Citrus Sinensis ID: 016801

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTGR
cccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHccccccccccccccc
ccEEEEEcccccccccHHHHHHHHHcccccccHHHHccccccccccccccHccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccccccHHHHHHHHcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccHHHcEEcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccc
meslvsassrtqllfspaAVLFNQAATHSLRSSLsfnytysaepkhkTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISydkalykhdimgsKAHASMLAkqglisdsdknsiLRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIigepakklhtarsrndqvLTDFRLWCRDAIDTIVRSIQRLQVALVKLALkneglivpgythlqRAQPVLLQHLLLAYVEQLERDAGRLQDcrvrmnfcplgacalagtglpidrfmTAEAleftapmrnsidavsdRDFVLEFLSANSIIAIHLSRLGEEWVLWASeefgfitpsdsvstgssimpqkknpdpmelvrgksaRVIGDLVTLLTLckglplaynrdlqtgr
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKqglisdsdknSILRGLDEIERQIEAGkfmwrtdreDVHMNIEAALTDIIGEPAKKlhtarsrndqvltdFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLltlckglplaynrdlqtgr
MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTGR
************LLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHA*ML*************ILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT***************************SARVIGDLVTLLTLCKGLPLAYN*******
*************LFSPAAVLF*******************************************FEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQT**
**********TQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD**************PDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTGR
*****SASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYS*E**********************FEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD*****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESLVSASSRTQLLFSPAAVLFNQAATHSLRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQTGR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query382 2.2.26 [Sep-21-2011]
Q2RXE3 478 Argininosuccinate lyase O yes no 0.835 0.667 0.579 1e-106
C3K426 464 Argininosuccinate lyase O yes no 0.856 0.704 0.596 1e-106
Q3K4S8 464 Argininosuccinate lyase 2 yes no 0.856 0.704 0.593 1e-105
B0VDE4 477 Argininosuccinate lyase O yes no 0.835 0.668 0.589 1e-105
B7I338 477 Argininosuccinate lyase O yes no 0.835 0.668 0.589 1e-105
B7H1L9 477 Argininosuccinate lyase O yes no 0.835 0.668 0.589 1e-105
B7V5F3 464 Argininosuccinate lyase O yes no 0.856 0.704 0.596 1e-105
Q4K3X1 464 Argininosuccinate lyase O yes no 0.856 0.704 0.590 1e-105
Q02EA0 464 Argininosuccinate lyase O yes no 0.856 0.704 0.596 1e-105
P50987 464 Argininosuccinate lyase O yes no 0.856 0.704 0.596 1e-105
>sp|Q2RXE3|ARLY_RHORT Argininosuccinate lyase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=argH PE=3 SV=1 Back     alignment and function desciption
 Score =  385 bits (989), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/319 (57%), Positives = 229/319 (71%)

Query: 61  LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120
           +WGGRF+   +  +E    SI +DK LY+ DI GSKAH +ML   G++S +D  +IL GL
Sbjct: 18  IWGGRFDSGPSAVMEAINASIGFDKRLYRQDIAGSKAHCTMLVATGILSKADGEAILGGL 77

Query: 121 DEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRD 180
           D I  +IEAG F +    ED+HMNIE+ L D+IGE A +LHTARSRNDQV TDFRLW RD
Sbjct: 78  DRILAEIEAGDFPFSVALEDIHMNIESRLKDLIGEAAGRLHTARSRNDQVATDFRLWVRD 137

Query: 181 AIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRL 240
           AID +  ++ RLQ  L+  A ++   ++PG+THLQ AQPV   H LLAYVE + RD GR 
Sbjct: 138 AIDGVEGALARLQDVLITRAEEHADTVMPGFTHLQAAQPVTFGHHLLAYVEMIGRDRGRF 197

Query: 241 QDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANS 300
            D RVR+N  PLG+ ALAGT  PIDR MTA+ L F  P  NS+D VSDRDF LEFL+A S
Sbjct: 198 HDARVRLNESPLGSAALAGTSFPIDRAMTAQILGFDRPCANSLDGVSDRDFALEFLAAAS 257

Query: 301 IIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDL 360
           I +IHLSRL EE V+W S +FGF+   D+ STGSSIMPQK+NPD  ELVR K+ RVIGDL
Sbjct: 258 IASIHLSRLAEELVIWTSAQFGFVRLPDAYSTGSSIMPQKRNPDAAELVRAKAGRVIGDL 317

Query: 361 VTLLTLCKGLPLAYNRDLQ 379
            +LL + KGLPLAY++D+Q
Sbjct: 318 ASLLIVMKGLPLAYSKDMQ 336

Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) (taxid: 269796)
EC: 4EC: .EC: 3EC: .EC: 2EC: .EC: 1
>sp|C3K426|ARLY_PSEFS Argininosuccinate lyase OS=Pseudomonas fluorescens (strain SBW25) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q3K4S8|ARLY2_PSEPF Argininosuccinate lyase 2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=argH2 PE=3 SV=1 Back     alignment and function description
>sp|B0VDE4|ARLY_ACIBY Argininosuccinate lyase OS=Acinetobacter baumannii (strain AYE) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B7I338|ARLY_ACIB5 Argininosuccinate lyase OS=Acinetobacter baumannii (strain AB0057) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B7H1L9|ARLY_ACIB3 Argininosuccinate lyase OS=Acinetobacter baumannii (strain AB307-0294) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B7V5F3|ARLY_PSEA8 Argininosuccinate lyase OS=Pseudomonas aeruginosa (strain LESB58) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q4K3X1|ARLY_PSEF5 Argininosuccinate lyase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q02EA0|ARLY_PSEAB Argininosuccinate lyase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|P50987|ARLY_PSEAE Argininosuccinate lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=argH PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
224067080461 predicted protein [Populus trichocarpa] 0.853 0.707 0.886 1e-172
225459083 525 PREDICTED: argininosuccinate lyase [Viti 0.984 0.716 0.779 1e-171
449436950 523 PREDICTED: argininosuccinate lyase-like 0.897 0.655 0.826 1e-170
255545970481 argininosuccinate lyase, putative [Ricin 0.866 0.688 0.864 1e-169
356508027 512 PREDICTED: argininosuccinate lyase-like 0.845 0.630 0.869 1e-168
302142068478 unnamed protein product [Vitis vinifera] 0.848 0.677 0.873 1e-168
356515726 516 PREDICTED: argininosuccinate lyase-like 0.845 0.625 0.866 1e-167
388511499 517 unknown [Medicago truncatula] 0.879 0.649 0.819 1e-167
15238899 517 argininosuccinate lyase [Arabidopsis tha 0.853 0.630 0.868 1e-167
2252472 517 argininosuccinate lyase [Arabidopsis tha 0.853 0.630 0.868 1e-167
>gi|224067080|ref|XP_002302345.1| predicted protein [Populus trichocarpa] gi|222844071|gb|EEE81618.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 289/326 (88%), Positives = 309/326 (94%)

Query: 57  KEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSI 116
           KE KLWGGRFE++VTD VEKFTESIS+DK LYKHDIMGSKAHASMLAKQGL+S+SDK+SI
Sbjct: 3   KENKLWGGRFEQTVTDKVEKFTESISFDKELYKHDIMGSKAHASMLAKQGLMSESDKDSI 62

Query: 117 LRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRL 176
           L+GLDEI+R+IEAG+F WR DREDVHMNIEA LT++IGEPAKKLHTARSRNDQVLTDF+L
Sbjct: 63  LKGLDEIQRKIEAGEFEWREDREDVHMNIEATLTEMIGEPAKKLHTARSRNDQVLTDFKL 122

Query: 177 WCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERD 236
           WCRDAID I  SI+ LQVALVKLAL NEGLIVPGYTHLQRAQPVLL HLLLAYVEQLERD
Sbjct: 123 WCRDAIDRIAASIKHLQVALVKLALNNEGLIVPGYTHLQRAQPVLLPHLLLAYVEQLERD 182

Query: 237 AGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 296
           AGRL DC++RMNFCPLGACALAGTGLPIDRFMT+EAL FTAPMRNSIDAVSDRDFV+EFL
Sbjct: 183 AGRLLDCKLRMNFCPLGACALAGTGLPIDRFMTSEALGFTAPMRNSIDAVSDRDFVMEFL 242

Query: 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARV 356
           SANSI AIHLSRLGEEWVLWASEEFGF+TPSDSVSTGSSIMPQKKNPDPMELVRGKSARV
Sbjct: 243 SANSITAIHLSRLGEEWVLWASEEFGFLTPSDSVSTGSSIMPQKKNPDPMELVRGKSARV 302

Query: 357 IGDLVTLLTLCKGLPLAYNRDLQTGR 382
           IGDLVTLLTLCKGLPLAYNRDLQ  +
Sbjct: 303 IGDLVTLLTLCKGLPLAYNRDLQEDK 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225459083|ref|XP_002283809.1| PREDICTED: argininosuccinate lyase [Vitis vinifera] Back     alignment and taxonomy information
>gi|449436950|ref|XP_004136255.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] gi|449526427|ref|XP_004170215.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255545970|ref|XP_002514045.1| argininosuccinate lyase, putative [Ricinus communis] gi|223547131|gb|EEF48628.1| argininosuccinate lyase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356508027|ref|XP_003522764.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|302142068|emb|CBI19271.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356515726|ref|XP_003526549.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|388511499|gb|AFK43811.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|15238899|ref|NP_196653.1| argininosuccinate lyase [Arabidopsis thaliana] gi|8979726|emb|CAB96847.1| argininosuccinate lyase (AtArgH) [Arabidopsis thaliana] gi|24030227|gb|AAN41291.1| argininosuccinate lyase (AtArgH) [Arabidopsis thaliana] gi|332004226|gb|AED91609.1| argininosuccinate lyase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|2252472|emb|CAB10698.1| argininosuccinate lyase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
TAIR|locus:2183825 517 AT5G10920 [Arabidopsis thalian 0.853 0.630 0.868 3.8e-149
TIGR_CMR|GSU_0156 458 GSU_0156 "argininosuccinate ly 0.837 0.698 0.571 1e-91
TIGR_CMR|ECH_0937 470 ECH_0937 "argininosuccinate ly 0.835 0.678 0.554 5.9e-89
TIGR_CMR|SPO_0332 463 SPO_0332 "argininosuccinate ly 0.837 0.691 0.55 1.1e-87
TIGR_CMR|BA_4879 462 BA_4879 "argininosuccinate lya 0.837 0.692 0.537 2.4e-85
TIGR_CMR|DET_1261 461 DET_1261 "argininosuccinate ly 0.824 0.683 0.539 7.2e-84
TIGR_CMR|CHY_2259 456 CHY_2259 "argininosuccinate ly 0.840 0.703 0.520 2.2e-82
TIGR_CMR|CJE_1009 460 CJE_1009 "argininosuccinate ly 0.837 0.695 0.470 1.5e-74
UNIPROTKB|P24058 468 ASL2 "Argininosuccinate lyase" 0.853 0.696 0.460 5.1e-74
TIGR_CMR|SO_0279 455 SO_0279 "argininosuccinate lya 0.835 0.701 0.465 1.1e-73
TAIR|locus:2183825 AT5G10920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
 Identities = 283/326 (86%), Positives = 299/326 (91%)

Query:    54 SASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDK 113
             +ASKEVKLWGGRFEESVT+ VEKFTESIS+DK LYK DIMGSKAHASMLA QGLI+DSDK
Sbjct:    53 TASKEVKLWGGRFEESVTEKVEKFTESISFDKVLYKQDIMGSKAHASMLAHQGLITDSDK 112

Query:   114 NSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTD 173
             +SILRGLD+IERQIEA KF WRTDREDVHMNIEAALTD+IGEPAKKLHTARSRNDQV TD
Sbjct:   113 DSILRGLDDIERQIEANKFEWRTDREDVHMNIEAALTDLIGEPAKKLHTARSRNDQVATD 172

Query:   174 FRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQL 233
             FRLWCRDAIDTI+  I+ LQ ALV+LALKNE LIVPGYTHLQRAQPVLL H+LL +VEQL
Sbjct:   173 FRLWCRDAIDTIIVKIRNLQRALVELALKNEALIVPGYTHLQRAQPVLLPHVLLTFVEQL 232

Query:   234 ERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 293
             ERDAGR  DCR R+NF PLGACALAGTGLPIDRFMTA AL FT PMRNSIDAVSDRDFVL
Sbjct:   233 ERDAGRYVDCRARLNFSPLGACALAGTGLPIDRFMTANALGFTEPMRNSIDAVSDRDFVL 292

Query:   294 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKS 353
             EFL  N+   IHLSRLGEEWVLWASEEFGF+TPSDSVSTGSSIMPQKKNPDPMELVRGKS
Sbjct:   293 EFLYTNANTGIHLSRLGEEWVLWASEEFGFMTPSDSVSTGSSIMPQKKNPDPMELVRGKS 352

Query:   354 ARVIGDLVTLLTLCKGLPLAYNRDLQ 379
             ARVIGDLVT+LTLCKGLPLAYNRD Q
Sbjct:   353 ARVIGDLVTVLTLCKGLPLAYNRDFQ 378
GO:0003824 "catalytic activity" evidence=IEA
GO:0004056 "argininosuccinate lyase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0042450 "arginine biosynthetic process via ornithine" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
TIGR_CMR|GSU_0156 GSU_0156 "argininosuccinate lyase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0937 ECH_0937 "argininosuccinate lyase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0332 SPO_0332 "argininosuccinate lyase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4879 BA_4879 "argininosuccinate lyase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1261 DET_1261 "argininosuccinate lyase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2259 CHY_2259 "argininosuccinate lyase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_1009 CJE_1009 "argininosuccinate lyase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
UNIPROTKB|P24058 ASL2 "Argininosuccinate lyase" [Anas platyrhynchos (taxid:8839)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0279 SO_0279 "argininosuccinate lyase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2VYN2ARLY_MAGSA4, ., 3, ., 2, ., 10.55170.83500.6772yesno
A9HRH6ARLY_GLUDA4, ., 3, ., 2, ., 10.58150.85070.6827yesno
A3PMB7ARLY_RHOS14, ., 3, ., 2, ., 10.55480.83500.6772yesno
Q6FFB2ARLY_ACIAD4, ., 3, ., 2, ., 10.56440.85340.6834yesno
B7V5F3ARLY_PSEA84, ., 3, ., 2, ., 10.59630.85600.7047yesno
B0KH03ARLY_PSEPG4, ., 3, ., 2, ., 10.58710.85600.7047yesno
B1J1V0ARLY_PSEPW4, ., 3, ., 2, ., 10.58710.85600.7047yesno
Q88B94ARLY_PSESM4, ., 3, ., 2, ., 10.58710.85600.7047yesno
B0VDE4ARLY_ACIBY4, ., 3, ., 2, ., 10.58930.83500.6687yesno
C3K426ARLY_PSEFS4, ., 3, ., 2, ., 10.59630.85600.7047yesno
B8GSV2ARLY_THISH4, ., 3, ., 2, ., 10.58120.83760.6852yesno
Q7VVG6ARLY_BORPE4, ., 3, ., 2, ., 10.56170.84810.6849yesno
Q4K3X1ARLY_PSEF54, ., 3, ., 2, ., 10.59020.85600.7047yesno
Q02EA0ARLY_PSEAB4, ., 3, ., 2, ., 10.59630.85600.7047yesno
A7IG40ARLY_XANP24, ., 3, ., 2, ., 10.550.83760.6926yesno
Q3JDS2ARLY_NITOC4, ., 3, ., 2, ., 10.58120.83760.6852yesno
A4XNY5ARLY_PSEMY4, ., 3, ., 2, ., 10.59630.85600.7047yesno
Q2L1J6ARLY_BORA14, ., 3, ., 2, ., 10.56480.84810.6893yesno
Q6AR60ARLY_DESPS4, ., 3, ., 2, ., 10.54740.85600.7047yesno
Q1I314ARLY_PSEE44, ., 3, ., 2, ., 10.58710.85600.7047yesno
Q5FPK5ARLY_GLUOX4, ., 3, ., 2, ., 10.57860.83240.6611yesno
A4VGX6ARLY_PSEU54, ., 3, ., 2, ., 10.58400.85600.7047yesno
Q2RXE3ARLY_RHORT4, ., 3, ., 2, ., 10.57990.83500.6673yesno
Q3K4S8ARLY2_PSEPF4, ., 3, ., 2, ., 10.59320.85600.7047yesno
Q28V48ARLY_JANSC4, ., 3, ., 2, ., 10.55550.84810.6806yesno
A1WVT8ARLY_HALHL4, ., 3, ., 2, ., 10.56060.86380.7096yesno
A1ATU1ARLY_PELPD4, ., 3, ., 2, ., 10.57180.83760.6986yesno
A5EB50ARLY_BRASB4, ., 3, ., 2, ., 10.5750.83760.6911yesno
B3E9X6ARLY_GEOLS4, ., 3, ., 2, ., 10.56250.83760.6986yesno
B2I1W9ARLY_ACIBC4, ., 3, ., 2, ., 10.58620.83500.6687yesno
Q0BWK6ARLY_HYPNA4, ., 3, ., 2, ., 10.55650.85600.7032yesno
Q39Z69ARLY_GEOMG4, ., 3, ., 2, ., 10.57810.83760.6986yesno
Q500N3ARLY_PSEU24, ., 3, ., 2, ., 10.58710.85600.7047yesno
Q2SQ67ARLY_HAHCH4, ., 3, ., 2, ., 10.57180.83760.6837yesno
A4WVB9ARLY_RHOS54, ., 3, ., 2, ., 10.55350.85600.6942yesno
P59618ARLY_PSEPK4, ., 3, ., 2, ., 10.59020.85600.7047yesno
B0VMC7ARLY_ACIBS4, ., 3, ., 2, ., 10.58620.83500.6687yesno
Q0A574ARLY_ALHEH4, ., 3, ., 2, ., 10.57180.83760.6837yesno
C1DJ48ARLY_AZOVD4, ., 3, ., 2, ., 10.58710.85600.7047yesno
Q48QD3ARLY_PSE144, ., 3, ., 2, ., 10.58710.85600.7047yesno
B5ED16ARLY_GEOBB4, ., 3, ., 2, ., 10.56560.83760.6986yesno
P50987ARLY_PSEAE4, ., 3, ., 2, ., 10.59630.85600.7047yesno
B7I338ARLY_ACIB54, ., 3, ., 2, ., 10.58930.83500.6687yesno
Q74GT9ARLY_GEOSL4, ., 3, ., 2, ., 10.57180.83760.6986yesno
C6E6Y9ARLY_GEOSM4, ., 3, ., 2, ., 10.56250.83760.6986yesno
Q1QSV4ARLY_CHRSD4, ., 3, ., 2, ., 10.56600.83240.6809yesno
B7H1L9ARLY_ACIB34, ., 3, ., 2, ., 10.58930.83500.6687yesno
A6VE40ARLY_PSEA74, ., 3, ., 2, ., 10.59320.85600.7047yesno
Q609I6ARLY_METCA4, ., 3, ., 2, ., 10.57400.84810.6967yesno
A5D4Y2ARLY_PELTS4, ., 3, ., 2, ., 10.5750.83760.6956yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.2.10.824
3rd Layer4.3.20.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_II0485
argininosuccinate lyase (EC-4.3.2.1) (461 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.X.3427.1
hypothetical protein (424 aa)
• •• •• 0.999
grail3.0090013702
argininosuccinate synthase family protein (EC-6.3.4.5) (470 aa)
• •• •• 0.999
gw1.V.1402.1
SubName- Full=Putative uncharacterized protein; (326 aa)
• ••  • 0.984
gw1.130.69.1
N-acetyl-gamma-glutamyl-phosphate reductase (EC-1.2.1.38) (352 aa)
• ••  • 0.982
estExt_Genewise1_v1.C_2320006
hypothetical protein (482 aa)
• ••  • 0.979
estExt_Genewise1_v1.C_LG_IV0804
arginine decarboxylase (EC-4.1.1.19) (731 aa)
     •• 0.954
eugene3.00021348
arginase (EC-3.5.3.1) (338 aa)
     •• 0.943
gw1.X.4384.1
carbamoyl-phosphate synthase (EC-6.3.4.16) (1081 aa)
•  • •• 0.936
gw1.6145.3.1
annotation not avaliable (279 aa)
• •• •• 0.935
gw1.193.135.1
annotation not avaliable (279 aa)
• •• •• 0.933

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
PLN02646 474 PLN02646, PLN02646, argininosuccinate lyase 0.0
PRK00855 459 PRK00855, PRK00855, argininosuccinate lyase; Provi 0.0
cd01359 435 cd01359, Argininosuccinate_lyase, Argininosuccinat 1e-175
COG0165 459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 1e-174
TIGR00838 455 TIGR00838, argH, argininosuccinate lyase 1e-155
PRK04833 455 PRK04833, PRK04833, argininosuccinate lyase; Provi 1e-124
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 1e-120
PRK12308 614 PRK12308, PRK12308, bifunctional argininosuccinate 1e-120
pfam00206312 pfam00206, Lyase_1, Lyase 7e-80
PRK02186 887 PRK02186, PRK02186, argininosuccinate lyase; Provi 3e-52
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 2e-51
PRK06705 502 PRK06705, PRK06705, argininosuccinate lyase; Provi 2e-39
PRK06389 434 PRK06389, PRK06389, argininosuccinate lyase; Provi 4e-31
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 1e-20
COG0015 438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 6e-19
PRK13353 473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 3e-17
TIGR00928 435 TIGR00928, purB, adenylosuccinate lyase 7e-17
cd01597 437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 9e-17
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 1e-14
COG1027 471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 3e-14
TIGR00839 468 TIGR00839, aspA, aspartate ammonia-lyase 1e-13
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 2e-12
cd01357450 cd01357, Aspartase, Aspartase 3e-12
PRK14515 479 PRK14515, PRK14515, aspartate ammonia-lyase; Provi 4e-12
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 2e-10
PRK09053 452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 5e-09
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 6e-09
PRK12273 472 PRK12273, aspA, aspartate ammonia-lyase; Provision 9e-09
PRK08540 449 PRK08540, PRK08540, adenylosuccinate lyase; Review 3e-08
PRK06390 451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 9e-08
COG0114462 COG0114, FumC, Fumarase [Energy production and con 1e-07
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 2e-06
cd01362 455 cd01362, Fumarase_classII, Class II fumarases 2e-05
PRK08470 442 PRK08470, PRK08470, adenylosuccinate lyase; Provis 4e-05
PRK00485 464 PRK00485, fumC, fumarate hydratase; Reviewed 5e-05
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisiona 2e-04
PRK07492 435 PRK07492, PRK07492, adenylosuccinate lyase; Provis 0.002
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 0.003
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information 
 Score =  648 bits (1673), Expect = 0.0
 Identities = 272/325 (83%), Positives = 294/325 (90%)

Query: 55  ASKEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKN 114
           A+KE KLWGGRFEE VT AVEKF ESIS+DK LYK DIMGSKAHASMLAKQG+I+D D++
Sbjct: 12  AAKEKKLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLAKQGIITDEDRD 71

Query: 115 SILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDF 174
           SIL GLDEIE++IEAGKF WR DREDVHMN EA LT++IGEPAKKLHTARSRNDQV TD 
Sbjct: 72  SILDGLDEIEKEIEAGKFEWRPDREDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDT 131

Query: 175 RLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLE 234
           RLWCRDAID I + I+ LQVALV+LA KN  L+VPGYTHLQRAQPVLL H LL++VEQLE
Sbjct: 132 RLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLE 191

Query: 235 RDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLE 294
           RDAGRL DCR R+NFCPLG+CALAGTGLPIDRFMTA+ L FTAPMRNSIDAVSDRDFVLE
Sbjct: 192 RDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVLE 251

Query: 295 FLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSA 354
           FL ANSI AIHLSRLGEEWVLWASEEFGF+TPSD+VSTGSSIMPQKKNPDPMELVRGKSA
Sbjct: 252 FLFANSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSA 311

Query: 355 RVIGDLVTLLTLCKGLPLAYNRDLQ 379
           RVIGDLVT+L LCKGLP AYNRDLQ
Sbjct: 312 RVIGDLVTVLALCKGLPTAYNRDLQ 336

Length = 474
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|235010 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|237743 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 382
COG0165 459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
KOG1316 464 consensus Argininosuccinate lyase [Amino acid tran 100.0
PLN02646 474 argininosuccinate lyase 100.0
PRK00855 459 argininosuccinate lyase; Provisional 100.0
TIGR00838 455 argH argininosuccinate lyase. This model describes 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
PRK04833 455 argininosuccinate lyase; Provisional 100.0
PRK06389 434 argininosuccinate lyase; Provisional 100.0
PRK13353 473 aspartate ammonia-lyase; Provisional 100.0
PRK12273 472 aspA aspartate ammonia-lyase; Provisional 100.0
PRK06705 502 argininosuccinate lyase; Provisional 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PRK14515 479 aspartate ammonia-lyase; Provisional 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
cd01359 435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
TIGR00839 468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
COG1027 471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
PRK02186 887 argininosuccinate lyase; Provisional 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
cd01597 437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
PRK08470 442 adenylosuccinate lyase; Provisional 100.0
PRK07492 435 adenylosuccinate lyase; Provisional 100.0
TIGR00928 435 purB adenylosuccinate lyase. This family consists 100.0
PRK08540 449 adenylosuccinate lyase; Reviewed 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PRK07380 431 adenylosuccinate lyase; Provisional 100.0
PRK09053 452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PRK06390 451 adenylosuccinate lyase; Provisional 100.0
COG0015 438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
cd03302 436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
KOG1317487 consensus Fumarase [Energy production and conversi 100.0
PRK09285 456 adenylosuccinate lyase; Provisional 100.0
cd01598 425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
PLN02848 458 adenylosuccinate lyase 100.0
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 100.0
KOG2700 481 consensus Adenylosuccinate lyase [Nucleotide trans 100.0
PRK08937 216 adenylosuccinate lyase; Provisional 99.8
KOG2700 481 consensus Adenylosuccinate lyase [Nucleotide trans 93.19
PF1092559 DUF2680: Protein of unknown function (DUF2680); In 86.65
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=8.1e-91  Score=695.01  Aligned_cols=323  Identities=59%  Similarity=0.892  Sum_probs=319.4

Q ss_pred             cccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCC
Q 016801           59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR  138 (382)
Q Consensus        59 ~~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~  138 (382)
                      .++|||||++++++.+..|+.|+.+|++++++++.+.+||+++|.+.|+|+++++++|+++|.+|.+++..++|.+++..
T Consensus         3 ~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~~   82 (459)
T COG0165           3 NKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPDD   82 (459)
T ss_pred             CCCCCCCccCCCcHHHHHHhccchhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCcc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999888889999999


Q ss_pred             cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801          139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ  218 (382)
Q Consensus       139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~  218 (382)
                      ||+|+++|++|.+++|+.||++|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+++||||||+|+||
T Consensus        83 EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~AQ  162 (459)
T COG0165          83 EDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRAQ  162 (459)
T ss_pred             ccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCcccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801          219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA  298 (382)
Q Consensus       219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~  298 (382)
                      |+|||||+.+|+++|.||++||.+++++++.+|||+||++||++++||+++|++|||+.+..|+++++++||+++|++++
T Consensus       163 Pvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~~  242 (459)
T COG0165         163 PVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLSA  242 (459)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801          299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL  378 (382)
Q Consensus       299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~  378 (382)
                      +++++++|||||+||++|+|.|||+|++||++++|||||||||||+.+|++|+++++|.|+..++++.+||+|++||||+
T Consensus       243 ~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDl  322 (459)
T COG0165         243 AALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRDL  322 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q 016801          379 QTG  381 (382)
Q Consensus       379 qe~  381 (382)
                      ||+
T Consensus       323 Qed  325 (459)
T COG0165         323 QED  325 (459)
T ss_pred             Hhh
Confidence            997

>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02646 argininosuccinate lyase Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>KOG1317 consensus Fumarase [Energy production and conversion] Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
2e9f_A 462 Crystal Structure Of T.th.hb8 Argininosuccinate Lya 1e-101
1hy1_A 468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 3e-83
1k7w_A 468 Crystal Structure Of S283a Duck Delta 2 Crystallin 9e-83
1tju_A 474 Crystal Structure Of T161s Duck Delta 2 Crystallin 1e-82
1tjv_A 474 Crystal Structure Of T161d Duck Delta 2 Crystallin 2e-82
1auw_A 468 H91n Delta 2 Crystallin From Duck Length = 468 2e-82
1tj7_A 457 Structure Determination And Refinement At 2.44 A Re 8e-82
1aos_A 464 Human Argininosuccinate Lyase Length = 464 2e-81
1u15_A 472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 1e-80
1k62_A 464 Crystal Structure Of The Human Argininosuccinate Ly 1e-80
1hy0_A 466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 2e-77
1dcn_A 447 Inactive Mutant H162n Of Delta 2 Crystallin With Bo 5e-77
1xwo_A 465 Crystal Structrue Of Goose Delta Crystallin Length 3e-76
1i0a_A 466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 3e-71
1re5_A 450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 2e-15
3r6y_A401 Crystal Structure Of Chymotrypsin-Treated Aspartase 7e-14
1j3u_A 468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 8e-14
3c8t_A 451 Crystal Structure Of Fumarate Lyase From Mesorhizob 9e-12
4adl_A 495 Crystal Structures Of Rv1098c In Complex With Malat 2e-10
3no9_A 475 Crystal Structure Of Apo Fumarate Hydratase From My 2e-10
3qbp_A 478 Crystal Structure Of Fumarase Fum From Mycobacteriu 3e-10
3rrp_A 471 Crystal Structure Of Fumarate Hydratase Fum From My 3e-10
1q5n_A 454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 4e-10
4apa_A 474 Crystal Structure Of Mycobacterium Tuberculosis Fum 5e-10
4apb_A 474 Crystal Structure Of Mycobacterium Tuberculosis Fum 8e-10
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 3e-09
3rd8_A 489 Crystal Structure Of Fumarate Hydratase Class Ii My 2e-08
1yfm_A488 Recombinant Yeast Fumarase Length = 488 2e-07
3tv2_A459 Structure Of A Class Ii Fumarate Hydratase From Bur 3e-07
3e04_A490 Crystal Structure Of Human Fumarate Hydratase Lengt 5e-07
2x75_A 431 Staphylococcus Aureus Adenylosuccinate Lyase Length 1e-06
2pfm_A 444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 1e-06
1f1o_A 431 Structural Studies Of Adenylosuccinate Lyases Lengt 1e-06
4eei_A 438 Crystal Structure Of Adenylosuccinate Lyase From Fr 3e-06
1jsw_A 478 Native L-Aspartate Ammonia Lyase Length = 478 4e-06
1kq7_A 467 E315q Mutant Form Of Fumarase C From E.Coli Length 9e-06
1fup_A 472 Fumarase With Bound Pyromellitic Acid Length = 472 9e-06
2fus_A 467 Mutations Of Fumarase That Distinguish Between The 1e-05
1fuo_A 467 Fumarase C With Bound Citrate Length = 467 1e-05
3oce_A 474 Crystal Structure Of Fumarate Lyase:delta Crystalli 3e-05
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 4e-05
1fur_A 467 Fumarase Mutant H188n With Bound Substrate L-Malate 7e-05
2fel_A359 3-carboxy-cis,cis-muconate Lactonizing Enzyme From 3e-04
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 7e-04
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase Complexed With L-arginine Length = 462 Back     alignment and structure 
Iteration: 1

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/322 (56%), Positives = 233/322 (72%), Gaps = 2/322 (0%)
Query: 60  KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119
           + WGGRF E       +F  S+++D+AL++ D+  ++ HA ML   GL+S  +  +IL+G
Sbjct: 4   RTWGGRFGEGPDALAARFNASLAFDRALWREDLWQNRVHARMLHAVGLLSAEELEAILKG 63
Query: 120 LDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCR 179
           LD IE +IEAG F WR + EDVHMN+EA LT+++G P  KLHTARSRNDQV TD RL+ R
Sbjct: 64  LDRIEEEIEAGTFPWREELEDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLYLR 123
Query: 180 DAIDTIVRSIQRLQVALVKLALK--NEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDA 237
            AID ++  +  L+  LV+ A K  +   ++PGYTHLQRAQPVLL H  LAY E L+RDA
Sbjct: 124 GAIDELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDA 183
Query: 238 GRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297
           GRL+D + R+N  PLGA ALAGTG PIDR  TA  L F APMRNS+DAV+ RDF LE LS
Sbjct: 184 GRLEDAKERLNESPLGAAALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLS 243
Query: 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVI 357
           A +I  +HLSR+ EE +L+++EEFGF+   D+ +TGSSIMPQKKNPD +EL+R K+ RV+
Sbjct: 244 ALNIGMLHLSRMAEELILYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVL 303
Query: 358 GDLVTLLTLCKGLPLAYNRDLQ 379
           G  V L  + KGLPLAYN+DLQ
Sbjct: 304 GAFVGLSAVVKGLPLAYNKDLQ 325
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
>pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 Back     alignment and structure
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 Back     alignment and structure
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 Back     alignment and structure
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From Bacillus Sp. Ym55-1 Length = 401 Back     alignment and structure
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate Length = 495 Back     alignment and structure
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (Rv1098c) S318a In Apo Form Length = 474 Back     alignment and structure
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase ( Rv1098c) S318c In Complex With Fumarate Length = 474 Back     alignment and structure
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii Mycobacterium Smegmatis Length = 489 Back     alignment and structure
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|3TV2|A Chain A, Structure Of A Class Ii Fumarate Hydratase From Burkholderia Pseudomallei Length = 459 Back     alignment and structure
>pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Francisella Tularensis Complexed With Amp And Succinate Length = 438 Back     alignment and structure
>pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 Back     alignment and structure
>pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 Back     alignment and structure
>pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 Back     alignment and structure
>pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 Back     alignment and structure
>pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 Back     alignment and structure
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure
>pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 Back     alignment and structure
>pdb|2FEL|A Chain A, 3-carboxy-cis,cis-muconate Lactonizing Enzyme From Agrobacterium Radiobacter S2 Length = 359 Back     alignment and structure
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
1tj7_A 457 Argininosuccinate lyase; crystallin, E. coli, fuma 0.0
2e9f_A 462 Argininosuccinate lyase; alpha helix bundle; HET: 0.0
1k7w_A 468 Delta 2 crystallin; eye lens protein, argininosucc 0.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 6e-20
3c8t_A 451 Fumarate lyase; structural genomics, PSI-2, protei 1e-19
1q5n_A 454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 8e-19
1re5_A 450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 4e-18
1c3c_A 429 Protein (adenylosuccinate lyase); purine biosynthe 6e-17
2pfm_A 444 Adenylosuccinate lyase; PURB, purine biosynthesis, 1e-15
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 3e-14
4eei_A 438 Adenylosuccinate lyase; structural genomics, niaid 5e-14
1jsw_A 478 L-aspartase, L-aspartate ammonia-lyase; amino acid 2e-11
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 3e-11
3r6q_A 468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 5e-11
2j91_A 503 Adenylosuccinate lyase; disease mutation, adenylos 9e-11
3bhg_A 459 Adenylosuccinate lyase; structural G PSI-2, protei 2e-10
1yis_A 478 Adenylosuccinate lyase; structural genomics, PSI, 5e-10
2ptr_A 462 Adenylosuccinate lyase; mutant-substrate complex; 3e-09
1fur_A 467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 9e-09
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 2e-08
2qga_B 465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 2e-08
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 3e-08
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 3e-08
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 4e-08
4adm_A 495 Fumarase C, fumarate hydratase class II; lyase, tr 2e-07
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
 Score =  591 bits (1526), Expect = 0.0
 Identities = 149/321 (46%), Positives = 207/321 (64%), Gaps = 1/321 (0%)

Query: 60  KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG 119
            LWGGRF ++     ++F +S+ +D  L + DI+GS A +  L   G+++  ++  +   
Sbjct: 2   ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEA 61

Query: 120 LDEIERQIEAGKF-MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWC 178
           L+ +   + A    +  +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC
Sbjct: 62  LNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWC 121

Query: 179 RDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAG 238
           +D +  ++ + ++LQ ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  
Sbjct: 122 KDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDES 181

Query: 239 RLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298
           RLQD   R++  PLG  ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA
Sbjct: 182 RLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA 241

Query: 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIG 358
            +I  +HLSR  E+ + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G
Sbjct: 242 AAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQG 301

Query: 359 DLVTLLTLCKGLPLAYNRDLQ 379
            L  ++   KGLPLAYN+D+Q
Sbjct: 302 ALTGMMMTLKGLPLAYNKDMQ 322
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
1tj7_A 457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
2e9f_A 462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
1k7w_A 468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
3r6q_A 468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
1fur_A 467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
4adm_A 495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
1jsw_A 478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
1q5n_A 454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
3c8t_A 451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
1c3c_A 429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
2pfm_A 444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
4eei_A 438 Adenylosuccinate lyase; structural genomics, niaid 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
1re5_A 450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
1yis_A 478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
2qga_B 465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
2ptr_A 462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
3bhg_A 459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
2j91_A 503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
Probab=100.00  E-value=1e-84  Score=665.81  Aligned_cols=322  Identities=46%  Similarity=0.758  Sum_probs=312.7

Q ss_pred             ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccc-cCC
Q 016801           60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-TDR  138 (382)
Q Consensus        60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~-~~~  138 (382)
                      +|||+||++.+++.+++|+.++.+|+.++++++.+++|||++|+++|+||++++++|.++|++|..+...++|+++ ..+
T Consensus         2 ~~~~gr~~~~~~~~~~~f~~s~~~d~~l~~~~i~~~~A~a~a~~~~Gii~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~   81 (457)
T 1tj7_A            2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDA   81 (457)
T ss_dssp             -CCCTTCSSCCCHHHHHHHCCHHHHGGGHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHCGGGGGGSCC
T ss_pred             cccccccccchHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhHhcCCcCcCCCCC
Confidence            6999999999999999999999999999999999999999999999999999999999999999988888889887 568


Q ss_pred             cchhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccc
Q 016801          139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ  218 (382)
Q Consensus       139 ~dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~  218 (382)
                      ||+||++|+++.+++|+.|+|||+|+||||++||+++|++|+++..|.+.|..|+++|.++|++|++++||||||+||||
T Consensus        82 ~dv~~~v~~~l~e~~g~~g~~vH~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~  161 (457)
T 1tj7_A           82 EDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQ  161 (457)
T ss_dssp             SSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEE
T ss_pred             CcHHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCe
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHH
Q 016801          219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA  298 (382)
Q Consensus       219 P~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~  298 (382)
                      ||||||+|++|+++|.||++||++++++++.+||||||++||++++|++++++.|||+.+..|+++|+++||++++++++
T Consensus       162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~  241 (457)
T 1tj7_A          162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSA  241 (457)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHH
T ss_pred             echHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhh
Q 016801          299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL  378 (382)
Q Consensus       299 l~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~  378 (382)
                      ++.++++|+|||+||++|+|+|||||++|+.+.+||||||||+||+.+|.++++|++|+|++.+++++++++|++||||+
T Consensus       242 l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl  321 (457)
T 1tj7_A          242 AAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDM  321 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcch
Confidence            99999999999999999999999999998777789999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q 016801          379 QTG  381 (382)
Q Consensus       379 qe~  381 (382)
                      |++
T Consensus       322 ~~~  324 (457)
T 1tj7_A          322 QED  324 (457)
T ss_dssp             GGH
T ss_pred             hhH
Confidence            975
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 382
d1tj7a_ 455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 2e-92
d1k62b_ 459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 2e-87
d1tjva_ 449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 3e-81
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 7e-49
d1c3ca_ 429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 3e-44
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 3e-43
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 3e-39
d1q5na_ 444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 5e-35
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 5e-33
d1re5a_ 448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 1e-32
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 5e-30
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 2e-24
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

 Score =  282 bits (723), Expect = 2e-92
 Identities = 149/320 (46%), Positives = 207/320 (64%), Gaps = 1/320 (0%)

Query: 61  LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL 120
           LWGGRF ++     ++F +S+ +D  L + DI+GS A +  L   G+++  ++  +   L
Sbjct: 1   LWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEAL 60

Query: 121 DEIERQIEAGKF-MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCR 179
           + +   + A    +  +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC+
Sbjct: 61  NVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCK 120

Query: 180 DAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGR 239
           D +  ++ + ++LQ ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  R
Sbjct: 121 DTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESR 180

Query: 240 LQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN 299
           LQD   R++  PLG  ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA 
Sbjct: 181 LQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAA 240

Query: 300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGD 359
           +I  +HLSR  E+ + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G 
Sbjct: 241 AIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGA 300

Query: 360 LVTLLTLCKGLPLAYNRDLQ 379
           L  ++   KGLPLAYN+D+Q
Sbjct: 301 LTGMMMTLKGLPLAYNKDMQ 320
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
d1k62b_ 459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tj7a_ 455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1tjva_ 449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
d1re5a_ 448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1f1oa_ 408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1c3ca_ 429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1q5na_ 444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-81  Score=639.50  Aligned_cols=322  Identities=46%  Similarity=0.742  Sum_probs=315.8

Q ss_pred             ccccCCCCcchHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCcccccCCc
Q 016801           60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDRE  139 (382)
Q Consensus        60 ~lwg~~~~~~~~~~~~~f~~~~~~d~~l~~a~i~v~~A~a~a~~e~GiI~~~~a~~I~~al~~i~~~~~~~~f~~~~~~~  139 (382)
                      ++|||||++++++.++.|+.|+.+|+++++++|.+.+||++||.++|+||++++++|.++|++|..+...+.|++++..|
T Consensus         2 klW~gr~~~~~~~~~~~f~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~I~~al~~i~~~~~~~~~~~~~~~e   81 (459)
T d1k62b_           2 KLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLTKAEMDQILHGLDKVAEEWAQGTFKLNSNDE   81 (459)
T ss_dssp             CSSCSCCCCSSCHHHHHTTCCHHHHGGGHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCCCCTTCC
T ss_pred             CCCCccCCcchhHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999998888999999899


Q ss_pred             chhHHHHHHHHHHhCCCCceeccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccc
Q 016801          140 DVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP  219 (382)
Q Consensus       140 dv~~a~e~~l~e~~G~~g~~lH~G~SsnDi~~Ta~~L~lr~~l~~L~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P  219 (382)
                      |+|+++|..+.+.+|+.++|||+|+||||++||+++|++|+.+..|.+.|..|+++|.++|++|++++||||||+|||||
T Consensus        82 d~~~~ie~~l~~~~g~~~~~vH~G~S~nD~~~Ta~~L~~r~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P  161 (459)
T d1k62b_          82 DIHTANERRLKELIGATAGKLHTGRSRNDQVVTDLRLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQP  161 (459)
T ss_dssp             SHHHHHHHHHHHTTSSGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEE
T ss_pred             chHHHHHHHHHHhhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccceecceeecccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCcccccCCCCCCChHHHHHHcCCCCCCCCchhhccchHHHHHHHHHH
Q 016801          220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN  299 (382)
Q Consensus       220 ~T~G~~~~~~a~~l~r~~~rL~~~~~~~~~~~lGggA~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l  299 (382)
                      ||||||+++|+++|.|+++||.+++++++.+|||||+++|+++++|++++++.|||..+..|+++|+++||+++++++++
T Consensus       162 ~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lGg~a~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~sRd~~~e~~~~l  241 (459)
T d1k62b_         162 IRWSHWILSHAVALTRDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSERDFVAEFLFWR  241 (459)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCTTCTTTTCCTTCCCHHHHHHHTTCSCBCSCHHHHHHCCHHHHHHHHHH
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCcccchhhhhhHHhhccccccchhhhhcchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcccccceeecCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHcCCCcchhhhhc
Q 016801          300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ  379 (382)
Q Consensus       300 ~~la~~L~kia~Dl~llss~e~gev~l~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~~~~~~~~~p~~~~rD~q  379 (382)
                      +.++++|+|||+||++|+++|+|++.+|+++++|||||||||||+.+|.++++|.++.|+..+++.+++|+|++||||+|
T Consensus       242 ~~l~~~l~ria~Dl~l~~~~e~~~~~~~~~~~~GSSiMPqKrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~  321 (459)
T d1k62b_         242 SLCMTHLSRMAEDLILYCTKEFSFVQLSDAYSTGSSLMPRKKNPDSLELIRSKAGRVFGRCAGLLMTLKGLPSTYNKDLQ  321 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTTCSEECCGGGCEECSSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGG
T ss_pred             hHHHHHHHHHHHHHHHhccccccceeecccccccccccccccccHHHHHHHHHhhhhhhhhhhHHHHHhcChhhhcccch
Confidence            99999999999999999999999999998999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 016801          380 TG  381 (382)
Q Consensus       380 e~  381 (382)
                      ++
T Consensus       322 ~~  323 (459)
T d1k62b_         322 ED  323 (459)
T ss_dssp             GH
T ss_pred             hc
Confidence            74
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure