Citrus Sinensis ID: 016770


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MLSDETVEETNGDSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKKAEIQPAQPQRPQDQSLVLMENSIETNRSTEAS
cccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEEEEEcccEEEHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHccEEcccccHHHHHHHHHHcccEEEEEEcccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHccccccccccccccccccccccccccccccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHEEEEHcccEEccHHHHHEEHHHcccHHHEEEEEEcccHHHHHHccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccc
mlsdetveetngdsfgkVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGgfcfllgarphdihYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIrwwnpesfaamhpegssrraswpyvedksyLLTWLFLVPLGAYTLWQVLYFLIVNVLRrqrlvrdpevmTSYRELSKKAQKANNIWWRLSgllgdqnrMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKkkaeiqpaqpqrpqdqslVLMENSIetnrsteas
mlsdetveetngdsfgkvkqrfkdrsqkvvqtkaimskkavqtkemLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKkaeiqpaqpqrpqdqslvlmensietnrsteas
MLSDETVEETNGDSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHllgvlgfggfcfllgARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKKAEIQPAQPQRPQDQSLVLMENSIETNRSTEAS
************************************************************HERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAM********ASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVIL*************************************
***********************************************************EHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVI**************************************
*************SFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAM**********WPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKK************DQSLVLMENSI*********
************DSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKKAEIQPAQPQ***********************
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLSDETVEETNGDSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKKAEIQPAQPQRPQDQSLVLMENSIETNRSTEAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query383 2.2.26 [Sep-21-2011]
O94673403 Uncharacterized membrane yes no 0.817 0.776 0.276 3e-28
P48236432 Uncharacterized membrane yes no 0.728 0.645 0.280 8e-22
>sp|O94673|YG75_SCHPO Uncharacterized membrane protein C776.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.05 PE=4 SV=2 Back     alignment and function desciption
 Score =  126 bits (317), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 170/333 (51%), Gaps = 20/333 (6%)

Query: 16  GKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHE--RFINKVTHLLG 73
           G++K     +  K+      ++ +  + KE L K   K  +Q    +  RF +K++  LG
Sbjct: 59  GQLKHGVSRQKNKLQPIHKQINYETDKLKERLGKSIDKFQEQWNSGKVVRFRDKLSFALG 118

Query: 74  VLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVD 133
           V        L+G  P  +H  Y +   +++PLR+  Y+ K + Y++ DFCY+ N + LV 
Sbjct: 119 VSTCILTALLVGMAPESMHLWYTIQLFVYLPLRYYTYQRKGYEYFIADFCYWGNILLLVY 178

Query: 134 LLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWW 193
           + ++P++ +LF++ +S + G LAW+++ WR SL+F+S+DKI S+ IH  P LV  TI   
Sbjct: 179 IWIFPESRRLFILSYSISYGTLAWSVVAWRNSLLFHSIDKITSLFIHFFPPLVLHTIVHL 238

Query: 194 NPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGA--YTLWQVLYFLIVNVLRRQR 251
             +S+          +  +P V  K   +  L  V + +  Y LWQ+ Y+  + V ++++
Sbjct: 239 TNKSYL---------KDRFPAVL-KVKKIDLLSSVEIASFFYALWQIWYYFFIQVGKQKQ 288

Query: 252 LVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVATMALTVPIF 311
           +       TS+  LSK   K      R    L    + F+++  Q ++++ TM L   ++
Sbjct: 289 IQEGRP--TSFTWLSKAYSKTK--LGRAVAKLPQNLQPFVFMIIQYLYSITTM-LPCSLW 343

Query: 312 LSYKLH-VIFQILKISAAIWNGGSFLLEVMPKQ 343
            + KL+   F  L    ++WNG S+ ++V  ++
Sbjct: 344 YNNKLYSTAFLALIFGWSVWNGASYYIDVFGRR 376





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P48236|YG3L_YEAST Uncharacterized membrane protein YGR149W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR149W PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
225444824408 PREDICTED: uncharacterized membrane prot 0.986 0.926 0.791 0.0
224141655384 predicted protein [Populus trichocarpa] 0.981 0.979 0.824 0.0
255546053391 conserved hypothetical protein [Ricinus 0.971 0.951 0.830 0.0
297801074379 hypothetical protein ARALYDRAFT_915673 [ 0.958 0.968 0.827 0.0
15238520381 uncharacterized protein [Arabidopsis tha 0.939 0.944 0.842 1e-180
449452540389 PREDICTED: uncharacterized membrane prot 0.979 0.964 0.784 1e-179
356565856363 PREDICTED: uncharacterized membrane prot 0.929 0.980 0.826 1e-177
363806932363 uncharacterized protein LOC100791853 [Gl 0.919 0.969 0.835 1e-176
224087959377 predicted protein [Populus trichocarpa] 0.960 0.976 0.781 1e-173
147766972368 hypothetical protein VITISV_009914 [Viti 0.882 0.918 0.711 1e-160
>gi|225444824|ref|XP_002280579.1| PREDICTED: uncharacterized membrane protein C776.05-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/402 (79%), Positives = 346/402 (86%), Gaps = 24/402 (5%)

Query: 3   SDETVEETNGDSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHE 62
           ++E VEE NGDSF  VKQR +DRS+KV QTK ++SK+AVQTKE+LSKQAVKIAKQAEEHE
Sbjct: 4   NEEAVEEANGDSFLAVKQRLRDRSKKVAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHE 63

Query: 63  RFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDF 122
           RFINKVTHLLGVLGFG FCFLLGARP DI YVYCLFY  FVPLRWIYYRFKKWHYYLLDF
Sbjct: 64  RFINKVTHLLGVLGFGAFCFLLGARPQDIPYVYCLFYFTFVPLRWIYYRFKKWHYYLLDF 123

Query: 123 CYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLL 182
           CYYANTIFLV LL+YPKNEKLFMVCFSFAEGPLAWALIVWRCSLVF+SVDKIVSVLIHLL
Sbjct: 124 CYYANTIFLVVLLLYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFSSVDKIVSVLIHLL 183

Query: 183 PGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVLYFL 242
           PG+VFFTIRWWNP +F AMHPEG++ RASWPYVE+KSYL TWLF+VPL AYTLWQVLYFL
Sbjct: 184 PGIVFFTIRWWNPTTFEAMHPEGTAHRASWPYVENKSYLWTWLFVVPLAAYTLWQVLYFL 243

Query: 243 IVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIFTVA 302
           IVNVLRRQRL+RDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNR+ MYI FQ +FTVA
Sbjct: 244 IVNVLRRQRLLRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRLLMYILFQGVFTVA 303

Query: 303 TMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKKAEIQPA----- 357
           T ALTVPIFLSY++HV+FQILK+SA +WNGGSFLLEVMP+QVILKEKKK+E QP      
Sbjct: 304 TTALTVPIFLSYEMHVVFQILKVSATVWNGGSFLLEVMPRQVILKEKKKSETQPVQTLLV 363

Query: 358 ------QPQRP------------QDQSLVLMENSIETNRSTE 381
                 QP +P            QDQS  L+E S E N S E
Sbjct: 364 PSAETNQPDQPPLVDYLKENGSQQDQS-SLVETSEEMNSSAE 404




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141655|ref|XP_002324182.1| predicted protein [Populus trichocarpa] gi|118486934|gb|ABK95300.1| unknown [Populus trichocarpa] gi|222865616|gb|EEF02747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255546053|ref|XP_002514086.1| conserved hypothetical protein [Ricinus communis] gi|223546542|gb|EEF48040.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297801074|ref|XP_002868421.1| hypothetical protein ARALYDRAFT_915673 [Arabidopsis lyrata subsp. lyrata] gi|297314257|gb|EFH44680.1| hypothetical protein ARALYDRAFT_915673 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15238520|ref|NP_198396.1| uncharacterized protein [Arabidopsis thaliana] gi|9758147|dbj|BAB08704.1| unnamed protein product [Arabidopsis thaliana] gi|14335068|gb|AAK59798.1| AT5g35460/MOK9_4 [Arabidopsis thaliana] gi|27764924|gb|AAO23583.1| At5g35460/MOK9_4 [Arabidopsis thaliana] gi|332006586|gb|AED93969.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449452540|ref|XP_004144017.1| PREDICTED: uncharacterized membrane protein C776.05-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356565856|ref|XP_003551152.1| PREDICTED: uncharacterized membrane protein C776.05-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|363806932|ref|NP_001242051.1| uncharacterized protein LOC100791853 [Glycine max] gi|255644678|gb|ACU22841.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224087959|ref|XP_002308273.1| predicted protein [Populus trichocarpa] gi|222854249|gb|EEE91796.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147766972|emb|CAN67685.1| hypothetical protein VITISV_009914 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
TAIR|locus:2169533381 AT5G35460 "AT5G35460" [Arabido 0.937 0.942 0.806 8.9e-157
DICTYBASE|DDB_G0288315581 DDB_G0288315 "transmembrane pr 0.788 0.519 0.3 2.9e-34
POMBASE|SPBC776.05403 SPBC776.05 "membrane transport 0.853 0.811 0.264 8.8e-31
CGD|CAL0003815410 orf19.988 [Candida albicans (t 0.853 0.797 0.254 4.5e-27
UNIPROTKB|Q59NC2410 CaO19.988 "Potential membrane 0.853 0.797 0.254 4.5e-27
SGD|S000003381432 YGR149W "Putative protein of u 0.707 0.627 0.282 1.2e-26
UNIPROTKB|G4MMY7547 MGG_06893 "Uncharacterized pro 0.665 0.466 0.292 6.1e-24
ASPGD|ASPL0000037961506 AN2940 [Emericella nidulans (t 0.624 0.472 0.308 7.4e-20
TAIR|locus:2169533 AT5G35460 "AT5G35460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1528 (542.9 bits), Expect = 8.9e-157, P = 8.9e-157
 Identities = 292/362 (80%), Positives = 319/362 (88%)

Query:     1 MLSDETVEETNG-DSFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAE 59
             M ++E    +NG DSF  VKQRFKDRS+KVVQT+ ++SK+AVQT+E+LSKQAVKIAKQAE
Sbjct:     1 MANNED-SNSNGLDSFDAVKQRFKDRSKKVVQTRELLSKQAVQTREILSKQAVKIAKQAE 59

Query:    60 EHERFINKVTHXXXXXXXXXXXXXXXARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYL 119
             EHERFINKVTH               ARP DI  VYC FY+IFVPLRWIYYRFKKWHYYL
Sbjct:    60 EHERFINKVTHLVGVLGFGGFCFLLGARPQDIPLVYCFFYVIFVPLRWIYYRFKKWHYYL 119

Query:   120 LDFCYYANTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLI 179
             LDFCYYANTIFLVDLL+YPKNEKLFMVCFSFAEGPLAWA+IVWRCSLVF+S DKIVSVLI
Sbjct:   120 LDFCYYANTIFLVDLLLYPKNEKLFMVCFSFAEGPLAWAIIVWRCSLVFSSPDKIVSVLI 179

Query:   180 HLLPGLVFFTIRWWNPESFAAMHPEGSSRRASWPYVEDKSYLLTWLFLVPLGAYTLWQVL 239
             HLLPGLVFFTIRWWNP +FAAMHP G+ RR SWPYVEDK+YL TWLFLVPL  YTLWQVL
Sbjct:   180 HLLPGLVFFTIRWWNPATFAAMHPVGTDRRVSWPYVEDKAYLFTWLFLVPLVVYTLWQVL 239

Query:   240 YFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFMYIAFQAIF 299
             YFLIVNVLRRQRL+RDPEVMTSYRELSKKA+KANN  W+LSGLLGDQNR++MYI FQAIF
Sbjct:   240 YFLIVNVLRRQRLLRDPEVMTSYRELSKKAEKANNKLWQLSGLLGDQNRIWMYILFQAIF 299

Query:   300 TVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKK-AEIQPAQ 358
             TVATMALTVPIFLSY+LHVIFQILKISAA+WNGGSFLLEVMP+QVI KEKKK AE+QP +
Sbjct:   300 TVATMALTVPIFLSYRLHVIFQILKISAAVWNGGSFLLEVMPRQVIQKEKKKKAEMQPIE 359

Query:   359 PQ 360
              Q
Sbjct:   360 EQ 361




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
DICTYBASE|DDB_G0288315 DDB_G0288315 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPBC776.05 SPBC776.05 "membrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0003815 orf19.988 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59NC2 CaO19.988 "Potential membrane protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000003381 YGR149W "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|G4MMY7 MGG_06893 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000037961 AN2940 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
scaffold_703415.1
annotation not avaliable (379 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.7__3043__AT5G35430.1
annotation not avaliable (787 aa)
       0.471

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
pfam10998111 pfam10998, DUF2838, Protein of unknown function (D 4e-40
>gnl|CDD|204577 pfam10998, DUF2838, Protein of unknown function (DUF2838) Back     alignment and domain information
 Score =  137 bits (348), Expect = 4e-40
 Identities = 47/110 (42%), Positives = 70/110 (63%)

Query: 67  KVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYA 126
           K++ + GVL      FL+G  P   HY Y + Y  F+P+R+  YR K +HY+L D CY+ 
Sbjct: 2   KISFIFGVLNLLLTGFLIGKYPELFHYWYTVLYFYFMPIRFYTYRKKGYHYFLADLCYFV 61

Query: 127 NTIFLVDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVS 176
           N + L+ + ++P + +LF+ CF  A G LA A+I WR SLVF+S+DK+ S
Sbjct: 62  NFLLLLFIWVFPSSARLFLSCFRLANGTLALAVITWRNSLVFHSIDKVTS 111


This bacterial family of proteins has no known function. Length = 111

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
KOG2895408 consensus Uncharacterized conserved protein [Funct 100.0
PF10998111 DUF2838: Protein of unknown function (DUF2838); In 100.0
TIGR00383318 corA magnesium Mg(2+) and cobalt Co(2+) transport 83.5
COG0598322 CorA Mg2+ and Co2+ transporters [Inorganic ion tra 82.41
>KOG2895 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=5.7e-112  Score=818.87  Aligned_cols=365  Identities=65%  Similarity=1.102  Sum_probs=331.4

Q ss_pred             CCccccccccCCchHHHHHHHhh-------------hhHHHHhhHHHHHHHH----------------HHHHHHHHHHHH
Q 016770            2 LSDETVEETNGDSFGKVKQRFKD-------------RSQKVVQTKAIMSKKA----------------VQTKEMLSKQAV   52 (383)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~   52 (383)
                      +.||+-++++.|+++..++|++|             |+||+.|++|-++||+                .++++++++|.+
T Consensus         9 IddEdnns~gLds~~~f~d~f~~kvvskyYhgsHls~~~kk~q~~eg~srqkdshhPhHlnrsrsflql~~r~~~s~q~~   88 (408)
T KOG2895|consen    9 IDDEDNNSNGLDSFDAFKDRFKDKVVSKYYHGSHLSRSKKKVQTREGLSRQKDSHHPHHLNRSRSFLQLQTREILSKQAV   88 (408)
T ss_pred             ccccccCcccchhHHHHhhhhcccchheeecchhhhHHHHHHhhHHhhhhcccccCchhhhcchhhhhHHHHHhHHHHHH
Confidence            46899999999999999999999             9999999999999999                778899999999


Q ss_pred             HHHHHHhhhhhhh-hhHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHhhhhhhhhhhheecccchhhhchhHHHHHHHH
Q 016770           53 KIAKQAEEHERFI-NKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLLDFCYYANTIFL  131 (383)
Q Consensus        53 ~i~~~~~~~~r~~-dKvsF~~GVl~i~~s~fl~G~~Pe~~~~~Yti~~~~lmPiR~y~Y~k~~~HYFLlDfCYfvN~l~l  131 (383)
                      +++|++++++|++ ||++|.+||+|++.+||++|++||++|+|||++++++||+|||||+++||||||+|||||+|+|++
T Consensus        89 ~~~~~~~~~~rF~neK~~~~~gv~~~~~~~fL~G~~Pe~~hl~Yti~~fV~~PlR~ytY~~kk~hYflaDFCY~~N~l~L  168 (408)
T KOG2895|consen   89 KIAKQAEEHERFINEKVTHLVGVLGFGGFCFLLGARPEDIHLVYTIFYFVFVPLRWYTYRFKKWHYFLADFCYYANTLFL  168 (408)
T ss_pred             HhhcccccceeeeccchhhhhHHHHHHHHHHHhccCcccceeeeeeeeheeeeeeEEEEEeccceeehhHHHHHHhHHHH
Confidence            9999999999999 799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCChhhHHHHHHhccCchhHHHHhhhcceeeccccchhhhhhhhhhhhhhhhhhccCcchhhccCCCCCcccCC
Q 016770          132 VDLLMYPKNEKLFMVCFSFAEGPLAWALIVWRCSLVFNSVDKIVSVLIHLLPGLVFFTIRWWNPESFAAMHPEGSSRRAS  211 (383)
Q Consensus       132 ~~iw~~P~s~~LF~~~F~la~GPLa~AIi~WRNSLVFHSiDK~TSlFIHi~Pplv~~~iRw~~~~~~~~~~p~~~~~~~s  211 (383)
                      ++||+||.|.+||++||++|.||||||||+|||||||||+||+||||||++||+|+|+|||+.|.++..-        ..
T Consensus       169 v~iwifP~s~~LF~~cfsf~~GtLawaVi~WRnSLvfhSiDKitS~fIH~~PplV~~tI~h~~p~~y~~d--------Rf  240 (408)
T KOG2895|consen  169 VDIWIFPKSEKLFMVCFSFAEGTLAWAVIVWRNSLVFHSIDKITSVFIHLLPPLVFFTIRHWNPATYATD--------RF  240 (408)
T ss_pred             HHhhhcccchhHhhhhhhhccccceeeeeeeecceeEeccchhheeeeeccCceeEEEEeecCchhhhhh--------cC
Confidence            9999999999999999999999999999999999999999999999999999999999999999988622        23


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhhheeecceeccCCCcchhHHHHHhhhccccchhhhhhccCCCchhHHH
Q 016770          212 WPYVEDKSYLLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMFM  291 (383)
Q Consensus       212 ~p~~~~~~~~~~~~~~~P~~~Y~iWQ~lY~~~i~v~rr~ki~~~~~~~TSf~~L~~~~~k~~~~~~~l~~~~~~~~~~~~  291 (383)
                      ||.++++.+..+|.+++|+++|++||++|++||+|.|. +.+++||||||||||++.. ++++..+++++.+|++.+.+|
T Consensus       241 p~~v~~k~~d~~~~~l~~s~~Y~lWQvlY~~fI~v~kq-~~i~~germTSf~~Lska~-~~n~kl~~l~~~lp~~~~~~~  318 (408)
T KOG2895|consen  241 PPYVEDKAYDFTWLFLVPSVVYTLWQVLYFLFINVLKQ-RLIRDGERMTSFRELSKAE-KANNKLWQLSGLLPDQNRIWM  318 (408)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-HhccCCcccchHHHHHHHH-hhcchHHhhcccCccccchhH
Confidence            45566777889999999999999999999999999874 5558889999999999654 445666799999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhccCceeeEEechhhhHHHHHhh--hhcCCCCCCCCc-ccccc
Q 016770          292 YIAFQAIFTVATMALTVPIFLSYKLHVIFQILKISAAIWNGGSFLLEVMPKQVILKEKKK--AEIQPAQPQRPQ-DQSLV  368 (383)
Q Consensus       292 fm~~Q~~ytv~Tmll~~p~~~sy~~h~~fl~~if~~svwNGAtyYidvFgkry~~ke~~k--~~~~~~~~~~~~-~~~~~  368 (383)
                      ||++|++||+.||+||.|++.++.+|++|++++|+||+||||+|||||||||. ++|+++  .|+|+.+++--. +..|.
T Consensus       319 y~l~Qy~y~v~TMllc~~w~~~kl~~~~Fl~l~f~wavwNGasyyidv~grr~-~~e~e~l~q~lqp~~~~~~s~~avs~  397 (408)
T KOG2895|consen  319 YILFQYIYTVATMLLCVPWFLSKLLHVIFLILKFSWAVWNGASYYIDVMGRRV-IQEEEKLKQELQPIEEQILSHEAVSH  397 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeehhhhhHHH-HHHHHHHHHhcCCChhhhcchhhcCC
Confidence            99999999999999999999999999999999999999999999999999998 555544  566655443222 44566


Q ss_pred             ccccccccc
Q 016770          369 LMENSIETN  377 (383)
Q Consensus       369 ~~~~~~~~~  377 (383)
                      +.||+++..
T Consensus       398 ~~~~~~~~~  406 (408)
T KOG2895|consen  398 PTENEPKST  406 (408)
T ss_pred             CcccCcCCC
Confidence            777777644



>PF10998 DUF2838: Protein of unknown function (DUF2838); InterPro: IPR021261 This bacterial family of proteins has no known function Back     alignment and domain information
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) Back     alignment and domain information
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.3 bits (127), Expect = 9e-08
 Identities = 41/315 (13%), Positives = 88/315 (27%), Gaps = 78/315 (24%)

Query: 4   DETVEETNGDSFGKVKQRFKDRSQKVV---QTKAIMSKKAVQTKEMLSKQAVKIAKQAEE 60
            + V  T+  S         D     +   + K+++ K      + L ++ +        
Sbjct: 274 FKQV--TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT------ 325

Query: 61  HERFINKVTHLLGVLGFGGFCFLLGARPHDIHYVYCLFYIIFVPLRWIYYRFKKWHYYLL 120
                    +    L       ++     D                W  ++     +   
Sbjct: 326 ---------NPR-RLS------IIAESIRDG------------LATWDNWK-----HVNC 352

Query: 121 DFCYYANTIFL-VDLLMYPKNEKLFMVCFSFAEG---PLAWALIVWRCSLVFNSVDKIVS 176
           D       I   +++L   +  K+F     F      P     ++W   ++ + V  +V+
Sbjct: 353 D--KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-FDVIKSDVMVVVN 409

Query: 177 VLIHLLPGLVFFTIRWWNPESF----------------AAMHPEGSSRRASWPYVEDKSY 220
            L      LV    +     +                  A+H     R     Y   K++
Sbjct: 410 KLHKY--SLVE---KQPKESTISIPSIYLELKVKLENEYALH-----RSIVDHYNIPKTF 459

Query: 221 LLTWLFLVPLGAYTLWQVLYFLIVNVLRRQRLVRDPEVMTSYRELSKKAQKANNIWWRLS 280
               L    L  Y    + + L  N+   +R+     V   +R L +K +  +  W    
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLK-NIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518

Query: 281 GLLGDQNRMFMYIAF 295
            +L    ++  Y  +
Sbjct: 519 SILNTLQQLKFYKPY 533


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query383
3hd7_A91 Vesicle-associated membrane protein 2; membrane pr 81.34
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A Back     alignment and structure
Probab=81.34  E-value=13  Score=29.67  Aligned_cols=68  Identities=18%  Similarity=0.154  Sum_probs=42.5

Q ss_pred             chHHHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--h--hhHHHHHHHHHHHHHHH
Q 016770           14 SFGKVKQRFKDRSQKVVQTKAIMSKKAVQTKEMLSKQAVKIAKQAEEHERF--I--NKVTHLLGVLGFGGFCF   82 (383)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~r~--~--dKvsF~~GVl~i~~s~f   82 (383)
                      +++.+|.-|.+-.+|+.+..|+|+..-+++. .|+.+.....+++++..|-  .  =|...++|+..+++...
T Consensus        13 ev~evk~iM~~NI~kvL~RgekL~~L~~kt~-~L~~~s~~F~~~A~~l~rkmwwkn~K~~iii~~iv~~il~i   84 (91)
T 3hd7_A           13 QVDEVVDIMRVNVDKVLERDQKLSELDDRAD-ALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIILII   84 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666667777777777777776666555 3455666666666665442  1  26666666666554433




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00