Citrus Sinensis ID: 016693

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEEEcccccEEccccccccEEEEEEEEccccccccccccHHHHHHcccccccccccccccccEEEEcccEEEcccEEEEccccccccccEEEEEEEEcccccccEEEEccccEEEEEcccccccccccccccccccHHcccccccHHHccHHccccccHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHccccccccEEEEEcccccccEEEEEccccEEEEEEEccEEEccccccHHHHHHHHHHHHHHHHcccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHcccccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEcccccccccccEEEcccccEEEEEEEccccEEEcccccccEEEEEEEEEccccccccccccHHHHHHccEccccccccEEEEEEEEEEEccEEEcccEEEEcccccccccEEEEEEEEEcccccEEEEEEEcccEEEEcccccccccccccccccHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEccEEEEEEEEEcccEEcHHHccHHHHHHHHHHHHHHHHcccccEEEEEEcc
Coil and Loop (DISEMBL)
msqkrqqedgkaraencpedkrrkghtFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKrnsekevhfpesrslQLQFLnnlslpvftgariegddsTIKVALVDTLtgqivtsgpessAKVEIVVLEgdfdgdesdnwtIEEFKNNIVreregkkplltgdaFLTLKegigsvgeisftdnsswtrsrrfrlgarvvdntdetrvreaktdsfivrdhrgelykkhhppvlfdEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLvldpsrlrhilgtgmSTKMWEVTVEHARTCVldkrvylycppgtqqksgvVFNVVGQVMGLLsecqyvpidklsetqkayfpyhIRSFVSCLLFSYIIFLLCL
Flexible Loop (DISEMBL)
msqkrqqedgkaraencpedkrrkghtfKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGqivtsgpessakvEIVVLEGdfdgdesdnwtieefknnivreregkkplltgDAFLTlkegigsvgeisftdnsswtrsrrfrlgarvvdntdetrvreaktdsfivrdhrgelykkhhppvlfdEVWRLEKIGKDGafhkrlsresintVKDFLtllvldpsrlRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Low Complexity Region (SEG)
MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRslqlqflnnlslPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Disordered region (IsUnstruct)
***************************FKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHL******************LQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGP*SSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLC*
Disordered Region (DISOPRED)
**********************************VMKIQSV*HFLEPVLEPLIRRVVKEEV****************************LQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIV*******PLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Disordered Region (DISEMBL)
****************CPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMK*************SLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Disordered Region (DISPRO)
**********************RKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLA*****SEKEV***ESRSLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSFVSCLLFSYIIFLLCL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
225457130	560	PREDICTED: uncharacterized protein LOC10	0.934	0.641	0.817	1e-172
297733835	392	unnamed protein product [Vitis vinifera]	0.934	0.915	0.817	1e-171
356513575	535	PREDICTED: uncharacterized protein LOC10	0.919	0.659	0.706	1e-142
224133440	424	predicted protein [Populus trichocarpa]	0.752	0.681	0.824	1e-136
356565035	507	PREDICTED: uncharacterized protein LOC10	0.841	0.637	0.736	1e-135
449477378	500	PREDICTED: uncharacterized LOC101211405	0.875	0.672	0.676	1e-129
449440702	595	PREDICTED: uncharacterized protein LOC10	0.875	0.564	0.676	1e-129
10178088	505	unnamed protein product [Arabidopsis tha	0.856	0.651	0.680	1e-129
334188577	494	calmodulin binding protein-like protein	0.856	0.665	0.680	1e-129
334188575	476	calmodulin binding protein-like protein	0.841	0.678	0.677	1e-127

>gi|225457130|ref|XP_002280322.1| PREDICTED: uncharacterized protein LOC100255354 [Vitis vinifera]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 296/362 (81%), Positives = 328/362 (90%), Gaps = 3/362 (0%)

Query: 1   MSQKRQQEDGKARAEN-CPEDKRRKGHTFKNVVQEVMKIQS-VQHFLEPVLEPLIRRVVK 58
           MSQKR  EDGKAR+E  CPEDK+RK  + KN + EVMK+QS VQH +EP+LEPLIR+VVK
Sbjct: 1   MSQKRHAEDGKARSEGGCPEDKKRKVPSLKNAILEVMKMQSSVQHLMEPILEPLIRKVVK 60

Query: 59  EEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDD-STIKVAL 117
           EEVE AL+KHL+NMKRN EKE+H  ESRSLQLQF N LSLPVFTG RIEG+D S+I+VAL
Sbjct: 61  EEVETALRKHLSNMKRNFEKELHPFESRSLQLQFSNALSLPVFTGTRIEGEDCSSIQVAL 120

Query: 118 VDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDA 177
           VD LTG++V SGPESSA+VEIVVLEGDFDGDE DNWT+EEFKNNIVREREGKKPLLTGDA
Sbjct: 121 VDGLTGEVVKSGPESSARVEIVVLEGDFDGDEGDNWTLEEFKNNIVREREGKKPLLTGDA 180

Query: 178 FLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGEL 237
           FL LK+G+G V EISFTDNSSWTRSR+FRLGARVVDN+D TR+REAKT+SFIVRDHRGEL
Sbjct: 181 FLNLKDGVGFVSEISFTDNSSWTRSRKFRLGARVVDNSDGTRIREAKTESFIVRDHRGEL 240

Query: 238 YKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMS 297
           YKKHHPP L DEVWRLEKIGKDGAFHKRLSRESI TVKDFLTLL LD  RLR+ILGTGMS
Sbjct: 241 YKKHHPPSLMDEVWRLEKIGKDGAFHKRLSRESITTVKDFLTLLYLDSPRLRNILGTGMS 300

Query: 298 TKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSET 357
           TKMWEVTVEHARTCV+DKR+++YCPPG QQKSGVVFN VGQ+MGLLSECQY+PIDKLSET
Sbjct: 301 TKMWEVTVEHARTCVIDKRIFMYCPPGPQQKSGVVFNTVGQLMGLLSECQYIPIDKLSET 360

Query: 358 QK 359
           +K
Sbjct: 361 EK 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297733835|emb|CBI15082.3| unnamed protein product [Vitis vinifera]

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/362 (81%), Positives = 328/362 (90%), Gaps = 3/362 (0%)

Query: 1   MSQKRQQEDGKARAEN-CPEDKRRKGHTFKNVVQEVMKIQS-VQHFLEPVLEPLIRRVVK 58
           MSQKR  EDGKAR+E  CPEDK+RK  + KN + EVMK+QS VQH +EP+LEPLIR+VVK
Sbjct: 1   MSQKRHAEDGKARSEGGCPEDKKRKVPSLKNAILEVMKMQSSVQHLMEPILEPLIRKVVK 60

Query: 59  EEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDD-STIKVAL 117
           EEVE AL+KHL+NMKRN EKE+H  ESRSLQLQF N LSLPVFTG RIEG+D S+I+VAL
Sbjct: 61  EEVETALRKHLSNMKRNFEKELHPFESRSLQLQFSNALSLPVFTGTRIEGEDCSSIQVAL 120

Query: 118 VDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDA 177
           VD LTG++V SGPESSA+VEIVVLEGDFDGDE DNWT+EEFKNNIVREREGKKPLLTGDA
Sbjct: 121 VDGLTGEVVKSGPESSARVEIVVLEGDFDGDEGDNWTLEEFKNNIVREREGKKPLLTGDA 180

Query: 178 FLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGEL 237
           FL LK+G+G V EISFTDNSSWTRSR+FRLGARVVDN+D TR+REAKT+SFIVRDHRGEL
Sbjct: 181 FLNLKDGVGFVSEISFTDNSSWTRSRKFRLGARVVDNSDGTRIREAKTESFIVRDHRGEL 240

Query: 238 YKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMS 297
           YKKHHPP L DEVWRLEKIGKDGAFHKRLSRESI TVKDFLTLL LD  RLR+ILGTGMS
Sbjct: 241 YKKHHPPSLMDEVWRLEKIGKDGAFHKRLSRESITTVKDFLTLLYLDSPRLRNILGTGMS 300

Query: 298 TKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSET 357
           TKMWEVTVEHARTCV+DKR+++YCPPG QQKSGVVFN VGQ+MGLLSECQY+PIDKLSET
Sbjct: 301 TKMWEVTVEHARTCVIDKRIFMYCPPGPQQKSGVVFNTVGQLMGLLSECQYIPIDKLSET 360

Query: 358 QK 359
           +K
Sbjct: 361 EK 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513575|ref|XP_003525488.1| PREDICTED: uncharacterized protein LOC100804548 [Glycine max]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/361 (70%), Positives = 302/361 (83%), Gaps = 8/361 (2%)

Query: 1   MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEE 60
           MS KR  +DGK      P+DKRRK   F +VV++VMK+Q++ H LEP+LEPL+R+VVKEE
Sbjct: 1   MSLKRPPDDGKT-----PDDKRRKPPPFSSVVRDVMKLQALGHLLEPILEPLVRKVVKEE 55

Query: 61  VELALKKHLANMKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDD-STIKVALVD 119
           VE ALK+HL +MK+   KE H  E R+LQLQF N++ LPVFTGARIEG+D S ++++LVD
Sbjct: 56  VEAALKRHLTSMKQTCGKEFHTTELRNLQLQFENSICLPVFTGARIEGEDGSNLRISLVD 115

Query: 120 TLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFL 179
            LTG++V++GPESSAKVEIVVLEGDF+ +ES+ W  EEFK+NIVREREGKKPLLTGD  L
Sbjct: 116 ALTGKVVSTGPESSAKVEIVVLEGDFE-EESETWMPEEFKSNIVREREGKKPLLTGDVIL 174

Query: 180 TLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYK 239
            LK+GIG VGEIS+TDNSSWTRSRRFRLGARVVDN D   +REAKT+SFIVRDHRGELYK
Sbjct: 175 YLKDGIGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVGIREAKTESFIVRDHRGELYK 234

Query: 240 KHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTK 299
           KHHPP L DEVWRLEKIGKDGAFHKRLSRE I TV++FLTLL LDP++LR ILGTGMS K
Sbjct: 235 KHHPPSLSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAK 294

Query: 300 MWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQK 359
           MWEVTVEHARTCVLD   ++Y P  +Q+  GVVFN VGQV GLLSEC+YV ++KL+ET+K
Sbjct: 295 MWEVTVEHARTCVLDTTRHVYFPSNSQEP-GVVFNAVGQVTGLLSECEYVTVEKLTETEK 353

Query: 360 A 360
           A
Sbjct: 354 A 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133440|ref|XP_002321568.1| predicted protein [Populus trichocarpa] gi|222868564|gb|EEF05695.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/290 (82%), Positives = 259/290 (89%), Gaps = 1/290 (0%)

Query: 72  MKRNSEKEVHFPESRSLQLQFLNNLSLPVFTGARIEGDDS-TIKVALVDTLTGQIVTSGP 130
           MKR+  K +   ESRSL+LQF NNLSLPVFTGARIEG++   IKV LVDT TG+IV SGP
Sbjct: 1   MKRSIGKGIDSSESRSLKLQFANNLSLPVFTGARIEGEEGPAIKVVLVDTRTGKIVNSGP 60

Query: 131 ESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGE 190
           ESS++VEIVVLEGDFDGDE++NWT EEFKNNIVREREGKKPLLTGD  L LKEGI  VGE
Sbjct: 61  ESSSRVEIVVLEGDFDGDEAENWTPEEFKNNIVREREGKKPLLTGDVLLNLKEGICLVGE 120

Query: 191 ISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEV 250
           ISFTDNSSWTRSR+FRLG R VDN D T +REAKT+SFIVRDHRGELYKKHHPP LFDEV
Sbjct: 121 ISFTDNSSWTRSRKFRLGVRAVDNFDGTSIREAKTESFIVRDHRGELYKKHHPPSLFDEV 180

Query: 251 WRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHART 310
           WRLEKIGKDGAFHKRLSRE+INTVKDFL LL +DP+RLRHILGTGMS KMWEVTVEHART
Sbjct: 181 WRLEKIGKDGAFHKRLSRENINTVKDFLILLFIDPTRLRHILGTGMSAKMWEVTVEHART 240

Query: 311 CVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKA 360
           CVLDK +YLYCPP +QQK+GVVFNVVGQVMGLLSE QYVPIDKLSET+KA
Sbjct: 241 CVLDKIIYLYCPPVSQQKTGVVFNVVGQVMGLLSEGQYVPIDKLSETEKA 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565035|ref|XP_003550750.1| PREDICTED: uncharacterized protein LOC100793156 [Glycine max]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/326 (73%), Positives = 278/326 (85%), Gaps = 3/326 (0%)

Query: 36  MKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNN 95
           MK+QS+ H LEP+LEPL+R+VVKEEVE ALK+HL +MK+   KE H  E R+LQLQF N+
Sbjct: 1   MKLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKEFHTTELRNLQLQFENS 60

Query: 96  LSLPVFTGARIEGDD-STIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWT 154
           + LPVFTGARIEG+D S +++ LVD LTG++V++GPESSAKVEIVVLEGDF+ +ES+ W 
Sbjct: 61  ICLPVFTGARIEGEDGSNLRIGLVDALTGKVVSTGPESSAKVEIVVLEGDFE-EESETWM 119

Query: 155 IEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDN 214
            EEFK+NIVREREGKKPLLTGD  L LK+GIG V EIS+TDNSSWTRSRRFRLGARVVDN
Sbjct: 120 PEEFKSNIVREREGKKPLLTGDVILYLKDGIGMVSEISYTDNSSWTRSRRFRLGARVVDN 179

Query: 215 TDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTV 274
            D  R+REAKT+SFIVRDHRGELYKKHHPP L DEVWRLEKIGKDGAFHKRLSRE I TV
Sbjct: 180 FDGVRIREAKTESFIVRDHRGELYKKHHPPGLSDEVWRLEKIGKDGAFHKRLSREKIVTV 239

Query: 275 KDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFN 334
           ++FLTLL LDP++LR ILGTGMS KMWEVTVEHARTCVLD   ++Y P  +Q+  GVVFN
Sbjct: 240 REFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQEP-GVVFN 298

Query: 335 VVGQVMGLLSECQYVPIDKLSETQKA 360
            VGQV GLLSEC YV +DKL+ET+KA
Sbjct: 299 AVGQVTGLLSECDYVTVDKLTETEKA 324

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477378|ref|XP_004155006.1| PREDICTED: uncharacterized LOC101211405 [Cucumis sativus]

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/346 (67%), Positives = 287/346 (82%), Gaps = 10/346 (2%)

Query: 18  PEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNS- 76
           P+DKRRK   F +VV++ + +QS+Q  LEPV    IR+VV+EEVELAL K++ N++RN  
Sbjct: 46  PDDKRRK-FCFMSVVRDAISLQSMQQLLEPV----IRKVVREEVELALGKYITNVQRNDG 100

Query: 77  --EKEVHFPESRSLQLQFLNNLSLPVFTGARIEG-DDSTIKVALVDTLTGQIVTSGPESS 133
              KE +    R  QL+F+ ++ LPVFTG+RIEG + S + VALVDTLTG++V +GP+SS
Sbjct: 101 NDAKENYSSGPRCFQLKFITDIFLPVFTGSRIEGRESSNLMVALVDTLTGEVVGAGPQSS 160

Query: 134 AKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISF 193
           AKVEIVVLEGDF+G   DN+T EEF+NNIVREREGKKPLLTG+  ++LK+GIGSVGEISF
Sbjct: 161 AKVEIVVLEGDFEGG-GDNYTAEEFRNNIVREREGKKPLLTGETLVSLKDGIGSVGEISF 219

Query: 194 TDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRL 253
           TDNSSWTRSRRFRLGAR++D+ D TR+ EAKT SF+VRDHRGELYKKHHPP L DEVWRL
Sbjct: 220 TDNSSWTRSRRFRLGARIIDDNDGTRILEAKTASFVVRDHRGELYKKHHPPTLQDEVWRL 279

Query: 254 EKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVL 313
           +KI KDGA+HKRLS+E I TVKDFLT L + PSRLR+ILG GMSTKMWE  +EHA+TCVL
Sbjct: 280 QKISKDGAYHKRLSQEKIETVKDFLTQLYVQPSRLRNILGHGMSTKMWEAIIEHAQTCVL 339

Query: 314 DKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQK 359
           DK++Y+Y P   +QKSGVVF+VVG+VMGLLS+ QYVPIDKLSE++K
Sbjct: 340 DKKIYVYKPHDLEQKSGVVFDVVGRVMGLLSDYQYVPIDKLSESEK 385

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440702|ref|XP_004138123.1| PREDICTED: uncharacterized protein LOC101211405 [Cucumis sativus]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/346 (67%), Positives = 287/346 (82%), Gaps = 10/346 (2%)

Query: 18  PEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNS- 76
           P+DKRRK   F +VV++ + +QS+Q  LEPV    IR+VV+EEVELAL K++ N++RN  
Sbjct: 46  PDDKRRK-FCFMSVVRDAISLQSMQQLLEPV----IRKVVREEVELALGKYITNVQRNDG 100

Query: 77  --EKEVHFPESRSLQLQFLNNLSLPVFTGARIEG-DDSTIKVALVDTLTGQIVTSGPESS 133
              KE +    R  QL+F+ ++ LPVFTG+RIEG + S + VALVDTLTG++V +GP+SS
Sbjct: 101 NDAKENYSSGPRCFQLKFITDIFLPVFTGSRIEGRESSNLMVALVDTLTGEVVGAGPQSS 160

Query: 134 AKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISF 193
           AKVEIVVLEGDF+G   DN+T EEF+NNIVREREGKKPLLTG+  ++LK+GIGSVGEISF
Sbjct: 161 AKVEIVVLEGDFEGG-GDNYTAEEFRNNIVREREGKKPLLTGETLVSLKDGIGSVGEISF 219

Query: 194 TDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRL 253
           TDNSSWTRSRRFRLGAR++D+ D TR+ EAKT SF+VRDHRGELYKKHHPP L DEVWRL
Sbjct: 220 TDNSSWTRSRRFRLGARIIDDNDGTRILEAKTASFVVRDHRGELYKKHHPPTLQDEVWRL 279

Query: 254 EKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVL 313
           +KI KDGA+HKRLS+E I TVKDFLT L + PSRLR+ILG GMSTKMWE  +EHA+TCVL
Sbjct: 280 QKISKDGAYHKRLSQEKIETVKDFLTQLYVQPSRLRNILGHGMSTKMWEAIIEHAQTCVL 339

Query: 314 DKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQK 359
           DK++Y+Y P   +QKSGVVF+VVG+VMGLLS+ QYVPIDKLSE++K
Sbjct: 340 DKKIYVYKPHDLEQKSGVVFDVVGRVMGLLSDYQYVPIDKLSESEK 385

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178088|dbj|BAB11507.1| unnamed protein product [Arabidopsis thaliana]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 226/332 (68%), Positives = 275/332 (82%), Gaps = 3/332 (0%)

Query: 30  NVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQ 89
           +VVQEVM++Q+V+HFLEPVLEPLIR+VVKEEVELAL KHLA +K   EKE H  ESR+LQ
Sbjct: 13  SVVQEVMRLQTVKHFLEPVLEPLIRKVVKEEVELALGKHLAGIKWICEKETHPLESRNLQ 72

Query: 90  LQFLNNLSLPVFTGARIEGDDS-TIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGD 148
           L+FLNNLSLPVFT ARIEGD+   I+V L+D  TGQI +SGP SSAK+E+ V+EGDF+  
Sbjct: 73  LKFLNNLSLPVFTSARIEGDEGQAIRVGLIDPSTGQIFSSGPASSAKLEVFVVEGDFNS- 131

Query: 149 ESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLG 208
              +WT E+ +NNIVREREGKKPLL G+ F  L +GIG + EISFTDNSSWTRSR+FRLG
Sbjct: 132 -VSDWTDEDIRNNIVREREGKKPLLNGNVFAVLNDGIGVMDEISFTDNSSWTRSRKFRLG 190

Query: 209 ARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSR 268
            R+VD  D  ++REA T+SF+VRDHRGELYKKHHPP LFDEVWRLEKIGKDGAFH+RL+ 
Sbjct: 191 VRIVDQFDYVKIREAITESFVVRDHRGELYKKHHPPSLFDEVWRLEKIGKDGAFHRRLNL 250

Query: 269 ESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQK 328
            +INTVKDFLT   L+ S+LR +LGTGMS+KMWE+T++HAR+CVLD  V++Y  PG Q+K
Sbjct: 251 SNINTVKDFLTHFHLNSSKLRQVLGTGMSSKMWEITLDHARSCVLDSSVHVYQAPGFQKK 310

Query: 329 SGVVFNVVGQVMGLLSECQYVPIDKLSETQKA 360
           + VVFNVV QV+GLL + QY+P +KLSE +KA
Sbjct: 311 TAVVFNVVAQVLGLLVDFQYIPAEKLSEIEKA 342

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188577|ref|NP_001190597.1| calmodulin binding protein-like protein [Arabidopsis thaliana] gi|225879154|dbj|BAH30647.1| hypothetical protein [Arabidopsis thaliana] gi|332010241|gb|AED97624.1| calmodulin binding protein-like protein [Arabidopsis thaliana]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 226/332 (68%), Positives = 275/332 (82%), Gaps = 3/332 (0%)

Query: 30  NVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQ 89
           +VVQEVM++Q+V+HFLEPVLEPLIR+VVKEEVELAL KHLA +K   EKE H  ESR+LQ
Sbjct: 13  SVVQEVMRLQTVKHFLEPVLEPLIRKVVKEEVELALGKHLAGIKWICEKETHPLESRNLQ 72

Query: 90  LQFLNNLSLPVFTGARIEGDDS-TIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGD 148
           L+FLNNLSLPVFT ARIEGD+   I+V L+D  TGQI +SGP SSAK+E+ V+EGDF+  
Sbjct: 73  LKFLNNLSLPVFTSARIEGDEGQAIRVGLIDPSTGQIFSSGPASSAKLEVFVVEGDFNS- 131

Query: 149 ESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLG 208
              +WT E+ +NNIVREREGKKPLL G+ F  L +GIG + EISFTDNSSWTRSR+FRLG
Sbjct: 132 -VSDWTDEDIRNNIVREREGKKPLLNGNVFAVLNDGIGVMDEISFTDNSSWTRSRKFRLG 190

Query: 209 ARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSR 268
            R+VD  D  ++REA T+SF+VRDHRGELYKKHHPP LFDEVWRLEKIGKDGAFH+RL+ 
Sbjct: 191 VRIVDQFDYVKIREAITESFVVRDHRGELYKKHHPPSLFDEVWRLEKIGKDGAFHRRLNL 250

Query: 269 ESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQK 328
            +INTVKDFLT   L+ S+LR +LGTGMS+KMWE+T++HAR+CVLD  V++Y  PG Q+K
Sbjct: 251 SNINTVKDFLTHFHLNSSKLRQVLGTGMSSKMWEITLDHARSCVLDSSVHVYQAPGFQKK 310

Query: 329 SGVVFNVVGQVMGLLSECQYVPIDKLSETQKA 360
           + VVFNVV QV+GLL + QY+P +KLSE +KA
Sbjct: 311 TAVVFNVVAQVLGLLVDFQYIPAEKLSEIEKA 342

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188575|ref|NP_201063.3| calmodulin binding protein-like protein [Arabidopsis thaliana] gi|332010240|gb|AED97623.1| calmodulin binding protein-like protein [Arabidopsis thaliana]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/326 (67%), Positives = 269/326 (82%), Gaps = 3/326 (0%)

Query: 36  MKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKEVHFPESRSLQLQFLNN 95
           M++Q+V+HFLEPVLEPLIR+VVKEEVELAL KHLA +K   EKE H  ESR+LQL+FLNN
Sbjct: 1   MRLQTVKHFLEPVLEPLIRKVVKEEVELALGKHLAGIKWICEKETHPLESRNLQLKFLNN 60

Query: 96  LSLPVFTGARIEGDDS-TIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWT 154
           LSLPVFT ARIEGD+   I+V L+D  TGQI +SGP SSAK+E+ V+EGDF+     +WT
Sbjct: 61  LSLPVFTSARIEGDEGQAIRVGLIDPSTGQIFSSGPASSAKLEVFVVEGDFNS--VSDWT 118

Query: 155 IEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDN 214
            E+ +NNIVREREGKKPLL G+ F  L +GIG + EISFTDNSSWTRSR+FRLG R+VD 
Sbjct: 119 DEDIRNNIVREREGKKPLLNGNVFAVLNDGIGVMDEISFTDNSSWTRSRKFRLGVRIVDQ 178

Query: 215 TDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTV 274
            D  ++REA T+SF+VRDHRGELYKKHHPP LFDEVWRLEKIGKDGAFH+RL+  +INTV
Sbjct: 179 FDYVKIREAITESFVVRDHRGELYKKHHPPSLFDEVWRLEKIGKDGAFHRRLNLSNINTV 238

Query: 275 KDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFN 334
           KDFLT   L+ S+LR +LGTGMS+KMWE+T++HAR+CVLD  V++Y  PG Q+K+ VVFN
Sbjct: 239 KDFLTHFHLNSSKLRQVLGTGMSSKMWEITLDHARSCVLDSSVHVYQAPGFQKKTAVVFN 298

Query: 335 VVGQVMGLLSECQYVPIDKLSETQKA 360
           VV QV+GLL + QY+P +KLSE +KA
Sbjct: 299 VVAQVLGLLVDFQYIPAEKLSEIEKA 324

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
TAIR|locus:2117557	601	AT4G25800 [Arabidopsis thalian	0.908	0.580	0.522	5e-92
TAIR|locus:2174522	647	AT5G57580 [Arabidopsis thalian	0.921	0.547	0.493	5e-92
TAIR|locus:2054000	622	AT2G18750 [Arabidopsis thalian	0.921	0.569	0.502	2.5e-90
TAIR|locus:2061112	599	AT2G24300 [Arabidopsis thalian	0.919	0.589	0.466	9.1e-84
TAIR|locus:2126679	562	AT4G31000 [Arabidopsis thalian	0.885	0.604	0.464	3.2e-81
TAIR|locus:505006222	451	SARD1 "AT1G73805" [Arabidopsis	0.812	0.691	0.450	6.3e-69
TAIR|locus:2148548	563	CBP60G "Cam-binding protein 60	0.757	0.516	0.457	6.2e-62

TAIR|locus:2117557 AT4G25800 [Arabidopsis thaliana (taxid:3702)]

 Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
 Identities = 187/358 (52%), Positives = 247/358 (68%)

Query:    11 KARAENCPEDK-RRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKK-- 67
             K   E   +DK  RK     +V+ E +K+ S+Q      LEP++RRVV EEVE AL K  
Sbjct:     2 KRNFERNDDDKPERKRPALASVIVEALKVDSLQKLCSS-LEPILRRVVSEEVERALAKLV 60

Query:    68 --HLANMKRNSEKEVHFPESRXXXXXXXXXXXXPVFTGARIEGDD-STIKVALVDTLTGQ 124
                L      S K +  P+ R            P+FTG R+EG+  +TI V L+D  TG+
Sbjct:    61 PTRLTTSSVFSPKRIGGPDGRNLQLHFKSRLSLPLFTGGRVEGEQGATIHVVLIDANTGR 120

Query:   125 IVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEG 184
              VT GPE+S K+E+VVL GDF+ ++ ++WT EEF++++V+EREGK+PLLTGD F+ LKEG
Sbjct:   121 PVTVGPEASLKLEVVVLGGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLFVVLKEG 180

Query:   185 IGSVGEISFTDNSSWTRSRRFRLGARVVDN-TDETRVREAKTDSFIVRDHRGELYKKHHP 243
             +G++GEI FTDNSSW RSR+FRLG RV     D  R+REAKT++F V+DHRGELYKKH+P
Sbjct:   181 VGTLGEIVFTDNSSWIRSRKFRLGLRVPSGYCDGIRIREAKTEAFSVKDHRGELYKKHYP 240

Query:   244 PVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEV 303
             P L DEVWRLEKIGKDGAFHKRL+   I TV+ FL  LV D ++LR ILG+GMS KMW++
Sbjct:   241 PALNDEVWRLEKIGKDGAFHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNKMWDL 300

Query:   304 TVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAY 361
              VEHA+TCVL  ++Y+Y    ++   GVVFN + ++ GL++E QY+  D LSE+QK Y
Sbjct:   301 LVEHAKTCVLSGKLYIYYTEDSRSV-GVVFNNIYELSGLITEDQYLSADSLSESQKVY 357

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2174522 AT5G57580 [Arabidopsis thaliana (taxid:3702)]

 Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
 Identities = 181/367 (49%), Positives = 255/367 (69%)

Query:     1 MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEE 60
             M++ ++  DG    ++ PE KR     F +V+ E +K+ S+Q      LEP++RRVV EE
Sbjct:     9 MNRAKRNLDGND--DDQPERKRP---AFASVIVEALKVDSLQKLCSS-LEPILRRVVSEE 62

Query:    61 VELALKK----HLANMKRNSEKEVHFPESRXXXXXXXXXXXXPVFTGARIEGDD-STIKV 115
             +E AL K     L     +S K +  P+ R            P+FTG ++EG+  + I V
Sbjct:    63 LERALAKLGPARLTGSSGSSPKRIEGPDGRKLQLHFKSRLSLPLFTGGKVEGEQGAVIHV 122

Query:   116 ALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTG 175
              L+D  TG+ V  GPE+SAK+ IVVLEGDF+ ++ ++WT EEF++++V+ER GK+PLLTG
Sbjct:   123 VLIDANTGRAVVYGPEASAKLHIVVLEGDFNTEDDEDWTQEEFESHVVKERSGKRPLLTG 182

Query:   176 DAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNT-DETRVREAKTDSFIVRDHR 234
             + ++TLKEG+G++GE+ FTDNSSW RSR+FRLG RVV    D  R+REAKT++F+V+DHR
Sbjct:   183 EVYVTLKEGVGTLGELVFTDNSSWIRSRKFRLGLRVVSGCCDGMRIREAKTEAFVVKDHR 242

Query:   235 GELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGT 294
             GELYKKH+PP L D+VWRL+KIGKDGAFHK+L+ E INTV+DFL ++V D  +LR ILG+
Sbjct:   243 GELYKKHYPPALNDDVWRLDKIGKDGAFHKKLTAEGINTVEDFLRVMVKDSPKLRTILGS 302

Query:   295 GMSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKL 354
             GMS KMW+  VEHA+TCV   ++Y+Y    ++   GVVFN + ++ GL+S  QY   D L
Sbjct:   303 GMSNKMWDALVEHAKTCVQSSKLYIYYAEDSRNV-GVVFNNIYELSGLISGDQYFSADSL 361

Query:   355 SETQKAY 361
             +++QK Y
Sbjct:   362 TDSQKVY 368

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2054000 AT2G18750 [Arabidopsis thaliana (taxid:3702)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 184/366 (50%), Positives = 250/366 (68%)

Query:     1 MSQKRQ-QEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKE 59
             M +KR+ +ED   + +  PE KR       +V+ E +K+ S+Q      LEP++RRVV E
Sbjct:    12 MREKRKLEEDDNQQQQQQPERKRP---ALASVIVEALKMDSLQRLCSS-LEPILRRVVSE 67

Query:    60 EVELALKK-HLANM-KRNSEKEVHFPESRXXXXXXXXXXXXPVFTGARIEGDD-STIKVA 116
             EVE AL K   A + +R+S K +     R            P+FTG +IEG+  + I V 
Sbjct:    68 EVERALAKLGPARLSERSSPKRIEGIGGRNLQLQFRSRLSVPLFTGGKIEGEQGAAIHVV 127

Query:   117 LVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGD 176
             L+D  TG ++T GPE+SAK+++VVL+GDF+ ++ D W+ EEF+ ++V+ER+GK+PLLTGD
Sbjct:   128 LLDMTTGHVLTVGPEASAKLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGKRPLLTGD 187

Query:   177 AFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDE-TRVREAKTDSFIVRDHRG 235
               +TLKEG+G++GE+ FTDNSSW R R+FRLG RV     E  RVREAKT++F V+DHRG
Sbjct:   188 VQVTLKEGVGTLGELIFTDNSSWIRCRKFRLGLRVSSGYCEGMRVREAKTEAFTVKDHRG 247

Query:   236 ELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTG 295
             ELYKKH+PP L DEVWRLEKIGKDGAFHK+L++  I  VK+FL L+V D  +LR ILG+G
Sbjct:   248 ELYKKHYPPALDDEVWRLEKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTILGSG 307

Query:   296 MSTKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLS 355
             MS +MWE   EH++TCVL + +Y+Y P   +   GVVFN + +  GL+S  QY P D LS
Sbjct:   308 MSNRMWETLAEHSKTCVLSEMLYVYYP---EDSVGVVFNNIYEFSGLISGKQYYPADSLS 364

Query:   356 ETQKAY 361
             + QK Y
Sbjct:   365 DNQKGY 370

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2061112 AT2G24300 [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 169/362 (46%), Positives = 241/362 (66%)

Query:     4 KRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVEL 63
             KR  E  +   +  PE KR+K     +V+ E +K+ S+Q      LEPL RR+V EEVE 
Sbjct:     3 KRGYECSQEDTDKLPESKRQKVPALASVIVEAVKVDSLQRLCSS-LEPLFRRIVSEEVER 61

Query:    64 ALKKHLANMK---RNSE-KEVHFPESRXXXXXXXXXXXXPVFTGARIEGD-DSTIKVALV 118
             AL + L N K   R+ E K +     R             +FTG ++EG+  S I V L+
Sbjct:    62 ALSR-LGNAKLTSRSPEPKRIQDRNGRNLQLHFRTRMPPHLFTGGKVEGERGSAIHVVLI 120

Query:   119 DTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAF 178
             D  TG +V +G ES++K+ +VVLEGDF+ ++ ++WT E F++  V+EREGK+P+LTGD  
Sbjct:   121 DANTGNVVQTGEESASKLNVVVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQ 180

Query:   179 LTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNT-DETRVREAKTDSFIVRDHRGEL 237
             + LKEG+G++GE++FTDNSSW RSR+FRLG +      D   +REAKT+ F V+DHRGEL
Sbjct:   181 IVLKEGVGTLGELTFTDNSSWIRSRKFRLGVKPASGYGDSFCIREAKTEPFAVKDHRGEL 240

Query:   238 YKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMS 297
             YKKH+PP + DEVWRL++I KDG  HK+L + +I TV+DFL LLV DP +LR++LG+GMS
Sbjct:   241 YKKHYPPAVHDEVWRLDRIAKDGVLHKKLLKANIVTVEDFLRLLVKDPQKLRNLLGSGMS 300

Query:   298 TKMWEVTVEHARTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSET 357
              +MWE TVEHA+TCVL  ++Y++    T   +GVVFN + +  GL++  Q++ ++ L+  
Sbjct:   301 NRMWENTVEHAKTCVLGGKLYVFYTDQTHA-TGVVFNHIYEFRGLITNGQFLSLESLNHD 359

Query:   358 QK 359
             QK
Sbjct:   360 QK 361

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005516 "calmodulin binding" evidence=TAS;IPI

TAIR|locus:2126679 AT4G31000 [Arabidopsis thaliana (taxid:3702)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 163/351 (46%), Positives = 235/351 (66%)

Query:    14 AENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMK 73
             A+N PE KR+K     +V+ E +K+ S+Q      LEPL RR+V EEVE A+ + L N K
Sbjct:    17 ADNLPESKRQKLPALASVIVEAVKVDSLQRLCSS-LEPLFRRIVSEEVERAISR-LENSK 74

Query:    74 ---RNSE-KEVHFPESRXXXXXXXXXXXXPVFTGARIEGDD-STIKVALVDTLTGQIVTS 128
                R++E  ++   + R             +FTG ++EG+  S I V L+D  TG ++ +
Sbjct:    75 STSRSTEPNKIQGLDGRNLQLRFRTRMPPHLFTGGKVEGEQGSAIHVVLIDANTGNVIQT 134

Query:   129 GPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSV 188
             G ES  K+ IVVL+GDF+ ++  +WT E F++  V+EREGK+P+LTGD  + +KEG+G++
Sbjct:   135 GEESMTKLNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILTGDRHVIIKEGVGTL 194

Query:   189 GEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFD 248
             G+++FTDNSSW RSR+FRLG +         +REAKT+ F V+DHRGELYKKH+PPVL D
Sbjct:   195 GKLTFTDNSSWIRSRKFRLGVKPATGF---HIREAKTEPFAVKDHRGELYKKHYPPVLHD 251

Query:   249 EVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHA 308
             EVWRL+KI KDGA HK+L + +I TV+DFL +L+ DP +LR +LG+GMS +MW+ TVEHA
Sbjct:   252 EVWRLDKIAKDGALHKKLLKSNIVTVEDFLQILMKDPQKLRSLLGSGMSNRMWDNTVEHA 311

Query:   309 RTCVLDKRVYLYCPPGTQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQK 359
             +TCVL  ++Y Y    T Q + VVFN + +  GL++   ++  + L+  QK
Sbjct:   312 KTCVLGGKLYAYYTDQTHQ-TAVVFNHIYEFQGLIANGHFLSSESLNHDQK 361

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS

TAIR|locus:505006222 SARD1 "AT1G73805" [Arabidopsis thaliana (taxid:3702)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 147/326 (45%), Positives = 208/326 (63%)

Query:     1 MSQKRQQEDGKARAENCPEDKRRKG--HTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVK 58
             M+ KR  +D  +  EN  E KR K    +  + +  V      ++ L  VLEP+IR+VV+
Sbjct:     1 MAGKRLFQDLDSDQENKSE-KRIKSVLPSLASPISSVFGALISENTLRSVLEPVIRKVVR 59

Query:    59 EEVELALKKHLANMKRNSEKEVHFPESRXXXXXXXXXXX--XPVFTGARIEG-DDSTIKV 115
             +EVE  + K    + R+S   +  PE+               P+FTG++I   D++ +++
Sbjct:    60 QEVEYGISKRF-RLSRSSSFRIEAPEATTPTLKLIFRKNLMTPIFTGSKISDVDNNPLEI 118

Query:   116 ALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTG 175
              LVD     +  + P    K++IV L GDF     D WT +EF++NI++ER+GK+PLL G
Sbjct:   119 ILVDDSNKPVNLNRP---IKLDIVALHGDFPS--GDKWTSDEFESNIIKERDGKRPLLAG 173

Query:   176 DAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNTDETRVR--EAKTDSFIVRDH 233
             +  +T++ G+ ++GEI FTDNSSW RSR+FR+GA+V   +    V   EA T++ +VRDH
Sbjct:   174 EVSVTVRNGVATIGEIVFTDNSSWIRSRKFRIGAKVAKGSSGQGVVVCEAMTEAIVVRDH 233

Query:   234 RGELYKKHHPPVLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILG 293
             RGELYKKHHPP+L DEVWRLEKIGKDGAFHK+LS   INTV+DFL L V+D   LR ILG
Sbjct:   234 RGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSSRHINTVQDFLKLSVVDVDELRQILG 293

Query:   294 TGMSTKMWEVTVEHARTCVLDKRVYL 319
              GMS + WEVT++HAR C+L  ++Y+
Sbjct:   294 PGMSDRKWEVTLKHARECILGNKLYI 319

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2148548 CBP60G "Cam-binding protein 60-like G" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 139/304 (45%), Positives = 196/304 (64%)

Query:    22 RRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKKHLANMKRNSEKE-V 80
             R +  TFK VV++VM+ QS   F+   +E +IRR+V+EE++ +L+  L++   + E+   
Sbjct:    19 RARNLTFKKVVKKVMRDQSNNQFMIQ-MENMIRRIVREEIQRSLQPFLSSSCVSMERSRS 77

Query:    81 HFPESRXXXXXXXXXXX-XPVFTGARIEGDD-STIKVALVDTLTGQIVTSGPESSAKVEI 138
               P SR              +FTG++IE +D S + + LVD  T  +V++GP SS++VE+
Sbjct:    78 ETPSSRSRLKLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFSSSRVEL 137

Query:   139 VVLEGDFDGDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSV-GEISFTDNS 197
             V L  DF  +ES  WT+E F  NI+ +REGK+PLLTGD  + LK G+G + G+I+F+DNS
Sbjct:   138 VPLNADFT-EES--WTVEGFNRNILTQREGKRPLLTGDLTVMLKNGVGVITGDIAFSDNS 194

Query:   198 SWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIG 257
             SWTRSR+FRLGA++   T +  V EA++++F  RD RGE YKKHHPP   DEVWRLEKI 
Sbjct:   195 SWTRSRKFRLGAKL---TGDGAV-EARSEAFGCRDQRGESYKKHHPPCPSDEVWRLEKIA 250

Query:   258 KDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDK-R 316
             KDG    RL+   I TVKDF  L  ++ + L +I+G G+S K W   V HA  CVLD+  
Sbjct:   251 KDGVSATRLAERKILTVKDFRRLYTVNRNELHNIIGAGVSKKTWNTIVSHAMDCVLDETE 310

Query:   317 VYLY 320
              Y+Y
Sbjct:   311 CYIY 314


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      384       372   0.00087  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  245 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.84u 0.10s 31.94t   Elapsed:  00:00:02
  Total cpu time:  31.84u 0.10s 31.94t   Elapsed:  00:00:02
  Start:  Mon May 20 21:36:03 2013   End:  Mon May 20 21:36:05 2013

GO:0005634 "nucleus" evidence=ISM

GO:0005516 "calmodulin binding" evidence=ISS;IDA

GO:0002237 "response to molecule of bacterial origin" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA;IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0010112 "regulation of systemic acquired resistance" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0080142 "regulation of salicylic acid biosynthetic process" evidence=IGI

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	384
pfam07887	301	pfam07887, Calmodulin_bind, Calmodulin binding pro	1e-148

>gnl|CDD|219620 pfam07887, Calmodulin_bind, Calmodulin binding protein-like

 Score =  422 bits (1086), Expect = e-148
 Identities = 175/276 (63%), Positives = 214/276 (77%), Gaps = 5/276 (1%)

Query: 88  LQLQFLNNLSLPVFTGARIEGDDST-IKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFD 146
           L+L FLN LSLP+FTG++IE +D   IK+ALVD  TG   TSGP SSAK+E+VVL GDF+
Sbjct: 2   LKLVFLNKLSLPIFTGSKIEAEDGAPIKIALVDANTGV--TSGPLSSAKLEVVVLHGDFN 59

Query: 147 GDESDNWTIEEFKNNIVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFR 206
            ++ +NWT EEF  NIV+EREGK+PLLTGD  +TLK G+  +GEI FTDNSSWTRSR+FR
Sbjct: 60  SEDDENWTEEEFNKNIVKEREGKRPLLTGDVTVTLKNGVAVIGEIFFTDNSSWTRSRKFR 119

Query: 207 LGARVVDNT-DETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDGAFHKR 265
           LGARVVD + D  RVREA T+SF+V+DHRGELYKKHHPP L DEVWRLEKIGKDGAFHKR
Sbjct: 120 LGARVVDGSYDGVRVREAVTESFVVKDHRGELYKKHHPPSLEDEVWRLEKIGKDGAFHKR 179

Query: 266 LSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPGT 325
           L+   INTVKDFL LL  DP++LR ILG+GMS KMWE T+ HA+TCVL  + Y+Y P   
Sbjct: 180 LTASGINTVKDFLRLLHRDPNKLRQILGSGMSNKMWETTISHAKTCVLGDKCYIYRPASE 239

Query: 326 QQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAY 361
            +  G+ FN V +++G+  +  YVP + LSE Q+A 
Sbjct: 240 -KNVGLFFNSVYELVGVSFDGSYVPANNLSELQQAA 274

The members of this family are putative or actual calmodulin binding proteins expressed by various plant species. Some members , are known to be involved in the induction of plant defence responses. However, their precise function in this regards is as yet unknown. Length = 301

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
PF07887	299	Calmodulin_bind: Calmodulin binding protein-like;	100.0
TIGR02239	316	recomb_RAD51 DNA repair protein RAD51. This eukary	87.52
TIGR02238	313	recomb_DMC1 meiotic recombinase Dmc1. This model d	85.91
PLN03186	342	DNA repair protein RAD51 homolog; Provisional	85.61
PRK04301	317	radA DNA repair and recombination protein RadA; Va	82.69

>PF07887 Calmodulin_bind: Calmodulin binding protein-like; InterPro: IPR012416 The members of this family are putative or actual calmodulin binding proteins expressed by various plant species

Probab=100.00  E-value=2.3e-119  Score=873.91  Aligned_cols=290  Identities=60%  Similarity=1.008  Sum_probs=282.4

Q ss_pred             ceEEEEecCCCCCcccCCcccccC-CccEEEEEeCCCCceeccCCCCcceEEEEEeeCCCCCCCCCCCCHHHHhhccccc
Q 016693           87 SLQLQFLNNLSLPVFTGARIEGDD-STIKVALVDTLTGQIVTSGPESSAKVEIVVLEGDFDGDESDNWTIEEFKNNIVRE  165 (384)
Q Consensus        87 ~~~L~F~n~l~~pifT~~kI~a~~-~~I~V~L~D~~t~~~V~~Gplss~kieIvVLdGDF~~~~~e~WT~eEF~~~IV~~  165 (384)
                      ++||+|.|+|++|+|||++|+|+| +||+|+|+|++|+  |++||+||+|||||||||||+++++++||+|||++|||++
T Consensus         1 ~~~L~F~n~l~~pifT~~~i~a~~g~~i~V~l~d~~~~--v~~g~lss~kieIvvLdGdF~~~~~~~wT~eeF~~~iv~~   78 (299)
T PF07887_consen    1 NLQLRFLNKLSLPIFTGSKIEAEDGAPIKVALVDANTG--VTSGPLSSAKIEIVVLDGDFNDEDCEDWTEEEFNSHIVKE   78 (299)
T ss_pred             CeEEEecCCCCCCcccCCceEecCCCcEEEEEEECCCC--ccCCCCCCcEEEEEEEccccCCCccCCCCHHHHhhcEeec
Confidence            589999999999999999999999 9999999999888  9999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccEEEEeccceeeccceeeecCCccccccceEEEEEeecCC-CccceeeecccceEEeecCCcccccCCCC
Q 016693          166 REGKKPLLTGDAFLTLKEGIGSVGEISFTDNSSWTRSRRFRLGARVVDNT-DETRVREAKTDSFIVRDHRGELYKKHHPP  244 (384)
Q Consensus       166 R~Gk~pLL~Gdl~v~L~~Gva~l~di~FtDnSs~~rsrKFRLgaRvv~~~-~g~RI~EAvse~FvVkd~Rge~~kKh~pP  244 (384)
                      |+||+|||+|+++|+|+||+|+|+||+|||||||+|||||||||||++++ .|+|||||+||||+|||||||+|||||||
T Consensus        79 r~gk~pLL~G~~~v~L~~G~a~l~di~FtdnSs~~rsrKFRLgarv~~~~~~~~rI~Eavse~FvVkd~Rge~~kKh~pP  158 (299)
T PF07887_consen   79 REGKRPLLTGDLQVTLKNGVATLGDISFTDNSSWIRSRKFRLGARVVSGSCDGVRIREAVSEPFVVKDHRGELYKKHYPP  158 (299)
T ss_pred             CCCCCCCCCccEEEEecCCEEEccccEEecCcccccCCcEEEEEEEccCCCCCceeEEeeecCEEEEecccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999998 99999999999999999999999999999


Q ss_pred             CCCCcceeeeeecccchhcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhccccCCCcEEEEcCCC
Q 016693          245 VLFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDKRVYLYCPPG  324 (384)
Q Consensus       245 ~L~DeVwRLekIgKdG~~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCvl~~~~y~y~~~~  324 (384)
                      +|+|||||||||||||+|||+|+++||+||+|||+++++||++||+|||+|||++||++||+|||||++++++|+|+.+ 
T Consensus       159 ~L~DeVwRLe~Igk~G~~hk~L~~~~I~tV~dFl~l~~~d~~~Lr~ilg~~ms~k~We~~v~HA~tCvl~~~~y~y~~~-  237 (299)
T PF07887_consen  159 SLDDEVWRLEKIGKDGAFHKRLKKNGINTVEDFLKLLNKDPQKLREILGSGMSNKMWETTVEHAKTCVLGDKLYVYYDE-  237 (299)
T ss_pred             CCCCchhhhhhccccCHHHHHHHHcCCccHHHHHHHHhcCHHHHHHHHhcCCChhhHHHHHHHHHhcCCCCcEEEEEec-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999954 


Q ss_pred             CCcceEEEEeccceeeeeeeCCEEeeCCCCChhhhhhhhhhHHHH---Hhhh-hhHHhhh
Q 016693          325 TQQKSGVVFNVVGQVMGLLSECQYVPIDKLSETQKAYFPYHIRSF---VSCL-LFSYIIF  380 (384)
Q Consensus       325 ~~~~v~l~FN~i~~lvG~~~~g~y~s~~~L~~~qk~~v~~~~~~~---~~~~-~f~y~~~  380 (384)
                       ++|++|+|||||+||||+|+|||+|.|+||+.||++|+.|+++|   ++++ .||..|.
T Consensus       238 -~~nv~l~FN~i~~lvga~~~g~y~s~d~L~~~qK~~v~~Lv~~AY~n~~~l~e~d~~~~  296 (299)
T PF07887_consen  238 -EQNVGLFFNCIYELVGAIFGGQYVSLDNLSSAQKAYVDKLVKQAYENWDNLEEYDGKML  296 (299)
T ss_pred             -CCceEEEEcchhhEEeEEECCEEEehHHcCHHHHHHHHHHHHHHHHhhhhheecccchh
Confidence             88999999999999999999999999999999999999999999   5556 7777664

Some members (for example, Q8H6T7 from SWISSPROT), are known to be involved in the induction of plant defence responses []. However, their precise function in this regard is as yet unknown.

>TIGR02239 recomb_RAD51 DNA repair protein RAD51

Probab=87.52  E-value=0.49  Score=47.21  Aligned_cols=48  Identities=21%  Similarity=0.161  Sum_probs=42.5

Q ss_pred             hcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhccccCC
Q 016693          262 FHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLD  314 (384)
Q Consensus       262 ~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCvl~  314 (384)
                      --++|+++||.||+||+.   .+|..|.+++  |+|...++.+..||.+|...
T Consensus        13 ~~~~l~~~g~~t~~~~~~---~~~~~L~~i~--~ls~~~~~~~~~~~~~~~~~   60 (316)
T TIGR02239        13 DIKKLQEAGLHTVESVAY---APKKQLLEIK--GISEAKADKILAEAAKLVPM   60 (316)
T ss_pred             HHHHHHHcCCCcHHHHHh---CCHHHHHHHh--CCCHHHHHHHHHHHHHhccc
Confidence            348999999999999977   5899999998  78999999999999988653

This eukaryotic sequence family consists of RAD51, a protein involved in DNA homologous recombination and repair. It is similar in sequence the exclusively meiotic recombinase DMC1 (TIGR02238), to archaeal families RadA (TIGR02236) and RadB (TIGR02237), and to bacterial RecA (TIGR02012).

>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1

Probab=85.91  E-value=0.66  Score=46.36  Aligned_cols=48  Identities=23%  Similarity=0.178  Sum_probs=42.3

Q ss_pred             hcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhccccCC
Q 016693          262 FHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLD  314 (384)
Q Consensus       262 ~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCvl~  314 (384)
                      --++|+++||.||+||+.   .++..|.++.  |+|...++.+++.|+.+...
T Consensus        13 ~~~~L~~~g~~t~~~~~~---~~~~~L~~~~--gls~~~~~~i~~~~~~~~~~   60 (313)
T TIGR02238        13 DIKKLKSAGICTVNGVIM---TTRRALCKIK--GLSEAKVDKIKEAASKIINP   60 (313)
T ss_pred             HHHHHHHcCCCcHHHHHh---CCHHHHHHhc--CCCHHHHHHHHHHHHhhhcc
Confidence            448999999999999876   5889999997  89999999999999988654

This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.

>PLN03186 DNA repair protein RAD51 homolog; Provisional

Probab=85.61  E-value=0.7  Score=46.89  Aligned_cols=61  Identities=25%  Similarity=0.188  Sum_probs=47.3

Q ss_pred             ceeeeeecccchhcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhccccCCC
Q 016693          250 VWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVLDK  315 (384)
Q Consensus       250 VwRLekIgKdG~~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCvl~~  315 (384)
                      +-+|+.-|-.-.--++|+++||.||+|++.   .++..|.++.  |+|....+.+.+||.+|....
T Consensus        28 ~~~l~~~gi~~~~i~kL~~~g~~T~~~~~~---~~~~~L~~i~--~is~~~~~~~~~~~~~~~~~~   88 (342)
T PLN03186         28 IEQLQASGIAALDIKKLKDAGIHTVESLAY---APKKDLLQIK--GISEAKVEKILEAASKLVPLG   88 (342)
T ss_pred             HHHHHhCCCCHHHHHHHHHcCCCcHHHHHh---CCHHHHHHhc--CCCHHHHHHHHHHHHHhcccc
Confidence            444444233333449999999999999876   4788999998  789999999999998876543

>PRK04301 radA DNA repair and recombination protein RadA; Validated

Probab=82.69  E-value=0.68  Score=45.57  Aligned_cols=57  Identities=19%  Similarity=0.299  Sum_probs=45.4

Q ss_pred             cceeeeeecccchhcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhcccc
Q 016693          249 EVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCV  312 (384)
Q Consensus       249 eVwRLekIgKdG~~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCv  312 (384)
                      ++-.|..||+.  .-++|.++||+|++|++.   .+++.|.+++  |++.+.++.+.+-|+.+.
T Consensus         7 ~l~~l~gIg~~--~a~~L~~~Gi~t~~dl~~---~~~~~L~~~~--g~~~~~a~~l~~~a~~~~   63 (317)
T PRK04301          7 DLEDLPGVGPA--TAEKLREAGYDTVEAIAV---ASPKELSEAA--GIGESTAAKIIEAAREAA   63 (317)
T ss_pred             cHhhcCCCCHH--HHHHHHHcCCCCHHHHHc---CCHHHHHHhc--CCCHHHHHHHHHHHHHhh
Confidence            45556667754  459999999999999865   5999999998  678889998888887644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 48/386 (12%), Positives = 114/386 (29%), Gaps = 117/386 (30%)

Query: 1   MSQKRQQEDGKARAENCPEDKRRKGHTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEE 60
           MS  + ++   +       ++R + +   N  Q   K                  V + +
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLY---NDNQVFAK----------------YNVSRLQ 135

Query: 61  VELALKKHLANMKRNSEKEVH----FPESRSLQLQFLNNLSL------PVF--TGARIEG 108
             L L++ L  ++      +       ++  + L    +  +       +F         
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194

Query: 109 DDSTIKVALVDTLTGQIV---TSGPESSAKVEI----------------------VVLEG 143
            ++ ++  ++  L  QI    TS  + S+ +++                      +VL  
Sbjct: 195 PETVLE--MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-- 250

Query: 144 DFDGDESDNWTIEEFKNN--IVREREGKKPLLTGDAFLTLKEGIGSVGEISFTDNS-SWT 200
               +  +      F  +  I+        L T    +T      +   IS   +S + T
Sbjct: 251 L---NVQNAKAWNAFNLSCKIL--------LTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 201 RSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELYKKHHPPVLFDEVWRLEKIGKDG 260
                 L  + +D   +   RE  T +        E  +       +D  W+   +  D 
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG--LATWDN-WK--HVNCD- 353

Query: 261 AFHKRLSRESINTVKDFLTLLVLDPSRLRH------IL--GTGMSTK----MW------- 301
               +L+      ++  L   VL+P+  R       +      + T     +W       
Sbjct: 354 ----KLTT----IIESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403

Query: 302 --EVTVEHARTCVLDKR-----VYLY 320
              V  +  +  +++K+     + + 
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIP 429

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 47/384 (12%), Positives = 116/384 (30%), Gaps = 112/384 (29%)

Query: 26  HTFKNVVQEVMKIQSVQHFLEPVLEPLIRRVVKEEVELALKK----HLANMKRNSEKEVH 81
           + +K+++           F +  ++    + V++  +  L K    H+   K        
Sbjct: 16  YQYKDILS---------VFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD------- 59

Query: 82  FPESRSLQLQFLNNLSLPVFTGARIEGDDSTIKVALVDT-------LTGQIVTSGPESSA 134
              S +L+L          F     +  +  ++  + +        L   I T   + S 
Sbjct: 60  -AVSGTLRL----------FWTLLSKQ-EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM 107

Query: 135 KVEIVVLEGDFDGDESDNWTIEEF-KNNIVRER---EGKKPL--LTGDAFLTLKEGIGSV 188
              + + +   D   +DN   + F K N+ R +   + ++ L  L     + + +G+   
Sbjct: 108 MTRMYIEQ--RDRLYNDN---QVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLGS 161

Query: 189 GEISFTDNSSWTRSRRFRLGARVVDNTDETRVREAKTDSFIVRDHRGELY-----KKHHP 243
           G+       +W       +   V  +              +      +++       + P
Sbjct: 162 GK-------TW-------VALDVCLSYK------------VQCKMDFKIFWLNLKNCNSP 195

Query: 244 PVLFDEVWRL----EKIGKDGAFHKRLSRESINTVKDFL-----------TLLVLDPSRL 288
             + + + +L    +      + H    +  I++++  L            LLVL     
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL---- 251

Query: 289 RHILGTGMSTKMWEVTVEHARTCVL--DKRVYLYCPPGTQQKSGVVFNVVG----QVMGL 342
            ++     + K W       +  +    K+V  +    T     +  + +     +V  L
Sbjct: 252 -NV----QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 343 LSECQYVPIDKLSETQKAYFPYHI 366
           L +        L        P  +
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRL 330

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
1wcn_A	70	Transcription elongation protein NUSA; RNA-binding	92.82
2kz3_A	83	Putative uncharacterized protein RAD51L3; RAD51D,	89.86

>1wcn_A Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B

Probab=92.82  E-value=0.02  Score=44.37  Aligned_cols=62  Identities=23%  Similarity=0.331  Sum_probs=51.1

Q ss_pred             CCCcceeeeeecccchhcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhcc-ccCC
Q 016693          246 LFDEVWRLEKIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHART-CVLD  314 (384)
Q Consensus       246 L~DeVwRLekIgKdG~~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAkt-Cvl~  314 (384)
                      ..|++-.|++|+..-+  ++|.++||+||+|+..   .+++.|-.|.  |+|...=+.++.-|+. |-+.
T Consensus         5 ~~~~l~~L~Gi~~~~~--~kL~e~Gi~TvedlA~---~~~~eL~~i~--gise~kA~~ii~aAr~~~w~~   67 (70)
T 1wcn_A            5 PADDLLNLEGVDRDLA--FKLAARGVCTLEDLAE---QGIDDLADIE--GLTDEKAGALIMAARNICWFG   67 (70)
T ss_dssp             CCHHHHSSTTCCHHHH--HHHHTTTCCSHHHHHT---SCHHHHHTSS--SCCHHHHHHHHHHHHHHHTTC
T ss_pred             hhhHHHHcCCCCHHHH--HHHHHcCCCcHHHHHc---CCHHHHHHcc--CCCHHHHHHHHHHHHHccCcc
Confidence            4567778887777655  9999999999999754   5888899987  7899999999999998 6553

>2kz3_A Putative uncharacterized protein RAD51L3; RAD51D, homologous recombination, unknown function; NMR {Homo sapiens}

Probab=89.86  E-value=0.19  Score=40.29  Aligned_cols=39  Identities=23%  Similarity=0.235  Sum_probs=30.4

Q ss_pred             cccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHH
Q 016693          263 HKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVE  306 (384)
Q Consensus       263 hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~  306 (384)
                      -++|.+++|.||+||+.   .|+.+|.+++  |+|-+.=-.+..
T Consensus        17 ~~~L~~~~I~Tv~Dfl~---~d~~eL~~~~--~ls~~~v~~l~r   55 (83)
T 2kz3_A           17 IQLLRSHRIKTVVDLVS---ADLEEVAQKC--GLSYKALVALRR   55 (83)
T ss_dssp             HHHHHHTTCCCHHHHTT---SCHHHHHHHH--TCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCHHHHHh---CCHHHHHHHh--CCCHHHHHHHHH
Confidence            38899999999999975   8999999998  556554444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d1szpa1	64	DNA repair protein Rad51, N-terminal domain {Baker	91.25

>d1szpa1 a.60.4.1 (A:81-144) DNA repair protein Rad51, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.25  E-value=0.038  Score=40.51  Aligned_cols=52  Identities=19%  Similarity=0.176  Sum_probs=43.7

Q ss_pred             eecccchhcccccccCCccHHHHHHHhccChHHHHHHHccCCCchhHHHHHHhhccccC
Q 016693          255 KIGKDGAFHKRLSRESINTVKDFLTLLVLDPSRLRHILGTGMSTKMWEVTVEHARTCVL  313 (384)
Q Consensus       255 kIgKdG~~hk~L~~~~I~tV~dFL~l~~~d~~kLr~iLg~gms~k~W~~~v~HAktCvl  313 (384)
                      +||...+  ++|.++|++||++..   +..++.|-++=  |++.+.=+.+++-|+.++.
T Consensus        10 Gig~~~~--~kL~~aG~~Tve~ia---~~t~~~L~~i~--Gi~e~~a~KIi~~A~k~~~   61 (64)
T d1szpa1          10 GITMADV--KKLRESGLHTAEAVA---YAPRKDLLEIK--GISEAKADKLLNEAARLVP   61 (64)
T ss_dssp             TCCHHHH--HHHHTTSCCSHHHHH---HSCSHHHHTST--TCCHHHHHHHHHHHHHHSC
T ss_pred             CCCHHHH--HHHHHcCCCcHHHHH---hCCHHHHHHcC--CCCHHHHHHHHHHHHHHcC
Confidence            5666555  999999999999974   47788899885  8999999999999998764