCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc------------cccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence            99998888876542   235789999999865433221            122456899999999999999999998654


Q ss_pred             ----CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 ----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ----~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                          |++++.|+|+|+..+.+++++.+.    +|.+.|+.   ++.++|+.||++|+||..||+|++++|||+||+|||+
T Consensus       345 ~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~  421 (500)
T TIGR02918       345 KKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIG  421 (500)
T ss_pred             HhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEE
Confidence                789999999999888888877643    58999975   6888999999999999999999999999999999999


Q ss_pred             ecCC-CCCcccccCCCCCeeEeeCCC----C----HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 016648          280 VRAG-GIPDIIPEDQDGKIGYLFNPG----D----LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       280 s~~~-~~~e~~~~~~~~~~g~~~~~~----~----~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~i  350 (385)
                      ++.+ |.+|++   .++.+|++++.+    |    +++++++|.++++ ++.+++|+++|++.+++|||+.+++++. .+
T Consensus       422 ~dv~~G~~eiI---~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~-~l  496 (500)
T TIGR02918       422 FDVNYGNPTFI---EDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWK-KL  496 (500)
T ss_pred             ecCCCCCHHHc---cCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHH-HH
Confidence            9986 889999   899999999842    3    8899999999995 5578999999999889999999999997 57


Q ss_pred             HHH
Q 016648          351 YNA  353 (385)
Q Consensus       351 y~~  353 (385)
                      +++
T Consensus       497 l~~  499 (500)
T TIGR02918       497 VRE  499 (500)
T ss_pred             Hhh
Confidence            765

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-34  Score=263.14  Aligned_cols=271  Identities=25%  Similarity=0.368  Sum_probs=219.0

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....++.+.+++.+||+||+|+... .+.+.+.++..++|+++++|+......              ..+.+++++|.++
T Consensus        65 ~~~~~l~~~~~~~~~dii~~~~~~~-~~~~~~~~~~~~~~~i~~~h~~~~~~~--------------~~~~~~~~~~~vi  129 (355)
T cd03819          65 LNVARLRRLIREEKVDIVHARSRAP-AWSAYLAARRTRPPFVTTVHGFYSVNF--------------RYNAIMARGDRVI  129 (355)
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCch-hHHHHHHHHhcCCCEEEEeCCchhhHH--------------HHHHHHHhcCEEE
Confidence            3456788889999999999998643 333445567779999999998653221              3345678899999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChh----hHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHH
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE----MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  205 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~  205 (385)
                      ++|+.+.+.+.+.++.+..++.++|||+|...+.+......    .+.+. ...++.++++++|++...||++.++++++
T Consensus       130 ~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~  208 (355)
T cd03819         130 AVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREW-PLPKGKPVILLPGRLTRWKGQEVFIEALA  208 (355)
T ss_pred             EeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHc-CCCCCceEEEEeeccccccCHHHHHHHHH
Confidence            99999999999777767789999999999987765432211    11222 22456788999999999999999999998


Q ss_pred             hC----CCceEEEEeCCccHHHH----HHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcC-CCCCCcHHHHHHHh
Q 016648          206 RL----PEARIAFIGDGPYREEL----EKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMS  272 (385)
Q Consensus       206 ~~----~~~~l~i~G~g~~~~~l----~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps-~~e~~~~~~~Ea~a  272 (385)
                      .+    ++++++++|.++..+.+    .+.+.    ..+|.+.|+  .+++.++|+.||++++|| ..|++|++++|||+
T Consensus       209 ~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a  286 (355)
T cd03819         209 RLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQA  286 (355)
T ss_pred             HHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHh
Confidence            77    46999999987654332    22222    236999999  489999999999999999 78999999999999


Q ss_pred             cCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh-cCHHHHHHHHHHHHHHH-HhCCHHH
Q 016648          273 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-YNQELRETMGQAARQEM-EKYDWRA  341 (385)
Q Consensus       273 ~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll-~~~~~~~~~~~~a~~~~-~~~s~~~  341 (385)
                      +|+|||+++.++..+++   .++.+|++++++|+++++++|..++ .+++++.+++++|++.+ ++|+|+.
T Consensus       287 ~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~  354 (355)
T cd03819         287 MGRPVIASDHGGARETV---RPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR  354 (355)
T ss_pred             cCCCEEEcCCCCcHHHH---hCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999   8888999999999999999996555 48999999999999998 5699975

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-34  Score=262.65  Aligned_cols=267  Identities=24%  Similarity=0.310  Sum_probs=217.8

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCC-EEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL  139 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~  139 (385)
                      +.++|++|.++..........+.+..+.+ +|.+.|+.....  ..    .........+.+++.+|.++++|+..++.+
T Consensus       125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~----~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l  198 (407)
T cd04946         125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DR----YPSGYIPLRRYLLSSLDAVFPCSEQGRNYL  198 (407)
T ss_pred             ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hh----ccccchHHHHHHHhcCCEEEECCHHHHHHH
Confidence            45678888877655555555556666665 899999743211  10    011122345667899999999999999999


Q ss_pred             HHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----C--CceEE
Q 016648          140 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P--EARIA  213 (385)
Q Consensus       140 ~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~--~~~l~  213 (385)
                      .+.++...+++.++++|++...+.+..           ..++.+.++++|++.+.||++.+++++.++    |  +++++
T Consensus       199 ~~~~~~~~~ki~vi~~gv~~~~~~~~~-----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~  267 (407)
T cd04946         199 QKRYPAYKEKIKVSYLGVSDPGIISKP-----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWT  267 (407)
T ss_pred             HHHCCCccccEEEEECCcccccccCCC-----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEE
Confidence            988876778999999999876554321           234678899999999999999999999876    3  45678


Q ss_pred             EEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHh--CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCc
Q 016648          214 FIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYAS--GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  287 (385)
Q Consensus       214 i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e  287 (385)
                      ++|+|+..+.+++++..    .+|.+.|+++++++..+|+.  +|+++.||..||+|++++|||++|+|||+|+.++..|
T Consensus       268 iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e  347 (407)
T cd04946         268 HIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPE  347 (407)
T ss_pred             EEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHH
Confidence            89999888888877642    36999999999999999976  7889999999999999999999999999999999999


Q ss_pred             ccccCCCCCeeEeeCC-CCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          288 IIPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       288 ~~~~~~~~~~g~~~~~-~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      ++   .++.+|+++++ +|+++++++|.++++|++.+++|+++|++.+ ++|+|+...+++.
T Consensus       348 ~i---~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~  406 (407)
T cd04946         348 IV---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA  406 (407)
T ss_pred             Hh---cCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence            99   88889998876 4899999999999999999999999999998 5699999988874

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1.7e-34  Score=260.65  Aligned_cols=296  Identities=14%  Similarity=0.134  Sum_probs=213.5

Q ss_pred             ccccccccCCCCccc-c---cccccchHHHHHHhhccCCCEEEeCCCchhHHH--HHHHHHHhCCCEEEEEecCCCcccc
Q 016648           30 FFHHIYSFPCPWYQK-V---PLSLALSPRIISEVARFKPDIIHASSPGIMVFG--ALIIAKLLCVPIVMSYHTHVPVYIP  103 (385)
Q Consensus        30 ~~~~~~~~~~~~~~~-~---~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~--~~~~~~~~~~p~v~~~h~~~~~~~~  103 (385)
                      .......+++|++.. +   ........++.+.+++++|||||+++|..+++.  +..++++.++ +|.++|..++.+.+
T Consensus        79 ~v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~  157 (462)
T PLN02846         79 RISFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVK  157 (462)
T ss_pred             eEEEecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECCChHHHHH
Confidence            334556667776655 2   122234578999999999999999999777764  3444444444 78789997766554


Q ss_pred             cccccccchhH-HHHHHHHHH-hCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCC
Q 016648          104 RYTFSWLVKPM-WLVIKFLHR-AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD  181 (385)
Q Consensus       104 ~~~~~~~~~~~-~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~  181 (385)
                      ........... +.+.+++.+ ++|.++++|..+.+ +.+       .+...++|+|.+.|.+.....  ....  ...+
T Consensus       158 ~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~~~~--~~~~--~~~~  225 (462)
T PLN02846        158 REKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGKLKL--EQQK--NGEQ  225 (462)
T ss_pred             HhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCcccH--hhhc--CCCC
Confidence            33221212211 122233322 38999999986655 432       233445899999887654321  1111  1223


Q ss_pred             --CcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCccHHHHHHHHcCCC--e-EEecccChHHHHHHHHhCc
Q 016648          182 --KPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMP--A-VFTGMLLGEELSQAYASGD  252 (385)
Q Consensus       182 --~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~--i-~~~g~~~~~~~~~~~~~ad  252 (385)
                        .+.++|+||+.+.||++.++++++.+    ++++++|+|+|++.+++++++.+.+  + .+.|...   ..++|+.+|
T Consensus       226 ~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~~---~~~~~~~~D  302 (462)
T PLN02846        226 AFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRDH---ADPLFHDYK  302 (462)
T ss_pred             CcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCCC---HHHHHHhCC
Confidence              24689999999999999999999864    6889999999999999999887654  2 4666543   336899999


Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHH
Q 016648          253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  332 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~  332 (385)
                      ++|+||..|++|++++||||||+|||+++.++ .+++   .++.+|+.++  |.+++++++..++.++.  +.++.++  
T Consensus       303 vFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v---~~~~ng~~~~--~~~~~a~ai~~~l~~~~--~~~~~~a--  372 (462)
T PLN02846        303 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFF---KQFPNCRTYD--DGKGFVRATLKALAEEP--APLTDAQ--  372 (462)
T ss_pred             EEEECCCcccchHHHHHHHHcCCcEEEecCCC-ccee---ecCCceEecC--CHHHHHHHHHHHHccCc--hhHHHHH--
Confidence            99999999999999999999999999999997 5888   7899998885  89999999999998542  2223322  


Q ss_pred             HHHhCCHHHHHHHHHHHHHHH
Q 016648          333 EMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       333 ~~~~~s~~~~~~~~~~~iy~~  353 (385)
                       .++|||+..+++++ .+|+-
T Consensus       373 -~~~~SWe~~~~~l~-~~~~~  391 (462)
T PLN02846        373 -RHELSWEAATERFL-RVADL  391 (462)
T ss_pred             -HHhCCHHHHHHHHH-HHhcc
Confidence             25899999999998 57764

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-34  Score=272.47  Aligned_cols=293  Identities=22%  Similarity=0.304  Sum_probs=220.5

Q ss_pred             HHHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHH------hCCCEEEEEecCCCccccccc------ccc---------
Q 016648           53 PRIISEVAR--FKPDIIHASSPGIMVFGALIIAKL------LCVPIVMSYHTHVPVYIPRYT------FSW---------  109 (385)
Q Consensus        53 ~~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~~~~~~~~------~~~---------  109 (385)
                      +.+.+.+++  .+|||||+|++.....+. .++..      .++|+|+++|+..........      ..+         
T Consensus       117 ~~~~~~l~~~~~~pDviH~hd~~t~~~~~-~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  195 (476)
T cd03791         117 RAALELLRRLGWKPDIIHCHDWHTGLVPA-LLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGL  195 (476)
T ss_pred             HHHHHHHHhcCCCCcEEEECchHHHHHHH-HHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhccc
Confidence            345555655  799999999986444333 33333      489999999996543211000      000         


Q ss_pred             cchhHHHHHHHHHHhCCeEEEcChhHHHHHHHh---------cccCCCcEEEeeCCCCCCCCCCCCCCh-----------
Q 016648          110 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA---------RVTAANKIRIWKKGVDSESFHPRFRSS-----------  169 (385)
Q Consensus       110 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---------~~~~~~~i~vi~~~v~~~~~~~~~~~~-----------  169 (385)
                      ........++..+..||.++++|+..++.+.+.         ...+..++.+|+||+|.+.+.+.....           
T Consensus       196 ~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~  275 (476)
T cd03791         196 EFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLE  275 (476)
T ss_pred             ccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccc
Confidence            000112367788999999999999999888642         222457999999999999887654321           


Q ss_pred             -------hhHhhhcCC-CCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCcc--HHHHHHHHcC--CCeEE
Q 016648          170 -------EMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFTG--MPAVF  235 (385)
Q Consensus       170 -------~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~~--~~~l~~~~~~--~~i~~  235 (385)
                             ..+.+.... .++.++++|+|++.+.||++.++++++.+  .+++++++|.|+.  .+.++++..+  .++.+
T Consensus       276 ~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~  355 (476)
T cd03791         276 GKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAV  355 (476)
T ss_pred             cHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEE
Confidence                   122222221 35788999999999999999999999887  3589999998753  3455555543  47877


Q ss_pred             ecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCC------eeEeeCCCCHHHH
Q 016648          236 TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGK------IGYLFNPGDLDDC  309 (385)
Q Consensus       236 ~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~------~g~~~~~~~~~~l  309 (385)
                      .+..+.+++..+|+.||++++||..|++|++++|||+||+|||+++.++..|.+   .++.      +|+++++.|++++
T Consensus       356 ~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v---~~~~~~~~~~~G~~~~~~~~~~l  432 (476)
T cd03791         356 LIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTV---IDYNEDTGEGTGFVFEGYNADAL  432 (476)
T ss_pred             EEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceE---eCCcCCCCCCCeEEeCCCCHHHH
Confidence            766677788899999999999999999999999999999999999999999999   7776      9999999999999


Q ss_pred             HHHHhHhhc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 016648          310 LSKLEPLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       310 ~~~i~~ll~---~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~  352 (385)
                      +++|.++++   +++.+.++++++.+  +.|||+.+++++. ++|+
T Consensus       433 ~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~y~  475 (476)
T cd03791         433 LAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL-ELYR  475 (476)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHHh
Confidence            999999875   56666666666543  4699999999997 6876

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.5e-34  Score=258.88  Aligned_cols=289  Identities=35%  Similarity=0.596  Sum_probs=240.2

Q ss_pred             ccchHHHHHHhh--ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           49 LALSPRIISEVA--RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        49 ~~~~~~l~~~i~--~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      ......+.+.++  ..+||+||++.+..........++..++|++++.|+..........      ......+..++.+|
T Consensus        77 ~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~~~~~d  150 (377)
T cd03798          77 LLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR------LLRALLRRALRRAD  150 (377)
T ss_pred             HHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh------hHHHHHHHHHhcCC
Confidence            344567788888  9999999999776666666667777889999999997654332221      34457788899999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .+++.|+..++.+.+.+ .+..++.++|||+|...+.+......  .+. ....+.+.++++|++...||++.++++++.
T Consensus       151 ~ii~~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~  226 (377)
T cd03798         151 AVIAVSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA--RKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR  226 (377)
T ss_pred             eEEeCCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH--Hhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence            99999999999999876 46789999999999887765433211  111 124467889999999999999999999988


Q ss_pred             C----CCceEEEEeCCccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          207 L----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       207 ~----~~~~l~i~G~g~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +    ++++++++|.++..+.+.+...    ..+|.+.|+++++++..+|+.||++++|+..|++|.+++|||++|+|||
T Consensus       227 ~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI  306 (377)
T cd03798         227 LLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVV  306 (377)
T ss_pred             HHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEE
Confidence            7    3799999999887777777654    3479999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 016648          279 GVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       279 ~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~  353 (385)
                      +++.++..+++   .++.+|++++++|+++++++|.+++++++.  ++..++++.+ ++|+|+..++++. ++|++
T Consensus       307 ~~~~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~  376 (377)
T cd03798         307 ATDVGGIPEII---TDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLL-ELYRE  376 (377)
T ss_pred             EecCCChHHHh---cCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHH-HHHhh
Confidence            99999999999   888889999999999999999999999876  6667777776 6799999999997 57765

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-33  Score=256.29  Aligned_cols=272  Identities=21%  Similarity=0.223  Sum_probs=207.8

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  140 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  140 (385)
                      +.++|++|...+..  .......+..+.|++++.|+.....  ...........+..++..++.+|.++++|+..++.+.
T Consensus        84 ~~~~~~i~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~~~~--~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  159 (363)
T cd04955          84 KRDIDHVHALGPAI--APFLPLLRLKGKKVVVNMDGLEWKR--AKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLK  159 (363)
T ss_pred             cCCeEEEEecCccH--HHHHHHHHhcCCCEEEEccCcceee--cccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence            44555555555433  2233344556899999999853211  1111222334455677888999999999999999997


Q ss_pred             HhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC-CceEEEEeCCc
Q 016648          141 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP-EARIAFIGDGP  219 (385)
Q Consensus       141 ~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~-~~~l~i~G~g~  219 (385)
                      +.++.+  . .++|||+|...+.+   ......+.  ...+...++++|++.+.||++.++++++++. +++++++|+++
T Consensus       160 ~~~~~~--~-~~i~ngv~~~~~~~---~~~~~~~~--~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~  231 (363)
T cd04955         160 EKYGRD--S-TYIPYGADHVVSSE---EDEILKKY--GLEPGRYYLLVGRIVPENNIDDLIEAFSKSNSGKKLVIVGNAD  231 (363)
T ss_pred             HhcCCC--C-eeeCCCcChhhcch---hhhhHHhc--CCCCCcEEEEEecccccCCHHHHHHHHHhhccCceEEEEcCCC
Confidence            666532  3 89999999876543   11111122  2234457889999999999999999999885 69999999875


Q ss_pred             cHHHHHHHHc-----CCCeEEecccChHHHHHHHHhCcEEEEcCCC-CCCcHHHHHHHhcCCcEEEecCCCCCcccccCC
Q 016648          220 YREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ  293 (385)
Q Consensus       220 ~~~~l~~~~~-----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~-e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~  293 (385)
                      ....+.+.+.     ..+|+++|+++++++..+++.||++++||.. |++|++++|||+||+|||+|+.++..|++   .
T Consensus       232 ~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~---~  308 (363)
T cd04955         232 HNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVL---G  308 (363)
T ss_pred             CcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceee---c
Confidence            4433333222     3479999999999999999999999999998 99999999999999999999999999998   4


Q ss_pred             CCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 016648          294 DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  352 (385)
Q Consensus       294 ~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~-~~s~~~~~~~~~~~iy~  352 (385)
                      +  +|.+++++|.  ++++|.++++|++.+.++++++++.++ +|||+.+++++. ++|+
T Consensus       309 ~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~  363 (363)
T cd04955         309 D--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYE-ELYK  363 (363)
T ss_pred             C--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            3  7888886665  999999999999999999999999885 599999999997 5763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-34  Score=265.28  Aligned_cols=277  Identities=21%  Similarity=0.272  Sum_probs=216.0

Q ss_pred             hhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccccc----ccchhHHHHHHHHHHhCCeEEEcChh
Q 016648           59 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS----WLVKPMWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        59 i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      ++..++|+||++..... ..  ......+.|++++.|.  +.........    ........+++..++.+|.++++|+.
T Consensus        90 ~~~~~~Dvi~~~~~~~~-~~--~~~~~~~~~~i~~~h~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~  164 (392)
T cd03805          90 LPDEKYDVFIVDQVSAC-VP--LLKLFSPSKILFYCHF--PDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNF  164 (392)
T ss_pred             cccCCCCEEEEcCcchH-HH--HHHHhcCCcEEEEEec--ChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChh
Confidence            56679999999875332 11  2223334899999884  2221111111    12223455678889999999999999


Q ss_pred             HHHHHHHhcccCC-CcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC------
Q 016648          135 IGKDLEAARVTAA-NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL------  207 (385)
Q Consensus       135 ~~~~~~~~~~~~~-~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~------  207 (385)
                      .++.+.+.++... .++.+++||+|.+.+.+.....  ..+.....++.++++++|++.+.||++.++++++++      
T Consensus       165 ~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~--~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~  242 (392)
T cd03805         165 TASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP--DPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAE  242 (392)
T ss_pred             HHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc--cccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhccc
Confidence            9999887654322 3445999999988776543221  111122345778999999999999999999999775      


Q ss_pred             -CCceEEEEeCCcc--------HHHHHHHHcC-----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhc
Q 016648          208 -PEARIAFIGDGPY--------REELEKMFTG-----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  273 (385)
Q Consensus       208 -~~~~l~i~G~g~~--------~~~l~~~~~~-----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~  273 (385)
                       ++++++++|+++.        .+++++++.+     .+|.|.|+++.+++..+|+.||++++||..|++|++++|||+|
T Consensus       243 ~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~  322 (392)
T cd03805         243 FKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA  322 (392)
T ss_pred             ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc
Confidence             4789999998754        2556665544     4799999999999999999999999999999999999999999


Q ss_pred             CCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHH
Q 016648          274 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTI  346 (385)
Q Consensus       274 G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~  346 (385)
                      |+|||+++.++..|++   .++.+|+++++ |+++++++|.+++++++.++++++++++.+ ++|||+.+++++
T Consensus       323 G~PvI~s~~~~~~e~i---~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~  392 (392)
T cd03805         323 GKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAFAERL  392 (392)
T ss_pred             CCCEEEECCCCcHHHh---ccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence            9999999999999999   78889999876 899999999999999999999999999998 669999998763

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.9e-34  Score=259.60  Aligned_cols=288  Identities=28%  Similarity=0.396  Sum_probs=231.0

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHH-hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCe
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKL-LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  127 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  127 (385)
                      .....++.+.+++.+||+||++......... ...+. .+.|++++.|+......     .+.........+.+.+.+|.
T Consensus        66 ~~~~~~~~~~~~~~~~div~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  139 (365)
T cd03807          66 PGALLRLYKLIRRLRPDVVHTWMYHADLYGG-LAARLAGVPPVIWGIRHSDLDLG-----KKSTRLVARLRRLLSSFIPL  139 (365)
T ss_pred             HHHHHHHHHHHHhhCCCEEEeccccccHHHH-HHHHhcCCCcEEEEecCCccccc-----chhHhHHHHHHHHhccccCe
Confidence            3345678889999999999999764433332 33344 68899999999764422     12233344567778889999


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhH-hhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR-WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      ++++|+...+.+.+.+ .+.+++.++|||+|...+.+........ .+.. .+++.++++++|++.+.||++.++++++.
T Consensus       140 ~i~~s~~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~K~~~~li~a~~~  217 (365)
T cd03807         140 IVANSAAAAEYHQAIG-YPPKKIVVIPNGVDTERFSPDLDARARLREELG-LPEDTFLIGIVARLHPQKDHATLLRAAAL  217 (365)
T ss_pred             EEeccHHHHHHHHHcC-CChhheeEeCCCcCHHhcCCcccchHHHHHhcC-CCCCCeEEEEecccchhcCHHHHHHHHHH
Confidence            9999999999998864 4667899999999988776543322221 2222 23567889999999999999999999976


Q ss_pred             C----CCceEEEEeCCccHHHHHHHHc-C----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          207 L----PEARIAFIGDGPYREELEKMFT-G----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       207 ~----~~~~l~i~G~g~~~~~l~~~~~-~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      +    ++++++++|.++.....+.... .    .++.+.|..  +++..+|+.||++++|+..|++|++++|||+||+||
T Consensus       218 l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~Pv  295 (365)
T cd03807         218 LLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPV  295 (365)
T ss_pred             HHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCE
Confidence            5    5899999998877665555544 2    368889976  789999999999999999999999999999999999


Q ss_pred             EEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 016648          278 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       278 I~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~  352 (385)
                      |+++.++..+++   .+  +|++++++|+++++++|.++++|++.+.++++++++.+ ++|||+..++++. ++|+
T Consensus       296 I~~~~~~~~e~~---~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~y~  365 (365)
T cd03807         296 VATDVGDNAELV---GD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYE-ELYR  365 (365)
T ss_pred             EEcCCCChHHHh---hc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            999999999999   45  88999999999999999999999999999999999998 5699999999997 5774

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=7.6e-34  Score=268.63  Aligned_cols=283  Identities=22%  Similarity=0.292  Sum_probs=209.6

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccccccc-----chhHH--HHHHHHHHhCCeEEEcChh
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL-----VKPMW--LVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~ad~ii~~s~~  134 (385)
                      .+||+||+|.+ ..++.+..+++..|+|.+.+.|.............+.     .....  ..+..++..||.||+.|..
T Consensus       384 ~~pDlIHahy~-d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~q  462 (784)
T TIGR02470       384 GKPDLIIGNYS-DGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQ  462 (784)
T ss_pred             CCCCEEEECCC-chHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHH
Confidence            47999999997 3445567788999999999999863321111111111     00011  1245778889999999975


Q ss_pred             HHH----HHHHh-----------c----c--cCCCcEEEeeCCCCCCCCCCCCCChhh------------------Hhhh
Q 016648          135 IGK----DLEAA-----------R----V--TAANKIRIWKKGVDSESFHPRFRSSEM------------------RWRL  175 (385)
Q Consensus       135 ~~~----~~~~~-----------~----~--~~~~~i~vi~~~v~~~~~~~~~~~~~~------------------~~~~  175 (385)
                      ...    .+.++           +    +  .+..++.++|+|+|...|.|.......                  ....
T Consensus       463 Ei~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~  542 (784)
T TIGR02470       463 EIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHY  542 (784)
T ss_pred             HhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHh
Confidence            422    22211           1    1  145789999999999987664332211                  0111


Q ss_pred             c-CCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCcc------------HHHHHHHHcC----CCeE
Q 016648          176 S-NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPY------------REELEKMFTG----MPAV  234 (385)
Q Consensus       176 ~-~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~~------------~~~l~~~~~~----~~i~  234 (385)
                      . ...+++++|+++||+.+.||++.+++|+.++    ++++++|+|++..            .+.+.+++.+    .+|.
T Consensus       543 G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~  622 (784)
T TIGR02470       543 GYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIR  622 (784)
T ss_pred             CCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEE
Confidence            1 1245778999999999999999999999765    3588999997542            1233344443    3699


Q ss_pred             Eeccc-ChHHHHHHHH----hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHH
Q 016648          235 FTGML-LGEELSQAYA----SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  309 (385)
Q Consensus       235 ~~g~~-~~~~~~~~~~----~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l  309 (385)
                      +.|+. +..+..++|+    .+|++++||..|+||++++|||+||+|||+|+.||..|++   .++.+|+++++.|++++
T Consensus       623 flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV---~dg~tGfLVdp~D~eaL  699 (784)
T TIGR02470       623 WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII---QDGVSGFHIDPYHGEEA  699 (784)
T ss_pred             EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHh---cCCCcEEEeCCCCHHHH
Confidence            99975 4456555554    3579999999999999999999999999999999999999   89999999999999999


Q ss_pred             HHHHhHhh----cCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Q 016648          310 LSKLEPLL----YNQELRETMGQAARQEM-EKYDWRAATRTIRN  348 (385)
Q Consensus       310 ~~~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~  348 (385)
                      +++|.+++    .|++.+++++++|++.+ ++|||+..++++++
T Consensus       700 A~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~  743 (784)
T TIGR02470       700 AEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT  743 (784)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999876    69999999999999987 67999999999974

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=1.2e-33  Score=256.56  Aligned_cols=281  Identities=26%  Similarity=0.400  Sum_probs=220.0

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.+++.+||+||+|.+....+..+......+.|++.+.|+....          ........+.....++.++++
T Consensus        68 ~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~----------~~~~~~~~~~~~~~~~~~~~~  137 (360)
T cd04951          68 LWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEG----------GRLRMLAYRLTDFLSDLTTNV  137 (360)
T ss_pred             HHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCch----------hHHHHHHHHHHhhccCceEEE
Confidence            3457778889999999999875433332222223467899999975321          111223445566678899999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh-hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                      |+...+.+.+.+..+.+++.++|||+|...+.+..... ..+.+.. ..+++++++++|++.+.||++.++++++++   
T Consensus       138 s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~  216 (360)
T cd04951         138 SKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALG-VKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSD  216 (360)
T ss_pred             cHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcC-cCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhh
Confidence            99999999888766778999999999988765543221 1222222 245678899999999999999999999876   


Q ss_pred             -CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          208 -PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       208 -~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                       ++++++|+|+|+..+.+++...+    .++.+.|++  +++..+|+.||++++||..|++|++++|||++|+|||+++.
T Consensus       217 ~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~  294 (360)
T cd04951         217 YLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDA  294 (360)
T ss_pred             CCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecC
Confidence             47999999999988877776653    369999987  78999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 016648          283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       283 ~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~  352 (385)
                      ++..+++   .+  +|..++++|++++++++.++++ +++.++.+..+ ++.+ ++|||+.+++++. ++|+
T Consensus       295 ~~~~e~i---~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~-~~y~  359 (360)
T cd04951         295 GGVREVV---GD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWL-TLYT  359 (360)
T ss_pred             CChhhEe---cC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHH-HHhh
Confidence            9999999   44  7888899999999999999994 55666666655 6665 6799999999997 6886

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-33  Score=257.19  Aligned_cols=294  Identities=34%  Similarity=0.576  Sum_probs=233.5

Q ss_pred             cccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccc--ccccchhHH-HHHHHHHHh
Q 016648           48 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT--FSWLVKPMW-LVIKFLHRA  124 (385)
Q Consensus        48 ~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~  124 (385)
                      .+.....+.+.+++.+||+||++++......+...++..++|++++.|+.+........  ......... ..++.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (374)
T cd03817          69 PLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNR  148 (374)
T ss_pred             cccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhh
Confidence            34445566667889999999999875555556667788899999999987643221111  111111122 467888999


Q ss_pred             CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHH
Q 016648          125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM  204 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~  204 (385)
                      +|.++++|+.+++.+.+.+.  ..++.++|||+|...+.+...... +.+.. ..+++++++++|++.+.||++.+++++
T Consensus       149 ~d~i~~~s~~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~~~  224 (374)
T cd03817         149 CDAVIAPSEKIADLLREYGV--KRPIEVIPTGIDLDRFEPVDGDDE-RRKLG-IPEDEPVLLYVGRLAKEKNIDFLIRAF  224 (374)
T ss_pred             CCEEEeccHHHHHHHHhcCC--CCceEEcCCccchhccCccchhHH-HHhcC-CCCCCeEEEEEeeeecccCHHHHHHHH
Confidence            99999999999999887653  356999999999887765432211 22221 245678899999999999999999999


Q ss_pred             HhC----CCceEEEEeCCccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          205 DRL----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       205 ~~~----~~~~l~i~G~g~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      +.+    ++++++++|.++..+.+++...    ..++.+.|+++++++..+|+.||++++|+..|++|.+++|||+||+|
T Consensus       225 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~P  304 (374)
T cd03817         225 ARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLP  304 (374)
T ss_pred             HHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCc
Confidence            876    5799999999988777777653    23799999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       277 vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                      ||+++.++..+++   .++.+|+++++++. ++++++.+++++++.++++++++++.+++++   ..+++. .+|++
T Consensus       305 vI~~~~~~~~~~i---~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~  373 (374)
T cd03817         305 VVAVDAPGLPDLV---ADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNAEESAEKFS---FAKKVE-KLYEE  373 (374)
T ss_pred             EEEeCCCChhhhe---ecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHHHHH-HHHhc
Confidence            9999999999999   88899999998777 9999999999999999999999999997766   445553 45553

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=7.8e-34  Score=256.77  Aligned_cols=274  Identities=20%  Similarity=0.195  Sum_probs=212.7

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCE--EEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI--VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~--v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      ...++.+.+++.+||+||+|++... +.+..+++..+.|+  +.+.|......    .   .      .....+..+|.+
T Consensus        72 ~~~~l~~~l~~~~~Dii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~~~~----~---~------~~~~~~~~~d~~  137 (359)
T PRK09922         72 HVYNFSKWLKETQPDIVICIDVISC-LYANKARKKSGKQFKIFSWPHFSLDHK----K---H------AECKKITCADYH  137 (359)
T ss_pred             HHHHHHHHHHhcCCCEEEEcCHHHH-HHHHHHHHHhCCCCeEEEEecCccccc----c---h------hhhhhhhcCCEE
Confidence            3567889999999999999986433 33444555566654  44445322110    0   0      011123789999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecc--ccccHHHHHHHHHh
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG--VEKSLDFLKRVMDR  206 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~--~~k~~~~l~~a~~~  206 (385)
                      +++|+..++.+.+.+ .+.+++.++|||+|.+.+.....          ..+++++++++|++.  ..||++.+++++..
T Consensus       138 i~~S~~~~~~~~~~~-~~~~ki~vi~N~id~~~~~~~~~----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~  206 (359)
T PRK09922        138 LAISSGIKEQMMARG-ISAQRISVIYNPVEIKTIIIPPP----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ  206 (359)
T ss_pred             EEcCHHHHHHHHHcC-CCHHHEEEEcCCCCHHHccCCCc----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence            999999999998764 46678999999998654322111          123567899999986  45999999999988


Q ss_pred             C-CCceEEEEeCCccHHHHHHHHcC----CCeEEecccCh--HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          207 L-PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLG--EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       207 ~-~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      + ++++++++|+|++.+.+++.+++    .+|.|+|++++  +++.++|+.+|++++||..||+|++++|||+||+|||+
T Consensus       207 ~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~  286 (359)
T PRK09922        207 TTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCIS  286 (359)
T ss_pred             hCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEE
Confidence            7 47999999999988888887764    36999999855  78999999999999999999999999999999999999


Q ss_pred             ec-CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          280 VR-AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       280 s~-~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ++ .++..|++   .++.+|++++++|+++++++|.++++|++.+  ......+.+.+|+.+...+++. .+|+.++
T Consensus       287 s~~~~g~~eiv---~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  357 (359)
T PRK09922        287 SDCMSGPRDII---KPGLNGELYTPGNIDEFVGKLNKVISGEVKY--QHDAIPNSIERFYEVLYFKNLN-NALFSKL  357 (359)
T ss_pred             eCCCCChHHHc---cCCCceEEECCCCHHHHHHHHHHHHhCcccC--CHHHHHHHHHHhhHHHHHHHHH-HHHHHHh
Confidence            99 89999999   8899999999999999999999999998754  1223333457788889999986 6777664

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.1e-34  Score=260.31  Aligned_cols=281  Identities=27%  Similarity=0.407  Sum_probs=228.8

Q ss_pred             hccCCCEEEeCCC-chhHHHHHHHHHHhCCCEEEEEecCCCcccccccc----cccchhHHHHHHHHHHhCCeEEEcChh
Q 016648           60 ARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF----SWLVKPMWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        60 ~~~~pDiI~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      +..+||+||++++ ..........++..++|+++++|+.++........    ....+....+++..++.+|.++++|+.
T Consensus        96 ~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~  175 (394)
T cd03794          96 RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPG  175 (394)
T ss_pred             cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHH
Confidence            3789999999984 33344455566667999999999976654322111    111144566788899999999999999


Q ss_pred             HHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC---Cce
Q 016648          135 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP---EAR  211 (385)
Q Consensus       135 ~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~---~~~  211 (385)
                      ..+.+.. .+.+..++.++|||++...+.+...... ..+ ....+++..++++|++...||++.++++++.+.   +++
T Consensus       176 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~  252 (394)
T cd03794         176 MREYLVR-RGVPPEKISVIPNGVDLELFKPPPADES-LRK-ELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIR  252 (394)
T ss_pred             HHHHHHh-cCCCcCceEEcCCCCCHHHcCCccchhh-hhh-ccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeE
Confidence            9999983 3446789999999999877655433221 111 123456788999999999999999999998873   799


Q ss_pred             EEEEeCCccHHHHHHHHc---CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCC-----cHHHHHHHhcCCcEEEecCC
Q 016648          212 IAFIGDGPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVMPSESETL-----GLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       212 l~i~G~g~~~~~l~~~~~---~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~-----~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ++++|.|+..+.+.+...   ..++.+.|+++.+++.++|+.||++++|+..+++     |++++|||++|+|||+++.+
T Consensus       253 l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~  332 (394)
T cd03794         253 FLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDG  332 (394)
T ss_pred             EEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCC
Confidence            999999988877776432   2479999999999999999999999999997754     88999999999999999999


Q ss_pred             CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH-hCCHHHHHHHH
Q 016648          284 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTI  346 (385)
Q Consensus       284 ~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~-~~s~~~~~~~~  346 (385)
                      +..+.+   .++.+|++++++|+++++++|.++++|++.++++++++++.+. +|||+.+++++
T Consensus       333 ~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         333 ESAELV---EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERL  393 (394)
T ss_pred             Cchhhh---ccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence            999999   7778999999999999999999999999999999999999985 79999999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.6e-33  Score=253.11  Aligned_cols=281  Identities=24%  Similarity=0.318  Sum_probs=216.2

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCc-hh----HHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHh
Q 016648           50 ALSPRIISEVARFKPDIIHASSPG-IM----VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  124 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~-~~----~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (385)
                      .....+.+.+++.+||+||++.+. ..    ........+..++|+|+++|+..+...        ........+.+++.
T Consensus        63 ~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--------~~~~~~~~~~~~~~  134 (366)
T cd03822          63 LDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEP--------RPGDRALLRLLLRR  134 (366)
T ss_pred             hhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcccc--------chhhhHHHHHHHhc
Confidence            345677888999999999998731 11    111112223479999999999621111        11223466778899


Q ss_pred             CCeEEEcC-hhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHH
Q 016648          125 ADLTLVPS-VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRV  203 (385)
Q Consensus       125 ad~ii~~s-~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a  203 (385)
                      +|.++++| +...+.+...+   .+++.++||+++...+......     +......++++++++|++.+.||++.++++
T Consensus       135 ~d~ii~~s~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a  206 (366)
T cd03822         135 ADAVIVMSSELLRALLLRAY---PEKIAVIPHGVPDPPAEPPESL-----KALGGLDGRPVLLTFGLLRPYKGLELLLEA  206 (366)
T ss_pred             CCEEEEeeHHHHHHHHhhcC---CCcEEEeCCCCcCcccCCchhh-----HhhcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence            99999996 33333333221   4699999999997766543211     111234567899999999999999999999


Q ss_pred             HHhC----CCceEEEEeCCccHHH---------HHHHHcCCCeEEecc-cChHHHHHHHHhCcEEEEcCCCC--CCcHHH
Q 016648          204 MDRL----PEARIAFIGDGPYREE---------LEKMFTGMPAVFTGM-LLGEELSQAYASGDVFVMPSESE--TLGLVV  267 (385)
Q Consensus       204 ~~~~----~~~~l~i~G~g~~~~~---------l~~~~~~~~i~~~g~-~~~~~~~~~~~~adi~v~ps~~e--~~~~~~  267 (385)
                      ++.+    ++++++++|.+.....         +++.....+|.++|. ++.+++..+|+.||++++||..|  ++|.++
T Consensus       207 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~  286 (366)
T cd03822         207 LPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVL  286 (366)
T ss_pred             HHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHH
Confidence            9765    5899999997653222         223323447999987 99999999999999999999999  999999


Q ss_pred             HHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          268 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       268 ~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      +|||++|+|||+++.++ .+.+   .++.+|++++++|+++++++|..+++|++.+.++++++++.+++|||+.+++++.
T Consensus       287 ~Ea~a~G~PvI~~~~~~-~~~i---~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  362 (366)
T cd03822         287 AYAIGFGKPVISTPVGH-AEEV---LDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYARAMSWERVAERYL  362 (366)
T ss_pred             HHHHHcCCCEEecCCCC-hhee---eeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            99999999999999999 6666   6788999999999999999999999999999999999999997799999999997


Q ss_pred             HHHH
Q 016648          348 NEQY  351 (385)
Q Consensus       348 ~~iy  351 (385)
                       .+|
T Consensus       363 -~~~  365 (366)
T cd03822         363 -RLL  365 (366)
T ss_pred             -HHh
Confidence             565

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=1.2e-33  Score=257.24  Aligned_cols=271  Identities=19%  Similarity=0.291  Sum_probs=204.5

Q ss_pred             hhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHH
Q 016648           59 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  138 (385)
Q Consensus        59 i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~  138 (385)
                      +...+||+||+|++....+  ....+..++|+|++.|.......         ...+...+..++++|.+++.+..   .
T Consensus        81 ~~~~~~Dvv~~h~~~~~~~--~~~~~~~~~~~i~~~H~~~~~~~---------~~~~~~~~~~~~~~d~~i~~~~~---~  146 (372)
T cd03792          81 LLDLDADVVVIHDPQPLAL--PLFKKKRGRPWIWRCHIDLSSPN---------RRVWDFLQPYIEDYDAAVFHLPE---Y  146 (372)
T ss_pred             cccCCCCEEEECCCCchhH--HHhhhcCCCeEEEEeeeecCCCc---------HHHHHHHHHHHHhCCEEeecHHH---h
Confidence            3467999999998754322  22233348999999998543211         12233456678889999988832   2


Q ss_pred             HHHhcccCCCcEEEeeCCCCCCCCCC-CCCC---hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCc
Q 016648          139 LEAARVTAANKIRIWKKGVDSESFHP-RFRS---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEA  210 (385)
Q Consensus       139 ~~~~~~~~~~~i~vi~~~v~~~~~~~-~~~~---~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~  210 (385)
                      . ..+ .+..++ ++|||+|...... ....   ...+.+.. ..+++++++++||+.+.||++.++++++.+    +++
T Consensus       147 ~-~~~-~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~  222 (372)
T cd03792         147 V-PPQ-VPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYG-IDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDP  222 (372)
T ss_pred             c-CCC-CCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhC-CCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCC
Confidence            2 222 234455 9999999753211 1111   12222322 245788999999999999999999998765    679


Q ss_pred             eEEEEeCCccH-----HHHHHHH----cCCCeEEeccc--ChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          211 RIAFIGDGPYR-----EELEKMF----TGMPAVFTGML--LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       211 ~l~i~G~g~~~-----~~l~~~~----~~~~i~~~g~~--~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      +++++|+|+..     +.++++.    ...++.+.|..  +.+++..+|+.||++++||..||+|++++|||+||+|||+
T Consensus       223 ~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~  302 (372)
T cd03792         223 QLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIA  302 (372)
T ss_pred             EEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEE
Confidence            99999987531     1223322    12368898886  8899999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~  353 (385)
                      |+.++..+.+   .++.+|++++  +.++++++|.++++|++.+++|++++++.+ ++|+|+.++++++ .+|++
T Consensus       303 s~~~~~~~~i---~~~~~g~~~~--~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~-~~~~~  371 (372)
T cd03792         303 GPVGGIPLQI---EDGETGFLVD--TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYL-YLISK  371 (372)
T ss_pred             cCCCCchhhc---ccCCceEEeC--CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-HHHHh
Confidence            9999999999   8899999887  678899999999999999999999999987 6799999999998 68775

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-33  Score=254.26  Aligned_cols=292  Identities=27%  Similarity=0.356  Sum_probs=221.5

Q ss_pred             HHHHHhhccCCCEEEeCCCchhHHHHHHHHHH-hCCCEEEEEecCCCccccc----cccc-----------------ccc
Q 016648           54 RIISEVARFKPDIIHASSPGIMVFGALIIAKL-LCVPIVMSYHTHVPVYIPR----YTFS-----------------WLV  111 (385)
Q Consensus        54 ~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~----~~~~-----------------~~~  111 (385)
                      .+.+.+++.+||+||+|+.....+....+.+. .++|+|+++|+.++.....    ....                 ...
T Consensus        42 ~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (365)
T cd03825          42 ALISKIEIINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLS  121 (365)
T ss_pred             hhhhChhcccCCEEEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHH
Confidence            55677788999999999753332222222233 4999999999965432110    0000                 011


Q ss_pred             h-hHHHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEee
Q 016648          112 K-PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR  190 (385)
Q Consensus       112 ~-~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~  190 (385)
                      . ............++.++++|+...+.+.+.+..+..++.++|||+|.+.+.+... ...+.... .+++..++++.|+
T Consensus       122 ~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~~~  199 (365)
T cd03825         122 RWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDK-REARKRLG-LPADKKIILFGAV  199 (365)
T ss_pred             HHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcH-HHHHHHhC-CCCCCeEEEEEec
Confidence            1 1111222233567889999999999998887667789999999999987755422 22222222 2344566666666


Q ss_pred             ccc--cccHHHHHHHHHhC-----CCceEEEEeCCccHHHHHHHHcCCCeEEecccC-hHHHHHHHHhCcEEEEcCCCCC
Q 016648          191 LGV--EKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESET  262 (385)
Q Consensus       191 ~~~--~k~~~~l~~a~~~~-----~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~-~~~~~~~~~~adi~v~ps~~e~  262 (385)
                      ...  .||++.++++++.+     ++++++++|+++.....   ....++.++|+++ .+++..+|+.||++++||..|+
T Consensus       200 ~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~  276 (365)
T cd03825         200 GGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP---DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQEN  276 (365)
T ss_pred             CCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc---cCCCceEecCCcCCHHHHHHHHHhCCEEEecccccc
Confidence            655  89999999999876     46889999987654321   2244799999999 6789999999999999999999


Q ss_pred             CcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHH
Q 016648          263 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRA  341 (385)
Q Consensus       263 ~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~  341 (385)
                      +|.+++|||++|+|||+++.++..+++   .++.+|++++..|++++++++.++++|++.+.++++++++.+ ++|||+.
T Consensus       277 ~g~~~~Eam~~g~PvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~  353 (365)
T cd03825         277 FPNTAIEALACGTPVVAFDVGGIPDIV---DHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRV  353 (365)
T ss_pred             ccHHHHHHHhcCCCEEEecCCCChhhe---eCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence            999999999999999999999999999   788899999999999999999999999999999999999998 5699999


Q ss_pred             HHHHHHHHHHHHH
Q 016648          342 ATRTIRNEQYNAA  354 (385)
Q Consensus       342 ~~~~~~~~iy~~~  354 (385)
                      +++++. .+|+++
T Consensus       354 ~~~~~~-~~y~~~  365 (365)
T cd03825         354 QAKRYL-SLYEEL  365 (365)
T ss_pred             HHHHHH-HHHhhC
Confidence            999997 688763

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.6e-33  Score=251.72  Aligned_cols=271  Identities=25%  Similarity=0.403  Sum_probs=222.2

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+++++.+||+||++.+..........++..++|+++++|+.+......              .......|.+++
T Consensus        84 ~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~--------------~~~~~~~d~ii~  149 (359)
T cd03823          84 VVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQ--------------GLFKKGGDAVIA  149 (359)
T ss_pred             HHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchh--------------hhhccCCCEEEE
Confidence            355677888999999999998755555455566778899999999865322111              112233499999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC--
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP--  208 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~--  208 (385)
                      +|+...+.+.+.+. +..++.+++||+|...+.+...         ....++++++++|++...||++.++++++.++  
T Consensus       150 ~s~~~~~~~~~~~~-~~~~~~vi~n~~~~~~~~~~~~---------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~  219 (359)
T cd03823         150 PSRFLLDRYVANGL-FAEKISVIRNGIDLDRAKRPRR---------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRG  219 (359)
T ss_pred             eCHHHHHHHHHcCC-CccceEEecCCcChhhcccccc---------CCCCCceEEEEEecCccccCHHHHHHHHHHHHhc
Confidence            99999999988765 3578999999999887654321         12456788999999999999999999999885  


Q ss_pred             CceEEEEeCCccHHHHHHHH-cCCCeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHHhcCCcEEEecCCCCC
Q 016648          209 EARIAFIGDGPYREELEKMF-TGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIP  286 (385)
Q Consensus       209 ~~~l~i~G~g~~~~~l~~~~-~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~s~~~~~~  286 (385)
                      +++++++|.+.......... ...++.+.|+++.+++.++|+.||++++||. .|++|++++|||+||+|||+++.++..
T Consensus       220 ~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~  299 (359)
T cd03823         220 DIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMA  299 (359)
T ss_pred             CcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHH
Confidence            89999999887655443322 2347999999999999999999999999998 799999999999999999999999999


Q ss_pred             cccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 016648          287 DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       287 e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~  352 (385)
                      +++   .++.+|++++++|++++++++.++++|++.++++++++++..+.   +.+++++. ++|+
T Consensus       300 e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~  358 (359)
T cd03823         300 ELV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEPPRSI---EDQAEEYL-KLYR  358 (359)
T ss_pred             HHh---cCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHHHhhhH---HHHHHHHH-HHhh
Confidence            999   78889999999999999999999999999999999988876544   88888886 5775

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PLN00142 sucrose synthase

Probab=100.00  E-value=5.5e-33  Score=262.80  Aligned_cols=283  Identities=20%  Similarity=0.242  Sum_probs=209.9

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccccc-----ccchhH--HHHHHHHHHhCCeEEEcChh
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS-----WLVKPM--WLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~ad~ii~~s~~  134 (385)
                      .+||+||.|.+ ..++.+..+++..|+|.+.+.|.............     ......  ...+..++..||.||+.|..
T Consensus       407 ~~PDlIHaHYw-dsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~q  485 (815)
T PLN00142        407 GKPDLIIGNYS-DGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQ  485 (815)
T ss_pred             CCCCEEEECCc-cHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHH
Confidence            36999999986 44566778899999999999997532211110000     000111  12467788899999999977


Q ss_pred             HHHH-------HHHhc------------c--cCCCcEEEeeCCCCCCCCCCCCCChhh------------------Hhhh
Q 016648          135 IGKD-------LEAAR------------V--TAANKIRIWKKGVDSESFHPRFRSSEM------------------RWRL  175 (385)
Q Consensus       135 ~~~~-------~~~~~------------~--~~~~~i~vi~~~v~~~~~~~~~~~~~~------------------~~~~  175 (385)
                      ....       +..+.            +  ....++.++|+|+|...|.|.......                  ....
T Consensus       486 Ei~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~l  565 (815)
T PLN00142        486 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHI  565 (815)
T ss_pred             HHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHh
Confidence            6642       22221            1  114589999999999977653321110                  1112


Q ss_pred             cC-CCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCc------cH------HHHHHHHcC----CCeE
Q 016648          176 SN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGP------YR------EELEKMFTG----MPAV  234 (385)
Q Consensus       176 ~~-~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~------~~------~~l~~~~~~----~~i~  234 (385)
                      .. ..+++++|+++||+.+.||++.+++|+.++    ++++++|+|++.      ..      ..+.+++.+    .+|.
T Consensus       566 g~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~  645 (815)
T PLN00142        566 GYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFR  645 (815)
T ss_pred             CCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEE
Confidence            11 234567999999999999999999999765    468999999762      11      223444443    3588


Q ss_pred             Eeccc----ChHHHHHHHHh-CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHH
Q 016648          235 FTGML----LGEELSQAYAS-GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  309 (385)
Q Consensus       235 ~~g~~----~~~~~~~~~~~-adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l  309 (385)
                      +.|..    +.+++..+++. +|++++||..|+||++++|||+||+|||+|+.||..|++   .++.+|++++++|++++
T Consensus       646 flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV---~dG~tG~LV~P~D~eaL  722 (815)
T PLN00142        646 WIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII---VDGVSGFHIDPYHGDEA  722 (815)
T ss_pred             EcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHh---cCCCcEEEeCCCCHHHH
Confidence            88854    33677777774 799999999999999999999999999999999999999   89999999999999999


Q ss_pred             HHHHhHh----hcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Q 016648          310 LSKLEPL----LYNQELRETMGQAARQEM-EKYDWRAATRTIRN  348 (385)
Q Consensus       310 ~~~i~~l----l~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~  348 (385)
                      +++|.++    ++|++.+++++++|++.+ ++|||+..++++++
T Consensus       723 A~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~  766 (815)
T PLN00142        723 ANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLT  766 (815)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            9998764    479999999999999998 67999999999984

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-32  Score=249.59  Aligned_cols=279  Identities=27%  Similarity=0.380  Sum_probs=225.3

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHH-HhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAK-LLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....+.+.+++.+||+||++......+..+ .++ ..+.+++...|+.........   ........+++...+.+|.++
T Consensus        68 ~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~ii  143 (359)
T cd03808          68 ALLRLYRLLRKERPDIVHTHTPKPGILGRL-AARLAGVPKVIYTVHGLGFVFTSGG---LKRRLYLLLERLALRFTDKVI  143 (359)
T ss_pred             HHHHHHHHHHhcCCCEEEEccccchhHHHH-HHHHcCCCCEEEEecCcchhhccch---hHHHHHHHHHHHHHhhccEEE
Confidence            355678888999999999997644333333 333 456677888887643322221   133445567788899999999


Q ss_pred             EcChhHHHHHHHhcccC-CCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-
Q 016648          130 VPSVAIGKDLEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~-~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-  207 (385)
                      +.|+...+.+.+.+..+ ..++.+.+++++...+.+....         ..++++.++++|++.+.||++.++++++.+ 
T Consensus       144 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~  214 (359)
T cd03808         144 FQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP---------IPEDDPVFLFVARLLKDKGIDELLEAARILK  214 (359)
T ss_pred             EcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc---------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence            99999999999887543 4677888999988776544221         134678999999999999999999999876 


Q ss_pred             ---CCceEEEEeCCccHHHHHH-----HHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 ---PEARIAFIGDGPYREELEK-----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ---~~~~l~i~G~g~~~~~l~~-----~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                         ++++++++|.++.......     .....+|.+.|+.  +++.++|+.||++++|+..|++|++++|||++|+|||+
T Consensus       215 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~  292 (359)
T cd03808         215 AKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIA  292 (359)
T ss_pred             hcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeecc--ccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEE
Confidence               6799999998775544432     2223479999994  89999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      ++.++..+++   .++.+|++++++|+++++++|.+++.|++.+.++++++++.+ ++|+|+.+++++.
T Consensus       293 s~~~~~~~~i---~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  358 (359)
T cd03808         293 TDVPGCREAV---IDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL  358 (359)
T ss_pred             ecCCCchhhh---hcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            9999999999   788999999999999999999999999999999999999996 7799999998874

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-32  Score=250.97  Aligned_cols=282  Identities=27%  Similarity=0.383  Sum_probs=218.3

Q ss_pred             HHHHhhccCCCEEEeCCC-chhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchh--HHHHHHHHHHhCCeEEEc
Q 016648           55 IISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKP--MWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        55 l~~~i~~~~pDiI~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ad~ii~~  131 (385)
                      ........+||+||+|+. ..........++..++|++++.|+........  .....+.  .....+...+.++.+++.
T Consensus        79 ~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~  156 (375)
T cd03821          79 AWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP--HKALKKRLAWFLFERRLLQAAAAVHAT  156 (375)
T ss_pred             HHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc--cchhhhHHHHHHHHHHHHhcCCEEEEC
Confidence            334445678999999984 33344445566778999999999875443211  1111111  123456778889999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----  207 (385)
                      |...........  +..++.++|||+|.+.+.+...... +.. ....+++++++++|++.+.||++.++++++.+    
T Consensus       157 s~~~~~~~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~  232 (375)
T cd03821         157 SEQEAAEIRRLG--LKAPIAVIPNGVDIPPFAALPSRGR-RRK-FPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERF  232 (375)
T ss_pred             CHHHHHHHHhhC--CcccEEEcCCCcChhccCcchhhhh-hhh-ccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhc
Confidence            987777776543  4678999999999887765432221 111 12345778999999999999999999999876    


Q ss_pred             CCceEEEEeCCcc--HHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          208 PEARIAFIGDGPY--REELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       208 ~~~~l~i~G~g~~--~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      ++++++++|.+..  ...++..+.    ..+|.++|+++++++..+|+.||++++||..|++|++++|||+||+|||+++
T Consensus       233 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~  312 (375)
T cd03821         233 PDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTD  312 (375)
T ss_pred             CCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcC
Confidence            5799999996543  333333222    3479999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      .++..+++   .+ ..|++++. +.++++++|.+++++++.++++++++++.+ ++|+|+.++++++
T Consensus       313 ~~~~~~~~---~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  374 (375)
T cd03821         313 KVPWQELI---EY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL  374 (375)
T ss_pred             CCCHHHHh---hc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            99999999   66 78887765 559999999999999999999999999996 7799999999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=7.7e-33  Score=244.11  Aligned_cols=238  Identities=16%  Similarity=0.198  Sum_probs=184.4

Q ss_pred             HHhCCCEEEEEecCCCcccccccccccchhHHHHHHHH-HHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCC
Q 016648           84 KLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF  162 (385)
Q Consensus        84 ~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~  162 (385)
                      ...|+|+++++|+..             +....++.+. .+.+|.++++|+.+++.+.+.+....+++.+||||+|.+.|
T Consensus        66 ~~~~~~~v~e~~~~~-------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f  132 (331)
T PHA01630         66 PHVGKNIVFEVADTD-------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMF  132 (331)
T ss_pred             cccCCceEEEEEeec-------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHc
Confidence            446889999999821             1122355666 68899999999999999987754224689999999998877


Q ss_pred             CCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCccHHHHHHHHcCCCeEEecc
Q 016648          163 HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMPAVFTGM  238 (385)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~  238 (385)
                      .+...          ...+..++++.|++.+.||++.+++|++.+    ++++++++|++.....+..    . ..+.+.
T Consensus       133 ~~~~~----------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~~----~-~~~~~~  197 (331)
T PHA01630        133 EYKPK----------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLFG----L-NGVKTP  197 (331)
T ss_pred             CCCcc----------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhcc----c-cceecc
Confidence            54421          122455677888899999999999999876    5789999997654332211    1 113566


Q ss_pred             cChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCC---------------
Q 016648          239 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP---------------  303 (385)
Q Consensus       239 ~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~---------------  303 (385)
                      ++.+++..+|+.||++++||..|+||++++||||||+|||+|+.++..|++   .++.+|++++.               
T Consensus       198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i---~~~~ng~lv~~~~~~~~~~~~~~~~G  274 (331)
T PHA01630        198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWV---LSNLDVYWIKSGRKPKLWYTNPIHVG  274 (331)
T ss_pred             CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhc---cCCCceEEeeecccccccccCCcccc
Confidence            999999999999999999999999999999999999999999999999999   77777666542               


Q ss_pred             ----CCHHHHHHHHhHhhcCH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          304 ----GDLDDCLSKLEPLLYNQ---ELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       304 ----~~~~~l~~~i~~ll~~~---~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                          .|.+++++++.+++.|+   +.++.+..+++...++|||+++++++. ++|++
T Consensus       275 ~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~-~l~~~  330 (331)
T PHA01630        275 YFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWE-KILEK  330 (331)
T ss_pred             cccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHhc
Confidence                27788889998988863   444555555555568899999999997 68764

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.2e-33  Score=252.78  Aligned_cols=270  Identities=23%  Similarity=0.283  Sum_probs=208.6

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCE-EEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI-VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~-v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      +...+.+.+++.+||+||+|.+....+.. .+.+..+.|. +++.|+.........  ...  ......+.+.+.+|.++
T Consensus        68 ~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~i  142 (358)
T cd03812          68 YFKKLYKLIKKNKYDIVHVHGSSASGFIL-LAAKKAGVKVRIAHSHNTSDSHDKKK--KIL--KYKVLRKLINRLATDYL  142 (358)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCcchhHHHH-HHHhhCCCCeEEEEeccccccccccc--hhh--HHHHHHHHHHhcCCEEE
Confidence            45677778889999999999875433333 3444466665 556676432221111  100  01345677888999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC--
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--  207 (385)
                      ++|+...+.+...  ....++.++|||+|.+.+.+.......+.+ ....+++++|+|+|++.+.||++.+++++..+  
T Consensus       143 ~~s~~~~~~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~-~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~  219 (358)
T cd03812         143 ACSEEAGKWLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKKRRE-LGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLK  219 (358)
T ss_pred             EcCHHHHHHHHhC--CCcccEEEEeccCcHHHcCCCchhhhHHHH-cCCCCCCEEEEEEeccccccChHHHHHHHHHHHH
Confidence            9999999998776  356799999999998877654332222222 22345778999999999999999999999876  


Q ss_pred             --CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          208 --PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       208 --~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                        ++++++++|+|+..+.+++.+.+    .++.+.|+  .+++.++|+.||++|+||..|++|++++|||++|+|||+|+
T Consensus       220 ~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~  297 (358)
T cd03812         220 KNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSD  297 (358)
T ss_pred             hCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEc
Confidence              58999999999988777776643    36999999  48899999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                      .++..+.+   .+ ..+++..++++++++++|.++++|++.++.+...+....
T Consensus       298 ~~~~~~~i---~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~  346 (358)
T cd03812         298 TITKEVDL---TD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL  346 (358)
T ss_pred             CCchhhhh---cc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence            99999999   66 456666677889999999999999998888777666544

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-33  Score=251.36  Aligned_cols=266  Identities=24%  Similarity=0.336  Sum_probs=209.7

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCC-------cccccccc------cccchhHHHHH
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP-------VYIPRYTF------SWLVKPMWLVI  118 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-------~~~~~~~~------~~~~~~~~~~~  118 (385)
                      ...+.+.+...++|+|++++......    +....+.|.+.++|....       ........      ......++..+
T Consensus        72 ~~~~~~~~~~~~~D~v~~~~~~~~~~----~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (351)
T cd03804          72 MPLAIEQFDLSGYDLVISSSHAVAKG----VITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWD  147 (351)
T ss_pred             hhHHHHhccccCCCEEEEcCcHHhcc----ccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHH
Confidence            44455666778999999987522211    114567888888886311       11111000      11223344566


Q ss_pred             HHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHH
Q 016648          119 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  198 (385)
Q Consensus       119 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~  198 (385)
                      +..++++|.++++|+.+++.+.+.++   .+..+++||+|.+.+.+..             .....++++|++.+.||++
T Consensus       148 ~~~~~~~d~ii~~S~~~~~~~~~~~~---~~~~vi~~~~d~~~~~~~~-------------~~~~~il~~G~~~~~K~~~  211 (351)
T cd03804         148 RRSAARVDYFIANSRFVARRIKKYYG---RDATVIYPPVDTDRFTPAE-------------EKEDYYLSVGRLVPYKRID  211 (351)
T ss_pred             HHHhcCCCEEEECCHHHHHHHHHHhC---CCcEEECCCCCHhhcCcCC-------------CCCCEEEEEEcCccccChH
Confidence            77789999999999999999987764   3567899999987765431             2345799999999999999


Q ss_pred             HHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          199 FLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       199 ~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      .++++++.++ .+++|+|+|+..+.+++ ....+|++.|+++++++.++|+.||++++|+. |++|++++|||+||+|||
T Consensus       212 ~li~a~~~~~-~~l~ivG~g~~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi  288 (351)
T cd03804         212 LAIEAFNKLG-KRLVVIGDGPELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVI  288 (351)
T ss_pred             HHHHHHHHCC-CcEEEEECChhHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEE
Confidence            9999999998 99999999988777777 34568999999999999999999999999999 999999999999999999


Q ss_pred             EecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 016648          279 GVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  346 (385)
Q Consensus       279 ~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  346 (385)
                      +++.++..+++   .++.+|++++++|+++++++|..+++|++   .+.+++++.+++|+|++..+++
T Consensus       289 ~~~~~~~~e~i---~~~~~G~~~~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~  350 (351)
T cd03804         289 AYGKGGALETV---IDGVTGILFEEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI  350 (351)
T ss_pred             EeCCCCCccee---eCCCCEEEeCCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence            99999999999   88899999999999999999999999874   2344455556789999988765

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=2.4e-32  Score=250.74  Aligned_cols=228  Identities=16%  Similarity=0.238  Sum_probs=186.8

Q ss_pred             HHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccccc
Q 016648          117 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  196 (385)
Q Consensus       117 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  196 (385)
                      +++...+.+|.++++|+++++.+.+.++. .+++.++++|++...+......         ..+++..++++|++.++||
T Consensus       213 l~~~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~~~~---------~~~~~~~il~vGR~~~~Kg  282 (463)
T PLN02949        213 MYGLVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQALPLE---------RSEDPPYIISVAQFRPEKA  282 (463)
T ss_pred             HHHHHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccCCcc---------ccCCCCEEEEEEeeeccCC
Confidence            34555688999999999999999887653 3578899999987654221110         1234578999999999999


Q ss_pred             HHHHHHHHHhC--------CCceEEEEeCCcc------HHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcC
Q 016648          197 LDFLKRVMDRL--------PEARIAFIGDGPY------REELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       197 ~~~l~~a~~~~--------~~~~l~i~G~g~~------~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      ++.+++|+.++        ++++++|+|++..      .+++++++.+    .+|.|.|+++.+++..+|+.||++++|+
T Consensus       283 ~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s  362 (463)
T PLN02949        283 HALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSM  362 (463)
T ss_pred             HHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCC
Confidence            99999998752        5789999997632      2456666553    3699999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEecCCCCC-cccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHh
Q 016648          259 ESETLGLVVLEAMSSGIPVVGVRAGGIP-DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEK  336 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~PvI~s~~~~~~-e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~  336 (385)
                      ..|+||++++|||++|+|||+++.+|.. +++.+..++.+|++++  |+++++++|.++++ +++.+++|++++++.+++
T Consensus       363 ~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~  440 (463)
T PLN02949        363 IDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR  440 (463)
T ss_pred             ccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998864 6662222367898875  99999999999998 578889999999999988


Q ss_pred             CCHHHHHHHHHHHHHHHHHHH
Q 016648          337 YDWRAATRTIRNEQYNAAIWF  357 (385)
Q Consensus       337 ~s~~~~~~~~~~~iy~~~~~~  357 (385)
                      |||+.+.+++. +.+++++++
T Consensus       441 FS~e~~~~~~~-~~i~~l~~~  460 (463)
T PLN02949        441 FSEQRFNEDFK-DAIRPILNS  460 (463)
T ss_pred             cCHHHHHHHHH-HHHHHHHhh
Confidence            99999999997 688888765

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.6e-32  Score=245.84  Aligned_cols=270  Identities=25%  Similarity=0.401  Sum_probs=217.1

Q ss_pred             cccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhC-CCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           48 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        48 ~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .+.....+.+.+++.+||+|+++.+....   +......+ +|++.+.|+.........       ......+..++.+|
T Consensus        68 ~~~~~~~~~~~l~~~~~d~i~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d  137 (348)
T cd03820          68 RFKKLRRLRKLLKNNKPDVVISFLTSLLT---FLASLGLKIVKLIVSEHNSPDAYKKRL-------RRLLLRRLLYRRAD  137 (348)
T ss_pred             cccchHHHHHhhcccCCCEEEEcCchHHH---HHHHHhhccccEEEecCCCccchhhhh-------HHHHHHHHHHhcCC
Confidence            44556788899999999999999875222   22233344 499999998654322111       11114788899999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .+++.|+.......   ..+..++.++||+++...+...            ...++..++++|++.+.||++.++++++.
T Consensus       138 ~ii~~s~~~~~~~~---~~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~  202 (348)
T cd03820         138 AVVVLTEEDRALYY---KKFNKNVVVIPNPLPFPPEEPS------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK  202 (348)
T ss_pred             EEEEeCHHHHHHhh---ccCCCCeEEecCCcChhhcccc------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence            99999999972222   2356789999999998765432            13467889999999999999999999987


Q ss_pred             C----CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          207 L----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       207 ~----~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +    ++++++++|.++....+.+...+.    ++.+.|+  .+++..+|+.||++++||..|++|++++|||++|+|||
T Consensus       203 l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi  280 (348)
T cd03820         203 IAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVI  280 (348)
T ss_pred             HHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEE
Confidence            6    689999999998887777655433    5889998  48999999999999999999999999999999999999


Q ss_pred             EecCCC-CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          279 GVRAGG-IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       279 ~s~~~~-~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      +++.++ ..+++   .++.+|+++++.|+++++++|.++++|++.++++++++++..++|+|+++++++.
T Consensus       281 ~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (348)
T cd03820         281 SFDCPTGPSEII---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSIENIIKQWE  347 (348)
T ss_pred             EecCCCchHhhh---ccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence            999764 45666   5667999999999999999999999999999999999988788999999998874

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.2e-33  Score=254.37  Aligned_cols=266  Identities=20%  Similarity=0.239  Sum_probs=200.2

Q ss_pred             hccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCc----ccccc-------------cccc---cch-----hH
Q 016648           60 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV----YIPRY-------------TFSW---LVK-----PM  114 (385)
Q Consensus        60 ~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~~~~-------------~~~~---~~~-----~~  114 (385)
                      .+.+||||+.+......+..  .....++|+++.+|  +|.    .....             ..+.   ..+     .+
T Consensus       104 ~~~~pDv~i~~~g~~~~~~~--~~~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~  179 (419)
T cd03806         104 LKLVPDIFIDTMGYPFTYPL--VRLLGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLF  179 (419)
T ss_pred             HhcCCCEEEEcCCcccHHHH--HHHhcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHH
Confidence            34589999988743333322  22345889999999  452    11000             0000   111     12


Q ss_pred             HHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccc
Q 016648          115 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       115 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  194 (385)
                      ..++++..+.+|.++++|+++.+.+.+.+.. .+++.+++||+|.+.+.+...         ...++..+++|+|++.+.
T Consensus       180 ~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~-~~~~~vi~~gvd~~~~~~~~~---------~~~~~~~~il~vgr~~~~  249 (419)
T cd03806         180 AFLYGLAGSFADVVMVNSTWTRNHIRSLWKR-NTKPSIVYPPCDVEELLKLPL---------DEKTRENQILSIAQFRPE  249 (419)
T ss_pred             HHHHHHHhhcCCEEEECCHHHHHHHHHHhCc-CCCcEEEcCCCCHHHhccccc---------ccccCCcEEEEEEeecCC
Confidence            2467788899999999999999999887753 358999999999876644321         013356789999999999


Q ss_pred             ccHHHHHHHHHhC----C-----CceEEEEeCCc------cHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEE
Q 016648          195 KSLDFLKRVMDRL----P-----EARIAFIGDGP------YREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       195 k~~~~l~~a~~~~----~-----~~~l~i~G~g~------~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ||++.+++|+..+    +     +++++|+|++.      ..+.+++++.+    .+|+|+|.++.+++..+|+.||+++
T Consensus       250 K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v  329 (419)
T cd03806         250 KNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIGL  329 (419)
T ss_pred             CCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEE
Confidence            9999999999876    2     48999999763      33455555543    3699999999999999999999999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCC-CCcccccCC---CCCeeEeeCCCCHHHHHHHHhHhhcCHH-HHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGG-IPDIIPEDQ---DGKIGYLFNPGDLDDCLSKLEPLLYNQE-LRETMGQAA  330 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~-~~e~~~~~~---~~~~g~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~a  330 (385)
                      +|+..|+||.+++|||+||+|||+++.++ ..+++   .   ++.+|++++  |+++++++|.+++++++ .++.+++++
T Consensus       330 ~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv---~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~  404 (419)
T cd03806         330 HTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIV---VPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAA  404 (419)
T ss_pred             ECCccCCcccHHHHHHHcCCcEEEEcCCCCchhee---eccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999866 45777   5   789999975  99999999999999655 445555555


Q ss_pred             HHHHHhCCHHHHHH
Q 016648          331 RQEMEKYDWRAATR  344 (385)
Q Consensus       331 ~~~~~~~s~~~~~~  344 (385)
                      ++..++||++...+
T Consensus       405 ~~~~~~fs~~~f~~  418 (419)
T cd03806         405 RSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHhhCHHHhcc
Confidence            55457899998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.3e-32  Score=244.60  Aligned_cols=255  Identities=20%  Similarity=0.302  Sum_probs=206.6

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      .....+.+.+++.+||+||+|+.....+    .++..++|+|++.|+........             ........+.++
T Consensus        74 ~~~~~~~~~~~~~~~Divh~~~~~~~~~----~~~~~~~~~v~~~h~~~~~~~~~-------------~~~~~~~~~~~~  136 (335)
T cd03802          74 EALALAERALAAGDFDIVHNHSLHLPLP----FARPLPVPVVTTLHGPPDPELLK-------------LYYAARPDVPFV  136 (335)
T ss_pred             HHHHHHHHHHhcCCCCEEEecCcccchh----hhcccCCCEEEEecCCCCcccch-------------HHHhhCcCCeEE
Confidence            3455677888999999999998744433    45678899999999865332111             233457788999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCC
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE  209 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~  209 (385)
                      ++|+...+.+...     .++.++|||+|.+.+.+.             ..++..++++|++.+.||++.+++++++. +
T Consensus       137 ~~s~~~~~~~~~~-----~~~~vi~ngvd~~~~~~~-------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-~  197 (335)
T cd03802         137 SISDAQRRPWPPL-----PWVATVHNGIDLDDYPFR-------------GPKGDYLLFLGRISPEKGPHLAIRAARRA-G  197 (335)
T ss_pred             EecHHHHhhcccc-----cccEEecCCcChhhCCCC-------------CCCCCEEEEEEeeccccCHHHHHHHHHhc-C
Confidence            9999988876543     689999999999877652             23566899999999999999999998874 7


Q ss_pred             ceEEEEeCCccHHHHHHHHc-----CCCeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHHhcCCcEEEecCC
Q 016648          210 ARIAFIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       210 ~~l~i~G~g~~~~~l~~~~~-----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ++++++|.++..+.+.....     ..++.+.|+++++++..+|+.+|++++||. .|++|.+++|||+||+|||+++.+
T Consensus       198 ~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~  277 (335)
T cd03802         198 IPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG  277 (335)
T ss_pred             CeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC
Confidence            99999998876554443322     357999999999999999999999999998 599999999999999999999999


Q ss_pred             CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 016648          284 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       284 ~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~  352 (385)
                      +..|++   .++.+|+++++  +++++++|.++.+.+      .+++++.+ ++|||+.+++++. .+|+
T Consensus       278 ~~~e~i---~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~~~~~~~~~~s~~~~~~~~~-~~y~  335 (335)
T cd03802         278 AVPEVV---EDGVTGFLVDS--VEELAAAVARADRLD------RAACRRRAERRFSAARMVDDYL-ALYR  335 (335)
T ss_pred             Cchhhe---eCCCcEEEeCC--HHHHHHHHHHHhccH------HHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            999999   88889999984  999999999986543      23455665 6799999999997 5774

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=100.00  E-value=1.9e-32  Score=249.72  Aligned_cols=267  Identities=23%  Similarity=0.304  Sum_probs=210.8

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  140 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  140 (385)
                      ..++|+++++.+.....  .+.......+.++++|+................... .....+.++|.+++.|+..++.+.
T Consensus        97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ii~~s~~~~~~l~  173 (372)
T cd04949          97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYE-YVFENLDKVDGVIVATEQQKQDLQ  173 (372)
T ss_pred             CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhH-HHHhChhhCCEEEEccHHHHHHHH
Confidence            47899999998754433  223334456678888975432222111111111111 222235789999999999999998


Q ss_pred             HhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEe
Q 016648          141 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIG  216 (385)
Q Consensus       141 ~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G  216 (385)
                      +.++. ..++.++|||++...+.+...          ....+..++++|++.+.||++.+++++..+    ++++++|+|
T Consensus       174 ~~~~~-~~~v~~ip~g~~~~~~~~~~~----------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G  242 (372)
T cd04949         174 KQFGN-YNPIYTIPVGSIDPLKLPAQF----------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYG  242 (372)
T ss_pred             HHhCC-CCceEEEcccccChhhcccch----------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            88763 345899999999876654310          123567899999999999999999999876    789999999


Q ss_pred             CCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC-CCCccccc
Q 016648          217 DGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG-GIPDIIPE  291 (385)
Q Consensus       217 ~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~-~~~e~~~~  291 (385)
                      .|+....+......    .+|.+.|+.  +++.++|+.||++|+||..||+|++++|||++|+|||+++.+ +..+++  
T Consensus       243 ~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v--  318 (372)
T cd04949         243 YGDEEEKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEII--  318 (372)
T ss_pred             eCchHHHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHc--
Confidence            98877766665543    358999965  789999999999999999999999999999999999999987 788999  


Q ss_pred             CCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 016648          292 DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  346 (385)
Q Consensus       292 ~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  346 (385)
                       .++.+|++++++|+++++++|..+++|++.++++++++++.+++|||+++++++
T Consensus       319 -~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w  372 (372)
T cd04949         319 -EDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW  372 (372)
T ss_pred             -ccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence             889999999999999999999999999999999999999998899999998764

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.9e-32  Score=245.92  Aligned_cols=274  Identities=30%  Similarity=0.403  Sum_probs=220.9

Q ss_pred             cccchHHHHHHhhccCCCEEEeCCC-chhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           48 SLALSPRIISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        48 ~~~~~~~l~~~i~~~~pDiI~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .......+.+.+++.+||+||++.. ... +...+..+ .++|+++++|+.............      ...+..++.+|
T Consensus        66 ~~~~~~~~~~~~~~~~~dii~~~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d  137 (353)
T cd03811          66 DLLAILRLRRLLRKEKPDVVISHLTTTPN-VLALLAAR-LGTKLIVWEHNSLSLELKRKLRLL------LLIRKLYRRAD  137 (353)
T ss_pred             chhHHHHHHHHHHhcCCCEEEEcCccchh-HHHHHHhh-cCCceEEEEcCcchhhhccchhHH------HHHHhhccccc
Confidence            3445678889999999999999987 222 22222223 389999999997755433221111      36778889999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .++++|+.+++.+.+.++.+..++.++|||++...+.+......   + ....+++++++++|++...||++.++++++.
T Consensus       138 ~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~  213 (353)
T cd03811         138 KIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL---E-LGIPPDGPVILAVGRLSPQKGFDTLIRAFAL  213 (353)
T ss_pred             eEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh---h-cCCCCCceEEEEEecchhhcChHHHHHHHHH
Confidence            99999999999999998765789999999999887765433211   1 1124567899999999999999999999998


Q ss_pred             CC----CceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          207 LP----EARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       207 ~~----~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +.    +++++++|.++..+.+++....    .++.+.|++  +++.++++.||++++||..|++|++++|||++|+|||
T Consensus       214 l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI  291 (353)
T cd03811         214 LRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVV  291 (353)
T ss_pred             hhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEE
Confidence            74    7999999998887777666553    368999997  6789999999999999999999999999999999999


Q ss_pred             EecCCCCCcccccCCCCCeeEeeCCCCHHHH---HHHHhHhhcCHHHHHHHHHHHHHHH-HhCC
Q 016648          279 GVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC---LSKLEPLLYNQELRETMGQAARQEM-EKYD  338 (385)
Q Consensus       279 ~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l---~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s  338 (385)
                      +++.++..+++   .++.+|++++++|.+++   ++++..+.++++.++++++++++.+ ++|+
T Consensus       292 ~~~~~~~~e~i---~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         292 ATDCPGPREIL---EDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS  352 (353)
T ss_pred             EcCCCChHHHh---cCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence            99999999999   88999999999999999   7888888889999999998777665 5565

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.6e-31  Score=242.13  Aligned_cols=244  Identities=19%  Similarity=0.232  Sum_probs=189.2

Q ss_pred             hhccCCCEEEeCCCchh--HHHHHHHHHHhCCCEEEEEecCCCccc--ccccccccchhHHHHHHHHHHhCCeEEEcChh
Q 016648           59 VARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPVYI--PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        59 i~~~~pDiI~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      .++.+||+||+|++...  .+.+.++++..+.|+|++.|+.+....  .........+....+++.+++.+|.++++|+.
T Consensus        96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~  175 (371)
T PLN02275         96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKA  175 (371)
T ss_pred             hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHH
Confidence            35689999999986432  234556677789999999998642111  11112233445667889999999999999999


Q ss_pred             HHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-------
Q 016648          135 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-------  207 (385)
Q Consensus       135 ~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-------  207 (385)
                      +++.+.+.++.+   +.+++|+. .+.+.+.....      ....+...+++++|++.+.||++.+++|+..+       
T Consensus       176 ~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~~------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~  245 (371)
T PLN02275        176 MQHELDQNWGIR---ATVLYDQP-PEFFRPASLEI------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAR  245 (371)
T ss_pred             HHHHHHHhcCCC---eEEECCCC-HHHcCcCCchh------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhc
Confidence            999998765432   88999985 34454432210      01123345788999999999999999998753       


Q ss_pred             --------------CCceEEEEeCCccHHHHHHHHcCC---CeEEec-ccChHHHHHHHHhCcEEEEcCC---CCCCcHH
Q 016648          208 --------------PEARIAFIGDGPYREELEKMFTGM---PAVFTG-MLLGEELSQAYASGDVFVMPSE---SETLGLV  266 (385)
Q Consensus       208 --------------~~~~l~i~G~g~~~~~l~~~~~~~---~i~~~g-~~~~~~~~~~~~~adi~v~ps~---~e~~~~~  266 (385)
                                    ++++++|+|+|+..+++++++.+.   ++.+.+ +++.++++.+|+.||++++|+.   .|++|++
T Consensus       246 ~~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~  325 (371)
T PLN02275        246 LNESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMK  325 (371)
T ss_pred             cccccccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHH
Confidence                          679999999999999898887754   477765 6999999999999999998632   4889999


Q ss_pred             HHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh
Q 016648          267 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  317 (385)
Q Consensus       267 ~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll  317 (385)
                      ++||||||+|||+++.++.+|++   +++.+|++++  |+++++++|.+++
T Consensus       326 llEAmA~G~PVVa~~~gg~~eiv---~~g~~G~lv~--~~~~la~~i~~l~  371 (371)
T PLN02275        326 VVDMFGCGLPVCAVSYSCIGELV---KDGKNGLLFS--SSSELADQLLELL  371 (371)
T ss_pred             HHHHHHCCCCEEEecCCChHHHc---cCCCCeEEEC--CHHHHHHHHHHhC
Confidence            99999999999999999999999   8999999997  7999999998764

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=2.1e-32  Score=228.10  Aligned_cols=285  Identities=24%  Similarity=0.367  Sum_probs=221.8

Q ss_pred             chHHHHHHhhccCCCEEEeCCC-chhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      .+.-++.++.+++..+||.|++ ..+..-+++.++..|.+.|+|-|..+....-.      ........+..+...|.+|
T Consensus        77 ~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~~------si~~n~ll~~sL~~id~~I  150 (426)
T KOG1111|consen   77 DFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADIG------SILTNKLLPLSLANIDRII  150 (426)
T ss_pred             cCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccchh------hhhhcceeeeeecCCCcEE
Confidence            3556677888889999999987 34456678888999999999999865322111      0111224566788899999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC--
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--  207 (385)
                      |+|...++...-.+..+++++.+|||.++.+.|.|....        ....+-..++.++|+-.+||+|.+++++.+.  
T Consensus       151 cVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~--------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~  222 (426)
T KOG1111|consen  151 CVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD--------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCD  222 (426)
T ss_pred             EEeecCCCceEEEeccCHhHeeeccceeeccccccCccc--------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHh
Confidence            999998888766666788999999999999999885442        1122337899999999999999999888654  


Q ss_pred             --CCceEEEEeCCccHHHHHH----HHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          208 --PEARIAFIGDGPYREELEK----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       208 --~~~~l~i~G~g~~~~~l~~----~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                        |+++++|+|+||....+++    ...+.++.++|.++++++.+.|.+-|++++||..|+|+++++||++||+|||++.
T Consensus       223 ~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTr  302 (426)
T KOG1111|consen  223 KHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTR  302 (426)
T ss_pred             cCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEee
Confidence              8999999999995444444    4445579999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYNAAIWFW  358 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~-~s~~~~~~~~~~~iy~~~~~~~  358 (385)
                      .||.+|+++   ++  -......++++++++++++++.-.   ..-....+..++ |+|+.++++-. .+|.++....
T Consensus       303 VGGIpeVLP---~d--~i~~~~~~~~dl~~~v~~ai~~~~---~~p~~~h~~v~~~y~w~dVa~rTe-kvy~r~~~t~  371 (426)
T KOG1111|consen  303 VGGIPEVLP---ED--MITLGEPGPDDLVGAVEKAITKLR---TLPLEFHDRVKKMYSWKDVAERTE-KVYDRAATTS  371 (426)
T ss_pred             cCCccccCC---cc--ceeccCCChHHHHHHHHHHHHHhc---cCchhHHHHHHHhccHHHHHHHHH-HHHHHHhhcc
Confidence            999999993   22  233444578899999888876321   112233445544 99999999996 7999998754

>PHA01633 putative glycosyl transferase group 1

Probab=99.97  E-value=5.7e-29  Score=216.65  Aligned_cols=238  Identities=16%  Similarity=0.196  Sum_probs=178.1

Q ss_pred             CCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCC
Q 016648           87 CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF  166 (385)
Q Consensus        87 ~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~  166 (385)
                      +.|++.++|+....              . .....+.+.+.+|++|+.+++.+.+.+. +.. + ++++|+|.+.|.+..
T Consensus        70 ~~~~~tt~~g~~~~--------------~-~y~~~m~~~~~vIavS~~t~~~L~~~G~-~~~-i-~I~~GVD~~~f~p~~  131 (335)
T PHA01633         70 KKYFYTTCDGIPNI--------------E-IVNKYLLQDVKFIPNSKFSAENLQEVGL-QVD-L-PVFHGINFKIVENAE  131 (335)
T ss_pred             CCceEEeeCCcCch--------------H-HHHHHHhcCCEEEeCCHHHHHHHHHhCC-CCc-e-eeeCCCChhhcCccc
Confidence            56788888886421              1 3333445577999999999999998754 322 3 478999999887654


Q ss_pred             CC-hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC----C----CceEEEEeCCccHHHHHHHHcCCCeEEe-
Q 016648          167 RS-SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGPYREELEKMFTGMPAVFT-  236 (385)
Q Consensus       167 ~~-~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~----~~~l~i~G~g~~~~~l~~~~~~~~i~~~-  236 (385)
                      .. ...+.+.....++.++++++||+.+.||++.+++|++.+    +    +++++++|.+    .++++....+|++. 
T Consensus       132 ~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----~~~~l~l~~~V~f~g  207 (335)
T PHA01633        132 KLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----QFTQLEVPANVHFVA  207 (335)
T ss_pred             hhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH----HHHHcCCCCcEEEEe
Confidence            22 233333333234678899999999999999999999876    3    2467777742    33333334579888 


Q ss_pred             --cccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCccccc---------------CCCCCeeE
Q 016648          237 --GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE---------------DQDGKIGY  299 (385)
Q Consensus       237 --g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~---------------~~~~~~g~  299 (385)
                        |+++.+++.++|+.||++|+||..|+||++++|||+||+|||+++.++++|+...               +.+...|+
T Consensus       208 ~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~  287 (335)
T PHA01633        208 EFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKW  287 (335)
T ss_pred             cCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCcee
Confidence              5667899999999999999999999999999999999999999999998887521               01223577


Q ss_pred             eeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          300 LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       300 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      .++..|+++++++|..+++..+ .+..+.++++.+++|+|+++.++++
T Consensus       288 ~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~  334 (335)
T PHA01633        288 KIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFL  334 (335)
T ss_pred             eecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhh
Confidence            8888899999999999865432 2344677888889999999999885

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.97  E-value=9.1e-30  Score=235.16  Aligned_cols=277  Identities=19%  Similarity=0.209  Sum_probs=202.9

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHh
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  142 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~  142 (385)
                      ..|+|++|++..+.++.++..+..+.|+++.+|..+|.........+    ...+.+ .+..+|.|.+.+....+.+.+.
T Consensus       131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~----~~~ll~-~~l~~D~igF~t~~~~~~Fl~~  205 (460)
T cd03788         131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPW----REELLR-GLLGADLIGFQTERYARNFLSC  205 (460)
T ss_pred             CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCC----hHHHHH-HHhcCCEEEECCHHHHHHHHHH
Confidence            45999999998777776665555678999999998765432111111    112333 3344999999887665554442


Q ss_pred             c----c------------cCCCcEEEeeCCCCCCCCCCCCCChhhHh---hhcCCCCCCcEEEEEeeccccccHHHHHHH
Q 016648          143 R----V------------TAANKIRIWKKGVDSESFHPRFRSSEMRW---RLSNGEPDKPLIVHVGRLGVEKSLDFLKRV  203 (385)
Q Consensus       143 ~----~------------~~~~~i~vi~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a  203 (385)
                      .    +            ....++.++|||+|.+.|.+.........   +.....+++++|+++||+++.||++.+++|
T Consensus       206 ~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A  285 (460)
T cd03788         206 CSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLA  285 (460)
T ss_pred             HHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHH
Confidence            1    0            12246899999999988865433222111   112234577899999999999999999999


Q ss_pred             HHhC----CC----ceEEEEeCC-----ccH----HHHHHHHcC----------CCeE-EecccChHHHHHHHHhCcEEE
Q 016648          204 MDRL----PE----ARIAFIGDG-----PYR----EELEKMFTG----------MPAV-FTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       204 ~~~~----~~----~~l~i~G~g-----~~~----~~l~~~~~~----------~~i~-~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ++.+    |+    ++++++|.+     +..    +++++++.+          ..++ +.|.++.+++..+|+.||+++
T Consensus       286 ~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v  365 (460)
T cd03788         286 FERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVAL  365 (460)
T ss_pred             HHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEE
Confidence            9765    43    568888643     222    233333211          1244 457889999999999999999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCc----EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCH-HHHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ-ELRETMGQAA  330 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~P----vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~a  330 (385)
                      +||..||+|++++|||+||+|    ||+|+.+|..+.      +.+|+++++.|+++++++|.++++++ ++++.+.+++
T Consensus       366 ~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~------~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~  439 (460)
T cd03788         366 VTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE------LSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKL  439 (460)
T ss_pred             eCccccccCcccceeEEEecCCCceEEEeccccchhh------cCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            999999999999999999999    999988877654      35689999999999999999999854 6788888889


Q ss_pred             HHHHHhCCHHHHHHHHHHHH
Q 016648          331 RQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       331 ~~~~~~~s~~~~~~~~~~~i  350 (385)
                      ++.+++|+++.+++++++.+
T Consensus       440 ~~~v~~~~~~~w~~~~l~~l  459 (460)
T cd03788         440 REYVRTHDVQAWANSFLDDL  459 (460)
T ss_pred             HHHHHhCCHHHHHHHHHHhh
Confidence            99999999999999987643

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.97  E-value=4.1e-29  Score=228.73  Aligned_cols=287  Identities=19%  Similarity=0.215  Sum_probs=211.0

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ++.++.+..+.  -|+|++|+++.+.++.++..+....++.+.+|-.+|....-....+     +.-.-..+-.||.|.+
T Consensus       117 fA~~i~~~~~~--~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~-----r~~il~gll~~dligF  189 (456)
T TIGR02400       117 FAEALAPLLQP--GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPW-----RRELLEGLLAYDLVGF  189 (456)
T ss_pred             HHHHHHHhCCC--CCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCc-----HHHHHHHHhcCCEEEE
Confidence            33344444433  3899999998877777765555677899999987765432221111     1122334567999999


Q ss_pred             cChhHHHHHHHhcc---------------cCCCcEEEeeCCCCCCCCCCCCCChhh---HhhhcCCCCCCcEEEEEeecc
Q 016648          131 PSVAIGKDLEAARV---------------TAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKPLIVHVGRLG  192 (385)
Q Consensus       131 ~s~~~~~~~~~~~~---------------~~~~~i~vi~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~G~~~  192 (385)
                      .+....+.+.....               ....++.++|||+|++.|.+.......   ........+++++|+++||++
T Consensus       190 ~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd  269 (456)
T TIGR02400       190 QTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLD  269 (456)
T ss_pred             CCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccc
Confidence            99988888765321               134568899999999988654322211   111111124678999999999


Q ss_pred             ccccHHHHHHHHHhC----CC----ceEEEEe-----CCccHHHHHHHHcCC--------------Ce-EEecccChHHH
Q 016648          193 VEKSLDFLKRVMDRL----PE----ARIAFIG-----DGPYREELEKMFTGM--------------PA-VFTGMLLGEEL  244 (385)
Q Consensus       193 ~~k~~~~l~~a~~~~----~~----~~l~i~G-----~g~~~~~l~~~~~~~--------------~i-~~~g~~~~~~~  244 (385)
                      +.||++.+++|++++    |+    +.++++|     +++....+++.+.+.              .+ .+.|.++.+++
T Consensus       270 ~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el  349 (456)
T TIGR02400       270 YSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREEL  349 (456)
T ss_pred             cccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHH
Confidence            999999999999875    43    4577664     334444333333211              23 34668889999


Q ss_pred             HHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc----EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-C
Q 016648          245 SQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-N  319 (385)
Q Consensus       245 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P----vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~  319 (385)
                      ..+|+.||++++||..||+|++++||||||+|    +|+|+.+|..+.+   .   +|+++++.|+++++++|.++++ +
T Consensus       350 ~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l---~---~gllVnP~d~~~lA~aI~~aL~~~  423 (456)
T TIGR02400       350 MALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL---N---GALLVNPYDIDGMADAIARALTMP  423 (456)
T ss_pred             HHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh---C---CcEEECCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999    9999999988888   3   6899999999999999999998 5


Q ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 016648          320 QELRETMGQAARQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       320 ~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~i  350 (385)
                      ++++++..+++++.+.+||+..+++++++.+
T Consensus       424 ~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l  454 (456)
T TIGR02400       424 LEEREERHRAMMDKLRKNDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence            6788888888999998899999999988644

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.97  E-value=6.2e-29  Score=225.47  Aligned_cols=263  Identities=17%  Similarity=0.167  Sum_probs=192.2

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  140 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  140 (385)
                      +.+..|++.+.|....+.    ....+.++|++++|.++......      ......++.++++||.|++.|+.+.+.+.
T Consensus       100 ~~~~~i~~~~~P~~~~~~----~~~~~~~~Vyd~~D~~~~~~~~~------~~~~~~e~~~~~~ad~vi~~S~~l~~~~~  169 (373)
T cd04950         100 GFGRPILWYYTPYTLPVA----ALLQASLVVYDCVDDLSAFPGGP------PELLEAERRLLKRADLVFTTSPSLYEAKR  169 (373)
T ss_pred             CCCCcEEEEeCccHHHHH----hhcCCCeEEEEcccchhccCCCC------HHHHHHHHHHHHhCCEEEECCHHHHHHHh
Confidence            455667777766443322    23578899999999765543211      11225788999999999999999999887


Q ss_pred             HhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCcc
Q 016648          141 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPY  220 (385)
Q Consensus       141 ~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~  220 (385)
                      +.+    .++.++|||+|.+.|.+..........  ....++++++|+|++...++++.+.++++..++++++++|.++.
T Consensus       170 ~~~----~~i~~i~ngvd~~~f~~~~~~~~~~~~--~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~p~~~~vliG~~~~  243 (373)
T cd04950         170 RLN----PNVVLVPNGVDYEHFAAARDPPPPPAD--LAALPRPVIGYYGAIAEWLDLELLEALAKARPDWSFVLIGPVDV  243 (373)
T ss_pred             hCC----CCEEEcccccCHHHhhcccccCCChhH--HhcCCCCEEEEEeccccccCHHHHHHHHHHCCCCEEEEECCCcC
Confidence            754    589999999999888654322111011  12346789999999999899998888888889999999998733


Q ss_pred             HHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCC-----CCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC
Q 016648          221 REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES-----ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG  295 (385)
Q Consensus       221 ~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~-----e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~  295 (385)
                      ......+....||+++|++++++++.+++.+|++++|+..     +++|++++||||||+|||+|+.+.+.+.      .
T Consensus       244 ~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~------~  317 (373)
T cd04950         244 SIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY------E  317 (373)
T ss_pred             ccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh------c
Confidence            3333333334689999999999999999999999999863     4679999999999999999986654433      3


Q ss_pred             CeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 016648          296 KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRN  348 (385)
Q Consensus       296 ~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  348 (385)
                      ..+++ .++|+++++++|.+++.++......  ++++.++++||++.++++.+
T Consensus       318 ~~~~~-~~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~  367 (373)
T cd04950         318 DEVVL-IADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLE  367 (373)
T ss_pred             CcEEE-eCCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHH
Confidence            33433 4569999999999976543221111  22235678999999999974

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.96  E-value=1.3e-27  Score=216.88  Aligned_cols=290  Identities=16%  Similarity=0.174  Sum_probs=193.4

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHH-HHhCCCEEEEEecCCCccc--ccc--cccc-------------cchhHHHHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIA-KLLCVPIVMSYHTHVPVYI--PRY--TFSW-------------LVKPMWLVIKFLH  122 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~--~~~--~~~~-------------~~~~~~~~~~~~~  122 (385)
                      ..++||+|+|.+. .+.++..++ +..++|.|+|.|.......  ...  ....             .......+|+.+.
T Consensus       146 ~~~~dViH~HeWm-~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa  224 (590)
T cd03793         146 DEPAVVAHFHEWQ-AGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAA  224 (590)
T ss_pred             CCCCeEEEEcchh-HhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHH
Confidence            3589999999983 344444444 4468889999998553331  110  0000             0012233788999


Q ss_pred             HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhh----------------HhhhcCCCCCCcEEE
Q 016648          123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM----------------RWRLSNGEPDKPLIV  186 (385)
Q Consensus       123 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~i~  186 (385)
                      ..||.++++|+.+++++...++.++++  |+|||+|...|.+..+.+..                +.+.. ..+++++++
T Consensus       225 ~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~-~~~d~tli~  301 (590)
T cd03793         225 HCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYD-FDLDKTLYF  301 (590)
T ss_pred             hhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcC-CCCCCeEEE
Confidence            999999999999999999998877666  99999999998765432111                11111 123556666


Q ss_pred             E-Eeeccc-cccHHHHHHHHHhCC--------Cce---EEEEeCC-----------cc-----HH---HHHHH-------
Q 016648          187 H-VGRLGV-EKSLDFLKRVMDRLP--------EAR---IAFIGDG-----------PY-----RE---ELEKM-------  227 (385)
Q Consensus       187 ~-~G~~~~-~k~~~~l~~a~~~~~--------~~~---l~i~G~g-----------~~-----~~---~l~~~-------  227 (385)
                      | +||+.. .||++.+++|+.++.        +..   |+++-.+           ..     .+   .+++.       
T Consensus       302 f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~  381 (590)
T cd03793         302 FTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFE  381 (590)
T ss_pred             EEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhh
Confidence            6 799988 999999999998761        222   2222111           00     00   00000       


Q ss_pred             -----------------------------------------------------Hc------C--C--CeEEec-ccC---
Q 016648          228 -----------------------------------------------------FT------G--M--PAVFTG-MLL---  240 (385)
Q Consensus       228 -----------------------------------------------------~~------~--~--~i~~~g-~~~---  240 (385)
                                                                           ++      .  .  +|+|++ +++   
T Consensus       382 ~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~  461 (590)
T cd03793         382 AALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTN  461 (590)
T ss_pred             HhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCC
Confidence                                                                 00      0  0  144433 222   


Q ss_pred             ---hHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC-CCC-CeeEeeC-------CCCHHH
Q 016648          241 ---GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED-QDG-KIGYLFN-------PGDLDD  308 (385)
Q Consensus       241 ---~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~-~~~-~~g~~~~-------~~~~~~  308 (385)
                         ..+..++|+.||++|+||.+|+||.+++|||+||+|+|+|+.++..+.+.+. .++ ..|+.+.       +.++++
T Consensus       462 ~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~  541 (590)
T cd03793         462 PLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ  541 (590)
T ss_pred             CcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH
Confidence               2347788999999999999999999999999999999999999885444211 233 3566665       456888


Q ss_pred             HHHHHhHhhcCHHHHHHHHHHHH--HHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          309 CLSKLEPLLYNQELRETMGQAAR--QEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       309 l~~~i~~ll~~~~~~~~~~~~a~--~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      ++++|.++++. +.++.+.++++  +..++|+|++.++.|. +.|+.++.
T Consensus       542 La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~-~A~~~Al~  589 (590)
T cd03793         542 LTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYR-KARQLALS  589 (590)
T ss_pred             HHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhh
Confidence            99999998854 45566665555  6668899999999997 68887763

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.96  E-value=1.5e-27  Score=217.02  Aligned_cols=267  Identities=14%  Similarity=0.196  Sum_probs=197.7

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHH-----hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKL-----LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .+++.+++++.+||+||++++.....++..+.+.     .++|++..++|....                ...++.+.+|
T Consensus        89 ~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~----------------~~~w~~~~~d  152 (382)
T PLN02605         89 AREVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTC----------------HPTWFHKGVT  152 (382)
T ss_pred             HHHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCc----------------CcccccCCCC
Confidence            4678899999999999998764332222222222     478988887775311                1123467899


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .++++|+.+++.+.+.+ .+++++.+++++++.+...+.......+.++.. +++.++++++|+....|++..+++++..
T Consensus       153 ~~~~~s~~~~~~l~~~g-~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl-~~~~~~il~~Gg~~g~~~~~~li~~l~~  230 (382)
T PLN02605        153 RCFCPSEEVAKRALKRG-LEPSQIRVYGLPIRPSFARAVRPKDELRRELGM-DEDLPAVLLMGGGEGMGPLEETARALGD  230 (382)
T ss_pred             EEEECCHHHHHHHHHcC-CCHHHEEEECcccCHhhccCCCCHHHHHHHcCC-CCCCcEEEEECCCcccccHHHHHHHHHH
Confidence            99999999999998875 577899999999987655433333344444433 4567899999998888999999888864


Q ss_pred             C--------CCce-EEEEeCCc-cHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          207 L--------PEAR-IAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       207 ~--------~~~~-l~i~G~g~-~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      .        ++.+ ++++|.+. ..+.+++.....++++.|++  +++.++|+.||++|.++    .|++++|||+||+|
T Consensus       231 ~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~P  304 (382)
T PLN02605        231 SLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFV--TNMEEWMGACDCIITKA----GPGTIAEALIRGLP  304 (382)
T ss_pred             hhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEecc--ccHHHHHHhCCEEEECC----CcchHHHHHHcCCC
Confidence            2        4565 56677664 34555554334579999999  68999999999999765    47899999999999


Q ss_pred             EEEecC------CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 016648          277 VVGVRA------GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEMEKYDWRAATRTIRN  348 (385)
Q Consensus       277 vI~s~~------~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  348 (385)
                      +|+++.      ++. +.+   .+++.|...  .|+++++++|.++++| ++.+++|++++++.....+.+.+++.+.+
T Consensus       305 vI~~~~~pgqe~gn~-~~i---~~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~  377 (382)
T PLN02605        305 IILNGYIPGQEEGNV-PYV---VDNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHE  377 (382)
T ss_pred             EEEecCCCccchhhH-HHH---HhCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            999984      333 334   345566654  6999999999999998 99999999999988877888888877653

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.96  E-value=6.6e-27  Score=208.51  Aligned_cols=257  Identities=17%  Similarity=0.145  Sum_probs=188.7

Q ss_pred             hHHHHHHhhccCC-CEEEeCCCchhH--HHHHH--HHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           52 SPRIISEVARFKP-DIIHASSPGIMV--FGALI--IAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        52 ~~~l~~~i~~~~p-DiI~~~~~~~~~--~~~~~--~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      ..++.+++...++ |+||++.|....  +...+  ..++.|+|+|+++||.++.......      ..+..++.+++++|
T Consensus        52 ~~~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~------~~~~~~~~~~~~aD  125 (333)
T PRK09814         52 SKRLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY------YLMKEEIDMLNLAD  125 (333)
T ss_pred             HHHHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc------hhhHHHHHHHHhCC
Confidence            3456677888888 999999985543  11222  2234479999999998865432111      12457788999999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .++++|+.+++.+.+.+. +..++.++++..+.......           ...+....++|+|++....++..      .
T Consensus       126 ~iI~~S~~~~~~l~~~g~-~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~i~yaG~l~k~~~l~~------~  187 (333)
T PRK09814        126 VLIVHSKKMKDRLVEEGL-TTDKIIVQGIFDYLNDIELV-----------KTPSFQKKINFAGNLEKSPFLKN------W  187 (333)
T ss_pred             EEEECCHHHHHHHHHcCC-CcCceEeccccccccccccc-----------ccccCCceEEEecChhhchHHHh------c
Confidence            999999999999988754 55678777765543211110           01234568999999985433211      2


Q ss_pred             CCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC-----------CCCCcHHHHHHHhcCC
Q 016648          207 LPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-----------SETLGLVVLEAMSSGI  275 (385)
Q Consensus       207 ~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-----------~e~~~~~~~Ea~a~G~  275 (385)
                      .++++++++|+|+...     ....+|+|.|+++.+++..+|+. |+.+.+..           .-++|.++.||||||+
T Consensus       188 ~~~~~l~i~G~g~~~~-----~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~  261 (333)
T PRK09814        188 SQGIKLTVFGPNPEDL-----ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL  261 (333)
T ss_pred             CCCCeEEEECCCcccc-----ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC
Confidence            4679999999987544     22358999999999999999998 76665432           2367999999999999


Q ss_pred             cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 016648          276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRT  345 (385)
Q Consensus       276 PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~  345 (385)
                      |||+++.++..+++   +++.+|++++  +.+++++++..+  +++.+++|++++++..+++.-....++
T Consensus       262 PVI~~~~~~~~~~V---~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~  324 (333)
T PRK09814        262 PVIVWSKAAIADFI---VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK  324 (333)
T ss_pred             CEEECCCccHHHHH---HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            99999999999999   8999999998  888999999986  467789999999998766554444333

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.95  E-value=8.8e-27  Score=226.13  Aligned_cols=295  Identities=18%  Similarity=0.148  Sum_probs=215.0

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      ..+..++.+.++..  |+|++|+++.+.++.++..+..+.++.+.+|..+|....-....+..     -.-..+-.||.|
T Consensus       135 ~~FA~~i~~~~~~~--d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~-----~il~gll~aDli  207 (797)
T PLN03063        135 RMFLDVVKENYEEG--DVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRS-----ELLRAVLTADLI  207 (797)
T ss_pred             HHHHHHHHHhcCCC--CEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHH-----HHHHHHhcCCEE
Confidence            33444444444333  89999999888888877777788999999999887654322222211     112234568888


Q ss_pred             EEcChhHHHHHHHhc----c-----------cCCCcEEEeeCCCCCCCCCCCCCChh---hHhhhcCCCCCCcEEEEEee
Q 016648          129 LVPSVAIGKDLEAAR----V-----------TAANKIRIWKKGVDSESFHPRFRSSE---MRWRLSNGEPDKPLIVHVGR  190 (385)
Q Consensus       129 i~~s~~~~~~~~~~~----~-----------~~~~~i~vi~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~G~  190 (385)
                      -+.+....+.+.+..    +           ....++.++|+|+|.+.|.+......   ...+......++.+|+++||
T Consensus       208 gF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgR  287 (797)
T PLN03063        208 GFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDR  287 (797)
T ss_pred             EeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecc
Confidence            888888877776521    0           01246889999999987765432211   11111112346789999999


Q ss_pred             ccccccHHHHHHHHHhC----CCc----eEEEEe-----CCccHHHHHHHHcCC--------------CeE-EecccChH
Q 016648          191 LGVEKSLDFLKRVMDRL----PEA----RIAFIG-----DGPYREELEKMFTGM--------------PAV-FTGMLLGE  242 (385)
Q Consensus       191 ~~~~k~~~~l~~a~~~~----~~~----~l~i~G-----~g~~~~~l~~~~~~~--------------~i~-~~g~~~~~  242 (385)
                      +++.||++.+++|++++    |+.    .++.++     +++..+.+++.+.+.              .|+ +.+.++.+
T Consensus       288 Ld~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~  367 (797)
T PLN03063        288 LDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFN  367 (797)
T ss_pred             cccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHH
Confidence            99999999999999875    554    233333     333333343333211              133 44588999


Q ss_pred             HHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc----EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          243 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       243 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P----vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ++..+|+.||++++||..||+|++++|||+||+|    +|+|..+|..+.+     +..|++++|.|+++++++|.++++
T Consensus       368 el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-----~~~allVnP~D~~~lA~AI~~aL~  442 (797)
T PLN03063        368 YLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-----GAGALLVNPWNITEVSSAIKEALN  442 (797)
T ss_pred             HHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-----cCCeEEECCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999    9999999988877     567999999999999999999999


Q ss_pred             -CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          319 -NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       319 -~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                       +++++++..++.++.+.+++|..+++.+++ -++++..
T Consensus       443 m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~-~l~~~~~  480 (797)
T PLN03063        443 MSDEERETRHRHNFQYVKTHSAQKWADDFMS-ELNDIIV  480 (797)
T ss_pred             CCHHHHHHHHHHHHHhhhhCCHHHHHHHHHH-HHHHHhh
Confidence             788888888889999999999999999984 5555543

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.95  E-value=3.1e-26  Score=211.85  Aligned_cols=282  Identities=16%  Similarity=0.208  Sum_probs=198.2

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+++++.+||++|++....+.. .+..++..++|+++..|.........      .+.+..+.+.+++.+|.|++
T Consensus       112 ~~~~~~~~l~~~~Pd~v~~~~~~~~~~-~l~~~~~~~ip~vl~~~~~~~~s~~~------~~~~~~~~r~~~~~~d~ii~  184 (425)
T PRK05749        112 LPGAVRRFLRFWRPKLVIIMETELWPN-LIAELKRRGIPLVLANARLSERSFKR------YQKFKRFYRLLFKNIDLVLA  184 (425)
T ss_pred             cHHHHHHHHHhhCCCEEEEEecchhHH-HHHHHHHCCCCEEEEeccCChhhHHH------HHHHHHHHHHHHHhCCEEEE
Confidence            346888999999999999986533322 23345778999988655432211111      11234567788999999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCC-C--hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR-S--SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      .|+..++.+.+.+. +.+ +.+++|. +.+...+... .  ...+.+.  . +++++++++|+.  .|+.+.+++|++++
T Consensus       185 ~S~~~~~~l~~~g~-~~~-i~vi~n~-~~d~~~~~~~~~~~~~~r~~~--~-~~~~vil~~~~~--~~~~~~ll~A~~~l  256 (425)
T PRK05749        185 QSEEDAERFLALGA-KNE-VTVTGNL-KFDIEVPPELAARAATLRRQL--A-PNRPVWIAASTH--EGEEELVLDAHRAL  256 (425)
T ss_pred             CCHHHHHHHHHcCC-CCC-cEecccc-cccCCCChhhHHHHHHHHHHh--c-CCCcEEEEeCCC--chHHHHHHHHHHHH
Confidence            99999999988753 555 8888885 2222221111 1  1112222  2 456778887764  57788899998764


Q ss_pred             ----CCceEEEEeCCccH-HHHHHHHcCCC-----------------eEEecccChHHHHHHHHhCcEEEE-cCCCCCCc
Q 016648          208 ----PEARIAFIGDGPYR-EELEKMFTGMP-----------------AVFTGMLLGEELSQAYASGDVFVM-PSESETLG  264 (385)
Q Consensus       208 ----~~~~l~i~G~g~~~-~~l~~~~~~~~-----------------i~~~g~~~~~~~~~~~~~adi~v~-ps~~e~~~  264 (385)
                          ++++++|+|+|+.. +++++.+.+.+                 +.+.+.  .+|+..+|+.||++++ +|..|++|
T Consensus       257 ~~~~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~--~~el~~~y~~aDi~~v~~S~~e~~g  334 (425)
T PRK05749        257 LKQFPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDT--MGELGLLYAIADIAFVGGSLVKRGG  334 (425)
T ss_pred             HHhCCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEec--HHHHHHHHHhCCEEEECCCcCCCCC
Confidence                78999999999875 67777766443                 223332  2699999999999655 67778999


Q ss_pred             HHHHHHHhcCCcEEEecC-CCCCcccccCCC-CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHH
Q 016648          265 LVVLEAMSSGIPVVGVRA-GGIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAA  342 (385)
Q Consensus       265 ~~~~Ea~a~G~PvI~s~~-~~~~e~~~~~~~-~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~  342 (385)
                      .+++|||+||+|||+++. ++..+..   +. ..+|.++.++|+++++++|.++++|++.+++|+++|++.+++.  ...
T Consensus       335 ~~~lEAma~G~PVI~g~~~~~~~e~~---~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~  409 (425)
T PRK05749        335 HNPLEPAAFGVPVISGPHTFNFKEIF---ERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGA  409 (425)
T ss_pred             CCHHHHHHhCCCEEECCCccCHHHHH---HHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccH
Confidence            999999999999999765 4555655   22 2357777788999999999999999999999999999998654  245


Q ss_pred             HHHHHHHHHHHHH
Q 016648          343 TRTIRNEQYNAAI  355 (385)
Q Consensus       343 ~~~~~~~iy~~~~  355 (385)
                      .+++. +++++.+
T Consensus       410 ~~~~~-~~l~~~l  421 (425)
T PRK05749        410 LQRTL-QLLEPYL  421 (425)
T ss_pred             HHHHH-HHHHHhc
Confidence            55555 3555443

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.95  E-value=5.1e-26  Score=205.64  Aligned_cols=256  Identities=20%  Similarity=0.228  Sum_probs=191.4

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..++.+++++.+||+||++++.. .+.+..+++..++|+++..|+.++.               ...+.+++.+|.+++.
T Consensus        78 ~~~~~~~i~~~~pDvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~---------------~~~~~~~~~~~~vi~~  141 (350)
T cd03785          78 VLQARKILKKFKPDVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPG---------------LANRLLARFADRVALS  141 (350)
T ss_pred             HHHHHHHHHhcCCCEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCcc---------------HHHHHHHHhhCEEEEc
Confidence            45678889999999999997633 4445566788899998765543211               1345667789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHH-HHHHHHHhCC--
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD-FLKRVMDRLP--  208 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~-~l~~a~~~~~--  208 (385)
                      |+...+.      .+..++.+++||++.+.+.+...    +.+.. .++++++++++|+....|+.. .++++++.++  
T Consensus       142 s~~~~~~------~~~~~~~~i~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~  210 (350)
T cd03785         142 FPETAKY------FPKDKAVVTGNPVREEILALDRE----RARLG-LRPGKPTLLVFGGSQGARAINEAVPEALAELLRK  210 (350)
T ss_pred             chhhhhc------CCCCcEEEECCCCchHHhhhhhh----HHhcC-CCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhcc
Confidence            9988776      25678999999999876643211    22222 244567777777666666664 4558877773  


Q ss_pred             CceE-EEEeCCccHHHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC-
Q 016648          209 EARI-AFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG-  284 (385)
Q Consensus       209 ~~~l-~i~G~g~~~~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~-  284 (385)
                      +..+ .++|.| +.+++++...+  .++++.|++  +++.++|+.||+++.++.    +++++|||++|+|+|+++.++ 
T Consensus       211 ~~~~~~i~G~g-~~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~  283 (350)
T cd03785         211 RLQVIHQTGKG-DLEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYA  283 (350)
T ss_pred             CeEEEEEcCCc-cHHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCC
Confidence            5554 467877 55667666654  489999998  899999999999998662    689999999999999987654 


Q ss_pred             -------CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHH
Q 016648          285 -------IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  344 (385)
Q Consensus       285 -------~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~  344 (385)
                             ..+.+   .+..+|++++++  |+++++++|..+++|++.++++++++++..+.+.-+++++
T Consensus       284 ~~~~~~~~~~~l---~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~  349 (350)
T cd03785         284 ADDHQTANARAL---VKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD  349 (350)
T ss_pred             CCCcHHHhHHHH---HhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence                   13455   556789999876  8999999999999999999999999998877777776654

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.95  E-value=7.2e-26  Score=204.92  Aligned_cols=263  Identities=23%  Similarity=0.233  Sum_probs=194.8

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....++.+.+++.+||+||+|++.. .+.+.+.++..++|+|++.|+..+.               ...+++++.+|.++
T Consensus        78 ~~~~~~~~~ik~~~pDvv~~~~~~~-~~~~~~~~~~~~~p~v~~~~~~~~~---------------~~~r~~~~~~d~ii  141 (357)
T PRK00726         78 KGVLQARKILKRFKPDVVVGFGGYV-SGPGGLAARLLGIPLVIHEQNAVPG---------------LANKLLARFAKKVA  141 (357)
T ss_pred             HHHHHHHHHHHhcCCCEEEECCCcc-hhHHHHHHHHcCCCEEEEcCCCCcc---------------HHHHHHHHHhchhe
Confidence            3455778889999999999998533 3334556778899999866653221               14566788999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHH-HHHHhCC
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK-RVMDRLP  208 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~-~a~~~~~  208 (385)
                      +.++...   .+   .+..++.++|||++.+.+.+...    ..+.. ..++.++++++|+....++...++ ++++++.
T Consensus       142 ~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~  210 (357)
T PRK00726        142 TAFPGAF---PE---FFKPKAVVTGNPVREEILALAAP----PARLA-GREGKPTLLVVGGSQGARVLNEAVPEALALLP  210 (357)
T ss_pred             ECchhhh---hc---cCCCCEEEECCCCChHhhcccch----hhhcc-CCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh
Confidence            9887442   12   36789999999999876543211    11111 134567888899888778765544 8887774


Q ss_pred             C--ceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC-
Q 016648          209 E--ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-  285 (385)
Q Consensus       209 ~--~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~-  285 (385)
                      +  ..+.++|+|+..+..+......++.+.|++  +++.++|+.||+++.++.    +.+++|||++|+|+|+++.++. 
T Consensus       211 ~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~  284 (357)
T PRK00726        211 EALQVIHQTGKGDLEEVRAAYAAGINAEVVPFI--DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAA  284 (357)
T ss_pred             hCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehH--hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCC
Confidence            3  456678988754433333122238999998  899999999999998652    6899999999999999876431 


Q ss_pred             -------CcccccCCCCCeeEeeCCCC--HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 016648          286 -------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRN  348 (385)
Q Consensus       286 -------~e~~~~~~~~~~g~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  348 (385)
                             .+.+   .+..+|++++++|  +++++++|+++++|++.+++|++++++..++++.+.+++.+.+
T Consensus       285 ~~~~~~~~~~i---~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (357)
T PRK00726        285 DDHQTANARAL---VDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEE  353 (357)
T ss_pred             cCcHHHHHHHH---HHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHH
Confidence                   2445   5677899998877  9999999999999999999999999998888999999888863

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=7.8e-26  Score=206.31  Aligned_cols=271  Identities=16%  Similarity=0.163  Sum_probs=194.8

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .+++.+++++.+||+||++.+.. .+..+..++..++|++..+++....                 ..++.+++|.+++.
T Consensus        93 ~~~l~~~l~~~~pD~Vi~~~~~~-~~~~~~~~~~~~ip~~~~~td~~~~-----------------~~~~~~~ad~i~~~  154 (380)
T PRK13609         93 RKRLKLLLQAEKPDIVINTFPII-AVPELKKQTGISIPTYNVLTDFCLH-----------------KIWVHREVDRYFVA  154 (380)
T ss_pred             HHHHHHHHHHhCcCEEEEcChHH-HHHHHHHhcCCCCCeEEEeCCCCCC-----------------cccccCCCCEEEEC
Confidence            46788999999999999987643 3333333344568887655553211                 12356789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCce
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR  211 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~  211 (385)
                      |+...+.+.+.+ .+.+++.+++++++.... ........+.+....++...++++.|+....|++..+++++.+.++++
T Consensus       155 s~~~~~~l~~~g-i~~~ki~v~G~p~~~~f~-~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~~~~~  232 (380)
T PRK13609        155 TDHVKKVLVDIG-VPPEQVVETGIPIRSSFE-LKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSVPDLQ  232 (380)
T ss_pred             CHHHHHHHHHcC-CChhHEEEECcccChHHc-CcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhCCCcE
Confidence            999999998865 467788888776654322 222222333344332333445667788888899999999998778899


Q ss_pred             EEEEeC-C-ccHHHHHHHHcCC--CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec-CCCCC
Q 016648          212 IAFIGD-G-PYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR-AGGIP  286 (385)
Q Consensus       212 l~i~G~-g-~~~~~l~~~~~~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~-~~~~~  286 (385)
                      ++++|+ + ...+.+++...+.  ++++.|++  +++.++|+.||+++.    ++.|.+++|||+||+|+|+++ .++..
T Consensus       233 ~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~  306 (380)
T PRK13609        233 VVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQE  306 (380)
T ss_pred             EEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcc
Confidence            887753 3 3456676665433  69999999  679999999999884    345889999999999999975 44421


Q ss_pred             ----cccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          287 ----DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       287 ----e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                          +++   .+  +|..+...|+++++++|.++++|++.+++|++++++..+.++++.+++.+++ ++...
T Consensus       307 ~~n~~~~---~~--~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~-~~~~~  372 (380)
T PRK13609        307 KENAMYF---ER--KGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILA-ENHVE  372 (380)
T ss_pred             hHHHHHH---Hh--CCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHH-hhhhh
Confidence                233   22  2333345699999999999999999999999999887777999999999874 55433

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.94  E-value=2.2e-25  Score=203.07  Aligned_cols=272  Identities=14%  Similarity=0.226  Sum_probs=194.0

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .+++.+++++++||+|+++.+.. .+..+..++..++|++...+|....                 ..++.+.+|.+++.
T Consensus        93 ~~~l~~~l~~~kPDvVi~~~p~~-~~~~l~~~~~~~iP~~~v~td~~~~-----------------~~w~~~~~d~~~v~  154 (391)
T PRK13608         93 LNKLINLLIKEKPDLILLTFPTP-VMSVLTEQFNINIPVATVMTDYRLH-----------------KNWITPYSTRYYVA  154 (391)
T ss_pred             HHHHHHHHHHhCcCEEEECCcHH-HHHHHHHhcCCCCCEEEEeCCCCcc-----------------cccccCCCCEEEEC
Confidence            46888999999999999987643 2222222234578986654443110                 11345789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHH-HhCCCc
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM-DRLPEA  210 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~-~~~~~~  210 (385)
                      |+.+++.+.+.+ .+.+++.+++++++.....+ ......+.++...++...++++.|+++..|+++.+++++ +..+++
T Consensus       155 s~~~~~~l~~~g-i~~~ki~v~GiPv~~~f~~~-~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~~~~~  232 (391)
T PRK13608        155 TKETKQDFIDVG-IDPSTVKVTGIPIDNKFETP-IDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAKSANA  232 (391)
T ss_pred             CHHHHHHHHHcC-CCHHHEEEECeecChHhccc-ccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhcCCCc
Confidence            999999998865 46788999888877543322 222233333333233344567789999889999999985 344678


Q ss_pred             eEEEE-eCCc-cHHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC-CC--
Q 016648          211 RIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GG--  284 (385)
Q Consensus       211 ~l~i~-G~g~-~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~-~~--  284 (385)
                      +++++ |.+. ..+.+++... ..++.+.|++  +++.++|+.||++|.    .+.|+++.|||++|+|+|+++. ++  
T Consensus       233 ~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe  306 (391)
T PRK13608        233 QVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQE  306 (391)
T ss_pred             eEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcc
Confidence            88665 5443 2344554432 3479999998  789999999999996    3458899999999999999853 33  


Q ss_pred             --CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          285 --IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       285 --~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                        ...++   .+.+.|+..  +|.++++++|.++++|++.+++|++++++..+.++++.+++.+. ++++.+.
T Consensus       307 ~~N~~~~---~~~G~g~~~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~-~l~~~~~  373 (391)
T PRK13608        307 LENALYF---EEKGFGKIA--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLL-DLIGHSS  373 (391)
T ss_pred             hhHHHHH---HhCCcEEEe--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH-HHhhhhh
Confidence              11233   344556554  49999999999999999999999999999888899999999997 4666554

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.94  E-value=1.8e-25  Score=217.70  Aligned_cols=291  Identities=20%  Similarity=0.263  Sum_probs=206.8

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ++.++.+.++..  |+|++|+++.+.++.++..+..+.++.+.+|-.+|....-....+..     -.-..+..+|.|-+
T Consensus       123 fA~~~~~~~~~~--d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~-----~ll~~ll~~Dligf  195 (726)
T PRK14501        123 FAEAIAAIARPG--DVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWRE-----EILEGLLGADLIGF  195 (726)
T ss_pred             HHHHHHHhcCCC--CEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCChH-----HHHHHHhcCCeEEe
Confidence            344444444433  99999999888887776556667899999999887643222222111     12234566898888


Q ss_pred             cChhHHHHHHHhc----c-----------cCCCcEEEeeCCCCCCCCCCCCCChhh---HhhhcCCCCCCcEEEEEeecc
Q 016648          131 PSVAIGKDLEAAR----V-----------TAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKPLIVHVGRLG  192 (385)
Q Consensus       131 ~s~~~~~~~~~~~----~-----------~~~~~i~vi~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~G~~~  192 (385)
                      .+....+.+.+..    +           ....++.++|+|+|.+.|.+.......   ..++....+++++|+++||++
T Consensus       196 ~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~  275 (726)
T PRK14501        196 HTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLD  275 (726)
T ss_pred             CCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcc
Confidence            8888666654431    0           012358899999999988664332221   111112234677999999999


Q ss_pred             ccccHHHHHHHHHhC----CC----ceEEEEeC----C-ccHHHHHHHHcC----C----------C-eEEecccChHHH
Q 016648          193 VEKSLDFLKRVMDRL----PE----ARIAFIGD----G-PYREELEKMFTG----M----------P-AVFTGMLLGEEL  244 (385)
Q Consensus       193 ~~k~~~~l~~a~~~~----~~----~~l~i~G~----g-~~~~~l~~~~~~----~----------~-i~~~g~~~~~~~  244 (385)
                      +.||+..+++|++++    |+    ++++++|.    + +..+.+++.+.+    .          . +.+.|+++.+++
T Consensus       276 ~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l  355 (726)
T PRK14501        276 YTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEEL  355 (726)
T ss_pred             cccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHH
Confidence            999999999999875    43    67888873    2 222233332221    0          1 357789999999


Q ss_pred             HHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC-----cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          245 SQAYASGDVFVMPSESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       245 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~-----PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      ..+|+.||++++||..||+|++++|||+||+     ||++...|+..++.       .|++++|.|+++++++|.+++++
T Consensus       356 ~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-------~~llv~P~d~~~la~ai~~~l~~  428 (726)
T PRK14501        356 VALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-------EALLVNPNDIEGIAAAIKRALEM  428 (726)
T ss_pred             HHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC-------cCeEECCCCHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999955     66666667666654       37999999999999999999985


Q ss_pred             H-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          320 Q-ELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       320 ~-~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      + ++++...+++++.+++|||+.++++++ ..|+++..
T Consensus       429 ~~~e~~~r~~~~~~~v~~~~~~~w~~~~l-~~l~~~~~  465 (726)
T PRK14501        429 PEEEQRERMQAMQERLRRYDVHKWASDFL-DELREAAE  465 (726)
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHh
Confidence            4 455666677888888999999999998 56766644

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.93  E-value=8.3e-25  Score=176.91  Aligned_cols=153  Identities=38%  Similarity=0.734  Sum_probs=136.1

Q ss_pred             CCCCCcEEEEEeeccccccHHHHHHHHHhC-----CCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHH
Q 016648          178 GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAY  248 (385)
Q Consensus       178 ~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-----~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~  248 (385)
                      ..+++++|+++|++.+.||++.+++++..+     +++.++|+|.+.....+......    .++.+.|.++.+++..+|
T Consensus        11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~   90 (172)
T PF00534_consen   11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELY   90 (172)
T ss_dssp             T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHH
T ss_pred             CCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccccccccc
Confidence            356788999999999999999999999864     68999999977776666665543    369999999999999999


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHH
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  328 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  328 (385)
                      +.||++++||..|++|.+++|||++|+|||+++.++..+++   .++.+|+++++.|+++++++|.+++++++.++.|++
T Consensus        91 ~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~  167 (172)
T PF00534_consen   91 KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEII---NDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGK  167 (172)
T ss_dssp             HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHS---GTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeccccccccccccccccccccccceeeccccCCceee---ccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999   888999999999999999999999999999999999


Q ss_pred             HHHHH
Q 016648          329 AARQE  333 (385)
Q Consensus       329 ~a~~~  333 (385)
                      +++++
T Consensus       168 ~~~~~  172 (172)
T PF00534_consen  168 NARER  172 (172)
T ss_dssp             HHHHH
T ss_pred             HhcCC
Confidence            99864

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.93  E-value=7.9e-24  Score=191.20  Aligned_cols=256  Identities=20%  Similarity=0.224  Sum_probs=181.4

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...++.+++++.+||+||+|.+.. .+.+..+++..++|+++..++..+               ....+++.+.+|.+++
T Consensus        78 ~~~~l~~~i~~~~pDvVi~~~~~~-~~~~~~~~~~~~~p~v~~~~~~~~---------------~~~~~~~~~~~d~ii~  141 (348)
T TIGR01133        78 AVFQARRILKKFKPDAVIGFGGYV-SGPAGLAAKLLGIPLFHHEQNAVP---------------GLTNKLLSRFAKKVLI  141 (348)
T ss_pred             HHHHHHHHHHhcCCCEEEEcCCcc-cHHHHHHHHHcCCCEEEECCCCCc---------------cHHHHHHHHHhCeeEE
Confidence            345778889999999999997643 333444567788999753332111               1145677889999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHH-HHHHHHhC--
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF-LKRVMDRL--  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~-l~~a~~~~--  207 (385)
                      +|+.+.+.+         +..+++||++...+.+...    +.+.. .+++.++++++|+....|++.. ++++++.+  
T Consensus       142 ~~~~~~~~~---------~~~~i~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~  207 (348)
T TIGR01133       142 SFPGAKDHF---------EAVLVGNPVRQEIRSLPVP----RERFG-LREGKPTILVLGGSQGAKILNELVPKALAKLAE  207 (348)
T ss_pred             CchhHhhcC---------CceEEcCCcCHHHhcccch----hhhcC-CCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh
Confidence            999887654         2378999998765543211    11222 2346778999987777788654 55787766  


Q ss_pred             CCceEEEEeCCccHHHHHHHHcCCCe-EEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC-
Q 016648          208 PEARIAFIGDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-  285 (385)
Q Consensus       208 ~~~~l~i~G~g~~~~~l~~~~~~~~i-~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~-  285 (385)
                      ++.++++++++...+.+++...+.++ ....+.. .++.++|+.||++|.++   | |++++|||++|+|+|+++.++. 
T Consensus       208 ~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~  282 (348)
T TIGR01133       208 KGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFID-ENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPYAA  282 (348)
T ss_pred             cCcEEEEECCcchHHHHHHHHhhCCceEEecCcc-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCc
Confidence            34566444433344667776665543 3334443 38999999999999865   2 7899999999999999987542 


Q ss_pred             ------CcccccCCCCCeeEeeCCCC--HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHH
Q 016648          286 ------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  344 (385)
Q Consensus       286 ------~e~~~~~~~~~~g~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~  344 (385)
                            .+++   .++.+|++++++|  ++++++++.++++|++.+++|+++++++.++...+++++
T Consensus       283 ~~~~~~~~~i---~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~  346 (348)
T TIGR01133       283 DDQYYNAKFL---EDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE  346 (348)
T ss_pred             cchhhHHHHH---HHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence                  2466   6788999998776  999999999999999999999999988776666666554

RL J Bacteriol 1993 Mar;175(6):1841-3

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.92  E-value=6.9e-23  Score=185.59  Aligned_cols=292  Identities=22%  Similarity=0.270  Sum_probs=210.5

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHH---HhCCCEEEEEecCCCccccc------ccccc--------cchhHHHHHHHHHHh
Q 016648           62 FKPDIIHASSPGIMVFGALIIAK---LLCVPIVMSYHTHVPVYIPR------YTFSW--------LVKPMWLVIKFLHRA  124 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~---~~~~p~v~~~h~~~~~~~~~------~~~~~--------~~~~~~~~~~~~~~~  124 (385)
                      ..|||||+|++.....++++...   ...+|.|+|+|+..-.....      .....        .......+++.-+..
T Consensus       129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~  208 (487)
T COG0297         129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY  208 (487)
T ss_pred             CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence            36999999999766555554332   45789999999843221111      00000        000112466777889


Q ss_pred             CCeEEEcChhHHHHHHHh-c--------ccCCCcEEEeeCCCCCCCCCCCCCCh------------------hhHhhhcC
Q 016648          125 ADLTLVPSVAIGKDLEAA-R--------VTAANKIRIWKKGVDSESFHPRFRSS------------------EMRWRLSN  177 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~-~--------~~~~~~i~vi~~~v~~~~~~~~~~~~------------------~~~~~~~~  177 (385)
                      ||.|.++|+...+++... +        .....++.-|-||+|.+.++|.....                  .+..+...
T Consensus       209 ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL  288 (487)
T COG0297         209 ADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL  288 (487)
T ss_pred             ccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence            999999999999988721 1        11235778899999999887754431                  01122222


Q ss_pred             C-CCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcCC--CeEEecccChHHHHHHHHh
Q 016648          178 G-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       178 ~-~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~~--~i~~~g~~~~~~~~~~~~~  250 (385)
                      . ..+.+.+.++||+...||++.+++++..+  ...++++.|.|+  ....+..+....  ++.+.-..+..-...+++.
T Consensus       289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag  368 (487)
T COG0297         289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG  368 (487)
T ss_pred             CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence            2 23569999999999999999999999877  458999999883  233444444433  4555555555667789999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC-----CCCCeeEeeCCCCHHHHHHHHhHhhc---CHHH
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED-----QDGKIGYLFNPGDLDDCLSKLEPLLY---NQEL  322 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~-----~~~~~g~~~~~~~~~~l~~~i~~ll~---~~~~  322 (385)
                      ||++++||+.|++|++-++||..|+++|+..+||.++.+.+.     ....+|+++.+.|+++++.+|.+.+.   ++..
T Consensus       369 aD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~  448 (487)
T COG0297         369 ADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL  448 (487)
T ss_pred             CCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH
Confidence            999999999999999999999999999999999999998432     12579999999999999999998775   3333


Q ss_pred             -HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          323 -RETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       323 -~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                       .+.+..++..  ..|+|+..++++. ++|+.+++
T Consensus       449 ~w~~~~~~~m~--~d~sw~~sa~~y~-~lY~~~~~  480 (487)
T COG0297         449 LWRKVQPNAMG--ADFSWDLSAKEYV-ELYKPLLS  480 (487)
T ss_pred             HHHHHHHhhcc--cccCchhHHHHHH-HHHHHHhc
Confidence             5555555554  5799999999997 79999875

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.91  E-value=8.9e-23  Score=185.77  Aligned_cols=278  Identities=17%  Similarity=0.095  Sum_probs=206.8

Q ss_pred             CEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc-
Q 016648           65 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-  143 (385)
Q Consensus        65 DiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-  143 (385)
                      |+|++|+++.+.++.++-.+..+.++-+.+|..+|....-....+..     -.-..+-.||.|-+.+...++.+.+.. 
T Consensus       134 d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~-----~ll~glL~aDliGFqt~~y~~~Fl~~~~  208 (487)
T TIGR02398       134 ATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWRE-----QIIGSLLCCDYIGFHIPRYVENFVDAAR  208 (487)
T ss_pred             CEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCchH-----HHHHHHhcCCeEEeCCHHHHHHHHHHHH
Confidence            89999999888887776656667889999999887643222222111     122245569999999988887765531 


Q ss_pred             ---cc--------------------------------CCCcEEEeeCCCCCCCCCCCCCCh---hhHhhhcCCCCCCcEE
Q 016648          144 ---VT--------------------------------AANKIRIWKKGVDSESFHPRFRSS---EMRWRLSNGEPDKPLI  185 (385)
Q Consensus       144 ---~~--------------------------------~~~~i~vi~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~i  185 (385)
                         +.                                ..-++.++|.|||++.|.......   +..........++.+|
T Consensus       209 r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiI  288 (487)
T TIGR02398       209 GLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLI  288 (487)
T ss_pred             HHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEE
Confidence               10                                011278899999999885543222   1111122123367899


Q ss_pred             EEEeeccccccHHHHHHHHHhC----C----CceEEEEeCCc---------cHHHHHHHHcCC-----------CeEEec
Q 016648          186 VHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGP---------YREELEKMFTGM-----------PAVFTG  237 (385)
Q Consensus       186 ~~~G~~~~~k~~~~l~~a~~~~----~----~~~l~i~G~g~---------~~~~l~~~~~~~-----------~i~~~g  237 (385)
                      +.++|++..||+...++|++++    |    ++.++++|.+.         ...++++++.+.           -+.+.+
T Consensus       289 l~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~  368 (487)
T TIGR02398       289 LSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR  368 (487)
T ss_pred             EEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC
Confidence            9999999999999999999775    5    46888888542         233444443321           157889


Q ss_pred             ccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC----cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHH
Q 016648          238 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  313 (385)
Q Consensus       238 ~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~----PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i  313 (385)
                      .++.+++..+|+.||+++.++..||++++..||++|+.    |+|.|..+|..+.+      ..+++++|.|+++++++|
T Consensus       369 ~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l------~~AllVNP~d~~~~A~ai  442 (487)
T TIGR02398       369 SLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL------KGALLTNPYDPVRMDETI  442 (487)
T ss_pred             CCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc------CCCEEECCCCHHHHHHHH
Confidence            99999999999999999999999999999999999988    99999999988766      247999999999999999


Q ss_pred             hHhhcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          314 EPLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       314 ~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                      .++++.+ +++++..++.++.+.+++...+++.+++++-.+
T Consensus       443 ~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~~  483 (487)
T TIGR02398       443 YVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQ  483 (487)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhhc
Confidence            9999954 466666667777788999999999998665443

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.90  E-value=4.4e-22  Score=180.57  Aligned_cols=275  Identities=19%  Similarity=0.178  Sum_probs=185.9

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHH-HHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF-LHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii  129 (385)
                      ...++.+++++.+||+||+|+.....+++.++++..|+|++..-++....  ...  ..+.   ....+. +.+.+|.++
T Consensus        74 ~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~--~~~--~~~~---~~~~r~~~~~~ad~~~  146 (365)
T TIGR00236        74 MLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG--DRY--SPMP---EEINRQLTGHIADLHF  146 (365)
T ss_pred             HHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC--CCC--CCCc---cHHHHHHHHHHHHhcc
Confidence            35678899999999999999865666767778888999987543332110  000  0000   112233 345689999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCC-ChhhHhhhcCCCCCCcEEEEEe-ec-cccccHHHHHHHHH
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVG-RL-GVEKSLDFLKRVMD  205 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G-~~-~~~k~~~~l~~a~~  205 (385)
                      ++|+..++.+.+.+ .+++++.+++|++ |......... ....+.+.  . .++.++++.+ +. ...|+++.++++++
T Consensus       147 ~~s~~~~~~l~~~G-~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~--~-~~~~~vl~~~hr~~~~~k~~~~ll~a~~  222 (365)
T TIGR00236       147 APTEQAKDNLLREN-VKADSIFVTGNTVIDALLTNVEIAYSSPVLSEF--G-EDKRYILLTLHRRENVGEPLENIFKAIR  222 (365)
T ss_pred             CCCHHHHHHHHHcC-CCcccEEEeCChHHHHHHHHHhhccchhHHHhc--C-CCCCEEEEecCchhhhhhHHHHHHHHHH
Confidence            99999999998875 5778999999996 4322111111 11222222  2 2334555555 33 24588999999987


Q ss_pred             hC----CCceEEEEeCC-c-cHHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          206 RL----PEARIAFIGDG-P-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       206 ~~----~~~~l~i~G~g-~-~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      ++    +++++++.|.+ + ..+.+.+... ..++++.|.++..++..+++.||+++.+|     |..++|||++|+|+|
T Consensus       223 ~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI  297 (365)
T TIGR00236       223 EIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKPVL  297 (365)
T ss_pred             HHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCCEE
Confidence            75    57888887643 2 2222333322 24799999999999999999999999877     556899999999999


Q ss_pred             Ee-cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 016648          279 GV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  346 (385)
Q Consensus       279 ~s-~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  346 (385)
                      ++ +.++.++.+   ..+ .+.++ +.|++++++++.++++|++.+++++.+...+.+..+++++++.+
T Consensus       298 ~~~~~~~~~e~~---~~g-~~~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l  361 (365)
T TIGR00236       298 VLRDTTERPETV---EAG-TNKLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEEL  361 (365)
T ss_pred             ECCCCCCChHHH---hcC-ceEEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHH
Confidence            96 667777887   555 44455 46999999999999999988888776653332334455555544

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.89  E-value=1.1e-21  Score=178.22  Aligned_cols=259  Identities=17%  Similarity=0.151  Sum_probs=178.9

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      .....++.+.+++.+||+||+|+.....+++..+++..|+|++...|+........        ........+.+.+|.+
T Consensus        74 ~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~~--------~~~~~r~~~~~~ad~~  145 (363)
T cd03786          74 AGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGM--------PDEENRHAIDKLSDLH  145 (363)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCCC--------CchHHHHHHHHHhhhc
Confidence            33467788889999999999997655556667778888999886555432210000        0011223456789999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCCChh-hHhhhcCCCCCCcEEEEEeeccc---cccHHHHHHH
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSE-MRWRLSNGEPDKPLIVHVGRLGV---EKSLDFLKRV  203 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~G~~~~---~k~~~~l~~a  203 (385)
                      +++|+..++.+.+.+ .+++++.+++|++ |...+........ .+.... .++++.++++.|+...   .|+++.++++
T Consensus       146 ~~~s~~~~~~l~~~G-~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~vlv~~~r~~~~~~~k~~~~l~~a  223 (363)
T cd03786         146 FAPTEEARRNLLQEG-EPPERIFVVGNTMIDALLRLLELAKKELILELLG-LLPKKYILVTLHRVENVDDGEQLEEILEA  223 (363)
T ss_pred             cCCCHHHHHHHHHcC-CCcccEEEECchHHHHHHHHHHhhccchhhhhcc-cCCCCEEEEEeCCccccCChHHHHHHHHH
Confidence            999999999998875 4788999999985 4322211111111 111222 2334556778888764   7999999999


Q ss_pred             HHhCC--CceEEEEeCCccHHHHHHHHc-----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          204 MDRLP--EARIAFIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       204 ~~~~~--~~~l~i~G~g~~~~~l~~~~~-----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      ++.+.  ++.+++.|.+...+.+++...     ..++.+.|+...+++..+|+.||++|.+|.     ..+.||+++|+|
T Consensus       224 l~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-----gi~~Ea~~~g~P  298 (363)
T cd03786         224 LAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-----GIQEEASFLGVP  298 (363)
T ss_pred             HHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-----cHHhhhhhcCCC
Confidence            98874  366666666665666666543     347999998888999999999999999984     357899999999


Q ss_pred             EEEecC-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHH
Q 016648          277 VVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       277 vI~s~~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      +|+++. +...+.+   +.| .+..+. .|++++++++.++++++..+..|.
T Consensus       299 vI~~~~~~~~~~~~---~~g-~~~~~~-~~~~~i~~~i~~ll~~~~~~~~~~  345 (363)
T cd03786         299 VLNLRDRTERPETV---ESG-TNVLVG-TDPEAILAAIEKLLSDEFAYSLMS  345 (363)
T ss_pred             EEeeCCCCccchhh---hee-eEEecC-CCHHHHHHHHHHHhcCchhhhcCC
Confidence            999864 3344554   333 223322 379999999999999887766553

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.87  E-value=6.4e-21  Score=184.43  Aligned_cols=292  Identities=16%  Similarity=0.155  Sum_probs=209.7

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ++.++.+..+..  |+|++|+++.+.++.++..+..+.++-+.+|..+|....-....+..     -.-..+-.||.|-+
T Consensus       221 FA~~i~~~~~~g--D~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~-----elL~glL~aDlIGF  293 (934)
T PLN03064        221 FADVVNEHYEEG--DVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRS-----ELLRSVLAADLVGF  293 (934)
T ss_pred             HHHHHHHhcCCC--CEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHH-----HHHHHHhcCCeEEe
Confidence            334444444332  89999999888888777666678899999999887643222222211     12224566999999


Q ss_pred             cChhHHHHHHHhc----cc-----------CCCcEEEeeCCCCCCCCCCCCCCh---hhHhhhcCCCCCCcEEEEEeecc
Q 016648          131 PSVAIGKDLEAAR----VT-----------AANKIRIWKKGVDSESFHPRFRSS---EMRWRLSNGEPDKPLIVHVGRLG  192 (385)
Q Consensus       131 ~s~~~~~~~~~~~----~~-----------~~~~i~vi~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~G~~~  192 (385)
                      .+....+.+.+..    +.           ..-++.++|.|||.+.|.......   .....+.....++.+|+.+++++
T Consensus       294 qT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD  373 (934)
T PLN03064        294 HTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLD  373 (934)
T ss_pred             CCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccc
Confidence            9988888776521    10           012366789999998876433222   11112222234677999999999


Q ss_pred             ccccHHHHHHHHHhC----CCc--eEEEE-------eCCccHHHHH----HHHcCCC----------eE-EecccChHHH
Q 016648          193 VEKSLDFLKRVMDRL----PEA--RIAFI-------GDGPYREELE----KMFTGMP----------AV-FTGMLLGEEL  244 (385)
Q Consensus       193 ~~k~~~~l~~a~~~~----~~~--~l~i~-------G~g~~~~~l~----~~~~~~~----------i~-~~g~~~~~~~  244 (385)
                      ..||+...++|++++    |+.  +++++       ++++..+.++    +++.+.|          |+ +...++.+++
T Consensus       374 ~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL  453 (934)
T PLN03064        374 MIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHAL  453 (934)
T ss_pred             cccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHH
Confidence            999999999998864    553  25544       3444434433    3222222          43 3445899999


Q ss_pred             HHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC----cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-C
Q 016648          245 SQAYASGDVFVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-N  319 (385)
Q Consensus       245 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~----PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~  319 (385)
                      ..+|+.||+++++|..||++++..|||+|+.    ++|.|...|..+.+     +..+++++|.|.++++++|.+++. +
T Consensus       454 ~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L-----~~~AllVNP~D~~~vA~AI~~AL~M~  528 (934)
T PLN03064        454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVAASIAQALNMP  528 (934)
T ss_pred             HHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh-----CCceEEECCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999954    44558988888877     456899999999999999999998 8


Q ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          320 QELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       320 ~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      ++++++..++.++.+.++++..+++.+++++.+..
T Consensus       529 ~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        529 EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence            88899999999999999999999999987665543

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.87  E-value=3.6e-20  Score=156.75  Aligned_cols=182  Identities=37%  Similarity=0.559  Sum_probs=138.0

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+.+++.+||+||++++...........+..++|++++.|+.++........        .........++..  
T Consensus        39 ~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~--------~~~~~~~~~~~~~--  108 (229)
T cd01635          39 LLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGVNRSLLEGVPL--------SLLALSIGLADKV--  108 (229)
T ss_pred             chHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEcCccHhhcccCcH--------HHHHHHHhhcceE--
Confidence            455677777789999999999755554443556778999999999987654332211        0111111222222  


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                                                                              |+|++.+.||++.+++++..+   
T Consensus       109 --------------------------------------------------------~~g~~~~~k~~~~~~~a~~~l~~~  132 (229)
T cd01635         109 --------------------------------------------------------FVGRLAPEKGLDDLIEAFALLKER  132 (229)
T ss_pred             --------------------------------------------------------EEEeecccCCHHHHHHHHHHHHHh
Confidence                                                                    999999999999999999877   


Q ss_pred             -CCceEEEEeCCccHHHHHH----HHcCCCeEEecccCh-HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          208 -PEARIAFIGDGPYREELEK----MFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       208 -~~~~l~i~G~g~~~~~l~~----~~~~~~i~~~g~~~~-~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                       ++++++++|.+........    .....++.+.|+++. +++..+++.||++++|+..|++|++++|||++|+|+|+|+
T Consensus       133 ~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~  212 (229)
T cd01635         133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATD  212 (229)
T ss_pred             CCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcC
Confidence             3899999998877665543    222347999999854 5666666669999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEee
Q 016648          282 AGGIPDIIPEDQDGKIGYLF  301 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~  301 (385)
                      .++..|.+   .++.+|+++
T Consensus       213 ~~~~~e~i---~~~~~g~~~  229 (229)
T cd01635         213 VGGPPEIV---EDGLTGLLV  229 (229)
T ss_pred             CCCcceEE---ECCCceEEC
Confidence            99999988   778888764

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.87  E-value=4.1e-20  Score=168.87  Aligned_cols=267  Identities=15%  Similarity=0.137  Sum_probs=173.4

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....++.+++++.+||+||+++...........++..++|+++..+...  +      .+...    ..+.+.+.+|.++
T Consensus        72 ~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~--~------~~~~~----~~~~~~~~~d~i~  139 (380)
T PRK00025         72 KIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSV--W------AWRQG----RAFKIAKATDHVL  139 (380)
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCch--h------hcCch----HHHHHHHHHhhhe
Confidence            3456788899999999999987422222222345667999987644310  0      01111    2233578899999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEE-EEEeec-ccc-ccHHHHHHHHHh
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI-VHVGRL-GVE-KSLDFLKRVMDR  206 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~G~~-~~~-k~~~~l~~a~~~  206 (385)
                      +.|+...+.+.+.+.    ++.+++|++...... .......+.++.. +++.+++ ++.|+- ... +.++.++++++.
T Consensus       140 ~~~~~~~~~~~~~g~----~~~~~G~p~~~~~~~-~~~~~~~~~~l~~-~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~  213 (380)
T PRK00025        140 ALFPFEAAFYDKLGV----PVTFVGHPLADAIPL-LPDRAAARARLGL-DPDARVLALLPGSRGQEIKRLLPPFLKAAQL  213 (380)
T ss_pred             eCCccCHHHHHhcCC----CeEEECcCHHHhccc-ccChHHHHHHcCC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence            999999988877542    366666665433211 1112233333332 3345554 455533 232 446788887765


Q ss_pred             C----CCceEEEEeC-CccHHHHHHHHcCC---CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          207 L----PEARIAFIGD-GPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       207 ~----~~~~l~i~G~-g~~~~~l~~~~~~~---~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +    ++++++++|. +...+.+++...+.   ++.+.    .+++..+|+.||++|.+|     |.+++|||++|+|+|
T Consensus       214 l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI  284 (380)
T PRK00025        214 LQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL----DGQKREAMAAADAALAAS-----GTVTLELALLKVPMV  284 (380)
T ss_pred             HHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE----cccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEE
Confidence            4    6788888875 55566677666543   34332    258999999999999987     788889999999999


Q ss_pred             Ee-----------------cCCCCCcccccCCCC--CeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCH
Q 016648          279 GV-----------------RAGGIPDIIPEDQDG--KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW  339 (385)
Q Consensus       279 ~s-----------------~~~~~~e~~~~~~~~--~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~  339 (385)
                      ++                 +.++.++++   .++  ..+++.+..|++++++++.++++|++.+++|++++.+..+.. -
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~  360 (380)
T PRK00025        285 VGYKVSPLTFWIAKRLVKVPYVSLPNLL---AGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-R  360 (380)
T ss_pred             EEEccCHHHHHHHHHHHcCCeeehHHHh---cCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-C
Confidence            87                 334445665   333  345666777999999999999999999999999886665443 2


Q ss_pred             HHHHHHHH
Q 016648          340 RAATRTIR  347 (385)
Q Consensus       340 ~~~~~~~~  347 (385)
                      ...++++.
T Consensus       361 ~~a~~~~~  368 (380)
T PRK00025        361 CGADERAA  368 (380)
T ss_pred             CCHHHHHH
Confidence            22344444

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.85  E-value=1.1e-19  Score=162.27  Aligned_cols=283  Identities=19%  Similarity=0.215  Sum_probs=199.4

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhC----CCEEEEEecCCCccccc--ccccccchhHHHHHHHHHHhCCeEEEcChhH
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLC----VPIVMSYHTHVPVYIPR--YTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  135 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~----~p~v~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~  135 (385)
                      ++.|.|++...   .....+.....+    ..+.++.|.........  ....+....+.+++......+|.+++.|...
T Consensus       144 ~~~d~~i~d~~---~~~~~l~~~~~~p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~  220 (495)
T KOG0853|consen  144 EKVDPIIEDFV---SACVPLLKQLSGPDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFT  220 (495)
T ss_pred             hhhceeecchH---HHHHHHHHHhcCCcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccceEecchhhh
Confidence            56677777653   222222333332    44556666643333222  1223333445556777788999999999999


Q ss_pred             HHHHHHhcc-cCCCcEEEeeCCCCCCCCCCCCCChhhHhh----hcCCC-CCCcEEEEEeeccccccHHHHHHHHHhC--
Q 016648          136 GKDLEAARV-TAANKIRIWKKGVDSESFHPRFRSSEMRWR----LSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       136 ~~~~~~~~~-~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~----~~~~~-~~~~~i~~~G~~~~~k~~~~l~~a~~~~--  207 (385)
                      +..+..... ....++.+.+.++|.+.+.+.........+    ..... .....+.-+.++.+.||++.+++++..+  
T Consensus       221 ~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~  300 (495)
T KOG0853|consen  221 KRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHD  300 (495)
T ss_pred             hhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhc
Confidence            999887765 333447888888887766542111111101    11111 2255677788899999999999998765  


Q ss_pred             -------CCceEEEEeCC-------c---cHHHHHHHHcCC-----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcH
Q 016648          208 -------PEARIAFIGDG-------P---YREELEKMFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  265 (385)
Q Consensus       208 -------~~~~l~i~G~g-------~---~~~~l~~~~~~~-----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~  265 (385)
                             ++.++.+.|+.       +   +.+++.+++++.     .+.++...++.+-..+++.+.+++.....|.||.
T Consensus       301 ~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGi  380 (495)
T KOG0853|consen  301 SIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGI  380 (495)
T ss_pred             ccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccc
Confidence                   24567777722       1   234555555544     3667788877777888888888776555599999


Q ss_pred             HHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHH---HHHHHHhHhhcCHHHHHHHHHHHHHHHHh-CCHHH
Q 016648          266 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD---DCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA  341 (385)
Q Consensus       266 ~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~---~l~~~i~~ll~~~~~~~~~~~~a~~~~~~-~s~~~  341 (385)
                      +++|||+||+|||+++.||..|++   .++.+|+++++ +.+   .+++++.++..|++.+.+|++++++.+++ |+|+.
T Consensus       381 v~IEAMa~glPvvAt~~GGP~EiV---~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~  456 (495)
T KOG0853|consen  381 VPIEAMACGLPVVATNNGGPAEIV---VHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQH  456 (495)
T ss_pred             eeHHHHhcCCCEEEecCCCceEEE---EcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHH
Confidence            999999999999999999999999   99999999999 656   69999999999999999999999999965 99988


Q ss_pred             HHHHHHHHHHH
Q 016648          342 ATRTIRNEQYN  352 (385)
Q Consensus       342 ~~~~~~~~iy~  352 (385)
                      +.+++.+ +..
T Consensus       457 ~~~ri~~-~~~  466 (495)
T KOG0853|consen  457 YSERIAS-VLG  466 (495)
T ss_pred             HHHHHHH-HhH
Confidence            8888863 444

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=1.7e-18  Score=156.36  Aligned_cols=285  Identities=38%  Similarity=0.577  Sum_probs=202.9

Q ss_pred             HHhhccC-CCEEEeCCCchhH--HHHHHHHHHhCCCEEEEEecCCCcccccccccccch----hHHHHHHHHHHhCCeEE
Q 016648           57 SEVARFK-PDIIHASSPGIMV--FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVK----PMWLVIKFLHRAADLTL  129 (385)
Q Consensus        57 ~~i~~~~-pDiI~~~~~~~~~--~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ad~ii  129 (385)
                      ....... +|+++.+......  ..........+.+.+...|.................    ............++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (381)
T COG0438          76 LLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVI  155 (381)
T ss_pred             HHhccccccceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEE
Confidence            3333344 5999988653332  123334455677888888886542211111110000    01111111112478889


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCC-CcEEEEEeeccccccHHHHHHHHHhCC
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLP  208 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~k~~~~l~~a~~~~~  208 (385)
                      +.+......+.....  ..++.+++++++.+.+.....        ...... ...++++|++.+.||++.++++++.++
T Consensus       156 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~  225 (381)
T COG0438         156 AVSPALKELLEALGV--PNKIVVIPNGIDTEKFAPARI--------GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLK  225 (381)
T ss_pred             ECCHHHHHHHHHhCC--CCCceEecCCcCHHHcCcccc--------CCCcccCceEEEEeeccChhcCHHHHHHHHHHhh
Confidence            998888676666653  337889999999887664200        011112 378999999999999999999999884


Q ss_pred             C----ceEEEEeCCccH-HHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          209 E----ARIAFIGDGPYR-EELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       209 ~----~~l~i~G~g~~~-~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      +    ..+.++|.+... +.+.....    ..++.+.|.++.+++..+++.||++++|+..|++|.+++|||++|+|||+
T Consensus       226 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~  305 (381)
T COG0438         226 KRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIA  305 (381)
T ss_pred             hhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEE
Confidence            3    789999988752 33333333    34689999999888999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ++.++..+.+   .++.+|+++...+.+++++++..++++++.++.+.+.+++.+ +.|+|+..++.+. .++....
T Consensus       306 ~~~~~~~e~~---~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  378 (381)
T COG0438         306 SDVGGIPEVV---EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLL-ELYEELL  378 (381)
T ss_pred             CCCCChHHHh---cCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHH
Confidence            9999999999   666668777776899999999999999877788887666665 5799999999886 5776654

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.85  E-value=6.6e-19  Score=146.90  Aligned_cols=283  Identities=15%  Similarity=0.229  Sum_probs=204.0

Q ss_pred             HHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCc--ccc-------cccccccchhHHH----HHHHHH
Q 016648           56 ISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV--YIP-------RYTFSWLVKPMWL----VIKFLH  122 (385)
Q Consensus        56 ~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~-------~~~~~~~~~~~~~----~~~~~~  122 (385)
                      ...+-+..|||.+-....++.++.  .++..++|++..+|-..-.  ...       .....|..-.+++    +++.+-
T Consensus       143 ~Eai~r~~Pdi~IDtMGY~fs~p~--~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G  220 (465)
T KOG1387|consen  143 FEAIIRFPPDIFIDTMGYPFSYPI--FRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAG  220 (465)
T ss_pred             HHHHHhCCchheEecCCCcchhHH--HHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            345567899998877654555543  3457899999988863211  110       0011122222222    334444


Q ss_pred             HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHH
Q 016648          123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  202 (385)
Q Consensus       123 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~  202 (385)
                      .+||.+.+.|.++.+.+.+....  .++.+++.+.+.+.+...         .....++.+.++++|.+.++|+.. +++
T Consensus       221 ~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~---------~~te~~r~~~ll~l~Q~RPEKnH~-~Lq  288 (465)
T KOG1387|consen  221 SKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSK---------FGTEGERENQLLSLAQFRPEKNHK-ILQ  288 (465)
T ss_pred             ccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHH---------hcccCCcceEEEEEeecCcccccH-HHH
Confidence            67999999999999999998863  577777777766533221         111234567899999999999988 444


Q ss_pred             HHHh----C------CCceEEEEeCC---ccHHHHHH---HHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCC
Q 016648          203 VMDR----L------PEARIAFIGDG---PYREELEK---MFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESET  262 (385)
Q Consensus       203 a~~~----~------~~~~l~i~G~g---~~~~~l~~---~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~  262 (385)
                      ...-    .      +++++.++|+.   ++.+.++.   ++.+    .++.|.-.+|.+++..++..|.+.|.....|.
T Consensus       289 l~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEH  368 (465)
T KOG1387|consen  289 LFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEH  368 (465)
T ss_pred             HHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhh
Confidence            3321    1      46899999943   23333333   3332    26999999999999999999999999999999


Q ss_pred             CcHHHHHHHhcCCcEEEecCCC-CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCCHH
Q 016648          263 LGLVVLEAMSSGIPVVGVRAGG-IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWR  340 (385)
Q Consensus       263 ~~~~~~Ea~a~G~PvI~s~~~~-~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~  340 (385)
                      ||..+.||||+|+-+|+.+.|| .-+++.+.....+|++..  +.++.++++.+++. |++++..++.+||+.+.+|+-.
T Consensus       369 FGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~  446 (465)
T KOG1387|consen  369 FGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGEL  446 (465)
T ss_pred             cchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHH
Confidence            9999999999998777776654 457776655667899875  88999999999987 7788999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 016648          341 AATRTIRNEQYNAAI  355 (385)
Q Consensus       341 ~~~~~~~~~iy~~~~  355 (385)
                      ...+.+. ..+..++
T Consensus       447 ~F~kd~~-~~i~kll  460 (465)
T KOG1387|consen  447 KFDKDWE-NPICKLL  460 (465)
T ss_pred             HHHHhHh-HHHHHhh
Confidence            9988886 4555555

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=3e-18  Score=143.06  Aligned_cols=282  Identities=18%  Similarity=0.242  Sum_probs=208.6

Q ss_pred             HHhhccCCCEEEeCCCchh--HHHHHHHHHHhCCCEEEEEecCCCc---ccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           57 SEVARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPV---YIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        57 ~~i~~~~pDiI~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      .++....+|+|.+++|...  ...+.++....|.+++++.|+....   .........+.+..++.++.+-+.||.-+|+
T Consensus        97 aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcV  176 (444)
T KOG2941|consen   97 ALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCV  176 (444)
T ss_pred             HHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchhh
Confidence            3444678999999998443  3445566788999999999996543   1122333556677788999999999999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCC-----CC----CCCCCC-----------Chh-----hHhhh-----cCCCCC
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDS-----ES----FHPRFR-----------SSE-----MRWRL-----SNGEPD  181 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~-----~~----~~~~~~-----------~~~-----~~~~~-----~~~~~~  181 (385)
                      ++.|++.+.+..++.  +..+++.-...     +.    |.+...           ...     ...+.     ....+.
T Consensus       177 T~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~  254 (444)
T KOG2941|consen  177 TKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPER  254 (444)
T ss_pred             HHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCC
Confidence            999999999988743  44555432221     00    111000           000     00010     111234


Q ss_pred             CcEEEEEeeccccccHHHHHHHHHhC-----------CCceEEEEeCCccHHHHHHHHcCCC---e-EEecccChHHHHH
Q 016648          182 KPLIVHVGRLGVEKSLDFLKRVMDRL-----------PEARIAFIGDGPYREELEKMFTGMP---A-VFTGMLLGEELSQ  246 (385)
Q Consensus       182 ~~~i~~~G~~~~~k~~~~l~~a~~~~-----------~~~~l~i~G~g~~~~~l~~~~~~~~---i-~~~g~~~~~~~~~  246 (385)
                      ..+++...++.+..++..+++|+..+           |..-++|.|.|+..+...+.+.+.+   | ....++..||.+.
T Consensus       255 pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~  334 (444)
T KOG2941|consen  255 PALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPK  334 (444)
T ss_pred             CeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchh
Confidence            45677777889999999999999733           6778899999999999988888764   3 3477888899999


Q ss_pred             HHHhCcEEEEcCC---CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc----C
Q 016648          247 AYASGDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY----N  319 (385)
Q Consensus       247 ~~~~adi~v~ps~---~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~----~  319 (385)
                      +++.||+.|+...   .--.|+++++...||+||++-+.....|++   ++++||++++  |.+++++.+..+++    |
T Consensus       335 ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELV---kh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~  409 (444)
T KOG2941|consen  335 LLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELV---KHGENGLVFE--DSEELAEQLQMLFKNFPDN  409 (444)
T ss_pred             HhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHH---hcCCCceEec--cHHHHHHHHHHHHhcCCCC
Confidence            9999999876422   335799999999999999999999999999   9999999998  99999999999998    7


Q ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 016648          320 QELRETMGQAARQEMEKYDWRAATRTI  346 (385)
Q Consensus       320 ~~~~~~~~~~a~~~~~~~s~~~~~~~~  346 (385)
                      .++.....+++++. ++..|+..-++.
T Consensus       410 a~~l~~lkkn~~e~-~e~RW~~~W~~~  435 (444)
T KOG2941|consen  410 ADELNQLKKNLREE-QELRWDESWERT  435 (444)
T ss_pred             HHHHHHHHHhhHHH-HhhhHHHHHHHh
Confidence            88888888888877 446665544443

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.79  E-value=4.7e-17  Score=153.02  Aligned_cols=286  Identities=17%  Similarity=0.167  Sum_probs=201.5

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHH-------------hCCCEEEEEecCCCcccccccccccch----------------
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKL-------------LCVPIVMSYHTHVPVYIPRYTFSWLVK----------------  112 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~-------------~~~p~v~~~h~~~~~~~~~~~~~~~~~----------------  112 (385)
                      .+||+||+|++++...+..+....             .+..+++|+|+..+.....+......+                
T Consensus       160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~  239 (601)
T TIGR02094       160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL  239 (601)
T ss_pred             CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence            599999999986655444432111             146789999997665421111111100                


Q ss_pred             -----------hHHHHHHHHHHhCCeEEEcChhHHHHHHHhcc-------cCCCcEEEeeCCCCCCCCCCCCCC------
Q 016648          113 -----------PMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-------TAANKIRIWKKGVDSESFHPRFRS------  168 (385)
Q Consensus       113 -----------~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~-------~~~~~i~vi~~~v~~~~~~~~~~~------  168 (385)
                                 ..-.+.+..+..||.|.++|+...+..+....       ....++.-|-||||...+.+....      
T Consensus       240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y  319 (601)
T TIGR02094       240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERY  319 (601)
T ss_pred             HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHh
Confidence                       00135677788999999999988885544332       113457888999999877652210      


Q ss_pred             ---h-----------------------hh----HhhhcC--------------------------CCCCCcEEEEEeecc
Q 016648          169 ---S-----------------------EM----RWRLSN--------------------------GEPDKPLIVHVGRLG  192 (385)
Q Consensus       169 ---~-----------------------~~----~~~~~~--------------------------~~~~~~~i~~~G~~~  192 (385)
                         .                       +.    +.++..                          ..++.+++++++|+.
T Consensus       320 ~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~  399 (601)
T TIGR02094       320 LGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFA  399 (601)
T ss_pred             CCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcch
Confidence               0                       00    001100                          245678999999999


Q ss_pred             ccccHHHHHHHHHhC--------CCceEEEEeCCc--------cHHHHHHHHcC--C--CeEEecccChHHHHHHHHhCc
Q 016648          193 VEKSLDFLKRVMDRL--------PEARIAFIGDGP--------YREELEKMFTG--M--PAVFTGMLLGEELSQAYASGD  252 (385)
Q Consensus       193 ~~k~~~~l~~a~~~~--------~~~~l~i~G~g~--------~~~~l~~~~~~--~--~i~~~g~~~~~~~~~~~~~ad  252 (385)
                      ..||.++++.++.++        .++++++.|.+.        ..+.+..+..+  .  +|.|+...+..-...+++.||
T Consensus       400 ~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~D  479 (601)
T TIGR02094       400 TYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVD  479 (601)
T ss_pred             hhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhhe
Confidence            999999988887665        368999999765        34445555544  2  677777776667778899999


Q ss_pred             EEEE-cCC-CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCC------------CCHHHHHHHHhHhh-
Q 016648          253 VFVM-PSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP------------GDLDDCLSKLEPLL-  317 (385)
Q Consensus       253 i~v~-ps~-~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~------------~~~~~l~~~i~~ll-  317 (385)
                      +.++ ||+ .|++|++=+-||..|.+.+++-.|...|..    ++.+|+.+..            .|+++|.++|++.+ 
T Consensus       480 v~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~----~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~  555 (601)
T TIGR02094       480 VWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY----DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVI  555 (601)
T ss_pred             eEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC----CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHH
Confidence            9999 999 999999999999999999999888777765    4679999983            79999999997755 


Q ss_pred             ----cC-----HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 016648          318 ----YN-----QELRETMGQAARQEM-EKYDWRAATRTIRNEQY  351 (385)
Q Consensus       318 ----~~-----~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy  351 (385)
                          ++     |..+.++.+++.+.. ..|||++++++|.+..|
T Consensus       556 ~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy  599 (601)
T TIGR02094       556 PLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY  599 (601)
T ss_pred             HHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence                23     445677777777664 57999999999986444

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.78  E-value=7.1e-19  Score=136.07  Aligned_cols=127  Identities=32%  Similarity=0.551  Sum_probs=93.5

Q ss_pred             cEEEEEeeccccccHHHHHH-HHHhC----CCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEc
Q 016648          183 PLIVHVGRLGVEKSLDFLKR-VMDRL----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       183 ~~i~~~G~~~~~k~~~~l~~-a~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                      ++++++|++...|+++.+++ +++++    |++++.|+|.++.  +++++ ...+|+++|++  +++.++++.||+++.|
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~-~~~~v~~~g~~--~e~~~~l~~~dv~l~p   77 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRL-RRPNVRFHGFV--EELPEILAAADVGLIP   77 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCH-HHCTEEEE-S---HHHHHHHHC-SEEEE-
T ss_pred             ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHh-cCCCEEEcCCH--HHHHHHHHhCCEEEEE
Confidence            57899999999999999999 76554    7999999998765  35555 34599999999  7999999999999999


Q ss_pred             CC-CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          258 SE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       258 s~-~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      +. .+++|++++|||++|+|||+++. +..++.   .....|.++ .+|+++++++|.++++|
T Consensus        78 ~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~---~~~~~~~~~-~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   78 SRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIV---EEDGCGVLV-ANDPEELAEAIERLLND  135 (135)
T ss_dssp             BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS------SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred             eeCCCcCcHHHHHHHHhCCCEEECCc-chhhhe---eecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence            86 67899999999999999999998 566666   445677676 78999999999999865

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.74  E-value=4e-16  Score=141.49  Aligned_cols=259  Identities=15%  Similarity=0.112  Sum_probs=162.7

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....++.+++++++||+|++.+...+.+.....++..|+|+++.+.   |...     .|...    ..+.+.+.+|.++
T Consensus        76 ~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~---P~~w-----aw~~~----~~r~l~~~~d~v~  143 (385)
T TIGR00215        76 KIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS---PQVW-----AWRKW----RAKKIEKATDFLL  143 (385)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC---CcHh-----hcCcc----hHHHHHHHHhHhh
Confidence            3455777889999999999998644444444467888999986431   2211     11111    2567788999999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEE-e-eccc-cccHHHHHHHHHh
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV-G-RLGV-EKSLDFLKRVMDR  206 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-G-~~~~-~k~~~~l~~a~~~  206 (385)
                      +.++...+.+.+.+    .+..++.|++..............+.++.. +++.++++.+ | +..+ .|++..++++++.
T Consensus       144 ~~~~~e~~~~~~~g----~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl-~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~  218 (385)
T TIGR00215       144 AILPFEKAFYQKKN----VPCRFVGHPLLDAIPLYKPDRKSAREKLGI-DHNGETLALLPGSRGSEVEKLFPLFLKAAQL  218 (385)
T ss_pred             ccCCCcHHHHHhcC----CCEEEECCchhhhccccCCCHHHHHHHcCC-CCCCCEEEEECCCCHHHHHHhHHHHHHHHHH
Confidence            99999998887643    256678888743322111122223333333 3455666544 4 4444 5788888888766


Q ss_pred             C----CCceEEEEe-CCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          207 L----PEARIAFIG-DGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       207 ~----~~~~l~i~G-~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      +    |+.++++.+ .+...+.+++....    ..+.+.+    .++..+|+.||++|.+|     |.+++|+|++|+|+
T Consensus       219 l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~  289 (385)
T TIGR00215       219 LEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID----GDARKAMFAADAALLAS-----GTAALEAALIKTPM  289 (385)
T ss_pred             HHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC----chHHHHHHhCCEEeecC-----CHHHHHHHHcCCCE
Confidence            5    567776654 44444444444332    2344433    35678999999999999     77778999999999


Q ss_pred             EEec-CCC----------------CCcccccCCCCCe--eEeeCCCCHHHHHHHHhHhhcCH----HHHHHHHHHHHHHH
Q 016648          278 VGVR-AGG----------------IPDIIPEDQDGKI--GYLFNPGDLDDCLSKLEPLLYNQ----ELRETMGQAARQEM  334 (385)
Q Consensus       278 I~s~-~~~----------------~~e~~~~~~~~~~--g~~~~~~~~~~l~~~i~~ll~~~----~~~~~~~~~a~~~~  334 (385)
                      |... .+.                ++.++   .+...  -++-+.-+++.+++.+.++++|+    +.++++.+.-.+..
T Consensus       290 Vv~yk~~pl~~~~~~~~~~~~~~~~~nil---~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  366 (385)
T TIGR00215       290 VVGYRMKPLTFLIARRLVKTDYISLPNIL---ANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR  366 (385)
T ss_pred             EEEEcCCHHHHHHHHHHHcCCeeeccHHh---cCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence            8762 111                12222   11111  11222347899999999999999    87777777666555


Q ss_pred             HhC
Q 016648          335 EKY  337 (385)
Q Consensus       335 ~~~  337 (385)
                      ++.
T Consensus       367 ~~l  369 (385)
T TIGR00215       367 QRI  369 (385)
T ss_pred             HHh
Confidence            544

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.73  E-value=4.5e-16  Score=144.74  Aligned_cols=204  Identities=17%  Similarity=0.138  Sum_probs=159.3

Q ss_pred             HHHhCCeEEEcChhHHHHHHHhccc--CCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEe--ecccccc
Q 016648          121 LHRAADLTLVPSVAIGKDLEAARVT--AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG--RLGVEKS  196 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~~~~--~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G--~~~~~k~  196 (385)
                      .+..+|.+|+.++...+.+...+..  ...++..||.+.- ... +..           ....+..+++++  |+ +.|.
T Consensus       269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~~~-----------s~r~~~~~I~v~idrL-~ek~  334 (519)
T TIGR03713       269 SLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-LGQ-----------SQQLYETEIGFWIDGL-SDEE  334 (519)
T ss_pred             ChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-cCh-----------hhcccceEEEEEcCCC-ChHH
Confidence            3578999999998888877766541  1134556664433 111 110           112334688888  99 9999


Q ss_pred             HHHHHHHHHhC----CCceEEEEeCCccH---HHHH----HHHcC-----------------------------CCeEEe
Q 016648          197 LDFLKRVMDRL----PEARIAFIGDGPYR---EELE----KMFTG-----------------------------MPAVFT  236 (385)
Q Consensus       197 ~~~l~~a~~~~----~~~~l~i~G~g~~~---~~l~----~~~~~-----------------------------~~i~~~  236 (385)
                      ++.+++++.++    |+++|.+.|.+...   +.++    ++..+                             ..|.+.
T Consensus       335 ~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~  414 (519)
T TIGR03713       335 LQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFT  414 (519)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEE
Confidence            99888877654    89999999965432   3332    22112                             468899


Q ss_pred             cccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHh
Q 016648          237 GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL  316 (385)
Q Consensus       237 g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~l  316 (385)
                      |+.+..++.+.|+.+.++|.+|..|+++ +.+||+++|+|+|   .-+..+++   .++.||+++  +|.++|++++..+
T Consensus       415 gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V---~d~~NG~li--~d~~~l~~al~~~  485 (519)
T TIGR03713       415 TLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYV---EHNKNGYII--DDISELLKALDYY  485 (519)
T ss_pred             ecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceee---EcCCCcEEe--CCHHHHHHHHHHH
Confidence            9997779999999999999999999999 9999999999999   33458899   899999999  5999999999999


Q ss_pred             hcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          317 LYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       317 l~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      +.+++.++.+...+.+.+++||-+++.+++.
T Consensus       486 L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~  516 (519)
T TIGR03713       486 LDNLKNWNYSLAYSIKLIDDYSSENIIERLN  516 (519)
T ss_pred             HhCHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            9999999999999999999999999999885

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.71  E-value=2.8e-16  Score=143.84  Aligned_cols=278  Identities=19%  Similarity=0.215  Sum_probs=168.3

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHh
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  142 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~  142 (385)
                      .-|+|++|++..+.++.++..+..+.++.+.+|..+|....-....+.    . -.-..+-.||.|-+.+....+.+...
T Consensus       141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r----~-eiL~glL~aDlIgFqt~~~~~nFl~~  215 (474)
T PF00982_consen  141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWR----E-EILRGLLGADLIGFQTFEYARNFLSC  215 (474)
T ss_dssp             TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTTH----H-HHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCcH----H-HHHHHhhcCCEEEEecHHHHHHHHHH
Confidence            449999999988888887766667889999999988764322221211    1 12224567999999999888877544


Q ss_pred             c----cc--CC-----------CcEEEeeCCCCCCCCCCCCC---ChhhHhhhcCCCCC-CcEEEEEeeccccccHHHHH
Q 016648          143 R----VT--AA-----------NKIRIWKKGVDSESFHPRFR---SSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLK  201 (385)
Q Consensus       143 ~----~~--~~-----------~~i~vi~~~v~~~~~~~~~~---~~~~~~~~~~~~~~-~~~i~~~G~~~~~k~~~~l~  201 (385)
                      .    +.  ..           -++.+.|-|+|++.+.....   ..+...++.....+ ..+|+-+.+++..||+..=+
T Consensus       216 ~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl  295 (474)
T PF00982_consen  216 CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKL  295 (474)
T ss_dssp             HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHH
T ss_pred             HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHH
Confidence            2    10  11           13667888888876643211   11111222222334 48899999999999999888


Q ss_pred             HHHHhC----C----CceEEEEeC-----Cc----cHHHHHHHHcC-------C---CeE-EecccChHHHHHHHHhCcE
Q 016648          202 RVMDRL----P----EARIAFIGD-----GP----YREELEKMFTG-------M---PAV-FTGMLLGEELSQAYASGDV  253 (385)
Q Consensus       202 ~a~~~~----~----~~~l~i~G~-----g~----~~~~l~~~~~~-------~---~i~-~~g~~~~~~~~~~~~~adi  253 (385)
                      +|++++    |    ++.|+-++.     .+    ..+++.+++.+       .   .|. +.+.++.+++..+|+.||+
T Consensus       296 ~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv  375 (474)
T PF00982_consen  296 RAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADV  375 (474)
T ss_dssp             HHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SE
T ss_pred             HHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhh
Confidence            888765    3    456665552     11    12333333321       1   244 5667999999999999999


Q ss_pred             EEEcCCCCCCcHHHHHHHhcCCc----EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHH
Q 016648          254 FVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQ  328 (385)
Q Consensus       254 ~v~ps~~e~~~~~~~Ea~a~G~P----vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~  328 (385)
                      ++.++..+|+.++..|+.+|..+    +|.|...|..+.+     +...++++|.|.++++++|.++++ .+++++...+
T Consensus       376 ~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~  450 (474)
T PF00982_consen  376 ALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-----SEAALLVNPWDIEEVADAIHEALTMPPEERKERHA  450 (474)
T ss_dssp             EEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT------TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHH
T ss_pred             EEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc-----CCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHH
Confidence            99999999999999999999765    7788888888887     334589999999999999999999 5567777777


Q ss_pred             HHHHHHHhCCHHHHHHHHHHHH
Q 016648          329 AARQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       329 ~a~~~~~~~s~~~~~~~~~~~i  350 (385)
                      ..++.+.+++...+++.+++.+
T Consensus       451 ~~~~~v~~~~~~~W~~~~l~~L  472 (474)
T PF00982_consen  451 RLREYVREHDVQWWAESFLRDL  472 (474)
T ss_dssp             HHHHHHHHT-HHHHHHHHHHHH
T ss_pred             HHHHHhHhCCHHHHHHHHHHHh
Confidence            7888889999999999988654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.71  E-value=1.2e-15  Score=137.77  Aligned_cols=276  Identities=16%  Similarity=0.094  Sum_probs=197.0

Q ss_pred             CEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc-
Q 016648           65 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-  143 (385)
Q Consensus        65 DiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-  143 (385)
                      |+|++|+++.+.++.++-.+..+.++.+.+|-.+|....-....+..    .+. ..+-.+|.|-+.+....+.+.+.. 
T Consensus       125 D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r~----eil-~glL~aDlIGFqt~~y~rnFl~~~~  199 (474)
T PRK10117        125 DIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHD----ELL-EQLCDYDLLGFQTENDRLAFLDCLS  199 (474)
T ss_pred             CEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCChH----HHH-HHHHhCccceeCCHHHHHHHHHHHH
Confidence            89999999888887776666677899999999887643222222211    122 234569999999988887776521 


Q ss_pred             ---cc------------CCCcEEEeeCCCCCCCCCCCCCC--hhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          144 ---VT------------AANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       144 ---~~------------~~~~i~vi~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                         +.            ..-++.+.|-|||++.+......  .....++.....++.+|+-+.|++.-||+..=++|+++
T Consensus       200 ~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~  279 (474)
T PRK10117        200 NLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEA  279 (474)
T ss_pred             HHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHH
Confidence               10            01236678889998776432221  11112222223467789999999999999988888877


Q ss_pred             C----C----CceEEEEeCC-----c----cHHHHHHHHcCC----------CeE-EecccChHHHHHHHHhCcEEEEcC
Q 016648          207 L----P----EARIAFIGDG-----P----YREELEKMFTGM----------PAV-FTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       207 ~----~----~~~l~i~G~g-----~----~~~~l~~~~~~~----------~i~-~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      +    |    ++.++-++..     +    ...++++++.+.          .|. +...++.+++..+|+.||+++.++
T Consensus       280 fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTp  359 (474)
T PRK10117        280 LLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTP  359 (474)
T ss_pred             HHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecc
Confidence            5    3    4556655521     1    122333333221          144 456789999999999999999999


Q ss_pred             CCCCCcHHHHHHHhcCC-----cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHH
Q 016648          259 ESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQ  332 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~-----PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~  332 (385)
                      ..+|+.++..|+.+|-.     .+|.|...|..+.+   .   ..++++|.|.++++++|.++++ .++++++..+..++
T Consensus       360 lRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L---~---~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~  433 (474)
T PRK10117        360 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLD  433 (474)
T ss_pred             cccccccccchheeeecCCCCccEEEecccchHHHh---C---CCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999999999999965     37889998888887   3   3689999999999999999999 45667777777778


Q ss_pred             HHHhCCHHHHHHHHHHHHH
Q 016648          333 EMEKYDWRAATRTIRNEQY  351 (385)
Q Consensus       333 ~~~~~s~~~~~~~~~~~iy  351 (385)
                      .+.+++...+++.+++.+-
T Consensus       434 ~v~~~dv~~W~~~fL~~L~  452 (474)
T PRK10117        434 VIVKNDINHWQECFISDLK  452 (474)
T ss_pred             HhhhCCHHHHHHHHHHHHH
Confidence            8889999999999986553

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=1.9e-14  Score=127.28  Aligned_cols=259  Identities=17%  Similarity=0.202  Sum_probs=177.5

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...+.++++++++||+|+..+. ....+..+.++..++|++....+..+..               ..+...+.++.|.+
T Consensus        79 ~~~~a~~il~~~kPd~vig~Gg-yvs~P~~~Aa~~~~iPv~ihEqn~~~G~---------------ank~~~~~a~~V~~  142 (357)
T COG0707          79 GVLQARKILKKLKPDVVIGTGG-YVSGPVGIAAKLLGIPVIIHEQNAVPGL---------------ANKILSKFAKKVAS  142 (357)
T ss_pred             HHHHHHHHHHHcCCCEEEecCC-ccccHHHHHHHhCCCCEEEEecCCCcch---------------hHHHhHHhhceeee
Confidence            3557788999999999999876 3345566778889999998666654332               45667788998887


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEe-eccccccHHHHHHHHHhCCC
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSLDFLKRVMDRLPE  209 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~k~~~~l~~a~~~~~~  209 (385)
                      .-+.     ...+ .+++++.+..+++..+... ... ...+  ... ..++++|+.+| +.+...--+.+.++...+.+
T Consensus       143 ~f~~-----~~~~-~~~~~~~~tG~Pvr~~~~~-~~~-~~~~--~~~-~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~  211 (357)
T COG0707         143 AFPK-----LEAG-VKPENVVVTGIPVRPEFEE-LPA-AEVR--KDG-RLDKKTILVTGGSQGAKALNDLVPEALAKLAN  211 (357)
T ss_pred             cccc-----cccc-CCCCceEEecCcccHHhhc-cch-hhhh--hhc-cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh
Confidence            7665     1122 2456788999999877665 211 1111  111 12566666555 45555544555566666664


Q ss_pred             -ceEEE-EeCCccHHHHHHHHcCCC-eEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC-
Q 016648          210 -ARIAF-IGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-  285 (385)
Q Consensus       210 -~~l~i-~G~g~~~~~l~~~~~~~~-i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~-  285 (385)
                       ++++. +|.+. .+++.....+.+ +.+.+|.  ++|..+|+.||++|.=    +.++++.|.+++|+|.|.-+.+.. 
T Consensus       212 ~~~v~~~~G~~~-~~~~~~~~~~~~~~~v~~f~--~dm~~~~~~ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~  284 (357)
T COG0707         212 RIQVIHQTGKND-LEELKSAYNELGVVRVLPFI--DDMAALLAAADLVISR----AGALTIAELLALGVPAILVPYPPGA  284 (357)
T ss_pred             CeEEEEEcCcch-HHHHHHHHhhcCcEEEeeHH--hhHHHHHHhccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCc
Confidence             66554 44444 556666555555 8888998  8999999999999943    458999999999999997765433 


Q ss_pred             -------CcccccCCCCCeeEeeCCCC--HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 016648          286 -------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  346 (385)
Q Consensus       286 -------~e~~~~~~~~~~g~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  346 (385)
                             ...+   .+...+.+++..+  ++++.+.|.+++++++..++|.+++++....-.-+.+++..
T Consensus       285 ~~~Q~~NA~~l---~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~  351 (357)
T COG0707         285 DGHQEYNAKFL---EKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLL  351 (357)
T ss_pred             cchHHHHHHHH---HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence                   2334   4455666666544  88999999999999999999999998776544444444443

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.68  E-value=1.1e-14  Score=131.00  Aligned_cols=293  Identities=17%  Similarity=0.197  Sum_probs=207.2

Q ss_pred             ccccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           47 LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        47 ~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .+..+..++.+..+..  |+|++|+++.+.++.++-.+....++.+.+|-.+|...--....+..     -.-..+-.||
T Consensus       133 vN~~FAd~i~~~~~~g--DiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~-----eIl~gll~~d  205 (486)
T COG0380         133 VNRKFADKIVEIYEPG--DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWRE-----EILEGLLGAD  205 (486)
T ss_pred             HHHHHHHHHHHhcCCC--CEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHH-----HHHHHhhcCC
Confidence            4455556666666666  99999999888888877777778889999999887643221111111     1122356699


Q ss_pred             eEEEcChhHHHHHHHhccc-----------------CCCcEEEeeCCCCCCCCCCCCCChh----hHhhhcCCCCCCcEE
Q 016648          127 LTLVPSVAIGKDLEAARVT-----------------AANKIRIWKKGVDSESFHPRFRSSE----MRWRLSNGEPDKPLI  185 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~-----------------~~~~i~vi~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~i  185 (385)
                      .|-+.++..++.+......                 ...++..+|-|+|+..+........    ...-......++.+|
T Consensus       206 ligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kii  285 (486)
T COG0380         206 LIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLI  285 (486)
T ss_pred             eeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEE
Confidence            9999998888877554210                 1145677899999887754332211    111111122347889


Q ss_pred             EEEeeccccccHHHHHHHHHhC----C----CceEEEEeCCc---------cHHHHHHHHcCC----------Ce-EEec
Q 016648          186 VHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGP---------YREELEKMFTGM----------PA-VFTG  237 (385)
Q Consensus       186 ~~~G~~~~~k~~~~l~~a~~~~----~----~~~l~i~G~g~---------~~~~l~~~~~~~----------~i-~~~g  237 (385)
                      +.+.|++.-||+..=+.|++++    |    ++.++-++...         ....++....+.          .| .+.-
T Consensus       286 vgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~  365 (486)
T COG0380         286 VGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR  365 (486)
T ss_pred             EEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEec
Confidence            9999999999998888888776    3    45555555221         122233332211          23 4566


Q ss_pred             ccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC----CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHH
Q 016648          238 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  313 (385)
Q Consensus       238 ~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G----~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i  313 (385)
                      .++.+++..+|+.||+++..+..+|+.++..|+.+|-    -+.|.|...|....+   .+   .++++|.|.++++++|
T Consensus       366 ~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L---~~---AliVNP~d~~~va~ai  439 (486)
T COG0380         366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL---RD---ALIVNPWDTKEVADAI  439 (486)
T ss_pred             cCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh---cc---CEeECCCChHHHHHHH
Confidence            6999999999999999999999999999999999984    477888887777777   22   6899999999999999


Q ss_pred             hHhhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 016648          314 EPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  352 (385)
Q Consensus       314 ~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~  352 (385)
                      .++++ .++++++.-+..++.+.+++...+++.+++.+.+
T Consensus       440 ~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~  479 (486)
T COG0380         440 KRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            99998 5667777777777888889999999998876655

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.66  E-value=7.1e-15  Score=133.60  Aligned_cols=242  Identities=16%  Similarity=0.180  Sum_probs=144.0

Q ss_pred             HHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhH----hh-------h-----cCC
Q 016648          115 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR----WR-------L-----SNG  178 (385)
Q Consensus       115 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~----~~-------~-----~~~  178 (385)
                      ..+++.....||.+.++|+-++.+.......+  +=.|+|||++.+.++...+-+..+    .+       .     ...
T Consensus       212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~--pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd  289 (633)
T PF05693_consen  212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRK--PDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFD  289 (633)
T ss_dssp             HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-
T ss_pred             HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCC--CCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence            45788889999999999999999988765432  225789999998876654322111    01       0     112


Q ss_pred             CCCCcEEEEEeeccc-cccHHHHHHHHHhCC--------Cce---EEEEeC-----------------------------
Q 016648          179 EPDKPLIVHVGRLGV-EKSLDFLKRVMDRLP--------EAR---IAFIGD-----------------------------  217 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~-~k~~~~l~~a~~~~~--------~~~---l~i~G~-----------------------------  217 (385)
                      +++..+|...||... .||+|.+++|+.++.        +..   |+|+-.                             
T Consensus       290 ~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~  369 (633)
T PF05693_consen  290 LDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEK  369 (633)
T ss_dssp             GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHH
Confidence            234566778888855 599999999998761        222   333210                             


Q ss_pred             -----------C--cc---------HHHHHHHH----------------------------cC--------C--CeEEec
Q 016648          218 -----------G--PY---------REELEKMF----------------------------TG--------M--PAVFTG  237 (385)
Q Consensus       218 -----------g--~~---------~~~l~~~~----------------------------~~--------~--~i~~~g  237 (385)
                                 |  +.         .-.+++.+                            ++        .  +|+|++
T Consensus       370 ~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P  449 (633)
T PF05693_consen  370 IGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHP  449 (633)
T ss_dssp             HHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--
T ss_pred             HHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEee
Confidence                       0  00         00011100                            00        0  144543


Q ss_pred             -ccC------hHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCC--CCCeeEee-C--CCC
Q 016648          238 -MLL------GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ--DGKIGYLF-N--PGD  305 (385)
Q Consensus       238 -~~~------~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~--~~~~g~~~-~--~~~  305 (385)
                       +++      .-+..+++..||+.|+||.+|++|.+.+|+.++|+|.|+|+..|...++....  ....|+.+ +  ..+
T Consensus       450 ~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n  529 (633)
T PF05693_consen  450 EYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKN  529 (633)
T ss_dssp             S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-
T ss_pred             ccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCC
Confidence             222      23578999999999999999999999999999999999999998876663211  12234433 3  224


Q ss_pred             HH----HHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          306 LD----DCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       306 ~~----~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      .+    ++++.|.+... +...+..++.++.+..+..+|+.....|. +.|+.++.+..
T Consensus       530 ~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~-~Ay~~AL~~a~  587 (633)
T PF05693_consen  530 YDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE-KAYDLALRRAY  587 (633)
T ss_dssp             HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH-HHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHhcC
Confidence            44    44555555444 56677788888888888999999999997 68998887643

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.66  E-value=5.6e-14  Score=134.80  Aligned_cols=294  Identities=18%  Similarity=0.162  Sum_probs=203.2

Q ss_pred             cCCCEEEeCCCchhHHHHH----HHHH----------HhCCCEEEEEecCCCcccccccccccch---------------
Q 016648           62 FKPDIIHASSPGIMVFGAL----IIAK----------LLCVPIVMSYHTHVPVYIPRYTFSWLVK---------------  112 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~----~~~~----------~~~~p~v~~~h~~~~~~~~~~~~~~~~~---------------  112 (385)
                      .+||+||+|++++...+.-    ++..          ..+..+++|.|+..+.....+....+.+               
T Consensus       247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~  326 (778)
T cd04299         247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR  326 (778)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence            4899999999865544431    1111          1246789999997654321111110000               


Q ss_pred             -------------hHHHHHHHHHHhCCeEEEcChhHHHHHHHhcc-------cCCCcEEEeeCCCCCCCCC-CCC-----
Q 016648          113 -------------PMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-------TAANKIRIWKKGVDSESFH-PRF-----  166 (385)
Q Consensus       113 -------------~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~-------~~~~~i~vi~~~v~~~~~~-~~~-----  166 (385)
                                   -.-.+.+..+..|+.+-++|+-..+..++.+.       ....++.-|-|||+...+. |..     
T Consensus       327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~  406 (778)
T cd04299         327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYD  406 (778)
T ss_pred             HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHH
Confidence                         01135677788999999999987655555331       1145688999999998766 210     


Q ss_pred             -----------------------CChh-------hHhhh--------------------------cCCCCCCcEEEEEee
Q 016648          167 -----------------------RSSE-------MRWRL--------------------------SNGEPDKPLIVHVGR  190 (385)
Q Consensus       167 -----------------------~~~~-------~~~~~--------------------------~~~~~~~~~i~~~G~  190 (385)
                                             ...+       .+.++                          ....++.+++++++|
T Consensus       407 ~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarR  486 (778)
T cd04299         407 RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARR  486 (778)
T ss_pred             HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeec
Confidence                                   0100       00000                          012345678999999


Q ss_pred             ccccccHHHHHHHHHhC--------CCceEEEEeCCcc--------HHHHHHHHcC----CCeEEecccChHHHHHHHHh
Q 016648          191 LGVEKSLDFLKRVMDRL--------PEARIAFIGDGPY--------REELEKMFTG----MPAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       191 ~~~~k~~~~l~~a~~~~--------~~~~l~i~G~g~~--------~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~  250 (385)
                      +...|+.++++..+.++        .++++++.|++..        .+.+.++..+    .+|.|+...+-.-...+++.
T Consensus       487 fa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG  566 (778)
T cd04299         487 FATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQG  566 (778)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhh
Confidence            99999999998876655        3689999996541        1233334442    26888877776677788999


Q ss_pred             CcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCC------------CCHHHHHHHHhHh
Q 016648          251 GDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP------------GDLDDCLSKLEPL  316 (385)
Q Consensus       251 adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~------------~~~~~l~~~i~~l  316 (385)
                      ||+.++||+  .|++|++=+-||.-|.+-+++-.|...|..    ++.||+.+..            .|+++|.+.+++.
T Consensus       567 ~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~----~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~  642 (778)
T cd04299         567 VDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY----DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENE  642 (778)
T ss_pred             hhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc----CCCCceEeCCCccccChhhcchhhHHHHHHHHHHH
Confidence            999999999  999999999999999999999888888776    5789999987            5677777777653


Q ss_pred             hc----C------HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          317 LY----N------QELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       317 l~----~------~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      +-    +      |..+.+|.+++.... ..|||++++++|.+.+|.-+....+
T Consensus       643 i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~~~~~  696 (778)
T cd04299         643 VIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPAARRGR  696 (778)
T ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHHHHHH
Confidence            32    2      566777777777765 6899999999999999987766544

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.63  E-value=2.5e-13  Score=123.53  Aligned_cols=192  Identities=11%  Similarity=0.149  Sum_probs=142.1

Q ss_pred             HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHH
Q 016648          123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  202 (385)
Q Consensus       123 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~  202 (385)
                      .+.|.||+.++...+.+.+.+. +..++.++|-|+-..   ...           ....+..+++++.   ..-++.+.+
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i~~---~~~-----------~~r~~~~~l~~t~---s~~I~~i~~  299 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYLYP---FKK-----------DNKYRKQALILTN---SDQIEHLEE  299 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEEEe---ecc-----------ccCCcccEEEECC---HHHHHHHHH
Confidence            7889999999998888888775 356777788776421   110           1112345666662   445666667


Q ss_pred             HHHhCCCceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          203 VMDRLPEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       203 a~~~~~~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +.+++|+++|.| |.+.+ .+++.++....|++..+.+...++.++|..||+++..+..|+++.++.||+..|+||++.+
T Consensus       300 Lv~~lPd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd  378 (438)
T TIGR02919       300 IVQALPDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFE  378 (438)
T ss_pred             HHHhCCCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEe
Confidence            777889999999 75554 5677676444576666665556899999999999999999999999999999999999998


Q ss_pred             CC-CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCH
Q 016648          282 AG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW  339 (385)
Q Consensus       282 ~~-~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~  339 (385)
                      .. +..+++   .+   |.+++.+++++++++|.+++.+++..++.-..-++.+..-+.
T Consensus       379 ~t~~~~~~i---~~---g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~  431 (438)
T TIGR02919       379 ETAHNRDFI---AS---ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISK  431 (438)
T ss_pred             cccCCcccc---cC---CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCH
Confidence            76 334555   33   789999999999999999999997666554444444433333

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.62  E-value=8.3e-14  Score=136.18  Aligned_cols=278  Identities=14%  Similarity=0.139  Sum_probs=196.0

Q ss_pred             CEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc-
Q 016648           65 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-  143 (385)
Q Consensus        65 DiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-  143 (385)
                      |+|++|+++.+.++.++..+....++.+.+|..+|....-....+..     -.-..+-.||.|-+.+...++.+.+.. 
T Consensus       203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~-----eiL~glL~aDlIGFht~~yar~Fl~~~~  277 (854)
T PLN02205        203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIRE-----ELLRALLNSDLIGFHTFDYARHFLSCCS  277 (854)
T ss_pred             CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHH-----HHHHHHhcCCeEEecCHHHHHHHHHHHH
Confidence            89999999888888777666678899999999887643222222111     222345679999999988888776521 


Q ss_pred             ---cc---------------CCCcEEEeeCCCCCCCCCCCCCChh---hHhhhc--CCCCCCcEEEEEeeccccccHHHH
Q 016648          144 ---VT---------------AANKIRIWKKGVDSESFHPRFRSSE---MRWRLS--NGEPDKPLIVHVGRLGVEKSLDFL  200 (385)
Q Consensus       144 ---~~---------------~~~~i~vi~~~v~~~~~~~~~~~~~---~~~~~~--~~~~~~~~i~~~G~~~~~k~~~~l  200 (385)
                         +.               ..-++.+.|-|||.+.+.......+   ...++.  ...+++.+|+-+.+++.-||+..=
T Consensus       278 r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~k  357 (854)
T PLN02205        278 RMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLK  357 (854)
T ss_pred             HHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHH
Confidence               10               1123667888999887644322211   111111  112357889999999999999988


Q ss_pred             HHHHHhC----CC----ceEEEEeC-----CccHHHH----HHHHcCC----------CeEE-ecccChHHHHHHHHhCc
Q 016648          201 KRVMDRL----PE----ARIAFIGD-----GPYREEL----EKMFTGM----------PAVF-TGMLLGEELSQAYASGD  252 (385)
Q Consensus       201 ~~a~~~~----~~----~~l~i~G~-----g~~~~~l----~~~~~~~----------~i~~-~g~~~~~~~~~~~~~ad  252 (385)
                      +.|++++    |+    +.++-+..     ++..+++    .+++.+.          .|++ ...++.+++..+|+.||
T Consensus       358 l~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~AD  437 (854)
T PLN02205        358 LLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAE  437 (854)
T ss_pred             HHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhcc
Confidence            8888775    43    45554542     2222222    2322211          2454 47789999999999999


Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCC-------------------cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHH
Q 016648          253 VFVMPSESETLGLVVLEAMSSGI-------------------PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  313 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~-------------------PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i  313 (385)
                      +++.++..+|+.++..|+.+|..                   .+|.|...|....+   .   ..+.++|.|.++++++|
T Consensus       438 v~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L---~---~Ai~VNP~d~~~~a~ai  511 (854)
T PLN02205        438 CCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL---S---GAIRVNPWNIDAVADAM  511 (854)
T ss_pred             EEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh---C---cCeEECCCCHHHHHHHH
Confidence            99999999999999999999854                   36778877777666   2   36899999999999999


Q ss_pred             hHhhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          314 EPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       314 ~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                      .++++ .+++++...++.++++.+++...+++.++.++.+.
T Consensus       512 ~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~  552 (854)
T PLN02205        512 DSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT  552 (854)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            99999 45566666667777888999999999998766543

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.56  E-value=3.5e-14  Score=101.50  Aligned_cols=90  Identities=29%  Similarity=0.503  Sum_probs=83.8

Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHH
Q 016648          253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  332 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~  332 (385)
                      +++.|+..++++.+++|+|+||+|+|+++.+++.+++   .++..++.++  |++++.+++..+++|++.+++++++|++
T Consensus         1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~---~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~   75 (92)
T PF13524_consen    1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIF---EDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARE   75 (92)
T ss_pred             CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHc---CCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence            3677888899999999999999999999999999999   8888999888  9999999999999999999999999999


Q ss_pred             HH-HhCCHHHHHHHHH
Q 016648          333 EM-EKYDWRAATRTIR  347 (385)
Q Consensus       333 ~~-~~~s~~~~~~~~~  347 (385)
                      .+ ++|+|++.+++++
T Consensus        76 ~v~~~~t~~~~~~~il   91 (92)
T PF13524_consen   76 RVLKRHTWEHRAEQIL   91 (92)
T ss_pred             HHHHhCCHHHHHHHHH
Confidence            98 4799999999886

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.55  E-value=2.1e-12  Score=115.62  Aligned_cols=236  Identities=18%  Similarity=0.194  Sum_probs=146.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..+..+++++++||+|+.++. ...++..+.++..++|+++.-.+..+               ....+.+.+.++.+++.
T Consensus        80 ~~~~~~i~~~~kPdvvi~~Gg-y~s~p~~~aa~~~~~p~~i~e~n~~~---------------g~~nr~~~~~a~~v~~~  143 (352)
T PRK12446         80 VMDAYVRIRKLKPDVIFSKGG-FVSVPVVIGGWLNRVPVLLHESDMTP---------------GLANKIALRFASKIFVT  143 (352)
T ss_pred             HHHHHHHHHhcCCCEEEecCc-hhhHHHHHHHHHcCCCEEEECCCCCc---------------cHHHHHHHHhhCEEEEE
Confidence            346668899999999999875 44555677889999999873333211               11456778999999887


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEe-eccccccH-HHHHHHHHhC-C
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSL-DFLKRVMDRL-P  208 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~k~~-~~l~~a~~~~-~  208 (385)
                      -+...+.+      +.+++.+..+++..+.....  ....+..+.. .+++++++.+| +.+. +.+ +.+.+++..+ .
T Consensus       144 f~~~~~~~------~~~k~~~tG~Pvr~~~~~~~--~~~~~~~~~l-~~~~~~iLv~GGS~Ga-~~in~~~~~~l~~l~~  213 (352)
T PRK12446        144 FEEAAKHL------PKEKVIYTGSPVREEVLKGN--REKGLAFLGF-SRKKPVITIMGGSLGA-KKINETVREALPELLL  213 (352)
T ss_pred             ccchhhhC------CCCCeEEECCcCCccccccc--chHHHHhcCC-CCCCcEEEEECCccch-HHHHHHHHHHHHhhcc
Confidence            65433222      34688888888877654322  1222222322 33455655554 4443 444 4455556555 3


Q ss_pred             CceEEE-EeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC---
Q 016648          209 EARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG---  284 (385)
Q Consensus       209 ~~~l~i-~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~---  284 (385)
                      +++++. +|.....+.... .  .++...+++ .+++.++|+.||++|.    -+.++++.|++++|+|.|......   
T Consensus       214 ~~~vv~~~G~~~~~~~~~~-~--~~~~~~~f~-~~~m~~~~~~adlvIs----r~G~~t~~E~~~~g~P~I~iP~~~~~~  285 (352)
T PRK12446        214 KYQIVHLCGKGNLDDSLQN-K--EGYRQFEYV-HGELPDILAITDFVIS----RAGSNAIFEFLTLQKPMLLIPLSKFAS  285 (352)
T ss_pred             CcEEEEEeCCchHHHHHhh-c--CCcEEecch-hhhHHHHHHhCCEEEE----CCChhHHHHHHHcCCCEEEEcCCCCCC
Confidence            566554 454432222222 1  244555665 2579999999999994    445889999999999999886531   


Q ss_pred             ------CCcccccCCCCCeeEeeC--CCCHHHHHHHHhHhhcCHHHHH
Q 016648          285 ------IPDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRE  324 (385)
Q Consensus       285 ------~~e~~~~~~~~~~g~~~~--~~~~~~l~~~i~~ll~~~~~~~  324 (385)
                            ..+.+   .+...+..+.  .-+++.+.+++.++++|++.++
T Consensus       286 ~~~Q~~Na~~l---~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~  330 (352)
T PRK12446        286 RGDQILNAESF---ERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK  330 (352)
T ss_pred             CchHHHHHHHH---HHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence                  11233   2333444443  2368899999999998876543

>TIGR03492 conserved hypothetical protein

Probab=99.51  E-value=1e-11  Score=112.91  Aligned_cols=266  Identities=15%  Similarity=0.108  Sum_probs=165.5

Q ss_pred             HHHHHHhhcc--CCCEEEeCCCchhHHHHHHHHHHhCCCEEE-EEecCCCcc--cccc-----cccccch---hHHHHHH
Q 016648           53 PRIISEVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVM-SYHTHVPVY--IPRY-----TFSWLVK---PMWLVIK  119 (385)
Q Consensus        53 ~~l~~~i~~~--~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~-~~h~~~~~~--~~~~-----~~~~~~~---~~~~~~~  119 (385)
                      .+-.++++++  +||+|++.+...    ..++++..|+|+++ ..|......  .+.+     ..++...   .+ ...+
T Consensus        81 ~~~~~~~~~~~~~p~~v~~~Gg~v----~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e~n~  155 (396)
T TIGR03492        81 LGQWRALRKWAKKGDLIVAVGDIV----PLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-ERWL  155 (396)
T ss_pred             HHHHHHHHHHhhcCCEEEEECcHH----HHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH-HHHH
Confidence            3455677888  999999988533    45567889999876 334421110  0000     0011111   11 1245


Q ss_pred             HHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc--cccH
Q 016648          120 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSL  197 (385)
Q Consensus       120 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~  197 (385)
                      ...+.||.+++..+...+.+.+.+.    ++.++.|++-....... . .      ....+...+++..|+-..  .+++
T Consensus       156 l~~~~a~~v~~~~~~t~~~l~~~g~----k~~~vGnPv~d~l~~~~-~-~------~l~~~~~~lllLpGSR~ae~~~~l  223 (396)
T TIGR03492       156 MRSRRCLAVFVRDRLTARDLRRQGV----RASYLGNPMMDGLEPPE-R-K------PLLTGRFRIALLPGSRPPEAYRNL  223 (396)
T ss_pred             hhchhhCEEeCCCHHHHHHHHHCCC----eEEEeCcCHHhcCcccc-c-c------ccCCCCCEEEEECCCCHHHHHccH
Confidence            5668999999999999999887543    78888888744432111 1 0      111222344555565433  3567


Q ss_pred             HHHHHHHHhC---CCceEEEEe-CCccHHHHHHHHcCC------------------CeEEecccChHHHHHHHHhCcEEE
Q 016648          198 DFLKRVMDRL---PEARIAFIG-DGPYREELEKMFTGM------------------PAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       198 ~~l~~a~~~~---~~~~l~i~G-~g~~~~~l~~~~~~~------------------~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ..++++++.+   +++.+++.- .+...+.+++...+.                  ++.+..+.  +++..+|+.||++|
T Consensus       224 p~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADlvI  301 (396)
T TIGR03492       224 KLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADLGI  301 (396)
T ss_pred             HHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCEEE
Confidence            7888888887   467776643 444555565544321                  14555554  78999999999999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCCCC---cccccCCC-----CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGGIP---DIIPEDQD-----GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~---e~~~~~~~-----~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      ..|     |.+..|++++|+|+|....++..   .+.   +.     + .+......+++.+++++.++++|++.++++.
T Consensus       302 ~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~---~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll~d~~~~~~~~  372 (396)
T TIGR03492       302 AMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFA---EAQSRLLG-GSVFLASKNPEQAAQVVRQLLADPELLERCR  372 (396)
T ss_pred             ECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHH---HhhHhhcC-CEEecCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            876     56679999999999988743321   222   11     2 3344445678999999999999998888887


Q ss_pred             HHHHHHH-HhCCHHHHHHHH
Q 016648          328 QAARQEM-EKYDWRAATRTI  346 (385)
Q Consensus       328 ~~a~~~~-~~~s~~~~~~~~  346 (385)
                      +++++.. +....+.+++.+
T Consensus       373 ~~~~~~lg~~~a~~~ia~~i  392 (396)
T TIGR03492       373 RNGQERMGPPGASARIAESI  392 (396)
T ss_pred             HHHHHhcCCCCHHHHHHHHH
Confidence            5444443 334455554443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.48  E-value=2.4e-11  Score=109.49  Aligned_cols=267  Identities=15%  Similarity=0.137  Sum_probs=168.0

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...++.+++.+++||+|++++.....+++.+.+...++|++- +|+-....  .       ..-....+.+-+.++..++
T Consensus        81 ~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~--~-------~~eE~~r~~i~~la~l~f~  150 (365)
T TIGR03568        81 TIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE--G-------AIDESIRHAITKLSHLHFV  150 (365)
T ss_pred             HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC--C-------CchHHHHHHHHHHHhhccC
Confidence            456888999999999999999767777788889999999983 34421110  0       0112233445567789999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCC-CCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEee-----ccccccHHHHHHHH
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----LGVEKSLDFLKRVM  204 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-----~~~~k~~~~l~~a~  204 (385)
                      +++...+.+.+.+. ++.++.++.|. +|.-.............++....+.+.+++.+-+     ....+.+..+++++
T Consensus       151 ~t~~~~~~L~~eg~-~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L  229 (365)
T TIGR03568       151 ATEEYRQRVIQMGE-DPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKAL  229 (365)
T ss_pred             CCHHHHHHHHHcCC-CCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHH
Confidence            99999999988765 56788877764 3432211111222333333322222443333333     22234567777777


Q ss_pred             HhCC-CceEEEEe--CCc-c---HHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          205 DRLP-EARIAFIG--DGP-Y---REELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       205 ~~~~-~~~l~i~G--~g~-~---~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      .... ++  +++.  .++ .   .+.+.+... ..++.+.+.++..++..+++.|+++|.-|     +..+.||.++|+|
T Consensus       230 ~~~~~~~--~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdS-----Sggi~EA~~lg~P  302 (365)
T TIGR03568       230 DELNKNY--IFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNS-----SSGIIEAPSFGVP  302 (365)
T ss_pred             HHhccCC--EEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcC-----hhHHHhhhhcCCC
Confidence            6653 33  3332  212 1   334555443 35799999999999999999999999444     2334899999999


Q ss_pred             EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       277 vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      +|+  .+.-++.+   ..|.+.+.+ ..|.+++.+++.+++ +++.++.+     ... .-|...+.++++.
T Consensus       303 vv~--l~~R~e~~---~~g~nvl~v-g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~  362 (365)
T TIGR03568       303 TIN--IGTRQKGR---LRADSVIDV-DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERII  362 (365)
T ss_pred             EEe--ecCCchhh---hhcCeEEEe-CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHH
Confidence            995  44566766   667787766 458999999999954 44332222     111 2366666666665

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=1.4e-10  Score=101.59  Aligned_cols=267  Identities=16%  Similarity=0.166  Sum_probs=172.8

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.++++..+||++++.....+.. .+.-++..|+|+++.---.......      ..+....+.+.+++..|.|++
T Consensus       111 ~~~~v~rFl~~~~P~l~Ii~EtElWPn-li~e~~~~~~p~~LvNaRLS~rS~~------~y~k~~~~~~~~~~~i~li~a  183 (419)
T COG1519         111 LPIAVRRFLRKWRPKLLIIMETELWPN-LINELKRRGIPLVLVNARLSDRSFA------RYAKLKFLARLLFKNIDLILA  183 (419)
T ss_pred             chHHHHHHHHhcCCCEEEEEeccccHH-HHHHHHHcCCCEEEEeeeechhhhH------HHHHHHHHHHHHHHhcceeee
Confidence            456788999999999998876533332 2345677899998743222111111      112334577889999999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCC-CCCCChhhHhhhcCCCCC-CcEEEEEeeccccccHHHHHHHH----
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFH-PRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVM----  204 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~-~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~k~~~~l~~a~----  204 (385)
                      .|+..++.+.+.|..   ++.+..|-   .... +..........+....+. +++++..++...+  -+.++++.    
T Consensus       184 Qse~D~~Rf~~LGa~---~v~v~GNl---Kfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~GE--eei~l~~~~~l~  255 (419)
T COG1519         184 QSEEDAQRFRSLGAK---PVVVTGNL---KFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHEGE--EEIILDAHQALK  255 (419)
T ss_pred             cCHHHHHHHHhcCCc---ceEEecce---eecCCCChhhHHHHHHHHHhcCCCCceEEEecCCCch--HHHHHHHHHHHH
Confidence            999999999998752   36665552   1111 111111111111112222 7778887773222  22344544    


Q ss_pred             HhCCCceEEEEeCCccH-HHHHHHHcCC-----------------CeEEecccChHHHHHHHHhCcEEEEc-CCCCCCcH
Q 016648          205 DRLPEARIAFIGDGPYR-EELEKMFTGM-----------------PAVFTGMLLGEELSQAYASGDVFVMP-SESETLGL  265 (385)
Q Consensus       205 ~~~~~~~l~i~G~g~~~-~~l~~~~~~~-----------------~i~~~g~~~~~~~~~~~~~adi~v~p-s~~e~~~~  265 (385)
                      ++.|+..++++=..+++ +.+++++...                 +|.+...+  -||..+|.-+|+.++- |...-.|.
T Consensus       256 ~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv~~GGH  333 (419)
T COG1519         256 KQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLVPIGGH  333 (419)
T ss_pred             hhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCcccCCCCC
Confidence            44478888888866543 4555555432                 35555555  7899999999997664 55556678


Q ss_pred             HHHHHHhcCCcEEEecCC-CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh
Q 016648          266 VVLEAMSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  336 (385)
Q Consensus       266 ~~~Ea~a~G~PvI~s~~~-~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~  336 (385)
                      -++|+.++|+|||..... ...|+.......+.++.++  |.+.+++++..+++|++.++++++++...+.+
T Consensus       334 N~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~  403 (419)
T COG1519         334 NPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLAQ  403 (419)
T ss_pred             ChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            899999999999976432 3333332224556677776  68889999999988999999999999988743

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.34  E-value=1e-10  Score=103.80  Aligned_cols=256  Identities=18%  Similarity=0.178  Sum_probs=156.8

Q ss_pred             ccccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCC--EEEEEecCCCcccccccccccchhHHHHHHHHHHh
Q 016648           47 LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVP--IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  124 (385)
Q Consensus        47 ~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (385)
                      .-.....++.+.+++.+||++++-+.+.+.+......+..|++  +++.+-   |.-+     .|...    ..+.+.+.
T Consensus        66 ~~~~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---PqvW-----AWr~~----R~~~i~~~  133 (373)
T PF02684_consen   66 KLKRLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---PQVW-----AWRPG----RAKKIKKY  133 (373)
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---Ccee-----eeCcc----HHHHHHHH
Confidence            3444566777788899999999987655655555556677777  665432   2211     11111    34567788


Q ss_pred             CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc--cccHHHHHH
Q 016648          125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKR  202 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~~~l~~  202 (385)
                      +|.+++.-+...+.+.+.+.    ++..+.|++-.. ..+.......+... ...++..+.+..|+-..  .+.+..+++
T Consensus       134 ~D~ll~ifPFE~~~y~~~g~----~~~~VGHPl~d~-~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~  207 (373)
T PF02684_consen  134 VDHLLVIFPFEPEFYKKHGV----PVTYVGHPLLDE-VKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLE  207 (373)
T ss_pred             HhheeECCcccHHHHhccCC----CeEEECCcchhh-hccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHH
Confidence            99999999999999998763    677778775322 22222222222333 33444556777785432  355677788


Q ss_pred             HHHhC----CCceEEEEeCCccHHH-HHHHHcCC--CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC
Q 016648          203 VMDRL----PEARIAFIGDGPYREE-LEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  275 (385)
Q Consensus       203 a~~~~----~~~~l~i~G~g~~~~~-l~~~~~~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~  275 (385)
                      +++.+    |++++++.......+. +.+.....  ++.+.-  ...+-.+.|+.||+.+..|     |++.+|++.+|+
T Consensus       208 aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~  280 (373)
T PF02684_consen  208 AAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVI--IEGESYDAMAAADAALAAS-----GTATLEAALLGV  280 (373)
T ss_pred             HHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEE--cCCchHHHHHhCcchhhcC-----CHHHHHHHHhCC
Confidence            77655    7888888765443333 44433322  222221  1256778899999999777     999999999999


Q ss_pred             cEEEec-CC----------------CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHH
Q 016648          276 PVVGVR-AG----------------GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  328 (385)
Q Consensus       276 PvI~s~-~~----------------~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  328 (385)
                      |.|+.- .+                +++.++.+ +.-..=++-+..+++.+++++..+++|++.++....
T Consensus       281 P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~-~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~  349 (373)
T PF02684_consen  281 PMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAG-REVVPELIQEDATPENIAAELLELLENPEKRKKQKE  349 (373)
T ss_pred             CEEEEEcCcHHHHHHHHHhhcCCEeechhhhcC-CCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence            998632 11                12222200 000011223345899999999999999876444333

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.30  E-value=9.4e-11  Score=104.47  Aligned_cols=275  Identities=15%  Similarity=0.111  Sum_probs=153.0

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+.+.+.+||+|++++-....+++.+.+...++|+ .++|+-.-.+...  .+   ..-......+-+-|+..++
T Consensus        55 ~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ipv-~HieaGlRs~d~~--~g---~~de~~R~~i~~la~lhf~  128 (346)
T PF02350_consen   55 AIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIPV-AHIEAGLRSGDRT--EG---MPDEINRHAIDKLAHLHFA  128 (346)
T ss_dssp             HHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-EE-EEES-----S-TT--SS---TTHHHHHHHHHHH-SEEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCCE-EEecCCCCccccC--CC---Cchhhhhhhhhhhhhhhcc
Confidence            4567888999999999999998777788888889999995 4455421110000  00   1122244556688999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCCChhh-HhhhcCCCCCCcEEEEEeeccc---cccHHHHH---H
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEM-RWRLSNGEPDKPLIVHVGRLGV---EKSLDFLK---R  202 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~G~~~~---~k~~~~l~---~  202 (385)
                      .++..++.+.+.+. ++.+|.++.|.. |.-........... ........+++.+++..=+...   ......+.   +
T Consensus       129 ~t~~~~~~L~~~G~-~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~  207 (346)
T PF02350_consen  129 PTEEARERLLQEGE-PPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALK  207 (346)
T ss_dssp             SSHHHHHHHHHTT---GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHH
T ss_pred             CCHHHHHHHHhcCC-CCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHH
Confidence            99999999999875 678999988753 22111000000000 0111111333444444433222   22234444   4


Q ss_pred             HHHhCCCceEEEEeC--CccHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHH-HHHhcCCcEE
Q 016648          203 VMDRLPEARIAFIGD--GPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL-EAMSSGIPVV  278 (385)
Q Consensus       203 a~~~~~~~~l~i~G~--g~~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~-Ea~a~G~PvI  278 (385)
                      ++.+.+++.+++...  ......+.+.+.. .++++...+++.++..+++.|+++|.-|     | .+. ||.++|+|+|
T Consensus       208 ~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v  281 (346)
T PF02350_consen  208 ALAERQNVPVIFPLHNNPRGSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGKPVV  281 (346)
T ss_dssp             HHHHHTTEEEEEE--S-HHHHHHHHHHHTT-TTEEEE----HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT--EE
T ss_pred             HHHhcCCCcEEEEecCCchHHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCCeEE
Confidence            444446788888775  3334445444443 3899999999999999999999999544     4 566 9999999999


Q ss_pred             Ee-cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          279 GV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       279 ~s-~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      .- +.+.-++..   ..+.+-+ +. .|.+++.+++.+++++.+.+..+..    ...-|.-...++++.
T Consensus       282 ~iR~~geRqe~r---~~~~nvl-v~-~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~  342 (346)
T PF02350_consen  282 NIRDSGERQEGR---ERGSNVL-VG-TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIV  342 (346)
T ss_dssp             ECSSS-S-HHHH---HTTSEEE-ET-SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHH
T ss_pred             EecCCCCCHHHH---hhcceEE-eC-CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHH
Confidence            87 445556666   5565655 65 6999999999999987444433321    112255455555554

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=3.8e-10  Score=97.82  Aligned_cols=263  Identities=16%  Similarity=0.143  Sum_probs=162.8

Q ss_pred             cccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhC--CCEEEEEecCCCcccccccccccchhHHHHHHHHHHhC
Q 016648           48 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA  125 (385)
Q Consensus        48 ~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~--~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  125 (385)
                      .....+++.+.+...+||++++-+.+.+.+......+..+  +|+|..+-   |.-+     .|..+    ....+.+.+
T Consensus        70 llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVW-----AWr~~----Ra~~i~~~~  137 (381)
T COG0763          70 LLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVW-----AWRPK----RAVKIAKYV  137 (381)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---ccee-----eechh----hHHHHHHHh
Confidence            3344556666777899999998776455444444445555  88775433   2211     11111    234577899


Q ss_pred             CeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc--cccHHHHHHH
Q 016648          126 DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRV  203 (385)
Q Consensus       126 d~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~~~l~~a  203 (385)
                      |++.+.-+...+.+.+.+.    .++.+.+++-.+. +........+.++....+.+...+..|+-..  .+....+.++
T Consensus       138 D~lLailPFE~~~y~k~g~----~~~yVGHpl~d~i-~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a  212 (381)
T COG0763         138 DHLLAILPFEPAFYDKFGL----PCTYVGHPLADEI-PLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQA  212 (381)
T ss_pred             hHeeeecCCCHHHHHhcCC----CeEEeCChhhhhc-cccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHH
Confidence            9999999999999998765    4677777653332 1222334456666666666777888886533  3456677777


Q ss_pred             HHhC----CCceEEEEeCCccHHHHHHHHcCCCe-EEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          204 MDRL----PEARIAFIGDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       204 ~~~~----~~~~l~i~G~g~~~~~l~~~~~~~~i-~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      ++++    |+.++++--.....+.+.....+.+. ...-.+...+-.+.+..||+.+..|     |+..+|++.+|+|.|
T Consensus       213 ~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~V  287 (381)
T COG0763         213 AQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMV  287 (381)
T ss_pred             HHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEE
Confidence            7655    78999997766554444444332222 1222334467788999999998776     999999999999999


Q ss_pred             Eec-CC----------------CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHH
Q 016648          279 GVR-AG----------------GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE  333 (385)
Q Consensus       279 ~s~-~~----------------~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~  333 (385)
                      ++- ..                +.+.++-. +.-..-++-+.-.++.+++++..++.|...++++.+...+.
T Consensus       288 v~Yk~~~it~~iak~lvk~~yisLpNIi~~-~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l  358 (381)
T COG0763         288 VAYKVKPITYFIAKRLVKLPYVSLPNILAG-REIVPELIQEDCTPENLARALEELLLNGDRREALKEKFREL  358 (381)
T ss_pred             EEEeccHHHHHHHHHhccCCcccchHHhcC-CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence            752 11                12222200 00000011123378999999999999986666665555444

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=1.4e-09  Score=94.56  Aligned_cols=275  Identities=19%  Similarity=0.196  Sum_probs=174.1

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      -.....+.+++.+.+||+|.+|+-....+++.+++...++|+.-.--+......  .      -.-....+..-.-+|.-
T Consensus        78 ~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~--~------~PEE~NR~l~~~~S~~h  149 (383)
T COG0381          78 GNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDL--Y------FPEEINRRLTSHLSDLH  149 (383)
T ss_pred             HHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCC--C------CcHHHHHHHHHHhhhhh
Confidence            345667889999999999999998777787788889999998643222211000  0      01111234455678999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCC---CCCChhhHhhhcCCCCCCcEEE-EEeecc-ccccHHHHHHH
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSEMRWRLSNGEPDKPLIV-HVGRLG-VEKSLDFLKRV  203 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~-~~G~~~-~~k~~~~l~~a  203 (385)
                      +++++..++.+.+.+. ++++|.++.|.+-......   ..........+ ....++.+++ ..=|-. ..+++..+.++
T Consensus       150 fapte~ar~nLl~EG~-~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~-~~~~~~~~iLvT~HRreN~~~~~~~i~~a  227 (383)
T COG0381         150 FAPTEIARKNLLREGV-PEKRIFVTGNTVIDALLNTRDRVLEDSKILAKG-LDDKDKKYILVTAHRRENVGEPLEEICEA  227 (383)
T ss_pred             cCChHHHHHHHHHcCC-CccceEEeCChHHHHHHHHHhhhccchhhHHhh-hccccCcEEEEEcchhhcccccHHHHHHH
Confidence            9999999999999875 6778999998752211111   11111111111 1233333444 333332 22667666665


Q ss_pred             HHh----CCCceEEEEeC-CccHHHH--HHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          204 MDR----LPEARIAFIGD-GPYREEL--EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       204 ~~~----~~~~~l~i~G~-g~~~~~l--~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      +.+    .+++.++.--. .+...++  ..+....++.++.++...++..+++.|.+++.-|     |.-.=||-..|+|
T Consensus       228 l~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P  302 (383)
T COG0381         228 LREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP  302 (383)
T ss_pred             HHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc
Confidence            544    45666555332 2212222  2222334799999999999999999998888555     6677899999999


Q ss_pred             EEEecC-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          277 VVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       277 vI~s~~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      |++-.. ..-+|.+   +.| .-.++.. +.+.+.+++..++++++.+++|+...-.    |.-.+..+++.
T Consensus       303 vl~lR~~TERPE~v---~ag-t~~lvg~-~~~~i~~~~~~ll~~~~~~~~m~~~~np----Ygdg~as~rIv  365 (383)
T COG0381         303 VLVLRDTTERPEGV---EAG-TNILVGT-DEENILDAATELLEDEEFYERMSNAKNP----YGDGNASERIV  365 (383)
T ss_pred             EEeeccCCCCccce---ecC-ceEEeCc-cHHHHHHHHHHHhhChHHHHHHhcccCC----CcCcchHHHHH
Confidence            998754 4556665   333 4445544 7799999999999999988887664433    44444455554

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.26  E-value=8.8e-10  Score=102.10  Aligned_cols=261  Identities=12%  Similarity=0.084  Sum_probs=160.2

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCC--CEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCV--PIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~--p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      ....+++.+.+++.+||++++-+.+.+.+.....+|..|+  |+++.+-   |.-.     .|...    ..+.+.+.+|
T Consensus       296 ~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---PqVW-----AWR~~----Rikki~k~vD  363 (608)
T PRK01021        296 WYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---PSIW-----AWRPK----RKTILEKYLD  363 (608)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---ccce-----eeCcc----hHHHHHHHhh
Confidence            3345667778888999999997764555444455566785  8876443   2211     11111    3456778899


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc--cccHHHHHHHH
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVM  204 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~~~l~~a~  204 (385)
                      .+++.-+...+.+++.+.    ++..+.|++-.. ........+.+.+....++++.+.+..|+-..  .+.+..+++++
T Consensus       364 ~ll~IfPFE~~~y~~~gv----~v~yVGHPL~d~-i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa  438 (608)
T PRK01021        364 LLLLILPFEQNLFKDSPL----RTVYLGHPLVET-ISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAF  438 (608)
T ss_pred             hheecCccCHHHHHhcCC----CeEEECCcHHhh-cccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
Confidence            999999999999998654    677777776322 22222233344444443344556677885532  35678889998


Q ss_pred             H--hC-CCceEEEEeCCc-cHHHHHHHHcCCC---eEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          205 D--RL-PEARIAFIGDGP-YREELEKMFTGMP---AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       205 ~--~~-~~~~l~i~G~g~-~~~~l~~~~~~~~---i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      +  .+ ++.++++....+ ..+.+++...+.+   +.+..   .++-.++|+.||+.+..|     |++.+|++.+|+|.
T Consensus       439 ~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~---~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~Pm  510 (608)
T PRK01021        439 LASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVP---SQFRYELMRECDCALAKC-----GTIVLETALNQTPT  510 (608)
T ss_pred             HHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEec---CcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCE
Confidence            8  65 567776654332 3455666554322   23221   123468999999999877     99999999999999


Q ss_pred             EEe-cCC------------------CCCcccccCCCCCeeEe--eCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh
Q 016648          278 VGV-RAG------------------GIPDIIPEDQDGKIGYL--FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  336 (385)
Q Consensus       278 I~s-~~~------------------~~~e~~~~~~~~~~g~~--~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~  336 (385)
                      |+. ..+                  +++.++.+ ++-..-++  -+..+++.+++++ ++++|++.++++.+...+..++
T Consensus       511 VV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~  588 (608)
T PRK01021        511 IVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQA  588 (608)
T ss_pred             EEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHH
Confidence            863 221                  11111100 00001122  1344899999996 8888888777776666555444

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.23  E-value=1.6e-11  Score=99.36  Aligned_cols=114  Identities=22%  Similarity=0.248  Sum_probs=70.6

Q ss_pred             ccccccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCc-ccccccccccchhHHHHHHHHHH
Q 016648           45 VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV-YIPRYTFSWLVKPMWLVIKFLHR  123 (385)
Q Consensus        45 ~~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  123 (385)
                      ....+.....+.+.+++.+||+||+|.+......... .+  ++|++++.|+.... ..................+...+
T Consensus        62 ~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~-~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (177)
T PF13439_consen   62 FLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLA-CR--KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYK  138 (177)
T ss_dssp             --HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHH-HH--CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHC
T ss_pred             cchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHh-cc--CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHh
Confidence            3344555678999999999999999987444333222 22  99999999996631 11111112222223334556688


Q ss_pred             hCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCC
Q 016648          124 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF  162 (385)
Q Consensus       124 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~  162 (385)
                      .+|.++++|+.+++.+.+ ++.++.++.+||||+|.+.|
T Consensus       139 ~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  139 KADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             CSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred             cCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence            999999999999999999 66788999999999999876

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.21  E-value=1.9e-09  Score=92.91  Aligned_cols=277  Identities=16%  Similarity=0.146  Sum_probs=181.0

Q ss_pred             HHHHHhhccCCCEEEeCCCc-----hhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           54 RIISEVARFKPDIIHASSPG-----IMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        54 ~l~~~i~~~~pDiI~~~~~~-----~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      .....++.++||+|+.-...     ......+..++..++|++++.-+.. .........    ....+.+..+...|.|
T Consensus        68 ~~~~~i~~fk~d~iv~~~~~~~~~~~~~~~~~a~l~~~~l~~~~w~te~p-~~~~~~~~~----~~~~~~~~~l~~fd~v  142 (373)
T COG4641          68 ESLLYIREFKPDIIVNMSGDDQPDEESTIDLWAWLKRKCLPVIVWYTEDP-YDTDIFSQV----AEEQLARRPLFIFDNV  142 (373)
T ss_pred             HHHHHHHhcCCcEEEEecccccccceehHHHHHHhhcCCcceEEEEeccc-hhhhhhhhh----hHHHhhccccchhhhh
Confidence            45567788999999986432     2223333445667788777665542 211111100    0000111122334456


Q ss_pred             EEcChhH-HHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh-
Q 016648          129 LVPSVAI-GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR-  206 (385)
Q Consensus       129 i~~s~~~-~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~-  206 (385)
                      ++.++.. ++.+.+.++  ..++..+++++|.+.+.+.+..          ..-.-.+.++|+..+. ..+.+-+++.. 
T Consensus       143 ~~~g~~l~~~~yyq~~~--~~~~~~~~~a~d~~~~~~i~~d----------a~~~~dL~~ign~~pD-r~e~~ke~~~~p  209 (373)
T COG4641         143 LSFGGGLVANKYYQEGG--ARNCYYLPWAVDDSLFHPIPPD----------ASYDVDLNLIGNPYPD-RVEEIKEFFVEP  209 (373)
T ss_pred             hhccchHHHHHHHHhhc--ccceeccCccCCchhcccCCcc----------ccceeeeEEecCCCcc-HHHHHHHHhhcc
Confidence            6666666 566654443  4578889999999888776431          1123368899987665 23333333322 


Q ss_pred             ---C-CCceEEEEeCCccHHHHHHHHcCCCeEEecccCh-HHHHHHHHhCcEEEEcCC---CCC---CcHHHHHHHhcCC
Q 016648          207 ---L-PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSE---SET---LGLVVLEAMSSGI  275 (385)
Q Consensus       207 ---~-~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~-~~~~~~~~~adi~v~ps~---~e~---~~~~~~Ea~a~G~  275 (385)
                         + -+-++...|.+ +...+....-..++...|+++. ..++..++..|+.+.-++   .++   .++.+.|+++||.
T Consensus       210 s~kl~v~rr~~~~g~~-y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~  288 (373)
T COG4641         210 SFKLMVDRRFYVLGPR-YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGG  288 (373)
T ss_pred             chhhhccceeeecCCc-cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCC
Confidence               1 12445555644 2222222222347788888888 889999999999887654   222   3789999999999


Q ss_pred             cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 016648          276 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       276 PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~  354 (385)
                      |.+++...++..++   .+|+.-+++.  |..++.+.+..++..+++++++++.+.+.+ ..|+.+..+.++++ ...++
T Consensus       289 ~liT~~~~~~e~~f---~pgk~~iv~~--d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~-~i~sI  362 (373)
T COG4641         289 FLITDYWKDLEKFF---KPGKDIIVYQ--DSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLN-EIASI  362 (373)
T ss_pred             ccccccHHHHHHhc---CCchheEEec--CHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHH-HHHHH
Confidence            99999999999999   7787777765  999999999999999999999999999997 56999998888874 44444


Q ss_pred             H
Q 016648          355 I  355 (385)
Q Consensus       355 ~  355 (385)
                      .
T Consensus       363 ~  363 (373)
T COG4641         363 N  363 (373)
T ss_pred             H
Confidence            3

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.19  E-value=7.6e-11  Score=93.63  Aligned_cols=114  Identities=23%  Similarity=0.275  Sum_probs=69.3

Q ss_pred             cCCCCcccccccccchHHHHHHh--hccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhH
Q 016648           37 FPCPWYQKVPLSLALSPRIISEV--ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPM  114 (385)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~l~~~i--~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~  114 (385)
                      ++.+..............+.+.+  ++.+||+||+|++. ..+.+..+++..++|+|+++|+......    ..+....+
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~~~~  119 (160)
T PF13579_consen   45 LPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAHSPT-AGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKRRLY  119 (160)
T ss_dssp             E--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEEHHH-HHHHHHHHHHHHT--EEEE-SS-T----------HHHHHH
T ss_pred             ccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEecccc-hhHHHHHHHHccCCcEEEEECCCchhhc----cchhhHHH
Confidence            33343333344555677888888  89999999999953 4444455555789999999998542211    23444455


Q ss_pred             HHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCC
Q 016648          115 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG  156 (385)
Q Consensus       115 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~  156 (385)
                      ..+++..++.||.++++|+.+++.+.+.+ .+.+++.+||||
T Consensus       120 ~~~~~~~~~~ad~vi~~S~~~~~~l~~~g-~~~~ri~vipnG  160 (160)
T PF13579_consen  120 RWLERRLLRRADRVIVVSEAMRRYLRRYG-VPPDRIHVIPNG  160 (160)
T ss_dssp             HHHHHHHHHH-SEEEESSHHHHHHHHHH----GGGEEE----
T ss_pred             HHHHHHHHhcCCEEEECCHHHHHHHHHhC-CCCCcEEEeCcC
Confidence            67789999999999999999999999954 588999999997

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.13  E-value=3.1e-09  Score=94.71  Aligned_cols=226  Identities=15%  Similarity=0.135  Sum_probs=127.8

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHH----HHhCCe
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL----HRAADL  127 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ad~  127 (385)
                      .+++.+.+++++||+|++.....    ....++..|+|++...|........ ............+.+..    +..++.
T Consensus        83 ~~~~~~~l~~~~pDlVIsD~~~~----~~~aa~~~giP~i~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (318)
T PF13528_consen   83 IRREIRWLREFRPDLVISDFYPL----AALAARRAGIPVIVISNQYWFLHPN-FWLPWDQDFGRLIERYIDRYHFPPADR  157 (318)
T ss_pred             HHHHHHHHHhcCCCEEEEcChHH----HHHHHHhcCCCEEEEEehHHccccc-CCcchhhhHHHHHHHhhhhccCCcccc
Confidence            34566778889999999986533    2346688999998776664322111 01111111111111111    222333


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      .+..+.... .      .+..+..+++..+.......            ...+.+.+++++|..+..    .++++++.+
T Consensus       158 ~l~~~~~~~-~------~~~~~~~~~~p~~~~~~~~~------------~~~~~~~iLv~~gg~~~~----~~~~~l~~~  214 (318)
T PF13528_consen  158 RLALSFYPP-L------PPFFRVPFVGPIIRPEIREL------------PPEDEPKILVYFGGGGPG----DLIEALKAL  214 (318)
T ss_pred             eecCCcccc-c------cccccccccCchhccccccc------------CCCCCCEEEEEeCCCcHH----HHHHHHHhC
Confidence            333322200 0      00111222221111111100            012356689999987666    778899999


Q ss_pred             CCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCc
Q 016648          208 PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  287 (385)
Q Consensus       208 ~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e  287 (385)
                      ++..++++|.+...      ....|+.+.++.. +++.++|+.||++|.-    +.-+++.|++++|+|+|+-...+..|
T Consensus       215 ~~~~~~v~g~~~~~------~~~~ni~~~~~~~-~~~~~~m~~ad~vIs~----~G~~t~~Ea~~~g~P~l~ip~~~~~E  283 (318)
T PF13528_consen  215 PDYQFIVFGPNAAD------PRPGNIHVRPFST-PDFAELMAAADLVISK----GGYTTISEALALGKPALVIPRPGQDE  283 (318)
T ss_pred             CCCeEEEEcCCccc------ccCCCEEEeecCh-HHHHHHHHhCCEEEEC----CCHHHHHHHHHcCCCEEEEeCCCCch
Confidence            99999999866311      1155888887642 7899999999999944    33566999999999999887755333


Q ss_pred             ccc---cCCCCCeeEeeC--CCCHHHHHHHHhHh
Q 016648          288 IIP---EDQDGKIGYLFN--PGDLDDCLSKLEPL  316 (385)
Q Consensus       288 ~~~---~~~~~~~g~~~~--~~~~~~l~~~i~~l  316 (385)
                      ...   ..++.+.|...+  .-+++.+.+.|+++
T Consensus       284 Q~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  284 QEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             HHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence            210   003344555544  33678888877654

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.06  E-value=5e-08  Score=89.97  Aligned_cols=149  Identities=16%  Similarity=0.096  Sum_probs=95.5

Q ss_pred             CCCcEEEEEeeccc---cccHHHHHHHHHhCCCceE-EEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEE
Q 016648          180 PDKPLIVHVGRLGV---EKSLDFLKRVMDRLPEARI-AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       180 ~~~~~i~~~G~~~~---~k~~~~l~~a~~~~~~~~l-~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      .++.+++..|+...   .+....++++++.. +.++ +.+|......    .....|+.+.++++..   .+|..||++|
T Consensus       238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-~~~~i~~~g~~~~~~----~~~~~~v~~~~~~p~~---~ll~~~d~~I  309 (401)
T cd03784         238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-GQRAILSLGWGGLGA----EDLPDNVRVVDFVPHD---WLLPRCAAVV  309 (401)
T ss_pred             CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-CCeEEEEccCccccc----cCCCCceEEeCCCCHH---HHhhhhheee
Confidence            34567778888743   34566777888776 4454 4456443221    1223589999998655   4588899999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  329 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~  329 (385)
                          ..|..+++.||+++|+|+|+....+    ..+.+   .....|...+..  +.+++.+++.++++++ .+++..+.
T Consensus       310 ----~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~---~~~G~g~~l~~~~~~~~~l~~al~~~l~~~-~~~~~~~~  381 (401)
T cd03784         310 ----HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV---AELGAGPALDPRELTAERLAAALRRLLDPP-SRRRAAAL  381 (401)
T ss_pred             ----ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH---HHCCCCCCCCcccCCHHHHHHHHHHHhCHH-HHHHHHHH
Confidence                4555789999999999999886553    23334   344566665544  7899999999999853 34444444


Q ss_pred             HHHHHHhCCHHHHHH
Q 016648          330 ARQEMEKYDWRAATR  344 (385)
Q Consensus       330 a~~~~~~~s~~~~~~  344 (385)
                      +++..+.-..+..++
T Consensus       382 ~~~~~~~~g~~~~~~  396 (401)
T cd03784         382 LRRIREEDGVPSAAD  396 (401)
T ss_pred             HHHHHhccCHHHHHH
Confidence            433322334444443

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.06  E-value=2.1e-08  Score=89.29  Aligned_cols=229  Identities=13%  Similarity=0.172  Sum_probs=123.9

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...+..+++++.+||+|++.....    +...++..++|++...|.....+ +.. ........+.....+...++.++.
T Consensus        81 ~~~~~~~~l~~~~pDlVi~d~~~~----~~~aA~~~~iP~i~i~~q~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~  154 (321)
T TIGR00661        81 AIRREINIIREYNPDLIISDFEYS----TVVAAKLLKIPVICISNQNYTRY-PLK-TDLIVYPTMAALRIFNERCERFIV  154 (321)
T ss_pred             HHHHHHHHHHhcCCCEEEECCchH----HHHHHHhcCCCEEEEecchhhcC-Ccc-cchhHHHHHHHHHHhccccceEee
Confidence            344567888999999999996432    24467889999996656432211 111 011111111222333334444443


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCc
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEA  210 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~  210 (385)
                      .+.....     .+.        |..+.  ... .........+. ...++..++++.|.    .+...+++++++.+++
T Consensus       155 ~~~~~~~-----~~~--------p~~~~--~~~-~~~~~~~~~~~-~~~~~~~iLv~~g~----~~~~~l~~~l~~~~~~  213 (321)
T TIGR00661       155 PDYPFPY-----TIC--------PKIIK--NME-GPLIRYDVDDV-DNYGEDYILVYIGF----EYRYKILELLGKIANV  213 (321)
T ss_pred             ecCCCCC-----CCC--------ccccc--cCC-Ccccchhhhcc-ccCCCCcEEEECCc----CCHHHHHHHHHhCCCe
Confidence            3211000     000        10000  000 00000000001 11223445666554    3456778888888876


Q ss_pred             eEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCc---
Q 016648          211 RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD---  287 (385)
Q Consensus       211 ~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e---  287 (385)
                      .+++.+.....   ..+  ..++.+.++.+ +++.++|..||++|.-+    ...++.||+++|+|+|..+..+..|   
T Consensus       214 ~~i~~~~~~~~---~~~--~~~v~~~~~~~-~~~~~~l~~ad~vI~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~  283 (321)
T TIGR00661       214 KFVCYSYEVAK---NSY--NENVEIRRITT-DNFKELIKNAELVITHG----GFSLISEALSLGKPLIVIPDLGQFEQGN  283 (321)
T ss_pred             EEEEeCCCCCc---ccc--CCCEEEEECCh-HHHHHHHHhCCEEEECC----ChHHHHHHHHcCCCEEEEcCCCcccHHH
Confidence            65443322111   111  34788888876 78999999999999654    3467999999999999988765333   


Q ss_pred             ---ccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCH
Q 016648          288 ---IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       288 ---~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~  320 (385)
                         .+   .+.+.|...+..+. ++.+++...++|+
T Consensus       284 na~~l---~~~g~~~~l~~~~~-~~~~~~~~~~~~~  315 (321)
T TIGR00661       284 NAVKL---EDLGCGIALEYKEL-RLLEAILDIRNMK  315 (321)
T ss_pred             HHHHH---HHCCCEEEcChhhH-HHHHHHHhccccc
Confidence               24   45566777776666 5555665555544

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.05  E-value=1.1e-07  Score=87.35  Aligned_cols=155  Identities=15%  Similarity=0.148  Sum_probs=98.1

Q ss_pred             CCcEEEEEeeccccc--cHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcC
Q 016648          181 DKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k--~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      ...+++..|+.....  -++.+++++...+...++..|.+...+.+...  ..++.+.+++++.   +++..||++|..+
T Consensus       225 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~--~~~v~~~~~~p~~---~ll~~~~~~I~hg  299 (392)
T TIGR01426       225 RPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGEL--PPNVEVRQWVPQL---EILKKADAFITHG  299 (392)
T ss_pred             CCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccC--CCCeEEeCCCCHH---HHHhhCCEEEECC
Confidence            345677788863332  34556667666543334456655443333322  3479999999764   5689999999543


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEecCCCC----CcccccCCCCCeeEeeCC--CCHHHHHHHHhHhhcCHHHHHHHHHHHHH
Q 016648          259 ESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQ  332 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~PvI~s~~~~~----~e~~~~~~~~~~g~~~~~--~~~~~l~~~i~~ll~~~~~~~~~~~~a~~  332 (385)
                          ...++.||+++|+|+|+....+-    .+.+   .....|.....  -+.++++++|.++++|++.++.+.+-+..
T Consensus       300 ----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l---~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~  372 (392)
T TIGR01426       300 ----GMNSTMEALFNGVPMVAVPQGADQPMTARRI---AELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAE  372 (392)
T ss_pred             ----CchHHHHHHHhCCCEEecCCcccHHHHHHHH---HHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence                35689999999999998654432    2233   33445655543  36899999999999998765555444433


Q ss_pred             HHHhCCHHHHHHHHH
Q 016648          333 EMEKYDWRAATRTIR  347 (385)
Q Consensus       333 ~~~~~s~~~~~~~~~  347 (385)
                      ....-..+..++.+.
T Consensus       373 ~~~~~~~~~aa~~i~  387 (392)
T TIGR01426       373 IREAGGARRAADEIE  387 (392)
T ss_pred             HHHcCCHHHHHHHHH
Confidence            334456666665554

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.04  E-value=2.5e-08  Score=86.50  Aligned_cols=196  Identities=15%  Similarity=0.129  Sum_probs=117.3

Q ss_pred             HHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcC
Q 016648           53 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  132 (385)
Q Consensus        53 ~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s  132 (385)
                      ..+.+.+++.+||+|++.++....-. ....+..+.+ ++.+.|.....                     ..+|.++..+
T Consensus        70 ~~~~~~l~~~~~d~vV~D~y~~~~~~-~~~~k~~~~~-l~~iDD~~~~~---------------------~~~D~vin~~  126 (279)
T TIGR03590        70 LELINLLEEEKFDILIVDHYGLDADW-EKLIKEFGRK-ILVIDDLADRP---------------------HDCDLLLDQN  126 (279)
T ss_pred             HHHHHHHHhcCCCEEEEcCCCCCHHH-HHHHHHhCCe-EEEEecCCCCC---------------------cCCCEEEeCC
Confidence            35888899999999999886433321 1122333444 44445532110                     1589898887


Q ss_pred             hhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-CCce
Q 016648          133 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-PEAR  211 (385)
Q Consensus       133 ~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-~~~~  211 (385)
                      .. .+...-....++....+.  |.+--...+.....  ..+.....+.+.+++++|..+..+....+++++.+. ++.+
T Consensus       127 ~~-~~~~~y~~~~~~~~~~l~--G~~Y~~lr~eF~~~--~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~  201 (279)
T TIGR03590       127 LG-ADASDYQGLVPANCRLLL--GPSYALLREEFYQL--ATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINIS  201 (279)
T ss_pred             CC-cCHhHhcccCcCCCeEEe--cchHHhhhHHHHHh--hHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCce
Confidence            65 333221111233333333  33211111111000  000000112345788999888877677888888776 3455


Q ss_pred             EE-EEeCC-ccHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          212 IA-FIGDG-PYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       212 l~-i~G~g-~~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      +. ++|.+ +..+++++.... .++++.+++  +++.++|+.||++|..     .|.++.|++++|+|+|+....
T Consensus       202 i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~--~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~  269 (279)
T TIGR03590       202 ITLVTGSSNPNLDELKKFAKEYPNIILFIDV--ENMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICLA  269 (279)
T ss_pred             EEEEECCCCcCHHHHHHHHHhCCCEEEEeCH--HHHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence            44 56654 455666666543 479999998  8999999999999974     368999999999999976553

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.96  E-value=6.3e-07  Score=76.98  Aligned_cols=223  Identities=10%  Similarity=0.060  Sum_probs=134.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchh-HHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...+.+..+..+.+-+++|+-... .+.+++..+....++.+.+.+-.  .. ....++..+.+..+.+...++...|++
T Consensus        67 a~avi~~a~~~r~~kff~HGqFn~~lwlaLl~g~~~~~k~~WhIWGaD--LY-e~~~~~k~rlfy~lRr~aq~rvg~V~a  143 (360)
T PF07429_consen   67 AQAVIAKAKADRADKFFLHGQFNPWLWLALLFGKIKLKKCYWHIWGAD--LY-EDSRSLKFRLFYFLRRLAQKRVGHVFA  143 (360)
T ss_pred             HHHHHHHHhhCccceEEEeccCcHHHHHHHHcCCccccceEEEEeCch--hh-ccccccchhHHHHHHHHHHhhcCeEEE
Confidence            444555556678899999986333 33333333444455666555522  11 122344455556677888888888876


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeec-cccccHHHHHHHHHhC--
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL--  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~k~~~~l~~a~~~~--  207 (385)
                       .+.....+++.++..+......|.-++........          ....+...-+.+|+- ++.-+...+++++++.  
T Consensus       144 -t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~----------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~  212 (360)
T PF07429_consen  144 -TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEK----------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG  212 (360)
T ss_pred             -EcchHHHHHHHcCCCCceEEEcCCCCchhhhcccc----------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC
Confidence             56667777777653333444444434433211110          012233445555654 5666677777777765  


Q ss_pred             CCceEEE-EeCC----ccHHHHHHHHcC----CCeE-EecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHHhcCCc
Q 016648          208 PEARIAF-IGDG----PYREELEKMFTG----MPAV-FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIP  276 (385)
Q Consensus       208 ~~~~l~i-~G~g----~~~~~l~~~~~~----~~i~-~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~P  276 (385)
                      .++++++ .|-|    .+.+++.+...+    .++. +..+++.+|..++++.||++++... ..|.|+..+ .+.+|+|
T Consensus       213 ~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G~~  291 (360)
T PF07429_consen  213 DDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLGKK  291 (360)
T ss_pred             CCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcCCe
Confidence            4677766 3433    244455555443    2565 4679999999999999999999865 567776655 9999999


Q ss_pred             EEEecCCCCCccc
Q 016648          277 VVGVRAGGIPDII  289 (385)
Q Consensus       277 vI~s~~~~~~e~~  289 (385)
                      |+.+.....-..+
T Consensus       292 v~L~~~np~~~~l  304 (360)
T PF07429_consen  292 VFLSRDNPFWQDL  304 (360)
T ss_pred             EEEecCChHHHHH
Confidence            9988665554444

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.90  E-value=3.6e-07  Score=77.34  Aligned_cols=273  Identities=12%  Similarity=0.078  Sum_probs=156.7

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchh-HHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      +.+.+....+..+.+-+++|+-... .+.+++.-+..-.++.+.+.+  .+.. .....+..+.+..+.+...++..+|+
T Consensus        27 la~avi~~a~~~r~~rff~HGqFn~~lwlall~g~~~~~q~yWhiWG--aDLY-e~~~~lk~rlfy~lRR~aq~rvg~v~  103 (322)
T PRK02797         27 LAEAVIAKAKANRAQRFFLHGQFNPTLWLALLSGKIKPKQFYWHIWG--ADLY-EESKGLKFRLFYPLRRLAQKRVGHVF  103 (322)
T ss_pred             HHHHHHHHHhhCccceEEEecCCCHHHHHHHHhCCcCccceEEEEEC--hhhh-hcccchhHHHHHHHHHHHHhhcCeEE
Confidence            4556666666688899999986332 233333323333345554444  2222 22245556666777888999999999


Q ss_pred             EcChhHHHH-HHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeec-cccccHHHHHHHHHhC
Q 016648          130 VPSVAIGKD-LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL  207 (385)
Q Consensus       130 ~~s~~~~~~-~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~k~~~~l~~a~~~~  207 (385)
                      + ....... .++.+.++ .+....|.-+++.......         . ..++....+.+|+- ++..+...+++++++.
T Consensus       104 a-trGD~~~~a~~~~~v~-~~llyfpt~m~~~l~~~~~---------~-~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~  171 (322)
T PRK02797        104 A-TRGDLSYFAQRHPKVP-GSLLYFPTRMDPSLNTMAN---------D-RQRAGKMTILVGNSGDRSNRHIEALRALHQQ  171 (322)
T ss_pred             E-ecchHHHHHHhcCCCC-ccEEecCCcchhhhccccc---------c-ccCCCceEEEEeCCCCCcccHHHHHHHHHHH
Confidence            9 5555555 45554443 3443333322221111110         0 11223455556654 6666777888888766


Q ss_pred             --CCceEEE-Ee----CCccHHHHHHHHcC----CC-eEEecccChHHHHHHHHhCcEEEEcC-CCCCCcHHHHHHHhcC
Q 016648          208 --PEARIAF-IG----DGPYREELEKMFTG----MP-AVFTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSG  274 (385)
Q Consensus       208 --~~~~l~i-~G----~g~~~~~l~~~~~~----~~-i~~~g~~~~~~~~~~~~~adi~v~ps-~~e~~~~~~~Ea~a~G  274 (385)
                        .++++++ .|    +..+.+++.+...+    .+ ..+..+++.+|...+++.||+.++.- +..|.|+..+ .+.+|
T Consensus       172 ~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l-Li~~G  250 (322)
T PRK02797        172 FGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL-LIQLG  250 (322)
T ss_pred             hCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH-HHHCC
Confidence              4667766 33    22344555555443    24 34678899999999999999998875 4678887665 99999


Q ss_pred             CcEEEe-cCCCCCcccccCCCCCeeEeeCCCCH--HHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 016648          275 IPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDL--DDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  351 (385)
Q Consensus       275 ~PvI~s-~~~~~~e~~~~~~~~~~g~~~~~~~~--~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy  351 (385)
                      +||+.+ +.+...++.   +.+..- +++.++.  ..+.+          ..+.+....++.+. |+.++..+.+. .++
T Consensus       251 ~~v~l~r~n~fwqdl~---e~gv~V-lf~~d~L~~~~v~e----------~~rql~~~dk~~I~-Ff~pn~~~~W~-~~l  314 (322)
T PRK02797        251 KPVVLSRDNPFWQDLT---EQGLPV-LFTGDDLDEDIVRE----------AQRQLASVDKNIIA-FFSPNYLQGWR-NAL  314 (322)
T ss_pred             CcEEEecCCchHHHHH---hCCCeE-EecCCcccHHHHHH----------HHHHHHhhCcceee-ecCHhHHHHHH-HHH
Confidence            999877 455666655   444433 3443332  11111          12223333333333 88888888886 566


Q ss_pred             HHHH
Q 016648          352 NAAI  355 (385)
Q Consensus       352 ~~~~  355 (385)
                      +.+.
T Consensus       315 ~~~~  318 (322)
T PRK02797        315 AIAA  318 (322)
T ss_pred             HHhh
Confidence            6553

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=98.84  E-value=1.9e-07  Score=84.89  Aligned_cols=172  Identities=16%  Similarity=0.230  Sum_probs=108.7

Q ss_pred             CCCCcEEEEEeecccc--ccHHHHHHHHHhCCCceEEEEeCCc-cHHHHHHHHcCC-----CeEEecccChHHHHHHHHh
Q 016648          179 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFTGM-----PAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l~i~G~g~-~~~~l~~~~~~~-----~i~~~g~~~~~~~~~~~~~  250 (385)
                      +++.++++.+.++.+.  .-++...+++++.|+.++.+...+. ..+.+.+...+.     ++.|.+..+.++....++.
T Consensus       282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~  361 (468)
T PF13844_consen  282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQL  361 (468)
T ss_dssp             -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG
T ss_pred             CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhh
Confidence            4566777777776543  3366677788888999998876443 234444444322     5899999988999999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC---CCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHH
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~---~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      +|+++=+.. -+.+++.+||+.+|+|||+-....+..-+...   .-|...++..  |.++.++...++.+|++.++.++
T Consensus       362 ~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s~~eYv~~Av~La~D~~~l~~lR  438 (468)
T PF13844_consen  362 ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--SEEEYVEIAVRLATDPERLRALR  438 (468)
T ss_dssp             -SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--SHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--CHHHHHHHHHHHhCCHHHHHHHH
Confidence            999997643 34578999999999999986543332211000   0122334443  89999999999999999999999


Q ss_pred             HHHHHHH-Hh--CCHHHHHHHHHHHHHHHH
Q 016648          328 QAARQEM-EK--YDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       328 ~~a~~~~-~~--~s~~~~~~~~~~~iy~~~  354 (385)
                      ++-++.. +.  |+....++.+. +.|+++
T Consensus       439 ~~Lr~~~~~SpLfd~~~~ar~lE-~a~~~m  467 (468)
T PF13844_consen  439 AKLRDRRSKSPLFDPKRFARNLE-AAYRQM  467 (468)
T ss_dssp             HHHHHHHHHSGGG-HHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHhhCCCCCHHHHHHHHH-HHHHHh
Confidence            9988775 32  99999999995 688764

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=98.82  E-value=4.4e-07  Score=79.79  Aligned_cols=228  Identities=18%  Similarity=0.205  Sum_probs=134.1

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...++.+.+++++||++++++...    +...+...|+|.|....+.....               ..+..+..||.+++
T Consensus        71 R~~~l~~~~~~~~pDv~is~~s~~----a~~va~~lgiP~I~f~D~e~a~~---------------~~~Lt~Pla~~i~~  131 (335)
T PF04007_consen   71 RQYKLLKLIKKFKPDVAISFGSPE----AARVAFGLGIPSIVFNDTEHAIA---------------QNRLTLPLADVIIT  131 (335)
T ss_pred             HHHHHHHHHHhhCCCEEEecCcHH----HHHHHHHhCCCeEEEecCchhhc---------------cceeehhcCCeeEC
Confidence            355788888999999999886422    33466788999988665532111               12345678999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCC-CCCCCChhhHhhhcCCCCCCcEEEEEeecc-----cccc-HHHHHHH
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRSSEMRWRLSNGEPDKPLIVHVGRLG-----VEKS-LDFLKRV  203 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~-----~~k~-~~~l~~a  203 (385)
                      +...-.+.+.+.+. . +++. -++|++...+ .+-........++.. .+++.+++=...+.     ..++ +..+++.
T Consensus       132 P~~~~~~~~~~~G~-~-~~i~-~y~G~~E~ayl~~F~Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~  207 (335)
T PF04007_consen  132 PEAIPKEFLKRFGA-K-NQIR-TYNGYKELAYLHPFKPDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEE  207 (335)
T ss_pred             CcccCHHHHHhcCC-c-CCEE-EECCeeeEEeecCCCCChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHH
Confidence            88776666666543 2 2332 2567665332 221222344444442 23333333222211     1112 4455555


Q ss_pred             HHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          204 MDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       204 ~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      +++..+. ++++........+   .++.++.+....  -+..+++..||++|.     +.|+...||..+|+|.|++-.+
T Consensus       208 L~~~~~~-vV~ipr~~~~~~~---~~~~~~~i~~~~--vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g  276 (335)
T PF04007_consen  208 LEKYGRN-VVIIPRYEDQREL---FEKYGVIIPPEP--VDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPG  276 (335)
T ss_pred             HHhhCce-EEEecCCcchhhH---HhccCccccCCC--CCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCC
Confidence            5555444 5666544333322   233344333322  356689999999993     3378889999999999986433


Q ss_pred             ---CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh
Q 016648          284 ---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  317 (385)
Q Consensus       284 ---~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll  317 (385)
                         ++.+++     -+.|+++...|++++.+.+.+..
T Consensus       277 ~~~~vd~~L-----~~~Gll~~~~~~~ei~~~v~~~~  308 (335)
T PF04007_consen  277 KLLAVDKYL-----IEKGLLYHSTDPDEIVEYVRKNL  308 (335)
T ss_pred             cchhHHHHH-----HHCCCeEecCCHHHHHHHHHHhh
Confidence               333444     34577888889999988666543

They are found in archaea and some bacteria and have no known function.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=98.71  E-value=8.8e-06  Score=74.20  Aligned_cols=274  Identities=13%  Similarity=0.083  Sum_probs=158.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchh-HHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ...+...|.....||.+--+..+. .....+  ...-.|+.++.-++........ ..             +--+|..+.
T Consensus       324 d~e~a~~I~~d~IdILvDl~g~T~d~r~~v~--A~RpAPiqvswlGy~aT~g~p~-~D-------------Y~I~D~y~v  387 (620)
T COG3914         324 DAEIANAIRTDGIDILVDLDGHTVDTRCQVF--AHRPAPIQVSWLGYPATTGSPN-MD-------------YFISDPYTV  387 (620)
T ss_pred             HHHHHHHHHhcCCeEEEeccCceeccchhhh--hcCCCceEEeecccccccCCCc-ce-------------EEeeCceec
Confidence            456778888889999887654222 222222  2334678776555432221010 00             112555555


Q ss_pred             cChhHHHHHHHhcccCCCcEEEee-CCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccccc--HHHHHHHHHhC
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWK-KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS--LDFLKRVMDRL  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~--~~~l~~a~~~~  207 (385)
                      + +...+++.+.-       .-+| .-...+.+.+.... ..+.+.. .+++..+++++++..+.-.  .+.-.++++..
T Consensus       388 P-p~ae~yysEkl-------~RLp~cy~p~d~~~~v~p~-~sR~~lg-lp~~avVf~c~~n~~K~~pev~~~wmqIL~~v  457 (620)
T COG3914         388 P-PTAEEYYSEKL-------WRLPQCYQPVDGFEPVTPP-PSRAQLG-LPEDAVVFCCFNNYFKITPEVFALWMQILSAV  457 (620)
T ss_pred             C-chHHHHHHHHH-------HhcccccCCCCCcccCCCC-cchhhcC-CCCCeEEEEecCCcccCCHHHHHHHHHHHHhC
Confidence            5 55556665542       2223 22222333322211 1122222 2445556666665543321  44556777778


Q ss_pred             CCceEEEEeCCccH---HHHHHHHcCC-----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 PEARIAFIGDGPYR---EELEKMFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ~~~~l~i~G~g~~~---~~l~~~~~~~-----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      |+-.|.+.|.|+..   ..++.++++.     +++|.+..++++..+-|.-||+++-+.-+ +..++.+|++.+|+||++
T Consensus       458 P~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT  536 (620)
T COG3914         458 PNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLT  536 (620)
T ss_pred             CCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceee
Confidence            99999999876543   3444554433     68999999999999999999999855433 446788999999999997


Q ss_pred             ecCCCCC-----cccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHH
Q 016648          280 VRAGGIP-----DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME---KYDWRAATRTIRNEQY  351 (385)
Q Consensus       280 s~~~~~~-----e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~---~~s~~~~~~~~~~~iy  351 (385)
                      -......     .++.  .-|..-+++.  +.++.++.--.+-+|...+++.+..-+...+   -|+.+..++++. .+|
T Consensus       537 ~~G~~FasR~~~si~~--~agi~e~vA~--s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le-~~y  611 (620)
T COG3914         537 RVGEQFASRNGASIAT--NAGIPELVAD--SRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLE-TLY  611 (620)
T ss_pred             eccHHHHHhhhHHHHH--hcCCchhhcC--CHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHH-HHH
Confidence            4311111     1110  1122333333  7777777777777777666665554444432   389999999995 799


Q ss_pred             HHHHHH
Q 016648          352 NAAIWF  357 (385)
Q Consensus       352 ~~~~~~  357 (385)
                      .+..+.
T Consensus       612 ~~M~~~  617 (620)
T COG3914         612 WGMWSE  617 (620)
T ss_pred             HHHHHh
Confidence            887654

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.68  E-value=7.3e-07  Score=81.17  Aligned_cols=270  Identities=13%  Similarity=0.075  Sum_probs=124.2

Q ss_pred             CCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc
Q 016648           64 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR  143 (385)
Q Consensus        64 pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~  143 (385)
                      .+++++.+.....   ....+..+.++|...|+. +.-.-........ .............|.+++.|+...+.+.+.+
T Consensus        79 Ak~~i~~~~~~~~---~~~~~~~~~~~i~lwHG~-~~K~~g~~~~~~~-~~~~~~~~~~~~~d~~~~~s~~~~~~~~~~f  153 (369)
T PF04464_consen   79 AKYIISDSYFPDL---IYFKKRKNQKYIQLWHGI-PLKKIGYDSPDNK-NYRKNYKRNYRNYDYFIVSSEFEKEIFKKAF  153 (369)
T ss_dssp             EEEEEESS---T-----TS---TTSEEEE--SS---SB--GGG-S----TS-HHHHHHHTT-SEEEESSHHHHHHHHHHT
T ss_pred             CcEEEECCCCCcc---cccccCCCcEEEEecCCC-cccccchhccccc-cchhhhhhhccCCcEEEECCHHHHHHHHHHh
Confidence            3677777431111   112345678888889996 3321111000000 0001344567889999999999999999988


Q ss_pred             ccCCCcEEEeeCCCCCCCCCCCCCC-hhhHhhhcCCCCCCcEEEEEeeccccccH------------HHHHHHHHhCCCc
Q 016648          144 VTAANKIRIWKKGVDSESFHPRFRS-SEMRWRLSNGEPDKPLIVHVGRLGVEKSL------------DFLKRVMDRLPEA  210 (385)
Q Consensus       144 ~~~~~~i~vi~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~~k~~------------~~l~~a~~~~~~~  210 (385)
                      +.+.+++.+...+-....+...... ........ ...++.+|+|+-++......            +.+.  ...-+++
T Consensus       154 ~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~-~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~  230 (369)
T PF04464_consen  154 GYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLG-IDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNY  230 (369)
T ss_dssp             T--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT---SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTTTE
T ss_pred             ccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhc-cCCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCCCc
Confidence            7666666655432211111111111 11222222 24456689998766443222            2222  1222567


Q ss_pred             eEEEEeCCccHHHHHH-HHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe--cCCCC--
Q 016648          211 RIAFIGDGPYREELEK-MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV--RAGGI--  285 (385)
Q Consensus       211 ~l~i~G~g~~~~~l~~-~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s--~~~~~--  285 (385)
                      .+++-........... .....++.....-  +++.+++..||++|.-     ++..++|++.+|+|||..  |....  
T Consensus       231 ~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~  303 (369)
T PF04464_consen  231 VLIIKPHPNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEK  303 (369)
T ss_dssp             EEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTT
T ss_pred             EEEEEeCchhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhh
Confidence            7666553322222222 1123356655543  5899999999999944     367899999999999954  33211  


Q ss_pred             -CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 016648          286 -PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       286 -~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~i  350 (385)
                       +.+..+..+...|-.+.  +.++|.++|..+++++...++..+...+..-.|.-.+.++++.+.|
T Consensus       304 ~rg~~~~~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I  367 (369)
T PF04464_consen  304 ERGFYFDYEEDLPGPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI  367 (369)
T ss_dssp             TSSBSS-TTTSSSS-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred             ccCCCCchHhhCCCceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence             11110002333455554  8999999999998876654443333333333344445566555443

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.62  E-value=8e-07  Score=78.81  Aligned_cols=179  Identities=12%  Similarity=0.045  Sum_probs=107.1

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHh--CCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHH
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLL--CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL  139 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~  139 (385)
                      .+||++++-+.+.+.+.....++..  |+|+++.+--   .-+     .|...    ..+.+.+.+|.+++.-+...+.+
T Consensus        75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~P---qvW-----AWr~~----R~~~i~k~~d~vl~ifPFE~~~y  142 (347)
T PRK14089         75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILP---QVW-----AWKKG----RAKILEKYCDFLASILPFEVQFY  142 (347)
T ss_pred             cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc---cce-----eeCcc----hHHHHHHHHhhhhccCCCCHHHh
Confidence            6999999876544444434444555  7998875432   211     11111    34567788999988777666655


Q ss_pred             HHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc--cccHHHHHHHHHhCCC--ceEEEE
Q 016648          140 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPE--ARIAFI  215 (385)
Q Consensus       140 ~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~--~~l~i~  215 (385)
                          +   .+..++.|++-.. .....      ..  . .+++.+.++.|+-..  .+.+..++++++++.+  ..+++.
T Consensus       143 ----g---~~~~~VGhPl~d~-~~~~~------~~--~-~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~  205 (347)
T PRK14089        143 ----Q---SKATYVGHPLLDE-IKEFK------KD--L-DKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVP  205 (347)
T ss_pred             ----C---CCCEEECCcHHHh-hhhhh------hh--c-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEe
Confidence                2   2556777765322 11110      00  1 223445566665432  2445666688877632  566676


Q ss_pred             eCCccHHHHHHHHcCC-CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe
Q 016648          216 GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       216 G~g~~~~~l~~~~~~~-~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s  280 (385)
                      |.... +.+++...+. .+.+.     ++..++|+.||+.+..|     |++.+|++.+|+|.|..
T Consensus       206 ~a~~~-~~i~~~~~~~~~~~~~-----~~~~~~m~~aDlal~~S-----GT~TLE~al~g~P~Vv~  260 (347)
T PRK14089        206 SFFKG-KDLKEIYGDISEFEIS-----YDTHKALLEAEFAFICS-----GTATLEAALIGTPFVLA  260 (347)
T ss_pred             CCCcH-HHHHHHHhcCCCcEEe-----ccHHHHHHhhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence            65433 5555544332 33333     25578999999999776     88888999999999974

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.53  E-value=4.4e-07  Score=70.18  Aligned_cols=76  Identities=28%  Similarity=0.292  Sum_probs=56.4

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhC-CCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ..++.+++++.+||+||+|.+....+.+.++++..+ +|+|++.|+..... .    ....+..+.+.+.+++++|.+++
T Consensus        63 ~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~-~----~~~~~~~~~~~~~~~k~~~~ii~  137 (139)
T PF13477_consen   63 YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN-S----SKKKKLKKFIIKFAFKRADKIIV  137 (139)
T ss_pred             HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec-C----CchHHHHHHHHHHHHHhCCEEEE
Confidence            458999999999999999998665555666677777 99999999852211 1    11111445588899999999998


Q ss_pred             cC
Q 016648          131 PS  132 (385)
Q Consensus       131 ~s  132 (385)
                      .|
T Consensus       138 ~~  139 (139)
T PF13477_consen  138 QS  139 (139)
T ss_pred             cC
Confidence            76

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.52  E-value=9.7e-06  Score=68.31  Aligned_cols=231  Identities=16%  Similarity=0.188  Sum_probs=142.7

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+++.+++||+.+.-....    +...+...|+|.++...+....               ...+..+..||.++++
T Consensus        73 ~~~L~ki~~~~kpdv~i~~~s~~----l~rvafgLg~psIi~~D~ehA~---------------~qnkl~~Pla~~ii~P  133 (346)
T COG1817          73 VYKLSKIIAEFKPDVAIGKHSPE----LPRVAFGLGIPSIIFVDNEHAE---------------AQNKLTLPLADVIITP  133 (346)
T ss_pred             HHHHHHHHhhcCCceEeecCCcc----hhhHHhhcCCceEEecCChhHH---------------HHhhcchhhhhheecc
Confidence            44688899999999998833211    2345677899988754442111               1345678899999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCC----CCCCCCCCChhhHhhhcCCCCCCcEEEEEee-----ccccccHHHHHH
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDS----ESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----LGVEKSLDFLKR  202 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-----~~~~k~~~~l~~  202 (385)
                      +....+.+...+.. +.++ +-.||+-.    ..|.|   ..+..+++....++..+++=.-.     ....++++.+.+
T Consensus       134 ~~~~~~~~~~~G~~-p~~i-~~~~giae~~~v~~f~p---d~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~  208 (346)
T COG1817         134 EAIDEEELLDFGAD-PNKI-SGYNGIAELANVYGFVP---DPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPD  208 (346)
T ss_pred             cccchHHHHHhCCC-ccce-ecccceeEEeecccCCC---CHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHH
Confidence            99888888887753 3333 33445422    12333   34445555554444444443322     244566777777


Q ss_pred             HHHhCCCceEEEEeCCccHHHHHHHHcCCCeEE-ecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          203 VMDRLPEARIAFIGDGPYREELEKMFTGMPAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       203 a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~-~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +++.+++.-.+++-.....   ++..++.++.. ....  .|-.+++-.|++++     .+.|+..-||...|+|.|+..
T Consensus       209 li~~l~k~giV~ipr~~~~---~eife~~~n~i~pk~~--vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~  278 (346)
T COG1817         209 LIKELKKYGIVLIPREKEQ---AEIFEGYRNIIIPKKA--VDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCY  278 (346)
T ss_pred             HHHHHHhCcEEEecCchhH---HHHHhhhccccCCccc--ccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEec
Confidence            7777766666666543322   23333332222 1111  34455888899988     334677889999999999886


Q ss_pred             CC---CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHH
Q 016648          282 AG---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE  321 (385)
Q Consensus       282 ~~---~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~  321 (385)
                      -|   ++.++.     -+.|.++...|+.+..+.+.+.+.++.
T Consensus       279 pGkll~vdk~l-----ie~G~~~~s~~~~~~~~~a~~~l~~~~  316 (346)
T COG1817         279 PGKLLAVDKYL-----IEKGLLYHSTDEIAIVEYAVRNLKYRR  316 (346)
T ss_pred             CCccccccHHH-----HhcCceeecCCHHHHHHHHHHHhhchh
Confidence            33   344444     456788888888888888888777654

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.44  E-value=1.5e-05  Score=72.96  Aligned_cols=152  Identities=14%  Similarity=0.160  Sum_probs=97.4

Q ss_pred             CCcEEEEEeecccc-ccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC
Q 016648          181 DKPLIVHVGRLGVE-KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE  259 (385)
Q Consensus       181 ~~~~i~~~G~~~~~-k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~  259 (385)
                      .+++.+..|+.... .=+..+++++..+ +.++++...+ ...  .......|+...+++|+.+   ++..||++|    
T Consensus       237 ~~~vyvslGt~~~~~~l~~~~~~a~~~l-~~~vi~~~~~-~~~--~~~~~p~n~~v~~~~p~~~---~l~~ad~vI----  305 (406)
T COG1819         237 RPIVYVSLGTVGNAVELLAIVLEALADL-DVRVIVSLGG-ARD--TLVNVPDNVIVADYVPQLE---LLPRADAVI----  305 (406)
T ss_pred             CCeEEEEcCCcccHHHHHHHHHHHHhcC-CcEEEEeccc-ccc--ccccCCCceEEecCCCHHH---HhhhcCEEE----
Confidence            34455666766544 1233445555554 4566665533 111  1112244899999998777   599999999    


Q ss_pred             CCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeC--CCCHHHHHHHHhHhhcCHHHHHHHHHHHHHH
Q 016648          260 SETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQAARQE  333 (385)
Q Consensus       260 ~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~--~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~  333 (385)
                      ..|..+++.||+.+|+|+|+-..+    ...+.+   ++-..|....  .-+.+.++++|+++++|+..++...+..+..
T Consensus       306 ~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv---e~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~  382 (406)
T COG1819         306 HHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV---EELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEF  382 (406)
T ss_pred             ecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH---HHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence            445678899999999999986544    233444   5556776666  5789999999999999987655544444333


Q ss_pred             HHhCCHHHHHHHH
Q 016648          334 MEKYDWRAATRTI  346 (385)
Q Consensus       334 ~~~~s~~~~~~~~  346 (385)
                      .+.-..+..++.+
T Consensus       383 ~~~~g~~~~a~~l  395 (406)
T COG1819         383 KEEDGPAKAADLL  395 (406)
T ss_pred             hhcccHHHHHHHH
Confidence            3445544444444

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.36  E-value=1.9e-05  Score=74.32  Aligned_cols=138  Identities=15%  Similarity=0.156  Sum_probs=94.3

Q ss_pred             CcEEEEEeeccc-----cccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHH--HhCcEE
Q 016648          182 KPLIVHVGRLGV-----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF  254 (385)
Q Consensus       182 ~~~i~~~G~~~~-----~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~--~~adi~  254 (385)
                      +.+++..|+...     .+-...+++++++++ .++++..++...+    .....|+.+.+++|+.++   +  ..++++
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-~~viw~~~~~~~~----~~~p~Nv~i~~w~Pq~~l---L~hp~v~~f  368 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEA----INLPANVLTQKWFPQRAV---LKHKNVKAF  368 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-CeEEEEECCCcCc----ccCCCceEEecCCCHHHH---hcCCCCCEE
Confidence            467778888642     344678889998887 4766655443221    112358999999998765   5  558888


Q ss_pred             EEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCC--CCHHHHHHHHhHhhcCHHHHHHHHH
Q 016648          255 VMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQ  328 (385)
Q Consensus       255 v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~--~~~~~l~~~i~~ll~~~~~~~~~~~  328 (385)
                      |    ..|..+++.||+.+|+|+|+-+..+    ....+   ...+.|...+.  -+.+++.++|.++++|+..++...+
T Consensus       369 I----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv---~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~  441 (507)
T PHA03392        369 V----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY---VELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKE  441 (507)
T ss_pred             E----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHH---HHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHHHHH
Confidence            8    5566788999999999999865432    23333   34456666553  3779999999999999776555554


Q ss_pred             HHHHHH
Q 016648          329 AARQEM  334 (385)
Q Consensus       329 ~a~~~~  334 (385)
                      -++...
T Consensus       442 ls~~~~  447 (507)
T PHA03392        442 LRHLIR  447 (507)
T ss_pred             HHHHHH
Confidence            444443

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.31  E-value=0.0024  Score=58.76  Aligned_cols=251  Identities=10%  Similarity=0.049  Sum_probs=136.3

Q ss_pred             HHHHHhhccCCCEEEeCCCchh-------HHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           54 RIISEVARFKPDIIHASSPGIM-------VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        54 ~l~~~i~~~~pDiI~~~~~~~~-------~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .+.+.+++  .|+++.-+...+       .+...+.++..|+|+++.-++..|...         +..+...+.+++++|
T Consensus       110 ~~~~~l~~--aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gqsiGPf~~---------~~~r~l~r~vl~~~~  178 (426)
T PRK10017        110 DFVRLLSG--YDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGHSVGPFQD---------EQFNQLANYVFGHCD  178 (426)
T ss_pred             HHHHHHHh--CCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECCcCCCcCC---------HHHHHHHHHHHhcCC
Confidence            33444444  499988653221       122234667889999998888765432         223457788899999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCC----hhhHhhhcCCCCCCcEEEE-Eeecccc-c-----
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS----SEMRWRLSNGEPDKPLIVH-VGRLGVE-K-----  195 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~-~G~~~~~-k-----  195 (385)
                      .|.+=.+...+.+++.+. +..++.+.+..+-.-  ++....    ........ ....+.+|+. +..+.+. +     
T Consensus       179 ~ItvRD~~S~~~Lk~lGv-~~~~v~~~aDpAF~L--~~~~~~~~~~~~~~~~~~-~~~~~~~Vgisvr~~~~~~~~~~~~  254 (426)
T PRK10017        179 ALILRESVSLDLMKRSNI-TTAKVEHGVDTAWLV--DHHTEDFTASYAVQHWLD-VAAQQKTVAITLRELAPFDKRLGTT  254 (426)
T ss_pred             EEEEccHHHHHHHHHhCC-CccceEEecChhhhC--Cccccccccchhhhhhhc-ccccCCEEEEEeccccccccccccc
Confidence            999988888888888764 445676665432111  111000    00000011 1123334433 3333211 1     


Q ss_pred             --c-HHHHHHHHHhC--CCceEEEEeC-------CccH-H---HHHHHHcCC-Ce-EEecccChHHHHHHHHhCcEEEEc
Q 016648          196 --S-LDFLKRVMDRL--PEARIAFIGD-------GPYR-E---ELEKMFTGM-PA-VFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       196 --~-~~~l~~a~~~~--~~~~l~i~G~-------g~~~-~---~l~~~~~~~-~i-~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                        . ...+.++++.+  .+.+++++..       +++. .   .+.+..... ++ .+.+..+..|+..++++||++|..
T Consensus       255 ~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~  334 (426)
T PRK10017        255 QQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGT  334 (426)
T ss_pred             HHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEe
Confidence              1 13333444433  3566665542       1221 2   222222221 22 334445567899999999999843


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEecCC-CCCcccccCCCCCeeEee--CCCCHHHHHHHHhHhhcCHHHHHHH
Q 016648          258 SESETLGLVVLEAMSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLF--NPGDLDDCLSKLEPLLYNQELRETM  326 (385)
Q Consensus       258 s~~e~~~~~~~Ea~a~G~PvI~s~~~-~~~e~~~~~~~~~~g~~~--~~~~~~~l~~~i~~ll~~~~~~~~~  326 (385)
                      -.     .+++=|++.|+|+|+-... -+..++..  -|...++.  +.-+.+++.+.+.++++|.+..++.
T Consensus       335 Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~--lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~  399 (426)
T PRK10017        335 RL-----HSAIISMNFGTPAIAINYEHKSAGIMQQ--LGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNAR  399 (426)
T ss_pred             cc-----hHHHHHHHcCCCEEEeeehHHHHHHHHH--cCCccEEechhhCCHHHHHHHHHHHHhCHHHHHHH
Confidence            32     2466699999999976532 22333310  02222323  3346788999999999987765443

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.27  E-value=8.8e-06  Score=71.61  Aligned_cols=104  Identities=22%  Similarity=0.276  Sum_probs=70.4

Q ss_pred             HHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC--CCCCeeEe-eC------CCCHHHHHHHH
Q 016648          243 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--QDGKIGYL-FN------PGDLDDCLSKL  313 (385)
Q Consensus       243 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~--~~~~~g~~-~~------~~~~~~l~~~i  313 (385)
                      |..++.+.|++.|+||.+|.+|-+..|+-.+|+|-|+|+.+|..-++++.  .+...|+. ++      .++++++++.+
T Consensus       493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m  572 (692)
T KOG3742|consen  493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFM  572 (692)
T ss_pred             CHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHH
Confidence            57788999999999999999999999999999999999988765444211  12224443 33      23455566555


Q ss_pred             hHhhcCHHHHHHHHHHHHHH-HH-hCCHHHHHHHHH
Q 016648          314 EPLLYNQELRETMGQAARQE-ME-KYDWRAATRTIR  347 (385)
Q Consensus       314 ~~ll~~~~~~~~~~~~a~~~-~~-~~s~~~~~~~~~  347 (385)
                      ..... ...++++-++.+.. +. -.+|..+...|.
T Consensus       573 ~~F~~-qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~  607 (692)
T KOG3742|consen  573 YEFCK-QSRRQRIIQRNRTERLSDLLDWKYLGRYYR  607 (692)
T ss_pred             HHHHH-HHHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence            55543 33455555555443 33 478888776665

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.18  E-value=6.1e-05  Score=62.73  Aligned_cols=139  Identities=10%  Similarity=0.110  Sum_probs=80.7

Q ss_pred             CCcEEEEEeeccccccHHHHHHHHHhCCCceEEEE-eC-CccHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEc
Q 016648          181 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI-GD-GPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~-G~-g~~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                      .+-+++..|.-++..=.-.++..+.+- ++.+.++ |. .+..+.+.+.+.+ .++.++-..  ++|.++|++||+.|..
T Consensus       158 ~r~ilI~lGGsDpk~lt~kvl~~L~~~-~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~--~dma~LMke~d~aI~A  234 (318)
T COG3980         158 KRDILITLGGSDPKNLTLKVLAELEQK-NVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDT--NDMAELMKEADLAISA  234 (318)
T ss_pred             hheEEEEccCCChhhhHHHHHHHhhcc-CeeEEEEecCCCcchhHHHHHHhhCCCeeeEecc--hhHHHHHHhcchheec
Confidence            344677777766532233333333333 3555553 42 3444555555544 467777666  8999999999999854


Q ss_pred             CCCCCCcHHHHHHHhcCCcEE----EecCCCCCcccccC-CCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHH
Q 016648          258 SESETLGLVVLEAMSSGIPVV----GVRAGGIPDIIPED-QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA  330 (385)
Q Consensus       258 s~~e~~~~~~~Ea~a~G~PvI----~s~~~~~~e~~~~~-~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a  330 (385)
                      .     |.++.|++..|+|.+    +.+.......++.. ...+.|+-   .........+.++.+|+..++.+....
T Consensus       235 a-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~---l~~~~~~~~~~~i~~d~~~rk~l~~~~  304 (318)
T COG3980         235 A-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH---LKDLAKDYEILQIQKDYARRKNLSFGS  304 (318)
T ss_pred             c-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC---CchHHHHHHHHHhhhCHHHhhhhhhcc
Confidence            3     889999999999943    23333333333100 00112222   245566677778888877766655433

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=98.18  E-value=1.5e-05  Score=63.47  Aligned_cols=92  Identities=18%  Similarity=0.025  Sum_probs=66.3

Q ss_pred             CCCEEEeCCCchhHHHHHHHH--HHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHH
Q 016648           63 KPDIIHASSPGIMVFGALIIA--KLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  140 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~--~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  140 (385)
                      +.||++++.....++...+..  +..|.|+++.+|+.  ++....+....++.++..++.+.+.+|.+|+.|+.+.+++.
T Consensus        92 ~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGl--EWkR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~  169 (185)
T PF09314_consen   92 KYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGL--EWKRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIK  169 (185)
T ss_pred             cCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcc--hhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHH
Confidence            678999987642222222232  33577999988874  23333333445556677889999999999999999999999


Q ss_pred             HhcccCCCcEEEeeCCCC
Q 016648          141 AARVTAANKIRIWKKGVD  158 (385)
Q Consensus       141 ~~~~~~~~~i~vi~~~v~  158 (385)
                      +.+.  ..+..+|++|.|
T Consensus       170 ~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  170 ERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             HHcC--CCCcEEecCCCC
Confidence            9986  457889999976

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.14  E-value=2.1e-07  Score=74.40  Aligned_cols=110  Identities=16%  Similarity=0.254  Sum_probs=68.1

Q ss_pred             ceEEE-EeCCccHHHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC--
Q 016648          210 ARIAF-IGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG--  284 (385)
Q Consensus       210 ~~l~i-~G~g~~~~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~--  284 (385)
                      .++++ +|.....+.... ...  .++.+.++.  +++.++|+.||++|.    -+.+.++.|++++|+|.|.-+.+.  
T Consensus        32 ~~viv~~G~~~~~~~~~~-~~~~~~~v~~~~~~--~~m~~~m~~aDlvIs----~aG~~Ti~E~l~~g~P~I~ip~~~~~  104 (167)
T PF04101_consen   32 IQVIVQTGKNNYEELKIK-VENFNPNVKVFGFV--DNMAELMAAADLVIS----HAGAGTIAEALALGKPAIVIPLPGAA  104 (167)
T ss_dssp             CCCCCCCTTCECHHHCCC-HCCTTCCCEEECSS--SSHHHHHHHHSEEEE----CS-CHHHHHHHHCT--EEEE--TTT-
T ss_pred             cEEEEEECCCcHHHHHHH-HhccCCcEEEEech--hhHHHHHHHcCEEEe----CCCccHHHHHHHcCCCeeccCCCCcc
Confidence            45544 555543333222 332  479999998  789999999999994    345789999999999998776655  


Q ss_pred             ------CCcccccCCCCCeeEeeC--CCCHHHHHHHHhHhhcCHHHHHHHHHH
Q 016648          285 ------IPDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQA  329 (385)
Q Consensus       285 ------~~e~~~~~~~~~~g~~~~--~~~~~~l~~~i~~ll~~~~~~~~~~~~  329 (385)
                            ....+   .....+..+.  ..+.++|.++|..+++++.....+.++
T Consensus       105 ~~~q~~na~~~---~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~  154 (167)
T PF04101_consen  105 DNHQEENAKEL---AKKGAAIMLDESELNPEELAEAIEELLSDPEKLKEMAKA  154 (167)
T ss_dssp             T-CHHHHHHHH---HHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred             hHHHHHHHHHH---HHcCCccccCcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence                  12222   1222233222  224678999999999998776655544

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PLN02670 transferase, transferring glycosyl groups

Probab=98.10  E-value=0.00013  Score=67.77  Aligned_cols=163  Identities=9%  Similarity=0.044  Sum_probs=99.2

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeCCc----------cHHHHHHHHcCCCeEEecccChHHHHHH
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP----------YREELEKMFTGMPAVFTGMLLGEELSQA  247 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~g~----------~~~~l~~~~~~~~i~~~g~~~~~~~~~~  247 (385)
                      +...+.+.+|+...  ..-+..+..+++..+. .|+.+-..+          ..+.+.+..++.++.+.+++|+.++   
T Consensus       277 ~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~I---  352 (472)
T PLN02670        277 VNSVVYVALGTEASLRREEVTELALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKI---  352 (472)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHH---
Confidence            35666777887632  3456777788887765 444432211          1122333344446888899998886   


Q ss_pred             HHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeCC------CCHHHHHHHHhHhh
Q 016648          248 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP------GDLDDCLSKLEPLL  317 (385)
Q Consensus       248 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~~------~~~~~l~~~i~~ll  317 (385)
                      ++...+..+-  ..+.-++++||+++|+|+|+....    .....+   ...+.|..+..      -+.+++.+++.+++
T Consensus       353 L~H~~v~~Fv--tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm  427 (472)
T PLN02670        353 LSHESVGGFL--THCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL---HGKKLGLEVPRDERDGSFTSDSVAESVRLAM  427 (472)
T ss_pred             hcCcccceee--ecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH---HHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence            6666663332  345567899999999999986533    233344   33456665532      36899999999999


Q ss_pred             cCHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHH
Q 016648          318 YNQELRETMGQAARQEMEK----YDWRAATRTIRNEQYN  352 (385)
Q Consensus       318 ~~~~~~~~~~~~a~~~~~~----~s~~~~~~~~~~~iy~  352 (385)
                      .+++ -+++++++++..+.    =+.+++++.+.+.+++
T Consensus       428 ~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~  465 (472)
T PLN02670        428 VDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRE  465 (472)
T ss_pred             cCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence            8742 23455555555433    4455555555543333

>PLN02448 UDP-glycosyltransferase family protein

Probab=97.94  E-value=0.00079  Score=62.97  Aligned_cols=143  Identities=15%  Similarity=0.130  Sum_probs=87.4

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEc
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                      +...+.+.+|+...  ..-+..++++++.. +..++++..++ ...+.+.. ..++.+.+++|+.++   +...++..+-
T Consensus       273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~-~~~~~~~~-~~~~~v~~w~pQ~~i---L~h~~v~~fv  346 (459)
T PLN02448        273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-GVRFLWVARGE-ASRLKEIC-GDMGLVVPWCDQLKV---LCHSSVGGFW  346 (459)
T ss_pred             CCceEEEeecccccCCHHHHHHHHHHHHhC-CCCEEEEEcCc-hhhHhHhc-cCCEEEeccCCHHHH---hccCccceEE
Confidence            34567777887632  23366777777775 45676655432 11233322 236777899988876   5566662222


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCC-CCeeEeeC-------CCCHHHHHHHHhHhhcCH-HHHH
Q 016648          258 SESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFN-------PGDLDDCLSKLEPLLYNQ-ELRE  324 (385)
Q Consensus       258 s~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~-~~~g~~~~-------~~~~~~l~~~i~~ll~~~-~~~~  324 (385)
                        ..+.-++++||+++|+|+|+-...    .....+   .+ -+.|+-+.       .-+.+++.+++++++.++ +..+
T Consensus       347 --tHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v---~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~  421 (459)
T PLN02448        347 --THCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLI---VEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGK  421 (459)
T ss_pred             --ecCchhHHHHHHHcCCCEEeccccccchhhHHHH---HHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHH
Confidence              345567899999999999986543    223333   22 13344442       237899999999999864 3445


Q ss_pred             HHHHHHHHH
Q 016648          325 TMGQAARQE  333 (385)
Q Consensus       325 ~~~~~a~~~  333 (385)
                      ++++++.+.
T Consensus       422 ~~r~~a~~~  430 (459)
T PLN02448        422 EMRRRAKEL  430 (459)
T ss_pred             HHHHHHHHH
Confidence            555555544

>PLN03004 UDP-glycosyltransferase

Probab=97.93  E-value=0.00026  Score=65.52  Aligned_cols=135  Identities=13%  Similarity=0.096  Sum_probs=87.4

Q ss_pred             CCCCcEEEEEeecc--ccccHHHHHHHHHhCCCceEEEEeCCc-------------cHHHHHHHHcCCCeEEecccChHH
Q 016648          179 EPDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDGP-------------YREELEKMFTGMPAVFTGMLLGEE  243 (385)
Q Consensus       179 ~~~~~~i~~~G~~~--~~k~~~~l~~a~~~~~~~~l~i~G~g~-------------~~~~l~~~~~~~~i~~~g~~~~~~  243 (385)
                      +++..+.+.+|+..  ..+-+..+..+++..+. .++.+-..+             ..+.+.+..++.++.+.+++|+.+
T Consensus       268 ~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~  346 (451)
T PLN03004        268 PEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQ-RFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP  346 (451)
T ss_pred             CCCceEEEEecccccCCHHHHHHHHHHHHHCCC-CEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH
Confidence            34567788888873  23456777788887765 444433211             112233444556899999999888


Q ss_pred             HHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC----CCCCcccccCCCCCeeEeeC-----CCCHHHHHHHHh
Q 016648          244 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLE  314 (385)
Q Consensus       244 ~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~----~~~~e~~~~~~~~~~g~~~~-----~~~~~~l~~~i~  314 (385)
                      +   ++.+++..+-+  .+.-++++||+++|+|+|+...    ......+.  ..-+.|..++     .-+.++++++++
T Consensus       347 i---L~H~~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~--~~~g~g~~l~~~~~~~~~~e~l~~av~  419 (451)
T PLN03004        347 V---LNHKAVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIV--DEIKIAISMNESETGFVSSTEVEKRVQ  419 (451)
T ss_pred             H---hCCCccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHH--HHhCceEEecCCcCCccCHHHHHHHHH
Confidence            5   78888843333  3556789999999999998653    23333330  1235665554     237899999999


Q ss_pred             HhhcCHH
Q 016648          315 PLLYNQE  321 (385)
Q Consensus       315 ~ll~~~~  321 (385)
                      +++++++
T Consensus       420 ~vm~~~~  426 (451)
T PLN03004        420 EIIGECP  426 (451)
T ss_pred             HHhcCHH
Confidence            9998754

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=97.91  E-value=0.00082  Score=65.17  Aligned_cols=281  Identities=16%  Similarity=0.128  Sum_probs=165.0

Q ss_pred             HHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcCh
Q 016648           54 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  133 (385)
Q Consensus        54 ~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~  133 (385)
                      .+.+..+  .-|+|++|+.+.+.++.+.-.+..+..+-+..|..+|....-.......+     .-..+..+|.+-..+.
T Consensus       133 ~ive~~~--~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~e-----Il~gll~~~~i~f~t~  205 (732)
T KOG1050|consen  133 KIVEVYE--EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKE-----ILRGLLYDDLLGFHTD  205 (732)
T ss_pred             HHHHhcc--CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHH-----HHHhhhccCccccccc
Confidence            3444444  67999999987665555544444566666778887665322111111111     1123344555544444


Q ss_pred             hHHHHHHHh------------cc-------cCCCcEEEeeCCCCCCCCCCCCCC---hhhHhhhcCCCCCCcEEEEEeec
Q 016648          134 AIGKDLEAA------------RV-------TAANKIRIWKKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGRL  191 (385)
Q Consensus       134 ~~~~~~~~~------------~~-------~~~~~i~vi~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~G~~  191 (385)
                      ..+..+...            ++       .....+..+|-|+|...+......   .....+......++.+++-+-++
T Consensus       206 d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~  285 (732)
T KOG1050|consen  206 DYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRL  285 (732)
T ss_pred             cHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEeccccc
Confidence            443333221            00       112345567777777665433221   11222222233477788888899


Q ss_pred             cccccHHHHHHHHHh----CC----CceEEEEeC-----CccHHHHHHHHc----CC----------C-eEEecccChHH
Q 016648          192 GVEKSLDFLKRVMDR----LP----EARIAFIGD-----GPYREELEKMFT----GM----------P-AVFTGMLLGEE  243 (385)
Q Consensus       192 ~~~k~~~~l~~a~~~----~~----~~~l~i~G~-----g~~~~~l~~~~~----~~----------~-i~~~g~~~~~~  243 (385)
                      +..||...=+.++++    +|    ++.++.+..     +...++++....    ..          . ..+...++..+
T Consensus       286 d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~  365 (732)
T KOG1050|consen  286 DSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLE  365 (732)
T ss_pred             ccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHH
Confidence            999887655555544    33    344444432     221122222211    11          1 45778889999


Q ss_pred             HHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC----CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          244 LSQAYASGDVFVMPSESETLGLVVLEAMSSG----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       244 ~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G----~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      +.+++.-+|+.+..+..+|..++.+|+..|.    .+.|.+...|..+..     +....++.+.|.++++..|..+++.
T Consensus       366 l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl-----~d~aivvnpw~~~~~~~~i~~al~~  440 (732)
T KOG1050|consen  366 LLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL-----EDAAIVVNPWDGDEFAILISKALTM  440 (732)
T ss_pred             HhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc-----cccCEEECCcchHHHHHHHHHHhhc
Confidence            9999999999999999999999999999884    678888777766665     4456788899999999999999986


Q ss_pred             HHHHHHHHH-HHHHHHHhCCHHHHHHHH
Q 016648          320 QELRETMGQ-AARQEMEKYDWRAATRTI  346 (385)
Q Consensus       320 ~~~~~~~~~-~a~~~~~~~s~~~~~~~~  346 (385)
                      ++.-.+++. ...+.+...+...++..+
T Consensus       441 s~~e~~~r~~~~~~~v~~~~~~~W~~~~  468 (732)
T KOG1050|consen  441 SDEERELREPKHYKYVSTHDVVYWAKSF  468 (732)
T ss_pred             CHHHHhhcchhhhhhhcchhHHHHHHHH
Confidence            654444333 223332334444444444

>PLN02764 glycosyltransferase family protein

Probab=97.82  E-value=0.00053  Score=63.34  Aligned_cols=147  Identities=16%  Similarity=0.138  Sum_probs=87.0

Q ss_pred             CCCCcEEEEEeeccc--cccHHHHHHHHHhC-CCceEEEEe-CC------ccHHHHHHHHcCCCeEEecccChHHHHHHH
Q 016648          179 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRL-PEARIAFIG-DG------PYREELEKMFTGMPAVFTGMLLGEELSQAY  248 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~-~~~~l~i~G-~g------~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~  248 (385)
                      +++..+.+.+|+...  .+.+..+...++.. .++.+++-- .+      ...+.++...++.++.+.+++|+.++   +
T Consensus       255 ~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~v---L  331 (453)
T PLN02764        255 EPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLI---L  331 (453)
T ss_pred             CCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHH---h
Confidence            455677888888733  33344444443332 223333321 11      11123333344557888899999887   5


Q ss_pred             HhC--cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeC-----CCCHHHHHHHHhHhh
Q 016648          249 ASG--DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPLL  317 (385)
Q Consensus       249 ~~a--di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~-----~~~~~~l~~~i~~ll  317 (385)
                      +..  .++|    ..+.-++++||+.+|+|+|+-+..+    ....+.  +.-..|+.+.     .-+.+++.+++++++
T Consensus       332 ~h~~v~~Fv----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~--~~~g~gv~~~~~~~~~~~~e~i~~av~~vm  405 (453)
T PLN02764        332 SHPSVGCFV----SHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLS--DELKVSVEVAREETGWFSKESLRDAINSVM  405 (453)
T ss_pred             cCcccCeEE----ecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHH--HHhceEEEeccccCCccCHHHHHHHHHHHh
Confidence            554  4466    4455778999999999999875432    223330  1234455432     137899999999999


Q ss_pred             cCH-HHHHHHHHHHHHHH
Q 016648          318 YNQ-ELRETMGQAARQEM  334 (385)
Q Consensus       318 ~~~-~~~~~~~~~a~~~~  334 (385)
                      +++ +..+++++++++..
T Consensus       406 ~~~~~~g~~~r~~a~~~~  423 (453)
T PLN02764        406 KRDSEIGNLVKKNHTKWR  423 (453)
T ss_pred             cCCchhHHHHHHHHHHHH
Confidence            875 45566666666553

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=97.81  E-value=0.0066  Score=50.74  Aligned_cols=289  Identities=14%  Similarity=0.064  Sum_probs=134.2

Q ss_pred             HHHhccCCCCccccceeeccccccccCCCCcccccccccchHHHHHHhhccCCCEEEeCCCchhHH----HHHHHHHHhC
Q 016648           12 LFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVF----GALIIAKLLC   87 (385)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~----~~~~~~~~~~   87 (385)
                      ...-..|.+..++.+....+.+...-....+.-..+...-+.++.+.+.  .+||+.+++.+....    .-..-.-..+
T Consensus        12 ~wf~KNg~~~~i~~a~e~sftR~dsH~~~~~si~k~~~~e~de~v~~vN--~yDI~m~nSvPa~~vqE~~iNnY~kii~~   89 (355)
T PF11440_consen   12 DWFDKNGVEFTIVSADEKSFTRPDSHDSKSFSIPKYLAKEYDETVKKVN--DYDIVMFNSVPATKVQEAIINNYEKIIKK   89 (355)
T ss_dssp             HHHHHTT-EEEEEEETSS--TTTTSSS-TTTEEEE-TTTHHHHHHHHHT--SSSEEEEEE--BTTS-HHHHHHHHHHHHC
T ss_pred             HHHHhcCCeeEEEEecccccCCccccccceeeeehhhHHHHHHHHHHhh--ccCEEEEecccCchHHHHHHHHHHHHHHh
Confidence            3344556666666666555544444333332222223333444444444  789999986432211    1111111223


Q ss_pred             ----CCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhH--HHHHH-Hhccc---CCCcEEEeeCCC
Q 016648           88 ----VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI--GKDLE-AARVT---AANKIRIWKKGV  157 (385)
Q Consensus        88 ----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~--~~~~~-~~~~~---~~~~i~vi~~~v  157 (385)
                          +++|...|++......+..          ...-+++.+|.|++.|...  ...+. ...+.   ..+++.-.|...
T Consensus        90 Ik~~ik~V~~~Hdh~~lsI~rn~----------~le~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~  159 (355)
T PF11440_consen   90 IKPSIKVVGFMHDHNKLSIDRNP----------YLEGTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLFDRIKKFPMVF  159 (355)
T ss_dssp             S-TTSEEEEEE---SHHHHTTBS----------SHHHHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SSS-------EE
T ss_pred             ccccceeEEEeeccceeeccccc----------cHHHHHHhhcEEEeccccchHHHHHHHhhccccCchhhhhhhcceee
Confidence                3467888996533222111          2334678999999987542  11122 22221   123444444333


Q ss_pred             CCCCCCCCCCChhhHhhhcCCCCCCcEE---EEEeeccccccHHHHHHHHHhC---CCceEEEEeCCccHHHHHHHHc--
Q 016648          158 DSESFHPRFRSSEMRWRLSNGEPDKPLI---VHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFT--  229 (385)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~G~~~~~k~~~~l~~a~~~~---~~~~l~i~G~g~~~~~l~~~~~--  229 (385)
                      ..   ++...-...+.... .....+..   +|+|+....||...+++.-+..   ++.+-++-|-......+.-.-.  
T Consensus       160 nf---qpp~~i~~~Rstyw-kd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~  235 (355)
T PF11440_consen  160 NF---QPPMDINKYRSTYW-KDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGI  235 (355)
T ss_dssp             E-------B-HHHHHHHH----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT-
T ss_pred             ec---CCcccHHHHHHHHh-hhhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCc
Confidence            22   22111112222221 12233444   7999999999999999877665   4677778772211121111111  


Q ss_pred             ---------------CC--CeEEecccChHHHHHHHHhCcEEEEcCC------CCCCcHHHHHHHhcCC-cEEEecCCCC
Q 016648          230 ---------------GM--PAVFTGMLLGEELSQAYASGDVFVMPSE------SETLGLVVLEAMSSGI-PVVGVRAGGI  285 (385)
Q Consensus       230 ---------------~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~------~e~~~~~~~Ea~a~G~-PvI~s~~~~~  285 (385)
                                     ..  .+.++|..-++|+.+.|+.+-+...-+.      .+.+--+-+|..|||. ||.-...|..
T Consensus       236 ~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN  315 (355)
T PF11440_consen  236 PYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGEN  315 (355)
T ss_dssp             -EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHH
T ss_pred             ccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeecccccc
Confidence                           11  2778888888999999999988876543      2356778999999995 6665443322


Q ss_pred             -------CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          286 -------PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       286 -------~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                             ..++   ......+.++.+|.++-.+.|.++.++
T Consensus       316 ~r~~~D~~~~~---~~~~~~I~~De~dle~T~ekl~E~a~~  353 (355)
T PF11440_consen  316 NRFTLDGTRYI---DHPYSAIYFDENDLESTVEKLIEVANN  353 (355)
T ss_dssp             SB-TTTSSBGG---SS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred             ceeeecCceee---ccCcceeEeccchHHHHHHHHHHHhcc
Confidence                   2344   344456788888999888888887665

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>PLN02562 UDP-glycosyltransferase

Probab=97.80  E-value=0.00079  Score=62.60  Aligned_cols=135  Identities=10%  Similarity=0.009  Sum_probs=86.1

Q ss_pred             CCcEEEEEeecc---ccccHHHHHHHHHhCCCceEEE-EeCC---ccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcE
Q 016648          181 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAF-IGDG---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDV  253 (385)
Q Consensus       181 ~~~~i~~~G~~~---~~k~~~~l~~a~~~~~~~~l~i-~G~g---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi  253 (385)
                      +..+++.+|+..   ..+-+..+..+++..+. +++. +..+   ...+.+.+.. ..++.+.+++|+.++   ++..++
T Consensus       273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~-~fiW~~~~~~~~~l~~~~~~~~-~~~~~v~~w~PQ~~i---L~h~~v  347 (448)
T PLN02562        273 NSVIYISFGSWVSPIGESNVRTLALALEASGR-PFIWVLNPVWREGLPPGYVERV-SKQGKVVSWAPQLEV---LKHQAV  347 (448)
T ss_pred             CceEEEEecccccCCCHHHHHHHHHHHHHCCC-CEEEEEcCCchhhCCHHHHHHh-ccCEEEEecCCHHHH---hCCCcc
Confidence            456778888853   34557788888888764 5444 3321   1222222322 246788899998886   666665


Q ss_pred             EEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCC-CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHH
Q 016648          254 FVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRET  325 (385)
Q Consensus       254 ~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~-~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~  325 (385)
                      ..+-  ..+.-++++||+.+|+|+|+...-    .....+   .+ -..|+-+..-+.+++++++++++.+++.+++
T Consensus       348 ~~fv--tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~---~~~~g~g~~~~~~~~~~l~~~v~~~l~~~~~r~~  419 (448)
T PLN02562        348 GCYL--THCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYI---VDVWKIGVRISGFGQKEVEEGLRKVMEDSGMGER  419 (448)
T ss_pred             ceEE--ecCcchhHHHHHHcCCCEEeCCcccchHHHHHHH---HHHhCceeEeCCCCHHHHHHHHHHHhCCHHHHHH
Confidence            3333  334567899999999999986543    233333   22 2455555556889999999999988655443

>PLN00164 glucosyltransferase; Provisional

Probab=97.79  E-value=0.0036  Score=58.79  Aligned_cols=146  Identities=14%  Similarity=0.106  Sum_probs=86.5

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEE-EEeCCc---------------cHHHHHHHHcCCCeEEecccCh
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGP---------------YREELEKMFTGMPAVFTGMLLG  241 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~-i~G~g~---------------~~~~l~~~~~~~~i~~~g~~~~  241 (385)
                      +...+.+.+|+...  .+-+..+..+++..+. .++ ++....               ..+.+.+..++.++.+.+++|+
T Consensus       271 ~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ  349 (480)
T PLN00164        271 PASVVFLCFGSMGFFDAPQVREIAAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQ  349 (480)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCH
Confidence            34456677787522  2337777777777643 544 333211               1112333334456888899988


Q ss_pred             HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeCC-------CCHHHHH
Q 016648          242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP-------GDLDDCL  310 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~~-------~~~~~l~  310 (385)
                      .++   +..+++..+-+  .+.-++++||+++|+|+|+-..-    .....+.  +.-+.|+.+..       -+.+++.
T Consensus       350 ~~i---L~h~~vg~fvt--H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvG~~~~~~~~~~~~~~~e~l~  422 (480)
T PLN00164        350 KEI---LAHAAVGGFVT--HCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELV--ADMGVAVAMKVDRKRDNFVEAAELE  422 (480)
T ss_pred             HHH---hcCcccCeEEe--ecccchHHHHHHcCCCEEeCCccccchhHHHHHH--HHhCeEEEeccccccCCcCcHHHHH
Confidence            776   77777533333  34456899999999999986532    2232220  22345655431       2689999


Q ss_pred             HHHhHhhcCHH-HHHHHHHHHHHH
Q 016648          311 SKLEPLLYNQE-LRETMGQAARQE  333 (385)
Q Consensus       311 ~~i~~ll~~~~-~~~~~~~~a~~~  333 (385)
                      ++|.+++.+++ +.+++++++++.
T Consensus       423 ~av~~vm~~~~~~~~~~r~~a~~~  446 (480)
T PLN00164        423 RAVRSLMGGGEEEGRKAREKAAEM  446 (480)
T ss_pred             HHHHHHhcCCchhHHHHHHHHHHH
Confidence            99999998653 345555555544

>PLN02208 glycosyltransferase family protein

Probab=97.76  E-value=0.0049  Score=57.18  Aligned_cols=205  Identities=10%  Similarity=0.057  Sum_probs=107.6

Q ss_pred             HHHhCCeEEEcChhHHHH-HHHhcccC-CCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccc--cc
Q 016648          121 LHRAADLTLVPSVAIGKD-LEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE--KS  196 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~-~~~~~~~~-~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~--k~  196 (385)
                      ....+|.|++.|-...|. +.+....+ ..++..|..-..... .....+.+...=+...+++..+.+.+|+...-  +.
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q  268 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQ  268 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHH
Confidence            456789999988655443 22222111 124544442221110 00111111111122223456677778877431  21


Q ss_pred             HHH-HHHH-HHhCCCceEEEEeC-C--c----cHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHH
Q 016648          197 LDF-LKRV-MDRLPEARIAFIGD-G--P----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  267 (385)
Q Consensus       197 ~~~-l~~a-~~~~~~~~l~i~G~-g--~----~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~  267 (385)
                      +.. +..+ +...| +.+++--. +  .    ..+.+.+...+.++.+.+++|+.++   ++...+..+-+  .+.-+++
T Consensus       269 ~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~i---L~H~~v~~Fvt--HcG~nS~  342 (442)
T PLN02208        269 FQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLI---LDHPSIGCFVN--HCGPGTI  342 (442)
T ss_pred             HHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHH---hcCCccCeEEc--cCCchHH
Confidence            222 2222 33333 33333211 1  1    1223334444568888899999886   66676544333  3556789


Q ss_pred             HHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCC-----CCHHHHHHHHhHhhcCH-HHHHHHHHHHHHHH
Q 016648          268 LEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP-----GDLDDCLSKLEPLLYNQ-ELRETMGQAARQEM  334 (385)
Q Consensus       268 ~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~-----~~~~~l~~~i~~ll~~~-~~~~~~~~~a~~~~  334 (385)
                      +||+++|+|+|+...-+    ....+.  +.-+.|..++.     -+.+++.++|+++++++ +..+++++++++..
T Consensus       343 ~Eai~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~  417 (442)
T PLN02208        343 WESLVSDCQMVLIPFLSDQVLFTRLMT--EEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLK  417 (442)
T ss_pred             HHHHHcCCCEEecCcchhhHHHHHHHH--HHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence            99999999999875432    223220  22345655532     37899999999999865 45566666666553

>PLN03007 UDP-glucosyltransferase family protein

Probab=97.71  E-value=0.0026  Score=59.91  Aligned_cols=133  Identities=12%  Similarity=0.138  Sum_probs=80.5

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEE-EeCCc--------cHHHHHHHHcCCCeEEecccChHHHHHHH
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDGP--------YREELEKMFTGMPAVFTGMLLGEELSQAY  248 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i-~G~g~--------~~~~l~~~~~~~~i~~~g~~~~~~~~~~~  248 (385)
                      +...+.+.+|+...  .+.+..+.++++..+. .+++ ++...        ..+.+.+.....++++.+++|+.++   +
T Consensus       284 ~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~i---L  359 (482)
T PLN03007        284 PDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQ-NFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLI---L  359 (482)
T ss_pred             CCceEEEeecCCcCCCHHHHHHHHHHHHHCCC-CEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHH---h
Confidence            45567778887643  3456666777777643 4443 44211        1123333344558899999988664   7


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEee----------CCCCHHHHHHHHh
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLF----------NPGDLDDCLSKLE  314 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~----------~~~~~~~l~~~i~  314 (385)
                      ..+++..+-  ..+.-++++||+++|+|+|+...-    .....+.  +.-..|+-+          ..-+.+++.++++
T Consensus       360 ~h~~v~~fv--tH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~  435 (482)
T PLN03007        360 DHQATGGFV--THCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVT--QVLRTGVSVGAKKLVKVKGDFISREKVEKAVR  435 (482)
T ss_pred             ccCccceee--ecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHH--HhhcceeEeccccccccccCcccHHHHHHHHH
Confidence            777763333  334467899999999999987543    2222220  001222221          1237899999999


Q ss_pred             HhhcCH
Q 016648          315 PLLYNQ  320 (385)
Q Consensus       315 ~ll~~~  320 (385)
                      +++.++
T Consensus       436 ~~m~~~  441 (482)
T PLN03007        436 EVIVGE  441 (482)
T ss_pred             HHhcCc
Confidence            999875

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=97.68  E-value=0.0032  Score=54.57  Aligned_cols=249  Identities=16%  Similarity=0.091  Sum_probs=133.4

Q ss_pred             HHHHhhccCCCEEEeCCCchhH----HHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           55 IISEVARFKPDIIHASSPGIMV----FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        55 l~~~i~~~~pDiI~~~~~~~~~----~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      +...++.++|||+++.......    ...+-..+..+.+.+..+.+.... .......|.   ....+..+-+..|.|++
T Consensus        98 il~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~-p~~~~~~w~---~~~~~~~I~r~yD~V~v  173 (400)
T COG4671          98 ILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDI-PQELEADWR---RAETVRLINRFYDLVLV  173 (400)
T ss_pred             HHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhhc-hhhhccchh---hhHHHHHHHHhheEEEE
Confidence            5566788999999998642211    222233345565565555553211 000000111   12256777889999999


Q ss_pred             cChhHHHHHHHhcccC-CCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc-cccHHHHHHHHHhCC
Q 016648          131 PSVAIGKDLEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFLKRVMDRLP  208 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~-~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~-~k~~~~l~~a~~~~~  208 (385)
                      ..+..-..+...+..+ .-+-.+.+-|.=....+......      ...+++..+++.+|.-.- ..=++..++|...++
T Consensus       174 ~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~------~~~pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~  247 (400)
T COG4671         174 YGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPP------HEAPEGFDILVSVGGGADGAELIETALAAAQLLA  247 (400)
T ss_pred             ecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCC------cCCCccceEEEecCCChhhHHHHHHHHHHhhhCC
Confidence            8776655555554422 11222333333211111000000      001445667788875422 222455556666555


Q ss_pred             Cce---EEEEeCCccHH---HHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          209 EAR---IAFIGDGPYRE---ELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       209 ~~~---l~i~G~g~~~~---~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +.+   +++.|.-.-..   .+...+. ..+|.+..|.  +++..++..|+..|.-.    .=+++.|-+++|||.+.-+
T Consensus       248 ~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~--~~~~~ll~gA~~vVSm~----GYNTvCeILs~~k~aLivP  321 (400)
T COG4671         248 GLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFR--NDFESLLAGARLVVSMG----GYNTVCEILSFGKPALIVP  321 (400)
T ss_pred             CCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhh--hhHHHHHHhhheeeecc----cchhhhHHHhCCCceEEec
Confidence            544   56667443333   3333333 2479999998  99999999999999443    3468999999999998765


Q ss_pred             CCCCC-cc-cccC---CCCCeeEeeC-CCCHHHHHHHHhHhhcC
Q 016648          282 AGGIP-DI-IPED---QDGKIGYLFN-PGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       282 ~~~~~-e~-~~~~---~~~~~g~~~~-~~~~~~l~~~i~~ll~~  319 (385)
                      ...-. |. +...   +-|-...+.+ .-+++.+++++..+++.
T Consensus       322 r~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~  365 (400)
T COG4671         322 RAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR  365 (400)
T ss_pred             cCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence            43222 11 1000   1122222222 22688889988888763

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=97.67  E-value=0.0096  Score=55.68  Aligned_cols=135  Identities=13%  Similarity=0.066  Sum_probs=84.0

Q ss_pred             CCCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeC---C---------------c-----cHHHHHHHHcCCCe
Q 016648          179 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGD---G---------------P-----YREELEKMFTGMPA  233 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~---g---------------~-----~~~~l~~~~~~~~i  233 (385)
                      +++..+.+.+|+...  .+-+..+..+++..+.--+..+-.   +               +     ..+.+.+..++.++
T Consensus       261 ~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~  340 (481)
T PLN02992        261 PNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGF  340 (481)
T ss_pred             CCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCE
Confidence            345677778887743  345777888888876532333310   1               0     11223334445579


Q ss_pred             EEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCC----CC
Q 016648          234 VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP----GD  305 (385)
Q Consensus       234 ~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~----~~  305 (385)
                      .+.+++|+.++   ++...+..+-  ..+.-++++||+.+|+|+|+.+..+    ....+.  +.-+.|..++.    -+
T Consensus       341 vv~~W~PQ~~i---L~h~~vg~Fi--tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~~  413 (481)
T PLN02992        341 VVPSWAPQAEI---LAHQAVGGFL--THCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLS--DELGIAVRSDDPKEVIS  413 (481)
T ss_pred             EEeecCCHHHH---hCCcccCeeE--ecCchhHHHHHHHcCCCEEecCccchhHHHHHHHH--HHhCeeEEecCCCCccc
Confidence            99999998876   6666653322  3455678999999999999875432    222330  12345555432    37


Q ss_pred             HHHHHHHHhHhhcCH
Q 016648          306 LDDCLSKLEPLLYNQ  320 (385)
Q Consensus       306 ~~~l~~~i~~ll~~~  320 (385)
                      .+++.+++.+++.++
T Consensus       414 ~~~l~~av~~vm~~~  428 (481)
T PLN02992        414 RSKIEALVRKVMVEE  428 (481)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            899999999999764

>PLN02210 UDP-glucosyl transferase

Probab=97.67  E-value=0.002  Score=60.10  Aligned_cols=132  Identities=12%  Similarity=0.130  Sum_probs=80.1

Q ss_pred             CCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEE-EeCC---ccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEE
Q 016648          181 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDG---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVF  254 (385)
Q Consensus       181 ~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i-~G~g---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~  254 (385)
                      ...+.+.+|+...  ..-+..+..+++..+ ..+++ ++..   ...+.+.+.....+..+.+++|+.++   ++.+.+.
T Consensus       269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~~-~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~i---L~h~~vg  344 (456)
T PLN02210        269 SSVVYISFGSMLESLENQVETIAKALKNRG-VPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKI---LSHMAIS  344 (456)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHhCC-CCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHH---hcCcCcC
Confidence            4567778887643  233666777777664 35444 4421   12233444332234456799988764   7777743


Q ss_pred             EEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCC-CCeeEeeC------CCCHHHHHHHHhHhhcCHH
Q 016648          255 VMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQD-GKIGYLFN------PGDLDDCLSKLEPLLYNQE  321 (385)
Q Consensus       255 v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~-~~~g~~~~------~~~~~~l~~~i~~ll~~~~  321 (385)
                      .+-  ..+.-++++||+++|+|+|+-+..+    ....+   .+ -+.|..+.      .-+.+++.+++++++.+++
T Consensus       345 ~Fi--tH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~---~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~  417 (456)
T PLN02210        345 CFV--THCGWNSTIETVVAGVPVVAYPSWTDQPIDARLL---VDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPA  417 (456)
T ss_pred             eEE--eeCCcccHHHHHHcCCCEEecccccccHHHHHHH---HHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCch
Confidence            332  2344568899999999999865432    22333   22 35665553      2378999999999997643

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.64  E-value=0.00017  Score=68.64  Aligned_cols=130  Identities=17%  Similarity=0.236  Sum_probs=79.9

Q ss_pred             CCCcEEEEEeeccc---cccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEE
Q 016648          180 PDKPLIVHVGRLGV---EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  256 (385)
Q Consensus       180 ~~~~~i~~~G~~~~---~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~  256 (385)
                      +++.+++.+|+...   .+-.+.++++++++|. +++..-++.....+     ..|+.+..++|+.++   ++...+-++
T Consensus       275 ~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~~~l-----~~n~~~~~W~PQ~~l---L~hp~v~~f  345 (500)
T PF00201_consen  275 KKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQ-RFIWKYEGEPPENL-----PKNVLIVKWLPQNDL---LAHPRVKLF  345 (500)
T ss_dssp             TTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTT-EEEEEETCSHGCHH-----HTTEEEESS--HHHH---HTSTTEEEE
T ss_pred             CCCEEEEecCcccchhHHHHHHHHHHHHhhCCC-cccccccccccccc-----cceEEEeccccchhh---hhcccceee
Confidence            34566777888642   2236678899999987 77766555322222     247899999998776   666555333


Q ss_pred             cCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeCC--CCHHHHHHHHhHhhcCHHHH
Q 016648          257 PSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELR  323 (385)
Q Consensus       257 ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~~--~~~~~l~~~i~~ll~~~~~~  323 (385)
                      -  ..|.-+++.||+.+|+|+|+-+.-    .....+   ++.+.|...+.  -+.+++.++|.++++|+...
T Consensus       346 i--tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~  413 (500)
T PF00201_consen  346 I--THGGLNSTQEALYHGVPMLGIPLFGDQPRNAARV---EEKGVGVVLDKNDLTEEELRAAIREVLENPSYK  413 (500)
T ss_dssp             E--ES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHH---HHTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHH
T ss_pred             e--eccccchhhhhhhccCCccCCCCcccCCccceEE---EEEeeEEEEEecCCcHHHHHHHHHHHHhhhHHH
Confidence            3  345678999999999999997642    223333   33445655543  36799999999999997543

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.61  E-value=0.0024  Score=59.79  Aligned_cols=129  Identities=14%  Similarity=0.160  Sum_probs=78.8

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEE-EeCCc--------cHHHHHHHHcCCCeEEecccChHHHHHHH
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDGP--------YREELEKMFTGMPAVFTGMLLGEELSQAY  248 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i-~G~g~--------~~~~l~~~~~~~~i~~~g~~~~~~~~~~~  248 (385)
                      +...+.+.+|+...  .+.+..+.++++..+. .+++ ++...        ..+.+.+.....++.+.+++|+.++   +
T Consensus       282 ~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~v---L  357 (477)
T PLN02863        282 DHKVVYVCFGSQVVLTKEQMEALASGLEKSGV-HFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAI---L  357 (477)
T ss_pred             CCceEEEEeeceecCCHHHHHHHHHHHHhCCC-cEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHH---h
Confidence            34566777887633  2346777777777644 4444 44211        1123333344557888999988665   5


Q ss_pred             Hh--CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeC-----CCCHHHHHHHHhHhh
Q 016648          249 AS--GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPLL  317 (385)
Q Consensus       249 ~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~-----~~~~~~l~~~i~~ll  317 (385)
                      ..  ++++|    ..+.-++++||+++|+|+|+-...    .....+.  +.-+.|.-+.     .-+.+++.+++.+++
T Consensus       358 ~h~~v~~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~--~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m  431 (477)
T PLN02863        358 SHRAVGAFL----THCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLV--DELKVAVRVCEGADTVPDSDELARVFMESV  431 (477)
T ss_pred             cCCCcCeEE----ecCCchHHHHHHHcCCCEEeCCccccchhhHHHHH--HhhceeEEeccCCCCCcCHHHHHHHHHHHh
Confidence            55  45566    445567899999999999986532    2333320  1224555442     126789999999988


Q ss_pred             c
Q 016648          318 Y  318 (385)
Q Consensus       318 ~  318 (385)
                      .
T Consensus       432 ~  432 (477)
T PLN02863        432 S  432 (477)
T ss_pred             h
Confidence            4

>PLN00414 glycosyltransferase family protein

Probab=97.60  E-value=0.0019  Score=59.88  Aligned_cols=149  Identities=13%  Similarity=0.115  Sum_probs=89.6

Q ss_pred             CCCCCcEEEEEeecccc--ccHHHHHHHHHhCCCceE--EEE---eCC----ccHHHHHHHHcCCCeEEecccChHHHHH
Q 016648          178 GEPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARI--AFI---GDG----PYREELEKMFTGMPAVFTGMLLGEELSQ  246 (385)
Q Consensus       178 ~~~~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l--~i~---G~g----~~~~~l~~~~~~~~i~~~g~~~~~~~~~  246 (385)
                      .+++..+.+.+|+....  +.+..+...++. .+..|  ++.   |.+    ...+.+++..++.+..+.+++|+.++  
T Consensus       249 q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~-s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~v--  325 (446)
T PLN00414        249 FEPGSVVFCAFGTQFFFEKDQFQEFCLGMEL-TGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLI--  325 (446)
T ss_pred             CCCCceEEEeecccccCCHHHHHHHHHHHHH-cCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHH--
Confidence            34456677788887543  233333333333 23333  222   111    12234555555567888899998886  


Q ss_pred             HHHhC--cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEeeCC-----CCHHHHHHHHhH
Q 016648          247 AYASG--DVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP-----GDLDDCLSKLEP  315 (385)
Q Consensus       247 ~~~~a--di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~~-----~~~~~l~~~i~~  315 (385)
                       ++.+  +++|    ..+.-++++||+++|+|+|+.+..    .....+.  +.-+.|..+..     -+.+++.+++++
T Consensus       326 -L~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~--~~~g~g~~~~~~~~~~~~~~~i~~~v~~  398 (446)
T PLN00414        326 -LSHPSVGCFV----NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLT--EELEVSVKVQREDSGWFSKESLRDTVKS  398 (446)
T ss_pred             -hcCCccceEE----ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCeEEEeccccCCccCHHHHHHHHHH
Confidence             6666  4466    345577899999999999986543    2233331  12355655531     388999999999


Q ss_pred             hhcCH-HHHHHHHHHHHHHHHh
Q 016648          316 LLYNQ-ELRETMGQAARQEMEK  336 (385)
Q Consensus       316 ll~~~-~~~~~~~~~a~~~~~~  336 (385)
                      ++.++ +..+++++++++..+.
T Consensus       399 ~m~~~~e~g~~~r~~a~~~~~~  420 (446)
T PLN00414        399 VMDKDSEIGNLVKRNHKKLKET  420 (446)
T ss_pred             HhcCChhhHHHHHHHHHHHHHH
Confidence            99764 4566677777665433

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.58  E-value=0.0099  Score=56.01  Aligned_cols=131  Identities=11%  Similarity=0.069  Sum_probs=78.1

Q ss_pred             CCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeCCc-------------c-----HHHHHHHHcCCCeEEecccC
Q 016648          181 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP-------------Y-----REELEKMFTGMPAVFTGMLL  240 (385)
Q Consensus       181 ~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~g~-------------~-----~~~l~~~~~~~~i~~~g~~~  240 (385)
                      +..+.+.+|+...  .+-+..+..+++..+. +++.+-.++             .     .+.+.+.. ..++.+.+++|
T Consensus       274 ~svvyvsfGS~~~~~~~~~~~la~~l~~~~~-~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~-~~~g~v~~W~P  351 (481)
T PLN02554        274 KSVVFLCFGSMGGFSEEQAREIAIALERSGH-RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRT-KDIGKVIGWAP  351 (481)
T ss_pred             CcEEEEeccccccCCHHHHHHHHHHHHHcCC-CeEEEEcCCcccccccccccccchhhhCChHHHHHh-ccCceEEeeCC
Confidence            4466778888633  3467788888887754 555432210             0     11222222 23567779999


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCC-cccccCCCCCeeEeeC-------------
Q 016648          241 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIP-DIIPEDQDGKIGYLFN-------------  302 (385)
Q Consensus       241 ~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~-e~~~~~~~~~~g~~~~-------------  302 (385)
                      +.++... ..+.++|    ..+.-++++||+.+|+|+|+....    ... ..+   +.-+.|..+.             
T Consensus       352 Q~~iL~H-~~v~~Fv----tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v---~~~g~Gv~l~~~~~~~~~~~~~~  423 (481)
T PLN02554        352 QVAVLAK-PAIGGFV----THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMV---EELGLAVEIRKYWRGDLLAGEME  423 (481)
T ss_pred             HHHHhCC-cccCccc----ccCccchHHHHHHcCCCEEecCccccchhhHHHHH---HHhCceEEeeccccccccccccC
Confidence            8776321 3344455    345567899999999999987543    222 222   2233454442             


Q ss_pred             CCCHHHHHHHHhHhhc-CHH
Q 016648          303 PGDLDDCLSKLEPLLY-NQE  321 (385)
Q Consensus       303 ~~~~~~l~~~i~~ll~-~~~  321 (385)
                      .-+.+++.++|++++. +++
T Consensus       424 ~~~~e~l~~av~~vm~~~~~  443 (481)
T PLN02554        424 TVTAEEIERGIRCLMEQDSD  443 (481)
T ss_pred             eEcHHHHHHHHHHHhcCCHH
Confidence            1278999999999996 543

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=97.51  E-value=0.00073  Score=53.98  Aligned_cols=91  Identities=21%  Similarity=0.285  Sum_probs=62.7

Q ss_pred             cccchHHHHHHhhccCCCEEEeCCCchhHH-HHHHHHHH-h-CCCEEEEEecCCCcccccccccccchhHHHHHHHHHHh
Q 016648           48 SLALSPRIISEVARFKPDIIHASSPGIMVF-GALIIAKL-L-CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  124 (385)
Q Consensus        48 ~~~~~~~l~~~i~~~~pDiI~~~~~~~~~~-~~~~~~~~-~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (385)
                      .....+++.+.+++.+||+|++..|..... ...+..+. . ++|++..+.|..... +.               ++...
T Consensus        74 ~~~~~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-~~---------------W~~~~  137 (169)
T PF06925_consen   74 SRLFARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-PF---------------WIHPG  137 (169)
T ss_pred             HHHHHHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-cC---------------eecCC
Confidence            444566899999999999999999855444 33232232 3 577765555542211 11               24577


Q ss_pred             CCeEEEcChhHHHHHHHhcccCCCcEEEeeC
Q 016648          125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKK  155 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~  155 (385)
                      +|..++.|+++++.+.+.| .+++++.+..-
T Consensus       138 ~D~y~Vase~~~~~l~~~G-i~~~~I~vtGi  167 (169)
T PF06925_consen  138 VDRYFVASEEVKEELIERG-IPPERIHVTGI  167 (169)
T ss_pred             CCEEEECCHHHHHHHHHcC-CChhHEEEeCc
Confidence            9999999999999999966 57888887643

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.50  E-value=0.0014  Score=60.94  Aligned_cols=142  Identities=18%  Similarity=0.198  Sum_probs=84.9

Q ss_pred             CCCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEE-EeCC----c-----cHHHHHHHHcCCCeEEecccChHHHHH
Q 016648          179 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDG----P-----YREELEKMFTGMPAVFTGMLLGEELSQ  246 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i-~G~g----~-----~~~~l~~~~~~~~i~~~g~~~~~~~~~  246 (385)
                      +++..+.+.+|+...  .+-+..+..+++..+. .|+. +..+    .     ..+.+.+... .+..+.+++|+.++  
T Consensus       262 ~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~er~~-~~g~v~~w~PQ~~i--  337 (451)
T PLN02410        262 KKNSVIFVSLGSLALMEINEVMETASGLDSSNQ-QFLWVIRPGSVRGSEWIESLPKEFSKIIS-GRGYIVKWAPQKEV--  337 (451)
T ss_pred             CCCcEEEEEccccccCCHHHHHHHHHHHHhcCC-CeEEEEccCcccccchhhcCChhHHHhcc-CCeEEEccCCHHHH--
Confidence            345677778887643  2445666777776654 3443 3311    1     1223333332 35677799998886  


Q ss_pred             HHHhCcE--EEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCC-CeeEee-CCCCHHHHHHHHhHhhc
Q 016648          247 AYASGDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLF-NPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       247 ~~~~adi--~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~-~~g~~~-~~~~~~~l~~~i~~ll~  318 (385)
                       +...++  +|    ..+.-++++||+++|+|+|+....+    ....+   .+. +.|+-+ ..-+.+++++++++++.
T Consensus       338 -L~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~v~~av~~lm~  409 (451)
T PLN02410        338 -LSHPAVGGFW----SHCGWNSTLESIGEGVPMICKPFSSDQKVNARYL---ECVWKIGIQVEGDLDRGAVERAVKRLMV  409 (451)
T ss_pred             -hCCCccCeee----ecCchhHHHHHHHcCCCEEeccccccCHHHHHHH---HHHhCeeEEeCCcccHHHHHHHHHHHHc
Confidence             666555  55    3445678999999999999865432    22322   122 455544 33478999999999998


Q ss_pred             CHHHHHHHHHHHHHH
Q 016648          319 NQELRETMGQAARQE  333 (385)
Q Consensus       319 ~~~~~~~~~~~a~~~  333 (385)
                      +++ .+++++++++.
T Consensus       410 ~~~-~~~~r~~a~~l  423 (451)
T PLN02410        410 EEE-GEEMRKRAISL  423 (451)
T ss_pred             CCc-HHHHHHHHHHH
Confidence            754 33444444443

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=97.49  E-value=0.00017  Score=61.37  Aligned_cols=90  Identities=18%  Similarity=0.128  Sum_probs=54.0

Q ss_pred             hHHHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHHh-------CCCEEEEEecCCCccc-ccc-----cccccc-----
Q 016648           52 SPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKLL-------CVPIVMSYHTHVPVYI-PRY-----TFSWLV-----  111 (385)
Q Consensus        52 ~~~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~~-------~~p~v~~~h~~~~~~~-~~~-----~~~~~~-----  111 (385)
                      .+.+...+++  .+|||||+|++.....+.++ +...       ++|+++|+|+...... +..     ......     
T Consensus       120 s~a~le~~~~l~~~pDIIH~hDW~tal~p~~l-k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~  198 (245)
T PF08323_consen  120 SRAALELLKKLGWKPDIIHCHDWHTALAPLYL-KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLD  198 (245)
T ss_dssp             HHHHHHHHCTCT-S-SEEEEECGGGTTHHHHH-HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STT
T ss_pred             HHHHHHHHHhhCCCCCEEEecCchHHHHHHHh-ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccc
Confidence            4456667776  59999999998665554443 3333       5999999998432211 100     000000     


Q ss_pred             ----hhHHHHHHHHHHhCCeEEEcChhHHHHHHHh
Q 016648          112 ----KPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  142 (385)
Q Consensus       112 ----~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~  142 (385)
                          ...-.+.+..+..||.|.++|+..++++.+.
T Consensus       199 ~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~  233 (245)
T PF08323_consen  199 EYEFYGQINFLKAGIVYADKVTTVSPTYAREIQTP  233 (245)
T ss_dssp             TTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred             ccccccccCHHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence                0001256688899999999999998887654

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.49  E-value=0.0054  Score=56.88  Aligned_cols=144  Identities=10%  Similarity=0.105  Sum_probs=81.9

Q ss_pred             CCCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCc----cHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEE
Q 016648          180 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGP----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~----~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ++..+.+.+|+.... ..+.+.+++..+....++.+=..+    ..+.+.+.....++.+.+++|+.++   ++...+..
T Consensus       263 ~~svvyvsfGS~~~~-~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~i---L~H~~v~~  338 (449)
T PLN02173        263 QGSVVYIAFGSMAKL-SSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQV---LSNKAIGC  338 (449)
T ss_pred             CCceEEEEecccccC-CHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHH---hCCCccce
Confidence            345677788876432 223333333333333343332211    1122333333457888899998775   77776444


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCCC-CeeEeeCC------CCHHHHHHHHhHhhcCHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDG-KIGYLFNP------GDLDDCLSKLEPLLYNQELRE  324 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~-~~g~~~~~------~~~~~l~~~i~~ll~~~~~~~  324 (385)
                      +-+  .+.-++++||+++|+|+|+.+.-    .+...+   .+. +.|.-+..      -+.+++.+++++++.+++ .+
T Consensus       339 Fvt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~-~~  412 (449)
T PLN02173        339 FMT--HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYI---QDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEK-SK  412 (449)
T ss_pred             EEe--cCccchHHHHHHcCCCEEecCchhcchHHHHHH---HHHhCceEEEeecccCCcccHHHHHHHHHHHhcCCh-HH
Confidence            333  35567899999999999987533    223333   221 34444321      168999999999997643 34


Q ss_pred             HHHHHHHHH
Q 016648          325 TMGQAARQE  333 (385)
Q Consensus       325 ~~~~~a~~~  333 (385)
                      ++++++++.
T Consensus       413 ~~r~~a~~~  421 (449)
T PLN02173        413 EMKENAGKW  421 (449)
T ss_pred             HHHHHHHHH
Confidence            555554444

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=97.39  E-value=0.072  Score=46.93  Aligned_cols=201  Identities=18%  Similarity=0.174  Sum_probs=109.7

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchh----------H-HHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHH
Q 016648           52 SPRIISEVARFKPDIIHASSPGIM----------V-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF  120 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~----------~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  120 (385)
                      ...+.+.+++.  |++++-+.+.+          . +....+++..|+|+++.-.+..|...         ...+...+.
T Consensus        55 ~~~~~~~l~~~--D~vI~gGG~l~~d~~~~~~~~~~~~~~~~a~~~~k~~~~~g~giGP~~~---------~~~r~~~~~  123 (298)
T TIGR03609        55 LLAVLRALRRA--DVVIWGGGSLLQDVTSFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRR---------RLSRWLVRR  123 (298)
T ss_pred             HHHHHHHHHHC--CEEEECCcccccCCcccccHHHHHHHHHHHHHcCCCEEEEecccCCcCC---------HHHHHHHHH
Confidence            34566666555  88877532111          0 11234567789999887776654321         122346677


Q ss_pred             HHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEE-Eeecc--ccccH
Q 016648          121 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH-VGRLG--VEKSL  197 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~G~~~--~~k~~  197 (385)
                      +++.+|.+.+=.+...+.+++.+.    ++.+.|..+   ..-+......     . ...++..+++ +....  ....+
T Consensus       124 ~l~~~~~i~vRD~~S~~~l~~~g~----~i~~~~D~a---~~l~~~~~~~-----~-~~~~~~~i~i~~r~~~~~~~~~~  190 (298)
T TIGR03609       124 VLRGCRAISVRDAASYRLLKRLGI----PAELAADPV---WLLPPEPWPG-----G-EPLPEPVIVVSLRPWPLLDVSRL  190 (298)
T ss_pred             HHccCCEEEEeCHHHHHHHHHhCC----CceEeCChh---hhCCCCcccc-----c-ccCCCCeEEEEECCCCcCCHHHH
Confidence            899999999988888888776543    455555322   2111100000     0 1112334443 32221  12234


Q ss_pred             HHHHHHHHhC---CCceEEEEeC--CccHHHHHHHHcCC--CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHH
Q 016648          198 DFLKRVMDRL---PEARIAFIGD--GPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  270 (385)
Q Consensus       198 ~~l~~a~~~~---~~~~l~i~G~--g~~~~~l~~~~~~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea  270 (385)
                      +.+.+++..+   .+.+++++..  ..+.+..+++....  ...+....+.+|+..++++||++|....     ..++=|
T Consensus       191 ~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl-----H~~I~A  265 (298)
T TIGR03609       191 LRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL-----HALILA  265 (298)
T ss_pred             HHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech-----HHHHHH
Confidence            5555555554   3566666552  23333333332221  1222355566899999999999884432     245669


Q ss_pred             HhcCCcEEEec
Q 016648          271 MSSGIPVVGVR  281 (385)
Q Consensus       271 ~a~G~PvI~s~  281 (385)
                      +.+|+|+|+-.
T Consensus       266 ~~~gvP~i~i~  276 (298)
T TIGR03609       266 AAAGVPFVALS  276 (298)
T ss_pred             HHcCCCEEEee
Confidence            99999999653

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PLN02167 UDP-glycosyltransferase family protein

Probab=97.34  E-value=0.0052  Score=57.77  Aligned_cols=129  Identities=16%  Similarity=0.190  Sum_probs=76.8

Q ss_pred             CCCcEEEEEeecc--ccccHHHHHHHHHhCCCceEEE-EeCCc---------cHHHHHHHHcCCCeEEecccChHHHHHH
Q 016648          180 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAF-IGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQA  247 (385)
Q Consensus       180 ~~~~~i~~~G~~~--~~k~~~~l~~a~~~~~~~~l~i-~G~g~---------~~~~l~~~~~~~~i~~~g~~~~~~~~~~  247 (385)
                      .+..+.+.+|++.  ..+.+..+..+++..+ .++++ ++...         ..+.+.+...+ +..+.+++|+.++   
T Consensus       279 ~~svvyvsfGS~~~~~~~~~~ela~~l~~~~-~~flw~~~~~~~~~~~~~~~lp~~~~er~~~-rg~v~~w~PQ~~i---  353 (475)
T PLN02167        279 ESSVVFLCFGSLGSLPAPQIKEIAQALELVG-CRFLWSIRTNPAEYASPYEPLPEGFMDRVMG-RGLVCGWAPQVEI---  353 (475)
T ss_pred             CCceEEEeecccccCCHHHHHHHHHHHHhCC-CcEEEEEecCcccccchhhhCChHHHHHhcc-CeeeeccCCHHHH---
Confidence            3456677788763  2345777777887764 35544 43211         11122222222 3466799988776   


Q ss_pred             HHhCc--EEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcc-cccCCCCCeeEeeC---------CCCHHHHHH
Q 016648          248 YASGD--VFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDI-IPEDQDGKIGYLFN---------PGDLDDCLS  311 (385)
Q Consensus       248 ~~~ad--i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~-~~~~~~~~~g~~~~---------~~~~~~l~~  311 (385)
                      ++...  ++|    ..+.-++++||+++|+|+|+-...    ..... +   +.-+.|..+.         .-+.+++++
T Consensus       354 L~h~~vg~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~---~~~g~g~~~~~~~~~~~~~~~~~~~l~~  426 (475)
T PLN02167        354 LAHKAIGGFV----SHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV---KELGLAVELRLDYVSAYGEIVKADEIAG  426 (475)
T ss_pred             hcCcccCeEE----eeCCcccHHHHHHcCCCEEeccccccchhhHHHHH---HHhCeeEEeecccccccCCcccHHHHHH
Confidence            66644  455    334456889999999999986543    22222 2   2334555442         127899999


Q ss_pred             HHhHhhcCH
Q 016648          312 KLEPLLYNQ  320 (385)
Q Consensus       312 ~i~~ll~~~  320 (385)
                      ++++++.++
T Consensus       427 av~~~m~~~  435 (475)
T PLN02167        427 AVRSLMDGE  435 (475)
T ss_pred             HHHHHhcCC
Confidence            999999754

>PLN02207 UDP-glycosyltransferase

Probab=97.33  E-value=0.025  Score=52.85  Aligned_cols=187  Identities=12%  Similarity=0.048  Sum_probs=98.5

Q ss_pred             HHhCCeEEEcChhHHHHH-HHhccc-C-CCcEEEeeCCCCCCCCCCCC-----CChhhHhhhcCCCCCCcEEEEEeeccc
Q 016648          122 HRAADLTLVPSVAIGKDL-EAARVT-A-ANKIRIWKKGVDSESFHPRF-----RSSEMRWRLSNGEPDKPLIVHVGRLGV  193 (385)
Q Consensus       122 ~~~ad~ii~~s~~~~~~~-~~~~~~-~-~~~i~vi~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~~~~  193 (385)
                      .+++|.+++.|....|.- .+.... + ..++..|..-..... .+..     ...+...=+...+++..+.+.+|+...
T Consensus       209 ~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~  287 (468)
T PLN02207        209 FTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGR  287 (468)
T ss_pred             cccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcC
Confidence            467999999998777652 222210 1 123443332211110 0110     011111112222345667777887632


Q ss_pred             --cccHHHHHHHHHhCCCceEEE-EeCCcc--H----HHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCc
Q 016648          194 --EKSLDFLKRVMDRLPEARIAF-IGDGPY--R----EELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  264 (385)
Q Consensus       194 --~k~~~~l~~a~~~~~~~~l~i-~G~g~~--~----~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~  264 (385)
                        .+-+..+..+++..+. .++. +.....  .    +.+.+... .+..+.+++|+.++   ++...+..+-  ..+.-
T Consensus       288 ~~~~q~~ela~~l~~~~~-~flW~~r~~~~~~~~~lp~~f~er~~-~~g~i~~W~PQ~~I---L~H~~vg~Fv--TH~Gw  360 (468)
T PLN02207        288 LRGPLVKEIAHGLELCQY-RFLWSLRTEEVTNDDLLPEGFLDRVS-GRGMICGWSPQVEI---LAHKAVGGFV--SHCGW  360 (468)
T ss_pred             CCHHHHHHHHHHHHHCCC-cEEEEEeCCCccccccCCHHHHhhcC-CCeEEEEeCCHHHH---hcccccceee--ecCcc
Confidence              3447778888888764 4444 332111  1    22222222 35667799999887   5555443222  33445


Q ss_pred             HHHHHHHhcCCcEEEecCC----CCCcccccCCCCCeeEee---------CCCCHHHHHHHHhHhhc
Q 016648          265 LVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLF---------NPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       265 ~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~---------~~~~~~~l~~~i~~ll~  318 (385)
                      ++++||+.+|+|+|+-...    ....++.  +.-+.|+-+         +.-+.+++.++|++++.
T Consensus       361 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        361 NSIVESLWFGVPIVTWPMYAEQQLNAFLMV--KELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             ccHHHHHHcCCCEEecCccccchhhHHHHH--HHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence            6889999999999986543    2223220  112344422         12277899999999996

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=97.28  E-value=0.0093  Score=55.43  Aligned_cols=132  Identities=14%  Similarity=0.104  Sum_probs=79.2

Q ss_pred             CCCcEEEEEeecc--ccccHHHHHHHHHhCCCceEEEEeCC---------cc------HHHHHHHHcCCCeEEecccChH
Q 016648          180 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDG---------PY------REELEKMFTGMPAVFTGMLLGE  242 (385)
Q Consensus       180 ~~~~~i~~~G~~~--~~k~~~~l~~a~~~~~~~~l~i~G~g---------~~------~~~l~~~~~~~~i~~~g~~~~~  242 (385)
                      ++..+.+.+|+..  ..+-++.+..+++..+.--+..+...         ..      .+.+.+.. ..+..+.+++|+.
T Consensus       260 ~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~-~~~g~v~~W~PQ~  338 (455)
T PLN02152        260 ESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL-EEVGMIVSWCSQI  338 (455)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhc-cCCeEEEeeCCHH
Confidence            3466777888763  34567788888888765333334321         10      01111112 2356778999887


Q ss_pred             HHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC----CCCcccccCCC-CCeeEeeC-----CCCHHHHHHH
Q 016648          243 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFN-----PGDLDDCLSK  312 (385)
Q Consensus       243 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~----~~~e~~~~~~~-~~~g~~~~-----~~~~~~l~~~  312 (385)
                      ++   ++..++..+-+  .+.-++++||+.+|+|+|+-+..    .....+   .+ -+.|+-+.     .-+.+++.++
T Consensus       339 ~i---L~h~~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~~~e~l~~a  410 (455)
T PLN02152        339 EV---LRHRAVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLL---EEIWKTGVRVRENSEGLVERGEIRRC  410 (455)
T ss_pred             HH---hCCcccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHH---HHHhCceEEeecCcCCcCcHHHHHHH
Confidence            75   77777644433  34567899999999999986542    222233   11 02333331     1278999999


Q ss_pred             HhHhhcCH
Q 016648          313 LEPLLYNQ  320 (385)
Q Consensus       313 i~~ll~~~  320 (385)
                      +.++++++
T Consensus       411 v~~vm~~~  418 (455)
T PLN02152        411 LEAVMEEK  418 (455)
T ss_pred             HHHHHhhh
Confidence            99999754

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.27  E-value=0.032  Score=49.97  Aligned_cols=95  Identities=22%  Similarity=0.385  Sum_probs=65.3

Q ss_pred             CcEEEEEe-ecccccc--HHHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCCC--eEEecccChHHHHHHHHhCcEE
Q 016648          182 KPLIVHVG-RLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVF  254 (385)
Q Consensus       182 ~~~i~~~G-~~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~~--i~~~g~~~~~~~~~~~~~adi~  254 (385)
                      +.+++..| +....|.  .+.+.+.++.+  ...+++++|+..+.+..+++....+  +.+.|..+-+|+..+++.||++
T Consensus       176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l~  255 (334)
T COG0859         176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADLV  255 (334)
T ss_pred             CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCEE
Confidence            45566777 4445555  23444444433  2378999998766666666665543  2289999989999999999999


Q ss_pred             EEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          255 VMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       255 v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      |.+..    |..-+ |.|.|+|+|+--
T Consensus       256 I~~DS----g~~Hl-AaA~~~P~I~iy  277 (334)
T COG0859         256 IGNDS----GPMHL-AAALGTPTIALY  277 (334)
T ss_pred             EccCC----hHHHH-HHHcCCCEEEEE
Confidence            96653    44444 889999999764

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.23  E-value=0.039  Score=48.56  Aligned_cols=190  Identities=17%  Similarity=0.127  Sum_probs=102.5

Q ss_pred             HhhccCCCEEEeCCCchhHHHHHHHHHHhCC--CEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhH
Q 016648           58 EVARFKPDIIHASSPGIMVFGALIIAKLLCV--PIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  135 (385)
Q Consensus        58 ~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~--p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~  135 (385)
                      .+..-.||+|+..+...... .+.+++..|.  +.|. +.+  |..                   ..+..|.||++.++ 
T Consensus        52 ~~~~~~pdLiIsaGr~t~~~-~~~l~r~~gg~~~~V~-i~~--P~~-------------------~~~~FDlvi~p~HD-  107 (311)
T PF06258_consen   52 ALEPPWPDLIISAGRRTAPA-ALALRRASGGRTKTVQ-IMD--PRL-------------------PPRPFDLVIVPEHD-  107 (311)
T ss_pred             cccCCCCcEEEECCCchHHH-HHHHHHHcCCCceEEE-EcC--CCC-------------------CccccCEEEECccc-
Confidence            34456799999998754443 4445565555  4443 333  211                   13668999998876 


Q ss_pred             HHHHHHhcccCCCcEEEee---CCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccc--cHH---HHHHHHHhC
Q 016648          136 GKDLEAARVTAANKIRIWK---KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK--SLD---FLKRVMDRL  207 (385)
Q Consensus       136 ~~~~~~~~~~~~~~i~vi~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k--~~~---~l~~a~~~~  207 (385)
                             ......++....   |.++.+.....  ......++. ..+.+.+.+.+|.-+...  +.+   .+++.+..+
T Consensus       108 -------~~~~~~Nvl~t~ga~~~i~~~~l~~a--~~~~~~~~~-~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~  177 (311)
T PF06258_consen  108 -------RLPRGPNVLPTLGAPNRITPERLAEA--AAAWAPRLA-ALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAAL  177 (311)
T ss_pred             -------CcCCCCceEecccCCCcCCHHHHHHH--HHhhhhhhc-cCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHH
Confidence                   111223443322   22222211110  000111111 233455677788543322  222   333333222


Q ss_pred             ---CCceEEEEeCCccHH----HHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 ---PEARIAFIGDGPYRE----ELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ---~~~~l~i~G~g~~~~----~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                         .+..+.|..+....+    .+.+..+. ..+.+...-+..-+..+|+.||.++++.-   .-..+.||++.|+||..
T Consensus       178 ~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v  254 (311)
T PF06258_consen  178 AAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTED---SVSMVSEAAATGKPVYV  254 (311)
T ss_pred             HHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEE
Confidence               347888888654333    33333322 24645555555568899999999997743   23458899999999998


Q ss_pred             ecCCC
Q 016648          280 VRAGG  284 (385)
Q Consensus       280 s~~~~  284 (385)
                      -..++
T Consensus       255 ~~l~~  259 (311)
T PF06258_consen  255 LPLPG  259 (311)
T ss_pred             ecCCC
Confidence            77665

The function of this family is unknown.

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.15  E-value=0.013  Score=49.97  Aligned_cols=97  Identities=18%  Similarity=0.232  Sum_probs=59.6

Q ss_pred             CCCcEEEEEeeccccccH--HHHHHHHHhCC--CceEEEEeCCcc--HHHHHHHHcCC---CeEEecccChHHHHHHHHh
Q 016648          180 PDKPLIVHVGRLGVEKSL--DFLKRVMDRLP--EARIAFIGDGPY--REELEKMFTGM---PAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~k~~--~~l~~a~~~~~--~~~l~i~G~g~~--~~~l~~~~~~~---~i~~~g~~~~~~~~~~~~~  250 (385)
                      ++..+++..|.-.+.|.+  +.+.++++.+.  ...++++|.+.+  .+.........   .+.+.|..+-.|+..+++.
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~  183 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISR  183 (247)
T ss_dssp             TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHT
T ss_pred             cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhc
Confidence            445677778877677764  34666666653  367888887766  33333444332   4778888888999999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      ||++|.+-.    |. +-=|.+.|+|+|+--
T Consensus       184 a~~~I~~Dt----g~-~HlA~a~~~p~v~lf  209 (247)
T PF01075_consen  184 ADLVIGNDT----GP-MHLAAALGTPTVALF  209 (247)
T ss_dssp             SSEEEEESS----HH-HHHHHHTT--EEEEE
T ss_pred             CCEEEecCC----hH-HHHHHHHhCCEEEEe
Confidence            999997653    33 334899999999863

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.13  E-value=0.12  Score=43.14  Aligned_cols=191  Identities=16%  Similarity=0.126  Sum_probs=104.2

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  140 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~  140 (385)
                      +..||+++..+-....+ .+.+++..+.+.++.+.+.  ..                   =.+..|.||++-.+..+...
T Consensus        68 ~~~Pdl~I~aGrrta~l-~~~lkk~~~~~~vVqI~~P--rl-------------------p~~~fDlvivp~HD~~~~~s  125 (329)
T COG3660          68 EQRPDLIITAGRRTAPL-AFYLKKKFGGIKVVQIQDP--RL-------------------PYNHFDLVIVPYHDWREELS  125 (329)
T ss_pred             cCCCceEEecccchhHH-HHHHHHhcCCceEEEeeCC--CC-------------------CcccceEEeccchhhhhhhh
Confidence            45699999988654444 3445566665666655552  11                   13557889988877776643


Q ss_pred             HhcccCCCcEEEeeCCCCCCCCCCCC-CChhhHhhhcCCCCCCcEEEEEeeccccccH-----HHHHHHH-HhC--CCce
Q 016648          141 AARVTAANKIRIWKKGVDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL-----DFLKRVM-DRL--PEAR  211 (385)
Q Consensus       141 ~~~~~~~~~i~vi~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~-----~~l~~a~-~~~--~~~~  211 (385)
                      ..+    .++..+ +|..-..-+... ...+..+.+ ......++-+++|.-.+.-.+     ..+..++ +.+  ....
T Consensus       126 ~~~----~Nilpi-~Gs~h~Vt~~~lAa~~e~~~~~-~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~  199 (329)
T COG3660         126 DQG----PNILPI-NGSPHNVTSQRLAALREAFKHL-LPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGS  199 (329)
T ss_pred             ccC----Cceeec-cCCCCcccHHHhhhhHHHHHhh-CCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCce
Confidence            322    244333 233221111111 111111222 234567788889876443322     2222222 222  3567


Q ss_pred             EEEEeCCccHHHHHHHHcCC----CeEEeccc--ChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          212 IAFIGDGPYREELEKMFTGM----PAVFTGML--LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       212 l~i~G~g~~~~~l~~~~~~~----~i~~~g~~--~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                      +++.-+....+.++..++..    .+.+-..-  ...-...+|+.||.+|...-.   =+...||.+.|+||-+-.-
T Consensus       200 ~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~  273 (329)
T COG3660         200 FLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFILEP  273 (329)
T ss_pred             EEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence            77766655556666665542    23333222  224577889999999976432   2335799999999986543

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=97.12  E-value=0.038  Score=48.16  Aligned_cols=81  Identities=23%  Similarity=0.242  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHh
Q 016648          197 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  272 (385)
Q Consensus       197 ~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a  272 (385)
                      +..+++.+..- +.+++++|...+.+..++....    ..+.+.|..+-.|+..+++.||++|.+..    |..-+ |.+
T Consensus       142 ~~~l~~~l~~~-~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Ds----g~~Hl-A~a  215 (279)
T cd03789         142 FAALADRLLAR-GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDS----GPMHL-AAA  215 (279)
T ss_pred             HHHHHHHHHHC-CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCC----HHHHH-HHH
Confidence            44444444433 7899999977666655554432    22556777777999999999999997642    44444 579


Q ss_pred             cCCcEEEecCC
Q 016648          273 SGIPVVGVRAG  283 (385)
Q Consensus       273 ~G~PvI~s~~~  283 (385)
                      +|+|+|+--.+
T Consensus       216 ~~~p~i~l~g~  226 (279)
T cd03789         216 LGTPTVALFGP  226 (279)
T ss_pred             cCCCEEEEECC
Confidence            99999976433

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN03015 UDP-glucosyl transferase

Probab=97.12  E-value=0.081  Score=49.39  Aligned_cols=147  Identities=14%  Similarity=0.087  Sum_probs=83.3

Q ss_pred             CCCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeC-C-----------c-----cHHHHHHHHcCCCeEEeccc
Q 016648          179 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGD-G-----------P-----YREELEKMFTGMPAVFTGML  239 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~-g-----------~-----~~~~l~~~~~~~~i~~~g~~  239 (385)
                      +++..+.+.+|+...  ..-+..+..+++..+. .|+.+=. .           .     ..+.+.+..++.++.+.+++
T Consensus       265 ~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~  343 (470)
T PLN03015        265 GERSVVYVCLGSGGTLTFEQTVELAWGLELSGQ-RFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWA  343 (470)
T ss_pred             CCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCC-cEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecC
Confidence            345666777787733  3446777777877754 4443321 0           0     11223333344457888999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeC------CCCHHHH
Q 016648          240 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN------PGDLDDC  309 (385)
Q Consensus       240 ~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~------~~~~~~l  309 (385)
                      |+.++   ++...+..+-  ..+.-++++||+++|+|+|+.+.-+    ....+.  +.-..|.-+.      .-+.+++
T Consensus       344 PQ~~v---L~h~~vg~fv--tH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~--~~~gvg~~~~~~~~~~~v~~e~i  416 (470)
T PLN03015        344 PQVEI---LSHRSIGGFL--SHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT--EEIGVAVRTSELPSEKVIGREEV  416 (470)
T ss_pred             CHHHH---hccCccCeEE--ecCCchhHHHHHHcCCCEEecccccchHHHHHHHH--HHhCeeEEecccccCCccCHHHH
Confidence            98887   4454443322  2344568999999999999875422    112120  1223444332      2378899


Q ss_pred             HHHHhHhhcC-HHHHHHHHHHHHHH
Q 016648          310 LSKLEPLLYN-QELRETMGQAARQE  333 (385)
Q Consensus       310 ~~~i~~ll~~-~~~~~~~~~~a~~~  333 (385)
                      .++++++++. .++-+++++++++.
T Consensus       417 ~~~v~~lm~~~~eeg~~~R~ra~~l  441 (470)
T PLN03015        417 ASLVRKIVAEEDEEGQKIRAKAEEV  441 (470)
T ss_pred             HHHHHHHHccCcccHHHHHHHHHHH
Confidence            9999999952 12234444444443

>PLN02555 limonoid glucosyltransferase

Probab=97.00  E-value=0.024  Score=53.18  Aligned_cols=142  Identities=17%  Similarity=0.101  Sum_probs=82.4

Q ss_pred             CCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEE-eCC-----c----cHHHHHHHHcCCCeEEecccChHHHHHHH
Q 016648          181 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDG-----P----YREELEKMFTGMPAVFTGMLLGEELSQAY  248 (385)
Q Consensus       181 ~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~-G~g-----~----~~~~l~~~~~~~~i~~~g~~~~~~~~~~~  248 (385)
                      ...+.+.+|++..  .+-+..+..+++..+ .+++.+ ...     .    ..+.+.+.. ..++.+.+++|+.++... 
T Consensus       277 ~sVvyvsfGS~~~~~~~q~~ela~~l~~~~-~~flW~~~~~~~~~~~~~~~lp~~~~~~~-~~~g~v~~W~PQ~~iL~H-  353 (480)
T PLN02555        277 SSVVYISFGTVVYLKQEQIDEIAYGVLNSG-VSFLWVMRPPHKDSGVEPHVLPEEFLEKA-GDKGKIVQWCPQEKVLAH-  353 (480)
T ss_pred             CceeEEEeccccCCCHHHHHHHHHHHHhcC-CeEEEEEecCcccccchhhcCChhhhhhc-CCceEEEecCCHHHHhCC-
Confidence            3456777887632  344666667776654 465544 311     0    111122211 236777899988776322 


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCC-CeeEeeC-------CCCHHHHHHHHhHh
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLFN-------PGDLDDCLSKLEPL  316 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~-~~g~~~~-------~~~~~~l~~~i~~l  316 (385)
                      ..+.++|    ..+.-++++||+.+|+|+|+...-+    ....+   .+. +.|+-+.       .-+.+++.++++++
T Consensus       354 ~~v~~Fv----tH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~---~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~v  426 (480)
T PLN02555        354 PSVACFV----THCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYL---VDVFKTGVRLCRGEAENKLITREEVAECLLEA  426 (480)
T ss_pred             CccCeEE----ecCCcchHHHHHHcCCCEEeCCCccccHHHHHHH---HHHhCceEEccCCccccCcCcHHHHHHHHHHH
Confidence            3455566    3455678999999999999875432    22222   222 4454441       12688999999999


Q ss_pred             hcCHHHHHHHHHHHHHH
Q 016648          317 LYNQELRETMGQAARQE  333 (385)
Q Consensus       317 l~~~~~~~~~~~~a~~~  333 (385)
                      +.+++ .++++++|++.
T Consensus       427 m~~~~-g~~~r~ra~~l  442 (480)
T PLN02555        427 TVGEK-AAELKQNALKW  442 (480)
T ss_pred             hcCch-HHHHHHHHHHH
Confidence            97643 34555555554

>PLN02534 UDP-glycosyltransferase

Probab=96.99  E-value=0.047  Score=51.32  Aligned_cols=147  Identities=16%  Similarity=0.143  Sum_probs=82.4

Q ss_pred             CCCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEE-EeCC---cc------HHHHHHHHcCCCeEEecccChHHHHH
Q 016648          179 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDG---PY------REELEKMFTGMPAVFTGMLLGEELSQ  246 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i-~G~g---~~------~~~l~~~~~~~~i~~~g~~~~~~~~~  246 (385)
                      ++...+.+.+|+...  .+-+..+..+++.... .|+. +..+   ..      .+.+.+.....++.+.|++|+.++  
T Consensus       281 ~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~-~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~i--  357 (491)
T PLN02534        281 KPRSVIYACLGSLCRLVPSQLIELGLGLEASKK-PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLI--  357 (491)
T ss_pred             CCCceEEEEecccccCCHHHHHHHHHHHHhCCC-CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHH--
Confidence            334667777887642  2335555677777654 4333 3321   11      122233334457888899998664  


Q ss_pred             HHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeC---------------CCCHH
Q 016648          247 AYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN---------------PGDLD  307 (385)
Q Consensus       247 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~---------------~~~~~  307 (385)
                       +...++..+-  ..+..++++||+++|+|+|+-...+    ....+.  +.-+.|+-+.               .-+.+
T Consensus       358 -L~h~~v~~fv--tH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~--e~~~vGv~~~~~~~~~~~~~~~~~~~v~~e  432 (491)
T PLN02534        358 -LSHPAIGGFL--THCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIV--EVLRIGVRVGVEVPVRWGDEERVGVLVKKD  432 (491)
T ss_pred             -hcCCccceEE--ecCccHHHHHHHHcCCCEEeccccccHHHHHHHHH--HhhcceEEecccccccccccccccCccCHH
Confidence             6677773332  3455779999999999999875432    111110  1111222110               12688


Q ss_pred             HHHHHHhHhhcC-HHHHHHHHHHHHHH
Q 016648          308 DCLSKLEPLLYN-QELRETMGQAARQE  333 (385)
Q Consensus       308 ~l~~~i~~ll~~-~~~~~~~~~~a~~~  333 (385)
                      ++++++++++.+ .++-+++++++.+.
T Consensus       433 ev~~~v~~~m~~~~eeg~~~R~rA~el  459 (491)
T PLN02534        433 EVEKAVKTLMDDGGEEGERRRRRAQEL  459 (491)
T ss_pred             HHHHHHHHHhccccccHHHHHHHHHHH
Confidence            999999999962 22234444444443

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=96.91  E-value=0.072  Score=47.81  Aligned_cols=98  Identities=15%  Similarity=0.175  Sum_probs=63.7

Q ss_pred             CCcEEEEEee-cccccc--HHHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCC--C-eEEecccChHHHHHHHHhCc
Q 016648          181 DKPLIVHVGR-LGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM--P-AVFTGMLLGEELSQAYASGD  252 (385)
Q Consensus       181 ~~~~i~~~G~-~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~--~-i~~~g~~~~~~~~~~~~~ad  252 (385)
                      ++.+++..|. ..+.|.  .+.+.++++.+  .+.+++++|...+.+..++.....  + +.+.|..+-.++..+++.||
T Consensus       174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~  253 (334)
T TIGR02195       174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAK  253 (334)
T ss_pred             CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCC
Confidence            3455666665 334554  33555555444  468899999776665555543322  2 34678888899999999999


Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ++|....    |..= =|.|.|+|+|+--.+
T Consensus       254 l~I~~DS----Gp~H-lAaA~~~P~i~lfG~  279 (334)
T TIGR02195       254 AVVTNDS----GLMH-VAAALNRPLVALYGS  279 (334)
T ss_pred             EEEeeCC----HHHH-HHHHcCCCEEEEECC
Confidence            9996542    3333 388999999975333

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=96.87  E-value=0.19  Score=43.56  Aligned_cols=97  Identities=20%  Similarity=0.185  Sum_probs=59.9

Q ss_pred             CCCcEEEEEeecccc----------c-cHHHHHHHHHhCCCceEEEEeCC-----ccHHHHHHHHcCCCeEEecccChHH
Q 016648          180 PDKPLIVHVGRLGVE----------K-SLDFLKRVMDRLPEARIAFIGDG-----PYREELEKMFTGMPAVFTGMLLGEE  243 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~----------k-~~~~l~~a~~~~~~~~l~i~G~g-----~~~~~l~~~~~~~~i~~~g~~~~~~  243 (385)
                      .++..+++......+          . -.+.+.++++..|+.++++--..     .....+.+.....++.+...  ..+
T Consensus       115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  192 (269)
T PF05159_consen  115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDD--DVN  192 (269)
T ss_pred             CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECC--CCC
Confidence            455666776665433          1 23344445555678887765422     12233344333334444322  257


Q ss_pred             HHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          244 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       244 ~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      +.+++..||.++.-+     +++-+||+.+|+||++-..+
T Consensus       193 ~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  193 LYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             HHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence            889999999998655     77899999999999986543

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=96.83  E-value=0.0038  Score=49.23  Aligned_cols=96  Identities=17%  Similarity=0.183  Sum_probs=58.7

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCc------ccccc----cccccchhHHHHHHHHHHhCCeEEEc
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV------YIPRY----TFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      +.||||+.|......  ..+..-..++|++...--++..      +.+..    ......+..+...-..+..||..+++
T Consensus        65 f~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isP  142 (171)
T PF12000_consen   65 FVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISP  142 (171)
T ss_pred             CCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCC
Confidence            578999999753222  2233334588887643221111      11111    11111111223345567889999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCC
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESF  162 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~  162 (385)
                      |.+.+..+...+   .++|.||..|||++.+
T Consensus       143 T~wQ~~~fP~~~---r~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  143 TRWQRSQFPAEF---RSKISVIHDGIDTDRF  170 (171)
T ss_pred             CHHHHHhCCHHH---HcCcEEeecccchhhc
Confidence            999999987775   3699999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=96.77  E-value=0.4  Score=43.34  Aligned_cols=97  Identities=15%  Similarity=0.147  Sum_probs=62.6

Q ss_pred             CCcEEEEEeec-ccccc--HHHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCC------C-eEEecccChHHHHHHH
Q 016648          181 DKPLIVHVGRL-GVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQAY  248 (385)
Q Consensus       181 ~~~~i~~~G~~-~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~------~-i~~~g~~~~~~~~~~~  248 (385)
                      +..+++..|.- .+.|.  .+.+.++++.+  .+.+++++|...+.+..++.....      + +.+.|..+-.++..++
T Consensus       180 ~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali  259 (348)
T PRK10916        180 RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILI  259 (348)
T ss_pred             CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHH
Confidence            34556666653 34454  33444544443  468899999766665555443321      1 4567877779999999


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                      +.||++|..-.    |..= =|.|.|+|+|+--.
T Consensus       260 ~~a~l~I~nDT----Gp~H-lAaA~g~P~valfG  288 (348)
T PRK10916        260 AACKAIVTNDS----GLMH-VAAALNRPLVALYG  288 (348)
T ss_pred             HhCCEEEecCC----hHHH-HHHHhCCCEEEEEC
Confidence            99999996542    3333 38999999997533

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=96.68  E-value=0.0073  Score=56.07  Aligned_cols=149  Identities=13%  Similarity=0.116  Sum_probs=96.2

Q ss_pred             cEEEEEee-ccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC-C
Q 016648          183 PLIVHVGR-LGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-S  260 (385)
Q Consensus       183 ~~i~~~G~-~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~  260 (385)
                      ..-+..|. -..++|-+..++++.+.-+++-.+.+.......+-     .-|.-+|.++.+|+..+++.+.++|-... .
T Consensus       278 ~~AlVyGK~~~~w~~k~~~l~~l~~~~eih~tV~~~~~~~~~~P-----~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~  352 (559)
T PF15024_consen  278 NQALVYGKERYMWKGKEKYLDVLHKYMEIHGTVYDEPQRPPNVP-----SFVKNHGILSGDEFQQLLRKAKVFIGLGFPY  352 (559)
T ss_pred             ceeEEEccchhhhcCcHHHHHHHHhhcEEEEEeccCCCCCcccc-----hhhhhcCcCCHHHHHHHHHhhhEeeecCCCC
Confidence            34444453 34467888888888776444444433222111111     13778999999999999999999994332 2


Q ss_pred             CCCcHHHHHHHhcCCcEEEecCCCC---------------Cccccc------CCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          261 ETLGLVVLEAMSSGIPVVGVRAGGI---------------PDIIPE------DQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       261 e~~~~~~~Ea~a~G~PvI~s~~~~~---------------~e~~~~------~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      |  |-+.+||++.|+|.|-......               +++-..      .-..-.-+.++.+|.+++.++|.+++.+
T Consensus       353 E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~  430 (559)
T PF15024_consen  353 E--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILAT  430 (559)
T ss_pred             C--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhc
Confidence            2  5678999999999986543211               111100      0112245778888999999999999876


Q ss_pred             HHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 016648          320 QELRETMGQAARQEM-EKYDWRAATRTIR  347 (385)
Q Consensus       320 ~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  347 (385)
                      +-         .-++ -+|+.+.+.+++.
T Consensus       431 ~v---------~Py~P~efT~egmLeRv~  450 (559)
T PF15024_consen  431 PV---------EPYLPYEFTCEGMLERVN  450 (559)
T ss_pred             CC---------CCcCCcccCHHHHHHHHH
Confidence            42         2344 4689999998884

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=96.49  E-value=0.16  Score=44.69  Aligned_cols=250  Identities=14%  Similarity=0.112  Sum_probs=143.2

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHH----------HHhCCeEEEcC
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL----------HRAADLTLVPS  132 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ad~ii~~s  132 (385)
                      +.||++=-+.....- -....+..|.++|....+......              .+..+          -...|.|++.-
T Consensus        73 ~lDVlIEmg~ql~~~-~~~~~~~~G~KvV~y~~GndYv~~--------------~E~~lF~k~~~~~f~~~~yD~VW~lP  137 (364)
T PF10933_consen   73 ELDVLIEMGAQLDPE-WLDYMRARGGKVVSYRCGNDYVMD--------------IESMLFNKPSGHLFNGAPYDEVWTLP  137 (364)
T ss_pred             cCCEEEEccCccCHH-HHHHHHHcCCeEEEEeCCchHHHH--------------hhHHhcCCCCCccCCCCCCceeEecc
Confidence            669998876533222 223446789999987777421111              11111          24578888765


Q ss_pred             hhHH---HHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhh-HhhhcCCC--CCCcEEEEEeecccccc---HHHHHH-
Q 016648          133 VAIG---KDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM-RWRLSNGE--PDKPLIVHVGRLGVEKS---LDFLKR-  202 (385)
Q Consensus       133 ~~~~---~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~-~~~~~~~~--~~~~~i~~~G~~~~~k~---~~~l~~-  202 (385)
                      +...   .++...   ...++.++|.--++.+++......+. ..+....+  +...+-+|=-++.-.|.   ..++.+ 
T Consensus       138 q~~~~~~~yl~~l---~r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~  214 (364)
T PF10933_consen  138 QFENTCAPYLETL---HRCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEE  214 (364)
T ss_pred             chhhhchHHHHHH---hcCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHH
Confidence            5333   233333   34577888875554443221111000 00111111  12222333334444555   233344 


Q ss_pred             HHHhCCC-ceEEEEeCC---ccHHHHHHHHc------CCCeEEecccChHHHHHHHHh-CcEEEEcCCCCCCcHHHHHHH
Q 016648          203 VMDRLPE-ARIAFIGDG---PYREELEKMFT------GMPAVFTGMLLGEELSQAYAS-GDVFVMPSESETLGLVVLEAM  271 (385)
Q Consensus       203 a~~~~~~-~~l~i~G~g---~~~~~l~~~~~------~~~i~~~g~~~~~~~~~~~~~-adi~v~ps~~e~~~~~~~Ea~  271 (385)
                      +.+.-|+ +..+.+.+.   .+.+.+...+.      .....|.|..   +++.+|++ .|++|.--...+..-.-+|++
T Consensus       215 aYR~~P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHqWeN~lNYlY~daL  291 (364)
T PF10933_consen  215 AYRADPDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQWENPLNYLYYDAL  291 (364)
T ss_pred             HHHhChhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEeccccchhhHHHHHHH
Confidence            4444454 344444422   12233333333      2246777775   55666655 689887666667788899999


Q ss_pred             hcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCCHHHHH
Q 016648          272 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAAT  343 (385)
Q Consensus       272 a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~  343 (385)
                      .-|=|.|-     ...++     ++.|+.++..|..+=++++.+++. .+...+...+++++.+..++..+-+
T Consensus       292 yggYPLVH-----NS~~l-----~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~  354 (364)
T PF10933_consen  292 YGGYPLVH-----NSPLL-----KDVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPA  354 (364)
T ss_pred             hcCCCccc-----Ccchh-----cccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHH
Confidence            99999996     35566     448999999999999999999887 4456788889999998776655443

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=96.41  E-value=0.012  Score=50.49  Aligned_cols=81  Identities=15%  Similarity=0.023  Sum_probs=59.4

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccc------------ccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI------------PRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      +.||+|+.+.+..++.+.+.+.+.|+|+++|-|+.+....            .......+.+.+..+-+..+..||.|++
T Consensus       172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~~  251 (268)
T PF11997_consen  172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRITP  251 (268)
T ss_pred             CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeecc
Confidence            6699999998888888999999999999999999654311            1112233344455667888999999999


Q ss_pred             cChhHHHHHHHhc
Q 016648          131 PSVAIGKDLEAAR  143 (385)
Q Consensus       131 ~s~~~~~~~~~~~  143 (385)
                      .++...+.-.+.|
T Consensus       252 l~~~n~~~q~~~G  264 (268)
T PF11997_consen  252 LYEYNREWQIELG  264 (268)
T ss_pred             cchhhHHHHHHhC
Confidence            9997555444433

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=96.35  E-value=0.52  Score=40.63  Aligned_cols=181  Identities=14%  Similarity=0.170  Sum_probs=94.2

Q ss_pred             HHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCC
Q 016648           77 FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG  156 (385)
Q Consensus        77 ~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~  156 (385)
                      +.....++..++|+++.-.+..|         ......+...+.++++++.+.+=.+...+.+.+.+. +. ++.+.|..
T Consensus        89 ~~~~~~~~~~~~pv~~~g~g~gp---------~~~~~~~~~~~~~l~~~~~i~vRD~~S~~~l~~~g~-~~-~~~~~~D~  157 (286)
T PF04230_consen   89 LRWLFLAKKLGKPVIILGQGIGP---------FRSEEFKKLLRRILSKADYISVRDEYSYELLKKLGI-SG-NVKLVPDP  157 (286)
T ss_pred             HHHHHHHHhcCCCeEEECceECc---------cCCHHHHHHHHHHHhCCCEEEECCHHHHHHHHHcCC-CC-CcEEEeCc
Confidence            33445667789999886555422         112223346777888999988877777775666543 33 77777755


Q ss_pred             CCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeec---cccccHHHHHHHHHhC--CC--ceEEEEeCC--ccH-HHHHH
Q 016648          157 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL---GVEKSLDFLKRVMDRL--PE--ARIAFIGDG--PYR-EELEK  226 (385)
Q Consensus       157 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~---~~~k~~~~l~~a~~~~--~~--~~l~i~G~g--~~~-~~l~~  226 (385)
                      +-  ...+......       ..........+...   ....-.+.+.+.+..+  ..  ..+......  ... .....
T Consensus       158 af--~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (286)
T PF04230_consen  158 AF--LLPPSYPDED-------KSKPKRNYISVSNSPSRNNEEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNE  228 (286)
T ss_pred             hh--hcCccccccc-------ccccccceeeeccccchhhhhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHh
Confidence            42  1111111000       00001112222221   1222234444444443  22  222223321  111 11111


Q ss_pred             H---H-cCC-CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          227 M---F-TGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       227 ~---~-~~~-~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                      .   . ... ........+.+++..++++||++|....    -. .+=|+++|+|+|+-+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl----H~-~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  229 IDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL----HG-AILALSLGVPVIAISY  284 (286)
T ss_pred             hhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC----HH-HHHHHHcCCCEEEEec
Confidence            1   1 111 2455666777999999999999995543    33 4459999999998653

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins

Probab=96.33  E-value=0.0077  Score=40.85  Aligned_cols=67  Identities=16%  Similarity=0.251  Sum_probs=49.1

Q ss_pred             ccccccCCCCccc-----ccccccchHHHHHHhhccCCCEEEeCCC-chhHHHHHHHHHHhCCCEEEEEecCC
Q 016648           32 HHIYSFPCPWYQK-----VPLSLALSPRIISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHV   98 (385)
Q Consensus        32 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~i~~~~pDiI~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~   98 (385)
                      .|.+.+.+|...-     +|--+....-++.++.+++.||||.|.. ..+...+++.++..|.+.|+|-|..+
T Consensus        14 ngLKVYYlP~~~~~~~~t~Pt~~~~~pl~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf   86 (90)
T PF08288_consen   14 NGLKVYYLPLKVFYNQCTLPTLFGSFPLLRNILIRERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF   86 (90)
T ss_pred             CCeEEEeecchhhhcCcchHHHHHhhHHHHHHHHHcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence            4555555554432     2333445667888889999999999986 55667788888999999999988854

These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=96.18  E-value=0.038  Score=44.73  Aligned_cols=97  Identities=13%  Similarity=0.117  Sum_probs=51.6

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+.++..+||++++.....+.- .+..++..|+|+++.---..+.....      .+.+..+.+.+++..|.|.+
T Consensus        83 ~~~~~~rfl~~~~P~~~i~~EtElWPn-ll~~a~~~~ip~~LvNarls~~s~~~------~~~~~~~~r~~l~~f~~i~a  155 (186)
T PF04413_consen   83 FPWAVRRFLDHWRPDLLIWVETELWPN-LLREAKRRGIPVVLVNARLSERSFRR------YRRFPFLFRPLLSRFDRILA  155 (186)
T ss_dssp             SHHHHHHHHHHH--SEEEEES----HH-HHHH-----S-EEEEEE--------------------HHHHHHGGG-SEEEE
T ss_pred             CHHHHHHHHHHhCCCEEEEEccccCHH-HHHHHhhcCCCEEEEeeeeccccchh------hhhhHHHHHHHHHhCCEEEE
Confidence            356788999999999999987543332 23456778999987433322211111      11223477889999999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeC
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKK  155 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~  155 (385)
                      .|+...+.+.+.+. +++++.+..|
T Consensus       156 qs~~da~r~~~lG~-~~~~v~v~Gn  179 (186)
T PF04413_consen  156 QSEADAERFRKLGA-PPERVHVTGN  179 (186)
T ss_dssp             SSHHHHHHHHTTT--S--SEEE---
T ss_pred             CCHHHHHHHHHcCC-CcceEEEeCc
Confidence            99999999999876 6678988876

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.16  E-value=0.08  Score=51.42  Aligned_cols=122  Identities=20%  Similarity=0.233  Sum_probs=87.8

Q ss_pred             CCCcEEEEEeeccccccHHHHHHHH----HhC-----CCceEEEEeCCc----cHHHHHHHH----c----CCCeEEecc
Q 016648          180 PDKPLIVHVGRLGVEKSLDFLKRVM----DRL-----PEARIAFIGDGP----YREELEKMF----T----GMPAVFTGM  238 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~k~~~~l~~a~----~~~-----~~~~l~i~G~g~----~~~~l~~~~----~----~~~i~~~g~  238 (385)
                      ++...++++-|+...|...+.+.-+    ..+     |.+.+++.|...    ..+.+.+++    .    ..+|.|+..
T Consensus       485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~n  564 (750)
T COG0058         485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPN  564 (750)
T ss_pred             CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCC
Confidence            4577899999999999866543222    222     335556667321    112222222    1    246888888


Q ss_pred             cChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCC--CCCeeEeeCCC
Q 016648          239 LLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ--DGKIGYLFNPG  304 (385)
Q Consensus       239 ~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~--~~~~g~~~~~~  304 (385)
                      .+-.-...++..||+-...|.  .|+.|++=+-++.-|.+-|+|-.|...|..   +  .+.||+++...
T Consensus       565 YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~---e~vg~~N~~~fG~~  631 (750)
T COG0058         565 YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIY---EHVGGENGWIFGET  631 (750)
T ss_pred             CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHH---HhcCCCceEEeCCc
Confidence            876777788999999888765  689999999999999999999999999888   5  78899998753

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=96.03  E-value=0.64  Score=41.91  Aligned_cols=96  Identities=13%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             CCcEEEEEeecccccc--HHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHc---CCC-eEEecccChHHHHHHHHh
Q 016648          181 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFT---GMP-AVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~---~~~-i~~~g~~~~~~~~~~~~~  250 (385)
                      +..+++..|.-.+.|.  .+.+.++++.+  .+.+++++|.+.  +.+..++...   ..+ +.+.|..+-.|+..+++.
T Consensus       181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~  260 (344)
T TIGR02201       181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDH  260 (344)
T ss_pred             CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHh
Confidence            3455666665544444  34444444443  468899998643  2222333322   222 447888888999999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      ||++|....    |. +-=|.|+|+|+|+--
T Consensus       261 a~l~Vs~DS----Gp-~HlAaA~g~p~v~Lf  286 (344)
T TIGR02201       261 ARLFIGVDS----VP-MHMAAALGTPLVALF  286 (344)
T ss_pred             CCEEEecCC----HH-HHHHHHcCCCEEEEE
Confidence            999996642    33 333899999999753

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=96.00  E-value=0.58  Score=42.70  Aligned_cols=222  Identities=9%  Similarity=0.094  Sum_probs=118.9

Q ss_pred             HHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhH--hhhcCCCCCCcEEEEEeeccccc---
Q 016648          121 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEK---  195 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~~k---  195 (385)
                      ...+.|.+.+.+......+.+.++....++.....+-....+..........  ......+.++.+|+|.-++....   
T Consensus       145 ~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~  224 (388)
T COG1887         145 VRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLI  224 (388)
T ss_pred             eeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCcccc
Confidence            4566788888888888887777776666666555444332332222222111  11122345688999988876654   


Q ss_pred             c---H--HHHHHHHHh-CC-CceEEEEeCCcc-HHHHHHHHcCCCeEEecccC-hHHHHHHHHhCcEEEEcCCCCCCcHH
Q 016648          196 S---L--DFLKRVMDR-LP-EARIAFIGDGPY-REELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLV  266 (385)
Q Consensus       196 ~---~--~~l~~a~~~-~~-~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~-~~~~~~~~~~adi~v~ps~~e~~~~~  266 (385)
                      +   .  ..-+..+.+ +. +--.+|+-..+. ............  +.-.++ ..++.++|..+|++|.-     ++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~~~~ii~k~Hp~is~~~~~~~~~~~--~~~~vs~~~di~dll~~sDiLITD-----ySSv  297 (388)
T COG1887         225 GTQFFNLDIDIEKLKEKLGENEYVIIVKPHPLISDKIDKRYALDD--FVLDVSDNADINDLLLVSDILITD-----YSSV  297 (388)
T ss_pred             chhhhhhhhhHHHHHHhhccCCeEEEEecChhhhhhhhhhhhccc--eeEecccchhHHHHHhhhCEEEee-----chHH
Confidence            2   2  222233332 22 333333332222 122221111112  222222 38999999999999943     4789


Q ss_pred             HHHHHhcCCcEEEe--cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHH
Q 016648          267 VLEAMSSGIPVVGV--RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  341 (385)
Q Consensus       267 ~~Ea~a~G~PvI~s--~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~  341 (385)
                      ..|+|...+|||--  |....   ..+..+......|-++.  +.+++.++|.....+.+...+..+...+....+.-.+
T Consensus       298 ~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~  375 (388)
T COG1887         298 IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGR  375 (388)
T ss_pred             HHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhccccccc
Confidence            99999999999954  32211   11110002233455555  8899999999988755443333333333333343355


Q ss_pred             HHHHHHHHHH
Q 016648          342 ATRTIRNEQY  351 (385)
Q Consensus       342 ~~~~~~~~iy  351 (385)
                      ..+++.+.++
T Consensus       376 ss~ri~~~i~  385 (388)
T COG1887         376 SSERILKLIF  385 (388)
T ss_pred             HHHHHHHHHh
Confidence            5555554333

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=95.81  E-value=0.38  Score=42.85  Aligned_cols=97  Identities=16%  Similarity=0.139  Sum_probs=61.7

Q ss_pred             CCCcEEEEEeeccccccH--HHHHHHHHhC--CCceEEEEeCCc-cHHHHHHHHcCC-CeEEecccChHHHHHHHHhCcE
Q 016648          180 PDKPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFIGDGP-YREELEKMFTGM-PAVFTGMLLGEELSQAYASGDV  253 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~k~~--~~l~~a~~~~--~~~~l~i~G~g~-~~~~l~~~~~~~-~i~~~g~~~~~~~~~~~~~adi  253 (385)
                      +++.+++..|.-...|.+  +.+.++++.+  .+.+++++|+++ +.+..++..... +..+.|..+-.++..+++.||+
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a~l  257 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGADA  257 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcCCE
Confidence            345566777765555553  4555555544  367888875444 333344433322 3456788888999999999999


Q ss_pred             EEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          254 FVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       254 ~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +|....    |..= =|.++|+|+|+--
T Consensus       258 ~I~~DS----gp~H-lAaa~g~P~i~lf  280 (319)
T TIGR02193       258 VVGVDT----GLTH-LAAALDKPTVTLY  280 (319)
T ss_pred             EEeCCC----hHHH-HHHHcCCCEEEEE
Confidence            996542    3333 3778999999753

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=95.80  E-value=0.094  Score=46.26  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=52.1

Q ss_pred             HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC-CcEEEecCC--CCCcccccCCCCCeeEeeCCCCHHHHHHHHh
Q 016648          242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG--GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE  314 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G-~PvI~s~~~--~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~  314 (385)
                      .+..+.|++|.+++.|.....+...++|||++| +|||.++.-  ...+.+   .-....+.++..+..++.+.++
T Consensus       228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l---dw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL---DWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc---CHHHEEEEECHHHHHHHHHHHh
Confidence            568899999999999887777889999999999 588876532  445566   4566677777666655555544

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=95.76  E-value=0.24  Score=47.22  Aligned_cols=144  Identities=15%  Similarity=0.136  Sum_probs=82.6

Q ss_pred             CcEEEEEeecc-----ccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHc---CCCeEEecccChHHHHHHHHhCcE
Q 016648          182 KPLIVHVGRLG-----VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDV  253 (385)
Q Consensus       182 ~~~i~~~G~~~-----~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~---~~~i~~~g~~~~~~~~~~~~~adi  253 (385)
                      ..+++.+|+..     +.+-...+..+++..+++.++..=.+.....+.+...   ..+|...+++|+.++.  +....+
T Consensus       278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll--l~H~~v  355 (496)
T KOG1192|consen  278 SVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL--LDHPAV  355 (496)
T ss_pred             CeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh--cCCCcC
Confidence            56666778774     2345677888888887777666554332222222221   3368888999998876  333223


Q ss_pred             EEEcCCCCCCcHHHHHHHhcCCcEEEec----CCCCCcccccCCCCCeeEeeCC-CCHHHHHHHHhHhhcCHHHHHHHHH
Q 016648          254 FVMPSESETLGLVVLEAMSSGIPVVGVR----AGGIPDIIPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETMGQ  328 (385)
Q Consensus       254 ~v~ps~~e~~~~~~~Ea~a~G~PvI~s~----~~~~~e~~~~~~~~~~g~~~~~-~~~~~l~~~i~~ll~~~~~~~~~~~  328 (385)
                      ..+-+ .-|++ +++|++.+|+|+|+.+    ..-....+.  +.+..+..... .+...+.+++..++++++..+...+
T Consensus       356 ~~FvT-HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~--~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~~~  431 (496)
T KOG1192|consen  356 GGFVT-HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLV--RHGGGGVLDKRDLVSEELLEAIKEILENEEYKEAAKR  431 (496)
T ss_pred             cEEEE-CCccc-HHHHHHhcCCceecCCccccchhHHHHHH--hCCCEEEEehhhcCcHHHHHHHHHHHcChHHHHHHHH
Confidence            22222 23344 4599999999999543    222333331  34455544432 1233378888888888765444433


Q ss_pred             HHH
Q 016648          329 AAR  331 (385)
Q Consensus       329 ~a~  331 (385)
                      -+.
T Consensus       432 l~~  434 (496)
T KOG1192|consen  432 LSE  434 (496)
T ss_pred             HHH
Confidence            333

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=95.66  E-value=0.53  Score=41.98  Aligned_cols=97  Identities=14%  Similarity=0.132  Sum_probs=60.1

Q ss_pred             CcEEEEEeecccccc--HHHHHHHHHhC--CCceEEEE-eCCccHHHHHHHHcCC-CeEEecccChHHHHHHHHhCcEEE
Q 016648          182 KPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       182 ~~~i~~~G~~~~~k~--~~~l~~a~~~~--~~~~l~i~-G~g~~~~~l~~~~~~~-~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      +.+++..|.-...|.  .+.+.++++.+  .+.++++. |...+.+..++..... ++.+.|..+-.|+..+++.||++|
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I  258 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVV  258 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEE
Confidence            344444554333343  33445555444  36778776 5444444444444332 466778888899999999999999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ....    |..= =|.|+|+|+|+--.+
T Consensus       259 ~nDS----Gp~H-lA~A~g~p~valfGp  281 (322)
T PRK10964        259 SVDT----GLSH-LTAALDRPNITLYGP  281 (322)
T ss_pred             ecCC----cHHH-HHHHhCCCEEEEECC
Confidence            6542    3333 389999999975433

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.59  E-value=0.14  Score=49.64  Aligned_cols=186  Identities=17%  Similarity=0.176  Sum_probs=103.5

Q ss_pred             HHhCCeEEEcChhHHHHHHHh-----cccCCCcEEEeeCCCCCCCCCCCCC-----------------------------
Q 016648          122 HRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESFHPRFR-----------------------------  167 (385)
Q Consensus       122 ~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~vi~~~v~~~~~~~~~~-----------------------------  167 (385)
                      +..+..+=.+|.-..+.+++.     +...+.++.-+.|||....+-....                             
T Consensus       329 l~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~  408 (713)
T PF00343_consen  329 LRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFA  408 (713)
T ss_dssp             HHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGC
T ss_pred             HHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhh
Confidence            444566777887777766543     2334568999999998876531100                             


Q ss_pred             -ChhhH-------------------hhhc-CCCCCCcEEEEEeeccccccHHH-HHHHH---Hh---CC-----CceEEE
Q 016648          168 -SSEMR-------------------WRLS-NGEPDKPLIVHVGRLGVEKSLDF-LKRVM---DR---LP-----EARIAF  214 (385)
Q Consensus       168 -~~~~~-------------------~~~~-~~~~~~~~i~~~G~~~~~k~~~~-l~~a~---~~---~~-----~~~l~i  214 (385)
                       .....                   .+.. ...++....+++-|+...|...+ ++..+   .+   .|     ...+++
T Consensus       409 dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IF  488 (713)
T PF00343_consen  409 DDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIF  488 (713)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEE
Confidence             00000                   0001 12346677889999999998776 33322   22   22     366888


Q ss_pred             EeCC-c-c--HHHHHHHH-------cC-------CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcC
Q 016648          215 IGDG-P-Y--REELEKMF-------TG-------MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSG  274 (385)
Q Consensus       215 ~G~g-~-~--~~~l~~~~-------~~-------~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G  274 (385)
                      .|.. | +  .+.+-+++       ..       .+|.|+....-.-...++..||+-+..++  .|+.|++-+-++.-|
T Consensus       489 aGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NG  568 (713)
T PF00343_consen  489 AGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNG  568 (713)
T ss_dssp             E----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT
T ss_pred             eccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCC
Confidence            8842 1 1  11222221       11       14888888877777889999999998766  699999999999999


Q ss_pred             CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHH
Q 016648          275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  309 (385)
Q Consensus       275 ~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l  309 (385)
                      .+.+++-.|...|+.+.. ..++.+++.. +.+++
T Consensus       569 aL~lstlDG~niEi~e~v-G~eN~fiFG~-~~~ev  601 (713)
T PF00343_consen  569 ALNLSTLDGWNIEIAEAV-GEENIFIFGL-TAEEV  601 (713)
T ss_dssp             -EEEEESSTCHHHHHHHH--GGGSEEES--BHHHH
T ss_pred             CeEEecccchhHHHHHhc-CCCcEEEcCC-CHHHH
Confidence            999999999988887321 2356777753 44444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.46  E-value=0.13  Score=50.65  Aligned_cols=128  Identities=17%  Similarity=0.207  Sum_probs=90.8

Q ss_pred             CCCCcEEEEEeeccccccHHH-HHHHHHhC------C-----CceEEEEeCCc-c---HHHHHHHH----c---C-----
Q 016648          179 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDGP-Y---REELEKMF----T---G-----  230 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~k~~~~-l~~a~~~~------~-----~~~l~i~G~g~-~---~~~l~~~~----~---~-----  230 (385)
                      .++....+++-|+...|...+ ++..+..+      |     ...+++.|... .   .+.+-+++    .   .     
T Consensus       527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  606 (797)
T cd04300         527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVG  606 (797)
T ss_pred             CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcC
Confidence            456788899999999999887 65554332      3     25677777321 1   11121111    1   1     


Q ss_pred             --CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCC--CCeeEeeCCC
Q 016648          231 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPG  304 (385)
Q Consensus       231 --~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~--~~~g~~~~~~  304 (385)
                        .+|.|+....-.-...++..||+-...|.  .|+.|++=+-+|.-|.+.++|-.|...|+.   ++  ++|++++.. 
T Consensus       607 ~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~---e~vG~eN~fiFG~-  682 (797)
T cd04300         607 DKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIA---EEVGEENIFIFGL-  682 (797)
T ss_pred             CceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHH---HHhCcCcEEEeCC-
Confidence              15888888776777889999999988766  689999999999999999999999998888   44  678888864 


Q ss_pred             CHHHHH
Q 016648          305 DLDDCL  310 (385)
Q Consensus       305 ~~~~l~  310 (385)
                      +++++.
T Consensus       683 ~~~ev~  688 (797)
T cd04300         683 TAEEVE  688 (797)
T ss_pred             CHHHHH
Confidence            444443

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14986 glycogen phosphorylase; Provisional

Probab=95.39  E-value=0.13  Score=50.56  Aligned_cols=130  Identities=15%  Similarity=0.208  Sum_probs=93.7

Q ss_pred             CCCCcEEEEEeeccccccHHH-HHHHHHhC------C-----CceEEEEeCCc---c-HHHHHHH----Hc---C-----
Q 016648          179 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDGP---Y-REELEKM----FT---G-----  230 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~k~~~~-l~~a~~~~------~-----~~~l~i~G~g~---~-~~~l~~~----~~---~-----  230 (385)
                      .++...++++-|+...|...+ ++..+..+      |     ...+++.|...   . .+.+-++    ..   .     
T Consensus       540 dp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~  619 (815)
T PRK14986        540 NPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIG  619 (815)
T ss_pred             CcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhc
Confidence            346677888999999999877 55554332      2     35677777421   1 1111111    11   1     


Q ss_pred             --CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCC--CCeeEeeCCC
Q 016648          231 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPG  304 (385)
Q Consensus       231 --~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~--~~~g~~~~~~  304 (385)
                        .+|.|+....-.-...++..||+-...|+  .|+.|++=+-+|.-|.+.+++-.|...|+.   ++  ++||+.+.. 
T Consensus       620 ~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~---e~vG~eN~~~fG~-  695 (815)
T PRK14986        620 DKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML---EHVGEENIFIFGN-  695 (815)
T ss_pred             CceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHH---HhcCCCcEEEeCC-
Confidence              15888888776777889999999998766  689999999999999999999999999988   54  789999864 


Q ss_pred             CHHHHHHH
Q 016648          305 DLDDCLSK  312 (385)
Q Consensus       305 ~~~~l~~~  312 (385)
                      +++++.+.
T Consensus       696 ~~~ev~~~  703 (815)
T PRK14986        696 TAEEVEAL  703 (815)
T ss_pred             CHHHHHHH
Confidence            66666554

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=95.12  E-value=0.87  Score=41.20  Aligned_cols=98  Identities=11%  Similarity=0.097  Sum_probs=62.0

Q ss_pred             CCcEEEEEeecccccc--HHHHHHHHHhC--CCceEEEEeCCcc--HHHHHHHHc---CC-CeEEecccChHHHHHHHHh
Q 016648          181 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFT---GM-PAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~--~~~l~~~~~---~~-~i~~~g~~~~~~~~~~~~~  250 (385)
                      ++.+++..|.-.+.|.  .+.+.++++.+  .+.+++++|...+  .+..++...   .. .+.+.|..+-.++..+++.
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~  262 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH  262 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence            4566677776555554  33455555444  3678888875432  222233332   12 2557888888999999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ||++|....    |..= =|.|+|+|+|+--.+
T Consensus       263 a~l~v~nDS----Gp~H-lAaA~g~P~v~lfGp  290 (352)
T PRK10422        263 AQLFIGVDS----APAH-IAAAVNTPLICLFGA  290 (352)
T ss_pred             CCEEEecCC----HHHH-HHHHcCCCEEEEECC
Confidence            999996542    3333 378999999975433

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=95.12  E-value=0.1  Score=51.16  Aligned_cols=127  Identities=16%  Similarity=0.168  Sum_probs=89.0

Q ss_pred             CCCCcEEEEEeeccccccHHH-HHHHHHhC------C-----CceEEEEeCCc-c---HHHHHHH----H---cC-----
Q 016648          179 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDGP-Y---REELEKM----F---TG-----  230 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~k~~~~-l~~a~~~~------~-----~~~l~i~G~g~-~---~~~l~~~----~---~~-----  230 (385)
                      .++....+++-|+...|...+ ++..+..+      |     ...+++.|... .   .+.+-++    .   ..     
T Consensus       526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  605 (798)
T PRK14985        526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG  605 (798)
T ss_pred             CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence            345667788889999999777 55443322      3     25677777421 1   1111111    1   11     


Q ss_pred             --CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCC--CCeeEeeCCC
Q 016648          231 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPG  304 (385)
Q Consensus       231 --~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~--~~~g~~~~~~  304 (385)
                        .+|.|+....-.-...++..||+-...|.  .|+.|++=+-+|.-|.+.++|-.|...|+.   ++  ++||+.+.. 
T Consensus       606 ~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~---e~vG~eN~f~fG~-  681 (798)
T PRK14985        606 DKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIA---EQVGEENIFIFGH-  681 (798)
T ss_pred             CceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHH---HHhCcCcEEEeCC-
Confidence              15888888776777889999999988766  689999999999999999999999988887   43  678888864 


Q ss_pred             CHHHH
Q 016648          305 DLDDC  309 (385)
Q Consensus       305 ~~~~l  309 (385)
                      +++++
T Consensus       682 ~~~ev  686 (798)
T PRK14985        682 TVEQV  686 (798)
T ss_pred             CHHHH
Confidence            44433

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=95.10  E-value=0.057  Score=42.89  Aligned_cols=75  Identities=24%  Similarity=0.254  Sum_probs=48.5

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHh------CCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhC
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLL------CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA  125 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~------~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  125 (385)
                      ......++.+.+||+|++++++.. ++..++++..      |.++|+. -.+......+           ..-+.++..+
T Consensus        81 ~~~~~~il~r~rPdvii~nGpg~~-vp~~~~~~l~~~~~~~~~kiIyI-ES~aRv~~lS-----------lTGklly~~a  147 (170)
T PF08660_consen   81 FLQSLRILRRERPDVIISNGPGTC-VPVCLAAKLLRLLGLRGSKIIYI-ESFARVKTLS-----------LTGKLLYPFA  147 (170)
T ss_pred             HHHHHHHHHHhCCCEEEEcCCcee-eHHHHHHHHHHHhhccCCcEEEE-EeeeecCCCc-----------hHHHHHHHhC
Confidence            345556778889999999998543 3344456666      8888873 2211111111           1235567789


Q ss_pred             CeEEEcChhHHHHH
Q 016648          126 DLTLVPSVAIGKDL  139 (385)
Q Consensus       126 d~ii~~s~~~~~~~  139 (385)
                      |.+++.-+++++.+
T Consensus       148 D~f~VQW~~l~~~y  161 (170)
T PF08660_consen  148 DRFIVQWEELAEKY  161 (170)
T ss_pred             CEEEEcCHHHHhHC
Confidence            99999999888775

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=94.95  E-value=0.15  Score=50.12  Aligned_cols=128  Identities=18%  Similarity=0.201  Sum_probs=90.3

Q ss_pred             CCCCcEEEEEeeccccccHHH-HHHHHHhC------C-----CceEEEEeCCc---c-HHHHHHH----H---cC-----
Q 016648          179 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDGP---Y-REELEKM----F---TG-----  230 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~k~~~~-l~~a~~~~------~-----~~~l~i~G~g~---~-~~~l~~~----~---~~-----  230 (385)
                      .++....+++-|+...|...+ ++..+..+      |     ...+++.|...   . .+.+-++    .   ..     
T Consensus       524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~  603 (794)
T TIGR02093       524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVG  603 (794)
T ss_pred             CccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhC
Confidence            346677888999999999877 65554332      2     34677777421   1 1122121    1   11     


Q ss_pred             --CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCC--CCeeEeeCCC
Q 016648          231 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPG  304 (385)
Q Consensus       231 --~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~--~~~g~~~~~~  304 (385)
                        .+|.|+....-.-...++..||+-...|.  .|+.|++=+-+|.-|.+.++|-.|...|+.   ++  ++|++++.. 
T Consensus       604 ~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~---e~vG~eN~fiFG~-  679 (794)
T TIGR02093       604 DKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIR---EEVGAENIFIFGL-  679 (794)
T ss_pred             CceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHH---HHhCcccEEEcCC-
Confidence              15888888776777889999999988766  689999999999999999999999988888   44  678888764 


Q ss_pred             CHHHHH
Q 016648          305 DLDDCL  310 (385)
Q Consensus       305 ~~~~l~  310 (385)
                      +++++.
T Consensus       680 ~~~ev~  685 (794)
T TIGR02093       680 TVEEVE  685 (794)
T ss_pred             CHHHHH
Confidence            444443

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=94.94  E-value=0.2  Score=38.01  Aligned_cols=90  Identities=21%  Similarity=0.331  Sum_probs=56.8

Q ss_pred             cEEEEEeeccccccHHHHHHH---------HHhCCCceEEE-EeCC-ccHH-HHHHHHcCCCeEEecccChHHHHHHHHh
Q 016648          183 PLIVHVGRLGVEKSLDFLKRV---------MDRLPEARIAF-IGDG-PYRE-ELEKMFTGMPAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       183 ~~i~~~G~~~~~k~~~~l~~a---------~~~~~~~~l~i-~G~g-~~~~-~l~~~~~~~~i~~~g~~~~~~~~~~~~~  250 (385)
                      ..++.+|.-.    .+.++.+         +.+..=.+++| +|.| ...+ ......+..++.+.++--..++.+.++.
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~   80 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRS   80 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhh
Confidence            4678888764    4444433         33333346666 7766 2211 2222212335556565555889999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEe
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s  280 (385)
                      ||++|    ..+...+.+|.+..|+|.|+-
T Consensus        81 AdlVI----sHAGaGS~letL~l~KPlivV  106 (170)
T KOG3349|consen   81 ADLVI----SHAGAGSCLETLRLGKPLIVV  106 (170)
T ss_pred             ccEEE----ecCCcchHHHHHHcCCCEEEE
Confidence            99999    455577899999999999864

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=94.64  E-value=0.63  Score=44.04  Aligned_cols=178  Identities=12%  Similarity=0.185  Sum_probs=116.8

Q ss_pred             CCCCcEEEEEeecccc--ccHHHHHHHHHhCCCceEEEEe-----CCccHHHHHHHHcC-CCeEEecccChHHHHHHHHh
Q 016648          179 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIG-----DGPYREELEKMFTG-MPAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l~i~G-----~g~~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~  250 (385)
                      +++.+++..+..+..-  +-++...+++++.|+-.+.+.-     +......++++..+ .+|+|..-...+|-..-.+-
T Consensus       756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~L  835 (966)
T KOG4626|consen  756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQL  835 (966)
T ss_pred             CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhh
Confidence            4455666666655332  4567778888888987776644     32333344444333 36888888888888888999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC--CCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHH
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  328 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~--~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  328 (385)
                      +|+.+-+....| -++-+|.+.+|+|+|+-....+..-+...  ..-+.|-++ ..+.++..+.--++-.|.+..+.++.
T Consensus       836 aDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-ak~~eEY~~iaV~Latd~~~L~~lr~  913 (966)
T KOG4626|consen  836 ADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-AKNREEYVQIAVRLATDKEYLKKLRA  913 (966)
T ss_pred             hhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-hhhHHHHHHHHHHhhcCHHHHHHHHH
Confidence            999986555444 34567999999999986543222111000  111122222 34888999988899899998888888


Q ss_pred             HHHHHH-H--hCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          329 AARQEM-E--KYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       329 ~a~~~~-~--~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      .-++.. .  -|+-.+.+..+. .+|.+.-+..-
T Consensus       914 ~l~~~r~~splfd~~q~~~~LE-~~y~~MW~~y~  946 (966)
T KOG4626|consen  914 KLRKARASSPLFDTKQYAKGLE-RLYLQMWKKYC  946 (966)
T ss_pred             HHHHHhcCCCccCchHHHHHHH-HHHHHHHHHhc
Confidence            777764 3  399999999996 68887755443

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=94.28  E-value=4  Score=36.88  Aligned_cols=236  Identities=13%  Similarity=0.156  Sum_probs=119.5

Q ss_pred             CCCEEEeCCC----------chhHHHH-HHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           63 KPDIIHASSP----------GIMVFGA-LIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        63 ~pDiI~~~~~----------~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      +.|+++..+.          ..+.+.. +.++...++|+++.-|+..|...         ...+++....++.+..+++=
T Consensus        89 ~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp~~~~g~svGP~~~---------~~s~~~~~~~~~~~s~i~vR  159 (385)
T COG2327          89 KADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKPTFFFGQSVGPLKH---------PLSRQLLNYVLGGCSAISVR  159 (385)
T ss_pred             hCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCCEEEEeccCCCccC---------HHHHHHHHHHhcCCcEEEEe
Confidence            6788877532          1122222 55677889999998888765432         23344677888999999998


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccc--------cHHHHHHH
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK--------SLDFLKRV  203 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k--------~~~~l~~a  203 (385)
                      .+...+.++..+.    +.....   |+.+.-+........ . ......+...+.+-.+.+..        ....+++-
T Consensus       160 D~~S~~llk~~gi----~a~l~~---D~Af~L~~~~~~~~~-~-~~~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~  230 (385)
T COG2327         160 DPVSYELLKQLGI----NARLVT---DPAFLLPASSQNATA-S-DVEAREKTVAITLRGLHPDNTAQRSILKYVNEALDL  230 (385)
T ss_pred             cHHhHHHHHHcCC----CeEeec---Ccceecccccccccc-c-ccccccceEEEEecccCCchhhhHHHHHHHHHHHHH
Confidence            8888888886553    222222   332221111110000 0 00111233333333333322        22333333


Q ss_pred             HHhCCC----ceEEEEeCCccHHH---HHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC
Q 016648          204 MDRLPE----ARIAFIGDGPYREE---LEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  275 (385)
Q Consensus       204 ~~~~~~----~~l~i~G~g~~~~~---l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~  275 (385)
                      ++....    ++++-.+...+..-   +...... .++.+..--..+++...+++||+.|..-    +- +++=|++.|+
T Consensus       231 ~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R----~H-saI~al~~g~  305 (385)
T COG2327         231 VERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMR----LH-SAIMALAFGV  305 (385)
T ss_pred             HHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeeh----hH-HHHHHHhcCC
Confidence            322222    22223333333322   2222222 2455444332467788999999998332    23 3555999999


Q ss_pred             cEEEecCC-CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHH
Q 016648          276 PVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE  321 (385)
Q Consensus       276 PvI~s~~~-~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~  321 (385)
                      |+|+-... -...+.....-.....-..+.+.+.+.+...+.+.+.+
T Consensus       306 p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~  352 (385)
T COG2327         306 PAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLD  352 (385)
T ss_pred             CeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccH
Confidence            99986533 12222210011112223345577888888777766433

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=93.59  E-value=0.2  Score=35.64  Aligned_cols=76  Identities=14%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             EEEEeC-CccHHHHHHHHcCCC--eEEe---cccChHH--HHHHHHhCcEEEEcCCCCC---CcHHHHHHHhcCCcEEEe
Q 016648          212 IAFIGD-GPYREELEKMFTGMP--AVFT---GMLLGEE--LSQAYASGDVFVMPSESET---LGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       212 l~i~G~-g~~~~~l~~~~~~~~--i~~~---g~~~~~~--~~~~~~~adi~v~ps~~e~---~~~~~~Ea~a~G~PvI~s  280 (385)
                      ++|+|. ......+++..++.+  ..++   +.....+  ++..+..+|++|++...-+   .-..--+|-..|+|++.+
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~   81 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYS   81 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEE
Confidence            567775 345556666666554  3334   3333334  8999999999998876432   233445677889999988


Q ss_pred             cCCCCCc
Q 016648          281 RAGGIPD  287 (385)
Q Consensus       281 ~~~~~~e  287 (385)
                      +..+...
T Consensus        82 ~~~~~~~   88 (97)
T PF10087_consen   82 RSRGVSS   88 (97)
T ss_pred             CCCCHHH
Confidence            7555443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=91.68  E-value=11  Score=34.70  Aligned_cols=140  Identities=17%  Similarity=0.186  Sum_probs=71.7

Q ss_pred             CCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCC
Q 016648          181 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  260 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~  260 (385)
                      ....++.+|.-   +-.....+.+..-.-.++.|++..  .+..++++.+.+   ...++.+++...+..+|+++..+..
T Consensus       177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT--~erA~~La~~~~---~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRT--LERAEELAKKLG---AEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCC--HHHHHHHHHHhC---CeeecHHHHHHhhhhCCEEEEecCC
Confidence            34456666632   223444444444333456666643  344455555544   3345559999999999999986542


Q ss_pred             --CCCcHHHH-HHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          261 --ETLGLVVL-EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       261 --e~~~~~~~-Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                        .-.+...+ +++.--...+.-|.+-.+++-+...+-.+.++++   .|++......   |...+++...++...+
T Consensus       249 ~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~~---iDDL~~iv~~---n~~~R~~~~~~ae~iI  319 (414)
T COG0373         249 PHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLYT---IDDLEEIVEE---NLEARKEEAAKAEAII  319 (414)
T ss_pred             CccccCHHHHHHHHhcccCeEEEEecCCCCCCccccCcCCeEEEe---hhhHHHHHHH---hHHHHHHHHHHHHHHH
Confidence              22333333 4444444456667766555542111122345554   4444444433   2333444444444443

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=91.23  E-value=2.8  Score=32.75  Aligned_cols=85  Identities=15%  Similarity=0.047  Sum_probs=51.8

Q ss_pred             HHHhhccCCCEEEeCCCchhH-HHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChh
Q 016648           56 ISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        56 ~~~i~~~~pDiI~~~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      .++.....+|+|++.+.-... +.++ .....++|.++.+|+..-.+........-. -+....-...-.||.|++.|..
T Consensus        52 ~~~~~~~~~dll~aTsmldLa~l~gL-~p~l~~~p~ilYFHENQl~YP~~~~~~rd~-~~~~~ni~saLaAD~v~FNS~~  129 (168)
T PF12038_consen   52 QQIPLSHSYDLLFATSMLDLATLRGL-RPDLANVPKILYFHENQLAYPVSPGQERDF-QYGMNNIYSALAADRVVFNSAF  129 (168)
T ss_pred             hccccccCCCEEEeeccccHHHHHhh-ccCCCCCCEEEEEecCcccCCCCCCccccc-cHHHHHHHHHHhceeeeecchh
Confidence            456666788999999863222 2222 224568999999999654443222111110 1112233445679999999999


Q ss_pred             HHHHHHHh
Q 016648          135 IGKDLEAA  142 (385)
Q Consensus       135 ~~~~~~~~  142 (385)
                      -.+.+.+.
T Consensus       130 nr~sFL~~  137 (168)
T PF12038_consen  130 NRDSFLDG  137 (168)
T ss_pred             hHHHHHHH
Confidence            98887654

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=90.13  E-value=0.73  Score=42.64  Aligned_cols=75  Identities=15%  Similarity=-0.007  Sum_probs=42.4

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc-----cccchhHH--HHHHHHHHhCCeEEEcChh
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF-----SWLVKPMW--LVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~ad~ii~~s~~  134 (385)
                      .+||+||.|.. ...+.+.+++...|+|...+-|...-.-......     .-..+...  ..+...++.||.||+.+..
T Consensus       400 ~~PdlI~GnYs-DgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~Q  478 (550)
T PF00862_consen  400 GKPDLIIGNYS-DGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQ  478 (550)
T ss_dssp             S--SEEEEEHH-HHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHH
T ss_pred             CCCcEEEeccC-cchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchH
Confidence            58999999975 3445566788999999999999853211110000     11111111  2346678999999998765


Q ss_pred             HHH
Q 016648          135 IGK  137 (385)
Q Consensus       135 ~~~  137 (385)
                      ...
T Consensus       479 EI~  481 (550)
T PF00862_consen  479 EIA  481 (550)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            444

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=89.71  E-value=0.4  Score=35.93  Aligned_cols=86  Identities=13%  Similarity=0.074  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhCCCceEEEEeCCcc----HHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHh
Q 016648          197 LDFLKRVMDRLPEARIAFIGDGPY----REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  272 (385)
Q Consensus       197 ~~~l~~a~~~~~~~~l~i~G~g~~----~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a  272 (385)
                      -..+.+++.+.+++++.-.-+...    .+.+......   .-.|..-.+++.+++..+|++|--|..+..-..+-.++.
T Consensus        13 G~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~---~~~~~~v~~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~   89 (124)
T PF01113_consen   13 GRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGI---GPLGVPVTDDLEELLEEADVVIDFTNPDAVYDNLEYALK   89 (124)
T ss_dssp             HHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTS---ST-SSBEBS-HHHHTTH-SEEEEES-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCc---CCcccccchhHHHhcccCCEEEEcCChHHhHHHHHHHHh
Confidence            345666776667766655442221    1111111111   111222226788889889999987765555556677888


Q ss_pred             cCCcEEEecCCCC
Q 016648          273 SGIPVVGVRAGGI  285 (385)
Q Consensus       273 ~G~PvI~s~~~~~  285 (385)
                      +|+|+|+...|..
T Consensus        90 ~g~~~ViGTTG~~  102 (124)
T PF01113_consen   90 HGVPLVIGTTGFS  102 (124)
T ss_dssp             HT-EEEEE-SSSH
T ss_pred             CCCCEEEECCCCC
Confidence            9999998766653

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR03646 YtoQ_fam YtoQ family protein

Probab=89.50  E-value=1.9  Score=31.89  Aligned_cols=70  Identities=10%  Similarity=0.059  Sum_probs=39.1

Q ss_pred             HHHHHHhCcEEEEcC--CCCCCcHH--HHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHh
Q 016648          244 LSQAYASGDVFVMPS--ESETLGLV--VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL  316 (385)
Q Consensus       244 ~~~~~~~adi~v~ps--~~e~~~~~--~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~l  316 (385)
                      ...++..||++|.--  .+..+...  .--|.++|+|.|+-.-+....-+   ++-.+.-..-..++++.++.+..+
T Consensus        69 T~~li~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpL---KEvdaaA~avaetp~Qvv~iL~Yv  142 (144)
T TIGR03646        69 TRKLIEKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIHPL---KEVDNKAQAVVETPEQAIETLKYI  142 (144)
T ss_pred             HHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccH---HHHhHHHHHHhcCHHHHHHHHHHh
Confidence            457899999988642  12222222  23478899999987655444444   222222222234666666666544

Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=88.40  E-value=2.5  Score=31.26  Aligned_cols=71  Identities=13%  Similarity=0.120  Sum_probs=41.7

Q ss_pred             HHHHHHhCcEEEEcC--CCCCCcHH--HHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh
Q 016648          244 LSQAYASGDVFVMPS--ESETLGLV--VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  317 (385)
Q Consensus       244 ~~~~~~~adi~v~ps--~~e~~~~~--~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll  317 (385)
                      ...++..||++|.--  .+..+...  .--|.++|+|.|+-.-.....-+   ++-.+.-..-..++++.++.+..++
T Consensus        66 T~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpL---KEvda~A~a~~et~~Qvv~iL~Yv~  140 (141)
T PF11071_consen   66 TRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPL---KEVDAAALAVAETPEQVVEILRYVL  140 (141)
T ss_pred             HHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccH---HHHhHhhHhhhCCHHHHHHHHHHHh
Confidence            457899999988542  12222222  23478899999987655544444   2222222333447777777776554

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=88.24  E-value=3  Score=37.61  Aligned_cols=120  Identities=9%  Similarity=-0.007  Sum_probs=63.4

Q ss_pred             EEeeccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC--CCC-C
Q 016648          187 HVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE--SET-L  263 (385)
Q Consensus       187 ~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~-~  263 (385)
                      ++++-....+-..+++.+.+.  +.+...|...               -....+.++..++++...+++..-.  .++ .
T Consensus       181 ~~Snc~~~~~R~~~~~~L~~~--~~vd~yG~c~---------------~~~~~~~~~~~~~~~~ykF~lafENs~c~dYi  243 (349)
T PF00852_consen  181 IVSNCNPHSGREEYVRELSKY--IPVDSYGKCG---------------NNNPCPRDCKLELLSKYKFYLAFENSNCPDYI  243 (349)
T ss_dssp             --S-S--H-HHHHHHHHHHTT--S-EEE-SSTT-----------------SSS--S-HHHHHHTEEEEEEE-SS--TT--
T ss_pred             EeeCcCCcccHHHHHHHHHhh--cCeEccCCCC---------------CCCCcccccccccccCcEEEEEecCCCCCCCC
Confidence            334434333344455555554  5566677540               0001222457788888888887533  333 3


Q ss_pred             cHHHHHHHhcCCcEEEec--CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHH
Q 016648          264 GLVVLEAMSSGIPVVGVR--AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  326 (385)
Q Consensus       264 ~~~~~Ea~a~G~PvI~s~--~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~  326 (385)
                      .-++.+|+..|+-.|.-.  .+.+.++++   .+.--.+-+..++++|++.|..+.+|++++.+.
T Consensus       244 TEK~~~al~~g~VPI~~G~~~~~~~~~~P---~~SfI~~~df~s~~~La~yl~~l~~n~~~Y~~y  305 (349)
T PF00852_consen  244 TEKFWNALLAGTVPIYWGPPRPNYEEFAP---PNSFIHVDDFKSPKELADYLKYLDKNDELYNKY  305 (349)
T ss_dssp             -HHHHHHHHTTSEEEEES---TTHHHHS----GGGSEEGGGSSSHHHHHHHHHHHHT-HHHHH--
T ss_pred             CHHHHHHHHCCeEEEEECCEecccccCCC---CCCccchhcCCCHHHHHHHHHHHhcCHHHHhhh
Confidence            568999999996555444  556666662   222222334558999999999999999887654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.

>PF12996 DUF3880: DUF based on E

Probab=87.67  E-value=1.4  Score=29.87  Aligned_cols=64  Identities=14%  Similarity=0.091  Sum_probs=48.0

Q ss_pred             HHHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecc
Q 016648          120 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  192 (385)
Q Consensus       120 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  192 (385)
                      .+...+|.|++......+.+++.+.   .++..+|-++++..+.+.......      ...-.--|.|+|+.-
T Consensus        14 ~i~~~~~~iFt~D~~~~~~~~~~G~---~~V~yLPLAa~~~~~~p~~~~~~~------~~~~~~dIsFVG~~y   77 (79)
T PF12996_consen   14 SIANSYDYIFTFDRSFVEEYRNLGA---ENVFYLPLAANPERFRPIPVDPEE------RKKYECDISFVGSLY   77 (79)
T ss_pred             hhCCCCCEEEEECHHHHHHHHHcCC---CCEEEccccCCHHHhCcccCCccc------ccccCCCEEEeCcCc
Confidence            4578899999999999999999753   589999999999988876442110      112334599999864

rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].

>COG5017 Uncharacterized conserved protein [Function unknown]

Probab=87.27  E-value=5.7  Score=29.87  Aligned_cols=69  Identities=12%  Similarity=0.181  Sum_probs=48.2

Q ss_pred             ceEEE-EeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe-cCCCCCc
Q 016648          210 ARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RAGGIPD  287 (385)
Q Consensus       210 ~~l~i-~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s-~~~~~~e  287 (385)
                      .++++ +|+|...+       -...++.||-..+++..+...|.+++.    .+.-.+++.++..++|.|.- +..-+.|
T Consensus        31 e~lIvQyGn~d~kp-------vagl~v~~F~~~~kiQsli~darIVIS----HaG~GSIL~~~rl~kplIv~pr~s~y~e   99 (161)
T COG5017          31 EELIVQYGNGDIKP-------VAGLRVYGFDKEEKIQSLIHDARIVIS----HAGEGSILLLLRLDKPLIVVPRSSQYQE   99 (161)
T ss_pred             hheeeeecCCCccc-------ccccEEEeechHHHHHHHhhcceEEEe----ccCcchHHHHhhcCCcEEEEECchhHHH
Confidence            34444 78765433       123689999988999999999997773    23345788999999999854 4444455


Q ss_pred             cc
Q 016648          288 II  289 (385)
Q Consensus       288 ~~  289 (385)
                      .+
T Consensus       100 lv  101 (161)
T COG5017         100 LV  101 (161)
T ss_pred             hh
Confidence            54

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=87.23  E-value=15  Score=30.15  Aligned_cols=77  Identities=10%  Similarity=0.064  Sum_probs=50.3

Q ss_pred             CceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcc
Q 016648          209 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI  288 (385)
Q Consensus       209 ~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~  288 (385)
                      +.++.++.. ...+.+.++.....+.+....   -....+..+|+++..+..+.....+.+....|++|-+.+.+...++
T Consensus        33 ga~V~VIs~-~~~~~l~~l~~~~~i~~~~~~---~~~~~l~~adlViaaT~d~elN~~i~~~a~~~~lvn~~d~~~~~~f  108 (202)
T PRK06718         33 GAHIVVISP-ELTENLVKLVEEGKIRWKQKE---FEPSDIVDAFLVIAATNDPRVNEQVKEDLPENALFNVITDAESGNV  108 (202)
T ss_pred             CCeEEEEcC-CCCHHHHHHHhCCCEEEEecC---CChhhcCCceEEEEcCCCHHHHHHHHHHHHhCCcEEECCCCccCeE
Confidence            467777764 333456666655556654432   1134467899998887777777777777788898887776665555


Q ss_pred             c
Q 016648          289 I  289 (385)
Q Consensus       289 ~  289 (385)
                      +
T Consensus       109 ~  109 (202)
T PRK06718        109 V  109 (202)
T ss_pred             E
Confidence            4

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=86.54  E-value=4.1  Score=38.35  Aligned_cols=87  Identities=13%  Similarity=0.192  Sum_probs=57.1

Q ss_pred             HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC-CcEEEecCC--CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG--GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G-~PvI~s~~~--~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ..+.+.|+.|.+++.|...+.....+.||+..| +|||.++.-  ...+.+   +...-+++++..+....   +.++|.
T Consensus       335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~---d~~~fSV~v~~~~v~~~---~~~iL~  408 (464)
T KOG1021|consen  335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVL---DWTEFSVFVPEKDVPEL---IKNILL  408 (464)
T ss_pred             chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCc---cceEEEEEEEHHHhhhH---HHHHHH
Confidence            577888999999999999998888999999999 599988753  333444   33445555543333333   344433


Q ss_pred             --CHHHHHHHHHHHHHHH
Q 016648          319 --NQELRETMGQAARQEM  334 (385)
Q Consensus       319 --~~~~~~~~~~~a~~~~  334 (385)
                        ..+....|.++..+.+
T Consensus       409 ~i~~~~~~~m~~~v~~~v  426 (464)
T KOG1021|consen  409 SIPEEEVLRMRENVIRLV  426 (464)
T ss_pred             hcCHHHHHHHHHHHHHHH
Confidence              2334455555555433

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=85.72  E-value=26  Score=31.37  Aligned_cols=137  Identities=12%  Similarity=0.071  Sum_probs=66.6

Q ss_pred             CCCceEEEEeCCccHHHHHHHHcCC---CeEEecc----cChHHHH----HHHHhCcEEEEcC--CCCCCcHHHHHHHhc
Q 016648          207 LPEARIAFIGDGPYREELEKMFTGM---PAVFTGM----LLGEELS----QAYASGDVFVMPS--ESETLGLVVLEAMSS  273 (385)
Q Consensus       207 ~~~~~l~i~G~g~~~~~l~~~~~~~---~i~~~g~----~~~~~~~----~~~~~adi~v~ps--~~e~~~~~~~Ea~a~  273 (385)
                      +.+-++.++|.|+..+...+...+.   ++.+...    .+.+++.    .+...+|+++..|  ..-..|....|.+..
T Consensus       172 l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~~~~~~  251 (338)
T PRK00676        172 SKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHLSWESLAD  251 (338)
T ss_pred             ccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCceeeHHHHhh
Confidence            3456777777776555444433322   2333222    2334443    6678999999863  233345555555543


Q ss_pred             CCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          274 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       274 G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                      -.+-+.-|..-.+++- +.....+..++   |.|+|.+.+.+   |...+++...++...+     +..+.++. +.|++
T Consensus       252 ~~~r~~iDLAvPRdId-~v~~~~~v~Ly---~iDdL~~i~~~---n~~~R~~~~~~ae~iI-----~~~~~~~~-~~~~~  318 (338)
T PRK00676        252 IPDRIVFDFNVPRTFP-WSETPFPHRYL---DMDFISEWVQK---HLQCRKEVNNKHKLSL-----REAAYKQW-ESYEK  318 (338)
T ss_pred             ccCcEEEEecCCCCCc-cccccCCcEEE---EhHHHHHHHHH---HHHHHHHHHHHHHHHH-----HHHHHHHH-HHHHH
Confidence            2212444544333331 11222333344   56666665554   3334444445554443     34455555 46665


Q ss_pred             HHH
Q 016648          354 AIW  356 (385)
Q Consensus       354 ~~~  356 (385)
                      =+.
T Consensus       319 ~~~  321 (338)
T PRK00676        319 KLS  321 (338)
T ss_pred             HHh
Confidence            443

>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=82.22  E-value=16  Score=32.91  Aligned_cols=127  Identities=13%  Similarity=-0.001  Sum_probs=78.7

Q ss_pred             CcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEc--CC
Q 016648          182 KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP--SE  259 (385)
Q Consensus       182 ~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~p--s~  259 (385)
                      +.....+.+..+...-..+++.+.+.  +++.+.|..--.             .....+..++.+.++...++|.-  |.
T Consensus       197 ~~~aw~vSnc~~~~~R~~~~~~L~k~--l~iD~YG~c~~~-------------~~~~~~~~~~~~~~s~YKFyLAfENS~  261 (372)
T KOG2619|consen  197 KLAAWLVSNCIPRSARLDYYKELMKH--LEIDSYGECLRK-------------NANRDPSDCLLETLSHYKFYLAFENSN  261 (372)
T ss_pred             ceeeeeccccCcchHHHHHHHHHHhh--Cceeeccccccc-------------cccCCCCCcceeecccceEEEEecccC
Confidence            34555666666666555555555543  778888843110             11122334566667777777753  22


Q ss_pred             CC-CCcHHHHHHHhcC-CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHH
Q 016648          260 SE-TLGLVVLEAMSSG-IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       260 ~e-~~~~~~~Ea~a~G-~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      .+ =..-++.-|+-+| +|||... +...++++   +.-.-.+-+..++++|++.|.++-+|+..+.+.-
T Consensus       262 c~DYVTEKfw~al~~gsVPVvlg~-~n~e~fvP---~~SfI~vdDF~s~~ela~ylk~L~~n~~~Y~~Yf  327 (372)
T KOG2619|consen  262 CEDYVTEKFWNALDAGSVPVVLGP-PNYENFVP---PDSFIHVDDFQSPQELAAYLKKLDKNPAAYLSYF  327 (372)
T ss_pred             CcccccHHHHhhhhcCcccEEECC-ccccccCC---CcceEehhhcCCHHHHHHHHHHhhcCHHHHHHHH
Confidence            22 2356777888888 6777666 66677762   2222234446699999999999999998776643

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=81.07  E-value=31  Score=28.80  Aligned_cols=122  Identities=7%  Similarity=-0.070  Sum_probs=66.0

Q ss_pred             CceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHH-hcCCcEEEecCCCCCc
Q 016648          209 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM-SSGIPVVGVRAGGIPD  287 (385)
Q Consensus       209 ~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~-a~G~PvI~s~~~~~~e  287 (385)
                      +.++.++...- .+++..+....++.+...--.   ...+..+++++..+..+.....+.+.. +.|++|.+.+.+...+
T Consensus        48 gA~VtVVap~i-~~el~~l~~~~~i~~~~r~~~---~~dl~g~~LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~d  123 (223)
T PRK05562         48 GCYVYILSKKF-SKEFLDLKKYGNLKLIKGNYD---KEFIKDKHLIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGL  123 (223)
T ss_pred             CCEEEEEcCCC-CHHHHHHHhCCCEEEEeCCCC---hHHhCCCcEEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCe
Confidence            57788887433 345666666556665543211   223578888887776666666655544 6699998877665555


Q ss_pred             ccccC--CCCCeeEee-CCC----CHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          288 IIPED--QDGKIGYLF-NPG----DLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       288 ~~~~~--~~~~~g~~~-~~~----~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                      ++-+.  ..+.--+-+ ..+    =...+.+.|++++.+-+...+.....|+.+
T Consensus       124 Fi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~v  177 (223)
T PRK05562        124 CIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKA  177 (223)
T ss_pred             EEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54210  222222212 212    244566666666644333444444444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	385
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		2e-16
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		4e-16
3c4q_A	426	Structure Of The Retaining Glycosyltransferase Msha		4e-12
3c48_A	438	Structure Of The Retaining Glycosyltransferase Msha		4e-12
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		1e-09
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		1e-09
2x6q_A	416	Crystal Structure Of Trehalose Synthase Tret From P		7e-08
2gej_A	406	Crystal Structure Of Phosphatidylinositol Mannosylt		1e-07
2xmp_A	416	Crystal Structure Of Trehalose Synthase Tret Mutant		4e-07
2r60_A	499	Structure Of Apo Sucrose Phosphate Synthase (Sps) O		6e-07
2xa1_A	416	Crystal Structure Of Trehalose Synthase Tret From P		1e-06
3vue_A	536	Crystal Structure Of Rice Granule Bound Starch Synt		5e-06
2iw1_A	374	Crystal Structure Of Waag, A Glycosyltransferase In		5e-05
3fro_A	439	Crystal Structure Of Pyrococcus Abyssi Glycogen Syn		8e-05
3l01_A	428	Crystal Structure Of Monomeric Glycogen Synthase Fr		8e-05
2bis_A	440	Structure Of Glycogen Synthase From Pyrococcus Abys		9e-05
2f9f_A	177	Crystal Structure Of The Putative Mannosyl Transfer		1e-04
2bfw_A	200	Structure Of The C Domain Of Glycogen Synthase From		4e-04

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 23/314 (7%)
Query: 30  FFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-- 87
           +FH +       +Q  P  LAL+ ++     R   DI+H          A +  +++   
Sbjct: 66  YFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGER 125
Query: 88  VPIVMSYH-THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 146
           + IV + H T + V     + + L       I+F    +D+  V +V+     E   +  
Sbjct: 126 IKIVTTLHGTDITVLGSDPSLNNL-------IRFGIEQSDV--VTAVSHSLINETHELVK 176
Query: 147 ANK-IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVM 204
            NK I+     +D   +  R   ++++      E +K LI H+     V++  D ++   
Sbjct: 177 PNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISESEKILI-HISNFRKVKRVQDVVQAFA 234
Query: 205 DRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSES 260
             + E  A++  +GDGP    + ++   +      + LG++  +++  A  D+ ++ SE 
Sbjct: 235 KIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEK 294
Query: 261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 320
           E+ GLV+LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL ++
Sbjct: 295 ESFGLVLLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDE 351
Query: 321 ELRETMGQAARQEM 334
           EL   MG+ AR+ +
Sbjct: 352 ELHRNMGERARESV 365

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 23/314 (7%)
Query: 30  FFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-- 87
           +FH +       +Q  P  LAL+ ++     R   DI+H          A +  +++   
Sbjct: 86  YFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGER 145
Query: 88  VPIVMSYH-THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 146
           + IV + H T + V     + + L       I+F    +D+  V +V+     E   +  
Sbjct: 146 IKIVTTLHGTDITVLGSDPSLNNL-------IRFGIEQSDV--VTAVSHSLINETHELVK 196
Query: 147 ANK-IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVM 204
            NK I+     +D   +  R   ++++      E +K LI H+     V++  D ++   
Sbjct: 197 PNKDIQTVYNFIDERVYFKR-DMTQLKKEYGISESEKILI-HISNFRKVKRVQDVVQAFA 254
Query: 205 DRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSES 260
             + E  A++  +GDGP    + ++   +      + LG++  +++  A  D+ ++ SE 
Sbjct: 255 KIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEK 314
Query: 261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 320
           E+ GLV+LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL ++
Sbjct: 315 ESFGLVLLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDE 371
Query: 321 ELRETMGQAARQEM 334
           EL   MG+ AR+ +
Sbjct: 372 ELHRNMGERARESV 385

>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 148 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 202
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 188 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 247
Query: 203 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 252
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 248 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 307
Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 308 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 367
Query: 313 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 355
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 368 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 406

>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 148 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 202
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 208 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 267
Query: 203 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 252
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 268 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 327
Query: 253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 328 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 387
Query: 313 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 355
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 388 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 426

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PEA 210
           GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+A
Sbjct: 171 GVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230
Query: 211 RIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES-------E 261
           ++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       E
Sbjct: 231 QLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE 290
Query: 262 TLGLVVLEAMSSGIPVVGVRAGGIPDII 289
            LG+V LEA + G+PV+   +GG P+ +
Sbjct: 291 GLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 155 KGVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PE 209
            GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD 229
Query: 210 ARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES------- 260
           A++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       
Sbjct: 230 AQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDV 289
Query: 261 ETLGLVVLEAMSSGIPVVGVRAGGIPDII 289
           E LG+V LEA + G+PV+   +GG P+ +
Sbjct: 290 EGLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 179 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 225
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 226 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 282
           K+           L+G    E++    + DV +  S  E  GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2GEJ|A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man Length = 406

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 120/293 (40%), Gaps = 36/293 (12%)
Query: 65  DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA 124
           D++H   P       L + +    PIV ++HT     +    F  +++P     K + R 
Sbjct: 109 DVLHIHEPNAPSLSMLAL-QAAEGPIVATFHTSTTKSLTLSVFQGILRPYHE--KIIGRI 165
Query: 125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF--------HPRFRSSEMRWRLS 176
           A    V  +A    +EA     ++ + I   GVD  SF        +PR    E R  L 
Sbjct: 166 A----VSDLARRWQMEA---LGSDAVEI-PNGVDVASFADAPLLDGYPR----EGRTVLF 213
Query: 177 NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPA--V 234
            G  D+P      R G+   L  L +++ R P+  I  +G G   +EL +    +     
Sbjct: 214 LGRYDEP------RKGMAVLLAALPKLVARFPDVEILIVGRGD-EDELREQAGDLAGHLR 266
Query: 235 FTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 293
           F G +     + A  S DV+  P    E+ G+V++EAM++G  VV         ++    
Sbjct: 267 FLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVL---A 323
Query: 294 DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI 346
           DG  G L    D D   + L  +L + +LR      A + + +YDW   +  I
Sbjct: 324 DGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQI 376

>pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 179 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 225
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 226 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 282
           K+           L+G    E++    + DV +  S     GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRAGFGLTVTEAMWKGKPVIGRAV 347
Query: 283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 242 EELSQAYA----SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 297
           +EL+  YA     G VF + S  E  GL  +EAM+SG+P V  R GG  +I+     GK 
Sbjct: 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKY 402
Query: 298 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR 344
           G L +P D +D    L     ++E      +  +Q + E+Y W+   R
Sbjct: 403 GVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETAR 450

>pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 179 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 225
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVXAHDDPEGWIYFEKTLR 287
Query: 226 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 282
           K+           L+G    E++    + DV +  S  E  GL V EA   G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQXSIREGFGLTVTEAXWKGKPVIGRAV 347
Query: 283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 336
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ +  G  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEXGAKAKERVRK 396

>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 183 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGE 242
           PLI  +GRL  +K  D +   +  L +  +  +  G  +++ EK+   M   + G +   
Sbjct: 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAV 387
Query: 243 ELSQA------YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG 295
               A       A  DV  +PS  E  GL+ L+ M  G P      GG+ D + E + G
Sbjct: 388 VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTG 446

>pdb|2IW1|A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved In Lipopolysaccharide Biosynthesis Length = 374

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 173 WRLSNG-EPDKPLIVHVG----RLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREELE 225
           +R  NG +  + L++ VG    R GV++S++ L  + + L    + F+   D P + E  
Sbjct: 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEAL 245
Query: 226 KMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI 285
               G+ +         ++S+  A+ D+ + P+  E  G+V+LEA+++G+PV+     G 
Sbjct: 246 AEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY 305
Query: 286 PDIIPEDQDGK-IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 338
              I +   G  I   F+   L++ L K    L    LR    + AR   +  D
Sbjct: 306 AHYIADANCGTVIAEPFSQEQLNEVLRK---ALTQSPLRMAWAENARHYADTQD 356

>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 28/273 (10%)
Query: 64  PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL----VKPMWLVIK 119
           PD++H      +  GALI  K   +P V + H      +P + F       + P +  I 
Sbjct: 123 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP-YPDID 180
Query: 120 FLHRA---ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD----SESFHPRFRSSEMR 172
             H     AD+    S     D          KI     G+D    +ES+    R    +
Sbjct: 181 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKK 240
Query: 173 WRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EARIAFIGDGP----- 219
             LS  G  +    + +GR    +K +D L + ++ L       E R   IG G      
Sbjct: 241 SLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG 300
Query: 220 YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG 279
           +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV LEAM  G   + 
Sbjct: 301 WARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 359
Query: 280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
              GG+ DII  ++ G +    +PG+L + + K
Sbjct: 360 SAVGGLRDIIT-NETGILVKAGDPGELANAILK 391

>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 28/273 (10%)
Query: 64  PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL----VKPMWLVIK 119
           PD++H      +  GALI  K   +P V + H      +P + F       + P +  I 
Sbjct: 123 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP-YPDID 180
Query: 120 FLHRA---ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD----SESFHPRFRSSEMR 172
             H     AD+    S     D          KI     G+D    +ES+    R    +
Sbjct: 181 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKK 240
Query: 173 WRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EARIAFIGDGP----- 219
             LS  G  +    + +GR    +K +D L + ++ L       E R   IG G      
Sbjct: 241 SLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG 300
Query: 220 YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG 279
           +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV LEAM  G   + 
Sbjct: 301 WARSLEEKH-GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 359
Query: 280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
              GG+ DII  ++ G +    +PG+L + + K
Sbjct: 360 SAVGGLRDIIT-NETGILVKAGDPGELANAILK 391

>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 28/273 (10%)
Query: 64  PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL----VKPMWLVIK 119
           PD++H      +  GALI  K   +P V + H      +P + F       + P +  I 
Sbjct: 124 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP-YPDID 181
Query: 120 FLHRA---ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD----SESFHPRFRSSEMR 172
             H     AD+    S     D          KI     G+D    +ES+    R    +
Sbjct: 182 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKK 241
Query: 173 WRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EARIAFIGDGP----- 219
             LS  G  +    + +GR    +K +D L + ++ L       E R   IG G      
Sbjct: 242 SLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG 301
Query: 220 YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG 279
           +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV LEAM  G   + 
Sbjct: 302 WARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 360
Query: 280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
              GG+ DII  ++ G +    +PG+L + + K
Sbjct: 361 SAVGGLRDIIT-NETGILVKAGDPGELANAILK 392

>pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a Length = 177

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 186 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIG---DGPYREELEKMFTGMP---AVFTGML 239
           + V R+  EK ++    V  +L + ++  +G    G + E   +    +      F G +
Sbjct: 27  LSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIXKIAPDNVKFLGSV 86
Query: 240 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY 299
             EEL   Y+     +  ++ E  GL  +EA +SG PV+ V  GG  + +  +   K GY
Sbjct: 87  SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAXASGKPVIAVNEGGFKETVINE---KTGY 143
Query: 300 LFN 302
           L N
Sbjct: 144 LVN 146

>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 155 KGVD----SESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP 208
            G+D    +ES+    R    +  LS  G  +    + +GR    +K +D L + ++ L 
Sbjct: 4   NGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILS 63
Query: 209 ------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP 257
                 E R   IG G      +   LE+   G   V T ML  E + + Y S D  ++P
Sbjct: 64  SKKEFQEMRFIIIGKGDPELEGWARSLEEKH-GNVKVITEMLSREFVRELYGSVDFVIIP 122
Query: 258 SESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 312
           S  E  GLV LEAM  G   +    GG+ DII  ++ G +    +PG+L + + K
Sbjct: 123 SYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILK 176

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	385
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	1e-67
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	1e-65
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	8e-64
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-49
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	2e-49
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	2e-47
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	5e-43
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	6e-39
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	3e-35
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	2e-31
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	6e-31
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	1e-28
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	9e-23
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	1e-18
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	2e-14
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	1e-13
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	2e-12
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	7e-10
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	8e-07

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  217 bits (556), Expect = 1e-67
 Identities = 65/316 (20%), Positives = 118/316 (37%), Gaps = 28/316 (8%)

Query: 48  SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF 107
           +   +  +   +   + D +   +   +   A    +     ++ S H H          
Sbjct: 71  TPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-------G 123

Query: 108 SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR 167
             ++      ++ +    D+    S    +  ++A  +          GVD + F P   
Sbjct: 124 WSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHP-TFEHLPSGVDVKRFTPATP 182

Query: 168 SSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYRE 222
             +   R   G     P+I    RL   K  D L     +V+   P+A++  +G G Y  
Sbjct: 183 EDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYES 242

Query: 223 ELEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPS-------ESETLGLVVLEAMSS 273
            L ++ T +     F G L  +++    A+ D+F MP+       + E LG+V LEA + 
Sbjct: 243 TLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC 302

Query: 274 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE 333
           G+PV+   +GG P+ +        G +    D+D     L  LL +   R  MG A R  
Sbjct: 303 GVPVIAGTSGGAPETV---TPAT-GLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAH 358

Query: 334 ME-KYDWRA-ATRTIR 347
           +E ++ W     R   
Sbjct: 359 VEAEWSWEIMGERLTN 374

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  213 bits (544), Expect = 1e-65
 Identities = 68/339 (20%), Positives = 116/339 (34%), Gaps = 42/339 (12%)

Query: 32  HHIYSFPCPWYQKV---PLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC- 87
               + P P+   V       A   ++   +A    D++H   P        ++A     
Sbjct: 73  SGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEP--NAPSLSMLALQAAE 130

Query: 88  VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAA 147
            PIV ++HT     +    F  +++P        H      +  S       + AR    
Sbjct: 131 GPIVATFHTSTTKSLTLSVFQGILRP-------YHEKIIGRIAVS-------DLARRWQM 176

Query: 148 N----KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFL-- 200
                       GVD  SF                  +   ++ +GR     K +  L  
Sbjct: 177 EALGSDAVEIPNGVDVASFADAPLLDGYP-------REGRTVLFLGRYDEPRKGMAVLLA 229

Query: 201 --KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMP 257
              +++ R P+  I  +G G   E  E+       + F G +     + A  S DV+  P
Sbjct: 230 ALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAP 289

Query: 258 S-ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL 316
               E+ G+V++EAM++G  VV         ++    DG  G L    D D   + L  +
Sbjct: 290 HLGGESFGIVLVEAMAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGI 346

Query: 317 LYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 355
           L + +LR      A + + +YDW   +  I    Y    
Sbjct: 347 LEDDQLRAGYVARASERVHRYDWSVVSAQIM-RVYETVS 384

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  207 bits (530), Expect = 8e-64
 Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 29/345 (8%)

Query: 30  FFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-- 87
           +FH +       +Q  P  LAL+ ++     R   DI+H          A +  +++   
Sbjct: 66  YFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGER 125

Query: 88  VPIVMSYH-THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 146
           + IV + H T + V     + + L       I+F    +D+    S ++  +        
Sbjct: 126 IKIVTTLHGTDITVLGSDPSLNNL-------IRFGIEQSDVVTAVSHSLINETHELVKPN 178

Query: 147 ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR 206
              I+     +D   +  R  +   +         + +++H+      K +  + +   +
Sbjct: 179 -KDIQTVYNFIDERVYFKRDMTQLKKEY--GISESEKILIHISNFRKVKRVQDVVQAFAK 235

Query: 207 L---PEARIAFIGDGPYREELEKMFTGM---PAV-FTGMLLGEELSQAYASGDVFVMPSE 259
           +    +A++  +GDGP    + ++   +     V F G    + +++  A  D+ ++ SE
Sbjct: 236 IVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSE 293

Query: 260 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 319
            E+ GLV+LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL +
Sbjct: 294 KESFGLVLLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKD 350

Query: 320 QELRETMGQAARQE-MEKYDW-RAATRTIRNEQYNAAIWFWRKKR 362
           +EL   MG+ AR+   E++   +  ++      Y   +   +  +
Sbjct: 351 EELHRNMGERARESVYEQFRSEKIVSQYE--TIYYDVLRDDKNGK 393

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  170 bits (432), Expect = 1e-49
 Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 27/326 (8%)

Query: 33  HIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-VPIV 91
            +   P   +     +      + + +     D +   +   M    +  A  +C    V
Sbjct: 50  ELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNK--MPGLDVYFAADVCYAEKV 107

Query: 92  MSYHTHVPVYIPRY-TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI 150
                 +     RY  ++   +       F    +   ++ +     D +    T   + 
Sbjct: 108 AQEKGFLYRLTSRYRHYAAFERAT-----FEQGKSTKLMMLTDKQIADFQKHYQTEPERF 162

Query: 151 RIWKKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRV 203
           +I   G+  +  +           R +    +  + L++ VG     K +D        +
Sbjct: 163 QILPPGIYPDRKYSEQIPNSREIYRQKN-GIKEQQNLLLQVGSDFGRKGVDRSIEALASL 221

Query: 204 MDRLPEARIAFIGDGPYREELEKMFT--GMPA--VFTGMLLGEELSQAYASGDVFVMPSE 259
            + L    + F+       + E +    G+ +   F       ++S+  A+ D+ + P+ 
Sbjct: 222 PESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAY 279

Query: 260 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLY 318
            E  G+V+LEA+++G+PV+     G    I    D   G +   P   +     L   L 
Sbjct: 280 QEAAGIVLLEAITAGLPVLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALT 336

Query: 319 NQELRETMGQAARQEMEKYDWRAATR 344
              LR    + AR   +  D  +   
Sbjct: 337 QSPLRMAWAENARHYADTQDLYSLPE 362

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  171 bits (436), Expect = 2e-49
 Identities = 79/348 (22%), Positives = 131/348 (37%), Gaps = 31/348 (8%)

Query: 32  HHIYSFP---CPWYQKVPLSLALSPRIISEVAR--FKPDIIHA-SSPGIMVFGALIIAKL 85
            +I + P       +      A +  ++S   R     D+IH+       V    ++  L
Sbjct: 86  INIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQV--GWLLRDL 143

Query: 86  LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVI--KFLHRAADLTLVPSVAIGKDLEAAR 143
             +P++ + HT   V       S   +     I  + L   AD+  V +    +DL    
Sbjct: 144 WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY 203

Query: 144 VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG-EPDKPLIVHVGRL----GVEKSLD 198
               ++I +   G D E + P    +  R R   G      ++  VGRL    G +  + 
Sbjct: 204 DADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIK 263

Query: 199 FLKRVMDRLPEARIAFI------GDGPYREELEKMFTGMPA----VFTGMLLGEELSQAY 248
            +  + DR P+  +  I      G     +    M   +       F       EL   Y
Sbjct: 264 AVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVY 323

Query: 249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDD 308
            + D+  +PS +E+ GLV +EA +SG PV+  R GG+P  +    +G+ G L +      
Sbjct: 324 RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAV---AEGETGLLVDGHSPHA 380

Query: 309 CLSKLEPLLYNQELRETMGQAARQEMEKYDW-RAATRTIRNEQYNAAI 355
               L  LL + E R  MG+ A +    + W   A +      YN AI
Sbjct: 381 WADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLS--SLYNDAI 426

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  165 bits (420), Expect = 2e-47
 Identities = 67/349 (19%), Positives = 125/349 (35%), Gaps = 48/349 (13%)

Query: 24  FFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARF----KPDIIHASSPGIMVFGA 79
           FF +   FH+         +       L   +  E ++F      D +    P       
Sbjct: 84  FFNVTKTFHNALQGN-ESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIE 142

Query: 80  LIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL 139
               K    P +  +  H+ +  P   F   ++      +F+ +           +  +L
Sbjct: 143 FYEKK---SPWL--WRCHIDLSSPNREFWEFLR------RFVEKYDRYIFHLPEYVQPEL 191

Query: 140 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKS 196
           +       NK  I    +D  S            R+      +P+KP+I  V R    K 
Sbjct: 192 DR------NKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKG 245

Query: 197 LDFL----KRVMDRLPEARIAFIGDGP---------YREELEKMFTGMPAVFTGMLLG-- 241
           +  +    ++V +++P  ++  +G            + + L K+           L+G  
Sbjct: 246 IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVH 305

Query: 242 -EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL 300
             E++    + DV +  S  E  GL V EAM  G PV+G   GGI   I    DG+ G+L
Sbjct: 306 AREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQI---VDGETGFL 362

Query: 301 FNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDW-RAATRTIR 347
               D ++ +  +  LL + E+ + MG  A++   + +   +   R + 
Sbjct: 363 VR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score =  146 bits (371), Expect = 5e-43
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 9/167 (5%)

Query: 183 PLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGMP-AVFTGM 238
             I  VGR   EK+   L + +       +  +   G GP  ++++ +   +      G 
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF 62

Query: 239 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKI 297
           +   EL +   +  ++V  +  E+  +  LEA+S GI  V   +          D+    
Sbjct: 63  VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE---- 118

Query: 298 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 344
             LF P +  D  +K++  L N+  RE M     +    Y    +  
Sbjct: 119 RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVI 165

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score =  136 bits (344), Expect = 6e-39
 Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 25/184 (13%)

Query: 156 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 215
            V++  F  +                    + V R+  EK ++    V  +L + ++  +
Sbjct: 11  PVETSKFKFK--------------CYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIV 56

Query: 216 GDGPYREELEKMFTGMPA------VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 269
           G     +  E+    +         F G +  EEL   Y+     +  ++ E  GL  +E
Sbjct: 57  GWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIE 116

Query: 270 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE-LRETMGQ 328
           AM+SG PV+ V  GG  + +    + K GYL N  D+++ +  ++ +  N +  ++   +
Sbjct: 117 AMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPDKFKKDCFR 172

Query: 329 AARQ 332
            A++
Sbjct: 173 RAKE 176

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score =  134 bits (339), Expect = 3e-35
 Identities = 60/346 (17%), Positives = 114/346 (32%), Gaps = 72/346 (20%)

Query: 63  KPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHT--------------HVPVYIPRYTF 107
            P ++      G +    +++  +  +P   + H+              +      R+ F
Sbjct: 120 FPQVVTTHYGDGGLA--GVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKF 177

Query: 108 S-WLVKPMWLVIKFLHRAADLTLVPS-------VAIGKDLEAARVTAANKIRIWKKGVDS 159
              ++     +       AD  +V +        +      A  V   +K  +   GV++
Sbjct: 178 HRRIIAERLTM-----SYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNT 232

Query: 160 ESFHPRFR-------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR- 211
             F   +        +  +   L +   + P I+   RL  +K+   L     +  E + 
Sbjct: 233 RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD 292

Query: 212 ------IAFIGDGPYREELEKMFTGMPAV------------------FTGMLLGEELSQA 247
                      + P  E+  +       +                     +   +EL+  
Sbjct: 293 KANLVLTLRGIENP-FEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGC 351

Query: 248 Y----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP 303
           Y    + G VF + S  E  GL  +EAM+SG+P V  R GG  +I+     GK G L +P
Sbjct: 352 YAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKYGVLVDP 408

Query: 304 GDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDW-RAATRTIR 347
            D +D    L     ++E      +  +Q   E+Y W   A   + 
Sbjct: 409 EDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLE 454

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score =  125 bits (315), Expect = 2e-31
 Identities = 67/405 (16%), Positives = 115/405 (28%), Gaps = 88/405 (21%)

Query: 54  RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP---------- 103
             +S+    KPD+I  +        A ++A  L V      H       P          
Sbjct: 398 VELSKELNGKPDLIIGNYS-DGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLD 456

Query: 104 -RYTFSWLVKPMWLVIKFLHRAADLT-----------------LVPSVAIGKDLEAARVT 145
            +Y FS         +         T                    ++     +      
Sbjct: 457 DKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDV 516

Query: 146 AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG-------------------EPDKPLIV 186
              K  I   G D   + P         +  +                    +  KP++ 
Sbjct: 517 FDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILF 576

Query: 187 HVGRLGVEKSLDFLKRVMDRL----PEARIAFIG--------DGPYREELEKM------- 227
            + RL   K+L  L     +       A +  +G        D   + E++KM       
Sbjct: 577 TMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636

Query: 228 -----FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 282
                F  + +    +  GE       +   FV P+  E  GL V+EAM+ G+P      
Sbjct: 637 KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 696

Query: 283 GGIPDIIPEDQDGKIGYLFNPGDLDD----CLSKLEPLLYNQELRETMGQAARQE-MEKY 337
           GG  +II     GK G+  +P   D               +    + + +   Q   EKY
Sbjct: 697 GGPAEII---VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKY 753

Query: 338 DWRA-ATRTIRNEQYNAAIWFWRK----KRAQLLRPIQWLAKRIF 377
            W+  + R +          FW+      R +  R ++      +
Sbjct: 754 TWQIYSQRLL--TLT-GVYGFWKHVSNLDRLEARRYLEMFYALKY 795

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score =  121 bits (303), Expect = 6e-31
 Identities = 38/330 (11%), Positives = 84/330 (25%), Gaps = 25/330 (7%)

Query: 26  WILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKL 85
            + +F    Y  P          +  + R    +   K DI  A++         I++  
Sbjct: 95  DLQSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQ 154

Query: 86  LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVT 145
                +        +      F        L             V +  + K     +  
Sbjct: 155 SDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNNKGY 214

Query: 146 AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK--------SL 197
                  ++  +++   +                  + +I+  GR  V++        +L
Sbjct: 215 NFTDEYFFQPKINTTLKNYIND----------KRQKEKIILVYGRPSVKRNAFTLIVEAL 264

Query: 198 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP 257
               +  DR  E +I  +G+      L K          G L  E+ +       + +  
Sbjct: 265 KIFVQKYDRSNEWKIISVGEKHKDIALGKGI---HLNSLGKLTLEDYADLLKRSSIGISL 321

Query: 258 SESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL 317
             S       LE    G+ V+  +                       + ++    L  L 
Sbjct: 322 MISPHPSYPPLEMAHFGLRVITNKYENKDLSN----WHSNIVSLEQLNPENIAETLVELC 377

Query: 318 YNQELRETMGQAARQEMEKYDWRAATRTIR 347
            +   R+   + +   M   +       I+
Sbjct: 378 MSFNNRDVDKKESSNMMFYINEFNEFSFIK 407

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score =  114 bits (286), Expect = 1e-28
 Identities = 60/388 (15%), Positives = 119/388 (30%), Gaps = 57/388 (14%)

Query: 11  QLFVSAFGLKTDLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHAS 70
           ++ V             +  F    +       +          +   +   KPDI+   
Sbjct: 32  EVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYY---SGLSEFIDVHKPDIVMIY 88

Query: 71  SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV 130
           +   +V G  ++A        M   +H    +             L   F H      + 
Sbjct: 89  ND-PIVIGNYLLA--------MGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMA 139

Query: 131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR 190
            S     D+          I I    VD+++ +   +   +         D  L +++ R
Sbjct: 140 MSKCWISDICNYGCK--VPINIVSHFVDTKTIYDARKLVGLSEY-----NDDVLFLNMNR 192

Query: 191 LGVEKSLDFL----KRVMDRLPEARIAFIGDGP---------------YREELEKMFTGM 231
               K LD       R + + P+A++ F+ +                     ++ +FT +
Sbjct: 193 NTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHL 252

Query: 232 PAV--FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII 289
             +     +L  E +   Y + DV V  S  E  GL   E    G P++    GG  D  
Sbjct: 253 NKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYF 312

Query: 290 PED--------------QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM- 334
             D                  IG +    D+DD +        +++ R+  G+  +  + 
Sbjct: 313 SGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFT-FFKDEKNRKEYGKRVQDFVK 371

Query: 335 EKYDWRAATRTIRNEQYNAAIWFWRKKR 362
            K  W   +  I  + +N+ +    ++ 
Sbjct: 372 TKPTWDDISSDI-IDFFNSLLRVESRET 398

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 97.1 bits (242), Expect = 9e-23
 Identities = 48/319 (15%), Positives = 83/319 (26%), Gaps = 69/319 (21%)

Query: 45  VPLSLALSPRIISEVAR-FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP 103
           + +  A  P  I    R    D++H  S                   + S+H       P
Sbjct: 65  LTVVPAGEPEEIERWLRTADVDVVHDHSG----GVIGPAGLPPGTAFISSHHFTTRPVNP 120

Query: 104 RYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFH 163
                                 D  ++P                         VD   + 
Sbjct: 121 VGCTY----SSRAQRAHCGGGDDAPVIPI-----------------------PVDPARYR 153

Query: 164 PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREE 223
                       ++    +  ++ +GR+   K               R+   G     E 
Sbjct: 154 SA----------ADQVAKEDFLLFMGRVSPHKGALEAAAFA-HACGRRLVLAGPAWEPEY 202

Query: 224 LEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPSES----------ETLGLVVLEAM 271
            +++     +     G + GE      AS    +  S++          E    VV EA 
Sbjct: 203 FDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAA 262

Query: 272 SSGIPVVGVRAGGIPDIIPEDQDGKIGYL--FNPGDLDDCLSKLEPLLYNQELRETMGQA 329
            SG PVVG   G + +I+       +GY   F P +    L+ L              + 
Sbjct: 263 VSGTPVVGTGNGCLAEIV-PSVGEVVGYGTDFAPDEARRTLAGLPAS----------DEV 311

Query: 330 ARQEMEKYDWRA-ATRTIR 347
            R  +  +     A R + 
Sbjct: 312 RRAAVRLWGHVTIAERYVE 330

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 82.2 bits (204), Expect = 1e-18
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 33/200 (16%)

Query: 156 GVDSESFHPRFRSS-------EMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL 207
           G+D   ++  + +         +  +   G  +    + +GR    +K +D L + ++ L
Sbjct: 5   GIDCSFWNESYLTGSRDERKKSLLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEIL 62

Query: 208 ------PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-----EELS-QAYASGDVFV 255
                  E R   IG G    ELE     +      + +       E   + Y S D  +
Sbjct: 63  SSKKEFQEMRFIIIGKG--DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVI 120

Query: 256 MPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL 313
           +PS  E  GLV LEAM  G IP+    A GG+ DII    +   G L   GD  +  + +
Sbjct: 121 IPSYFEPFGLVALEAMCLGAIPI--ASAVGGLRDII---TNET-GILVKAGDPGELANAI 174

Query: 314 E-PLLYNQELRETMGQAARQ 332
              L  ++       +  ++
Sbjct: 175 LKALELSRSDLSKFRENCKK 194

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485

 Score = 73.3 bits (181), Expect = 2e-14
 Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 27/186 (14%)

Query: 179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFT 236
           +   PL   + RL  +K +D +   +D +     R+  +G G     LE       +   
Sbjct: 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAG--DVALEGALLAAASRHH 345

Query: 237 GML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD- 287
           G +   +G  E LS    A  D  ++PS  E  GL  L A+  G IPV  V   GG+ D 
Sbjct: 346 GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV--VARTGGLADT 403

Query: 288 IIPEDQDGKI-----GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YD 338
           +I  +          G  F       L   + +     ++ +L   M +     M+    
Sbjct: 404 VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG---MKSDVS 460

Query: 339 WRAATR 344
           W  +  
Sbjct: 461 WEKSAG 466

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 29/186 (15%)

Query: 180 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTG 237
              PL   V RL  +K LD +   +  L E   ++A +G G     L++ F    A + G
Sbjct: 290 DKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG--DPVLQEGFLAAAAEYPG 347

Query: 238 ML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD-I 288
            +   +G  E  S +     DV ++PS  E  GL  L  +  G +P+  VR  GG+ D +
Sbjct: 348 QVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPL--VRRTGGLADTV 405

Query: 289 IPEDQDGKI-----GYLF---NPGDLDDCLSK-LEPLLYNQELRETMGQAARQEMEK-YD 338
                +        G++F   N   L   + +     L+++          RQ M   + 
Sbjct: 406 SDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV--LWSR--PSLWRFVQRQAMAMDFS 461

Query: 339 WRAATR 344
           W+ A +
Sbjct: 462 WQVAAK 467

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 30/184 (16%)

Query: 180 PDKPLIVHVGRLGVE-KSLDFLKRVMDRL------PEARIAFIGDGPYREELEKMFTGMP 232
            +    + +GR     K +D L + ++ L       E R   IG G    ELE     + 
Sbjct: 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG--DPELEGWARSLE 306

Query: 233 AVFTGML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GG 284
                +         E   + Y S D  ++PS  E  GLV LEAM  G IP+    A GG
Sbjct: 307 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI--ASAVGG 364

Query: 285 IPDIIPEDQDGKIGYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWR 340
           + DII    +   G L    +PG+L + + K   L  +   +        ++    + W 
Sbjct: 365 LRDII---TNET-GILVKAGDPGELANAILKALELSRSDLSKFRE---NCKKRAMSFSWE 417

Query: 341 AATR 344
            +  
Sbjct: 418 KSAE 421

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 59.3 bits (143), Expect = 7e-10
 Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 65/270 (24%)

Query: 121 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP 180
           +    D+  + S A+     AA V + + +     GVD                  +   
Sbjct: 175 VAPTLDVIALVSPAM-----AAEVVSRDNVFHVGHGVDHNLDQLG---------DPSPYA 220

Query: 181 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGML 239
           +    V VG +  +   +F        P+     IG G  R            V   G +
Sbjct: 221 EGIHAVAVGSMLFD--PEFFVVASKAFPQVTFHVIGSGMGRHPGY-----GDNVIVYGEM 273

Query: 240 LGEELSQAYASGDVFVMPSESETLGLV-------VLEAMSSGIPVVGVRAGGIPDIIPED 292
              +           + P  SE + +        +L+    G+P V       P+ +   
Sbjct: 274 KHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAV------CPNAVVGP 327

Query: 293 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN 352
              + GY   PG+ D  ++ +   L    +R           +  +W   T         
Sbjct: 328 YKSRFGYT--PGNADSVIAAITQALEAPRVRY---------RQCLNWSDTTD-------- 368

Query: 353 AAIWFWRKKRAQLLRPIQWLAKRIFPSAEV 382
                      ++L P  +   R++P    
Sbjct: 369 -----------RVLDPRAYPETRLYPHPPT 387

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725

 Score = 50.2 bits (119), Expect = 8e-07
 Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 16/116 (13%)

Query: 239 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIG 298
           +LG +  +      + V PS  E  G    E    G+P +     G    + +  +    
Sbjct: 507 ILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQA 566

Query: 299 --------------YLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR 340
                            +   L D + +   +   +  R     A     +  DW+
Sbjct: 567 KDYGIYIVDRRFKAPDESVEQLVDYMEEF--VKKTRRQRINQRNATEALSDLLDWK 620

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	385
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.98
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.98
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.98
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.97
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.97
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.97
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.97
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.97
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.96
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.96
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.96
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.96
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.94
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.94
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.93
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.89
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.89
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.85
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.83
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.8
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.78
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.75
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.72
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.7
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.69
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.67
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.64
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.54
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.45
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.42
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.4
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.29
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	99.29
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	99.23
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.22
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.22
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.17
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.07
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.68
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	98.67
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.5
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.41
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.19
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.18
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.07
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	97.99
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	97.52
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	97.46
3tov_A	349	Glycosyl transferase family 9; structural genomics	97.23
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.05
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	96.11
3h5i_A	140	Response regulator/sensory box protein/ggdef domai	89.1
3cg4_A	142	Response regulator receiver domain protein (CHEY-;	88.45
4fyk_A	152	Deoxyribonucleoside 5'-monophosphate N-glycosidas;	87.8
3jte_A	143	Response regulator receiver protein; structural ge	86.95
3hzh_A	157	Chemotaxis response regulator (CHEY-3); phosphatas	86.95
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	86.58
2zay_A	147	Response regulator receiver protein; structural ge	86.4
3kcn_A	151	Adenylate cyclase homolog; SGX, PSI 2, structural	86.02
2pln_A	137	HP1043, response regulator; signaling protein; 1.8	85.87
1k68_A	140	Phytochrome response regulator RCPA; phosphorylate	85.81
1dbw_A	126	Transcriptional regulatory protein FIXJ; doubly wo	85.43
1qkk_A	155	DCTD, C4-dicarboxylate transport transcriptional r	85.05
2nzw_A	371	Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H	84.97
3grc_A	140	Sensor protein, kinase; protein structure initiati	84.85
3gl9_A	122	Response regulator; beta-sheet, surrounded by alph	84.59
3nhm_A	133	Response regulator; protein structure initiative I	84.12
2qzj_A	136	Two-component response regulator; 11017X, PSI-II,	84.1
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	83.53
3t6k_A	136	Response regulator receiver; flavodoxin-like, stru	83.43
2rjn_A	154	Response regulator receiver:metal-dependent phosph	83.26
3gt7_A	154	Sensor protein; structural genomics, signal receiv	83.2
3ilh_A	146	Two component response regulator; NYSGXRC, PSI-II,	82.19
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	82.06
3c3m_A	138	Response regulator receiver protein; structural ge	81.35
2qr3_A	140	Two-component system response regulator; structura	81.25
3n53_A	140	Response regulator receiver modulated diguanylate;	80.42
3hdv_A	136	Response regulator; PSI-II, structural genomics, P	80.14
2lpm_A	123	Two-component response regulator; transcription re	80.04

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=2.4e-40  Score=302.91  Aligned_cols=295  Identities=22%  Similarity=0.377  Sum_probs=241.4

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHh--CCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLL--CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      .....++.+.+++.+||+||+|++....+.+.+.++..  ++|+|+++|+........      .......++.+++.+|
T Consensus        85 ~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~ad  158 (394)
T 2jjm_A           85 LALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS------DPSLNNLIRFGIEQSD  158 (394)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT------CTTTHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC------CHHHHHHHHHHHhhCC
Confidence            34456788899999999999997654444444444444  599999999953211111      1123346778899999


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      .++++|+.+++.+.+.++. ..++.++|||+|.+.+.+.. ....+.+... +++.++++++|++.+.||++.++++++.
T Consensus       159 ~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~  235 (394)
T 2jjm_A          159 VVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD-MTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAK  235 (394)
T ss_dssp             EEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC-CHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc-hHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHH
Confidence            9999999999999988763 57999999999998876542 2233333321 3567899999999999999999999987


Q ss_pred             C---CCceEEEEeCCccHHHHHHHHcCC----CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          207 L---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       207 ~---~~~~l~i~G~g~~~~~l~~~~~~~----~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      +   ++++++++|+|+..+.+++++.+.    +|.+.|+.  +++..+|+.||++|+||..|++|++++|||+||+|||+
T Consensus       236 l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~  313 (394)
T 2jjm_A          236 IVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIG  313 (394)
T ss_dssp             HHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEE
T ss_pred             HHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEE
Confidence            6   468999999999888888887754    68999974  89999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFW  358 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~~~  358 (385)
                      ++.++..|++   .++.+|++++++|+++++++|.++++|++.++++++++++.+ ++|+|+.+++++. .+|+++++..
T Consensus       314 ~~~~~~~e~v---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~  389 (394)
T 2jjm_A          314 TRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE-TIYYDVLRDD  389 (394)
T ss_dssp             ECCTTSTTTC---CBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHTC---
T ss_pred             ecCCChHHHh---hcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhh
Confidence            9999999999   888999999999999999999999999999999999999998 7799999999997 7999998643

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=3.5e-40  Score=301.76  Aligned_cols=295  Identities=22%  Similarity=0.329  Sum_probs=246.3

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCC-EEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      .....+.+.+++.+||+||+|++....+... +++..++| +|++.|+.....       ......+...+.+++.+|.+
T Consensus        73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~-------~~~~~~~~~~~~~~~~~d~i  144 (394)
T 3okp_A           73 TTAHAMAEIIREREIDNVWFGAAAPLALMAG-TAKQAGASKVIASTHGHEVGW-------SMLPGSRQSLRKIGTEVDVL  144 (394)
T ss_dssp             HHHHHHHHHHHHTTCSEEEESSCTTGGGGHH-HHHHTTCSEEEEECCSTHHHH-------TTSHHHHHHHHHHHHHCSEE
T ss_pred             hhHHHHHHHHHhcCCCEEEECCcchHHHHHH-HHHhcCCCcEEEEeccchhhh-------hhcchhhHHHHHHHHhCCEE
Confidence            4567899999999999999998755444333 35667887 788999753211       12233455778889999999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh--hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                      +++|+..++.+.+.++ +..++.++|||+|.+.+.+.....  ..+.+.. .+++.++++|+|++.+.||++.++++++.
T Consensus       145 i~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~  222 (394)
T 3okp_A          145 TYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG-FTDTTPVIACNSRLVPRKGQDSLIKAMPQ  222 (394)
T ss_dssp             EESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTT-CCTTCCEEEEESCSCGGGCHHHHHHHHHH
T ss_pred             EEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcC-CCcCceEEEEEeccccccCHHHHHHHHHH
Confidence            9999999999999876 457999999999999887633222  2222222 24456899999999999999999999987


Q ss_pred             C----CCceEEEEeCCccHHHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCCC-------CCCcHHHHHHHhc
Q 016648          207 L----PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSES-------ETLGLVVLEAMSS  273 (385)
Q Consensus       207 ~----~~~~l~i~G~g~~~~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~~-------e~~~~~~~Ea~a~  273 (385)
                      +    ++++++|+|+|++.+.+++++..  .+|+++|+++++++.++|+.||++|+||..       |++|++++|||++
T Consensus       223 l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~  302 (394)
T 3okp_A          223 VIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC  302 (394)
T ss_dssp             HHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred             HHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHc
Confidence            6    78999999999999888887743  379999999999999999999999999998       9999999999999


Q ss_pred             CCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 016648          274 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  352 (385)
Q Consensus       274 G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~-~~s~~~~~~~~~~~iy~  352 (385)
                      |+|||+++.++..+++   .++ +|++++++|+++++++|.++++|++.++++++++++.++ +|+|+.+++++. ++|+
T Consensus       303 G~PvI~~~~~~~~e~i---~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~  377 (394)
T 3okp_A          303 GVPVIAGTSGGAPETV---TPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLT-NILQ  377 (394)
T ss_dssp             TCCEEECSSTTGGGGC---CTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHH-HHHH
T ss_pred             CCCEEEeCCCChHHHH---hcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHH
Confidence            9999999999999999   788 999999999999999999999999999999999999985 599999999997 7999


Q ss_pred             HHHHHHH
Q 016648          353 AAIWFWR  359 (385)
Q Consensus       353 ~~~~~~~  359 (385)
                      ++.....
T Consensus       378 ~~~r~~~  384 (394)
T 3okp_A          378 SEPRKLA  384 (394)
T ss_dssp             SCCC---
T ss_pred             HhccCcc
Confidence            8875443

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=2.2e-39  Score=300.62  Aligned_cols=296  Identities=24%  Similarity=0.315  Sum_probs=235.8

Q ss_pred             HHHH-hhcc-CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc--cccchhHHHHHHHHHHhCCeEEE
Q 016648           55 IISE-VARF-KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF--SWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        55 l~~~-i~~~-~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      +.+. +++. +||+||+|.+. ..+.+..+++..++|+|+++|+..+........  ..........++.+++.+|.+++
T Consensus       112 ~~~~~~~~~~~~Div~~~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~  190 (438)
T 3c48_A          112 MLSFTRREKVTYDLIHSHYWL-SGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAV  190 (438)
T ss_dssp             HHHHHHHHTCCCSEEEEEHHH-HHHHHHHHHHHHTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEE
T ss_pred             HHHHHHhccCCCCEEEeCCcc-HHHHHHHHHHHcCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEE
Confidence            3344 4444 49999999753 333445567778999999999964321111000  00011223456788999999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh--hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-  207 (385)
                      +|+..++.+.+.++.+..++.++|||+|.+.+.+.....  ..+.+... .+++++++++|++.+.||++.++++++.+ 
T Consensus       191 ~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~  269 (438)
T 3c48_A          191 NTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALF  269 (438)
T ss_dssp             SSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHH
Confidence            999999999886666678999999999998876643221  13333322 35678999999999999999999999876 


Q ss_pred             ---C--CceEEEEeC----CccHHHHHHHHcC----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC
Q 016648          208 ---P--EARIAFIGD----GPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  274 (385)
Q Consensus       208 ---~--~~~l~i~G~----g~~~~~l~~~~~~----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G  274 (385)
                         |  +++++|+|.    |+..+.+++++.+    .+|.+.|+++++++..+|+.||++|+||..|++|++++|||+||
T Consensus       270 ~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G  349 (438)
T 3c48_A          270 DRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASG  349 (438)
T ss_dssp             HHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred             hhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcC
Confidence               3  789999998    7777777777653    47999999999999999999999999999999999999999999


Q ss_pred             CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          275 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       275 ~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      +|||+++.++..+++   .++.+|++++++|+++++++|.++++|++.++++++++++.+++|+|+.+++++. ++|+++
T Consensus       350 ~PvI~~~~~~~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~  425 (438)
T 3c48_A          350 TPVIAARVGGLPIAV---AEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLS-SLYNDA  425 (438)
T ss_dssp             CCEEEESCTTHHHHS---CBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred             CCEEecCCCChhHHh---hCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHH
Confidence            999999999999999   8889999999999999999999999999999999999999986699999999997 799999


Q ss_pred             HH
Q 016648          355 IW  356 (385)
Q Consensus       355 ~~  356 (385)
                      ++
T Consensus       426 ~~  427 (438)
T 3c48_A          426 IA  427 (438)
T ss_dssp             HH
T ss_pred             hh
Confidence            85

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=7.7e-40  Score=303.71  Aligned_cols=288  Identities=23%  Similarity=0.295  Sum_probs=236.1

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc--ccc----chhHHHHHHHHHHhCCeEEEcChh
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF--SWL----VKPMWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      +.+||+||+|++.. .+.+..+++..++|+|+++|+......+....  ...    .......++..++.+|.++++|+.
T Consensus       120 ~~~~Dii~~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  198 (439)
T 3fro_A          120 EPLPDVVHFHDWHT-VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRG  198 (439)
T ss_dssp             SCCCSEEEEESGGG-HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHH
T ss_pred             CCCCeEEEecchhh-hhhHHHHhhccCCCEEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHH
Confidence            45999999998643 34445566788999999999987543322111  000    001113778889999999999999


Q ss_pred             HHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCC-------ChhhHhhhcCCCCCCcEEEEEeecc-ccccHHHHHHHHHh
Q 016648          135 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFR-------SSEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDR  206 (385)
Q Consensus       135 ~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~G~~~-~~k~~~~l~~a~~~  206 (385)
                      .++.....+..+..++.++|||+|.+.+.+...       ....+.+... +++ ++++|+|++. +.||++.++++++.
T Consensus       199 ~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~  276 (439)
T 3fro_A          199 YLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEI  276 (439)
T ss_dssp             HHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHH
T ss_pred             HHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHH
Confidence            999866655557889999999999998876521       1222333332 334 8999999999 99999999999988


Q ss_pred             C------CCceEEEEeCCccH--HHHHHHHcCC--CeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          207 L------PEARIAFIGDGPYR--EELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       207 ~------~~~~l~i~G~g~~~--~~l~~~~~~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      +      ++++++|+|+|+..  +.+++++.+.  .+.+.|+++.+++..+|+.||++|+||..|++|++++|||+||+|
T Consensus       277 l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~P  356 (439)
T 3fro_A          277 LSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAI  356 (439)
T ss_dssp             HHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCE
T ss_pred             HHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCC
Confidence            7      68999999999866  7777776543  467899999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       277 vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ||+|+.++..|++   .++ +|++++++|+++++++|.++++ |++.++++++++++.+++|||+.+++++. ++|++++
T Consensus       357 vi~s~~~~~~e~~---~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~  431 (439)
T 3fro_A          357 PIASAVGGLRDII---TNE-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSI  431 (439)
T ss_dssp             EEEESSTHHHHHC---CTT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHH-HHHHTCS
T ss_pred             eEEcCCCCcceeE---EcC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHH-HHHHHHH
Confidence            9999999999999   666 9999999999999999999999 99999999999999998899999999997 7999886


Q ss_pred             H
Q 016648          356 W  356 (385)
Q Consensus       356 ~  356 (385)
                      +
T Consensus       432 ~  432 (439)
T 3fro_A          432 D  432 (439)
T ss_dssp             C
T ss_pred             H
Confidence            3

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=1.5e-39  Score=306.66  Aligned_cols=303  Identities=18%  Similarity=0.243  Sum_probs=241.3

Q ss_pred             HHHHHHhhc--cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc-----cccch-----hHHHHHHH
Q 016648           53 PRIISEVAR--FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF-----SWLVK-----PMWLVIKF  120 (385)
Q Consensus        53 ~~l~~~i~~--~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~-----~~~~~-----~~~~~~~~  120 (385)
                      ..+.+.+++  .+||+||+|++. ..+.+..+++..++|+|++.|+..+........     .....     .....++.
T Consensus       108 ~~l~~~l~~~~~~~Divh~~~~~-~~~~~~~~~~~~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (499)
T 2r60_A          108 NKIINFYREEGKFPQVVTTHYGD-GGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERL  186 (499)
T ss_dssp             HHHHHHHHHHTCCCSEEEEEHHH-HHHHHHHHHHHHCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCEEEEcCCc-chHHHHHHHHhcCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHH
Confidence            467778877  589999999853 344455567788999999999964322111000     00000     12235678


Q ss_pred             HHHhCCeEEEcChhHHHHHHHh--cc-c----CCCcEEEeeCCCCCCCCCCCCCC---hhhHhhhcC----CCCCCcEEE
Q 016648          121 LHRAADLTLVPSVAIGKDLEAA--RV-T----AANKIRIWKKGVDSESFHPRFRS---SEMRWRLSN----GEPDKPLIV  186 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~--~~-~----~~~~i~vi~~~v~~~~~~~~~~~---~~~~~~~~~----~~~~~~~i~  186 (385)
                      +++.+|.++++|+..++.+.+.  ++ .    +..++.++|||+|.+.+.+....   ...+.++..    ..++.++|+
T Consensus       187 ~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~  266 (499)
T 2r60_A          187 TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAII  266 (499)
T ss_dssp             HHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEE
T ss_pred             HHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEE
Confidence            8999999999999999998876  54 4    56799999999999888665321   223333220    134678999


Q ss_pred             EEeeccccccHHHHHHHHHhCC-----CceEEEEeC--Cc------c-------HHHHHHHHcC----CCeEEecccChH
Q 016648          187 HVGRLGVEKSLDFLKRVMDRLP-----EARIAFIGD--GP------Y-------REELEKMFTG----MPAVFTGMLLGE  242 (385)
Q Consensus       187 ~~G~~~~~k~~~~l~~a~~~~~-----~~~l~i~G~--g~------~-------~~~l~~~~~~----~~i~~~g~~~~~  242 (385)
                      ++|++.+.||++.+++|++.+.     ..+++|+|+  |+      .       .+.+++++.+    .+|+++|+++++
T Consensus       267 ~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~  346 (499)
T 2r60_A          267 ASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQ  346 (499)
T ss_dssp             ECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHH
T ss_pred             EeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHH
Confidence            9999999999999999999883     258999997  33      1       5667776653    369999999999


Q ss_pred             HHHHHHHhC----cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          243 ELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       243 ~~~~~~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ++..+|+.|    |++|+||..|++|++++|||+||+|||+|+.++..|++   .++.+|++++++|+++++++|.++++
T Consensus       347 ~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v---~~~~~g~l~~~~d~~~la~~i~~ll~  423 (499)
T 2r60_A          347 ELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKYGVLVDPEDPEDIARGLLKAFE  423 (499)
T ss_dssp             HHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHT---GGGTSSEEECTTCHHHHHHHHHHHHS
T ss_pred             HHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHh---cCCceEEEeCCCCHHHHHHHHHHHHh
Confidence            999999999    99999999999999999999999999999999999999   78889999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHH
Q 016648          319 NQELRETMGQAARQEMEK-YDWRAATRTIRNEQYNAAIWFWRK  360 (385)
Q Consensus       319 ~~~~~~~~~~~a~~~~~~-~s~~~~~~~~~~~iy~~~~~~~~~  360 (385)
                      |++.++++++++++.+++ |||+.+++++. .+|+++++..+.
T Consensus       424 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~y~~~~~~~~~  465 (499)
T 2r60_A          424 SEETWSAYQEKGKQRVEERYTWQETARGYL-EVIQEIADRKDE  465 (499)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSBHHHHHHHHH-HHHHHHHHC---
T ss_pred             CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhhhh
Confidence            999999999999999865 99999999997 799999875543

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=3.3e-39  Score=296.49  Aligned_cols=283  Identities=22%  Similarity=0.304  Sum_probs=237.3

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.+++.+||+||++++....+ ...+++..++|+|+++|+..+...   .    ........+.+++.+|.++++
T Consensus        96 ~~~l~~~l~~~~~Dii~~~~~~~~~~-~~~~~~~~~~~~i~~~h~~~~~~~---~----~~~~~~~~~~~~~~~d~ii~~  167 (406)
T 2gek_A           96 HRKVKKWIAEGDFDVLHIHEPNAPSL-SMLALQAAEGPIVATFHTSTTKSL---T----LSVFQGILRPYHEKIIGRIAV  167 (406)
T ss_dssp             HHHHHHHHHHHCCSEEEEECCCSSSH-HHHHHHHEESSEEEEECCCCCSHH---H----HHHHHSTTHHHHTTCSEEEES
T ss_pred             HHHHHHHHHhcCCCEEEECCccchHH-HHHHHHhcCCCEEEEEcCcchhhh---h----HHHHHHHHHHHHhhCCEEEEC
Confidence            46788899999999999998755444 445566779999999999654321   0    111111223778999999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeec-cccccHHHHHHHHHhC---
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~k~~~~l~~a~~~~---  207 (385)
                      |+..++.+.+.++  ..++ ++|||+|.+.+.+.....       ...+++++++|+|++ .+.||++.++++++.+   
T Consensus       168 s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~~-------~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~  237 (406)
T 2gek_A          168 SDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLLD-------GYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVAR  237 (406)
T ss_dssp             SHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCCT-------TCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchhh-------hccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHH
Confidence            9999999987653  4578 999999877654432211       012256799999999 9999999999999887   


Q ss_pred             -CCceEEEEeCCccHHHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHHhcCCcEEEecCC
Q 016648          208 -PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       208 -~~~~l~i~G~g~~~~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                       ++++++++|.++. +.+++++.+  .+|.+.|+++++++.++|+.||++|+||. .|++|++++|||+||+|||+++.+
T Consensus       238 ~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~  316 (406)
T 2gek_A          238 FPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLD  316 (406)
T ss_dssp             STTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCH
T ss_pred             CCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCC
Confidence             6899999999987 778777664  47999999999999999999999999996 999999999999999999999999


Q ss_pred             CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 016648          284 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  357 (385)
Q Consensus       284 ~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~  357 (385)
                      +..+++   .++.+|++++++|+++++++|.++++|++.++++++++++.+++|+|+.+++++. ++|+++++.
T Consensus       317 ~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~  386 (406)
T 2gek_A          317 AFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIM-RVYETVSGA  386 (406)
T ss_dssp             HHHHHH---TTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHH-HHHHHHCCT
T ss_pred             cHHHHh---cCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhh
Confidence            999999   8889999999999999999999999999999999999999988999999999997 799998754

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=3.1e-38  Score=296.65  Aligned_cols=299  Identities=18%  Similarity=0.217  Sum_probs=230.8

Q ss_pred             HHHHHHhhc----cCCCEEEeCCCchhHHHHHHHH-HHhCCCEEEEEecCCCccc-ccc-------ccccc------chh
Q 016648           53 PRIISEVAR----FKPDIIHASSPGIMVFGALIIA-KLLCVPIVMSYHTHVPVYI-PRY-------TFSWL------VKP  113 (385)
Q Consensus        53 ~~l~~~i~~----~~pDiI~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~-~~~-------~~~~~------~~~  113 (385)
                      ..+.++++.    .+|||||+|++....+ +..++ +..++|+|+++|+...... ...       .....      ...
T Consensus       115 ~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (485)
T 2qzs_A          115 WVGAEMASGLDPFWRPDVVHAHDWHAGLA-PAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNG  193 (485)
T ss_dssp             HHHHHHTTTSSTTCCCSEEEEETGGGTTH-HHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETT
T ss_pred             HHHHHHHHHhccCCCCCEEEeeccchhHH-HHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccc
Confidence            455666663    7999999998643333 33344 5679999999999753211 100       00000      000


Q ss_pred             HHHHHHHHHHhCCeEEEcChhHHHHHHHh-ccc--------CC--CcEEEeeCCCCCCCCCCCCCC--------------
Q 016648          114 MWLVIKFLHRAADLTLVPSVAIGKDLEAA-RVT--------AA--NKIRIWKKGVDSESFHPRFRS--------------  168 (385)
Q Consensus       114 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~~--------~~--~~i~vi~~~v~~~~~~~~~~~--------------  168 (385)
                      ...+++..++.+|.++++|+.+++.+.+. ++.        +.  .++.+||||+|.+.+.+....              
T Consensus       194 ~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~  273 (485)
T 2qzs_A          194 QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDK  273 (485)
T ss_dssp             EEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGG
T ss_pred             cccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHH
Confidence            11366788899999999999999998764 221        12  689999999999888765321              


Q ss_pred             ----hhhHhhhcCCC-CCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcC--CCeE-Ee
Q 016648          169 ----SEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG--MPAV-FT  236 (385)
Q Consensus       169 ----~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~--~~i~-~~  236 (385)
                          ...+.+..... ++.++++++|++.+.||++.+++|++.+  ++++++|+|+|+  +.+.+++++.+  .+|. +.
T Consensus       274 ~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~  353 (485)
T 2qzs_A          274 AENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQI  353 (485)
T ss_dssp             HHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEE
T ss_pred             HHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeC
Confidence                22333333322 2678999999999999999999999887  689999999885  46677776654  4686 78


Q ss_pred             cccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC---------CeeEeeCCCCHH
Q 016648          237 GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLD  307 (385)
Q Consensus       237 g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~---------~~g~~~~~~~~~  307 (385)
                      |+ +.+++..+|+.||++|+||..|++|++++|||+||+|||+|+.++..|++   .++         .+|++++++|++
T Consensus       354 g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~  429 (485)
T 2qzs_A          354 GY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTV---SDCSLENLADGVASGFVFEDSNAW  429 (485)
T ss_dssp             SC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEECSSSHH
T ss_pred             CC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCcccee---ccCccccccccccceEEECCCCHH
Confidence            88 77888999999999999999999999999999999999999999999999   777         899999999999


Q ss_pred             HHHHHHhHhh---cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          308 DCLSKLEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       308 ~l~~~i~~ll---~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      +++++|.+++   +|++.++++++++++  ++|||+.+++++. ++|++++....
T Consensus       430 ~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~ly~~~~~~~~  481 (485)
T 2qzs_A          430 SLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYR-ELYYRLKLEHH  481 (485)
T ss_dssp             HHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHH-HHHHHHC----
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHH-HHHHHhhhhhc
Confidence            9999999999   799999999998874  6799999999997 79999876543

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=1.7e-38  Score=298.39  Aligned_cols=292  Identities=18%  Similarity=0.223  Sum_probs=227.8

Q ss_pred             hccCCCEEEeCCCchhHHHHHHHHHH--hCCCEEEEEecCCCccc-ccccc-------ccc------chhHHHHHHHHHH
Q 016648           60 ARFKPDIIHASSPGIMVFGALIIAKL--LCVPIVMSYHTHVPVYI-PRYTF-------SWL------VKPMWLVIKFLHR  123 (385)
Q Consensus        60 ~~~~pDiI~~~~~~~~~~~~~~~~~~--~~~p~v~~~h~~~~~~~-~~~~~-------~~~------~~~~~~~~~~~~~  123 (385)
                      ++.+|||||+|++.. .+.+..+++.  .++|+|+++|+...... .....       ...      ......+++.+++
T Consensus       127 ~~~~~DiIh~~~~~~-~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (485)
T 1rzu_A          127 PGWRPDMVHAHDWQA-AMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ  205 (485)
T ss_dssp             SSCCCSEEEEEHHHH-TTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH
T ss_pred             cCCCCCEEEecccch-hHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHh
Confidence            477999999998533 2223334443  79999999999753211 10000       000      0000126678889


Q ss_pred             hCCeEEEcChhHHHHHHHh-cc--------cCCCcEEEeeCCCCCCCCCCCCCC------------------hhhHhhhc
Q 016648          124 AADLTLVPSVAIGKDLEAA-RV--------TAANKIRIWKKGVDSESFHPRFRS------------------SEMRWRLS  176 (385)
Q Consensus       124 ~ad~ii~~s~~~~~~~~~~-~~--------~~~~~i~vi~~~v~~~~~~~~~~~------------------~~~~~~~~  176 (385)
                      .+|.++++|+..++.+.+. ++        .+..++.+||||+|.+.+.+....                  ...+.+..
T Consensus       206 ~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  285 (485)
T 1rzu_A          206 TATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR  285 (485)
T ss_dssp             HCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred             hcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC
Confidence            9999999999999998764 22        246799999999999888765431                  23333443


Q ss_pred             CCCCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCc--cHHHHHHHHcC--CCeE-EecccChHHHHHHHH
Q 016648          177 NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG--MPAV-FTGMLLGEELSQAYA  249 (385)
Q Consensus       177 ~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~--~~~~l~~~~~~--~~i~-~~g~~~~~~~~~~~~  249 (385)
                      ...++.++++++|++.+.||++.+++|++.+  ++++++|+|+|+  +.+.+++++.+  .+|+ +.|+ +.+++..+|+
T Consensus       286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~  364 (485)
T 1rzu_A          286 IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA  364 (485)
T ss_dssp             CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred             CCCCCCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence            3332367999999999999999999999887  689999999886  46677776654  4687 7888 7778899999


Q ss_pred             hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC---------CeeEeeCCCCHHHHHHHHhHhh---
Q 016648          250 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEPLL---  317 (385)
Q Consensus       250 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~---------~~g~~~~~~~~~~l~~~i~~ll---  317 (385)
                      .||++|+||..|++|++++|||+||+|||+|+.++..|++   .++         .+|++++++|+++++++|.+++   
T Consensus       365 ~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~  441 (485)
T 1rzu_A          365 GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTV---IDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY  441 (485)
T ss_dssp             HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred             cCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhhee---cccccccccccCCcceEeCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999   777         8999999999999999999999   


Q ss_pred             cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          318 YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       318 ~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      +|++.++++++++++  ++|||+.+++++. .+|+++++...
T Consensus       442 ~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~~y~~~~~~~~  480 (485)
T 1rzu_A          442 HDPKLWTQMQKLGMK--SDVSWEKSAGLYA-ALYSQLISKGH  480 (485)
T ss_dssp             TCHHHHHHHHHHHHT--CCCBHHHHHHHHH-HHHHHHTC---
T ss_pred             CCHHHHHHHHHHHHH--HhCChHHHHHHHH-HHHHHhhCCCC
Confidence            799999999998874  6799999999997 79999876443

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=5.7e-38  Score=288.89  Aligned_cols=281  Identities=17%  Similarity=0.212  Sum_probs=224.8

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCC----EEEEEecCCCcccccccccccchhHHHHHHHHHHhCC
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVP----IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  126 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p----~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  126 (385)
                      ....+.+.+++.+||+||+|.+.  ...+..+++..++|    ++...|...+....             ..+.+++++|
T Consensus        69 ~~~~l~~~l~~~~~Div~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~  133 (413)
T 3oy2_A           69 YYSGLSEFIDVHKPDIVMIYNDP--IVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRE-------------NLWWIFSHPK  133 (413)
T ss_dssp             CHHHHHHHHHHHCCSEEEEEECH--HHHHHHHHHGGGCCSCCEEEEEECCCSBSCCG-------------GGGGGGGCTT
T ss_pred             hHHHHHHHHHhcCCCEEEEcchH--HHHHHHHHHhccCCCCCceeeeccccchhhHH-------------HHHHHHhccC
Confidence            35567888999999999999643  22344445555555    34444443222110             1245778888


Q ss_pred             --eEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCC--CCcEEEEEeeccccccHHHHHH
Q 016648          127 --LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP--DKPLIVHVGRLGVEKSLDFLKR  202 (385)
Q Consensus       127 --~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~G~~~~~k~~~~l~~  202 (385)
                        .++++|+..++.+.+.+.  ..++.++|||+|.+.+.      ..+.+... ++  +.++++++|++.+.||++.+++
T Consensus       134 ~~~ii~~S~~~~~~~~~~~~--~~~~~vi~ngvd~~~~~------~~~~~~~~-~~~~~~~~il~vGr~~~~Kg~~~li~  204 (413)
T 3oy2_A          134 VVGVMAMSKCWISDICNYGC--KVPINIVSHFVDTKTIY------DARKLVGL-SEYNDDVLFLNMNRNTARKRLDIYVL  204 (413)
T ss_dssp             EEEEEESSTHHHHHHHHTTC--CSCEEECCCCCCCCCCT------THHHHTTC-GGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred             CceEEEcCHHHHHHHHHcCC--CCceEEeCCCCCHHHHH------HHHHhcCC-CcccCceEEEEcCCCchhcCcHHHHH
Confidence              999999999999999543  57999999999998771      12222221 22  6789999999999999999999


Q ss_pred             HHHhC----CCceEEEEeCCccH------HHHHHHHcCC----C-------eEEecccChHHHHHHHHhCcEEEEcCCCC
Q 016648          203 VMDRL----PEARIAFIGDGPYR------EELEKMFTGM----P-------AVFTGMLLGEELSQAYASGDVFVMPSESE  261 (385)
Q Consensus       203 a~~~~----~~~~l~i~G~g~~~------~~l~~~~~~~----~-------i~~~g~~~~~~~~~~~~~adi~v~ps~~e  261 (385)
                      |++.+    ++++++|+|+|+..      +.+++++.+.    +       +.+.|+++++++..+|+.||++|+||..|
T Consensus       205 a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E  284 (413)
T 3oy2_A          205 AAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGE  284 (413)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCC
T ss_pred             HHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcC
Confidence            99876    89999999988654      6666655432    2       78889999999999999999999999999


Q ss_pred             CCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCe---------------eE--eeCCCCHHHHHHHHhHhhcCHHHHH
Q 016648          262 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI---------------GY--LFNPGDLDDCLSKLEPLLYNQELRE  324 (385)
Q Consensus       262 ~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~---------------g~--~~~~~~~~~l~~~i~~ll~~~~~~~  324 (385)
                      ++|++++|||+||+|||+|+.++..|++   .++.+               |+  +++++|+++++++| ++++|++.++
T Consensus       285 ~~~~~~lEAma~G~PvI~s~~~g~~e~v---~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~  360 (413)
T 3oy2_A          285 GFGLCSAEGAVLGKPLIISAVGGADDYF---SGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRK  360 (413)
T ss_dssp             SSCHHHHHHHTTTCCEEEECCHHHHHHS---CTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHH
T ss_pred             CCCcHHHHHHHcCCCEEEcCCCChHHHH---ccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHH
Confidence            9999999999999999999999999999   77776               88  99999999999999 9999999999


Q ss_pred             HHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHH
Q 016648          325 TMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWRK  360 (385)
Q Consensus       325 ~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~~~~~  360 (385)
                      ++++++++.+ ++|||+.+++++. ++|+++++...+
T Consensus       361 ~~~~~a~~~~~~~fs~~~~~~~~~-~~~~~~~~~~~~  396 (413)
T 3oy2_A          361 EYGKRVQDFVKTKPTWDDISSDII-DFFNSLLRVESR  396 (413)
T ss_dssp             HHHHHHHHHHTTSCCHHHHHHHHH-HHHHHHTC----
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhcCC
Confidence            9999999998 5799999999997 799999875543

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=2.8e-37  Score=299.11  Aligned_cols=290  Identities=20%  Similarity=0.242  Sum_probs=225.6

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCccccccccc--ccc---hh--HHHHHHHHHHhCCeEEEcChh
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS--WLV---KP--MWLVIKFLHRAADLTLVPSVA  134 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~--~~~---~~--~~~~~~~~~~~ad~ii~~s~~  134 (385)
                      .+|||||+|.+ ..++.+.++++..|+|+|++.|+............  ...   ..  ....++.+++.||.|+++|+.
T Consensus       406 ~~PDVIHsH~~-~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~  484 (816)
T 3s28_A          406 GKPDLIIGNYS-DGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ  484 (816)
T ss_dssp             SCCSEEEEEHH-HHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred             CCCeEEEeCCc-hHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence            37999999975 34455677788899999999998643221111100  000   01  112356689999999999999


Q ss_pred             HHHHHHHh---cc------------------cCCCcEEEeeCCCCCCCCCCCCCChh------------------hHhhh
Q 016648          135 IGKDLEAA---RV------------------TAANKIRIWKKGVDSESFHPRFRSSE------------------MRWRL  175 (385)
Q Consensus       135 ~~~~~~~~---~~------------------~~~~~i~vi~~~v~~~~~~~~~~~~~------------------~~~~~  175 (385)
                      .++.+.+.   +.                  ....++.+||||+|.+.|.+......                  .+...
T Consensus       485 ~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~l  564 (816)
T 3s28_A          485 EIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHL  564 (816)
T ss_dssp             HHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEE
T ss_pred             HHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHh
Confidence            88852211   10                  11239999999999998877543221                  00011


Q ss_pred             c-CCCCCCcEEEEEeeccccccHHHHHHHHHhC----CCceEEEEeCCc-----------cHHHHHHHHcC----CCeEE
Q 016648          176 S-NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGP-----------YREELEKMFTG----MPAVF  235 (385)
Q Consensus       176 ~-~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~----~~~~l~i~G~g~-----------~~~~l~~~~~~----~~i~~  235 (385)
                      . ...+++++|+|+|++.+.||++.+++|+..+    ++++++|+|+|+           ..+.+++++.+    .+|.|
T Consensus       565 g~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~f  644 (816)
T 3s28_A          565 CVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRW  644 (816)
T ss_dssp             SCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEE
T ss_pred             cccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEE
Confidence            1 1245788999999999999999999999988    469999999988           45566666554    36999


Q ss_pred             eccc----ChHHHHHHHH-hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHH
Q 016648          236 TGML----LGEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL  310 (385)
Q Consensus       236 ~g~~----~~~~~~~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~  310 (385)
                      +|++    +.+++..+|+ .+|++|+||..|++|++++|||+||+|||+|+.++..+++   .++.+|++++++|+++++
T Consensus       645 lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV---~dg~~Gllv~p~D~e~LA  721 (816)
T 3s28_A          645 ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII---VHGKSGFHIDPYHGDQAA  721 (816)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHC---CBTTTBEEECTTSHHHHH
T ss_pred             ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHH---ccCCcEEEeCCCCHHHHH
Confidence            9954    4588999998 5799999999999999999999999999999999999999   889999999999999999


Q ss_pred             HHHhHhh----cCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHH
Q 016648          311 SKLEPLL----YNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       311 ~~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      ++|.+++    +|++.++++++++++.+ ++|||+.+++++. .+|+..-.
T Consensus       722 ~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll-~lY~~~g~  771 (816)
T 3s28_A          722 DTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLL-TLTGVYGF  771 (816)
T ss_dssp             HHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhH
Confidence            9997776    89999999999999998 6799999999998 69987643

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=4.2e-37  Score=275.92  Aligned_cols=250  Identities=18%  Similarity=0.165  Sum_probs=215.3

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.+++.+||+||+|++.....    .++..++| |+++|+..+...                     .+|.++++
T Consensus        73 ~~~l~~~l~~~~~Dvi~~~~~~~~~~----~~~~~~~p-v~~~h~~~~~~~---------------------~~d~ii~~  126 (342)
T 2iuy_A           73 PEEIERWLRTADVDVVHDHSGGVIGP----AGLPPGTA-FISSHHFTTRPV---------------------NPVGCTYS  126 (342)
T ss_dssp             HHHHHHHHHHCCCSEEEECSSSSSCS----TTCCTTCE-EEEEECSSSBCS---------------------CCTTEEES
T ss_pred             HHHHHHHHHhcCCCEEEECCchhhHH----HHhhcCCC-EEEecCCCCCcc---------------------cceEEEEc
Confidence            34888999999999999998643322    14567899 999999764321                     19999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCce
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR  211 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~  211 (385)
                      |+..++.+.+     ..++.++|||+|.+.+.+...          ..+++.+++|+|++.+.||++.++++++.+ +++
T Consensus       127 S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-~~~  190 (342)
T 2iuy_A          127 SRAQRAHCGG-----GDDAPVIPIPVDPARYRSAAD----------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-GRR  190 (342)
T ss_dssp             CHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTT----------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH-TCC
T ss_pred             CHHHHHHHhc-----CCceEEEcCCCChhhcCcccc----------cCCCCCEEEEEeccccccCHHHHHHHHHhc-CcE
Confidence            9999998865     468999999999887765432          123566899999999999999999999987 899


Q ss_pred             EEEEeCCccHHHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCC----------CCCCcHHHHHHHhcCCcEEE
Q 016648          212 IAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE----------SETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       212 l~i~G~g~~~~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~----------~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      ++++|+|+..+.++++..+  .+|+++|+++++++.++|+.||++|+||.          .|++|++++|||+||+|||+
T Consensus       191 l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~  270 (342)
T 2iuy_A          191 LVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVG  270 (342)
T ss_dssp             EEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEE
T ss_pred             EEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEE
Confidence            9999999888877776653  68999999999999999999999999999          89999999999999999999


Q ss_pred             ecCCCCCcccccCCC--CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQD--GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       280 s~~~~~~e~~~~~~~--~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      ++.++..|++   .+  +.+|+++++ |+++++++|.++++        ++++++.+ ++|+|+.+++++. ++|+++++
T Consensus       271 s~~~~~~e~~---~~~~~~~g~~~~~-d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~  337 (342)
T 2iuy_A          271 TGNGCLAEIV---PSVGEVVGYGTDF-APDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYV-EQYRRLLA  337 (342)
T ss_dssp             CCTTTHHHHG---GGGEEECCSSSCC-CHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHH-HHHHHHHT
T ss_pred             cCCCChHHHh---cccCCCceEEcCC-CHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHH-HHHHHHHc
Confidence            9999999999   78  889999999 99999999999987        56777877 6799999999997 79999874

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=3.2e-36  Score=282.98  Aligned_cols=287  Identities=18%  Similarity=0.221  Sum_probs=213.8

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHH------hCCCEEEEEecCCCccc------ccccccc--------c-------chhHH
Q 016648           63 KPDIIHASSPGIMVFGALIIAKL------LCVPIVMSYHTHVPVYI------PRYTFSW--------L-------VKPMW  115 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~~~~------~~~~~~~--------~-------~~~~~  115 (385)
                      .+||+|+|++.....+.++....      .++|+|+|+|+......      .......        .       .....
T Consensus       153 ~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (536)
T 3vue_A          153 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKI  232 (536)
T ss_dssp             SCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEE
T ss_pred             CCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccch
Confidence            46788899986544443332221      37899999998543211      0000000        0       00001


Q ss_pred             HHHHHHHHhCCeEEEcChhHHHHHHHhcc--------cCCCcEEEeeCCCCCCCCCCCCCCh------------------
Q 016648          116 LVIKFLHRAADLTLVPSVAIGKDLEAARV--------TAANKIRIWKKGVDSESFHPRFRSS------------------  169 (385)
Q Consensus       116 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--------~~~~~i~vi~~~v~~~~~~~~~~~~------------------  169 (385)
                      .+++..+..||.|+++|+..++.+.+.++        ....++.+|+||+|.+.|.|..+..                  
T Consensus       233 n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k  312 (536)
T 3vue_A          233 NWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK  312 (536)
T ss_dssp             EHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred             hHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence            25677889999999999999999876542        2356899999999999988753210                  


Q ss_pred             -hhHhhhcC-CCCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCccH--HHHHHHHc--CCCeEEecccCh
Q 016648          170 -EMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYR--EELEKMFT--GMPAVFTGMLLG  241 (385)
Q Consensus       170 -~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~~~--~~l~~~~~--~~~i~~~g~~~~  241 (385)
                       ....+... ..++.++|+++||+.+.||++.+++|+.++  ++.+++++|.|+..  ..++....  ..++.+.+..+.
T Consensus       313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~  392 (536)
T 3vue_A          313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA  392 (536)
T ss_dssp             HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred             HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence             01111222 235678999999999999999999999887  57899999977632  33333332  347999999999


Q ss_pred             HHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeE----------eeCCCCHHHHHH
Q 016648          242 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY----------LFNPGDLDDCLS  311 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~----------~~~~~~~~~l~~  311 (385)
                      +++..+|+.||++|+||..|++|++++|||+||+|||+|+.|+.+|++   .++.+|+          ++++.|++++++
T Consensus       393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V---~dg~~G~~~~~~~~~g~l~~~~d~~~la~  469 (536)
T 3vue_A          393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTV---IEGKTGFHMGRLSVDCKVVEPSDVKKVAA  469 (536)
T ss_dssp             HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHC---CBTTTEEECCCCCSCTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchhee---eCCCCccccccCCCceeEECCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999   8899998          677778999999


Q ss_pred             HHhHhhc--CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          312 KLEPLLY--NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       312 ~i~~ll~--~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      +|.++++  +.+.++++.+++.+  ++|||++.+++|. ++|+++.
T Consensus       470 ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~~y~-~ly~~L~  512 (536)
T 3vue_A          470 TLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAKNWE-NVLLGLG  512 (536)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHHHHH-HHHHTTC
T ss_pred             HHHHHHHhcCcHHHHHHHHHHHH--hcCCHHHHHHHHH-HHHHHhh
Confidence            9998775  44456666665532  4699999999997 7999974

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=4.9e-36  Score=276.22  Aligned_cols=278  Identities=20%  Similarity=0.242  Sum_probs=214.8

Q ss_pred             HHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE-Ec
Q 016648           53 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL-VP  131 (385)
Q Consensus        53 ~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii-~~  131 (385)
                      ..+.+.+++.+||+||+|++....+..+ + + .++|+|++.|+..+..         ....+...+.++.++|.++ ++
T Consensus       116 ~~~~~~l~~~~~Dvv~~~~~~~~~~~~~-~-~-~~~p~v~~~h~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~  183 (416)
T 2x6q_A          116 RENSKFIDLSSFDYVLVHDPQPAALIEF-Y-E-KKSPWLWRCHIDLSSP---------NREFWEFLRRFVEKYDRYIFHL  183 (416)
T ss_dssp             HHHHHSSCGGGSSEEEEESSTTGGGGGG-S-C-CCSCEEEECCSCCSSC---------CHHHHHHHHHHHTTSSEEEESS
T ss_pred             HHHHHHHhhcCCCEEEEeccchhhHHHH-H-H-hcCCEEEEEccccCCc---------cHHHHHHHHHHHHhCCEEEEec
Confidence            3456667788999999998754433222 1 1 2389999999865431         1122234455667788877 55


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh----hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~  207 (385)
                      |+...+.      .+..++.++|||+|...+.+.....    ..+.+.. .+++.++++++|++.+.||++.++++++.+
T Consensus       184 s~~~~~~------~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l  256 (416)
T 2x6q_A          184 PEYVQPE------LDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFD-VDPEKPIITQVSRFDPWKGIFDVIEIYRKV  256 (416)
T ss_dssp             GGGSCTT------SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTT-CCTTSCEEEEECCCCTTSCHHHHHHHHHHH
T ss_pred             hHHHHhh------CCccceEEeCCCCChhhhcccccChhhHHHHHHHhC-CCCCCcEEEEEeccccccCHHHHHHHHHHH
Confidence            5544431      2346899999999987665432221    2222222 245678999999999999999999999876


Q ss_pred             ----CCceEEEEeCCcc-----HHHHHHHHc----CCCeEEecccC---hHHHHHHHHhCcEEEEcCCCCCCcHHHHHHH
Q 016648          208 ----PEARIAFIGDGPY-----REELEKMFT----GMPAVFTGMLL---GEELSQAYASGDVFVMPSESETLGLVVLEAM  271 (385)
Q Consensus       208 ----~~~~l~i~G~g~~-----~~~l~~~~~----~~~i~~~g~~~---~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~  271 (385)
                          ++++++|+|+|+.     .+.++++..    ..+|+++|+++   ++++..+|+.||++|+||..|++|++++|||
T Consensus       257 ~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAm  336 (416)
T 2x6q_A          257 KEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAM  336 (416)
T ss_dssp             HHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHH
T ss_pred             HHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHH
Confidence                6899999999864     233444332    35799999765   6799999999999999999999999999999


Q ss_pred             hcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Q 016648          272 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQ  350 (385)
Q Consensus       272 a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~i  350 (385)
                      +||+|||+++.++..+++   .++.+|++++  |+++++++|.++++|++.++++++++++.+ ++|+|+.+++++. ++
T Consensus       337 a~G~PvI~~~~~g~~e~i---~~~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~  410 (416)
T 2x6q_A          337 WKGKPVIGRAVGGIKFQI---VDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYL-DI  410 (416)
T ss_dssp             HTTCCEEEESCHHHHHHC---CBTTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHH-HH
T ss_pred             HcCCCEEEccCCCChhhe---ecCCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-HH
Confidence            999999999999999999   8889999998  999999999999999999999999999998 4799999999997 79


Q ss_pred             HHHHH
Q 016648          351 YNAAI  355 (385)
Q Consensus       351 y~~~~  355 (385)
                      |++++
T Consensus       411 ~~~l~  415 (416)
T 2x6q_A          411 LNSLG  415 (416)
T ss_dssp             HHTC-
T ss_pred             HHHhh
Confidence            98765

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=1.3e-36  Score=276.11  Aligned_cols=290  Identities=14%  Similarity=0.148  Sum_probs=220.4

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHH--hCCeE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR--AADLT  128 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~i  128 (385)
                      +...+.+.+++.+||+||+|+...... .....+..+++.+.+.|+.....      .........+++..+.  .+|.+
T Consensus        68 ~~~~l~~~i~~~~~Dvv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~i  140 (374)
T 2iw1_A           68 YYAWVQNHLKEHPADRVVGFNKMPGLD-VYFAADVCYAEKVAQEKGFLYRL------TSRYRHYAAFERATFEQGKSTKL  140 (374)
T ss_dssp             HHHHHHHHHHHSCCSEEEESSCCTTCS-EEECCSCCHHHHHHHHCCHHHHT------SHHHHHHHHHHHHHHSTTCCCEE
T ss_pred             HHHHHHHHHhccCCCEEEEecCCCCce-eeeccccccceeeeecccchhhh------cHHHHHHHHHHHHHhhccCCcEE
Confidence            456788889999999999997522110 00000001112222223211100      0111222334555554  69999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh---hhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHH
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS---EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  205 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~  205 (385)
                      +++|+..++.+.+.++.+..++.++|||+|.+.+.+.....   ..+.+.. .++++++++|+|++.+.||++.++++++
T Consensus       141 i~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~K~~~~li~a~~  219 (374)
T 2iw1_A          141 MMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDFGRKGVDRSIEALA  219 (374)
T ss_dssp             EESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT-CCTTCEEEEEECSCTTTTTHHHHHHHHH
T ss_pred             EEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC-CCCCCeEEEEeccchhhcCHHHHHHHHH
Confidence            99999999999987766778999999999988776543321   2233332 2356789999999999999999999999


Q ss_pred             hC-----CCceEEEEeCCccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCc
Q 016648          206 RL-----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  276 (385)
Q Consensus       206 ~~-----~~~~l~i~G~g~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P  276 (385)
                      .+     ++++++++|+|+. +.+++++.    ..+|+++|+.  +++.++|+.||++|+||..|++|++++|||+||+|
T Consensus       220 ~l~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~P  296 (374)
T 2iw1_A          220 SLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLP  296 (374)
T ss_dssp             TSCHHHHHTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCC
T ss_pred             HhHhccCCceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCC
Confidence            87     3689999998874 45555544    2479999985  89999999999999999999999999999999999


Q ss_pred             EEEecCCCCCcccccCCCCCeeEeeC-CCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          277 VVGVRAGGIPDIIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       277 vI~s~~~~~~e~~~~~~~~~~g~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ||+++.++..+++   .++.+|++++ ++|+++++++|.++++|++.++++++++++.+++++|+.+++++. .++++.+
T Consensus       297 vi~~~~~~~~e~i---~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l  372 (374)
T 2iw1_A          297 VLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA-DIITGGL  372 (374)
T ss_dssp             EEEETTSTTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHH-HHHHCC-
T ss_pred             EEEecCCCchhhh---ccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHhh
Confidence            9999999999999   7889999998 889999999999999999999999999999998999999999996 5776554

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=99.98  E-value=8.9e-33  Score=252.35  Aligned_cols=265  Identities=10%  Similarity=0.032  Sum_probs=192.4

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHH----H---hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCC--eEEEc
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAK----L---LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD--LTLVP  131 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~----~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~ii~~  131 (385)
                      ..+||+||++.+... ..+..+.+    .   .+.|.++.+|++.+...+..       ..+...+..+..++  .++++
T Consensus       130 ~~~~Dvv~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~vi~~  201 (413)
T 2x0d_A          130 VAKHDIFIATAWWTA-YAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWS-------SQYVLAESTYKYRGPQIAVFN  201 (413)
T ss_dssp             ECTTEEEEECSHHHH-HHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSS-------HHHHHHHHTTSCCSCEEEEEE
T ss_pred             CCCCCEEEEehHHHH-HHHHHhhhhhhhhcccccCcEEEEEeechhhcCccC-------hHHHHHHHHhccCCceEEEEc
Confidence            357999999975222 21211111    1   24678888888765422111       11224455666665  58899


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeec-cccccHHHHHHHHHhC---
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~k~~~~l~~a~~~~---  207 (385)
                      |+.+++.+.+.+. +..++.+++||+|.+.+.+..          ...++...++++|++ .+.||++.+++|++.+   
T Consensus       202 S~~~~~~l~~~g~-~~~~~~~i~~g~d~~~~~~~~----------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~  270 (413)
T 2x0d_A          202 SELLKQYFNNKGY-NFTDEYFFQPKINTTLKNYIN----------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQK  270 (413)
T ss_dssp             SHHHHHHHHHHTC-CCSEEEEECCCCCHHHHTTTT----------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCC-CCCceEEeCCCcCchhhcccc----------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHh
Confidence            9999999988743 445789999999876443210          123356788999996 6889999999999765   


Q ss_pred             -CC---ceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          208 -PE---ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       208 -~~---~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                       |+   ++++++|+|+....   +....+|+|+|+++.+++.++|+.||++++||..|++|++++||||||+|||+++ +
T Consensus       271 ~~~~~~~~l~ivG~~~~~~~---l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~  346 (413)
T 2x0d_A          271 YDRSNEWKIISVGEKHKDIA---LGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNK-Y  346 (413)
T ss_dssp             CTTGGGCEEEEEESCCCCEE---EETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEEC-B
T ss_pred             CCCCCceEEEEEcCCchhhh---cCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeC-C
Confidence             43   89999998865421   1223479999999999999999999999999999999999999999999999965 5


Q ss_pred             CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          284 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       284 ~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      +..|++   .++.+|++++++|+++++++|.++++|++.+++   ++++.+++|+|+...+++  ++|+++..
T Consensus       347 g~~e~v---~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~---~~~~~~~~~~W~~~~~~~--~~~~~l~~  411 (413)
T 2x0d_A          347 ENKDLS---NWHSNIVSLEQLNPENIAETLVELCMSFNNRDV---DKKESSNMMFYINEFNEF--SFIKEIEE  411 (413)
T ss_dssp             TTBCGG---GTBTTEEEESSCSHHHHHHHHHHHHHHTC----------CCBSCGGGCCCC-----TTHHHHHT
T ss_pred             Ccchhh---hcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH---hHHHHHHhCCHHHHHHHH--HHHHHHHh
Confidence            568999   788999999999999999999999998877666   455556779999999885  58888753

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.98  E-value=7e-33  Score=253.28  Aligned_cols=247  Identities=15%  Similarity=0.146  Sum_probs=190.9

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHh
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  142 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~  142 (385)
                      ++|+||.+.... .. ...+++..++|++++.|+.....  ..   .........++..++.+|.++++|+.+++.+.+.
T Consensus       124 ~~DvIh~~~~~~-~~-~~~~~~~~~~p~v~~~h~~~~~~--~~---~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~  196 (406)
T 2hy7_A          124 ESDVIVFESGIA-VA-FIELAKRVNPAAKLVYRASDGLS--TI---NVASYIEREFDRVAPTLDVIALVSPAMAAEVVSR  196 (406)
T ss_dssp             HCSEEEEESSGG-GG-GHHHHHHHCTTSEEEEEESSCHH--HH---TCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSCS
T ss_pred             CCCEEEECCchH-HH-HHHHHHHhCCCEEEEEeccchhh--cc---cccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHhc
Confidence            689999544321 11 11345678999999999853200  00   0123345577888999999999999999887654


Q ss_pred             cccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCccHH
Q 016648          143 RVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYRE  222 (385)
Q Consensus       143 ~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~  222 (385)
                      +     ++.++|||+|.+.+.+....         ..+++++++|+|++.+.||+  +..+.+..++++++|+|+|+   
T Consensus       197 ~-----~i~vipngvd~~~f~~~~~~---------~~~~~~~i~~vGrl~~~Kg~--~~~l~~~~~~~~l~ivG~g~---  257 (406)
T 2hy7_A          197 D-----NVFHVGHGVDHNLDQLGDPS---------PYAEGIHAVAVGSMLFDPEF--FVVASKAFPQVTFHVIGSGM---  257 (406)
T ss_dssp             T-----TEEECCCCBCTTHHHHHCSC---------SCCSSEEEEEECCTTBCHHH--HHHHHHHCTTEEEEEESCSS---
T ss_pred             C-----CEEEEcCCcChHhcCccccc---------ccCCCcEEEEEeccccccCH--HHHHHHhCCCeEEEEEeCch---
Confidence            3     89999999998766432111         12234789999999999999  44444567899999999887   


Q ss_pred             HHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHH-------hcCCcEEEecCCCCCcccccCCCC
Q 016648          223 ELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM-------SSGIPVVGVRAGGIPDIIPEDQDG  295 (385)
Q Consensus       223 ~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~-------a~G~PvI~s~~~~~~e~~~~~~~~  295 (385)
                       .+++....+|+|+|+++++++..+|+.||++|+||..|++|++++|||       +||+|||+|+.      +   .++
T Consensus       258 -~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v---~~~  327 (406)
T 2hy7_A          258 -GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------V---VGP  327 (406)
T ss_dssp             -CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------G---TCS
T ss_pred             -HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------c---ccC
Confidence             222223457999999999999999999999999999999999999999       99999999987      5   677


Q ss_pred             CeeEe-eCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH--HHHHH
Q 016648          296 KIGYL-FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQ--YNAAI  355 (385)
Q Consensus       296 ~~g~~-~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~i--y~~~~  355 (385)
                      .+|++ ++++|+++++++|.++++|++         +...++|+|+.++++++ ++  |+++.
T Consensus       328 ~~G~l~v~~~d~~~la~ai~~ll~~~~---------~~~~~~~sw~~~a~~~~-~~~~y~~~~  380 (406)
T 2hy7_A          328 YKSRFGYTPGNADSVIAAITQALEAPR---------VRYRQCLNWSDTTDRVL-DPRAYPETR  380 (406)
T ss_dssp             CSSEEEECTTCHHHHHHHHHHHHHCCC---------CCCSCCCBHHHHHHHHH-CGGGSGGGB
T ss_pred             cceEEEeCCCCHHHHHHHHHHHHhCcc---------hhhhhcCCHHHHHHHHH-HhhcccccC
Confidence            88999 999999999999999999876         12346799999999997 57  77653

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.98  E-value=1e-31  Score=243.96  Aligned_cols=278  Identities=18%  Similarity=0.170  Sum_probs=206.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..++.+.+++.+||+||+|+.....+.+...++..++|++.+.|+...  ...  ....  ......+.+.+.+|.++++
T Consensus        84 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~~~--~~~~--~~~~~~~~~~~~~d~ii~~  157 (375)
T 3beo_A           84 LEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--WDK--YSPY--PEEMNRQLTGVMADLHFSP  157 (375)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--SCT--TSST--THHHHHHHHHHHCSEEEES
T ss_pred             HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--ccc--cCCC--hhHhhhhHHhhhhheeeCC
Confidence            456888999999999999876444444555677889999977665421  000  0000  0112233344569999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCC-CCCCCCCCCC-CChhhHhhhcCCCCCCcEEEEEeecccc-ccHHHHHHHHHhC-
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGVE-KSLDFLKRVMDRL-  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~-v~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~~-k~~~~l~~a~~~~-  207 (385)
                      |+..++.+.+.+ .+.+++.+++|| +|...+.+.. .....+.+.   .+++++++++|++... ||++.++++++.+ 
T Consensus       158 s~~~~~~~~~~g-~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~  233 (375)
T 3beo_A          158 TAKSATNLQKEN-KDESRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRENLGEPMRNMFRAIKRLV  233 (375)
T ss_dssp             SHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGGGTTHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcC-CCcccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccccchhHHHHHHHHHHHHH
Confidence            999999998764 456789999999 7755443221 111222221   2345567899998875 9999999999765 


Q ss_pred             ---CCceEEEEeCCcc---HHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe
Q 016648          208 ---PEARIAFIGDGPY---REELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  280 (385)
Q Consensus       208 ---~~~~l~i~G~g~~---~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s  280 (385)
                         +++++++ |.|+.   .+.++++... .+|++.|+++..++..+|+.||++|+||     |..++|||+||+|||++
T Consensus       234 ~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~  307 (375)
T 3beo_A          234 DKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVL  307 (375)
T ss_dssp             HHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEEC
T ss_pred             hhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEe
Confidence               6788554 65543   3445554332 5899999999999999999999999998     67799999999999999


Q ss_pred             cC-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 016648          281 RA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  351 (385)
Q Consensus       281 ~~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy  351 (385)
                      +. ++.++++   .++ +|+++++ |+++++++|.++++|++.+++|+++++++.++|+|+++++.+. .++
T Consensus       308 ~~~~~~~e~v---~~g-~g~~v~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~  373 (375)
T 3beo_A          308 RDTTERPEGI---EAG-TLKLAGT-DEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAIL-KHF  373 (375)
T ss_dssp             SSCCSCHHHH---HTT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHH-HHT
T ss_pred             cCCCCCceee---cCC-ceEEcCC-CHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHH-HHh
Confidence            64 8889988   677 9999976 9999999999999999999999998887777799999999886 444

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.97  E-value=1.9e-32  Score=249.61  Aligned_cols=289  Identities=15%  Similarity=0.097  Sum_probs=211.4

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHH-HHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL-HRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~  130 (385)
                      ..++.+++++.+||+||+|+.....+.+.+.++..++|++.+.|+.....  . . .   .......+.+ .+.+|.+++
T Consensus        75 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~--~-~-~---~~~~~~~~~~~~~~~d~ii~  147 (384)
T 1vgv_A           75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD--L-Y-S---PWPEEANRTLTGHLAMYHFS  147 (384)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC--T-T-S---STTHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc--c-c-C---CCchHhhHHHHHhhccEEEc
Confidence            46788899999999999997634444455566778999998888753211  0 0 0   0111123333 566999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCCC------hhhHhhhc-CCCCCCcEEEEEeecccc-ccHHHHH
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRS------SEMRWRLS-NGEPDKPLIVHVGRLGVE-KSLDFLK  201 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~~------~~~~~~~~-~~~~~~~~i~~~G~~~~~-k~~~~l~  201 (385)
                      +|+..++.+.+.+ .+.+++.+++|++ |...+.+....      ...+.++. ...+++.+++++|++... ||++.++
T Consensus       148 ~s~~~~~~l~~~g-~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li  226 (384)
T 1vgv_A          148 PTETSRQNLLREN-VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEIC  226 (384)
T ss_dssp             SSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHH
T ss_pred             CcHHHHHHHHHcC-CChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHH
Confidence            9999999998754 4567899999995 32211111000      01112211 112234578899999876 9999999


Q ss_pred             HHHHhC----CCceEEEE-eCCc-cHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcC
Q 016648          202 RVMDRL----PEARIAFI-GDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  274 (385)
Q Consensus       202 ~a~~~~----~~~~l~i~-G~g~-~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G  274 (385)
                      ++++.+    +++++++. |.++ ..+.++++... .+|++.|+++.+++..+|+.||++|+||     |..++|||++|
T Consensus       227 ~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G  301 (384)
T 1vgv_A          227 HALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLG  301 (384)
T ss_dssp             HHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGT
T ss_pred             HHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcC
Confidence            998765    67888875 5443 45666666443 4899999998899999999999999999     34489999999


Q ss_pred             CcEEEecC-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 016648          275 IPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  353 (385)
Q Consensus       275 ~PvI~s~~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~  353 (385)
                      +|||+++. ++..+++   +++ +|+++++ |+++++++|.++++|++.+++|+++++++.++|+|+++++.+. ++|++
T Consensus       302 ~PvI~~~~~~~~~e~v---~~g-~g~lv~~-d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~  375 (384)
T 1vgv_A          302 KPVLVMRDTTERPEAV---TAG-TVRLVGT-DKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALK-NNRIS  375 (384)
T ss_dssp             CCEEEESSCCSCHHHH---HHT-SEEEECS-SHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHH-HTCCC
T ss_pred             CCEEEccCCCCcchhh---hCC-ceEEeCC-CHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHH-HHHHh
Confidence            99999987 8888888   667 9999977 9999999999999999999999998887767799999999996 68888


Q ss_pred             HHHHHH
Q 016648          354 AIWFWR  359 (385)
Q Consensus       354 ~~~~~~  359 (385)
                      +.+.+.
T Consensus       376 ~~~~~~  381 (384)
T 1vgv_A          376 LGSHHH  381 (384)
T ss_dssp             C-----
T ss_pred             hccccc
Confidence            876543

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.97  E-value=1.9e-30  Score=239.76  Aligned_cols=275  Identities=16%  Similarity=0.108  Sum_probs=200.5

Q ss_pred             CCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHh
Q 016648           63 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  142 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~  142 (385)
                      .+|+||+|++....++.++..+..++|+++++|..+|.........+    ...+.+ .+..+|.+...+....+.+...
T Consensus       123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~~lp~----~~~il~-~ll~~d~i~f~~~~~~~~f~~~  197 (482)
T 1uqt_A          123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPT----YDTLLE-QLCDYDLLGFQTENDRLAFLDC  197 (482)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTT----HHHHHH-HHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHHHHhhCcc----HHHHHH-hhhccCeEEEECHHHHHHHHHH
Confidence            46999999986655555443334489999999997653211111111    111111 2345777777766655554321


Q ss_pred             -----------------cccCCCcEEEeeCCCCCCCCCCCCC---C---hhhHhhhcCCCCCCcEEEEEeeccccccHHH
Q 016648          143 -----------------RVTAANKIRIWKKGVDSESFHPRFR---S---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF  199 (385)
Q Consensus       143 -----------------~~~~~~~i~vi~~~v~~~~~~~~~~---~---~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~  199 (385)
                                       ++ ...++.++|||+|.+.|.+...   .   ...+.++    .++++|+++||+++.||++.
T Consensus       198 ~~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~----~~~~vil~VgRl~~~Kgi~~  272 (482)
T 1uqt_A          198 LSNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL----KNVQNIFSVERLDYSKGLPE  272 (482)
T ss_dssp             HHHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT----TTCEEEEEECCBCGGGCHHH
T ss_pred             HHHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHh----CCCEEEEEEeCCcccCCHHH
Confidence                             11 2357899999999877653211   1   1222222    26789999999999999999


Q ss_pred             HHHHHHhC----C----CceEEEEeC-----Ccc----HHHHHHHHcC----------CCeE-EecccChHHHHHHHHhC
Q 016648          200 LKRVMDRL----P----EARIAFIGD-----GPY----REELEKMFTG----------MPAV-FTGMLLGEELSQAYASG  251 (385)
Q Consensus       200 l~~a~~~~----~----~~~l~i~G~-----g~~----~~~l~~~~~~----------~~i~-~~g~~~~~~~~~~~~~a  251 (385)
                      +++|++++    |    ++.++++|.     ++.    .+++++++.+          .+|+ +.|.++.+++..+|+.|
T Consensus       273 ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A  352 (482)
T 1uqt_A          273 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS  352 (482)
T ss_dssp             HHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence            99999765    3    367888984     222    2344444322          1366 47999999999999999


Q ss_pred             cEEEEcCCCCCCcHHHHHHHhcCC-----cEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC-HHHHHH
Q 016648          252 DVFVMPSESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRET  325 (385)
Q Consensus       252 di~v~ps~~e~~~~~~~Ea~a~G~-----PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~-~~~~~~  325 (385)
                      |++++||..||||++++|||+||+     |+|+|+.+|..+.+   .   +|+++++.|+++++++|.+++++ ++++++
T Consensus       353 Dv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---~---~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~  426 (482)
T 1uqt_A          353 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMSLAERIS  426 (482)
T ss_dssp             SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---T---TSEEECTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred             cEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---C---CeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Confidence            999999999999999999999997     99999988888777   3   68999999999999999999984 677889


Q ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 016648          326 MGQAARQEMEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       326 ~~~~a~~~~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      +.+++++.+++|||+.++++++ ..|+++
T Consensus       427 ~~~~~~~~v~~~s~~~~a~~~l-~~l~~~  454 (482)
T 1uqt_A          427 RHAEMLDVIVKNDINHWQECFI-SDLKQI  454 (482)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHH-HHHHHS
T ss_pred             HHHHHHHHHHhCCHHHHHHHHH-HHHHhc
Confidence            9999999998899999999998 577665

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.97  E-value=3.2e-30  Score=239.05  Aligned_cols=293  Identities=14%  Similarity=0.115  Sum_probs=203.0

Q ss_pred             ccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCC-------ccccccc-cc----------ccchhHHHHHHHHH
Q 016648           61 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP-------VYIPRYT-FS----------WLVKPMWLVIKFLH  122 (385)
Q Consensus        61 ~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-------~~~~~~~-~~----------~~~~~~~~~~~~~~  122 (385)
                      +.+|||+|+|++.....+.++..+..++++|+|+|....       ...+... ..          ........+++...
T Consensus       179 ~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga  258 (725)
T 3nb0_A          179 SQHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAA  258 (725)
T ss_dssp             CSEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHH
Confidence            356999999998655444443334558999999999621       1000000 00          00112345688889


Q ss_pred             HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCCh----hhHhhh------------cCCCCCCcEEE
Q 016648          123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----EMRWRL------------SNGEPDKPLIV  186 (385)
Q Consensus       123 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~----~~~~~~------------~~~~~~~~~i~  186 (385)
                      ..||.|+|+|+.+++++...+..+.+.+  ||||+|.+.|.+.....    ..+.+.            ....++.+++.
T Consensus       259 ~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liif  336 (725)
T 3nb0_A          259 HSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFF  336 (725)
T ss_dssp             HHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEE
T ss_pred             HhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEE
Confidence            9999999999999999998876555544  99999999998852211    111111            11123445666


Q ss_pred             EEeecc-ccccHHHHHHHHHhCC--------C---ceEEEEeCCccH---------------------------------
Q 016648          187 HVGRLG-VEKSLDFLKRVMDRLP--------E---ARIAFIGDGPYR---------------------------------  221 (385)
Q Consensus       187 ~~G~~~-~~k~~~~l~~a~~~~~--------~---~~l~i~G~g~~~---------------------------------  221 (385)
                      .+||+. ..||++.+++|+.++.        +   +.|+++..+...                                 
T Consensus       337 ivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~  416 (725)
T 3nb0_A          337 IAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDH  416 (725)
T ss_dssp             EESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHH
Confidence            789999 6799999999997761        1   445555432100                                 


Q ss_pred             -----------------H---------HHH----------------------------------HHHcCC------CeEE
Q 016648          222 -----------------E---------ELE----------------------------------KMFTGM------PAVF  235 (385)
Q Consensus       222 -----------------~---------~l~----------------------------------~~~~~~------~i~~  235 (385)
                                       +         .++                                  ++....      +|+|
T Consensus       417 ~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf  496 (725)
T 3nb0_A          417 AIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIF  496 (725)
T ss_dssp             HHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEE
T ss_pred             HhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEE
Confidence                             0         000                                  000000      1455


Q ss_pred             e-cccChH------HHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCC-------CeeEee
Q 016648          236 T-GMLLGE------ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG-------KIGYLF  301 (385)
Q Consensus       236 ~-g~~~~~------~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~-------~~g~~~  301 (385)
                      + ++++..      ++.++|+.||++|+||.+|+||++++|||+||+|||+|+.+|..+.+   .++       .+|+++
T Consensus       497 ~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V---~dg~~~~~~~~tG~lV  573 (725)
T 3nb0_A          497 HPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYM---EDLIETNQAKDYGIYI  573 (725)
T ss_dssp             CCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHH---HTTSCHHHHHHTTEEE
T ss_pred             eccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhh---hccccccCCCCceEEE
Confidence            4 667665      58999999999999999999999999999999999999999999988   554       368877


Q ss_pred             C---CCCHHHHHHHHhHhhc-----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          302 N---PGDLDDCLSKLEPLLY-----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       302 ~---~~~~~~l~~~i~~ll~-----~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      .   +.|+++++++|.+++.     +++.++.+++++++.+++|+|++++++++ ++|++++....
T Consensus       574 ~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl-~~Ye~aL~~~~  638 (725)
T 3nb0_A          574 VDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV-KARQLALRRGY  638 (725)
T ss_dssp             ECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHH-HHHHHHHHHHC
T ss_pred             eCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhcc
Confidence            3   4566666666655553     67788899999988888999999999998 79999997543

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.97  E-value=4.6e-30  Score=232.10  Aligned_cols=258  Identities=17%  Similarity=0.191  Sum_probs=200.0

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..++.+.+++.+||+||++.+... +.+...++..++|+|++.|+..+.               ...+++.+.+|.+++.
T Consensus        85 ~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~---------------~~~~~~~~~~d~v~~~  148 (364)
T 1f0k_A           85 WRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAG---------------LTNKWLAKIATKVMQA  148 (364)
T ss_dssp             HHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCC---------------HHHHHHTTTCSEEEES
T ss_pred             HHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCc---------------HHHHHHHHhCCEEEec
Confidence            456788889999999999976422 334556778899999988885421               1345677889999998


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCc-EEEEEeeccccccHHHHHHHHHhCC-C
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP-LIVHVGRLGVEKSLDFLKRVMDRLP-E  209 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~G~~~~~k~~~~l~~a~~~~~-~  209 (385)
                      ++..       +  +  ++.+++||++.+.+.+..    .+.+... .++.+ ++++.|++.+.|+.+.++++++.++ +
T Consensus       149 ~~~~-------~--~--~~~~i~n~v~~~~~~~~~----~~~~~~~-~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~~  212 (364)
T 1f0k_A          149 FPGA-------F--P--NAEVVGNPVRTDVLALPL----PQQRLAG-REGPVRVLVVGGSQGARILNQTMPQVAAKLGDS  212 (364)
T ss_dssp             STTS-------S--S--SCEECCCCCCHHHHTSCC----HHHHHTT-CCSSEEEEEECTTTCCHHHHHHHHHHHHHHGGG
T ss_pred             Chhh-------c--C--CceEeCCccchhhcccch----hhhhccc-CCCCcEEEEEcCchHhHHHHHHHHHHHHHhcCC
Confidence            8764       1  2  578999999877654321    1122222 23444 4556678999999999999998875 6


Q ss_pred             ce-EEEEeCCccHHHHHHHHcC---CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC
Q 016648          210 AR-IAFIGDGPYREELEKMFTG---MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  285 (385)
Q Consensus       210 ~~-l~i~G~g~~~~~l~~~~~~---~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~  285 (385)
                      ++ ++++|+++ .+.+++.+.+   .+|++.|++  +++..+|+.||++|+||.    |++++|||++|+|||+++.++.
T Consensus       213 ~~~l~i~G~~~-~~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~  285 (364)
T 1f0k_A          213 VTIWHQSGKGS-QQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHK  285 (364)
T ss_dssp             EEEEEECCTTC-HHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCT
T ss_pred             cEEEEEcCCch-HHHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCC
Confidence            77 56688887 3566655543   379999999  899999999999999983    9999999999999999999876


Q ss_pred             C--------cccccCCCCCeeEeeCCCC--HHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          286 P--------DIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       286 ~--------e~~~~~~~~~~g~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      +        ++.   +++ .|++++++|  +++++++|.++  |++.++++++++++.+++|+|+.+++++. .+|++.-
T Consensus       286 ~~~q~~~~~~~~---~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~  358 (364)
T 1f0k_A          286 DRQQYWNALPLE---KAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVS-RVARALE  358 (364)
T ss_dssp             TCHHHHHHHHHH---HTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHH-HHHTTC-
T ss_pred             chhHHHHHHHHH---hCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHHHHHHHH-HHHHHHH
Confidence            4        355   444 499999888  99999999999  99999999999998888899999999997 6887754

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.97  E-value=3.4e-29  Score=228.45  Aligned_cols=286  Identities=15%  Similarity=0.096  Sum_probs=212.1

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      +.++.+.++...-|+|++|+++.+.++.++..+..+.++.+.+|..+|....-   ..+-..++.-.-..+..||.|.+.
T Consensus       138 A~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f---~~Lp~~~r~ell~gll~~DligF~  214 (496)
T 3t5t_A          138 ADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYW---RILPKEIRTGILHGMLPATTIGFF  214 (496)
T ss_dssp             HHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHH---TTSCHHHHHHHHHHHTTSSEEEES
T ss_pred             HHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHH---hhCcHhHHHHHHHHHHhCCEEEEe
Confidence            33343433323469999999988888877666667899999999987653221   111110112223355679999999


Q ss_pred             ChhHHHHHHHh----c-ccC-------------CCcEEEeeCCCCCCCCCCCCCC--hhhHhhhcCCCCCCcEEEEEeec
Q 016648          132 SVAIGKDLEAA----R-VTA-------------ANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLIVHVGRL  191 (385)
Q Consensus       132 s~~~~~~~~~~----~-~~~-------------~~~i~vi~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~G~~  191 (385)
                      +....+.+.+.    . +.+             ..++.++|+|||.+.|.+....  ...+.+.    .++.+|+++||+
T Consensus       215 t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~----~~~~lIl~VgRL  290 (496)
T 3t5t_A          215 ADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWA----DGHRLVVHSGRT  290 (496)
T ss_dssp             SHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHH----TTSEEEEEEEES
T ss_pred             cHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHh----CCceEEEEcccC
Confidence            99888776543    1 110             1267899999999988765431  2233332    267899999999


Q ss_pred             cccccHHHHHHHHHhC----CC---ceEEEEeC-----CccH----HHHHHHHcCC-------CeEEecccChHHHHHHH
Q 016648          192 GVEKSLDFLKRVMDRL----PE---ARIAFIGD-----GPYR----EELEKMFTGM-------PAVFTGMLLGEELSQAY  248 (385)
Q Consensus       192 ~~~k~~~~l~~a~~~~----~~---~~l~i~G~-----g~~~----~~l~~~~~~~-------~i~~~g~~~~~~~~~~~  248 (385)
                      ++.||++.+++|+ ++    |+   +.++++|.     ++..    +++++++.+.       .|+|+|.++.+++..+|
T Consensus       291 d~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly  369 (496)
T 3t5t_A          291 DPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACF  369 (496)
T ss_dssp             SGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHH
T ss_pred             ccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHH
Confidence            9999999999998 54    54   45777762     3322    3344433221       58999999999999999


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcC---CcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC-HHHHH
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSG---IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRE  324 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G---~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~-~~~~~  324 (385)
                      +.||++++||..||||++.+|||+||   .|+|+|+.+|..+.+     +.+|++++|.|+++++++|.+++++ +++++
T Consensus       370 ~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l-----~~~allVnP~D~~~lA~AI~~aL~m~~~er~  444 (496)
T 3t5t_A          370 RRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL-----GEYCRSVNPFDLVEQAEAISAALAAGPRQRA  444 (496)
T ss_dssp             HHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH-----GGGSEEECTTBHHHHHHHHHHHHHCCHHHHH
T ss_pred             HhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh-----CCCEEEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence            99999999999999999999999997   899999999988888     4578999999999999999999985 56788


Q ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHH
Q 016648          325 TMGQAARQEMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       325 ~~~~~a~~~~~~~s~~~~~~~~~~~i  350 (385)
                      ++.++.++.+++++...+++.+++.+
T Consensus       445 ~r~~~~~~~V~~~d~~~W~~~fl~~L  470 (496)
T 3t5t_A          445 EAAARRRDAARPWTLEAWVQAQLDGL  470 (496)
T ss_dssp             HHHHHHHHHHTTCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            88899999999999999999998644

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.96  E-value=1.5e-28  Score=202.90  Aligned_cols=180  Identities=23%  Similarity=0.347  Sum_probs=154.2

Q ss_pred             eeCCCCCCCCC--CCCC-----ChhhHhhhcCCCCCCcEEEEEeecc-ccccHHHHHHHHHhC------CCceEEEEeCC
Q 016648          153 WKKGVDSESFH--PRFR-----SSEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDG  218 (385)
Q Consensus       153 i~~~v~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~i~~~G~~~-~~k~~~~l~~a~~~~------~~~~l~i~G~g  218 (385)
                      ||||+|.+.|.  +...     ....+.+.  ..++.++++|+|++. +.||++.++++++.+      ++++++++|.+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~--~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~   79 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHT--TCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHc--CCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence            68999999998  6542     23333333  334556999999999 999999999999876      47999999998


Q ss_pred             c--cHHHHHHHHcCC-CeEE-ecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCC
Q 016648          219 P--YREELEKMFTGM-PAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD  294 (385)
Q Consensus       219 ~--~~~~l~~~~~~~-~i~~-~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~  294 (385)
                      +  ..+.+++++.+. +|++ +|+++++++..+|+.||++|+||..|++|++++|||++|+|||+++.++..+++    +
T Consensus        80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~----~  155 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII----T  155 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC----C
T ss_pred             ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc----C
Confidence            8  777777776654 7999 999999999999999999999999999999999999999999999999988887    4


Q ss_pred             CCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCC
Q 016648          295 GKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  338 (385)
Q Consensus       295 ~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s  338 (385)
                      +.+|++++++|+++++++|.++++ |++.++++++++++.+++||
T Consensus       156 ~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~fs  200 (200)
T 2bfw_A          156 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  200 (200)
T ss_dssp             TTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             CCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999 99999999999999885575

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.96  E-value=1.5e-28  Score=196.60  Aligned_cols=158  Identities=23%  Similarity=0.344  Sum_probs=137.5

Q ss_pred             CcEEEEEeeccccccHHHHHHHHHhC---CCceEEEEeCCccHHHHHHHHcCC--CeEEecccChHHHHHHHHhCcEEEE
Q 016648          182 KPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVM  256 (385)
Q Consensus       182 ~~~i~~~G~~~~~k~~~~l~~a~~~~---~~~~l~i~G~g~~~~~l~~~~~~~--~i~~~g~~~~~~~~~~~~~adi~v~  256 (385)
                      +++|+|+|++.+.||++.++++++.+   ++++++++|+|+..+.+++++.+.  ++.+ |+++.+++..+|+.||++|+
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~   80 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVH   80 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEE
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEE
Confidence            46899999999999999999999988   579999999999888888877644  6788 99999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHhcCC-cEEE-ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          257 PSESETLGLVVLEAMSSGI-PVVG-VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       257 ps~~e~~~~~~~Ea~a~G~-PvI~-s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                      ||..|++|++++|||++|+ |||+ ++.++..+++   .++.+  +++++|+++++++|.++++|++.++++++++++.+
T Consensus        81 ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~---~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~  155 (166)
T 3qhp_A           81 AANVESEAIACLEAISVGIVPVIANSPLSATRQFA---LDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA  155 (166)
T ss_dssp             CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGC---SSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhc---cCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            9999999999999999998 9999 5678889988   55443  77888999999999999999999999999999999


Q ss_pred             HhCCHHHHHHH
Q 016648          335 EKYDWRAATRT  345 (385)
Q Consensus       335 ~~~s~~~~~~~  345 (385)
                      ++|+|+.++++
T Consensus       156 ~~~s~~~~~~~  166 (166)
T 3qhp_A          156 LNYTLENSVIQ  166 (166)
T ss_dssp             HHHC-------
T ss_pred             HHCChhhhhcC
Confidence            88999998763

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.96  E-value=3.9e-28  Score=232.39  Aligned_cols=263  Identities=12%  Similarity=0.082  Sum_probs=198.6

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhH-HHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ..++.+.+++.+|||||.++..... ....+ + ....|++++.|++.... .   ....          .+..+|.+++
T Consensus       271 ~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~---~~~~----------~~~~~d~~i~  334 (568)
T 2vsy_A          271 HLATAKHIRHHGIDLLFDLRGWGGGGRPEVF-A-LRPAPVQVNWLAYPGTS-G---APWM----------DYVLGDAFAL  334 (568)
T ss_dssp             HHHHHHHHHHTTCSEEEECSSCTTCSSCHHH-H-TCCSSEEEEESSSSSCC-C---CTTC----------CEEEECTTTS
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCcchHHHH-h-cCCCceeEeeecCCccc-C---CCCc----------eEEEECCCcC
Confidence            5678899999999999987543211 11111 1 23568888877742111 1   0000          1124788889


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                      +|+...+     +   .+++.++||........+.......+.++  ..++..+++++|++.+ ||++.+++++..+   
T Consensus       335 ~s~~~~~-----~---~~~i~~ipn~~~~~~~~~~~~~~~~r~~~--~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~  403 (568)
T 2vsy_A          335 PPALEPF-----Y---SEHVLRLQGAFQPSDTSRVVAEPPSRTQC--GLPEQGVVLCCFNNSY-KLNPQSMARMLAVLRE  403 (568)
T ss_dssp             CTTTGGG-----C---SSEEEECSSCSCCCCTTCCCCCCCCTGGG--TCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHH
T ss_pred             CcccccC-----C---cceeEcCCCcCCCCCCCCCCCCCCCcccc--CCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHh
Confidence            8886543     2   26899999955433211111111122222  2234445679999999 9999999998765   


Q ss_pred             -CCceEEEEe-CCccHHHHHHHHcC-----CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE-
Q 016648          208 -PEARIAFIG-DGPYREELEKMFTG-----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG-  279 (385)
Q Consensus       208 -~~~~l~i~G-~g~~~~~l~~~~~~-----~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~-  279 (385)
                       |+++++|+| +|+..+.+++.+.+     .+|+|.|+++++++..+|+.||++|+||.. |+|++++|||+||+|||+ 
T Consensus       404 ~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~  482 (568)
T 2vsy_A          404 VPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTT  482 (568)
T ss_dssp             CTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBC
T ss_pred             CCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEec
Confidence             789999999 88888888777653     469999999999999999999999999999 999999999999999999 


Q ss_pred             ------ecCC-------CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH---HhCCHHHHH
Q 016648          280 ------VRAG-------GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM---EKYDWRAAT  343 (385)
Q Consensus       280 ------s~~~-------~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~---~~~s~~~~~  343 (385)
                            |+.+       +.++++   .+          |++++++++.++++|++.++++++++++.+   +.|+|+.++
T Consensus       483 ~g~~~~s~~~~~~l~~~g~~e~v---~~----------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~  549 (568)
T 2vsy_A          483 PGETFAARVAGSLNHHLGLDEMN---VA----------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFA  549 (568)
T ss_dssp             CCSSGGGSHHHHHHHHHTCGGGB---CS----------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHH
T ss_pred             cCCCchHHHHHHHHHHCCChhhh---cC----------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHH
Confidence                  9999       888887   32          899999999999999999999999999998   569999999


Q ss_pred             HHHHHHHHHHHHH
Q 016648          344 RTIRNEQYNAAIW  356 (385)
Q Consensus       344 ~~~~~~iy~~~~~  356 (385)
                      +++. .+|++++.
T Consensus       550 ~~~~-~~y~~~~~  561 (568)
T 2vsy_A          550 DDFG-ALLQALAR  561 (568)
T ss_dssp             HHHH-HHHHHHHH
T ss_pred             HHHH-HHHHHHHH
Confidence            9997 79999875

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.96  E-value=1.8e-27  Score=209.98  Aligned_cols=263  Identities=16%  Similarity=0.100  Sum_probs=195.4

Q ss_pred             HHHHHhhcc-CCCEEEeCCCchh--HHHHHHHHHH--hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           54 RIISEVARF-KPDIIHASSPGIM--VFGALIIAKL--LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        54 ~l~~~i~~~-~pDiI~~~~~~~~--~~~~~~~~~~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      ++..++... ++|+|+++.|...  .+...++.+.  .++|+++.+||.+|......      +.....++.++++||.|
T Consensus        64 ~~~~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~~------~~~~~~E~~~y~~aD~I  137 (339)
T 3rhz_A           64 RLDGIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSGN------FYLMDRTIAYYNKADVV  137 (339)
T ss_dssp             HHHHHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGGG------GGGHHHHHHHHTTCSEE
T ss_pred             HHHHHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCccc------hhhHHHHHHHHHHCCEE
Confidence            444455544 6899999988542  2223334443  48999999999987654321      12233789999999999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCC
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP  208 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~  208 (385)
                      +++|+.+++.+.+.+. +..++.++++. +..  .+...        . ...++++++|+|+++....+..+      .+
T Consensus       138 i~~S~~~~~~l~~~G~-~~~ki~~~~~~-~~~--~~~~~--------~-~~~~~~~i~yaG~l~k~~~L~~l------~~  198 (339)
T 3rhz_A          138 VAPSQKMIDKLRDFGM-NVSKTVVQGMW-DHP--TQAPM--------F-PAGLKREIHFPGNPERFSFVKEW------KY  198 (339)
T ss_dssp             EESCHHHHHHHHHTTC-CCSEEEECCSC-CCC--CCCCC--------C-CCEEEEEEEECSCTTTCGGGGGC------CC
T ss_pred             EECCHHHHHHHHHcCC-CcCceeecCCC-Ccc--Ccccc--------c-ccCCCcEEEEeCCcchhhHHHhC------CC
Confidence            9999999999998764 44677655442 211  01000        0 12345789999999854332221      27


Q ss_pred             CceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCC-------CCCCcHHHHHHHhcCCcEEEec
Q 016648          209 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-------SETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       209 ~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~-------~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +++|+|+|+|++.    +  .. ||+|+|++|.++++.+++.+|+.++...       ....|.+++||||+|+|||+++
T Consensus       199 ~~~f~ivG~G~~~----~--l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~  271 (339)
T 3rhz_A          199 DIPLKVYTWQNVE----L--PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE  271 (339)
T ss_dssp             SSCEEEEESCCCC----C--CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred             CCeEEEEeCCccc----C--cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence            8999999999864    1  23 8999999999999999999999887621       1356999999999999999999


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      .++..+++   .++.+|++++  +.+++++++..+  +++.+++|++++++..++++++...++.+.+.+.+++
T Consensus       272 ~~~~~~~v---~~~~~G~~~~--~~~e~~~~i~~l--~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~~  338 (339)
T 3rhz_A          272 GIANQELI---ENNGLGWIVK--DVEEAIMKVKNV--NEDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQAI  338 (339)
T ss_dssp             TCTTTHHH---HHHTCEEEES--SHHHHHHHHHHC--CHHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHH---HhCCeEEEeC--CHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhc
Confidence            99999999   8889999987  789999999987  4677899999999998888888888877766665554

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.94  E-value=7.2e-26  Score=205.47  Aligned_cols=277  Identities=17%  Similarity=0.134  Sum_probs=196.1

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..++.+++++.+||+||+|+.....+.+.+.++..++|++...++... . . ....+   ......+.+.+.+|.++++
T Consensus        80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~-~-~-~~~~~---~~~~~~~~~~~~~~~~~~~  153 (376)
T 1v4v_A           80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS-G-N-LKEPF---PEEANRRLTDVLTDLDFAP  153 (376)
T ss_dssp             HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC-S-C-TTSST---THHHHHHHHHHHCSEEEES
T ss_pred             HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc-c-c-ccCCC---chHHHHHHHHHHhceeeCC
Confidence            457888899999999999976555555566778899998754333211 1 0 00001   1112345566789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                      |+..++.+.+.+ .+.+++.+++|+. |...+.+.  ....+.+  . .+++++++++|++...||++.++++++.+   
T Consensus       154 s~~~~~~l~~~g-~~~~ki~vi~n~~~d~~~~~~~--~~~~~~~--~-~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~  227 (376)
T 1v4v_A          154 TPLAKANLLKEG-KREEGILVTGQTGVDAVLLAAK--LGRLPEG--L-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEA  227 (376)
T ss_dssp             SHHHHHHHHTTT-CCGGGEEECCCHHHHHHHHHHH--HCCCCTT--C-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcC-CCcceEEEECCchHHHHhhhhh--hhHHHHh--c-CCCCEEEEEeCcccchHHHHHHHHHHHHHHhh
Confidence            999999998764 4567899999864 32111000  0000011  1 23455677899987778999999998765   


Q ss_pred             -CCceEEEE-eCCc-cHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe-cC
Q 016648          208 -PEARIAFI-GDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RA  282 (385)
Q Consensus       208 -~~~~l~i~-G~g~-~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s-~~  282 (385)
                       +++++++. |+++ ..+.++++... .+|++.|+++..++..+|+.||++|.||     +..++|||++|+|+|++ +.
T Consensus       228 ~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-----~g~~lEA~a~G~PvI~~~~~  302 (376)
T 1v4v_A          228 FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPVVVLRNV  302 (376)
T ss_dssp             CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCEEECSSS
T ss_pred             CCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-----cCHHHHHHHcCCCEEeccCC
Confidence             67888885 7665 45667666543 4799999998889999999999999998     33388999999999987 56


Q ss_pred             CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       283 ~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ++..+++   .++ +|++++ .|+++++++|.++++|++.+++|++++    ++|++...++++. +++.+++
T Consensus       303 ~~~~~~~---~~g-~g~lv~-~d~~~la~~i~~ll~d~~~~~~~~~~~----~~~~~~~~~~~i~-~~i~~~~  365 (376)
T 1v4v_A          303 TERPEGL---KAG-ILKLAG-TDPEGVYRVVKGLLENPEELSRMRKAK----NPYGDGKAGLMVA-RGVAWRL  365 (376)
T ss_dssp             CSCHHHH---HHT-SEEECC-SCHHHHHHHHHHHHTCHHHHHHHHHSC----CSSCCSCHHHHHH-HHHHHHT
T ss_pred             Ccchhhh---cCC-ceEECC-CCHHHHHHHHHHHHhChHhhhhhcccC----CCCCCChHHHHHH-HHHHHHh
Confidence            7888876   444 788885 499999999999999999888888643    4566666677776 4565554

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.94  E-value=1.7e-26  Score=186.47  Aligned_cols=147  Identities=22%  Similarity=0.373  Sum_probs=131.1

Q ss_pred             CCCCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHc------CCCeEEecccChHHHHHHHHhCc
Q 016648          179 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT------GMPAVFTGMLLGEELSQAYASGD  252 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~------~~~i~~~g~~~~~~~~~~~~~ad  252 (385)
                      ++++++|+|+|++.+.||++.++++++.+++++++++|.++..+.+++.+.      ..+|++.|+++++++..+|+.||
T Consensus        20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad   99 (177)
T 2f9f_A           20 KCYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK   99 (177)
T ss_dssp             CCCCSCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred             CCCCCEEEEEeccccccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence            456788999999999999999999999999999999998877666665554      34899999999999999999999


Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHH-HHHHHHH
Q 016648          253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL-RETMGQA  329 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~-~~~~~~~  329 (385)
                      ++|+|+..|++|++++|||+||+|||+++.++..+++   .++.+|+++ ++|+++++++|.++++|++. +++++++
T Consensus       100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i---~~~~~g~~~-~~d~~~l~~~i~~l~~~~~~~~~~~~~~  173 (177)
T 2f9f_A          100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLV-NADVNEIIDAMKKVSKNPDKFKKDCFRR  173 (177)
T ss_dssp             EEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEE-CSCHHHHHHHHHHHHHCTTTTHHHHHHH
T ss_pred             EEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHh---cCCCccEEe-CCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999   888899999 88999999999999998874 3333333

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.93  E-value=1.6e-25  Score=202.11  Aligned_cols=244  Identities=14%  Similarity=0.094  Sum_probs=178.6

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  130 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  130 (385)
                      ....+.+++++.+||+||++....+..  + +....+ |+++..+....    .           .+.+.+++.+|.+++
T Consensus        99 ~~~~l~~~l~~~~pDiv~~~~~~~~~~--~-~~~~~~-p~~~~~~~~~~----~-----------~~~~~~~~~~d~ii~  159 (374)
T 2xci_A           99 NPFSVKRFEELSKPKALIVVEREFWPS--L-IIFTKV-PKILVNAYAKG----S-----------LIEKILSKKFDLIIM  159 (374)
T ss_dssp             SHHHHHHHHHHHCCSEEEEESCCCCHH--H-HHHCCS-CEEEEEECCCC----C-----------HHHHHHHTTCSEEEE
T ss_pred             CHHHHHHHHHHhCCCEEEEECccCcHH--H-HHHHhC-CEEEEEeecCc----h-----------HHHHHHHHhCCEEEE
Confidence            457889999999999999865433221  1 112223 87665443211    0           055677899999999


Q ss_pred             cChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC---
Q 016648          131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  207 (385)
Q Consensus       131 ~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~---  207 (385)
                      .|+..++.+.+.+ .+  ++.+++|+..    .+....   ..    .. ..+++++.|+  ..||++.+++|++.+   
T Consensus       160 ~S~~~~~~l~~~g-~~--ki~vi~n~~f----~~~~~~---~~----~l-~~~vi~~~~~--~~k~~~~ll~A~~~l~~~  222 (374)
T 2xci_A          160 RTQEDVEKFKTFG-AK--RVFSCGNLKF----ICQKGK---GI----KL-KGEFIVAGSI--HTGEVEIILKAFKEIKKT  222 (374)
T ss_dssp             SCHHHHHHHHTTT-CC--SEEECCCGGG----CCCCCS---CC----CC-SSCEEEEEEE--CGGGHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHcC-CC--eEEEcCCCcc----CCCcCh---hh----hh-cCCEEEEEeC--CCchHHHHHHHHHHHHhh
Confidence            9999999998874 33  8999999731    111110   00    01 1256666664  468999999998765   


Q ss_pred             -CCceEEEEeCCccH-HHHHHHHcCC------------CeEEecccChHHHHHHHHhCcEEEEcCC-CCCCcHHHHHHHh
Q 016648          208 -PEARIAFIGDGPYR-EELEKMFTGM------------PAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMS  272 (385)
Q Consensus       208 -~~~~l~i~G~g~~~-~~l~~~~~~~------------~i~~~g~~~~~~~~~~~~~adi~v~ps~-~e~~~~~~~Ea~a  272 (385)
                       |+++++|+|+|+.. +.+++++.+.            ++.+.|+.  +|+..+|+.||++++|+. .+++|.+++|||+
T Consensus       223 ~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA  300 (374)
T 2xci_A          223 YSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPTC  300 (374)
T ss_dssp             CTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHT
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHHH
Confidence             68999999998876 4677766543            35666655  899999999999888765 4678899999999


Q ss_pred             cCCcEEEe-cCCCCCcccccCCC-CCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh
Q 016648          273 SGIPVVGV-RAGGIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  336 (385)
Q Consensus       273 ~G~PvI~s-~~~~~~e~~~~~~~-~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~  336 (385)
                      ||+|||++ +.++.++.+   .+ ..+|.++.++|+++|+++|.++++| +.+++|++++++.+++
T Consensus       301 ~G~PVI~~~~~~~~~e~~---~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~  362 (374)
T 2xci_A          301 WGIPVIYGPYTHKVNDLK---EFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKGC  362 (374)
T ss_dssp             TTCCEEECSCCTTSHHHH---HHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred             hCCCEEECCCccChHHHH---HHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence            99999975 678888877   43 2467777788999999999999999 9999999999998754

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.89  E-value=1.4e-22  Score=184.20  Aligned_cols=275  Identities=16%  Similarity=0.139  Sum_probs=187.1

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeE
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  128 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  128 (385)
                      .....++.+++++.+||+|++++.....+++.+.++..++|++....+.. . ...+ ..+   ........+.+.+|.+
T Consensus       100 ~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr-s-~~~~-~~~---p~~~~r~~~~~~a~~~  173 (403)
T 3ot5_A          100 SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR-T-WNKY-SPF---PEEMNRQLTGVMADIH  173 (403)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC-C-SCTT-SST---THHHHHHHHHHHCSEE
T ss_pred             HHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-c-cccc-cCC---cHHHHHHHHHHhcCEE
Confidence            34567888999999999999998756666666778889999753222210 0 0000 000   0112334455669999


Q ss_pred             EEcChhHHHHHHHhcccCCCcEEEeeCC-CCCCCCCCCC-CChhhHhhhcCCCCCCcEEEEEeeccc-cccHHHHHHHHH
Q 016648          129 LVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFLKRVMD  205 (385)
Q Consensus       129 i~~s~~~~~~~~~~~~~~~~~i~vi~~~-v~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~-~k~~~~l~~a~~  205 (385)
                      +++|+..++.+.+.+. +++++.+++|+ +|...+.+.. .....+.++   .+++.++++.|+... .++++.++++++
T Consensus       174 ~~~se~~~~~l~~~Gi-~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~~l~~ll~a~~  249 (403)
T 3ot5_A          174 FSPTKQAKENLLAEGK-DPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLGEPMQGMFEAVR  249 (403)
T ss_dssp             EESSHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHTTHHHHHHHHHH
T ss_pred             ECCCHHHHHHHHHcCC-CcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccCcHHHHHHHHHH
Confidence            9999999999998764 67889999985 3432221111 111222222   233444556666433 467888888886


Q ss_pred             hC----CCceEEEE-eCCc-cHHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          206 RL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       206 ~~----~~~~l~i~-G~g~-~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      .+    +++++++. |.++ ..+.+++... ..++.+.+++++.++..+|+.||++|.+|     |...+||+++|+|+|
T Consensus       250 ~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV  324 (403)
T 3ot5_A          250 EIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVL  324 (403)
T ss_dssp             HHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEE
T ss_pred             HHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEE
Confidence            54    78888886 4443 3445555333 34799999999899999999999999887     444589999999999


Q ss_pred             Ee-cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          279 GV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       279 ~s-~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      ++ +.++.++.+   +.| +++++.. |.+++++++.++++|++.+++|++++..    |.....++++.
T Consensus       325 ~~~~~~~~~e~v---~~g-~~~lv~~-d~~~l~~ai~~ll~~~~~~~~m~~~~~~----~g~~~aa~rI~  385 (403)
T 3ot5_A          325 VLRDTTERPEGI---EAG-TLKLIGT-NKENLIKEALDLLDNKESHDKMAQAANP----YGDGFAANRIL  385 (403)
T ss_dssp             ECCSSCSCHHHH---HHT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHHHSCCT----TCCSCHHHHHH
T ss_pred             EecCCCcchhhe---eCC-cEEEcCC-CHHHHHHHHHHHHcCHHHHHHHHhhcCc----ccCCcHHHHHH
Confidence            98 677777777   555 7787765 9999999999999999998888765543    44344444444

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.89  E-value=5.2e-23  Score=186.91  Aligned_cols=277  Identities=16%  Similarity=0.105  Sum_probs=186.6

Q ss_pred             ccchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHH-HHHhCCe
Q 016648           49 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF-LHRAADL  127 (385)
Q Consensus        49 ~~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~  127 (385)
                      .....++.+++++.+||+|++++.....+++.+.++..++|++...++.. .+      .+....-....+. +.+.+|.
T Consensus        97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r-s~------~~~~~~~~~~~r~~~~~~a~~  169 (396)
T 3dzc_A           97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR-TG------NIYSPWPEEGNRKLTAALTQY  169 (396)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-CS------CTTSSTTHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-cc------ccccCCcHHHHHHHHHHhcCE
Confidence            34567888999999999999998755556666778889999764322211 10      1000010113333 4678999


Q ss_pred             EEEcChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCC--CC----hhhHhhhcCCCCCCcE-EEEEeec-cccccHH
Q 016648          128 TLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRF--RS----SEMRWRLSNGEPDKPL-IVHVGRL-GVEKSLD  198 (385)
Q Consensus       128 ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~--~~----~~~~~~~~~~~~~~~~-i~~~G~~-~~~k~~~  198 (385)
                      ++++|+..++.+.+.+. +++++.+++|++ |...+.+..  ..    ...+.++....+++.+ +++.++. ...|+++
T Consensus       170 ~~~~se~~~~~l~~~G~-~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~  248 (396)
T 3dzc_A          170 HFAPTDTSRANLLQENY-NAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFE  248 (396)
T ss_dssp             EEESSHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHH
T ss_pred             EECCCHHHHHHHHHcCC-CcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHH
Confidence            99999999999988754 667899999854 322111110  00    1122222211133444 4444453 3347889


Q ss_pred             HHHHHHHhC----CCceEEEE-eCCc-cHHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHH
Q 016648          199 FLKRVMDRL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM  271 (385)
Q Consensus       199 ~l~~a~~~~----~~~~l~i~-G~g~-~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~  271 (385)
                      .++++++.+    +++++++. |.++ ..+.+++... ..++.+.+++.+.++..+|+.||++|.+|   |  ...+||+
T Consensus       249 ~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G--g~~~EA~  323 (396)
T 3dzc_A          249 RICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G--GIQEEAP  323 (396)
T ss_dssp             HHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S--GGGTTGG
T ss_pred             HHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c--cHHHHHH
Confidence            999988765    68888875 5543 3455555433 34799999999899999999999999998   2  3348999


Q ss_pred             hcCCcEEEe-cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          272 SSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       272 a~G~PvI~s-~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      ++|+|+|++ +.++.++.+   +.| .+++++. |++++++++.++++|++.+++|++++..    |.....++++.
T Consensus       324 a~G~PvV~~~~~~~~~e~v---~~G-~~~lv~~-d~~~l~~ai~~ll~d~~~~~~m~~~~~~----~~~~~aa~ri~  391 (396)
T 3dzc_A          324 SLGKPVLVMRETTERPEAV---AAG-TVKLVGT-NQQQICDALSLLLTDPQAYQAMSQAHNP----YGDGKACQRIA  391 (396)
T ss_dssp             GGTCCEEECCSSCSCHHHH---HHT-SEEECTT-CHHHHHHHHHHHHHCHHHHHHHHTSCCT----TCCSCHHHHHH
T ss_pred             HcCCCEEEccCCCcchHHH---HcC-ceEEcCC-CHHHHHHHHHHHHcCHHHHHHHhhccCC----CcCChHHHHHH
Confidence            999999998 677777877   556 4566654 8999999999999999999888876543    44444444444

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.85  E-value=2.3e-19  Score=161.33  Aligned_cols=255  Identities=18%  Similarity=0.179  Sum_probs=171.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ..+..+++++++||+|++++.. ...+..+.++..++|+++.-.+..+.               ...+++.+.++.+++.
T Consensus        81 ~~~~~~~l~~~~PDvVi~~g~~-~s~p~~laA~~~~iP~vihe~n~~~G---------------~~nr~l~~~a~~v~~~  144 (365)
T 3s2u_A           81 LFQALRVIRQLRPVCVLGLGGY-VTGPGGLAARLNGVPLVIHEQNAVAG---------------TANRSLAPIARRVCEA  144 (365)
T ss_dssp             HHHHHHHHHHHCCSEEEECSSS-THHHHHHHHHHTTCCEEEEECSSSCC---------------HHHHHHGGGCSEEEES
T ss_pred             HHHHHHHHHhcCCCEEEEcCCc-chHHHHHHHHHcCCCEEEEecchhhh---------------hHHHhhccccceeeec
Confidence            3456778999999999998753 34455667889999999743332221               1345677889999887


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCc-EEEEEeeccccccHHHHHHHHHhCC--
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP-LIVHVGRLGVEKSLDFLKRVMDRLP--  208 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~G~~~~~k~~~~l~~a~~~~~--  208 (385)
                      .+..       + ...+++.+..|++..+.+.....      +... .++++ ++++.|+.+..+..+.+.+++..++  
T Consensus       145 ~~~~-------~-~~~~k~~~~g~pvr~~~~~~~~~------~~~~-~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~  209 (365)
T 3s2u_A          145 FPDT-------F-PASDKRLTTGNPVRGELFLDAHA------RAPL-TGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE  209 (365)
T ss_dssp             STTS-------S-CC---CEECCCCCCGGGCCCTTS------SCCC-TTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT
T ss_pred             cccc-------c-cCcCcEEEECCCCchhhccchhh------hccc-CCCCcEEEEECCcCCccccchhhHHHHHhcccc
Confidence            6542       2 23457778888887665433221      1111 23344 4556677888788888899998874  


Q ss_pred             -CceEEE-EeCCccHHHHHHHHc--CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC
Q 016648          209 -EARIAF-IGDGPYREELEKMFT--GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  284 (385)
Q Consensus       209 -~~~l~i-~G~g~~~~~l~~~~~--~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~  284 (385)
                       +..++. +|.+ ..+.+.+...  ..++.+.+++  +++.++|+.||++|.-+    .++++.|++++|+|+|..+.+.
T Consensus       210 ~~~~vi~~~G~~-~~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~  282 (365)
T 3s2u_A          210 IRPAIRHQAGRQ-HAEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPH  282 (365)
T ss_dssp             TCCEEEEECCTT-THHHHHHHHHHTTCCCEEESCC--SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC---
T ss_pred             cceEEEEecCcc-ccccccceecccccccccccch--hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCC
Confidence             344444 4444 3344444433  3378899999  89999999999999543    3789999999999999877653


Q ss_pred             C--------CcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          285 I--------PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       285 ~--------~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      .        .+.+   .+...|.+++..  ++++|+++|.++++|++.+++|++++++.......+.+++.++
T Consensus       283 ~~~~~Q~~NA~~l---~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~  352 (365)
T 3s2u_A          283 AIDDHQTRNAEFL---VRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACL  352 (365)
T ss_dssp             --CCHHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHH---HHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence            2        1334   455567777644  5899999999999999999999999987765555555555554

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.83  E-value=7.2e-20  Score=168.00  Aligned_cols=266  Identities=11%  Similarity=0.051  Sum_probs=175.4

Q ss_pred             HHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHH----------
Q 016648           53 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH----------  122 (385)
Q Consensus        53 ~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  122 (385)
                      .++.+.+++++||+|+++.....   +..+++..|+|+|.+.|+.....  .    ........+.+...          
T Consensus       120 ~~l~~~l~~~~pDvVv~~~~~~~---~~~aa~~~giP~v~~~~~~~~~~--~----~~~~~~~~~~~~~~~~g~~~~~~~  190 (412)
T 3otg_A          120 DELQPVIERLRPDLVVQEISNYG---AGLAALKAGIPTICHGVGRDTPD--D----LTRSIEEEVRGLAQRLGLDLPPGR  190 (412)
T ss_dssp             HHHHHHHHHHCCSEEEEETTCHH---HHHHHHHHTCCEEEECCSCCCCS--H----HHHHHHHHHHHHHHHTTCCCCSSC
T ss_pred             HHHHHHHHhcCCCEEEECchhhH---HHHHHHHcCCCEEEecccccCch--h----hhHHHHHHHHHHHHHcCCCCCccc
Confidence            67888999999999999854322   44567889999999877753211  0    01111111222222          


Q ss_pred             --HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhh--cCCCCCCcEEEEEeeccccccHH
Q 016648          123 --RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRL--SNGEPDKPLIVHVGRLGVEKSLD  198 (385)
Q Consensus       123 --~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~G~~~~~k~~~  198 (385)
                        ..+|.+++.++...+........  ....+.+.+.+.     ....    .+.  ....+.+.++++.|+.. .++.+
T Consensus       191 ~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~vlv~~G~~~-~~~~~  258 (412)
T 3otg_A          191 IDGFGNPFIDIFPPSLQEPEFRARP--RRHELRPVPFAE-----QGDL----PAWLSSRDTARPLVYLTLGTSS-GGTVE  258 (412)
T ss_dssp             CGGGGCCEEECSCGGGSCHHHHTCT--TEEECCCCCCCC-----CCCC----CGGGGGSCTTSCEEEEECTTTT-CSCHH
T ss_pred             ccCCCCeEEeeCCHHhcCCcccCCC--CcceeeccCCCC-----CCCC----CCccccccCCCCEEEEEcCCCC-cCcHH
Confidence              36788999888766655443221  111111111110     0000    011  11233456678888885 55555


Q ss_pred             HHHHHHHhC--CCceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC
Q 016648          199 FLKRVMDRL--PEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  275 (385)
Q Consensus       199 ~l~~a~~~~--~~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~  275 (385)
                      .+.++++.+  .+.++++++.+.. .+.++..  ..++.+.|++   ++.++|+.||++|.++    .+++++|||++|+
T Consensus       259 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~--~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~  329 (412)
T 3otg_A          259 VLRAAIDGLAGLDADVLVASGPSLDVSGLGEV--PANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGV  329 (412)
T ss_dssp             HHHHHHHHHHTSSSEEEEECCSSCCCTTCCCC--CTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCCEEEEEECCCCChhhhccC--CCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCC
Confidence            555444433  2567776654432 3333321  3479999998   4888999999999765    3589999999999


Q ss_pred             cEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 016648          276 PVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNE  349 (385)
Q Consensus       276 PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~  349 (385)
                      |+|+.+.++    ..+.+   .+..+|.+++++  |+++++++|.++++|++.++++++.+++..+.++++++++.+. +
T Consensus       330 P~v~~p~~~~q~~~~~~v---~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  405 (412)
T 3otg_A          330 PQLSFPWAGDSFANAQAV---AQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLP-G  405 (412)
T ss_dssp             CEEECCCSTTHHHHHHHH---HHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHH-H
T ss_pred             CEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHH-H
Confidence            999976654    45666   567789999877  8999999999999999999999999999888899999999886 5


Q ss_pred             HHH
Q 016648          350 QYN  352 (385)
Q Consensus       350 iy~  352 (385)
                      ++.
T Consensus       406 l~~  408 (412)
T 3otg_A          406 FAS  408 (412)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            654

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.80  E-value=1.2e-18  Score=160.75  Aligned_cols=277  Identities=14%  Similarity=0.056  Sum_probs=172.9

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcc-ccccc-c---------cccchhHHHHHHH
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY-IPRYT-F---------SWLVKPMWLVIKF  120 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~-~---------~~~~~~~~~~~~~  120 (385)
                      ...+.+.+++.+||+|+++....   .+..+++..|+|++...+...... ..... .         .........+.+.
T Consensus        93 ~~~l~~~l~~~~pD~Vi~d~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (430)
T 2iyf_A           93 LPQLADAYADDIPDLVLHDITSY---PARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAW  169 (430)
T ss_dssp             HHHHHHHHTTSCCSEEEEETTCH---HHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCCCEEEECCccH---HHHHHHHHcCCCEEEEecccccccccccccccchhhhhccchHHHHHHHHHHHH
Confidence            45677788889999999876422   345567788999998776543111 00000 0         0000000111121


Q ss_pred             ------------HHHhCCeEEEcChhHHHHHHHhcccCCCc-EEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEE
Q 016648          121 ------------LHRAADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH  187 (385)
Q Consensus       121 ------------~~~~ad~ii~~s~~~~~~~~~~~~~~~~~-i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  187 (385)
                                  ....+|.+++.+....+.....  .+ .+ +..+.++++.........        ....++..++++
T Consensus       170 ~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-~~~v~~vG~~~~~~~~~~~~~--------~~~~~~~~v~v~  238 (430)
T 2iyf_A          170 LKENGITEHPDTFASHPPRSLVLIPKALQPHADR--VD-EDVYTFVGACQGDRAEEGGWQ--------RPAGAEKVVLVS  238 (430)
T ss_dssp             HHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGG--SC-TTTEEECCCCC-----CCCCC--------CCTTCSEEEEEE
T ss_pred             HHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCccc--CC-CccEEEeCCcCCCCCCCCCCc--------cccCCCCeEEEE
Confidence                        2224788888876554332211  12 24 666666554221000000        001234567888


Q ss_pred             Eeecccccc---HHHHHHHHHhCCCceE-EEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCC
Q 016648          188 VGRLGVEKS---LDFLKRVMDRLPEARI-AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETL  263 (385)
Q Consensus       188 ~G~~~~~k~---~~~l~~a~~~~~~~~l-~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~  263 (385)
                      +|++. .++   +..++++++.++++++ +++|++...+.++.  ...++.+.|++++.   ++|+.||++|..+    .
T Consensus       239 ~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~--~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G  308 (430)
T 2iyf_A          239 LGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGE--LPDNVEVHDWVPQL---AILRQADLFVTHA----G  308 (430)
T ss_dssp             CTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCS--CCTTEEEESSCCHH---HHHTTCSEEEECC----C
T ss_pred             cCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhcc--CCCCeEEEecCCHH---HHhhccCEEEECC----C
Confidence            99987 333   5556666665556777 46787765444432  13479999999754   6899999999754    3


Q ss_pred             cHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhC
Q 016648          264 GLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKY  337 (385)
Q Consensus       264 ~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~  337 (385)
                      .++++|||++|+|+|+++.++    ..+.+   .+...|+.++.+  |+++++++|.++++|++.++++++.+++..+.+
T Consensus       309 ~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  385 (430)
T 2iyf_A          309 AGGSQEGLATATPMIAVPQAVDQFGNADML---QGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEG  385 (430)
T ss_dssp             HHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHhCCCEEECCCccchHHHHHHH---HHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence            579999999999999997654    34455   456788888876  899999999999999999999999988887778


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 016648          338 DWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       338 s~~~~~~~~~~~iy~~~~~  356 (385)
                      +++.+++.+. .++++...
T Consensus       386 ~~~~~~~~i~-~~~~~~~~  403 (430)
T 2iyf_A          386 GTRRAADLIE-AELPARHE  403 (430)
T ss_dssp             HHHHHHHHHH-TTSCC---
T ss_pred             cHHHHHHHHH-HHhhcccc
Confidence            9999998886 57765543

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.78  E-value=6.3e-19  Score=158.74  Aligned_cols=276  Identities=14%  Similarity=0.120  Sum_probs=178.3

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ....++.+++++++||+|++++.....++ .+.++..++|++....+...     ....+   .-......+-+.+|.++
T Consensus        81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~a-alaA~~~~IPv~h~eaglrs-----~~~~~---pee~nR~~~~~~a~~~~  151 (385)
T 4hwg_A           81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLS-AIAAKRRKIPIFHMEAGNRC-----FDQRV---PEEINRKIIDHISDVNI  151 (385)
T ss_dssp             HHHHHHHHHHHHHCCSEEEEESCSGGGGG-HHHHHHTTCCEEEESCCCCC-----SCTTS---THHHHHHHHHHHCSEEE
T ss_pred             HHHHHHHHHHHhcCCcEEEEECCchHHHH-HHHHHHhCCCEEEEeCCCcc-----ccccC---cHHHHHHHHHhhhceee
Confidence            45678889999999999999986444444 56778899997543222211     00000   11112334456789999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCC-CCCCChhhHhhhcCCCCCCcEEEEEeec---cccccHHHHHHHH
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRL---GVEKSLDFLKRVM  204 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~G~~---~~~k~~~~l~~a~  204 (385)
                      ++++..++.+.+.+. +++++.+++|.. |...+. +.......+.++.. .+++.+++..|+.   +..++++.+++++
T Consensus       152 ~~te~~~~~l~~~G~-~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al  229 (385)
T 4hwg_A          152 TLTEHARRYLIAEGL-PAELTFKSGSHMPEVLDRFMPKILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSL  229 (385)
T ss_dssp             ESSHHHHHHHHHTTC-CGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHcCC-CcCcEEEECCchHHHHHHhhhhcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHH
Confidence            999999999988764 667899999854 322111 00011122333332 2244455556654   3347788999998


Q ss_pred             HhCC---CceEEEEeCCccHHHHHHH---Hc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          205 DRLP---EARIAFIGDGPYREELEKM---FT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       205 ~~~~---~~~l~i~G~g~~~~~l~~~---~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      .++.   ++.+++.......+.+++.   .. ..++.+.+++++.++..+|+.||+++.+|     |....||+++|+|+
T Consensus       230 ~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pv  304 (385)
T 4hwg_A          230 QMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPA  304 (385)
T ss_dssp             HHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCE
T ss_pred             HHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCE
Confidence            7762   5776665443333444443   22 23799999998889999999999999776     44679999999999


Q ss_pred             EEecCCC-CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHH-HHhCCHHHHHHHH
Q 016648          278 VGVRAGG-IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDWRAATRTI  346 (385)
Q Consensus       278 I~s~~~~-~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~-~~~~s~~~~~~~~  346 (385)
                      |+..... .+|.+   +.| ++.++.. |.+++++++.++++|++.++.|++++..+ ....+-+++++.+
T Consensus       305 v~~~~~ter~e~v---~~G-~~~lv~~-d~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l  370 (385)
T 4hwg_A          305 LNIREAHERPEGM---DAG-TLIMSGF-KAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIV  370 (385)
T ss_dssp             EECSSSCSCTHHH---HHT-CCEECCS-SHHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHH
T ss_pred             EEcCCCccchhhh---hcC-ceEEcCC-CHHHHHHHHHHHHhChHHHHHhhccCCCCCCCChHHHHHHHHH
Confidence            9875533 45666   444 5566643 89999999999999987776665555444 3334444444444

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.75  E-value=1.3e-17  Score=152.30  Aligned_cols=155  Identities=15%  Similarity=0.110  Sum_probs=110.7

Q ss_pred             CCCcEEEEEeeccc----------cccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHH
Q 016648          180 PDKPLIVHVGRLGV----------EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYA  249 (385)
Q Consensus       180 ~~~~~i~~~G~~~~----------~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~  249 (385)
                      +.+.+++++|++..          .+.+..+++++..+ +.++++++++...+.+..+  ..++++.|+++   +.++|.
T Consensus       226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~---~~~ll~  299 (398)
T 4fzr_A          226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-GFEVVVAVSDKLAQTLQPL--PEGVLAAGQFP---LSAIMP  299 (398)
T ss_dssp             SSCEEECC----------------CCSHHHHHHHGGGG-TCEEEECCCC--------C--CTTEEEESCCC---HHHHGG
T ss_pred             CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-CCEEEEEeCCcchhhhccC--CCcEEEeCcCC---HHHHHh
Confidence            45567888899854          44578888888776 6888888877654444432  45899999984   667799


Q ss_pred             hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC----CCCCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHH
Q 016648          250 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELR  323 (385)
Q Consensus       250 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~----~~~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~  323 (385)
                      .||++|.    .+.+++++|||++|+|+|+.+.    .+..+.+   .+...|.+++.+  |++++++++.++++|++.+
T Consensus       300 ~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~  372 (398)
T 4fzr_A          300 ACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL---HAAGAGVEVPWEQAGVESVLAACARIRDDSSYV  372 (398)
T ss_dssp             GCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred             hCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence            9999994    4457899999999999999544    3555666   667789998876  7899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          324 ETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       324 ~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      +++++.+++..+..+++.+++.+.
T Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          373 GNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             HHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHh
Confidence            999999988888899999888763

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.72  E-value=5.6e-16  Score=141.52  Aligned_cols=274  Identities=13%  Similarity=0.074  Sum_probs=169.0

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccc---------c-cc-ccchhHHHHHHH
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY---------T-FS-WLVKPMWLVIKF  120 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---------~-~~-~~~~~~~~~~~~  120 (385)
                      ...+.+.+++.+||+|+++++  ....+..+++..|+|++...++.........         . .. ........+.+.
T Consensus        91 ~~~l~~~l~~~~pD~Vi~d~~--~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (402)
T 3ia7_A           91 LRAAEEALGDNPPDLVVYDVF--PFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVLVDL  168 (402)
T ss_dssp             HHHHHHHHTTCCCSEEEEEST--THHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGGGSHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCEEEECch--HHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChhhHHHHHHHHHHH
Confidence            456778888999999999742  2233455678899999988766543211000         0 00 000001111111


Q ss_pred             H------------HHhC-CeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEE
Q 016648          121 L------------HRAA-DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH  187 (385)
Q Consensus       121 ~------------~~~a-d~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  187 (385)
                      .            .... |..++......+......   ..++.++...+......+...        ....+.+.++++
T Consensus       169 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~~~~~~--------~~~~~~~~v~v~  237 (402)
T 3ia7_A          169 LGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTGRDGQPGWQ--------PPRPDAPVLLVS  237 (402)
T ss_dssp             HHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC----CCCC--------CSSTTCCEEEEE
T ss_pred             HHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCCcccCCCCc--------ccCCCCCEEEEE
Confidence            1            1111 555555544433322221   234555543322110000000        001334567888


Q ss_pred             Eeeccccc--cHHHHHHHHHhCCCceEEE-EeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCc
Q 016648          188 VGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  264 (385)
Q Consensus       188 ~G~~~~~k--~~~~l~~a~~~~~~~~l~i-~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~  264 (385)
                      .|+....+  .+..++++++..+ .++++ +|.+...+.+..  ...++++.|++++.   ++|+.||++|..+    ..
T Consensus       238 ~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~--~~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~  307 (402)
T 3ia7_A          238 LGNQFNEHPEFFRACAQAFADTP-WHVVMAIGGFLDPAVLGP--LPPNVEAHQWIPFH---SVLAHARACLTHG----TT  307 (402)
T ss_dssp             CCSCSSCCHHHHHHHHHHHTTSS-CEEEEECCTTSCGGGGCS--CCTTEEEESCCCHH---HHHTTEEEEEECC----CH
T ss_pred             CCCCCcchHHHHHHHHHHHhcCC-cEEEEEeCCcCChhhhCC--CCCcEEEecCCCHH---HHHhhCCEEEECC----CH
Confidence            89886655  4667777777765 55555 666544443332  23489999999655   8899999999654    35


Q ss_pred             HHHHHHHhcCCcEEEecC-----CCCCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhC
Q 016648          265 LVVLEAMSSGIPVVGVRA-----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKY  337 (385)
Q Consensus       265 ~~~~Ea~a~G~PvI~s~~-----~~~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~  337 (385)
                      ++++||+++|+|+|+...     ....+.+   .+...|..+..+  +++++++++.++++|++.++++++.+++..+..
T Consensus       308 ~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~  384 (402)
T 3ia7_A          308 GAVLEAFAAGVPLVLVPHFATEAAPSAERV---IELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSSG  384 (402)
T ss_dssp             HHHHHHHHTTCCEEECGGGCGGGHHHHHHH---HHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHhCCCEEEeCCCcccHHHHHHHH---HHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCC
Confidence            789999999999997654     2445555   566788888766  899999999999999999999988888777778


Q ss_pred             CHHHHHHHHHHHHHH
Q 016648          338 DWRAATRTIRNEQYN  352 (385)
Q Consensus       338 s~~~~~~~~~~~iy~  352 (385)
                      +.+..++.+. .+++
T Consensus       385 ~~~~~~~~i~-~~~~  398 (402)
T 3ia7_A          385 GPARAADEVE-AYLG  398 (402)
T ss_dssp             HHHHHHHHHH-HHHH
T ss_pred             hHHHHHHHHH-HHHh
Confidence            8888888775 4543

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.70  E-value=6.9e-17  Score=147.05  Aligned_cols=262  Identities=12%  Similarity=0.097  Sum_probs=163.4

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHh-------
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA-------  124 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  124 (385)
                      ...+.+++++.+||+||++..   .+.+...++..|+|++...|+......  .   .......++.+...+.       
T Consensus       103 ~~~l~~~l~~~~PD~Vv~~~~---~~~~~~aa~~~giP~v~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~  174 (391)
T 3tsa_A          103 LPEYLRLAEAWRPSVLLVDVC---ALIGRVLGGLLDLPVVLHRWGVDPTAG--P---FSDRAHELLDPVCRHHGLTGLPT  174 (391)
T ss_dssp             HHHHHHHHHHHCCSEEEEETT---CHHHHHHHHHTTCCEEEECCSCCCTTT--H---HHHHHHHHHHHHHHHTTSSSSCC
T ss_pred             HHHHHHHHHhcCCCEEEeCcc---hhHHHHHHHHhCCCEEEEecCCccccc--c---ccchHHHHHHHHHHHcCCCCCCC
Confidence            557788899999999999753   233445678899999987776532111  0   0001111111111111       


Q ss_pred             CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccc-c----HHH
Q 016648          125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK-S----LDF  199 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k-~----~~~  199 (385)
                      .+.++.......+......   ...+..+|          ...............+.+.++++.|+....+ +    +..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~---~~~~~~~p----------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~  241 (391)
T 3tsa_A          175 PELILDPCPPSLQASDAPQ---GAPVQYVP----------YNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRA  241 (391)
T ss_dssp             CSEEEECSCGGGSCTTSCC---CEECCCCC----------CCCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHH
T ss_pred             CceEEEecChhhcCCCCCc---cCCeeeec----------CCCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHH
Confidence            1444544433221111000   00111111          0000000000111123445677778885432 2    556


Q ss_pred             HHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          200 LKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       200 l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                      ++++ +.+|++++++.|++...+.+...  ..++++.|+++..++   +..||++|.    .+.+++++|||++|+|+|+
T Consensus       242 ~~~~-~~~p~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~~~~l---l~~ad~~v~----~~G~~t~~Ea~~~G~P~v~  311 (391)
T 3tsa_A          242 VAAA-TELPGVEAVIAVPPEHRALLTDL--PDNARIAESVPLNLF---LRTCELVIC----AGGSGTAFTATRLGIPQLV  311 (391)
T ss_dssp             HHHH-HTSTTEEEEEECCGGGGGGCTTC--CTTEEECCSCCGGGT---GGGCSEEEE----CCCHHHHHHHHHTTCCEEE
T ss_pred             HHHh-ccCCCeEEEEEECCcchhhcccC--CCCEEEeccCCHHHH---HhhCCEEEe----CCCHHHHHHHHHhCCCEEe
Confidence            6677 77788999999877654443321  348999999976554   699999995    3456799999999999999


Q ss_pred             ecC----CCCCcccccCCCCCeeEeeCC----CCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          280 VRA----GGIPDIIPEDQDGKIGYLFNP----GDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       280 s~~----~~~~e~~~~~~~~~~g~~~~~----~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      ...    ....+.+   .+...|..+++    .|++++++++.++++|++.++++++.+++..+..+++.+++.+.
T Consensus       312 ~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  384 (391)
T 3tsa_A          312 LPQYFDQFDYARNL---AAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLE  384 (391)
T ss_dssp             CCCSTTHHHHHHHH---HHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred             cCCcccHHHHHHHH---HHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            654    2344556   56778999887    68999999999999999999999998888888899998888775

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.69  E-value=1.5e-15  Score=139.26  Aligned_cols=274  Identities=12%  Similarity=0.029  Sum_probs=164.5

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccc---------c-cc-ccchhHHHHHHH
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY---------T-FS-WLVKPMWLVIKF  120 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---------~-~~-~~~~~~~~~~~~  120 (385)
                      ...+.+.+++.+||+|+++++  ..+.+..+++..|+|++...++.........         . .. ........+.+.
T Consensus       107 ~~~l~~~l~~~~PDlVi~d~~--~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  184 (415)
T 3rsc_A          107 LRATAEALDGDVPDLVLYDDF--PFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDL  184 (415)
T ss_dssp             HHHHHHHHSSSCCSEEEEEST--THHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHTCCCGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCEEEECch--hhhHHHHHHHHhCCCEEEEEecccccCccccccccccccccCChhhHHHHHHHHHHH
Confidence            456778888999999998633  2233455678899999998876542211000         0 00 000001111111


Q ss_pred             HHHh-------------CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEE
Q 016648          121 LHRA-------------ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH  187 (385)
Q Consensus       121 ~~~~-------------ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  187 (385)
                      ....             +|..++......+......   ..++..+...+......+.        -.....+.+.++++
T Consensus       185 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~~~~--------~~~~~~~~~~v~v~  253 (415)
T 3rsc_A          185 LAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF---DDRFVFVGPCFDDRRFLGE--------WTRPADDLPVVLVS  253 (415)
T ss_dssp             HHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC---CTTEEECCCCCCCCGGGCC--------CCCCSSCCCEEEEE
T ss_pred             HHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC---CCceEEeCCCCCCcccCcC--------ccccCCCCCEEEEE
Confidence            1111             1555554443332222111   2234443222211000000        00011234566778


Q ss_pred             Eeeccccc--cHHHHHHHHHhCCCceEEE-EeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCc
Q 016648          188 VGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  264 (385)
Q Consensus       188 ~G~~~~~k--~~~~l~~a~~~~~~~~l~i-~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~  264 (385)
                      .|+.....  .+..++++++.++ +++++ +|.+...+.++.+  ..++.+.+++++.   ++|..||++|..+    ..
T Consensus       254 ~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~~~l~~~--~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~  323 (415)
T 3rsc_A          254 LGTTFNDRPGFFRDCARAFDGQP-WHVVMTLGGQVDPAALGDL--PPNVEAHRWVPHV---KVLEQATVCVTHG----GM  323 (415)
T ss_dssp             CTTTSCCCHHHHHHHHHHHTTSS-CEEEEECTTTSCGGGGCCC--CTTEEEESCCCHH---HHHHHEEEEEESC----CH
T ss_pred             CCCCCCChHHHHHHHHHHHhcCC-cEEEEEeCCCCChHHhcCC--CCcEEEEecCCHH---HHHhhCCEEEECC----cH
Confidence            88875443  3667777777766 77776 5655444433321  3489999999755   7799999999654    35


Q ss_pred             HHHHHHHhcCCcEEEecC----CCCCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCC
Q 016648          265 LVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  338 (385)
Q Consensus       265 ~~~~Ea~a~G~PvI~s~~----~~~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s  338 (385)
                      .+++||+++|+|+|+...    ....+.+   .+...|..+..+  +++++++++.++++|++.++++++.+++..+..+
T Consensus       324 ~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  400 (415)
T 3rsc_A          324 GTLMEALYWGRPLVVVPQSFDVQPMARRV---DQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRAGG  400 (415)
T ss_dssp             HHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHhCCCEEEeCCcchHHHHHHHH---HHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCH
Confidence            789999999999998543    2344555   455678777765  8999999999999999999999888888777788


Q ss_pred             HHHHHHHHHHHHHH
Q 016648          339 WRAATRTIRNEQYN  352 (385)
Q Consensus       339 ~~~~~~~~~~~iy~  352 (385)
                      .+.+++.+. .+++
T Consensus       401 ~~~~~~~i~-~~~~  413 (415)
T 3rsc_A          401 AARAADAVE-AYLA  413 (415)
T ss_dssp             HHHHHHHHH-HHHH
T ss_pred             HHHHHHHHH-HHhh
Confidence            888888775 4443

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.67  E-value=2.2e-15  Score=136.78  Aligned_cols=260  Identities=15%  Similarity=0.107  Sum_probs=160.3

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHh-------
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA-------  124 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  124 (385)
                      ..++.+.+++.+||+|+++....   .+..+++..|+|++...|+...  ...    ..........+...+.       
T Consensus        96 ~~~l~~~l~~~~pD~Vi~~~~~~---~~~~~a~~~giP~v~~~~~~~~--~~~----~~~~~~~~~~~~~~~~g~~~~~~  166 (384)
T 2p6p_A           96 LPRMLDFSRAWRPDLIVGGTMSY---VAPLLALHLGVPHARQTWDAVD--ADG----IHPGADAELRPELSELGLERLPA  166 (384)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCT---HHHHHHHHHTCCEEEECCSSCC--CTT----THHHHHHHTHHHHHHTTCSSCCC
T ss_pred             HHHHHHHHhccCCcEEEECcchh---hHHHHHHhcCCCEEEeccCCcc--cch----hhHHHHHHHHHHHHHcCCCCCCC
Confidence            44566778889999999986422   2445677889999987665321  100    0000001111111111       


Q ss_pred             CCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccc-------ccH
Q 016648          125 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE-------KSL  197 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~-------k~~  197 (385)
                      ++.+++.+....+....   .+..++..++  .+     ......+.   .....+...+++++|++...       +.+
T Consensus       167 ~~~~l~~~~~~~~~~~~---~~~~~~~~~~--~~-----~~~~~~~~---l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~  233 (384)
T 2p6p_A          167 PDLFIDICPPSLRPANA---APARMMRHVA--TS-----RQCPLEPW---MYTRDTRQRVLVTSGSRVAKESYDRNFDFL  233 (384)
T ss_dssp             CSEEEECSCGGGSCTTS---CCCEECCCCC--CC-----CCCBCCHH---HHCCCSSCEEEEECSSSSSCCSSCCCCTTH
T ss_pred             CCeEEEECCHHHCCCCC---CCCCceEecC--CC-----CCCCCCch---hhcCCCCCEEEEECCCCCccccccccHHHH
Confidence            56677666543221100   0111111111  10     00000110   11112345678899998764       678


Q ss_pred             HHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          198 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       198 ~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      ..+++++... ++++++++++...+.++..  ..++.+ |+++.   .++|..||++|..    +.+++++|||++|+|+
T Consensus       234 ~~~~~al~~~-~~~~~~~~g~~~~~~l~~~--~~~v~~-~~~~~---~~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~  302 (384)
T 2p6p_A          234 RGLAKDLVRW-DVELIVAAPDTVAEALRAE--VPQARV-GWTPL---DVVAPTCDLLVHH----AGGVSTLTGLSAGVPQ  302 (384)
T ss_dssp             HHHHHHHHTT-TCEEEEECCHHHHHHHHHH--CTTSEE-ECCCH---HHHGGGCSEEEEC----SCTTHHHHHHHTTCCE
T ss_pred             HHHHHHHhcC-CcEEEEEeCCCCHHhhCCC--CCceEE-cCCCH---HHHHhhCCEEEeC----CcHHHHHHHHHhCCCE
Confidence            8899999876 6788876654433444332  458999 99964   4568999999975    3467899999999999


Q ss_pred             EEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          278 VGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       278 I~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      |+.+..+    ..+.+   .+...|..++..  +.++++++|.++++|++.++++++.+++....-..+.+++.+.
T Consensus       303 v~~p~~~dq~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  375 (384)
T 2p6p_A          303 LLIPKGSVLEAPARRV---ADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALE  375 (384)
T ss_dssp             EECCCSHHHHHHHHHH---HHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred             EEccCcccchHHHHHH---HHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence            9987643    44555   455678887754  7999999999999999988888888877766667777666554

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.64  E-value=1.4e-15  Score=138.79  Aligned_cols=261  Identities=15%  Similarity=0.080  Sum_probs=158.1

Q ss_pred             cchHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccc-cccccccchhHHHHHHHHH--HhCC
Q 016648           50 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP-RYTFSWLVKPMWLVIKFLH--RAAD  126 (385)
Q Consensus        50 ~~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~ad  126 (385)
                      .....+.+.+++++||+|+++..   .+.+.++++..|+|++...++....... .....+..   ....+..+  ...+
T Consensus       117 ~~~~~l~~~l~~~~pDlVv~d~~---~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~  190 (398)
T 3oti_A          117 PLVDGTMALVDDYRPDLVVYEQG---ATVGLLAADRAGVPAVQRNQSAWRTRGMHRSIASFLT---DLMDKHQVSLPEPV  190 (398)
T ss_dssp             GGHHHHHHHHHHHCCSEEEEETT---CHHHHHHHHHHTCCEEEECCTTCCCTTHHHHHHTTCH---HHHHHTTCCCCCCS
T ss_pred             HHHHHHHHHHHHcCCCEEEECch---hhHHHHHHHHcCCCEEEEeccCCCccchhhHHHHHHH---HHHHHcCCCCCCCC
Confidence            34567889999999999998533   2234556788999999877664211100 00000000   00111100  0113


Q ss_pred             eEEEcChhHHHHHHHhcccCCCcEEEee-CCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccc----cccHHHHH
Q 016648          127 LTLVPSVAIGKDLEAARVTAANKIRIWK-KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV----EKSLDFLK  201 (385)
Q Consensus       127 ~ii~~s~~~~~~~~~~~~~~~~~i~vi~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~----~k~~~~l~  201 (385)
                      ..+...+.......   ......+..++ ++-           .....-.....+.+.+++++|++..    .+.+..++
T Consensus       191 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~  256 (398)
T 3oti_A          191 ATIESFPPSLLLEA---EPEGWFMRWVPYGGG-----------AVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPII  256 (398)
T ss_dssp             EEECSSCGGGGTTS---CCCSBCCCCCCCCCC-----------EECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHH
T ss_pred             eEEEeCCHHHCCCC---CCCCCCccccCCCCC-----------cCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHH
Confidence            34433332111100   00001111111 110           0000000111334567788899843    34566777


Q ss_pred             HHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe-
Q 016648          202 RVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-  280 (385)
Q Consensus       202 ~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s-  280 (385)
                      ++++.. ++++++++++...+.+...  ..++.+.|+++   +.++|..||++|.    .+.+++++|||++|+|+|+. 
T Consensus       257 ~~l~~~-~~~~v~~~g~~~~~~l~~~--~~~v~~~~~~~---~~~ll~~ad~~v~----~~G~~t~~Eal~~G~P~v~~p  326 (398)
T 3oti_A          257 AAAGEV-DADFVLALGDLDISPLGTL--PRNVRAVGWTP---LHTLLRTCTAVVH----HGGGGTVMTAIDAGIPQLLAP  326 (398)
T ss_dssp             HHHHTS-SSEEEEECTTSCCGGGCSC--CTTEEEESSCC---HHHHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECC
T ss_pred             HHHHcC-CCEEEEEECCcChhhhccC--CCcEEEEccCC---HHHHHhhCCEEEE----CCCHHHHHHHHHhCCCEEEcC
Confidence            777765 6889998877654433322  34899999984   5567889999995    34568999999999999994 


Q ss_pred             ---cCCCCC--cccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          281 ---RAGGIP--DIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       281 ---~~~~~~--e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                         +.....  +.+   .+...|+.++..  +.+.++    ++++|++.++++++.+++..+..+++.+++.+.
T Consensus       327 ~~~dq~~~a~~~~~---~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  393 (398)
T 3oti_A          327 DPRDQFQHTAREAV---SRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVREEMVALPTPAETVRRIV  393 (398)
T ss_dssp             CTTCCSSCTTHHHH---HHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred             CCchhHHHHHHHHH---HHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence               456666  777   667789888765  555555    788899999999999988888899999988875

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.54  E-value=1.3e-13  Score=127.36  Aligned_cols=154  Identities=12%  Similarity=0.025  Sum_probs=114.7

Q ss_pred             CCcEEEEEeeccc-----cccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEE
Q 016648          181 DKPLIVHVGRLGV-----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       181 ~~~~i~~~G~~~~-----~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ...+++++|+...     .+.+..+++++... ++++++.+.+...+.++.  ...++.+.+++++.   ++|..||++|
T Consensus       267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~g~~~~~~l~~--~~~~v~~~~~~~~~---~ll~~ad~~V  340 (441)
T 2yjn_A          267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV-DAEIIATFDAQQLEGVAN--IPDNVRTVGFVPMH---ALLPTCAATV  340 (441)
T ss_dssp             SCEEEEEC----------CCSTTTTHHHHHTS-SSEEEECCCTTTTSSCSS--CCSSEEECCSCCHH---HHGGGCSEEE
T ss_pred             CCEEEEECCCCcccccChHHHHHHHHHHHHcC-CCEEEEEECCcchhhhcc--CCCCEEEecCCCHH---HHHhhCCEEE
Confidence            3457888998865     37888899999876 688888765544332221  13489999999764   4689999999


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  329 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~  329 (385)
                      ..    +.+++++||+++|+|+|+.+..+    ..+.+   .+...|+.++..  ++++++++|.++++|++.++++++.
T Consensus       341 ~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~  413 (441)
T 2yjn_A          341 HH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT---QEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARM  413 (441)
T ss_dssp             EC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH---HHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            63    44689999999999999987642    34455   456678888765  8999999999999999998888888


Q ss_pred             HHHHHHhCCHHHHHHHHH
Q 016648          330 ARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       330 a~~~~~~~s~~~~~~~~~  347 (385)
                      +++.....+.+.+++.+.
T Consensus       414 ~~~~~~~~~~~~~~~~i~  431 (441)
T 2yjn_A          414 RDDMLAEPSPAEVVGICE  431 (441)
T ss_dssp             HHHHHTSCCHHHHHHHHH
T ss_pred             HHHHHcCCCHHHHHHHHH
Confidence            887777788888887775

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.45  E-value=7.5e-12  Score=114.97  Aligned_cols=154  Identities=12%  Similarity=0.075  Sum_probs=107.5

Q ss_pred             CCcEEEEEeeccc--cccHHHHHHHHHhCCCceEE-EEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEc
Q 016648          181 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       181 ~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~-i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                      ...++++.|+...  .+.+..++++++. .+++++ ++|.+...+.+..  ...++.+.+++++.   ++|..||++|..
T Consensus       255 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~-~~~~~~~~~g~~~~~~~~~~--~~~~v~~~~~~~~~---~~l~~~d~~v~~  328 (424)
T 2iya_A          255 RPVLLIALGSAFTDHLDFYRTCLSAVDG-LDWHVVLSVGRFVDPADLGE--VPPNVEVHQWVPQL---DILTKASAFITH  328 (424)
T ss_dssp             CCEEEEECCSSSCCCHHHHHHHHHHHTT-CSSEEEEECCTTSCGGGGCS--CCTTEEEESSCCHH---HHHTTCSEEEEC
T ss_pred             CCEEEEEcCCCCcchHHHHHHHHHHHhc-CCcEEEEEECCcCChHHhcc--CCCCeEEecCCCHH---HHHhhCCEEEEC
Confidence            4566778888762  2345556666655 457774 4676554333322  13479999999765   679999998853


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHH
Q 016648          258 SESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAAR  331 (385)
Q Consensus       258 s~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~  331 (385)
                          +..++++||+++|+|+|+.+..+    ..+.+   .+...|..++.+  +.++++++|.++++|++.++++++.++
T Consensus       329 ----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~  401 (424)
T 2iya_A          329 ----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERI---VELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQ  401 (424)
T ss_dssp             ----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ----CchhHHHHHHHcCCCEEEecCccchHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence                34689999999999999987642    23445   445677777654  899999999999999988877777776


Q ss_pred             HHHHhCCHHHHHHHHH
Q 016648          332 QEMEKYDWRAATRTIR  347 (385)
Q Consensus       332 ~~~~~~s~~~~~~~~~  347 (385)
                      +.......+..++.+.
T Consensus       402 ~~~~~~~~~~~~~~i~  417 (424)
T 2iya_A          402 EIREAGGARAAADILE  417 (424)
T ss_dssp             HHHTSCHHHHHHHHHH
T ss_pred             HHHhcCcHHHHHHHHH
Confidence            6555555666665554

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.42  E-value=7.8e-13  Score=105.33  Aligned_cols=132  Identities=14%  Similarity=0.240  Sum_probs=100.0

Q ss_pred             CCCcEEEEEeecc---ccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEE
Q 016648          180 PDKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  256 (385)
Q Consensus       180 ~~~~~i~~~G~~~---~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~  256 (385)
                      +...+++++|+..   ..|.+..++++++..+ .++++++++...+.     ...++++.|+++++++..+ ..||++|.
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~~~~~~-----~~~~v~~~~~~~~~~~l~~-~~ad~~I~   92 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDGNKPDT-----LGLNTRLYKWIPQNDLLGH-PKTRAFIT   92 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCSSCCTT-----CCTTEEEESSCCHHHHHTS-TTEEEEEE
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECCcCccc-----CCCcEEEecCCCHHHHhcC-CCcCEEEE
Confidence            3456788899985   6788899999998774 67777775543221     1348999999987655432 89999996


Q ss_pred             cCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHH
Q 016648          257 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRET  325 (385)
Q Consensus       257 ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~  325 (385)
                      .    +.+++++|||++|+|+|+.+..+    ..+.+   .+...|+.++..  +.++++++|.++++|++.+++
T Consensus        93 ~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~  160 (170)
T 2o6l_A           93 H----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHM---KARGAAVRVDFNTMSSTDLLNALKRVINDPSYKEN  160 (170)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHH
T ss_pred             c----CCccHHHHHHHcCCCEEeccchhhHHHHHHHH---HHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHH
Confidence            4    44799999999999999997642    34456   566788888766  899999999999998864433

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.40  E-value=1.1e-11  Score=115.28  Aligned_cols=271  Identities=13%  Similarity=0.088  Sum_probs=168.6

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.|++.++||++--+.++... ...++...-.|+-++.-++.... .                  +...|.+++-
T Consensus       338 ~~~ia~~Ir~d~IDILVdL~g~t~~~-~i~~aa~RpAPVQvs~lGyp~TT-G------------------l~~iDY~i~D  397 (631)
T 3q3e_A          338 LEFIRSVCESNGAAIFYMPSIGMDMT-TIFASNTRLAPIQAIALGHPATT-H------------------SDFIEYVIVE  397 (631)
T ss_dssp             HHHHHHHHHHHTCSEEEESCCSSSHH-HHHHTTSCCSSEEEEECSSCSCC-C------------------CTTCCEEEEE
T ss_pred             HHHHHHHHHhcCCCEEEECCCCCCch-hHHHHhCCCchheEeccCCCccc-C------------------cccCCEEEeC
Confidence            46888999999999999866544332 22333345678877766643211 1                  2446777764


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCC--CCcEEEEEeeccccccHHHHHHHHH----
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP--DKPLIVHVGRLGVEKSLDFLKRVMD----  205 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~G~~~~~k~~~~l~~a~~----  205 (385)
                      ....-  -...   -.+++..+|+..-.  +.+..... .+..... +.  +.++++.+++.  .|..+.+++++.    
T Consensus       398 ~~~~~--~~~~---ysEklirLP~~~~~--~~p~~~~p-~r~~~~l-p~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~  466 (631)
T 3q3e_A          398 DDYVG--SEEC---FSETLLRLPKDALP--YVPSALAP-EKVDYLL-RENPEVVNIGIASTT--MKLNPYFLEALKAIRD  466 (631)
T ss_dssp             GGGCC--CGGG---CSSEEEEECTTSSC--CCCCTTCC-SSCCCCC-CSCCSEEEEEEEECS--TTCCHHHHHHHHHHHH
T ss_pred             CCCCC--cccC---ceeeEEECCCCccc--cCCcccCC-ccccccC-CcCCCeEEEEECCcc--ccCCHHHHHHHHHHHH
Confidence            42211  0122   24788888864211  11111100 0111111 22  24566666654  566666666554    


Q ss_pred             hCCCceEE--EEeC--CccHHHHHHH---HcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEE
Q 016648          206 RLPEARIA--FIGD--GPYREELEKM---FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  278 (385)
Q Consensus       206 ~~~~~~l~--i~G~--g~~~~~l~~~---~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI  278 (385)
                      +.|+..+.  +.|.  |.....+++.   .-..++.|.|.++.++....|+.+|+++.|+.+.| |++.+|||+||+|||
T Consensus       467 ~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVV  545 (631)
T 3q3e_A          467 RAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGV  545 (631)
T ss_dssp             HCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEE
T ss_pred             hCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEE
Confidence            55776553  3563  2333333222   12247899999999999999999999999987655 999999999999999


Q ss_pred             EecCCCCCcccccC---CCCCeeE-eeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH-H--hCCHHHHHHHHHHHHH
Q 016648          279 GVRAGGIPDIIPED---QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-E--KYDWRAATRTIRNEQY  351 (385)
Q Consensus       279 ~s~~~~~~e~~~~~---~~~~~g~-~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~-~--~~s~~~~~~~~~~~iy  351 (385)
                      +.....+...+...   .-|...+ +..  |.+++++...++.+|++.+++++++.++.. .  -|+  ...+++. +.|
T Consensus       546 Tl~G~~~asRvgaSlL~~~GLpE~LIA~--d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e-~~y  620 (631)
T 3q3e_A          546 CKTGAEVHEHIDEGLFKRLGLPEWLIAN--TVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMG-QVF  620 (631)
T ss_dssp             EECCSSHHHHHHHHHHHHTTCCGGGEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHH-HHH
T ss_pred             eccCCcHHHHhHHHHHHhcCCCcceecC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHH-HHH
Confidence            97665554333000   0233443 433  899999999999999999999999988774 2  255  5567774 688


Q ss_pred             HHHHHHHH
Q 016648          352 NAAIWFWR  359 (385)
Q Consensus       352 ~~~~~~~~  359 (385)
                      +++..+..
T Consensus       621 e~~~~~w~  628 (631)
T 3q3e_A          621 LEKLNAFL  628 (631)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88876544

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.29  E-value=3e-11  Score=114.63  Aligned_cols=286  Identities=12%  Similarity=0.099  Sum_probs=184.5

Q ss_pred             CCCEEEeCCCchhHHHH-HHHH-------------HHhCCCEEEEEecCCCcccccccccccchh---------------
Q 016648           63 KPDIIHASSPGIMVFGA-LIIA-------------KLLCVPIVMSYHTHVPVYIPRYTFSWLVKP---------------  113 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~-~~~~-------------~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~---------------  113 (385)
                      +||+||+|++++..... ++..             ...+..+++|.|+..+.....+....+.+.               
T Consensus       299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f  378 (796)
T 1l5w_A          299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF  378 (796)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence            69999999875544333 2210             115788999999988765432221111000               


Q ss_pred             ------------------------HHHHHHHHHHhCCeEEEcChhHHHHHHHh-----cccCCCcEEEeeCCCCCCCC--
Q 016648          114 ------------------------MWLVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF--  162 (385)
Q Consensus       114 ------------------------~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~vi~~~v~~~~~--  162 (385)
                                              .-.+....+..++.|-++|+...+.++..     ...-+.++.-+-|||+...+  
T Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~  458 (796)
T 1l5w_A          379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIK  458 (796)
T ss_dssp             HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTT
T ss_pred             HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhc
Confidence                                    00134556788999999999999998752     22234689999999987655  


Q ss_pred             --CCC--------------------------CCC----hhh---------------HhhhcC-CCCCCcEEEEEeecccc
Q 016648          163 --HPR--------------------------FRS----SEM---------------RWRLSN-GEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       163 --~~~--------------------------~~~----~~~---------------~~~~~~-~~~~~~~i~~~G~~~~~  194 (385)
                        +|.                          ...    .+.               ..+... ..++.+.++++.|+...
T Consensus       459 ~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eY  538 (796)
T 1l5w_A          459 QCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEY  538 (796)
T ss_dssp             TTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGG
T ss_pred             ccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhh
Confidence              221                          111    000               111121 23467889999999999


Q ss_pred             ccHHH-HHHHHHhC-----------CCceEEEEeCCc--cHHH------HHHHHc------C----CCeEEecccChHHH
Q 016648          195 KSLDF-LKRVMDRL-----------PEARIAFIGDGP--YREE------LEKMFT------G----MPAVFTGMLLGEEL  244 (385)
Q Consensus       195 k~~~~-l~~a~~~~-----------~~~~l~i~G~g~--~~~~------l~~~~~------~----~~i~~~g~~~~~~~  244 (385)
                      |+.++ ++..+.++           .++++++.|.+.  +...      +.....      .    .+|.|+...+-+-.
T Consensus       539 KRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA  618 (796)
T 1l5w_A          539 KRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAA  618 (796)
T ss_dssp             GTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHH
T ss_pred             cccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHH
Confidence            99999 77766544           257888888654  2211      223322      1    14888887777778


Q ss_pred             HHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh-----
Q 016648          245 SQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-----  317 (385)
Q Consensus       245 ~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll-----  317 (385)
                      ..++..||+.+.||+  .|++|++=+-+|..|.+.|++-.|...|+.+. ...+||+++.. +++++.+.-....     
T Consensus       619 ~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~  696 (796)
T 1l5w_A          619 EKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK-VGEENIFIFGH-TVEQVKAILAKGYDPVKW  696 (796)
T ss_dssp             HHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSC-CHHHHHHHHHHCCCHHHH
T ss_pred             HHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhc-cCCCcEEEecC-CHHHHHHHHHcccCHHHH
Confidence            889999999999999  99999999999999999998888888777622 12469999987 8888764333221     


Q ss_pred             --cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          318 --YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       318 --~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                        +++ ..+++..++..  ..|||+.- +.+. .+|++++
T Consensus       697 y~~~~-~~~~vvd~~~~--g~fs~~~~-~~y~-~Ly~~L~  731 (796)
T 1l5w_A          697 RKKDK-VLDAVLKELES--GKYSDGDK-HAFD-QMLHSIG  731 (796)
T ss_dssp             HHHCH-HHHHHHHHHHH--TTTTTTCT-TTTH-HHHHHTS
T ss_pred             hhcCH-HHHHHHHHHHc--CCCCCCcH-HHHH-HHHHHHh
Confidence              233 22222222221  35998774 5564 6887774

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=99.29  E-value=1.3e-11  Score=117.18  Aligned_cols=284  Identities=13%  Similarity=0.090  Sum_probs=184.1

Q ss_pred             CCCEEEeCCCchhHHHH-HHHHH-----------H--hCCCEEEEEecCCCcccccccccccchh---------------
Q 016648           63 KPDIIHASSPGIMVFGA-LIIAK-----------L--LCVPIVMSYHTHVPVYIPRYTFSWLVKP---------------  113 (385)
Q Consensus        63 ~pDiI~~~~~~~~~~~~-~~~~~-----------~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~---------------  113 (385)
                      +||+||+|++++..... ++...           .  .+..+++|.|+..+.....+....+.+.               
T Consensus       289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~  368 (796)
T 2c4m_A          289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF  368 (796)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence            68999999875544333 22100           1  4567899999988765432221111000               


Q ss_pred             -----------------------HHHHHHHHHHhCCeEEEcChhHHHHHHHh-----cccCCCcEEEeeCCCCCCCC---
Q 016648          114 -----------------------MWLVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF---  162 (385)
Q Consensus       114 -----------------------~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~vi~~~v~~~~~---  162 (385)
                                             .-.+....+..++.|-++|+...+.++..     ...-+.++.-+-|||+...+   
T Consensus       369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~  448 (796)
T 2c4m_A          369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRM  448 (796)
T ss_dssp             HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCT
T ss_pred             HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcc
Confidence                                   00134556788999999999999998842     22235689999999999888   


Q ss_pred             -CCC---------------------------CCCh-------hh------------Hhhhc-CCCCCCcEEEEEeecccc
Q 016648          163 -HPR---------------------------FRSS-------EM------------RWRLS-NGEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       163 -~~~---------------------------~~~~-------~~------------~~~~~-~~~~~~~~i~~~G~~~~~  194 (385)
                       +|.                           ....       +.            ..+.. ...++.+.++++.|+...
T Consensus       449 ~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheY  528 (796)
T 2c4m_A          449 INPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEY  528 (796)
T ss_dssp             TCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGG
T ss_pred             cCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhh
Confidence             222                           1110       00            01111 123467899999999999


Q ss_pred             ccHHH-HHHHHHhC-----------CCceEEEEeCCc--cHHH------HHHHHc--------CC--CeEEecccChHHH
Q 016648          195 KSLDF-LKRVMDRL-----------PEARIAFIGDGP--YREE------LEKMFT--------GM--PAVFTGMLLGEEL  244 (385)
Q Consensus       195 k~~~~-l~~a~~~~-----------~~~~l~i~G~g~--~~~~------l~~~~~--------~~--~i~~~g~~~~~~~  244 (385)
                      |+.++ ++..+.++           .++++++.|.+.  +...      +.....        ..  +|.|+...+-+-.
T Consensus       529 KRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA  608 (796)
T 2c4m_A          529 KRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPA  608 (796)
T ss_dssp             GTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHH
T ss_pred             cccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHH
Confidence            99999 77765544           257888888654  2221      333322        11  4888887777778


Q ss_pred             HHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCC--CCHHHHHHHHhHhh---
Q 016648          245 SQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLL---  317 (385)
Q Consensus       245 ~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~--~~~~~l~~~i~~ll---  317 (385)
                      ..++..||+.+.||+  .|++|++=+-+|..|.+.|++-.|...|+.+. ...+||+++..  .+++++... ....   
T Consensus       609 ~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~~~~ev~~l~~~-y~a~~~y  686 (796)
T 2c4m_A          609 EHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDS-VGEENAYIFGARVEELPALRES-YKPYELY  686 (796)
T ss_dssp             HHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHH-HCGGGSEEESCCTTTHHHHHHT-CCHHHHH
T ss_pred             HHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhh-cCCCcEEEecCchhhHHHHHHh-hChHHHh
Confidence            899999999999999  99999999999999999998888877777621 12469999986  666666554 2211   


Q ss_pred             -cCHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHH
Q 016648          318 -YNQELRETMGQAARQEM--EKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       318 -~~~~~~~~~~~~a~~~~--~~~s~~~~~~~~~~~iy~~~~  355 (385)
                       ++++ .+    +..+.+  ..|||+.- +.+. .+|++++
T Consensus       687 ~~~~~-~~----~vvd~~~~g~fs~~~~-~~y~-~Ly~~L~  720 (796)
T 2c4m_A          687 ETVPG-LK----RALDALDNGTLNDNNS-GLFY-DLKHSLI  720 (796)
T ss_dssp             HHSTT-HH----HHHHTTTSSSSCCTTC-CHHH-HHHHHHH
T ss_pred             hcCHH-HH----HHHHHHHcCCCCCCCH-HHHH-HHHHHHH
Confidence             1221 12    222222  34888776 5674 6888876

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=99.23  E-value=2.7e-10  Score=108.58  Aligned_cols=193  Identities=14%  Similarity=0.160  Sum_probs=135.1

Q ss_pred             HHHHHHhCCeEEEcChhHHHHHHHh-----cccCCCcEEEeeCCCCCCCC----CCCC----------------------
Q 016648          118 IKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF----HPRF----------------------  166 (385)
Q Consensus       118 ~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~vi~~~v~~~~~----~~~~----------------------  166 (385)
                      ....+..++.|-++|+...+.++..     +...+.++.-+-|||+...+    +|..                      
T Consensus       431 a~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L  510 (824)
T 2gj4_A          431 AHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKL  510 (824)
T ss_dssp             HHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGG
T ss_pred             HHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHH
Confidence            3456788999999999999888642     11235689999999998887    3311                      


Q ss_pred             ---CC-hhh-------------------Hhhhc-CCCCCCcEEEEEeeccccccHHHH-HHHHHhC------C-----Cc
Q 016648          167 ---RS-SEM-------------------RWRLS-NGEPDKPLIVHVGRLGVEKSLDFL-KRVMDRL------P-----EA  210 (385)
Q Consensus       167 ---~~-~~~-------------------~~~~~-~~~~~~~~i~~~G~~~~~k~~~~l-~~a~~~~------~-----~~  210 (385)
                         .. ...                   ..+.. ...++.+.++++.|+...|+.+++ +..+.++      |     +.
T Consensus       511 ~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~  590 (824)
T 2gj4_A          511 LSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPR  590 (824)
T ss_dssp             GGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCE
T ss_pred             HhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCE
Confidence               00 111                   00011 123467899999999999999887 6655444      2     46


Q ss_pred             eEEEEeCCc--cHHH------HHHHHc--------CC--CeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHH
Q 016648          211 RIAFIGDGP--YREE------LEKMFT--------GM--PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEA  270 (385)
Q Consensus       211 ~l~i~G~g~--~~~~------l~~~~~--------~~--~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea  270 (385)
                      ++++.|.+.  +...      +.....        ..  +|.|+...+-+-...++..||+.+.||+  .|++|++=+=+
T Consensus       591 q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKa  670 (824)
T 2gj4_A          591 TVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKF  670 (824)
T ss_dssp             EEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHH
T ss_pred             EEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHH
Confidence            888888654  2111      222222        11  5888887777778889999999999999  99999999999


Q ss_pred             HhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHH
Q 016648          271 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  313 (385)
Q Consensus       271 ~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i  313 (385)
                      |..|.+.|++-.|...|+.+. ....||+++... ++++ .++
T Consensus       671 mlNGaLtigtlDGanvEi~e~-vG~~Ngf~FG~~-~~ev-~~l  710 (824)
T 2gj4_A          671 MLNGALTIGTMDGANVEMAEE-AGEENFFIFGMR-VEDV-DRL  710 (824)
T ss_dssp             HHTTCEEEECSCTTHHHHHHH-HCGGGSEECSCC-HHHH-HHH
T ss_pred             HHcCceEEEEecCccchhhhc-cCCCCEEEeCCc-HHHH-HHH
Confidence            999999999877776666511 145689998864 6666 444

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.22  E-value=9.3e-10  Score=100.64  Aligned_cols=136  Identities=12%  Similarity=0.093  Sum_probs=96.4

Q ss_pred             CCcEEEEEeec-cccccHHHHHHHHHhCCCceEEEE-eCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcC
Q 016648          181 DKPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       181 ~~~~i~~~G~~-~~~k~~~~l~~a~~~~~~~~l~i~-G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      ...++++.|+. ...+..+.++++++.++ .+++++ |.+...  ..  ....++.+.+++++.+   +|..||++|.. 
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~--~~--~~~~~v~~~~~~~~~~---~l~~~d~~v~~-  308 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-RRVILSRGWADLV--LP--DDGADCFAIGEVNHQV---LFGRVAAVIHH-  308 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHTT-CCEEECTTCTTCC--CS--SCGGGEEECSSCCHHH---HGGGSSEEEEC-
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-CeEEEEeCCCccc--cc--CCCCCEEEeCcCChHH---HHhhCCEEEeC-
Confidence            35678889998 47888899999998875 566554 654321  11  1123799999998755   47999999964 


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHH
Q 016648          259 ESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQ  332 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~  332 (385)
                         +..++++||+++|+|+|+.+..+    ..+.+   .+...|..++..  +.++++++|.++ +|++.++++++.+++
T Consensus       309 ---~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~  381 (415)
T 1iir_A          309 ---GGAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT  381 (415)
T ss_dssp             ---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH
T ss_pred             ---CChhHHHHHHHcCCCEEECCCCCccHHHHHHH---HHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence               34579999999999999987643    33445   445677777643  899999999999 887766655554443

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.22  E-value=7.8e-10  Score=100.73  Aligned_cols=151  Identities=12%  Similarity=0.063  Sum_probs=101.1

Q ss_pred             CCCcEEEEEeecc-ccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcC
Q 016648          180 PDKPLIVHVGRLG-VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       180 ~~~~~i~~~G~~~-~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      ..+.++++.|+.. ..+.+..++++++.. +.++++.+++...+.   .....++.+.++++.+   ++|..||++|...
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-~~~vv~~~g~~~~~~---~~~~~~v~~~~~~~~~---~ll~~~d~~v~~g  292 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-GRRVVLSSGWAGLGR---IDEGDDCLVVGEVNHQ---VLFGRVAAVVHHG  292 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHHT-TCCEEEECTTTTCCC---SSCCTTEEEESSCCHH---HHGGGSSEEEECC
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCccccc---ccCCCCEEEecCCCHH---HHHhhCcEEEECC
Confidence            3466788889887 667788899999886 567777654322111   1124589999999754   4678999999443


Q ss_pred             CCCCCcHHHHHHHhcCCcEEEecCCCC----CcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHH
Q 016648          259 ESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQ  332 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~PvI~s~~~~~----~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~  332 (385)
                          ..+++.||+++|+|+|+....+-    .+.+   .....|..++..  +.+++.+++.++++ ++.++++.+.+..
T Consensus       293 ----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~  364 (404)
T 3h4t_A          293 ----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRV---ADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGT  364 (404)
T ss_dssp             ----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTT
T ss_pred             ----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHH---HHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence                45789999999999999765432    2234   344566666533  79999999999998 7666555544443


Q ss_pred             HHHhCCHHHHHHHH
Q 016648          333 EMEKYDWRAATRTI  346 (385)
Q Consensus       333 ~~~~~s~~~~~~~~  346 (385)
                      ... -..+.+++.+
T Consensus       365 ~~~-~~~~~~~~~i  377 (404)
T 3h4t_A          365 IRT-DGTTVAAKLL  377 (404)
T ss_dssp             CCC-CHHHHHHHHH
T ss_pred             Hhh-hHHHHHHHHH
Confidence            323 3444444444

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.17  E-value=1.6e-10  Score=105.12  Aligned_cols=153  Identities=14%  Similarity=0.100  Sum_probs=97.0

Q ss_pred             CCCcEEEEEeecccccc----HHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEE
Q 016648          180 PDKPLIVHVGRLGVEKS----LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       180 ~~~~~i~~~G~~~~~k~----~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      +...+++..|++...++    +..+++++... +..+++.+.+...+....  ...++.+.+++|+.+   +|..+|++|
T Consensus       236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~--~~~~v~~~~~~p~~~---lL~~~~~~v  309 (400)
T 4amg_A          236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADV-DAEFVLTLGGGDLALLGE--LPANVRVVEWIPLGA---LLETCDAII  309 (400)
T ss_dssp             TCCEEEECCCSCC--CCSSSTTHHHHHHGGGS-SSEEEEECCTTCCCCCCC--CCTTEEEECCCCHHH---HHTTCSEEE
T ss_pred             CCcEEEEeCCcccccCccHHHHHHHHHHhhcc-CceEEEEecCcccccccc--CCCCEEEEeecCHHH---Hhhhhhhee
Confidence            34556777787754432    44455555554 456666554332221111  124799999997654   588999988


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR  331 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~  331 (385)
                      .    .+..+++.||+++|+|+|+....+    +.+.+   .+...|..++.  .+..+++|.++++|++.+++.++.++
T Consensus       310 ~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v---~~~G~g~~l~~--~~~~~~al~~lL~d~~~r~~a~~l~~  380 (400)
T 4amg_A          310 H----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL---TGLGIGFDAEA--GSLGAEQCRRLLDDAGLREAALRVRQ  380 (400)
T ss_dssp             E----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHH---HHHTSEEECCT--TTCSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             c----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHH---HHCCCEEEcCC--CCchHHHHHHHHcCHHHHHHHHHHHH
Confidence            4    455789999999999999865543    33444   34456776663  44567899999999987776666655


Q ss_pred             HHHHhCCHHHHHHHHH
Q 016648          332 QEMEKYDWRAATRTIR  347 (385)
Q Consensus       332 ~~~~~~s~~~~~~~~~  347 (385)
                      +....-+....++.+.
T Consensus       381 ~~~~~~~~~~~a~~le  396 (400)
T 4amg_A          381 EMSEMPPPAETAAXLV  396 (400)
T ss_dssp             HHHTSCCHHHHHHHHH
T ss_pred             HHHcCCCHHHHHHHHH
Confidence            5555567777666653

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.07  E-value=4.2e-09  Score=96.34  Aligned_cols=135  Identities=10%  Similarity=0.073  Sum_probs=95.3

Q ss_pred             CCcEEEEEeecc---ccccHHHHHHHHHhCCCceEEEE-eCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEE
Q 016648          181 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  256 (385)
Q Consensus       181 ~~~~i~~~G~~~---~~k~~~~l~~a~~~~~~~~l~i~-G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~  256 (385)
                      ...++++.|+..   ..+.++.++++++.. +.+++++ |.+...  ..  ....++.+.++++..   ++|..||++|.
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-~~~~v~~~g~~~~~--~~--~~~~~v~~~~~~~~~---~ll~~~d~~v~  308 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-GRRVILSRGWTELV--LP--DDRDDCFAIDEVNFQ---ALFRRVAAVIH  308 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-TCCEEEECTTTTCC--CS--CCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHHC-CCeEEEEeCCcccc--cc--CCCCCEEEeccCChH---HHhccCCEEEe
Confidence            356778888874   467788888998887 4666664 654321  11  113479999999754   46899999996


Q ss_pred             cCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCC--CCHHHHHHHHhHhhcCHHHHHHHHHHH
Q 016648          257 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAA  330 (385)
Q Consensus       257 ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~--~~~~~l~~~i~~ll~~~~~~~~~~~~a  330 (385)
                          .+..+++.||+++|+|+|+.+..+    ..+.+   .+...|..++.  .+.++++++|.++ +|++.++++++.+
T Consensus       309 ----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~  380 (416)
T 1rrv_A          309 ----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVA  380 (416)
T ss_dssp             ----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHT
T ss_pred             ----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHH---HHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHH
Confidence                344679999999999999976532    23344   44556776653  4889999999999 9887666655544


Q ss_pred             H
Q 016648          331 R  331 (385)
Q Consensus       331 ~  331 (385)
                      +
T Consensus       381 ~  381 (416)
T 1rrv_A          381 G  381 (416)
T ss_dssp             T
T ss_pred             H
Confidence            3

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.68  E-value=2.3e-07  Score=79.12  Aligned_cols=191  Identities=10%  Similarity=0.018  Sum_probs=110.5

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.+++.+||++++.++....-....++...+.++++ +-|.. .    .                 ..||.++-.
T Consensus        58 ~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~-iDD~~-~----~-----------------~~~Dllin~  114 (282)
T 3hbm_A           58 IYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILS-FDDEI-K----P-----------------HHCDILLNV  114 (282)
T ss_dssp             HHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEE-ECSSC-C----C-----------------CCCSEEEEC
T ss_pred             HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEE-EecCC-C----c-----------------ccCCEEEeC
Confidence            45678888889999999987744332222222324666654 34421 0    0                 238999887


Q ss_pred             ChhHHHHHHHhc-ccCCCcEEEeeCCCCCCCCCCCCCChhhHh-hhcCCCCCCcEEEEEeeccccccHHHHHHHHHhCCC
Q 016648          132 SVAIGKDLEAAR-VTAANKIRIWKKGVDSESFHPRFRSSEMRW-RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE  209 (385)
Q Consensus       132 s~~~~~~~~~~~-~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~~~  209 (385)
                      +......  .+- ..|.......  |.+..   +..  ++... +.....+.+.+++++|..+...-...+++++.....
T Consensus       115 ~~~~~~~--~Y~~~~p~~~~~l~--G~~Y~---~lR--~eF~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~~~~  185 (282)
T 3hbm_A          115 NAYAKAS--DYEGLVPFKCEVRC--GFSYA---LIR--EEFYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPKTKI  185 (282)
T ss_dssp             STTCCGG--GGTTTCC-CCEEEE--SGGGC---CCC--HHHHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCTTSC
T ss_pred             Ccccchh--hccccCCCCCeEee--CCccc---ccC--HHHHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhcCCC
Confidence            6543211  111 1122222222  32211   111  11110 001112233456788877665555666777655433


Q ss_pred             ceEEEEeCCc-cHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecC
Q 016648          210 ARIAFIGDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  282 (385)
Q Consensus       210 ~~l~i~G~g~-~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~  282 (385)
                       -.++.|.+. ..+.+++.... .++.+.+++  +++.++|+.||++|.+.     |.++.|++++|+|.|.-..
T Consensus       186 -i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI~~g-----G~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          186 -ISIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLIISA-----SSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             -EEEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEEEES-----SHHHHHHHHTTCCEEEECC
T ss_pred             -EEEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEEECC-----cHHHHHHHHcCCCEEEEeC
Confidence             334566553 45666665543 479999999  89999999999999742     5899999999999997653

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=98.67  E-value=1e-06  Score=85.68  Aligned_cols=177  Identities=10%  Similarity=0.098  Sum_probs=127.1

Q ss_pred             CCCCcEEEEEeecccc--ccHHHHHHHHHhCCCceEEEEeCCcc-HHHHHHHHcC-----CCeEEecccChHHHHHHHHh
Q 016648          179 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGPY-REELEKMFTG-----MPAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l~i~G~g~~-~~~l~~~~~~-----~~i~~~g~~~~~~~~~~~~~  250 (385)
                      +++.++++.+.++.+-  .-++...+++++.|+.+|++...+.. .+.+.+.+..     .+++|.+..+.++....++.
T Consensus       520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~  599 (723)
T 4gyw_A          520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL  599 (723)
T ss_dssp             CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred             CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence            4566777777766543  33566778888889999998875443 3344444432     25999999999999999999


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccC---CCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHH
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~---~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      +|+++-|.-+ +.+++.+||+.+|+|||+-....+..-+...   .-|-.-++.  .|.++..+...++.+|++.+.+++
T Consensus       600 ~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~~~l~~lr  676 (723)
T 4gyw_A          600 ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA--KNRQEYEDIAVKLGTDLEYLKKVR  676 (723)
T ss_dssp             CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--SSHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc--CCHHHHHHHHHHHhcCHHHHHHHH
Confidence            9999976544 4488999999999999976533322211000   001122333  489999999999999999999999


Q ss_pred             HHHHHHHH---hCCHHHHHHHHHHHHHHHHHHHHH
Q 016648          328 QAARQEME---KYDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       328 ~~a~~~~~---~~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      ++-++...   -|+.+..++.+. ..|+++-.++.
T Consensus       677 ~~l~~~~~~s~l~d~~~~~~~le-~a~~~~w~r~~  710 (723)
T 4gyw_A          677 GKVWKQRISSPLFNTKQYTMELE-RLYLQMWEHYA  710 (723)
T ss_dssp             HHHHHHHHHSSTTCHHHHHHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHhCcCcCHHHHHHHHH-HHHHHHHHHHH
Confidence            88887753   299999999995 79998865443

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.50  E-value=7.9e-06  Score=75.23  Aligned_cols=144  Identities=13%  Similarity=0.159  Sum_probs=90.9

Q ss_pred             CCCCcEEEEEeecccc--ccHHHHHHHHHhCCCceEEE-EeCCcc---HHHHHHHHcCCCeEEecccChHHHHHHHH--h
Q 016648          179 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAF-IGDGPY---REELEKMFTGMPAVFTGMLLGEELSQAYA--S  250 (385)
Q Consensus       179 ~~~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l~i-~G~g~~---~~~l~~~~~~~~i~~~g~~~~~~~~~~~~--~  250 (385)
                      ++...+++..|+....  +-+..++++++.. +.++++ +|....   .+.+.+.. ..++.+.+++|+.   ++|.  .
T Consensus       269 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~---~vL~h~~  343 (456)
T 2c1x_A          269 KPTSVVYISFGTVTTPPPAEVVALSEALEAS-RVPFIWSLRDKARVHLPEGFLEKT-RGYGMVVPWAPQA---EVLAHEA  343 (456)
T ss_dssp             CTTCEEEEECCSSCCCCHHHHHHHHHHHHHH-TCCEEEECCGGGGGGSCTTHHHHH-TTTEEEESCCCHH---HHHTSTT
T ss_pred             CCcceEEEecCccccCCHHHHHHHHHHHHhc-CCeEEEEECCcchhhCCHHHHhhc-CCceEEecCCCHH---HHhcCCc
Confidence            3455667778877543  2244555666553 455554 443221   11122211 3478889999764   4588  6


Q ss_pred             CcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCC-CeeEeeCC--CCHHHHHHHHhHhhcCHHHH
Q 016648          251 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLFNP--GDLDDCLSKLEPLLYNQELR  323 (385)
Q Consensus       251 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~-~~g~~~~~--~~~~~l~~~i~~ll~~~~~~  323 (385)
                      +|++|    ..+..++++||+++|+|+|+-+..+    ....+   .+. +.|..++.  -+.+++.++|.++++|++ .
T Consensus       344 ~~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l---~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~-~  415 (456)
T 2c1x_A          344 VGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMV---EDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK-G  415 (456)
T ss_dssp             EEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH-H
T ss_pred             CCEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHH---HHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc-H
Confidence            67887    4456789999999999999876532    12233   333 56666542  378999999999999875 5


Q ss_pred             HHHHHHHHHHHH
Q 016648          324 ETMGQAARQEME  335 (385)
Q Consensus       324 ~~~~~~a~~~~~  335 (385)
                      +++++++++..+
T Consensus       416 ~~~r~~a~~l~~  427 (456)
T 2c1x_A          416 KKLRENLRALRE  427 (456)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            566666666543

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.41  E-value=0.0001  Score=68.01  Aligned_cols=130  Identities=14%  Similarity=0.109  Sum_probs=82.5

Q ss_pred             CCCCcEEEEEeecc-cc--ccHHHHHHHHHhCCCceEEEE-eCC--ccHHHHHHHHc-CCCeEEecccChHHHHHHHH--
Q 016648          179 EPDKPLIVHVGRLG-VE--KSLDFLKRVMDRLPEARIAFI-GDG--PYREELEKMFT-GMPAVFTGMLLGEELSQAYA--  249 (385)
Q Consensus       179 ~~~~~~i~~~G~~~-~~--k~~~~l~~a~~~~~~~~l~i~-G~g--~~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~--  249 (385)
                      ++...+++..|+.. ..  .-+..++++++.. +.+++++ |.+  ...+.+.+... ..++.+.+++|+.+   +|.  
T Consensus       274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~---vL~h~  349 (463)
T 2acv_A          274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHS-GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVE---VLAHK  349 (463)
T ss_dssp             CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHH---HHHST
T ss_pred             CCCceEEEEeccccccCCHHHHHHHHHHHHhC-CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHHH---HhCCC
Confidence            34456677788876 22  2255666666654 4666654 433  12122322220 24788889997654   576  


Q ss_pred             hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC----Ccc-cccCCCCCeeEee-C-------CCCHHHHHHHHhHh
Q 016648          250 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDI-IPEDQDGKIGYLF-N-------PGDLDDCLSKLEPL  316 (385)
Q Consensus       250 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~----~e~-~~~~~~~~~g~~~-~-------~~~~~~l~~~i~~l  316 (385)
                      .+|++|    ..+..++++||+++|+|+|+-...+-    ... +   +..+.|..+ .       .-+.+++.++|.++
T Consensus       350 ~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv---~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~l  422 (463)
T 2acv_A          350 AIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV---KEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDL  422 (463)
T ss_dssp             TEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH---HTSCCEEESCSSCCTTCCCCCHHHHHHHHHHH
T ss_pred             ccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH---HHcCeEEEEecccCCCCccccHHHHHHHHHHH
Confidence            577787    44567899999999999999765321    222 3   345677766 2       23789999999999


Q ss_pred             hcC
Q 016648          317 LYN  319 (385)
Q Consensus       317 l~~  319 (385)
                      +++
T Consensus       423 l~~  425 (463)
T 2acv_A          423 MDK  425 (463)
T ss_dssp             TCT
T ss_pred             Hhc
Confidence            973

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.19  E-value=0.0014  Score=60.59  Aligned_cols=144  Identities=13%  Similarity=0.024  Sum_probs=85.8

Q ss_pred             CCCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEE-eCCc--------------c-----HHHHHHHHcCCCeEEec
Q 016648          180 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP--------------Y-----REELEKMFTGMPAVFTG  237 (385)
Q Consensus       180 ~~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~-G~g~--------------~-----~~~l~~~~~~~~i~~~g  237 (385)
                      +...+++..|+...  ..-+..++++++.. +.+++++ |.+.              .     .+.+.+..++.++.+.+
T Consensus       267 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~  345 (480)
T 2vch_A          267 LGSVLYVSFGSGGTLTCEQLNELALGLADS-EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPF  345 (480)
T ss_dssp             TTCEEEEECTTTCCCCHHHHHHHHHHHHHT-TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEES
T ss_pred             CCceEEEecccccCCCHHHHHHHHHHHHhc-CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeC
Confidence            35567777888743  23355666666665 4566554 4321              0     01122222233356667


Q ss_pred             ccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcc-cccCCCCCeeEeeCC-----CCHH
Q 016648          238 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDI-IPEDQDGKIGYLFNP-----GDLD  307 (385)
Q Consensus       238 ~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~-~~~~~~~~~g~~~~~-----~~~~  307 (385)
                      ++|+.   .+|+.+++.++-+  .|.-++++||+++|+|+|+-...+    .... +   +.-+.|..++.     -+.+
T Consensus       346 w~Pq~---~vL~h~~v~~fvt--HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~---~~~G~g~~l~~~~~~~~~~~  417 (480)
T 2vch_A          346 WAPQA---QVLAHPSTGGFLT--HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS---EDIRAALRPRAGDDGLVRRE  417 (480)
T ss_dssp             CCCHH---HHHHSTTEEEEEE--CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH---HTTCCEECCCCCTTSCCCHH
T ss_pred             ccCHH---HHhCCCCcCeEEe--cccchhHHHHHHcCCCEEeccccccchHHHHHHH---HHhCeEEEeecccCCccCHH
Confidence            99765   5699999643333  355778999999999999976542    1122 2   24456665543     3789


Q ss_pred             HHHHHHhHhhcCHHHHHHHHHHHHHH
Q 016648          308 DCLSKLEPLLYNQELRETMGQAARQE  333 (385)
Q Consensus       308 ~l~~~i~~ll~~~~~~~~~~~~a~~~  333 (385)
                      ++.++|.++++++ .-.++++++++.
T Consensus       418 ~l~~av~~vl~~~-~~~~~r~~a~~l  442 (480)
T 2vch_A          418 EVARVVKGLMEGE-EGKGVRNKMKEL  442 (480)
T ss_dssp             HHHHHHHHHHTST-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCc-chHHHHHHHHHH
Confidence            9999999999843 223444444444

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.18  E-value=4.3e-05  Score=69.85  Aligned_cols=199  Identities=13%  Similarity=0.003  Sum_probs=110.3

Q ss_pred             HHHhCCeEEEcChhHHHH-----HHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeecccc-
Q 016648          121 LHRAADLTLVPSVAIGKD-----LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE-  194 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~-  194 (385)
                      ....++.+++.|-...+.     ++...    .++..|..-.....-.......+...-+...+++..+++..|+.... 
T Consensus       212 ~~~~~~~vl~ns~~eLE~~~~~~~~~~~----~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~  287 (454)
T 3hbf_A          212 ELPRANAVAINSFATIHPLIENELNSKF----KLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPP  287 (454)
T ss_dssp             HGGGSSCEEESSCGGGCHHHHHHHHTTS----SCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCC
T ss_pred             hhccCCEEEECChhHhCHHHHHHHHhcC----CCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCC
Confidence            456799999988665443     22221    24444432111000000111111222222223455667778877542 


Q ss_pred             -ccHHHHHHHHHhCCCceEEEEeCCccHH----HHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHH
Q 016648          195 -KSLDFLKRVMDRLPEARIAFIGDGPYRE----ELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE  269 (385)
Q Consensus       195 -k~~~~l~~a~~~~~~~~l~i~G~g~~~~----~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~E  269 (385)
                       .-+..++++++.. +.+++++-.+...+    .+.+.. ..++.+.+++|+.   .++..+++.++-+  .+.-++++|
T Consensus       288 ~~~~~el~~~l~~~-~~~flw~~~~~~~~~lp~~~~~~~-~~~~~vv~w~Pq~---~vL~h~~v~~fvt--H~G~~S~~E  360 (454)
T 3hbf_A          288 PHELTALAESLEEC-GFPFIWSFRGDPKEKLPKGFLERT-KTKGKIVAWAPQV---EILKHSSVGVFLT--HSGWNSVLE  360 (454)
T ss_dssp             HHHHHHHHHHHHHH-CCCEEEECCSCHHHHSCTTHHHHT-TTTEEEESSCCHH---HHHHSTTEEEEEE--CCCHHHHHH
T ss_pred             HHHHHHHHHHHHhC-CCeEEEEeCCcchhcCCHhHHhhc-CCceEEEeeCCHH---HHHhhcCcCeEEe--cCCcchHHH
Confidence             2355566666654 45665543322211    121111 2478888999864   5688999544433  345678999


Q ss_pred             HHhcCCcEEEecCCC----CCcccccCCCC-CeeEeeCC--CCHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          270 AMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       270 a~a~G~PvI~s~~~~----~~e~~~~~~~~-~~g~~~~~--~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                      ++++|+|+|+-...+    ....+   .+. +.|..++.  -+.+++.+++.++++++ ..+++++++++..
T Consensus       361 al~~GvP~i~~P~~~DQ~~Na~~v---~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l~  428 (454)
T 3hbf_A          361 CIVGGVPMISRPFFGDQGLNTILT---ESVLEIGVGVDNGVLTKESIKKALELTMSSE-KGGIMRQKIVKLK  428 (454)
T ss_dssp             HHHHTCCEEECCCSTTHHHHHHHH---HTTSCSEEECGGGSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHHH
T ss_pred             HHHcCCCEecCcccccHHHHHHHH---HHhhCeeEEecCCCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHHH
Confidence            999999999976532    12233   332 56666653  47899999999999885 2345666665553

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.07  E-value=7.7e-05  Score=69.25  Aligned_cols=144  Identities=12%  Similarity=0.123  Sum_probs=92.1

Q ss_pred             CCcEEEEEeeccc--cccHHHHHHHHHhCCCceEEEE-eCCc-------cHHHHHHHHcCCCeEEecccChHHHHHHHHh
Q 016648          181 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP-------YREELEKMFTGMPAVFTGMLLGEELSQAYAS  250 (385)
Q Consensus       181 ~~~~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~-G~g~-------~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~  250 (385)
                      ...+++..|+...  ...+..++++++.. +.+++++ |...       ..+.+.+.. ..++.+.+++|+.+   +|+.
T Consensus       295 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~~~pq~~---~L~h  369 (482)
T 2pq6_A          295 GSVVYVNFGSTTVMTPEQLLEFAWGLANC-KKSFLWIIRPDLVIGGSVIFSSEFTNEI-ADRGLIASWCPQDK---VLNH  369 (482)
T ss_dssp             TCEEEEECCSSSCCCHHHHHHHHHHHHHT-TCEEEEECCGGGSTTTGGGSCHHHHHHH-TTTEEEESCCCHHH---HHTS
T ss_pred             CceEEEecCCcccCCHHHHHHHHHHHHhc-CCcEEEEEcCCccccccccCcHhHHHhc-CCCEEEEeecCHHH---HhcC
Confidence            4556777787643  12255666777664 4666654 4221       122333322 34889999998754   6877


Q ss_pred             CcE--EEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC----CcccccCCCCCeeEeeC-CCCHHHHHHHHhHhhcCHHHH
Q 016648          251 GDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELR  323 (385)
Q Consensus       251 adi--~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~----~e~~~~~~~~~~g~~~~-~~~~~~l~~~i~~ll~~~~~~  323 (385)
                      +++  +|    ..+..++++||+++|+|+|+-...+-    ...+.  +..+.|..++ .-+.+++.++|.++++|++ .
T Consensus       370 ~~~~~~v----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~--~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~-~  442 (482)
T 2pq6_A          370 PSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDK-G  442 (482)
T ss_dssp             TTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHH-H
T ss_pred             CCCCEEE----ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCEEEEECCCCCHHHHHHHHHHHHcCCc-H
Confidence            666  55    34567899999999999999876431    12220  1345666664 2389999999999999886 4


Q ss_pred             HHHHHHHHHHHHh
Q 016648          324 ETMGQAARQEMEK  336 (385)
Q Consensus       324 ~~~~~~a~~~~~~  336 (385)
                      +++++++++..+.
T Consensus       443 ~~~r~~a~~l~~~  455 (482)
T 2pq6_A          443 KKMKQKAMELKKK  455 (482)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            6677777766543

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=97.99  E-value=9.7e-05  Score=72.31  Aligned_cols=217  Identities=13%  Similarity=0.014  Sum_probs=118.7

Q ss_pred             HHHhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCC---ChhhHhhhcCCCCCCcEEEEEeecccc---
Q 016648          121 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR---SSEMRWRLSNGEPDKPLIVHVGRLGVE---  194 (385)
Q Consensus       121 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~G~~~~~---  194 (385)
                      .....|.+++.|+...+.+.+.++.+..++.....+-....+.....   ....+.++. .++++.+|+|.-++...   
T Consensus       475 ~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~-~~~~kk~ILyaPT~r~~~~~  553 (729)
T 3l7i_A          475 ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLN-LPSDKKVIMYAPTWRDDEFV  553 (729)
T ss_dssp             HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTT-CCSSCEEEEECCCCCGGGCC
T ss_pred             hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhC-CCCCCeEEEEeeeeeCCccc
Confidence            45668999999999999998888765555554443221111111111   112222332 35678999999877543   


Q ss_pred             ----------ccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCC
Q 016648          195 ----------KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSES  260 (385)
Q Consensus       195 ----------k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~  260 (385)
                                .+++.+.+.+.  ++..+++-.. +.   +.....    ...+....  +..++.++|..||++|.-   
T Consensus       554 ~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~H-p~---~~~~~~~~~~~~~~~~~~--~~~di~~ll~~aD~lITD---  622 (729)
T 3l7i_A          554 SKGKYLFELKIDLDNLYKELG--DDYVILLRMH-YL---ISNALDLSGYENFAIDVS--NYNDVSELFLISDCLITD---  622 (729)
T ss_dssp             GGGSSCCCCTTCHHHHHHHHT--TTEEEEECCC-HH---HHTTCCCTTCTTTEEECT--TCSCHHHHHHTCSEEEES---
T ss_pred             cccccccchhhHHHHHHHHcC--CCeEEEEecC-cc---hhccccccccCCcEEeCC--CCcCHHHHHHHhCEEEee---
Confidence                      23444444443  3555555432 11   111111    11232222  236889999999999954   


Q ss_pred             CCCcHHHHHHHhcCCcEEEecCCCCCcccc-------cCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHH
Q 016648          261 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIP-------EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE  333 (385)
Q Consensus       261 e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~-------~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~  333 (385)
                        ++..++|++.+++|||..... ..++..       +..+...|-++.  |.++|.++|.....+++...+..++-++.
T Consensus       623 --ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~  697 (729)
T 3l7i_A          623 --YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT--EPYGLAKELKNLDKVQQQYQEKIDAFYDR  697 (729)
T ss_dssp             --SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHH
T ss_pred             --chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC--CHHHHHHHHhhhhccchhHHHHHHHHHHH
Confidence              477899999999999976221 112210       001223344444  89999999998765443333322222222


Q ss_pred             HHhCCHHHHHHHHHHHHHHHH
Q 016648          334 MEKYDWRAATRTIRNEQYNAA  354 (385)
Q Consensus       334 ~~~~s~~~~~~~~~~~iy~~~  354 (385)
                      .-.|.-...++++.+.+++..
T Consensus       698 ~~~~~dg~as~ri~~~i~~~~  718 (729)
T 3l7i_A          698 FCSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             HSTTCCSCHHHHHHHHHHHHH
T ss_pred             hCCccCChHHHHHHHHHHhcC
Confidence            222333456666665555544

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=97.52  E-value=0.0018  Score=57.19  Aligned_cols=96  Identities=15%  Similarity=0.176  Sum_probs=66.4

Q ss_pred             CCcEEEEEee-ccccccH--HHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCC------C-eEEecccChHHHHHHH
Q 016648          181 DKPLIVHVGR-LGVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQAY  248 (385)
Q Consensus       181 ~~~~i~~~G~-~~~~k~~--~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~------~-i~~~g~~~~~~~~~~~  248 (385)
                      ++.+++..|. ..+.|.+  +.+.++++.+  .+++++++|...+.+..++.....      + +.+.|..+-.++..++
T Consensus       180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali  259 (348)
T 1psw_A          180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILI  259 (348)
T ss_dssp             SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHH
T ss_pred             CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHH
Confidence            4456677776 4455553  3666665544  378999998766665555554332      3 4567888889999999


Q ss_pred             HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          249 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       249 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      +.||++|....    |..-+ |.++|+|+|+--
T Consensus       260 ~~a~l~I~~Ds----g~~Hl-Aaa~g~P~v~lf  287 (348)
T 1psw_A          260 AACKAIVTNDS----GLMHV-AAALNRPLVALY  287 (348)
T ss_dssp             HTSSEEEEESS----HHHHH-HHHTTCCEEEEE
T ss_pred             HhCCEEEecCC----HHHHH-HHHcCCCEEEEE
Confidence            99999997652    44444 999999999753

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=97.46  E-value=0.0001  Score=60.20  Aligned_cols=46  Identities=9%  Similarity=0.105  Sum_probs=38.5

Q ss_pred             CeEEecccChHHHHHHHH-hCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCC
Q 016648          232 PAVFTGMLLGEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  283 (385)
Q Consensus       232 ~i~~~g~~~~~~~~~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~  283 (385)
                      ++...+|+  +++..+|. .||++|    .-+..++++|++++|+|.|.-..+
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvI----shaGagTv~Eal~~G~P~IvVP~~  161 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVI----SHAGTGSILDSLRLNKPLIVCVND  161 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEE----ESSCHHHHHHHHHTTCCCCEECCS
T ss_pred             eEEEeecc--chHHHHHHhcCCEEE----ECCcHHHHHHHHHhCCCEEEEcCc
Confidence            45667777  89999999 999999    445688999999999999987654

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=97.23  E-value=0.011  Score=52.09  Aligned_cols=104  Identities=21%  Similarity=0.285  Sum_probs=70.4

Q ss_pred             CCcEEEEEeecccccc--HHHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCC---CeEEecccChHHHHHHHHhCcE
Q 016648          181 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDV  253 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~---~i~~~g~~~~~~~~~~~~~adi  253 (385)
                      ++.+.+..|.-...|.  .+.+.++++.+  .+.+++++|...+.+..++.....   .+.+.|..+-.++..+++.||+
T Consensus       185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~  264 (349)
T 3tov_A          185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNL  264 (349)
T ss_dssp             CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSE
T ss_pred             CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCE
Confidence            4455666776544554  34555555544  368888999777766666554432   3667788888999999999999


Q ss_pred             EEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCccc
Q 016648          254 FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  289 (385)
Q Consensus       254 ~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~  289 (385)
                      +|..-.    |..-+ |.++|+|+|+--.+..+...
T Consensus       265 ~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t~p~~~  295 (349)
T 3tov_A          265 LITNDS----GPMHV-GISQGVPIVALYGPSNPFFY  295 (349)
T ss_dssp             EEEESS----HHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred             EEECCC----CHHHH-HHhcCCCEEEEECCCCcccc
Confidence            997632    55556 89999999986444333333

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.05  E-value=0.016  Score=50.50  Aligned_cols=134  Identities=13%  Similarity=0.094  Sum_probs=80.8

Q ss_pred             CCcEEEEEeecccccc--HHHHHHHHHhC--CCceEEEE-eCCccHHHHHHHHcC-CCeEEecccChHHHHHHHHhCcEE
Q 016648          181 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVF  254 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~--~~~l~~a~~~~--~~~~l~i~-G~g~~~~~l~~~~~~-~~i~~~g~~~~~~~~~~~~~adi~  254 (385)
                      ++.+++..|.-...|.  .+.+.++++.+  .+.++++. |...+.+..++.... .++.+.|..+-.|+..+++.||++
T Consensus       178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~  257 (326)
T 2gt1_A          178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFV  257 (326)
T ss_dssp             TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEE
Confidence            3455666776555555  45777777766  46788887 533344444444433 256778888889999999999999


Q ss_pred             EEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeE-----eeCCCCHHHHHHHHhHhhcC
Q 016648          255 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY-----LFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       255 v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~-----~~~~~~~~~l~~~i~~ll~~  319 (385)
                      |..-.    |..-+ |.++|+|+|+--.+..+....+.......+     ....-+++++.+++.+++++
T Consensus       258 I~~DS----G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          258 VSVDT----GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EEESS----HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred             EecCC----cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence            97642    66666 777999999753222222211101111101     11223677888888777754

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}

Probab=89.10  E-value=5  Score=29.08  Aligned_cols=107  Identities=19%  Similarity=0.254  Sum_probs=67.2

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh---CcEEEEcCCC-C-CCcHHHHHHHh--cCCcEEEe
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSES-E-TLGLVVLEAMS--SGIPVVGV  280 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~---adi~v~ps~~-e-~~~~~~~Ea~a--~G~PvI~s  280 (385)
                      ..+++|+.+.+. ...+.......+..+...-+.++....+..   .|++++-... + .-|..+++.+.  ..+|+|.-
T Consensus         5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~l   84 (140)
T 3h5i_A            5 DKKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFL   84 (140)
T ss_dssp             -CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEE
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEE
Confidence            356777775543 344555555445555555555777776654   4888775443 3 44666666554  47888753


Q ss_pred             -cCCC---CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          281 -RAGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       281 -~~~~---~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                       ....   ..+..   ..|..+++..|-+.+++.++|..++.
T Consensus        85 s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~  123 (140)
T 3h5i_A           85 TAHTEPAVVEKIR---SVTAYGYVMKSATEQVLITIVEMALR  123 (140)
T ss_dssp             ESSSSCCCCGGGG---GSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---hCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence             3222   23344   56888999999999999999988864

>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}

Probab=88.45  E-value=5.4  Score=28.87  Aligned_cols=107  Identities=14%  Similarity=0.161  Sum_probs=64.2

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEE
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVG  279 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~  279 (385)
                      ..+++++.+.+. ...+.......++.+...-+.++....+..  .|++++-.. .+.-|..+++.+..     .+|+|.
T Consensus         7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~   86 (142)
T 3cg4_A            7 KGDVMIVDDDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVM   86 (142)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEE
T ss_pred             CCeEEEEcCCHHHHHHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEE
Confidence            456677765442 334444444334444444444666666665  467776543 23446677777654     467764


Q ss_pred             e-cCCC---CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          280 V-RAGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       280 s-~~~~---~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      - ....   ..+.+   ..|..+++..+-+.+++.+.|..++.
T Consensus        87 ~s~~~~~~~~~~~~---~~g~~~~l~kp~~~~~l~~~i~~~~~  126 (142)
T 3cg4_A           87 LTAKNAPDAKMIGL---QEYVVDYITKPFDNEDLIEKTTFFMG  126 (142)
T ss_dssp             EECTTCCCCSSTTG---GGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             EECCCCHHHHHHHH---hcCccEEEeCCCCHHHHHHHHHHHHH
Confidence            3 3322   23334   55678899999999999999988763

>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*

Probab=87.80  E-value=3  Score=31.26  Aligned_cols=72  Identities=17%  Similarity=0.153  Sum_probs=40.1

Q ss_pred             HHHHHhCcEEEEcCCCCCCcHHHHH---HHhcCCcEEEecCC----CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhh
Q 016648          245 SQAYASGDVFVMPSESETLGLVVLE---AMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  317 (385)
Q Consensus       245 ~~~~~~adi~v~ps~~e~~~~~~~E---a~a~G~PvI~s~~~----~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll  317 (385)
                      .+.+..||++|.-.. +.-+.+.+|   |.+.|+||++-..+    ...-.+.+..++..-.+.+..+ +++.+.|.+.+
T Consensus        63 ~~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~  140 (152)
T 4fyk_A           63 LNWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYF  140 (152)
T ss_dssp             HHHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHH
T ss_pred             HHHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHH
Confidence            467999999987433 333444444   78899999983221    2221221112222233344445 77777777765


Q ss_pred             c
Q 016648          318 Y  318 (385)
Q Consensus       318 ~  318 (385)
                      +
T Consensus       141 ~  141 (152)
T 4fyk_A          141 E  141 (152)
T ss_dssp             C
T ss_pred             H
Confidence            4

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}

Probab=86.95  E-value=4.6  Score=29.32  Aligned_cols=107  Identities=16%  Similarity=0.197  Sum_probs=66.5

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHH----hCcEEEEcCC-CCCCcHHHHHHHh---cCCcEEEe
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYA----SGDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~----~adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s  280 (385)
                      .+++|+.+.+. ...+.......+......-+.++....+.    ..|++++-.. .+.-|..+++.+.   ..+|+|.-
T Consensus         4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l   83 (143)
T 3jte_A            4 AKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIIL   83 (143)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence            46777775543 34455555544444444444467666665    4688777544 3344556665554   36777743


Q ss_pred             -cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          281 -RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       281 -~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                       .....   .+.+   ..|..+++..|.+.+++.++|..++..
T Consensus        84 s~~~~~~~~~~~~---~~g~~~~l~kp~~~~~l~~~l~~~~~~  123 (143)
T 3jte_A           84 TGHGDLDNAILAM---KEGAFEYLRKPVTAQDLSIAINNAINR  123 (143)
T ss_dssp             ECTTCHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---HhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence             33322   2334   567889999999999999999988754

>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}

Probab=86.95  E-value=3.6  Score=30.70  Aligned_cols=74  Identities=18%  Similarity=0.299  Sum_probs=46.9

Q ss_pred             HHHHHHHH----hCcEEEEcCC-CCCCcHHHHHHHh---cCCcEEEec-CCCC---CcccccCCCCCeeEeeCCCCHHHH
Q 016648          242 EELSQAYA----SGDVFVMPSE-SETLGLVVLEAMS---SGIPVVGVR-AGGI---PDIIPEDQDGKIGYLFNPGDLDDC  309 (385)
Q Consensus       242 ~~~~~~~~----~adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s~-~~~~---~e~~~~~~~~~~g~~~~~~~~~~l  309 (385)
                      ++....+.    ..|++++-.. .+.-|..+++.+.   ..+|+|... ....   .+.+   ..|..+++..+.+.+++
T Consensus        71 ~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l  147 (157)
T 3hzh_A           71 EEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCL---IKGAKTFIVKPLDRAKV  147 (157)
T ss_dssp             HHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHH---HTTCSEEEESSCCHHHH
T ss_pred             HHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHH---HcCCCEEEeCCCCHHHH
Confidence            45554444    3477776544 3334556665554   367887543 3222   2334   56778899999999999


Q ss_pred             HHHHhHhhc
Q 016648          310 LSKLEPLLY  318 (385)
Q Consensus       310 ~~~i~~ll~  318 (385)
                      .++|.+++.
T Consensus       148 ~~~i~~~l~  156 (157)
T 3hzh_A          148 LQRVMSVFV  156 (157)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHHhc
Confidence            999998764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=86.58  E-value=8.9  Score=30.90  Aligned_cols=76  Identities=11%  Similarity=-0.005  Sum_probs=47.1

Q ss_pred             CceEEEEeCCccHHHHHHHHcCCCeEEec-ccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCc
Q 016648          209 EARIAFIGDGPYREELEKMFTGMPAVFTG-MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  287 (385)
Q Consensus       209 ~~~l~i~G~g~~~~~l~~~~~~~~i~~~g-~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e  287 (385)
                      +.++.++... ..+.++.+....++.+.. ....+    .+..+|+++..+..+.....+.++...|+||-..|.+...+
T Consensus        54 GA~VtVvap~-~~~~l~~l~~~~~i~~i~~~~~~~----dL~~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p~~~~  128 (223)
T 3dfz_A           54 GAAITVVAPT-VSAEINEWEAKGQLRVKRKKVGEE----DLLNVFFIVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGN  128 (223)
T ss_dssp             CCCEEEECSS-CCHHHHHHHHTTSCEEECSCCCGG----GSSSCSEEEECCCCTHHHHHHHHHSCTTCEEEC-----CCS
T ss_pred             CCEEEEECCC-CCHHHHHHHHcCCcEEEECCCCHh----HhCCCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCcccCe
Confidence            5677777653 335577777666666543 33323    35789999887766666667777766899998888776655


Q ss_pred             cc
Q 016648          288 II  289 (385)
Q Consensus       288 ~~  289 (385)
                      ++
T Consensus       129 f~  130 (223)
T 3dfz_A          129 IQ  130 (223)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}

Probab=86.40  E-value=2.6  Score=30.90  Aligned_cols=107  Identities=10%  Similarity=0.122  Sum_probs=65.3

Q ss_pred             CceEEEEeCCc-cHHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEE
Q 016648          209 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVG  279 (385)
Q Consensus       209 ~~~l~i~G~g~-~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~  279 (385)
                      ..+++++.+.+ ....+.......++.+...-+.++....+..  .|++|+-.. .+.-|..+++.+..     ++|+|.
T Consensus         8 ~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~   87 (147)
T 2zay_A            8 WWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIA   87 (147)
T ss_dssp             CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEE
T ss_pred             CceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEE
Confidence            45677777544 3344444444334444444444666665554  688776544 33456777777764     578775


Q ss_pred             e-cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          280 V-RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       280 s-~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      - .....   .+.+   ..|..+++..+.+.+++.++|..++.
T Consensus        88 ls~~~~~~~~~~~~---~~g~~~~l~kp~~~~~L~~~i~~~~~  127 (147)
T 2zay_A           88 LSGRATAKEEAQLL---DMGFIDFIAKPVNAIRLSARIKRVLK  127 (147)
T ss_dssp             EESSCCHHHHHHHH---HHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EeCCCCHHHHHHHH---hCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence            4 33322   1223   45778899999999999999988865

>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}

Probab=86.02  E-value=6.8  Score=28.82  Aligned_cols=107  Identities=13%  Similarity=0.130  Sum_probs=64.6

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh---CcEEEEcCC-CCCCcHHHHHHHh---cCCcEEEe-
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV-  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~---adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s-  280 (385)
                      .+++|+.+.+. ...+...... +..+...-+.++....+..   .|++++-.. .+.-|..+++.+.   ..+|+|.. 
T Consensus         5 ~~ILivdd~~~~~~~l~~~L~~-~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s   83 (151)
T 3kcn_A            5 ERILLVDDDYSLLNTLKRNLSF-DFEVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLT   83 (151)
T ss_dssp             CEEEEECSCHHHHHHHHHHHTT-TSEEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEE
T ss_pred             CeEEEEeCCHHHHHHHHHHhcc-CceEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEE
Confidence            56777776543 3344444443 4444444445676666654   388876544 3444666666554   36777643 


Q ss_pred             cCCC---CCcccccCCCC-CeeEeeCCCCHHHHHHHHhHhhcCH
Q 016648          281 RAGG---IPDIIPEDQDG-KIGYLFNPGDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       281 ~~~~---~~e~~~~~~~~-~~g~~~~~~~~~~l~~~i~~ll~~~  320 (385)
                      ....   ..+.+   ..| ..+++..|-+.+++.++|..++...
T Consensus        84 ~~~~~~~~~~~~---~~g~~~~~l~KP~~~~~L~~~i~~~l~~~  124 (151)
T 3kcn_A           84 GNQDLTTAMEAV---NEGQVFRFLNKPCQMSDIKAAINAGIKQY  124 (151)
T ss_dssp             CGGGHHHHHHHH---HHTCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHH---HcCCeeEEEcCCCCHHHHHHHHHHHHHHH
Confidence            3222   12333   445 6789999999999999999987643

>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A

Probab=85.87  E-value=4.2  Score=29.34  Aligned_cols=72  Identities=14%  Similarity=0.171  Sum_probs=43.4

Q ss_pred             HHHHHHHHh--CcEEEEcCCCCCCcHHHHHHHh--c-CCcEEEe-cCCCC---CcccccCCCCCeeEeeCCC-CHHHHHH
Q 016648          242 EELSQAYAS--GDVFVMPSESETLGLVVLEAMS--S-GIPVVGV-RAGGI---PDIIPEDQDGKIGYLFNPG-DLDDCLS  311 (385)
Q Consensus       242 ~~~~~~~~~--adi~v~ps~~e~~~~~~~Ea~a--~-G~PvI~s-~~~~~---~e~~~~~~~~~~g~~~~~~-~~~~l~~  311 (385)
                      ++....+..  .|++++|   +.-|..+++.+.  . .+|+|.- .....   .+.+   ..|..+++..+- +.+++.+
T Consensus        52 ~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~---~~g~~~~l~kP~~~~~~l~~  125 (137)
T 2pln_A           52 EDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAF---EQGADDYIAKPYRSIKALVA  125 (137)
T ss_dssp             HHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHHHH---HTTCSEEEESSCSCHHHHHH
T ss_pred             HHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHH---HcCCceeeeCCCCCHHHHHH
Confidence            444444433  4666622   223455555554  3 6777753 33322   2333   567788999999 9999999


Q ss_pred             HHhHhhcC
Q 016648          312 KLEPLLYN  319 (385)
Q Consensus       312 ~i~~ll~~  319 (385)
                      +|..++..
T Consensus       126 ~i~~~~~~  133 (137)
T 2pln_A          126 RIEARLRF  133 (137)
T ss_dssp             HHHHHTC-
T ss_pred             HHHHHHhh
Confidence            99988754

>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1

Probab=85.81  E-value=6.3  Score=28.24  Aligned_cols=106  Identities=13%  Similarity=0.108  Sum_probs=66.0

Q ss_pred             ceEEEEeCCc-cHHHHHHHHcCCCe--EEecccChHHHHHHHHh---------CcEEEEcCCC-CCCcHHHHHHHh----
Q 016648          210 ARIAFIGDGP-YREELEKMFTGMPA--VFTGMLLGEELSQAYAS---------GDVFVMPSES-ETLGLVVLEAMS----  272 (385)
Q Consensus       210 ~~l~i~G~g~-~~~~l~~~~~~~~i--~~~g~~~~~~~~~~~~~---------adi~v~ps~~-e~~~~~~~Ea~a----  272 (385)
                      .+++++.+.+ ....+.......+.  .+...-+.++....+..         .|++++-... +.-|..+++.+.    
T Consensus         3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~   82 (140)
T 1k68_A            3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPT   82 (140)
T ss_dssp             CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTT
T ss_pred             CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcc
Confidence            4667777554 33455555555433  44444445777777764         6888775443 334666666665    


Q ss_pred             -cCCcEEEe-cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          273 -SGIPVVGV-RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       273 -~G~PvI~s-~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                       .++|+|.- .....   .+.+   ..|..+++..|-+.+++.+.+..++.
T Consensus        83 ~~~~pii~ls~~~~~~~~~~~~---~~g~~~~l~kP~~~~~l~~~i~~~~~  130 (140)
T 1k68_A           83 LKRIPVVVLSTSINEDDIFHSY---DLHVNCYITKSANLSQLFQIVKGIEE  130 (140)
T ss_dssp             GGGSCEEEEESCCCHHHHHHHH---HTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred             cccccEEEEecCCcHHHHHHHH---HhchhheecCCCCHHHHHHHHHHHHH
Confidence             45788754 33322   2233   55778999999999999999988754

>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*

Probab=85.43  E-value=4.8  Score=28.48  Aligned_cols=107  Identities=15%  Similarity=0.203  Sum_probs=63.6

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh---cCCcEEEe-
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV-  280 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s-  280 (385)
                      +.+++++.+.+. ...+.......+......-+.++....+..  .|++++-.. .+.-|..+++.+.   .++|+|.. 
T Consensus         3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s   82 (126)
T 1dbw_A            3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT   82 (126)
T ss_dssp             CCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEE
Confidence            356777775543 334444444334333333344666666654  477776433 2334556666654   36788753 


Q ss_pred             cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          281 RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       281 ~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      .....   .+.+   +.|..+++..|.+.+++.+++..++.
T Consensus        83 ~~~~~~~~~~~~---~~ga~~~l~Kp~~~~~l~~~i~~~~~  120 (126)
T 1dbw_A           83 GHGDVPMAVEAM---KAGAVDFIEKPFEDTVIIEAIERASE  120 (126)
T ss_dssp             CTTCHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHH---HhCHHHheeCCCCHHHHHHHHHHHHH
Confidence            33332   2333   56778999999999999999988765

>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A

Probab=85.05  E-value=4.4  Score=30.00  Aligned_cols=107  Identities=14%  Similarity=0.207  Sum_probs=61.8

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCCC-CCCcHHHHHHHh---cCCcEEEe-c
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSES-ETLGLVVLEAMS---SGIPVVGV-R  281 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~~-e~~~~~~~Ea~a---~G~PvI~s-~  281 (385)
                      .+++++.+.+. ...+.......+..+...-+.++....+..  .|++++-... +.-|..+++.+.   .++|+|.. .
T Consensus         4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~   83 (155)
T 1qkk_A            4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTG   83 (155)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEEC
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEEC
Confidence            45666665432 334444444344444433334555555443  5777765432 334555665553   36888754 3


Q ss_pred             CCC---CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          282 AGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       282 ~~~---~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      ...   ..+.+   ..|..+++..|.+.+++.+.+..++..
T Consensus        84 ~~~~~~~~~~~---~~g~~~~l~kP~~~~~L~~~i~~~~~~  121 (155)
T 1qkk_A           84 HGDIPMAVQAI---QDGAYDFIAKPFAADRLVQSARRAEEK  121 (155)
T ss_dssp             GGGHHHHHHHH---HTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHH---hcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence            222   22334   567789999999999999999988653

>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*

Probab=84.97  E-value=6.3  Score=34.48  Aligned_cols=83  Identities=6%  Similarity=-0.033  Sum_probs=56.6

Q ss_pred             HHHHHHHHhCcEEEEcC--CCC-CCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          242 EELSQAYASGDVFVMPS--ESE-TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps--~~e-~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ++..++++...+++..-  ... =..-++.+|+.+|+-.|.-..+...++++   .+.---+-+..+++++++.|..+-+
T Consensus       223 ~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~P---p~SfI~~~dF~s~~~La~yL~~L~~  299 (371)
T 2nzw_A          223 KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN---PKSFVNVHDFKNFDEAIDYIKYLHT  299 (371)
T ss_dssp             SCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSC---GGGSEEGGGSSSHHHHHHHHHHHHT
T ss_pred             ccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCC---CCceEEcccCCCHHHHHHHHHHHhc
Confidence            44567788888887653  222 34678999999996555554555666662   2222223355689999999999999


Q ss_pred             CHHHHHHHH
Q 016648          319 NQELRETMG  327 (385)
Q Consensus       319 ~~~~~~~~~  327 (385)
                      |++++.++-
T Consensus       300 n~~~Y~~y~  308 (371)
T 2nzw_A          300 HKNAYLDML  308 (371)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999887654

>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}

Probab=84.85  E-value=8.9  Score=27.56  Aligned_cols=108  Identities=16%  Similarity=0.115  Sum_probs=65.7

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEE
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVG  279 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~  279 (385)
                      ..+++|+.+.+. ...+.......+..+...-+.++....+..  .|++++-.. .+.-|..+++.+..     .+|+|.
T Consensus         6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~   85 (140)
T 3grc_A            6 RPRILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV   85 (140)
T ss_dssp             CSEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred             CCCEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence            356666665443 334444444444443333344666666554  477776544 34456777777664     678876


Q ss_pred             ecCCC----CC-cccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          280 VRAGG----IP-DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       280 s~~~~----~~-e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      -....    .. +..   ..|..+++..|.+.+++.++|..+++.
T Consensus        86 ~s~~~~~~~~~~~~~---~~g~~~~l~kP~~~~~l~~~i~~~l~~  127 (140)
T 3grc_A           86 VSANAREGELEFNSQ---PLAVSTWLEKPIDENLLILSLHRAIDN  127 (140)
T ss_dssp             ECTTHHHHHHHHCCT---TTCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred             EecCCChHHHHHHhh---hcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence            43321    11 334   567889999999999999999988753

>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C

Probab=84.59  E-value=6.3  Score=27.73  Aligned_cols=105  Identities=16%  Similarity=0.199  Sum_probs=62.7

Q ss_pred             eEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh-----cCCcEEEe-
Q 016648          211 RIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS-----SGIPVVGV-  280 (385)
Q Consensus       211 ~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a-----~G~PvI~s-  280 (385)
                      +++++.+.+. ...+.......+......-+.++..+.+..  .|++++-.. .+.-|..+++.+.     .++|+|.. 
T Consensus         4 ~ILivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s   83 (122)
T 3gl9_A            4 KVLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLT   83 (122)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEE
T ss_pred             eEEEEeCCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEe
Confidence            4556655432 233444444334444444444666666654  477776543 3344677777774     35788753 


Q ss_pred             cCCCCC---cccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          281 RAGGIP---DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       281 ~~~~~~---e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ..+...   +.+   +.|..+++..|-+.+++.+++.++++
T Consensus        84 ~~~~~~~~~~~~---~~Ga~~~l~KP~~~~~L~~~i~~~l~  121 (122)
T 3gl9_A           84 AKGGEEDESLAL---SLGARKVMRKPFSPSQFIEEVKHLLN  121 (122)
T ss_dssp             SCCSHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred             cCCchHHHHHHH---hcChhhhccCCCCHHHHHHHHHHHhc
Confidence            333222   233   56778999999999999999988764

>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}

Probab=84.12  E-value=9.2  Score=27.14  Aligned_cols=106  Identities=20%  Similarity=0.135  Sum_probs=63.7

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEEe
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVGV  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~s  280 (385)
                      .+++|+.+.+. ...+..... .+..+...-+.++....+..  .|++++-.. .+.-|..+++.+..     ++|+|..
T Consensus         5 ~~ilivdd~~~~~~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~   83 (133)
T 3nhm_A            5 PKVLIVENSWTMRETLRLLLS-GEFDCTTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFV   83 (133)
T ss_dssp             CEEEEECSCHHHHHHHHHHHT-TTSEEEEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHh-CCcEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEE
Confidence            46667765543 334444444 34444444444666666654  477776543 34456667776654     6788754


Q ss_pred             -cCCC--CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          281 -RAGG--IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       281 -~~~~--~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                       ....  ..+..   ..|..+++..|-+.+++.++|.+++..
T Consensus        84 s~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~~  122 (133)
T 3nhm_A           84 SGYAPRTEGPAD---QPVPDAYLVKPVKPPVLIAQLHALLAR  122 (133)
T ss_dssp             ESCCC-----TT---SCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred             eCCCcHhHHHHh---hcCCceEEeccCCHHHHHHHHHHHHhh
Confidence             2221  12333   667788999999999999999998753

>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}

Probab=84.10  E-value=4.8  Score=29.05  Aligned_cols=107  Identities=17%  Similarity=0.180  Sum_probs=63.8

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc--CCcEEEe-c
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS--GIPVVGV-R  281 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~--G~PvI~s-~  281 (385)
                      ..+++++.+.+. ...+.......+..+...-+.++....+..  .|++++-.. .+.-|..+++.+..  .+|+|.- .
T Consensus         4 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~   83 (136)
T 2qzj_A            4 QTKILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTY   83 (136)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEES
T ss_pred             CCeEEEEcCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEc
Confidence            356777776543 344555555444444333344566555554  577776433 22345666666643  5787754 3


Q ss_pred             CCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          282 AGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       282 ~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ....   .+.+   +.|..+++..|-+.+++.+++..++.
T Consensus        84 ~~~~~~~~~~~---~~ga~~~l~KP~~~~~L~~~l~~~~~  120 (136)
T 2qzj_A           84 INEDQSILNAL---NSGGDDYLIKPLNLEILYAKVKAILR  120 (136)
T ss_dssp             CCCHHHHHHHH---HTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHH---HcCCcEEEECCCCHHHHHHHHHHHHH
Confidence            3322   2334   56778999999999999999988754

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=83.53  E-value=0.98  Score=35.65  Aligned_cols=69  Identities=19%  Similarity=0.257  Sum_probs=41.7

Q ss_pred             HHHHHHHhCcEEEEcCCCCCCcH--HHHHHHhcCCcEEEecCCCCCc-----------ccccCCCCCeeEeeCCCCHHHH
Q 016648          243 ELSQAYASGDVFVMPSESETLGL--VVLEAMSSGIPVVGVRAGGIPD-----------IIPEDQDGKIGYLFNPGDLDDC  309 (385)
Q Consensus       243 ~~~~~~~~adi~v~ps~~e~~~~--~~~Ea~a~G~PvI~s~~~~~~e-----------~~~~~~~~~~g~~~~~~~~~~l  309 (385)
                      --.-+...||.+|...-  ++|+  .+.|++..|+||++-+..+..+           ++   .......+.-.+|++++
T Consensus       111 Rk~~m~~~sda~IvlpG--G~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi---~~~~~~~i~~~~~~ee~  185 (195)
T 1rcu_A          111 RSFVLLRNADVVVSIGG--EIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYL---DNRRIVEIHQAWTVEEA  185 (195)
T ss_dssp             HHHHHHTTCSEEEEESC--CHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBS---STTCCSCEEEESSHHHH
T ss_pred             HHHHHHHhCCEEEEecC--CCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcC---CHHHcCeEEEeCCHHHH
Confidence            34456677898775432  2333  5788999999999986543221           22   11222223334589999


Q ss_pred             HHHHhHh
Q 016648          310 LSKLEPL  316 (385)
Q Consensus       310 ~~~i~~l  316 (385)
                      .+.|.++
T Consensus       186 ~~~l~~~  192 (195)
T 1rcu_A          186 VQIIEQI  192 (195)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHH
Confidence            8888664

>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0

Probab=83.43  E-value=6.6  Score=28.29  Aligned_cols=107  Identities=18%  Similarity=0.244  Sum_probs=64.4

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEEe
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVGV  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~s  280 (385)
                      .+++++.+.+. ...+.......+..+...-+.++..+.+..  .|++++-.. .+.-|..+++.+..     .+|+|..
T Consensus         5 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~   84 (136)
T 3t6k_A            5 HTLLIVDDDDTVAEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILML   84 (136)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEE
T ss_pred             CEEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEE
Confidence            45666665442 334444444444444444444666665554  477776544 33446667766643     5788754


Q ss_pred             -cCCCCC---cccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          281 -RAGGIP---DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       281 -~~~~~~---e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                       ......   +.+   ..|..+++..|-+.+++.+++.+++..
T Consensus        85 t~~~~~~~~~~~~---~~ga~~~l~KP~~~~~L~~~i~~~l~~  124 (136)
T 3t6k_A           85 TAQGDISAKIAGF---EAGANDYLAKPFEPQELVYRVKNILAR  124 (136)
T ss_dssp             ECTTCHHHHHHHH---HHTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred             ecCCCHHHHHHHH---hcCcceEEeCCCCHHHHHHHHHHHHhc
Confidence             333222   223   457788999999999999999988764

>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}

Probab=83.26  E-value=7.4  Score=28.69  Aligned_cols=109  Identities=16%  Similarity=0.179  Sum_probs=64.6

Q ss_pred             CCceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh---cCCcEEEe
Q 016648          208 PEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV  280 (385)
Q Consensus       208 ~~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s  280 (385)
                      ...+++|+.+.+. ...+.......++.+...-+.++....+..  .|++++-.. .+.-|..+++.+.   ..+|+|.-
T Consensus         6 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l   85 (154)
T 2rjn_A            6 KNYTVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVI   85 (154)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred             CCCeEEEEcCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence            3456777775543 344555555445444444444666666654  477776543 2334555666553   36787753


Q ss_pred             -cCCC---CCcccccCCCC-CeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          281 -RAGG---IPDIIPEDQDG-KIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       281 -~~~~---~~e~~~~~~~~-~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                       ....   ..+.+   ..| ..+++..|-+.+++.++|..++..
T Consensus        86 s~~~~~~~~~~~~---~~g~~~~~l~kP~~~~~L~~~i~~~~~~  126 (154)
T 2rjn_A           86 SGYADAQATIDAV---NRGKISRFLLKPWEDEDVFKVVEKGLQL  126 (154)
T ss_dssp             ECGGGHHHHHHHH---HTTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred             ecCCCHHHHHHHH---hccchheeeeCCCCHHHHHHHHHHHHHH
Confidence             3222   12223   344 678999999999999999888653

>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}

Probab=83.20  E-value=7.3  Score=28.81  Aligned_cols=107  Identities=17%  Similarity=0.174  Sum_probs=66.3

Q ss_pred             CceEEEEeCCc-cHHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh-----cCCcEEE
Q 016648          209 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS-----SGIPVVG  279 (385)
Q Consensus       209 ~~~l~i~G~g~-~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a-----~G~PvI~  279 (385)
                      ..+++|+.+.+ ....+.......+..+...-+.++....+..  .|++++-.. .+.-|..+++.+.     ..+|+|.
T Consensus         7 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~   86 (154)
T 3gt7_A            7 AGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVIL   86 (154)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEE
T ss_pred             CCcEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEE
Confidence            35677776544 2344555555545444444444666666654  477776544 3344667777765     3678875


Q ss_pred             ec-CCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          280 VR-AGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       280 s~-~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      .. ....   .+.+   ..|..+++..|-+.+++.+++..++.
T Consensus        87 ~s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~  126 (154)
T 3gt7_A           87 LTILSDPRDVVRSL---ECGADDFITKPCKDVVLASHVKRLLS  126 (154)
T ss_dssp             EECCCSHHHHHHHH---HHCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EECCCChHHHHHHH---HCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence            43 2322   2233   45778899999999999999998875

>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}

Probab=82.19  E-value=10  Score=27.34  Aligned_cols=109  Identities=7%  Similarity=0.007  Sum_probs=66.5

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCe--EEecccChHHHHHHHHh-------CcEEEEcCC-CCCCcHHHHHHHhc-----
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPA--VFTGMLLGEELSQAYAS-------GDVFVMPSE-SETLGLVVLEAMSS-----  273 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i--~~~g~~~~~~~~~~~~~-------adi~v~ps~-~e~~~~~~~Ea~a~-----  273 (385)
                      .+++|+.+.+. ...+.......+.  .+...-+.++....+..       .|++++-.. .+.-|..+++.+..     
T Consensus        10 ~~iLivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~   89 (146)
T 3ilh_A           10 DSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPM   89 (146)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGG
T ss_pred             ceEEEEeCCHHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhc
Confidence            46667765543 3445555554443  44444444677777765       688887544 34456667766554     


Q ss_pred             --CCcEEEecC-CCC---CcccccCCCC-CeeEeeCCCCHHHHHHHHhHhhcCHH
Q 016648          274 --GIPVVGVRA-GGI---PDIIPEDQDG-KIGYLFNPGDLDDCLSKLEPLLYNQE  321 (385)
Q Consensus       274 --G~PvI~s~~-~~~---~e~~~~~~~~-~~g~~~~~~~~~~l~~~i~~ll~~~~  321 (385)
                        .+|+|.... ...   .+..   ..+ ..+++..|-+.+++.++|.+......
T Consensus        90 ~~~~~ii~~t~~~~~~~~~~~~---~~g~~~~~l~KP~~~~~L~~~i~~~~~~~~  141 (146)
T 3ilh_A           90 KNKSIVCLLSSSLDPRDQAKAE---ASDWVDYYVSKPLTANALNNLYNKVLNEGH  141 (146)
T ss_dssp             TTTCEEEEECSSCCHHHHHHHH---HCSSCCEEECSSCCHHHHHHHHHHHHCC--
T ss_pred             cCCCeEEEEeCCCChHHHHHHH---hcCCcceeeeCCCCHHHHHHHHHHHHHhcc
Confidence              577765433 222   2223   445 77899999999999999999887543

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=82.06  E-value=17  Score=28.61  Aligned_cols=262  Identities=15%  Similarity=0.143  Sum_probs=143.6

Q ss_pred             HHHHHHhhccCCCEEEeCCCchhHHH-H--HHHHHH-----hCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHh
Q 016648           53 PRIISEVARFKPDIIHASSPGIMVFG-A--LIIAKL-----LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  124 (385)
Q Consensus        53 ~~l~~~i~~~~pDiI~~~~~~~~~~~-~--~~~~~~-----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (385)
                      .+..+++  ...|++++++.+..... +  --.++.     ..+++|+.-|++......+..          -.....++
T Consensus        67 dkalklv--ndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnl----------gleetvrr  134 (401)
T 1xv5_A           67 DKALKLV--NDCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRNL----------GLEETVRR  134 (401)
T ss_dssp             HHHHHHH--TSCSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTBS----------SHHHHHHH
T ss_pred             HHHhhhh--ccCcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhhc----------ChHHhhhh
Confidence            3444444  35699888754222211 1  111222     356788888986533221111          12346788


Q ss_pred             CCeEEEcChh---HHHHHHHhcccCCCcEEEeeCCCCC----CCCCCCCCChhhHhhhcCCCCCC---cEEEEEeecccc
Q 016648          125 ADLTLVPSVA---IGKDLEAARVTAANKIRIWKKGVDS----ESFHPRFRSSEMRWRLSNGEPDK---PLIVHVGRLGVE  194 (385)
Q Consensus       125 ad~ii~~s~~---~~~~~~~~~~~~~~~i~vi~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~G~~~~~  194 (385)
                      ||.++..|+.   .+-.+++.++   +.+.... .++.    -.|.|.......+... ...-..   .+--++|+...+
T Consensus       135 advifshsdngdfnkvlmkewyp---etvslfd-dieeaptvynfqppmdivkvrsty-wkdvseinmninrwigrtttw  209 (401)
T 1xv5_A          135 ADVIFSHSDNGDFNKVLMKEWYP---ETVSLFD-DIEEAPTVYNFQPPMDIVKVRSTY-WKDVSEINMNINRWIGRTTTW  209 (401)
T ss_dssp             CSEEEESCTTSHHHHTHHHHHSC---SSCCSSS-CCCCCCCEEECCCCBCHHHHHHHH-CCCGGGCEEEEEEEECCSCGG
T ss_pred             hceEEecCCCCcHHHHHHHhhcc---chhhhhc-chhhCCceeccCCCceeeeeehhh-hccHHHhhcchhhhhcccchh
Confidence            9999998863   2233344443   1111110 0100    0122222211111111 111111   233489999999


Q ss_pred             ccHHHHHHHHHhC--CC-ceEEEEeCCccHHHHHHHHcCC-------------------CeEEecccChHHHHHHHHhCc
Q 016648          195 KSLDFLKRVMDRL--PE-ARIAFIGDGPYREELEKMFTGM-------------------PAVFTGMLLGEELSQAYASGD  252 (385)
Q Consensus       195 k~~~~l~~a~~~~--~~-~~l~i~G~g~~~~~l~~~~~~~-------------------~i~~~g~~~~~~~~~~~~~ad  252 (385)
                      ||.-.+.+.-+++  |. -.-++-|-......+.-.-+..                   .-.++...-+.++.+-|+.+.
T Consensus       210 kgfyqmfdfhekflkpagkstvmeglerspafiaikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksg  289 (401)
T 1xv5_A          210 KGFYQMFDFHEKFLKPAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEMLERMSKSG  289 (401)
T ss_dssp             GCHHHHHHHHHHTTTTTTCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHHHHTEE
T ss_pred             HhHHHHhhHHHHhcCccchhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhheecHHHHHHhhhcC
Confidence            9999998887776  32 2334444222111111111111                   234555555678999999999


Q ss_pred             EEEEcCC------CCCCcHHHHHHHhcCCcEEEec-CCC-------CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          253 VFVMPSE------SETLGLVVLEAMSSGIPVVGVR-AGG-------IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       253 i~v~ps~------~e~~~~~~~Ea~a~G~PvI~s~-~~~-------~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      +....|.      ....-.+-+|--+||+-.|-.. .|.       ...+.   .+....+.++.+|.++-.+.|.++.+
T Consensus       290 fgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntplt---shdsgiiwfdendmestferikelss  366 (401)
T 1xv5_A          290 FGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLT---SHDSGIIWFDENDMESTFERIKELSS  366 (401)
T ss_dssp             EEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGG---GSCCSCEEECTTCHHHHHHHHHHHHT
T ss_pred             cccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCccc---ccCCceEEecCCchHHHHHHHHHhcc
Confidence            8877664      2356778999999996555332 111       11122   23333467888999999999999999


Q ss_pred             CHHHHHHHHHHHHHHH
Q 016648          319 NQELRETMGQAARQEM  334 (385)
Q Consensus       319 ~~~~~~~~~~~a~~~~  334 (385)
                      |..++.+-+++|++++
T Consensus       367 dralydrerekayefl  382 (401)
T 1xv5_A          367 DRALYDREREKAYEFL  382 (401)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             chhhhhHHHHHHHHHH
Confidence            9999998888888876

>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}

Probab=81.35  E-value=13  Score=26.73  Aligned_cols=111  Identities=19%  Similarity=0.208  Sum_probs=63.4

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHhc-----CCcEEEe
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVGV  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~s  280 (385)
                      .+++++.+.+. ...+.......+..+...-+.++....+..  .|++++-.. .+.-|..+++.+..     .+|+|..
T Consensus         4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~l   83 (138)
T 3c3m_A            4 YTILVVDDSPMIVDVFVTMLERGGYRPITAFSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLML   83 (138)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEE
Confidence            35666665543 334444444344444434444666666554  578776543 23446677777753     5788743


Q ss_pred             -cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCH
Q 016648          281 -RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       281 -~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~  320 (385)
                       ..............+..+++..|.+.+++.+++..++...
T Consensus        84 s~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~~~~~  124 (138)
T 3c3m_A           84 TAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARR  124 (138)
T ss_dssp             ESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHHSCC
T ss_pred             ECCCChHHHHHHhhcCHhheEeCCCCHHHHHHHHHHHHHHh
Confidence             3332221111112234689999999999999999887643

>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}

Probab=81.25  E-value=8.7  Score=27.57  Aligned_cols=109  Identities=16%  Similarity=0.159  Sum_probs=66.8

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHhC--cEEEEcCCC------CCCcHHHHHHHh---cCCc
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASG--DVFVMPSES------ETLGLVVLEAMS---SGIP  276 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~a--di~v~ps~~------e~~~~~~~Ea~a---~G~P  276 (385)
                      ..+++++.+.+. ...+.......+..+...-+.++....+...  |++++-...      +.-|..+++.+.   .++|
T Consensus         3 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~   82 (140)
T 2qr3_A            3 LGTIIIVDDNKGVLTAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLP   82 (140)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCC
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCC
Confidence            356777775543 3455555555555554444446777776654  666664332      334555665554   4678


Q ss_pred             EEEe-cCCC---CCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCH
Q 016648          277 VVGV-RAGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       277 vI~s-~~~~---~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~  320 (385)
                      +|.. ....   ..+.+   ..|..+++..+-+.+++.+++..++...
T Consensus        83 ii~ls~~~~~~~~~~~~---~~g~~~~l~kp~~~~~l~~~l~~~~~~~  127 (140)
T 2qr3_A           83 VVLFTAYADIDLAVRGI---KEGASDFVVKPWDNQKLLETLLNAASQA  127 (140)
T ss_dssp             EEEEEEGGGHHHHHHHH---HTTCCEEEEESCCHHHHHHHHHHHHTCC
T ss_pred             EEEEECCCCHHHHHHHH---HcCchheeeCCCCHHHHHHHHHHHHHhc
Confidence            8753 2222   22334   5677889999999999999999987653

>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0

Probab=80.42  E-value=14  Score=26.55  Aligned_cols=106  Identities=17%  Similarity=0.239  Sum_probs=61.5

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh-----cCCcEEEe
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS-----SGIPVVGV  280 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a-----~G~PvI~s  280 (385)
                      .+++|+.+.+. ...+....... ..+...-+.++....+..  .|++++-.. .+.-|..+++.+.     .++|+|..
T Consensus         4 ~~iLivdd~~~~~~~l~~~l~~~-~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~   82 (140)
T 3n53_A            4 KKILIIDQQDFSRIELKNFLDSE-YLVIESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILL   82 (140)
T ss_dssp             CEEEEECSCHHHHHHHHHHHTTT-SEEEEESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEE
T ss_pred             CEEEEEeCCHHHHHHHHHHHHhc-ceEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEE
Confidence            45667765443 34455555444 444444444666665544  577776543 2333555666655     46788743


Q ss_pred             -cCC---CCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          281 -RAG---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       281 -~~~---~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                       ...   ...+.+   ..|..+++..|.+.+++.+++..++..
T Consensus        83 s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~~~~  122 (140)
T 3n53_A           83 FSSEHKEAIVNGL---HSGADDYLTKPFNRNDLLSRIEIHLRT  122 (140)
T ss_dssp             ECC----CTTTTT---TCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred             ecCCCHHHHHHHH---hcCCCeeeeCCCCHHHHHHHHHHHHhh
Confidence             322   223344   667789999999999999999988753

>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0

Probab=80.14  E-value=14  Score=26.36  Aligned_cols=109  Identities=17%  Similarity=0.207  Sum_probs=65.4

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh---CcEEEEcCC-CCCCcHHHHHHHhc----CCcEEE
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSE-SETLGLVVLEAMSS----GIPVVG  279 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~---adi~v~ps~-~e~~~~~~~Ea~a~----G~PvI~  279 (385)
                      ..+++|+.+.+. ...+.......++.+...-+.++....+..   .|++++-.. .+.-|..+++.+..    .+|+|.
T Consensus         7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~   86 (136)
T 3hdv_A            7 RPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIV   86 (136)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEE
T ss_pred             CCeEEEECCCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEE
Confidence            356777775543 334444444444444444444666555543   467766543 34456677777654    467775


Q ss_pred             e-cCCCC---CcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCH
Q 016648          280 V-RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       280 s-~~~~~---~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~  320 (385)
                      . .....   .+.+   ..|..+++..|-+.+++.++|.++....
T Consensus        87 ~s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~~~~~  128 (136)
T 3hdv_A           87 VSGDTDVEEAVDVM---HLGVVDFLLKPVDLGKLLELVNKELKIG  128 (136)
T ss_dssp             EESSCCHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred             EeCCCChHHHHHHH---hCCcceEEeCCCCHHHHHHHHHHHhcCc
Confidence            4 33322   2334   5678899999999999999999987754

>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}

Probab=80.04  E-value=9.1  Score=27.45  Aligned_cols=107  Identities=11%  Similarity=0.041  Sum_probs=63.1

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecc-cChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh-cCCcEEE-ec
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGM-LLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS-SGIPVVG-VR  281 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~-~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a-~G~PvI~-s~  281 (385)
                      ..+++|+-+.+. ...+.......+....+. -+.++..+.++.  -|++++--. .+.-|..+++.+. .++|||. |.
T Consensus         8 ~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa   87 (123)
T 2lpm_A            8 RLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG   87 (123)
T ss_dssp             CCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence            456777765443 344444444434444433 233666666655  477776433 2334666666653 5789874 33


Q ss_pred             CCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          282 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       282 ~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      .+......   +.+..+++.+|-+.+++.+++.+++.
T Consensus        88 ~~~~~~~~---~~g~~~yl~KP~~~~~L~~~l~~~~~  121 (123)
T 2lpm_A           88 YGSKGLDT---RYSNIPLLTKPFLDSELEAVLVQISK  121 (123)
T ss_dssp             TCTTSCCS---SSCSCSCBCSSSSHHHHHHHHSTTCS
T ss_pred             CccHHHHH---hCCCCcEEECCCCHHHHHHHHHHHHh
Confidence            33222222   45677899999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	385
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	5e-23
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	4e-22
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	1e-19
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	4e-12
d2bfwa1	196	c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py	3e-07

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 98.2 bits (243), Expect = 5e-23
 Identities = 58/382 (15%), Positives = 113/382 (29%), Gaps = 61/382 (15%)

Query: 22  DLFFWILNFFH--HIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHA-SSPGIMVFG 78
             +      +       +P  W +   LSLA +      +  ++PD++HA      M   
Sbjct: 87  AYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPV 146

Query: 79  ALIIAKLLCVPIVMSYHTHVPVYI-PRYTFSWLVKPMWL-------------VIKFLHRA 124
            +  A+   +P +++ H            FS L  P                 +K   + 
Sbjct: 147 YMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT 206

Query: 125 ADLTLVPSVAI---------GKDLEAARVTAANKIRIWKKGVDSESFHPR---------- 165
           A      S +          G  LE    + A+ +     G+D++ ++P           
Sbjct: 207 ATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYS 266

Query: 166 --------FRSSEMRWRLSNGEPDKPLIVHVGR----LGVEKSLDFLKRVMDRLPEARIA 213
                        +       +   PL   + R     G++   + +  ++       + 
Sbjct: 267 AANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL 326

Query: 214 FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQA--YASGDVFVMPSESETLGLVVLEAM 271
             GD      L    +         +   E       A  D  ++PS  E  GL  L A+
Sbjct: 327 GAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYAL 386

Query: 272 SSGIPVVGVRAGGIPDIIPEDQDGKI------GYLFNPGD---LDDCLSKLEPLLYNQEL 322
             G   V  R GG+ D + +     +      G  F+P     L   + +     ++ +L
Sbjct: 387 RYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKL 446

Query: 323 RETMGQAARQEMEKYDWRAATR 344
              M +   +      W  +  
Sbjct: 447 WTQMQKLGMK--SDVSWEKSAG 466

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 94.9 bits (234), Expect = 4e-22
 Identities = 69/362 (19%), Positives = 118/362 (32%), Gaps = 34/362 (9%)

Query: 22  DLFFWILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVA-----RFKPDIIHASSPGIMV 76
            ++            +   W   +  ++      +  +         PD++H      + 
Sbjct: 74  RIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVF 133

Query: 77  FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL------VIKFLHRAADLTLV 130
            GALI  K   +P V + H      +P + F                       AD+   
Sbjct: 134 AGALIK-KYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTT 192

Query: 131 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSN-----GEPDKPLI 185
            S     D          KI     G+D   ++  + +     R  +     G  +    
Sbjct: 193 VSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTF 252

Query: 186 VHVGRLGV-EKSLDFLKRVMDRL------PEARIAFIGDGPYREELEKM----FTGMPAV 234
           + +GR    +K +D L + ++ L       E R   IG G    E          G   V
Sbjct: 253 MFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKV 312

Query: 235 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD 294
            T ML  E + + Y S D  ++PS  E  GLV LEAM  G   +    GG+ DII     
Sbjct: 313 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII----T 368

Query: 295 GKIGYLFNPGDLDDCLSKLEPLL-YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA 353
            + G L   GD  +  + +   L  ++       +  ++    + W  +      + Y  
Sbjct: 369 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTG 427

Query: 354 AI 355
           +I
Sbjct: 428 SI 429

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 87.6 bits (216), Expect = 1e-19
 Identities = 51/370 (13%), Positives = 103/370 (27%), Gaps = 55/370 (14%)

Query: 24  FFW-ILNFFHHIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALII 82
             W   ++   +  F  P +       AL    +  + +   DII      ++ F   + 
Sbjct: 83  VLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQ-DDDIIWIHDYHLLPFAHELR 141

Query: 83  AKLLCVPIVMSYHTHVPVYIPRYTFSW--------LVKPMWLVIKFLHRAADLTLVPSVA 134
            + +   I    H   P                      +        R A L  + ++ 
Sbjct: 142 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLT 201

Query: 135 IGKDLEAARVTAAN---KIRIWKKGVDSESFHPRFRSSEMRW--RLSNGEPDKPLIVHVG 189
                 A   TA     +  ++  G++ +    +          +L     +   I  V 
Sbjct: 202 RVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVE 261

Query: 190 RLGVEKSLDFLKRVMDRLPE------ARIAFIGDGP-----------YREELEKMFTGMP 232
           RL   K L       + L E       +I +    P            R +LE     + 
Sbjct: 262 RLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRIN 321

Query: 233 AVF-----------TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----- 276
             +                 + L + +   DV ++    + + LV  E +++  P     
Sbjct: 322 GKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381

Query: 277 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEME 335
           +V  +  G  + +          + NP D D+  + L+  L  +   R +        + 
Sbjct: 382 LVLSQFAGAANELTS------ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIV 435

Query: 336 KYDWRAATRT 345
           K D       
Sbjct: 436 KNDINHWQEC 445

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 64.6 bits (155), Expect = 4e-12
 Identities = 40/323 (12%), Positives = 93/323 (28%), Gaps = 13/323 (4%)

Query: 33  HIYSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM 92
            +   P   +     +      + + +     D +   +           A +     V 
Sbjct: 49  ELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPG-LDVYFAADVCYAEKVA 107

Query: 93  SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 152
                +     RY      +          ++  L ++    I    +  +        +
Sbjct: 108 QEKGFLYRLTSRYRHYAAFERATF---EQGKSTKLMMLTDKQIADFQKHYQTEPERFQIL 164

Query: 153 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 212
                    +  +  +S   +R  NG  ++  ++        +                +
Sbjct: 165 PPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESL 224

Query: 213 AFI-------GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL 265
                      D P + E      G+ +         ++S+  A+ D+ + P+  E  G+
Sbjct: 225 RHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGI 284

Query: 266 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET 325
           V+LEA+++G+PV+     G    I +   G +  +  P   +     L   L    LR  
Sbjct: 285 VLLEAITAGLPVLTTAVCGYAHYIADANCGTV--IAEPFSQEQLNEVLRKALTQSPLRMA 342

Query: 326 MGQAARQEMEKYDWRAATRTIRN 348
             + AR   +  D  +      +
Sbjct: 343 WAENARHYADTQDLYSLPEKAAD 365

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 48.3 bits (113), Expect = 3e-07
 Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 21/199 (10%)

Query: 156 GVDSESFHPRFRSSEMRWRLSN-----GEPDKPLIVHVGRLGV-EKSLDFLKRVMDR--- 206
           G+D   ++  + +     R  +     G  +    + +GR    +K +D L + ++    
Sbjct: 1   GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60

Query: 207 ---LPEARIAFIGDGPYREELEKMFTGMP----AVFTGMLLGEELSQAYASGDVFVMPSE 259
                E R   IG G    E              V T ML  E + + Y S D  ++PS 
Sbjct: 61  KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY 120

Query: 260 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-Y 318
            E  GLV LEAM  G   +    GG+ DI       + G L   GD  +  + +   L  
Sbjct: 121 FEPFGLVALEAMCLGAIPIASAVGGLRDI----ITNETGILVKAGDPGELANAILKALEL 176

Query: 319 NQELRETMGQAARQEMEKY 337
           ++       +  ++    +
Sbjct: 177 SRSDLSKFRENCKKRAMSF 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	385
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.95
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.94
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.93
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.33
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.2
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.12
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	98.97
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.59
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	98.53
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	98.39
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	98.34
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	98.32
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	97.99
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	97.92
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	97.45
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	97.42
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	97.14
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.69
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	91.61
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	90.21
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	89.55
d2nzwa1	349	Alpha1,3-fucosyltransferase FucT {Helicobacter pyl	88.47
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	85.3
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	84.34
d1qkka_	140	Transcriptional regulatory protein DctD, receiver	80.71
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	80.29
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	80.15

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.7e-37  Score=284.88  Aligned_cols=290  Identities=19%  Similarity=0.221  Sum_probs=214.9

Q ss_pred             hccCCCEEEeCCCchhHHHH-HHHHHHhCCCEEEEEecCCCccc-ccccccc-------------cchhHHHHHHHHHHh
Q 016648           60 ARFKPDIIHASSPGIMVFGA-LIIAKLLCVPIVMSYHTHVPVYI-PRYTFSW-------------LVKPMWLVIKFLHRA  124 (385)
Q Consensus        60 ~~~~pDiI~~~~~~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~~  124 (385)
                      ..++|||||+|++....... +..++..++|+|+|+|+...... .......             .........+.....
T Consensus       127 ~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (477)
T d1rzua_         127 PGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT  206 (477)
T ss_dssp             SSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH
T ss_pred             cCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHh
Confidence            34699999999863333222 22334567999999998532211 0000000             000001145667788


Q ss_pred             CCeEEEcChhHHHHHHHh---------cccCCCcEEEeeCCCCCCCCCCCCCC------------------hhhHhhhcC
Q 016648          125 ADLTLVPSVAIGKDLEAA---------RVTAANKIRIWKKGVDSESFHPRFRS------------------SEMRWRLSN  177 (385)
Q Consensus       125 ad~ii~~s~~~~~~~~~~---------~~~~~~~i~vi~~~v~~~~~~~~~~~------------------~~~~~~~~~  177 (385)
                      +|.++++|....+.....         ......++.+|+||+|.+.|.|....                  .....+...
T Consensus       207 ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  286 (477)
T d1rzua_         207 ATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI  286 (477)
T ss_dssp             CSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC
T ss_pred             hhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccc
Confidence            999999999877754321         11234589999999999887664221                  112223333


Q ss_pred             CCCCCcEEEEEeeccccccHHHHHHHHHhC--CCceEEEEeCCccHHH--HHHHHc--CCCeEEecccChHHHHHHHHhC
Q 016648          178 GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYREE--LEKMFT--GMPAVFTGMLLGEELSQAYASG  251 (385)
Q Consensus       178 ~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~--~~~~l~i~G~g~~~~~--l~~~~~--~~~i~~~g~~~~~~~~~~~~~a  251 (385)
                      ..++.++|+++|++.+.||++.+++++.++  .+.+++++|.|+....  +.....  ..++.+.+..+.++...+|+.|
T Consensus       287 ~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a  366 (477)
T d1rzua_         287 DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGC  366 (477)
T ss_dssp             CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHC
T ss_pred             ccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhC
Confidence            445678999999999999999999999876  5789999998864332  222222  3479999999999999999999


Q ss_pred             cEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCC---------eeEeeCCCCHHHHHHHHhHhhc---C
Q 016648          252 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGK---------IGYLFNPGDLDDCLSKLEPLLY---N  319 (385)
Q Consensus       252 di~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~---------~g~~~~~~~~~~l~~~i~~ll~---~  319 (385)
                      |++|+||..|++|++++|||+||+|||+|+.||++|++   .++.         +|+++++.|+++|+++|.++++   |
T Consensus       367 D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v---~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~  443 (477)
T d1rzua_         367 DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTV---IDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD  443 (477)
T ss_dssp             SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC
T ss_pred             ccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCccee---ecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCC
Confidence            99999999999999999999999999999999999999   6654         8999999999999999988775   8


Q ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 016648          320 QELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  355 (385)
Q Consensus       320 ~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~  355 (385)
                      ++.++++++++.+  ++|||+++++++. ++|++++
T Consensus       444 ~~~~~~~~~~a~~--~~fsw~~~a~~~~-~lY~~ll  476 (477)
T d1rzua_         444 PKLWTQMQKLGMK--SDVSWEKSAGLYA-ALYSQLI  476 (477)
T ss_dssp             HHHHHHHHHHHHT--CCCBHHHHHHHHH-HHHHHHT
T ss_pred             HHHHHHHHHHHHH--hhCCHHHHHHHHH-HHHHHHh
Confidence            8888888877742  4699999999997 7999986

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=1.9e-35  Score=271.73  Aligned_cols=289  Identities=22%  Similarity=0.285  Sum_probs=225.1

Q ss_pred             cCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccc------cccchhHHHHHHHHHHhCCeEEEcChhH
Q 016648           62 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF------SWLVKPMWLVIKFLHRAADLTLVPSVAI  135 (385)
Q Consensus        62 ~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ad~ii~~s~~~  135 (385)
                      ..|||||+|++.. .+.+..+++..++|+++++|+......+....      ..........++.....+|.+++.+...
T Consensus       119 ~~pDiIh~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~  197 (437)
T d2bisa1         119 PLPDVVHFHDWHT-VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGY  197 (437)
T ss_dssp             CCCSEEEEETGGG-HHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHH
T ss_pred             CCCCEEEECChhh-hhHhhhhhccccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhh
Confidence            3689999998744 44456677889999999999976543322111      0000001124566778899999999988


Q ss_pred             HHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChh-----hHhhhcCCCCCCcEEEEEeeccc-cccHHHHHHHHHhC--
Q 016648          136 GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE-----MRWRLSNGEPDKPLIVHVGRLGV-EKSLDFLKRVMDRL--  207 (385)
Q Consensus       136 ~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~G~~~~-~k~~~~l~~a~~~~--  207 (385)
                      .......+.....++.+++||+|.+.+.+......     ..........++++++++|++.. .||++.+++|+..+  
T Consensus       198 ~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~  277 (437)
T d2bisa1         198 LIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS  277 (437)
T ss_dssp             HHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred             hhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhccccc
Confidence            87766666556789999999999998866432211     11112233456789999999964 69999999999764  


Q ss_pred             ----CCceEEEEeCCccHH--HHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEE
Q 016648          208 ----PEARIAFIGDGPYRE--ELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  279 (385)
Q Consensus       208 ----~~~~l~i~G~g~~~~--~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~  279 (385)
                          ++++++++|.|+...  .++.+...  ..+.+.|.++.+++..+++.||++++||..|++|++++|||+||+|||+
T Consensus       278 ~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~  357 (437)
T d2bisa1         278 KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA  357 (437)
T ss_dssp             SGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEE
T ss_pred             ccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEE
Confidence                578999999876432  23333322  2467889999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  356 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~iy~~~~~  356 (385)
                      ++.|+..|++   ++ .+|++++++|+++++++|.++++ |++.++++++++++.+++|||++++++++ ++|+++++
T Consensus       358 ~~~g~~~e~i---~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~-~iY~~~i~  430 (437)
T d2bisa1         358 SAVGGLRDII---TN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSID  430 (437)
T ss_dssp             ESCTTHHHHC---CT-TTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHH-HHHHTCSC
T ss_pred             eCCCCcHHhE---EC-CcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHH
Confidence            9999999988   54 57999999999999999999886 67888999999999988899999999998 69998864

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-32  Score=242.07  Aligned_cols=220  Identities=18%  Similarity=0.226  Sum_probs=179.4

Q ss_pred             HhCCeEEEcChhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCC--hhhHhhhcCCCCCCcEEEEEeeccccccHHHH
Q 016648          123 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  200 (385)
Q Consensus       123 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l  200 (385)
                      ..++.+++.+....+.+.+..+.+..++.++|||+|.+.+.+....  ....+.....++++++++++|++.+.||++.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~l  213 (370)
T d2iw1a1         134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRS  213 (370)
T ss_dssp             TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHH
T ss_pred             ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhh
Confidence            3578899999999988888877778899999999998765433222  11222222234578899999999999999999


Q ss_pred             HHHHHhC----CCceEEEEeCCccHHHHHHHHc----CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHh
Q 016648          201 KRVMDRL----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  272 (385)
Q Consensus       201 ~~a~~~~----~~~~l~i~G~g~~~~~l~~~~~----~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a  272 (385)
                      ++|++.+    ++..+.++|.+...+.++++++    ..++++.|+.  +++.++|+.||++++||..|++|++++|||+
T Consensus       214 i~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma  291 (370)
T d2iw1a1         214 IEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAIT  291 (370)
T ss_dssp             HHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHH
T ss_pred             cccccccccccccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccccccccceeeeccc
Confidence            9999887    3567777776655555555543    3368999977  7899999999999999999999999999999


Q ss_pred             cCCcEEEecCCCCCcccccCCCCCeeEee-CCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          273 SGIPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       273 ~G~PvI~s~~~~~~e~~~~~~~~~~g~~~-~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                      ||+|||+|+.++.+|++   .++.+|+++ +++|+++++++|.++++|++.+++|+++|++++++|++..+.+++.
T Consensus       292 ~G~PvI~s~~~g~~e~i---~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~  364 (370)
T d2iw1a1         292 AGLPVLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA  364 (370)
T ss_dssp             HTCCEEEETTSTTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred             CCeeEEEeCCCChHHHh---cCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhChhHHHHHHH
Confidence            99999999999999999   788898654 6789999999999999999999999999999997766655555554

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=9.1e-27  Score=212.35  Aligned_cols=275  Identities=16%  Similarity=0.092  Sum_probs=205.3

Q ss_pred             CEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcChhHHHHHHHhc-
Q 016648           65 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-  143 (385)
Q Consensus        65 DiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-  143 (385)
                      |+|++|++....++.++..+..+.++++++|..+|.........+     .......+..+|.|...+....+.+.... 
T Consensus       124 d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp~-----~~~il~~ll~~d~igf~~~~~~~~fl~~~~  198 (456)
T d1uqta_         124 DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPT-----YDTLLEQLCDYDLLGFQTENDRLAFLDCLS  198 (456)
T ss_dssp             CEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTT-----HHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred             CeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhccCcc-----hHHHHHHhhccccccccCHHHHHHHHHHHH
Confidence            999999998887777766666788999999998765322111111     11223345579999999988877765431 


Q ss_pred             ---c------------cCCCcEEEeeCCCCCCCCCCCCC--ChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHh
Q 016648          144 ---V------------TAANKIRIWKKGVDSESFHPRFR--SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  206 (385)
Q Consensus       144 ---~------------~~~~~i~vi~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~  206 (385)
                         +            ....++.++|+|+|.+.+.....  ......+......++++|+++||+++.||++.+++|+++
T Consensus       199 ~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~  278 (456)
T d1uqta_         199 NLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEA  278 (456)
T ss_dssp             HHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHH
T ss_pred             HHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHH
Confidence               0            01236778999999876643211  111112222224578899999999999999999999977


Q ss_pred             C----C----CceEEEEeCCcc---------HHHHHHHHc-------C----CCeEEecccChHHHHHHHHhCcEEEEcC
Q 016648          207 L----P----EARIAFIGDGPY---------REELEKMFT-------G----MPAVFTGMLLGEELSQAYASGDVFVMPS  258 (385)
Q Consensus       207 ~----~----~~~l~i~G~g~~---------~~~l~~~~~-------~----~~i~~~g~~~~~~~~~~~~~adi~v~ps  258 (385)
                      +    |    ++.++.+|.+..         ..++.+++.       .    ..+.+.+.++.+++..+|+.||++++||
T Consensus       279 ~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s  358 (456)
T d1uqta_         279 LLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTP  358 (456)
T ss_dssp             HHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECC
T ss_pred             HHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCC
Confidence            5    4    355666664431         122222221       1    2377899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHhcCCc-----EEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHH
Q 016648          259 ESETLGLVVLEAMSSGIP-----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQ  332 (385)
Q Consensus       259 ~~e~~~~~~~Ea~a~G~P-----vI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~  332 (385)
                      ..||+|++++|||+||+|     +|+|+.+|..+.+   .+   |++++|.|+++++++|.++++ ++++++++.+++++
T Consensus       359 ~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l---~~---g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~  432 (456)
T d1uqta_         359 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---TS---ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLD  432 (456)
T ss_dssp             SSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---TT---SEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             ccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh---CC---eEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            999999999999999999     8999999999988   33   789999999999999999998 56788899999999


Q ss_pred             HHHhCCHHHHHHHHHHHH
Q 016648          333 EMEKYDWRAATRTIRNEQ  350 (385)
Q Consensus       333 ~~~~~s~~~~~~~~~~~i  350 (385)
                      .+.+|++..+++.+++.+
T Consensus       433 ~v~~~~~~~W~~~fl~~l  450 (456)
T d1uqta_         433 VIVKNDINHWQECFISDL  450 (456)
T ss_dssp             HHHHTCHHHHHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHHHHH
Confidence            999999999999988543

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.94  E-value=6e-27  Score=190.28  Aligned_cols=179  Identities=25%  Similarity=0.364  Sum_probs=144.6

Q ss_pred             CCCCCCCCCCCCCh---hh--HhhhcCCCCCCcEEEEEeecc-ccccHHHHHHHHHhC------CCceEEEEeCCccH--
Q 016648          156 GVDSESFHPRFRSS---EM--RWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYR--  221 (385)
Q Consensus       156 ~v~~~~~~~~~~~~---~~--~~~~~~~~~~~~~i~~~G~~~-~~k~~~~l~~a~~~~------~~~~l~i~G~g~~~--  221 (385)
                      |||.+.|.+.....   +.  ..+.....+++++|+|+|++. ++||++.++++++.+      ++++++++|.|+..  
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~   80 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELE   80 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHH
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchh
Confidence            68888887653221   11  111223456788899999996 589999999999765      57899999987532  


Q ss_pred             HHHHHHHcC--CCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeE
Q 016648          222 EELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY  299 (385)
Q Consensus       222 ~~l~~~~~~--~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~  299 (385)
                      ...+.+...  ..+.+.|.++.+++..+|+.||++|+||..|++|.+++|||+||+|||+++.++..+++   .+ .+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i---~~-~~g~  156 (196)
T d2bfwa1          81 GWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII---TN-ETGI  156 (196)
T ss_dssp             HHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC---CT-TTCE
T ss_pred             hhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCccceee---cC-Ccee
Confidence            223332222  24678899999999999999999999999999999999999999999999999999988   44 5899


Q ss_pred             eeCCCCHHHHHHHHhHhhc-CHHHHHHHHHHHHHHHHhCC
Q 016648          300 LFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  338 (385)
Q Consensus       300 ~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~a~~~~~~~s  338 (385)
                      +++++|+++++++|.++++ +++.+++++++|++.+++||
T Consensus       157 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs  196 (196)
T d2bfwa1         157 LVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  196 (196)
T ss_dssp             EECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             eECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999887 78899999999999988786

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=3.4e-26  Score=180.45  Aligned_cols=136  Identities=25%  Similarity=0.436  Sum_probs=120.1

Q ss_pred             cEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCcc---HHHHHHHH---cCCCeEEecccChHHHHHHHHhCcEEEE
Q 016648          183 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPY---REELEKMF---TGMPAVFTGMLLGEELSQAYASGDVFVM  256 (385)
Q Consensus       183 ~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~---~~~l~~~~---~~~~i~~~g~~~~~~~~~~~~~adi~v~  256 (385)
                      ..++|+|++.+.||++.+++|++++++.+++++|.+..   .+.+.+..   ...+|+++|+++.+++..+|+.||++|+
T Consensus        13 ~~~l~iGrl~~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~   92 (166)
T d2f9fa1          13 DFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC   92 (166)
T ss_dssp             SCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEecCccccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccc
Confidence            45789999999999999999999999999999996543   33333222   2358999999999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHH
Q 016648          257 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  322 (385)
Q Consensus       257 ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~  322 (385)
                      ||..|++|.+++|||++|+|||+++.++..+++   .++.+|++++. |+++++++|.++++|++.
T Consensus        93 ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i---~~~~~g~~~~~-d~~~~~~~i~~l~~~~~~  154 (166)
T d2f9fa1          93 TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPDK  154 (166)
T ss_dssp             CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEECS-CHHHHHHHHHHHHHCTTT
T ss_pred             ccccccccccccccccccccceeecCCcceeee---cCCcccccCCC-CHHHHHHHHHHHHhCHHH
Confidence            999999999999999999999999999999999   88899998765 899999999999998753

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.33  E-value=5.1e-11  Score=104.63  Aligned_cols=286  Identities=16%  Similarity=0.132  Sum_probs=180.5

Q ss_pred             chHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEec-CCCcccccccccccchhHHHHHHHHHHhCCeEE
Q 016648           51 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT-HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  129 (385)
Q Consensus        51 ~~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  129 (385)
                      ...++.+++.+.+||+|++++-....+++...+...++|++- +|+ ........   +   ..-......+-+.+|..+
T Consensus        76 ~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~---~---~~de~~R~~iskls~~hf  148 (373)
T d1v4va_          76 ILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE---P---FPEEANRRLTDVLTDLDF  148 (373)
T ss_dssp             HHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS---S---TTHHHHHHHHHHHCSEEE
T ss_pred             HHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhhhee-eccccccccccc---C---cchhhhhhhhccccceee
Confidence            455788889999999999998877777777788899999874 333 11111000   0   011223445667899999


Q ss_pred             EcChhHHHHHHHhcccCCCcEEEeeCCC-CCCCCCCCCCChhhHhhhcCCCCCCcEEEEEeeccccccHHHHHHHHHhC-
Q 016648          130 VPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  207 (385)
Q Consensus       130 ~~s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~a~~~~-  207 (385)
                      +.++..++.+.+.+. ++.++.++.+.. |.  +.   .............++.+.++..-+....+....+.+++..+ 
T Consensus       149 ~~t~~~~~~L~~~Ge-~~~~I~~vG~p~~D~--i~---~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~  222 (373)
T d1v4va_         149 APTPLAKANLLKEGK-REEGILVTGQTGVDA--VL---LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVA  222 (373)
T ss_dssp             ESSHHHHHHHHTTTC-CGGGEEECCCHHHHH--HH---HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHH
T ss_pred             ecchhhhhhhhhhcc-cccceeecccchhhH--HH---hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHh
Confidence            999999999999875 567888877642 11  00   00000000111233455666666665555555555554433 


Q ss_pred             ---CCceEEEEeCCcc--HHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEe-
Q 016648          208 ---PEARIAFIGDGPY--REELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-  280 (385)
Q Consensus       208 ---~~~~l~i~G~g~~--~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s-  280 (385)
                         .+..+++......  .....+... ..++.++..+++.++..+++.|++++--|     |..+.||.++|+|+|.- 
T Consensus       223 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~P~Inir  297 (373)
T d1v4va_         223 EAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPVVVLR  297 (373)
T ss_dssp             HHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCEEECS
T ss_pred             hhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc-----chhhhcchhhcCcEEEeC
Confidence               5666665443221  122222233 34799999999999999999999999555     77788999999999987 


Q ss_pred             cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH
Q 016648          281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYNAAIWFWR  359 (385)
Q Consensus       281 ~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~-~s~~~~~~~~~~~iy~~~~~~~~  359 (385)
                      +.+.-++-+   +.+.+- ++ ..|.+++.+++.+++++++.+..+..     ..+ |.-.+.++++.+ +..+-+    
T Consensus       298 ~~~eRqeg~---~~g~nv-lv-~~d~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~-~L~~~~----  362 (373)
T d1v4va_         298 NVTERPEGL---KAGILK-LA-GTDPEGVYRVVKGLLENPEELSRMRK-----AKNPYGDGKAGLMVAR-GVAWRL----  362 (373)
T ss_dssp             SSCSCHHHH---HHTSEE-EC-CSCHHHHHHHHHHHHTCHHHHHHHHH-----SCCSSCCSCHHHHHHH-HHHHHT----
T ss_pred             CCccCHHHH---hcCeeE-Ec-CCCHHHHHHHHHHHHcCHHHHhhccc-----CCCCCCCCHHHHHHHH-HHHHHh----
Confidence            456666656   455553 44 34899999999999999877655433     122 554455555553 222222    


Q ss_pred             HHhhccCCccchh
Q 016648          360 KKRAQLLRPIQWL  372 (385)
Q Consensus       360 ~~~~~~~~~~~~~  372 (385)
                         ....||..|+
T Consensus       363 ---~~~~~~~~~~  372 (373)
T d1v4va_         363 ---GLGPRPEDWL  372 (373)
T ss_dssp             ---TSSCCCCCCC
T ss_pred             ---CCCCCCCCCC
Confidence               3445566665

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.20  E-value=7.8e-10  Score=97.09  Aligned_cols=255  Identities=18%  Similarity=0.133  Sum_probs=154.5

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+++.+.+||+|++++.....+++...+...++|++- +|+-....  ...   ....-......+-+.+|..++.
T Consensus        77 i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~--~~~---~~~~de~~R~~iskls~~hf~~  150 (377)
T d1o6ca_          77 LVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTG--NKY---SPFPEELNRQMTGAIADLHFAP  150 (377)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCS--CTT---TTTTHHHHHHHHHHHCSEEEES
T ss_pred             HHhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEE-Eecccccc--ccc---ccCchhhhccccccceeEEeec
Confidence            45678888999999999998877778888889999999863 34421111  000   0011122344566889999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCC-CCCCC-CCCCCChhhHhhhcCCCCCCcEEEEEeecccc-----ccHHHHHHHH
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGV-DSESF-HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE-----KSLDFLKRVM  204 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~-----k~~~~l~~a~  204 (385)
                      ++..++.+.+.+. ++.+|.++.+.. |.-.. ........   .......+..+++..-+....     ..+..++.++
T Consensus       151 t~~~~~~L~~~G~-~~~~I~~vG~~~~D~i~~~~~~~~~~~---~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~  226 (377)
T d1o6ca_         151 TGQAKDNLLKENK-KADSIFVTGNTAIDALNTTVRDGYSHP---VLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIV  226 (377)
T ss_dssp             SHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHCCSSCCCS---TTTTTTTSEEEEECC----------HHHHHHHHHHH
T ss_pred             chhhhhhhhhhcc-ccceEeeccchhHHHHHHHHHHHHhhh---hhhhccCCceEEEEeccccccccchHHHHHHHHhhc
Confidence            9999999999875 567898888753 21100 00000000   011112234445544443222     1233455555


Q ss_pred             HhCCCceEEEEeCCcc--HHHHHH-HHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          205 DRLPEARIAFIGDGPY--REELEK-MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       205 ~~~~~~~l~i~G~g~~--~~~l~~-~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      ...++..+++......  ...+.+ .....++.+...+++.++..+++.|++++--|     |..+.||-.+|+|+|.-.
T Consensus       227 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----ss~i~Ea~~lg~P~Inir  301 (377)
T d1o6ca_         227 GEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----GGVQEEAPSLGKPVLVLR  301 (377)
T ss_dssp             HHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEEC
T ss_pred             ccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-----chhHHhhhhhhceEEEeC
Confidence            6656666655433221  122222 22334799999999999999999999999544     555889999999999764


Q ss_pred             C-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHHHH
Q 016648          282 A-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  326 (385)
Q Consensus       282 ~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~~~  326 (385)
                      . +.-++.+   +.|.+ .+++. |.+++.+++.++++++...+.+
T Consensus       302 ~~tERqe~~---~~g~n-ilv~~-~~~~I~~~i~~~l~~~~~~~~~  342 (377)
T d1o6ca_         302 DTTERPEGV---EAGTL-KLAGT-DEENIYQLAKQLLTDPDEYKKM  342 (377)
T ss_dssp             SCCC---CT---TTTSS-EEECS-CHHHHHHHHHHHHHCHHHHHHH
T ss_pred             CCCcCcchh---hcCee-EECCC-CHHHHHHHHHHHHhChHHHhhh
Confidence            3 3345555   45544 44544 8899999999999988766544

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.12  E-value=1.5e-09  Score=94.52  Aligned_cols=252  Identities=15%  Similarity=0.143  Sum_probs=146.6

Q ss_pred             HHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEcC
Q 016648           53 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  132 (385)
Q Consensus        53 ~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s  132 (385)
                      ....+++++.+||++.+..... .......++..++|++...++..+..               ..+.....++.+....
T Consensus        80 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~a~~~~ip~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  143 (351)
T d1f0ka_          80 RQARAIMKAYKPDVVLGMGGYV-SGPGGLAAWSLGIPVVLHEQNGIAGL---------------TNKWLAKIATKVMQAF  143 (351)
T ss_dssp             HHHHHHHHHHCCSEEEECSSTT-HHHHHHHHHHTTCCEEEEECSSSCCH---------------HHHHHTTTCSEEEESS
T ss_pred             HHHHHHhhccccceeeecccch-hhhhhhhhhhcccceeecccccccch---------------hHHHhhhhcceeeccc
Confidence            4566788899999999876533 33345567889999988766654321               2334455666665432


Q ss_pred             hhHHHHHHHhcccCCCcEEEeeCCCCCCCCCCCCCChhhHhhhcCCCCCCcEEEEEe-eccccccHHHHHHHHHhCCCce
Q 016648          133 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSLDFLKRVMDRLPEAR  211 (385)
Q Consensus       133 ~~~~~~~~~~~~~~~~~i~vi~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~k~~~~l~~a~~~~~~~~  211 (385)
                      ..           .......+.++.........  ..  ..+ .....++..++.+| ..+...-.+.+.+.+..+....
T Consensus       144 ~~-----------~~~~~~~~~~~~~~~~~~~~--~~--~~~-~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~~~  207 (351)
T d1f0ka_         144 PG-----------AFPNAEVVGNPVRTDVLALP--LP--QQR-LAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSV  207 (351)
T ss_dssp             TT-----------SSSSCEECCCCCCHHHHTSC--CH--HHH-HTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGGGE
T ss_pred             cc-----------cccceeEEcCCcccccccch--hH--Hhh-hhcccCCcccccccccchhhhhHHHHHHhhhhhcccc
Confidence            21           11223333333322211111  11  111 11233455555544 4443333455666666665433


Q ss_pred             EE-EEeCCcc-HHHHHHHH--cCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCC--
Q 016648          212 IA-FIGDGPY-REELEKMF--TGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI--  285 (385)
Q Consensus       212 l~-i~G~g~~-~~~l~~~~--~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~--  285 (385)
                      .. ..+.... ........  ...++.+.++.  +++.++|+.||++|.    .+.++++.|++++|+|+|+.+.+..  
T Consensus       208 ~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~--~~~~~lm~~adl~It----~~G~~T~~Eal~~g~P~I~iP~~~~~~  281 (351)
T d1f0ka_         208 TIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVC----RSGALTVSEIAAAGLPALFVPFQHKDR  281 (351)
T ss_dssp             EEEEECCTTCHHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEE----CCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred             eeeeeccccchhhhhhhhcccccccceeeeeh--hhHHHHHHhCchhhc----cccchHHHHHHHhCCceeeeecccCCc
Confidence            33 3333322 22222222  23478899998  789999999999994    3446899999999999998654321  


Q ss_pred             -----CcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 016648          286 -----PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  347 (385)
Q Consensus       286 -----~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  347 (385)
                           .+.+   ++.+.|..++..  +.+.+.+++..+  +++.+.+|++++++.......+.+++.+.
T Consensus       282 ~Q~~NA~~l---~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~i~  345 (351)
T d1f0ka_         282 QQYWNALPL---EKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVS  345 (351)
T ss_dssp             HHHHHHHHH---HHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             hHHHHHHHH---HHCCCEEEechhhCCHHHHHHHHHhh--CHHHHHHHHHHHHccCCccHHHHHHHHHH
Confidence                 2344   445567666533  478888888776  66777888888886644444555555554

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.97  E-value=1.1e-08  Score=89.42  Aligned_cols=256  Identities=16%  Similarity=0.147  Sum_probs=155.6

Q ss_pred             hHHHHHHhhccCCCEEEeCCCchhHHHHHHHHHHhCCCEEEEEecCCCcccccccccccchhHHHHHHHHHHhCCeEEEc
Q 016648           52 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  131 (385)
Q Consensus        52 ~~~l~~~i~~~~pDiI~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  131 (385)
                      ...+.+.+.+.+||+|++++-....+++...+...++|++- +|+-...  ....   ....-......+-+-+|..++.
T Consensus        75 i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s--~~~~---~~~pde~~R~~iskls~~hf~~  148 (376)
T d1f6da_          75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRT--GDLY---SPWPEEANRTLTGHLAMYHFSP  148 (376)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCC--SCTT---SSTTHHHHHHHHHHTCSEEEES
T ss_pred             HHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCceEEE-Eeccccc--cccc---ccCchhhhhhhhccceeEEEec
Confidence            45677888999999999998877778888888999999873 3441111  0000   0001122344556889999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeeCCC-CCCC-C-CCCCCChhh----Hhhhc-CCCCCCcEEEEEeec-cccccHHHHHH
Q 016648          132 SVAIGKDLEAARVTAANKIRIWKKGV-DSES-F-HPRFRSSEM----RWRLS-NGEPDKPLIVHVGRL-GVEKSLDFLKR  202 (385)
Q Consensus       132 s~~~~~~~~~~~~~~~~~i~vi~~~v-~~~~-~-~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~-~~~k~~~~l~~  202 (385)
                      ++..++.+.+.+. .+.++.++.+.. |.-. . .........    ..... .....+.+++..=+. ...+....+..
T Consensus       149 ~~~~~~~L~~~G~-~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~  227 (376)
T d1f6da_         149 TETSRQNLLRENV-ADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICH  227 (376)
T ss_dssp             SHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHH
T ss_pred             cHHHHhHHHhcCC-CccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHH
Confidence            9999999999886 567888887643 2100 0 000000000    01111 112233344433333 22344555555


Q ss_pred             HHHhC----CCceEEEEeCC-c-cHHHHHHHHc-CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCC
Q 016648          203 VMDRL----PEARIAFIGDG-P-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  275 (385)
Q Consensus       203 a~~~~----~~~~l~i~G~g-~-~~~~l~~~~~-~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~  275 (385)
                      ++..+    .++.+++.... . ......+... ..++.+...+++.++..+++.|++++--|     |.-+.||-.+|+
T Consensus       228 ~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ssgi~Ea~~lg~  302 (376)
T d1f6da_         228 ALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGK  302 (376)
T ss_dssp             HHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----SGGGGTGGGGTC
T ss_pred             HHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecC-----cchHhhHHHhCC
Confidence            55443    34555544322 1 1222333322 34799999999999999999999999555     566789999999


Q ss_pred             cEEEecC-CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcCHHHHH
Q 016648          276 PVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE  324 (385)
Q Consensus       276 PvI~s~~-~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~~~~~~  324 (385)
                      |+|.-.. +.-++.+   ..+ +..+++ .|.+++.+++.++++++....
T Consensus       303 P~Inir~~ter~~~~---~~g-~~i~v~-~~~~~I~~ai~~~l~~~~~~~  347 (376)
T d1f6da_         303 PVLVMRDTTERPEAV---TAG-TVRLVG-TDKQRIVEEVTRLLKDENEYQ  347 (376)
T ss_dssp             CEEECSSCCSCHHHH---HHT-SEEECC-SSHHHHHHHHHHHHHCHHHHH
T ss_pred             CEEEcCCCccCccce---ecC-eeEECC-CCHHHHHHHHHHHHhChHhhh
Confidence            9996422 2233444   333 334454 489999999999998875543

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.59  E-value=7.3e-08  Score=85.11  Aligned_cols=138  Identities=10%  Similarity=0.011  Sum_probs=88.4

Q ss_pred             CCcEEEEEeeccccc---cHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEc
Q 016648          181 DKPLIVHVGRLGVEK---SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  257 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k---~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~p  257 (385)
                      .+.+++..|......   -...+++++...+...++..|.....  ..  ....|+.+.+++|+.+   ++..+|++|  
T Consensus       237 ~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~v~~~~~~p~~~---ll~~~~~~I--  307 (401)
T d1rrva_         237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV--LP--DDRDDCFAIDEVNFQA---LFRRVAAVI--  307 (401)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC--CS--CCCTTEEEESSCCHHH---HGGGSSEEE--
T ss_pred             CCeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEeccccccc--cc--cCCCCEEEEeccCcHH---HhhhccEEE--
Confidence            345566666654332   23455566666665544444432210  00  1134899999997655   478899999  


Q ss_pred             CCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHH
Q 016648          258 SESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAAR  331 (385)
Q Consensus       258 s~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~  331 (385)
                        ..|..+++.||+++|+|+|+....+    ..+.+   ++.+.|...+..  ++++|+++|.++++ ++    ++++++
T Consensus       308 --~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v---~~~G~g~~l~~~~~~~~~L~~ai~~vl~-~~----~r~~a~  377 (401)
T d1rrva_         308 --HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTVLA-PE----TRARAE  377 (401)
T ss_dssp             --ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHHTS-HH----HHHHHH
T ss_pred             --ecCCchHHHHHHHhCCCEEEecccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhC-HH----HHHHHH
Confidence              5677899999999999999876654    33444   445678777665  58999999999994 44    334444


Q ss_pred             HHHHhC
Q 016648          332 QEMEKY  337 (385)
Q Consensus       332 ~~~~~~  337 (385)
                      +..+..
T Consensus       378 ~~~~~~  383 (401)
T d1rrva_         378 AVAGMV  383 (401)
T ss_dssp             HHTTTC
T ss_pred             HHHHHH
Confidence            444433

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.53  E-value=2.9e-07  Score=80.86  Aligned_cols=122  Identities=16%  Similarity=0.109  Sum_probs=78.6

Q ss_pred             HHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcE
Q 016648          198 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  277 (385)
Q Consensus       198 ~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv  277 (385)
                      ..+++++...+ ..+++.+.+....   ......++.+.+++++.+   ++..+|++|...    ..+++.|||++|+|+
T Consensus       241 ~~~~~~l~~~~-~~~~~~~~~~~~~---~~~~~~~v~i~~~~p~~~---ll~~a~~~v~hg----G~~t~~Eal~~G~P~  309 (391)
T d1pn3a_         241 KMAIKAVRASG-RRIVLSRGWADLV---LPDDGADCFVVGEVNLQE---LFGRVAAAIHHD----SAGTTLLAMRAGIPQ  309 (391)
T ss_dssp             HHHHHHHHHTT-CCEEEECTTTTCC---CSSCCTTCCEESSCCHHH---HHTTSSCEEEES----CHHHHHHHHHHTCCE
T ss_pred             HHHHHHHHhcC-CEEEEeccccccc---cccCCCCEEEecccCHHH---HHhhccEEEecC----chHHHHHHHHhCCcE
Confidence            44455666654 3444444222110   111234799999997554   588999999654    468999999999999


Q ss_pred             EEecCCCC--------CcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHhCC
Q 016648          278 VGVRAGGI--------PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  338 (385)
Q Consensus       278 I~s~~~~~--------~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~~~~s  338 (385)
                      |+.+..+-        .+.+   .+...|..++..  ++++++++|.+++++ +    +++++++..++..
T Consensus       310 v~~P~~~d~~~eQ~~nA~~l---~~~G~g~~l~~~~~~~~~l~~~i~~~l~~-~----~r~~a~~~a~~~~  372 (391)
T d1pn3a_         310 IVVRRVVDNVVEQAYHADRV---AELGVGVAVDGPVPTIDSLSAALDTALAP-E----IRARATTVADTIR  372 (391)
T ss_dssp             EEECSSCCBTTBCCHHHHHH---HHHTSEEEECCSSCCHHHHHHHHHHHTST-T----HHHHHHHHGGGSC
T ss_pred             EEeccccCCcchHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhCH-H----HHHHHHHHHHHHH
Confidence            99876532        3344   445577777655  489999999999965 3    3344555544443

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.39  E-value=4.7e-07  Score=79.62  Aligned_cols=138  Identities=12%  Similarity=0.047  Sum_probs=89.2

Q ss_pred             CcEEEEEeec-cccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCC
Q 016648          182 KPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  260 (385)
Q Consensus       182 ~~~i~~~G~~-~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~  260 (385)
                      ..+++..|.. ...+..+.++++++..+...+...|.....    ......|+++.+++++.   .+|..+|++|    .
T Consensus       239 ~~i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~----~~~~~~nv~~~~~~p~~---~~l~~~~~~V----~  307 (401)
T d1iira_         239 PPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLV----LPDDGADCFAIGEVNHQ---VLFGRVAAVI----H  307 (401)
T ss_dssp             CCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCC----CSSCGGGEEECSSCCHH---HHGGGSSEEE----E
T ss_pred             CeEEEccCccccchHHHHHHHHHHHHcCCeEEEeccCCccc----cccCCCCEEEEeccCHH---HHHhhcCEEE----e
Confidence            3445555544 334567788888888765444444432210    00112379999999755   4588899999    5


Q ss_pred             CCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHHHHHHH
Q 016648          261 ETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEM  334 (385)
Q Consensus       261 e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~a~~~~  334 (385)
                      .|..+++.||+++|+|+|+....+    ..+.+   ++.+.|..++..  ++++++++|.+++++ +    +.+++++..
T Consensus       308 hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l---~~~G~g~~l~~~~~~~~~l~~ai~~~l~~-~----~~~~a~~~~  379 (401)
T d1iira_         308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATALTP-E----THARATAVA  379 (401)
T ss_dssp             CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTSH-H----HHHHHHHHH
T ss_pred             cCCchHHHHHHHhCCCEEEccccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhCH-H----HHHHHHHHH
Confidence            677899999999999999976543    33344   444567776655  699999999999953 3    334455554


Q ss_pred             HhCC
Q 016648          335 EKYD  338 (385)
Q Consensus       335 ~~~s  338 (385)
                      +++.
T Consensus       380 ~~~~  383 (401)
T d1iira_         380 GTIR  383 (401)
T ss_dssp             HHSC
T ss_pred             HHHH
Confidence            4433

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=1.2e-05  Score=74.93  Aligned_cols=240  Identities=12%  Similarity=0.112  Sum_probs=150.8

Q ss_pred             CCCEEEeCCCchhH-HHHHHHH-------------HHhCCCEEEEEecCCCcccccccccccchhHHH------------
Q 016648           63 KPDIIHASSPGIMV-FGALIIA-------------KLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL------------  116 (385)
Q Consensus        63 ~pDiI~~~~~~~~~-~~~~~~~-------------~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~------------  116 (385)
                      +++++|++..++.. .+.++..             ...+..+++|.|...|.....+......+.+..            
T Consensus       299 ~~~vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l~~~~~~i~~i~~~f  378 (796)
T d1l5wa_         299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF  378 (796)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             chhhhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHHhHHHHHHHhHhhHHH
Confidence            47899998764332 2222111             113567899999988876655443332221110            


Q ss_pred             ---------------------------HHHHHHHhCCeEEEcChhHHHHHHHhcc-----cCCCcEEEeeCCCCCCCCCC
Q 016648          117 ---------------------------VIKFLHRAADLTLVPSVAIGKDLEAARV-----TAANKIRIWKKGVDSESFHP  164 (385)
Q Consensus       117 ---------------------------~~~~~~~~ad~ii~~s~~~~~~~~~~~~-----~~~~~i~vi~~~v~~~~~~~  164 (385)
                                                 +....+..+..+-.+|.-..+..++...     .-+.++.-|.|||....+-.
T Consensus       379 l~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~  458 (796)
T d1l5wa_         379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIK  458 (796)
T ss_dssp             HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTT
T ss_pred             HHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHh
Confidence                                       1134456678889999988887665431     23458999999997654421


Q ss_pred             CC--------------------C----------Ch----hhH---------------hhhc-CCCCCCcEEEEEeecccc
Q 016648          165 RF--------------------R----------SS----EMR---------------WRLS-NGEPDKPLIVHVGRLGVE  194 (385)
Q Consensus       165 ~~--------------------~----------~~----~~~---------------~~~~-~~~~~~~~i~~~G~~~~~  194 (385)
                      ..                    .          ..    ...               .+.. ...++..+++++-|+...
T Consensus       459 ~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~Y  538 (796)
T d1l5wa_         459 QCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEY  538 (796)
T ss_dssp             TTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGG
T ss_pred             hhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhh
Confidence            10                    0          00    000               0001 124577889999999999


Q ss_pred             ccHHHHH-HH------HHhCC-----CceEEEEeCCc-c---HHHHH-------HHHcC-------CCeEEecccChHHH
Q 016648          195 KSLDFLK-RV------MDRLP-----EARIAFIGDGP-Y---REELE-------KMFTG-------MPAVFTGMLLGEEL  244 (385)
Q Consensus       195 k~~~~l~-~a------~~~~~-----~~~l~i~G~g~-~---~~~l~-------~~~~~-------~~i~~~g~~~~~~~  244 (385)
                      |...+++ ..      ++..+     .+.+++.|... .   -+.+-       +.+..       .+|.|+....-+-.
T Consensus       539 KR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA  618 (796)
T d1l5wa_         539 KRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAA  618 (796)
T ss_dssp             GTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHH
T ss_pred             hcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHH
Confidence            9977733 22      22222     46788888422 1   11221       11111       15888888877777


Q ss_pred             HHHHHhCcEEEEcCC--CCCCcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCC
Q 016648          245 SQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP  303 (385)
Q Consensus       245 ~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~  303 (385)
                      ..++..||+-+..++  .|+.|++-+-|+.-|.+.+++-.|...|..+. ..++||+.+..
T Consensus       619 ~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~-vg~eN~f~fG~  678 (796)
T d1l5wa_         619 EKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK-VGEENIFIFGH  678 (796)
T ss_dssp             HHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSC
T ss_pred             HHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHh-cCccceEEecC
Confidence            889999999998766  79999999999999999999999988887721 12778888853

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.32  E-value=1.6e-05  Score=74.19  Aligned_cols=183  Identities=11%  Similarity=0.084  Sum_probs=121.9

Q ss_pred             HHHHhCCeEEEcChhHHHHHHHhcc-----cCCCcEEEeeCCCCCCCCCCCCC---------------------------
Q 016648          120 FLHRAADLTLVPSVAIGKDLEAARV-----TAANKIRIWKKGVDSESFHPRFR---------------------------  167 (385)
Q Consensus       120 ~~~~~ad~ii~~s~~~~~~~~~~~~-----~~~~~i~vi~~~v~~~~~~~~~~---------------------------  167 (385)
                      ..+..+..+-.+|.-..+.+++...     ..+.++.-+.|||....+-....                           
T Consensus       433 Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~  512 (824)
T d2gj4a1         433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLS  512 (824)
T ss_dssp             HHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGG
T ss_pred             HHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHH
Confidence            3456677778888888777776532     23468999999998877632100                           


Q ss_pred             ---Chh----h-------H--------hhh-cCCCCCCcEEEEEeeccccccHHHHH-------HHHHhC-----CCceE
Q 016648          168 ---SSE----M-------R--------WRL-SNGEPDKPLIVHVGRLGVEKSLDFLK-------RVMDRL-----PEARI  212 (385)
Q Consensus       168 ---~~~----~-------~--------~~~-~~~~~~~~~i~~~G~~~~~k~~~~l~-------~a~~~~-----~~~~l  212 (385)
                         ...    .       .        .+. ....++...++++-|+...|...+.+       +-+++.     ....+
T Consensus       513 ~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~  592 (824)
T d2gj4a1         513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTV  592 (824)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEE
T ss_pred             hCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEE
Confidence               000    0       0        000 11345778899999999999977622       222333     24678


Q ss_pred             EEEeCCc-c---HHHH-H------HHHcC-------CCeEEecccChHHHHHHHHhCcEEEEcCC--CCCCcHHHHHHHh
Q 016648          213 AFIGDGP-Y---REEL-E------KMFTG-------MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMS  272 (385)
Q Consensus       213 ~i~G~g~-~---~~~l-~------~~~~~-------~~i~~~g~~~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a  272 (385)
                      ++.|+.. .   .+.+ +      +.+..       .+|.|+....-.-...++..||+-+..++  .|+.|++=+-++.
T Consensus       593 IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~al  672 (824)
T d2gj4a1         593 MIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFML  672 (824)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHH
T ss_pred             EEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHH
Confidence            8888421 1   1111 1      11121       15889888877788889999999998776  6999999999999


Q ss_pred             cCCcEEEecCCCCCcccccCCCCCeeEeeCC
Q 016648          273 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP  303 (385)
Q Consensus       273 ~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~  303 (385)
                      -|.+.+++-.|...|+.+. ..++||+.+..
T Consensus       673 NGal~lstlDGwnvEi~~~-vg~~N~~~fG~  702 (824)
T d2gj4a1         673 NGALTIGTMDGANVEMAEE-AGEENFFIFGM  702 (824)
T ss_dssp             TTCEEEECSCTTHHHHHHH-HCGGGSEECSC
T ss_pred             cCCeeeccccchHHHHHHh-cCcccEEEeCC
Confidence            9999999999998887721 12678888753

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=97.99  E-value=1.4e-05  Score=71.52  Aligned_cols=141  Identities=12%  Similarity=0.072  Sum_probs=90.0

Q ss_pred             EEEEEeeccc--cccHHHHHHHHHhCCCceEEEEeCCccH-------HHHHHHHcCCCeEEecccChHHHHHHH--HhCc
Q 016648          184 LIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGPYR-------EELEKMFTGMPAVFTGMLLGEELSQAY--ASGD  252 (385)
Q Consensus       184 ~i~~~G~~~~--~k~~~~l~~a~~~~~~~~l~i~G~g~~~-------~~l~~~~~~~~i~~~g~~~~~~~~~~~--~~ad  252 (385)
                      +++..|....  ......++++++.++.--+..++.....       +.... ....|+.+..++|+.++   +  .+++
T Consensus       291 v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~Nv~~~~~~Pq~~l---L~hp~~~  366 (473)
T d2pq6a1         291 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTN-EIADRGLIASWCPQDKV---LNHPSIG  366 (473)
T ss_dssp             EEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHH-HHTTTEEEESCCCHHHH---HTSTTEE
T ss_pred             eeeccCccccccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchh-hccCceEEeeeCCHHHH---hcCCcCc
Confidence            4444444432  2335677788888764444445422111       11111 12458999999988776   6  5778


Q ss_pred             EEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC-CHHHHHHHHhHhhcCHHHHHHHH
Q 016648          253 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG-DLDDCLSKLEPLLYNQELRETMG  327 (385)
Q Consensus       253 i~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~-~~~~l~~~i~~ll~~~~~~~~~~  327 (385)
                      ++|    ..|..+++.||+.+|+|.|+....+    ....+.  +..+.|...+.+ +.++++++|.++++|+.. ++++
T Consensus       367 ~fI----tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~--~~~G~G~~l~~~~t~~~l~~ai~~vl~d~~~-~~~r  439 (473)
T d2pq6a1         367 GFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDKG-KKMK  439 (473)
T ss_dssp             EEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHHH-HHHH
T ss_pred             EEE----ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHH--HHcCeEEeeCCCcCHHHHHHHHHHHHcCChH-HHHH
Confidence            888    5677889999999999999876532    222220  233567766643 799999999999999863 4566


Q ss_pred             HHHHHHHH
Q 016648          328 QAARQEME  335 (385)
Q Consensus       328 ~~a~~~~~  335 (385)
                      ++|++..+
T Consensus       440 ~~a~~l~~  447 (473)
T d2pq6a1         440 QKAMELKK  447 (473)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66666543

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=97.92  E-value=0.00021  Score=63.31  Aligned_cols=143  Identities=13%  Similarity=0.104  Sum_probs=88.0

Q ss_pred             CCcEEEEEeecccc--ccHHHHHHHHHhCCCceEEEEeCCccHHHHH---HHHcCCCeEEecccChHHHHHHHHhCcEEE
Q 016648          181 DKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGPYREELE---KMFTGMPAVFTGMLLGEELSQAYASGDVFV  255 (385)
Q Consensus       181 ~~~~i~~~G~~~~~--k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~---~~~~~~~i~~~g~~~~~~~~~~~~~adi~v  255 (385)
                      ...+.+..|.....  .-...++++++..+ .++++...+.....+.   ......|+.+..++++.++.. ...++++|
T Consensus       265 ~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq~~lL~-hp~~~~fI  342 (450)
T d2c1xa1         265 TSVVYISFGTVTTPPPAEVVALSEALEASR-VPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLA-HEAVGAFV  342 (450)
T ss_dssp             TCEEEEECCSSCCCCHHHHHHHHHHHHHHT-CCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHT-STTEEEEE
T ss_pred             cceeeecccccccCCHHHHHHHHHHHHhcC-CeEEEEECCCccccCChhhhhhccccccccccCChHhhhc-cCceeEEE
Confidence            34455555655332  22556677776653 4555544322221111   011134899999998876522 26678888


Q ss_pred             EcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCCC--CHHHHHHHHhHhhcCHHHHHHHHHH
Q 016648          256 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  329 (385)
Q Consensus       256 ~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~  329 (385)
                          ..|..+++.||+.+|+|+|+....+    ....+.  +..+.|...+.+  +.+++.++|.++++|+.. ++.+++
T Consensus       343 ----tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~--~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~y-~~~~~r  415 (450)
T d2c1xa1         343 ----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE--DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKG-KKLREN  415 (450)
T ss_dssp             ----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHH-HHHHHH
T ss_pred             ----ccCCccHHHHHHHcCCCEEecccccchHHHHHHHH--HHcCcEEEecCCCcCHHHHHHHHHHHhcCcHH-HHHHHH
Confidence                5677889999999999999876542    122220  234677766644  789999999999999753 444444


Q ss_pred             HHH
Q 016648          330 ARQ  332 (385)
Q Consensus       330 a~~  332 (385)
                      +.+
T Consensus       416 ~~~  418 (450)
T d2c1xa1         416 LRA  418 (450)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.0043  Score=52.53  Aligned_cols=96  Identities=14%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             CCcE-EEEEe-ecccccc--HHHHHHHHHhC--CCceEEEEeCCccHHHHHHHHcCC------C-eEEecccChHHHHHH
Q 016648          181 DKPL-IVHVG-RLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQA  247 (385)
Q Consensus       181 ~~~~-i~~~G-~~~~~k~--~~~l~~a~~~~--~~~~l~i~G~g~~~~~l~~~~~~~------~-i~~~g~~~~~~~~~~  247 (385)
                      ++.. ++..| +....|.  .+.+.++++.+  .+..++++|.+.+.+..+......      . +.+.|..+-.|+..+
T Consensus       179 ~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~l  258 (348)
T d1pswa_         179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL  258 (348)
T ss_dssp             SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred             CCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHH
Confidence            4444 44444 2233343  34444544444  467899999776666555544322      2 456778888999999


Q ss_pred             HHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEec
Q 016648          248 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  281 (385)
Q Consensus       248 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~  281 (385)
                      ++.||++|.+.     +..+--|.++|+|+|+--
T Consensus       259 i~~a~l~I~~D-----tg~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         259 IAACKAIVTND-----SGLMHVAAALNRPLVALY  287 (348)
T ss_dssp             HHTSSEEEEES-----SHHHHHHHHTTCCEEEEE
T ss_pred             HhcceeEeecC-----ccHHHHHHHcCCCEEEEE
Confidence            99999999776     344556999999999764

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=97.42  E-value=0.0008  Score=59.42  Aligned_cols=115  Identities=16%  Similarity=0.054  Sum_probs=72.8

Q ss_pred             HHHHHHHHHhCCCceEEEE-eCCc---cHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHh
Q 016648          197 LDFLKRVMDRLPEARIAFI-GDGP---YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  272 (385)
Q Consensus       197 ~~~l~~a~~~~~~~~l~i~-G~g~---~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a  272 (385)
                      +..++.+++... .++++. +...   .....+......|+.+..+.+..++. .+..+|++|    ..|..+++.||+.
T Consensus       293 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l-~~p~~~~fI----tHGG~gs~~eAl~  366 (461)
T d2acva1         293 IREIALGLKHSG-VRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVL-AHKAIGGFV----SHCGWNSILESMW  366 (461)
T ss_dssp             HHHHHHHHHHHT-CEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHH-HSTTEEEEE----ECCCHHHHHHHHH
T ss_pred             HHHHHHHHHhcC-ccEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHH-hcccCCEEE----ecCCccHHHHHHH
Confidence            455555655553 444443 3211   11112222334478888888766554 478899999    6677889999999


Q ss_pred             cCCcEEEecCCC----CCcc-cccCCCCCeeEeeCC--------CCHHHHHHHHhHhhcCH
Q 016648          273 SGIPVVGVRAGG----IPDI-IPEDQDGKIGYLFNP--------GDLDDCLSKLEPLLYNQ  320 (385)
Q Consensus       273 ~G~PvI~s~~~~----~~e~-~~~~~~~~~g~~~~~--------~~~~~l~~~i~~ll~~~  320 (385)
                      +|+|+|+....+    .... +   +..+.|+..+.        -+++++++++.++++++
T Consensus       367 ~GVP~l~~P~~~DQ~~nA~rlv---e~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d  424 (461)
T d2acva1         367 FGVPILTWPIYAEQQLNAFRLV---KEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD  424 (461)
T ss_dssp             TTCCEEECCCSTTHHHHHHHHH---HTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT
T ss_pred             cCCCEEeCCcccchHHHHHHHH---HHhCceEEeeccccccCCccCHHHHHHHHHHHhhCC
Confidence            999999876432    2222 3   33456766543        27899999999999753

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.14  E-value=0.014  Score=51.22  Aligned_cols=96  Identities=13%  Similarity=0.062  Sum_probs=64.7

Q ss_pred             CCCeEEecccChHHHHHHHHhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCC----CCcccccCCCCCeeEeeCC--
Q 016648          230 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--  303 (385)
Q Consensus       230 ~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~----~~e~~~~~~~~~~g~~~~~--  303 (385)
                      ..|+.+.+++|+.++.. ..+++++|    ..|..+++.||+.+|+|+|+...-+    ....+.  +.-+.|+....  
T Consensus       333 ~~nv~~~~w~Pq~~lL~-hp~~~~fV----tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~--e~lG~Gv~l~~~~  405 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLA-HPSTGGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS--EDIRAALRPRAGD  405 (471)
T ss_dssp             TTEEEEESCCCHHHHHH-STTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTTCCEECCCCCT
T ss_pred             CCCeeecccCCHHHHhc-CccCCEEE----ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHH--HHheeEEEEecCC
Confidence            45799999999887622 14677888    5677889999999999999876432    122220  22345654433  


Q ss_pred             ---CCHHHHHHHHhHhhcCHHHHHHHHHHHHHH
Q 016648          304 ---GDLDDCLSKLEPLLYNQELRETMGQAARQE  333 (385)
Q Consensus       304 ---~~~~~l~~~i~~ll~~~~~~~~~~~~a~~~  333 (385)
                         -+.+++.++|.++++|++ .+.++++|++.
T Consensus       406 ~~~~t~~~l~~ai~~vl~~~~-~~~~r~ra~~l  437 (471)
T d2vcha1         406 DGLVRREEVARVVKGLMEGEE-GKGVRNKMKEL  437 (471)
T ss_dssp             TSCCCHHHHHHHHHHHHTSTH-HHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHhCCcH-HHHHHHHHHHH
Confidence               278999999999999875 22344444443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=91.61  E-value=0.79  Score=33.08  Aligned_cols=124  Identities=10%  Similarity=0.027  Sum_probs=67.0

Q ss_pred             CCcEEEEEeeccccccHHHHHHHHHhCCCceEEEEeCCccHHHHHHHHcCCCeEEecccChHHHHHHHHhCcEEEEcCCC
Q 016648          181 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  260 (385)
Q Consensus       181 ~~~~i~~~G~~~~~k~~~~l~~a~~~~~~~~l~i~G~g~~~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~adi~v~ps~~  260 (385)
                      +...++.+|.-.-   -..+.+.+....--++.+++...  +..+++..+.+....   +.+++.+.+.++|+++..+..
T Consensus        23 ~~~~ilviGaG~~---g~~v~~~L~~~g~~~i~v~nRt~--~ka~~l~~~~~~~~~---~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          23 HDKTVLVVGAGEM---GKTVAKSLVDRGVRAVLVANRTY--ERAVELARDLGGEAV---RFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             TTCEEEEESCCHH---HHHHHHHHHHHCCSEEEEECSSH--HHHHHHHHHHTCEEC---CGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCeEEEECCCHH---HHHHHHHHHhcCCcEEEEEcCcH--HHHHHHHHhhhcccc---cchhHHHHhccCCEEEEecCC
Confidence            4556777775222   23444544443223577777543  334444444444443   448999999999999987653


Q ss_pred             C--CCcHHHHHHH-h---cCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhH
Q 016648          261 E--TLGLVVLEAM-S---SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP  315 (385)
Q Consensus       261 e--~~~~~~~Ea~-a---~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~  315 (385)
                      .  -+.-..++.. .   .+.|.+.-|.+-.+++-+...+-.+-.++   |.++|.+...+
T Consensus        95 ~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~~~v~l~---~ld~l~~~~~~  152 (159)
T d1gpja2          95 PHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVR---TIDDLRVIARE  152 (159)
T ss_dssp             SSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGSTTEEEE---EHHHHHHHHHH
T ss_pred             CCccccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhhccCCeEEE---eHHHHHHHHHH
Confidence            2  2344455433 2   47898888875333221111222223343   66776665544

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=90.21  E-value=1.6  Score=30.39  Aligned_cols=109  Identities=22%  Similarity=0.178  Sum_probs=66.2

Q ss_pred             ceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCCC-CCCcHHHHHHHh-----cCCcEEE-
Q 016648          210 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSES-ETLGLVVLEAMS-----SGIPVVG-  279 (385)
Q Consensus       210 ~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~~-e~~~~~~~Ea~a-----~G~PvI~-  279 (385)
                      .+++|+-+.+. .+.+.......+..+...-+.++..+.+..  .|++++-... +.-|..+++.+.     ..+|||. 
T Consensus         2 arILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~~~~~~~~piI~l   81 (139)
T d1w25a1           2 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLI   81 (139)
T ss_dssp             CEEEEECSSTTHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEEccchhhhhhhhcccceeeeeeccccCCCchHHHHHhhhcccccCCCEEEE
Confidence            35666665443 444555555555555555455666666655  6777765432 334565666553     3578875 


Q ss_pred             ecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          280 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       280 s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      |..+.........+.|..+++..|-+.+++...|..++.
T Consensus        82 t~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr  120 (139)
T d1w25a1          82 TALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR  120 (139)
T ss_dssp             ECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             EcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence            444443332211166889999999999999999987753

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=89.55  E-value=1.9  Score=29.23  Aligned_cols=110  Identities=15%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHhC--cEEEEcCC-CCCCcHHHHHHHh---cCCcEEE-e
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASG--DVFVMPSE-SETLGLVVLEAMS---SGIPVVG-V  280 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~a--di~v~ps~-~e~~~~~~~Ea~a---~G~PvI~-s  280 (385)
                      +.+++|+=+.+. ...+.......+......-+.++..+.+.+.  |++++-.. .+.-|..+++.+.   ..+|+|. |
T Consensus         3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dlvi~D~~mp~~~G~e~~~~lr~~~~~~~iI~lt   82 (123)
T d1dbwa_           3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT   82 (123)
T ss_dssp             CCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhhcCCcEEEEeccCccccchHHHHHHHhcCCCCeEEEEE
Confidence            566777775542 3445555554455555555557777777664  66665433 3445777776654   4678874 3


Q ss_pred             cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       281 ~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ..+.........+.|..+++.+|-+.+++.++++++++
T Consensus        83 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~e  120 (123)
T d1dbwa_          83 GHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASE  120 (123)
T ss_dssp             CTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred             eeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            34432222211166888999999999999999988764

>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=88.47  E-value=1.5  Score=36.03  Aligned_cols=83  Identities=6%  Similarity=-0.023  Sum_probs=59.0

Q ss_pred             HHHHHHHHhCcEEEEcC--CCCC-CcHHHHHHHhcCCcEEEecCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          242 EELSQAYASGDVFVMPS--ESET-LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       242 ~~~~~~~~~adi~v~ps--~~e~-~~~~~~Ea~a~G~PvI~s~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ++-.++++.....+..-  ...+ +.-++.+|+.+|+-.|....+.+.+.+   ..+.--.+-+..+.+++++.|..+-+
T Consensus       223 ~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~~i~~~f---~~~sfI~~~df~s~~el~~~i~~l~~  299 (349)
T d2nzwa1         223 KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDF---NPKSFVNVHDFKNFDEAIDYIKYLHT  299 (349)
T ss_dssp             SCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTS---CGGGSEEGGGSSSHHHHHHHHHHHHT
T ss_pred             hhHHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCCcHHHcC---CCccEEEhhhCCCHHHHHHHHHHHhc
Confidence            45667788888888763  3334 477999999999777766666777777   22211122245689999999999999


Q ss_pred             CHHHHHHHH
Q 016648          319 NQELRETMG  327 (385)
Q Consensus       319 ~~~~~~~~~  327 (385)
                      |++.+.++-
T Consensus       300 n~~~Y~~~~  308 (349)
T d2nzwa1         300 HKNAYLDML  308 (349)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            998876654

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.30  E-value=3.9  Score=27.52  Aligned_cols=110  Identities=17%  Similarity=0.188  Sum_probs=64.6

Q ss_pred             CceEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHhC--cEEEEcCC-CCCCcHHHHHHHh---cCCcEEEe-
Q 016648          209 EARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASG--DVFVMPSE-SETLGLVVLEAMS---SGIPVVGV-  280 (385)
Q Consensus       209 ~~~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~a--di~v~ps~-~e~~~~~~~Ea~a---~G~PvI~s-  280 (385)
                      |++++++=+.+. .+.+.......+......-+.++..+.+...  |++++-.. .+.-|..+++.+.   ..+|+|.. 
T Consensus         1 nirILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlillD~~mp~~~g~~~~~~lr~~~~~~piI~lt   80 (122)
T d1kgsa2           1 NVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLT   80 (122)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEcchHHHHHHHHhhCccccccccccccchhHHHHHHHHhcCCCCcEEEEc
Confidence            456666665443 2334444444444444444446655555554  66665433 3445666666654   45788754 


Q ss_pred             cCCCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhc
Q 016648          281 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       281 ~~~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      ..+.........+.|..+++.+|-+.+++...+..++.
T Consensus        81 ~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~  118 (122)
T d1kgsa2          81 ALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIR  118 (122)
T ss_dssp             SSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHHH
Confidence            33332222222266889999999999999999987753

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=84.34  E-value=4.7  Score=27.74  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=64.4

Q ss_pred             eEEEEeCCcc-HHHHHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHHh---cCCcEEE-ecC
Q 016648          211 RIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMS---SGIPVVG-VRA  282 (385)
Q Consensus       211 ~l~i~G~g~~-~~~l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~-s~~  282 (385)
                      +++|+-+.+. ...+.......+..+...-+.++....+..  -|++++-.. .+.-|..+++.+.   ..+|||. |..
T Consensus         2 kILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~eAl~~l~~~~~dlvilD~~mp~~~G~e~~~~lr~~~~~~piI~lT~~   81 (137)
T d1ny5a1           2 NVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGH   81 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHTCEEEEESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEET
T ss_pred             EEEEEecCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHhhccccccchHHHhhhhhhHHHHHHHHHHhCCCCCEEEEECC
Confidence            4455554432 233444444334444444455777766665  566665433 3445666665553   4588774 444


Q ss_pred             CCCCcccccCCCCCeeEeeCCCCHHHHHHHHhHhhcC
Q 016648          283 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       283 ~~~~e~~~~~~~~~~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      +.........+.|..+++..|-+.+++...+.+++..
T Consensus        82 ~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~~  118 (137)
T d1ny5a1          82 GTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEH  118 (137)
T ss_dssp             TCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence            4333222222778899999999999999999887653

>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein DctD, receiver domain
species: Sinorhizobium meliloti [TaxId: 382]

Probab=80.71  E-value=4  Score=28.30  Aligned_cols=96  Identities=13%  Similarity=0.205  Sum_probs=55.1

Q ss_pred             HHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHH---hcCCcEEE-ecCCCCCcccccCCCCC
Q 016648          224 LEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAM---SSGIPVVG-VRAGGIPDIIPEDQDGK  296 (385)
Q Consensus       224 l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~---a~G~PvI~-s~~~~~~e~~~~~~~~~  296 (385)
                      +.......+......-+.++....+..  .|++++-.. .+.-|..+++.+   ...+|||. |..+.....+...+.|-
T Consensus        16 l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlil~D~~mP~~~G~el~~~lr~~~~~~pvI~lT~~~~~~~~~~a~~~Ga   95 (140)
T d1qkka_          16 MQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGA   95 (140)
T ss_dssp             HHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEEeCChHHHHHHHhccCcchHHHhhccCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCC
Confidence            333333334444444444555555544  466665433 233455555444   44688874 33333322222226788


Q ss_pred             eeEeeCCCCHHHHHHHHhHhhcC
Q 016648          297 IGYLFNPGDLDDCLSKLEPLLYN  319 (385)
Q Consensus       297 ~g~~~~~~~~~~l~~~i~~ll~~  319 (385)
                      .+++..|-+.+++..++.++++.
T Consensus        96 ~dyl~KP~~~~~L~~~i~~~~~~  118 (140)
T d1qkka_          96 YDFIAKPFAADRLVQSARRAEEK  118 (140)
T ss_dssp             CEEEESSCCHHHHHHHHHHHHHH
T ss_pred             CEeecCCCCHHHHHHHHHHHHHH
Confidence            89999999999999999887643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.29  E-value=1.4  Score=30.56  Aligned_cols=75  Identities=11%  Similarity=0.095  Sum_probs=44.7

Q ss_pred             EEEEe-CCccHHHHHHHH-cCCCeEEecccChHHHHHHH--HhCcEEEEcCCCCCCcHHHHHHHhcCCcEEEecCCCCC
Q 016648          212 IAFIG-DGPYREELEKMF-TGMPAVFTGMLLGEELSQAY--ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  286 (385)
Q Consensus       212 l~i~G-~g~~~~~l~~~~-~~~~i~~~g~~~~~~~~~~~--~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~s~~~~~~  286 (385)
                      +.++| .|..-..+.+.+ ...++.+.+-++..+....+  ..+|++|--|..++....+-.+...|+|+|.-..|-..
T Consensus         2 I~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~   80 (135)
T d1yl7a1           2 VGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA   80 (135)
T ss_dssp             EEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccch
Confidence            44555 344333333322 23344444444332222222  47899998888888888888899999999976665443

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.15  E-value=6.4  Score=26.34  Aligned_cols=95  Identities=20%  Similarity=0.254  Sum_probs=56.7

Q ss_pred             HHHHHcCCCeEEecccChHHHHHHHHh--CcEEEEcCC-CCCCcHHHHHHH---hcCCcEEE-ecCCCCCcccccCCCCC
Q 016648          224 LEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAM---SSGIPVVG-VRAGGIPDIIPEDQDGK  296 (385)
Q Consensus       224 l~~~~~~~~i~~~g~~~~~~~~~~~~~--adi~v~ps~-~e~~~~~~~Ea~---a~G~PvI~-s~~~~~~e~~~~~~~~~  296 (385)
                      +.......+......-+.++..+.+..  .|++++-.. .+.-|..+++.+   ...+|+|. |..+.........+.|.
T Consensus        17 l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga   96 (121)
T d1ys7a2          17 LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGA   96 (121)
T ss_dssp             HHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTC
T ss_pred             HHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEEeeCCHHHHHHHHHCCC
Confidence            334443334444444444555555554  466666443 344466665555   45688774 44433333332226788


Q ss_pred             eeEeeCCCCHHHHHHHHhHhhc
Q 016648          297 IGYLFNPGDLDDCLSKLEPLLY  318 (385)
Q Consensus       297 ~g~~~~~~~~~~l~~~i~~ll~  318 (385)
                      .+++..|-+.++|.+.+.+++.
T Consensus        97 ~dyl~KP~~~~~L~~~i~~~l~  118 (121)
T d1ys7a2          97 DDYLVKPFVLAELVARVKALLR  118 (121)
T ss_dssp             SEEEESSCCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHHH
Confidence            9999999999999999988763