Citrus Sinensis ID: 016824

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MSQLHSNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEWASMEESELSPGPNGFSLLVYIWKK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEccccccccEEEEEEccccccccccccccccccccccccEEEEccccccEEccccccEEEEEEcccccccEEEEEEccccccccccccccccEEEEEEccEEEEEEcccHHHHHHHHHcccccccccccEEEEEEEEEEcccEEEEEEEEcccccEEEEEEcccccccEEEEEccEEEEEEEEccccccccEEEEEcccEEEEEEEcccccccccccccccccccEEEEEEEcccccccccccHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccHcccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEHcHcccEEEEEEccccccccccccccccccccccccEEEEEEcccHHHcccccEEEEEEcccccccEEEEEEEcHHccccccccccccEEEEEEEccEEEEEEccccHHHHHHHccccccccccccEEEEEEcEEcccEEEEEEEEEcccEEEEEEEEEcccccEEEEEEcccEEEEEEEEEEEEcccEEEEEcccEEEEEEEccHHHccccccccccccccEEEEEEEccccccccccccccHHHHHHcccccccHHHHHHHHHcHHcccccccccccccccccccccccHHccccHHHHHHcccccccEEEEEEccc
Coil and Loop (DISEMBL)
msqlhsnssftacffpttttknsdhhpsdpptpppppapisgkpnlstclynTHLGLFSLTwsmtlfghslhldhhpfdygnsspisfcsnssfshaafsFHLHIKPLIFwkkrgskklSVITTNKASKNIQLFWDLskakfgsgpepqsgFYIAVVVDGEMSLLVGDCIKEAYAKtkaqkpersqapQALVLRREHvfgnkvyttkakfggktrdvsidcstsndarlcfsVDNVRVLQIKRLKwkfrgneridvdgvpvQISWDVYNWLFDdfksnkndgnghAVFMFRfedtvdneeeqepmwqlqqsscsnfgmsGIEWRKMRKSLMRTarssssssismsssssgcsssvmewasmeeselspgpngfSLLVYIWKK
Flexible Loop (DISEMBL)
msqlhsnssfTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYaktkaqkpersqapqalvlrrehvfgnkvyttkakfggktrdVSIDCstsndarlcfsvdnVRVLQIKRlkwkfrgneridvdgvpvQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTarssssssismsssssgCSSSVMEWASMeeselspgpngfsLLVYIWKK
Low Complexity Region (SEG)
MSQLHSNSSFTACFFPTTTTKNSDHHpsdpptpppppapISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGnsspisfcsnssfshaafsfhLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARssssssismsssssgcsssVMEWASMEESELSPGPNGFSLLVYIWKK
Disordered region (IsUnstruct)
*********************************************LSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGS***PQSGFYIAVVVDGEMSLLVGDCIKEAYA**************ALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDT*****************************************************************************FSLLVYIW**
Disordered Region (DISOPRED)
*************FFP*T****************************STCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDY*********************HLHIKPLIFWKKRGS*********KASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYA**********QAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFED****************************************************************************NGFSLLVYIWKK
Disordered Region (DISEMBL)
********SFTACFFPTT*****************PPAPISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYA************PQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRK***************************************PGPNGFSLLVYIWKK
Disordered Region (DISPRO)
******************************************KPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPF********S*********AAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTV*******************FGMS***W**M*******************************************PNGFSLLVYIWKK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQLHSNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEWASMEESELSPGPNGFSLLVYIWKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
225430388	371	PREDICTED: uncharacterized protein LOC10	0.945	0.973	0.577	1e-100
147766699	372	hypothetical protein VITISV_001515 [Viti	0.945	0.970	0.570	1e-99
255548794	336	conserved hypothetical protein [Ricinus	0.769	0.875	0.611	1e-95
15238921	389	uncharacterized protein [Arabidopsis tha	0.934	0.917	0.556	1e-85
297811213	388	hypothetical protein ARALYDRAFT_909057 [	0.861	0.847	0.579	1e-84
224141939	240	predicted protein [Populus trichocarpa]	0.617	0.983	0.673	2e-84
357466061	346	hypothetical protein MTR_3g106250 [Medic	0.890	0.982	0.515	8e-84
449442152	300	PREDICTED: uncharacterized protein LOC10	0.782	0.996	0.502	5e-78
449499326	300	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.782	0.996	0.5	2e-77
224089334	311	predicted protein [Populus trichocarpa]	0.811	0.996	0.506	1e-76

>gi|225430388|ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262872 [Vitis vinifera]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/383 (57%), Positives = 270/383 (70%), Gaps = 22/383 (5%)

Query: 5   HSNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSM 64
           H +S F +CF P +    +     D   PP  PA  SG PNL+TC+Y+T LG+F+LTWS 
Sbjct: 4   HHSSPFPSCFRPPSAPAAAAAAAVDHLRPPEAPAG-SGNPNLATCVYHTDLGIFTLTWSR 62

Query: 65  TLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITT 124
             FG SLHL  HP    N SP+S  +  S S  AF  HLHIKP +FWKK GSKKL V   
Sbjct: 63  NFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAF--HLHIKPFVFWKKYGSKKLHVAGA 120

Query: 125 NKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPER 184
               ++I++FWDL++AKFGS PEPQ GFY+AVV DGEM LLVGD  KEAY KT+A+K ER
Sbjct: 121 -PGGRDIRVFWDLTRAKFGSWPEPQHGFYVAVVADGEMILLVGDSEKEAYNKTRAKKAER 179

Query: 185 SQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRL 244
           +Q    LVLRREHVFGNKVYTT+A FGGKTR++SIDCS  +D RL FSVD  RVLQIKRL
Sbjct: 180 TQV---LVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDDPRLSFSVDRKRVLQIKRL 236

Query: 245 KWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDT------VDN 298
           KWKFRGNE+I+VDG+P+Q+SWDVYNWLFDD   +      HAVFMF+FE         + 
Sbjct: 237 KWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMES------HAVFMFKFERVGFEEEDEEL 290

Query: 299 EEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEW 358
           +++Q+ + +    +   FGM+GIE +KM+KSL++T RSSSSSS+S +SS    SSSVMEW
Sbjct: 291 QQQQQHLNEKNGMALCGFGMNGIERKKMKKSLLKTTRSSSSSSLSSASSGC--SSSVMEW 348

Query: 359 ASMEESELSPGPNGFSLLVYIWK 381
           AS EE EL   P+GFSLLVY WK
Sbjct: 349 ASTEEMELK-SPSGFSLLVYAWK 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147766699|emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 219/384 (57%), Positives = 268/384 (69%), Gaps = 23/384 (5%)

Query: 5   HSNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSM 64
           H +S F +CF P +    +     D   PP  PA  SG PNL+TC+Y+T LG+F+LTWS 
Sbjct: 4   HHSSPFPSCFRPPSAPAAAAAAAVDHLRPPEAPAG-SGNPNLATCVYHTDLGIFTLTWSR 62

Query: 65  TLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITT 124
             FG SLHL  HP    N SP+S  +  S S  AF  HLHIKP +FWKK GSKKL V   
Sbjct: 63  NFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAF--HLHIKPFVFWKKYGSKKLHVAGA 120

Query: 125 NKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPER 184
               ++I++FWDL++AKFGS PEPQ GFY+ VV DGEM LLVGD  KEAY KT+A+K ER
Sbjct: 121 -PGGRDIRVFWDLTRAKFGSXPEPQHGFYVXVVADGEMILLVGDSEKEAYNKTRAKKAER 179

Query: 185 SQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRL 244
           +Q    LVLRREHVFGNKVYTT+A FGGKTR++SIDCS  +D RL FSVD  RVLQIKRL
Sbjct: 180 TQV---LVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDDPRLSFSVDRKRVLQIKRL 236

Query: 245 KWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDT-------VD 297
           KWKFRGNE+I+VDG+P+Q+SWDVYNWLFDD   +      HAVFMF+FE           
Sbjct: 237 KWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMES------HAVFMFKFERVGFEEEDEEL 290

Query: 298 NEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVME 357
            +++Q+ + +    +   FGM+GIE +KM+KSL++T RSSSSSS+S +SS    SSSVME
Sbjct: 291 QQQQQQHLNEKNGMALCGFGMNGIERKKMKKSLLKTTRSSSSSSLSSASSGC--SSSVME 348

Query: 358 WASMEESELSPGPNGFSLLVYIWK 381
           WAS EE +L   P+GFSLLVY WK
Sbjct: 349 WASTEEMDLK-SPSGFSLLVYAWK 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548794|ref|XP_002515453.1| conserved hypothetical protein [Ricinus communis] gi|223545397|gb|EEF46902.1| conserved hypothetical protein [Ricinus communis]

 Score =  356 bits (913), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 200/327 (61%), Positives = 237/327 (72%), Gaps = 33/327 (10%)

Query: 77  PFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVI------TTNKASKN 130
           P D    SP S     S S    SFHL IKP IFWKK GSKKL +I      T+  ++  
Sbjct: 22  PIDSATCSPYSLSHTPSLS--TLSFHLDIKPYIFWKKHGSKKLQIINHQDYHTSTASTPA 79

Query: 131 IQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQA 190
           IQ+FWDLS+AKFGSGPEPQSGFYIAVVV+ E+ LLVGD  K+A+AKT+A+K ER+Q    
Sbjct: 80  IQIFWDLSRAKFGSGPEPQSGFYIAVVVEREIVLLVGDSTKQAFAKTRARKQERNQV--- 136

Query: 191 LVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRG 250
           LVLRREHV+GN+V+TTKA+FGGK RD+SIDC+ + DARL FSVDN RVL IK+LKWKFRG
Sbjct: 137 LVLRREHVYGNRVFTTKARFGGKNRDISIDCTVNGDARLSFSVDNKRVLHIKQLKWKFRG 196

Query: 251 NERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDT--------------V 296
           NE+I+VDGVP+Q+SWDVYNWLF+D        NGHAVFMFRFE T               
Sbjct: 197 NEKIEVDGVPIQVSWDVYNWLFEDI------NNGHAVFMFRFESTDIEDDQEQEQEEECA 250

Query: 297 DNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTAR-SSSSSSISMSSSSSGCSSSV 355
             ++E+  +   QQ S +NFGMSGIEWR+MR+SLMRT R SSSSS    S+SS G SSS+
Sbjct: 251 GVQDEKNGVVPWQQVSFNNFGMSGIEWRRMRRSLMRTGRSSSSSSISMSSASSGGGSSSI 310

Query: 356 MEWASMEESELSPGPNGFSLLVYIWKK 382
           MEWAS EE+ELS  PNGFSLLVY W+K
Sbjct: 311 MEWASTEENELS-APNGFSLLVYAWRK 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238921|ref|NP_196661.1| uncharacterized protein [Arabidopsis thaliana] gi|8979734|emb|CAB96855.1| putative protein [Arabidopsis thaliana] gi|16323145|gb|AAL15307.1| AT5g11000/T30N20_270 [Arabidopsis thaliana] gi|21436003|gb|AAM51579.1| AT5g11000/T30N20_270 [Arabidopsis thaliana] gi|21554751|gb|AAM63680.1| unknown [Arabidopsis thaliana] gi|332004236|gb|AED91619.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  323 bits (827), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 221/397 (55%), Positives = 269/397 (67%), Gaps = 40/397 (10%)

Query: 16  PTTTTKNSDH-HPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSMT-LFGHSLHL 73
           P+     +DH HP   P    P    SG PNL+TCLY T  G+F LTWS T L GHS++L
Sbjct: 3   PSWLRPTADHNHPPPQPPSQSPSPLSSGDPNLTTCLYQTDHGVFYLTWSRTFLGGHSVNL 62

Query: 74  DHHPFDYGN-SSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQ 132
             H  DY N SSP+SF S      +A SFHL++  L FWKKRGS+ +        S  IQ
Sbjct: 63  FLHSQDYYNHSSPLSFSSADLSLSSAVSFHLNLNTLAFWKKRGSRFV--------SPKIQ 114

Query: 133 LFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALV 192
           +FWDLSKAKF SG EP+SGFYIAVVVDGEM LLVGD +KEAYA+ K+ KP  +  PQAL+
Sbjct: 115 VFWDLSKAKFDSGSEPRSGFYIAVVVDGEMGLLVGDSVKEAYARAKSAKPPTN--PQALL 172

Query: 193 LRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNE 252
           LR+EHVFG +V+TTKA+FGGK R++SIDC    DA+LCFSVD+ +VLQIKRL+WKFRGNE
Sbjct: 173 LRKEHVFGARVFTTKARFGGKNREISIDCRVDEDAKLCFSVDSKQVLQIKRLRWKFRGNE 232

Query: 253 RIDVDGVPVQISWDVYNWLFDDFKS-NKNDGNGHAVFMFRFE---------DTVDNEEEQ 302
           ++++DGV VQISWDVYNWLF    S +   G GHAVFMFRFE         +T   EEE 
Sbjct: 233 KVEIDGVHVQISWDVYNWLFQSKSSGDGGGGGGHAVFMFRFESDPEAEEVCETKRKEEED 292

Query: 303 EP------MWQLQQSSCSNFGMSGI-EWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSV 355
           E       +W+ ++   ++FG+ GI EWRKMRK  +++ RSSSSSSISMSS+SS CSSSV
Sbjct: 293 EKNRNGIVLWKPKKQCGNSFGIKGIVEWRKMRKRFVKSKRSSSSSSISMSSASSACSSSV 352

Query: 356 MEWA-SMEESEL---------SPGPNGFSLLVYIWKK 382
           MEWA S +E+E          S    GFSLLVY W K
Sbjct: 353 MEWASSADEAEYGGGGCSGSGSGNGLGFSLLVYAWIK 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811213|ref|XP_002873490.1| hypothetical protein ARALYDRAFT_909057 [Arabidopsis lyrata subsp. lyrata] gi|297319327|gb|EFH49749.1| hypothetical protein ARALYDRAFT_909057 [Arabidopsis lyrata subsp. lyrata]

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 215/371 (57%), Positives = 258/371 (69%), Gaps = 42/371 (11%)

Query: 42  GKPNLSTCLYNTHLGLFSLTWSMT-LFGHSLHLDHHPFDYGN-SSPISFCSNSSFSHAAF 99
           G PNL+TCLY T  G+F LTWS T L GHS++L  H  DY N SSP+SF S      +A 
Sbjct: 30  GDPNLTTCLYQTDHGVFYLTWSRTFLGGHSVNLFLHSQDYYNHSSPLSFSSADLSLSSAV 89

Query: 100 SFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVD 159
           SFHL++  L FWKKRGS+ +S          IQ+FWDLSKAKF SG EP+SGFYIAVVVD
Sbjct: 90  SFHLNLNTLAFWKKRGSRFVS--------PKIQVFWDLSKAKFDSGSEPRSGFYIAVVVD 141

Query: 160 GEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSI 219
           GEM LLVGD +KEAYA+ K+ KP  +  PQAL+LR+EHVFG +V+TTKA+FGGK R++SI
Sbjct: 142 GEMGLLVGDSVKEAYARAKSAKPPTN--PQALLLRKEHVFGARVFTTKARFGGKNREISI 199

Query: 220 DCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
           DC    DA+LCFSVD+ +VLQIKRL+WKFRGNE++++DGV VQISWDVYNWLF    S  
Sbjct: 200 DCRVDEDAKLCFSVDSKQVLQIKRLRWKFRGNEKVEIDGVQVQISWDVYNWLFQSKNSGD 259

Query: 280 NDGNG-HAVFMFRFE------DTVDN---EEEQEP------MWQLQQSSCSN-FGMSGI- 321
             G G HAVFMFRFE      +  +    EEE E       +W+ +Q  C N FG+ GI 
Sbjct: 260 GGGGGGHAVFMFRFESDPEAEEVCETKRKEEEDEKNRNGIVLWKPKQ--CGNSFGIKGIV 317

Query: 322 EWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEWA-SMEESEL---------SPGPN 371
           EWRKMRK  +++ RSSSSSSISMSS+SS CSSSVMEWA S +E+E          S    
Sbjct: 318 EWRKMRKRFVKSKRSSSSSSISMSSASSACSSSVMEWASSADEAEYGGGGSSGSGSGNGL 377

Query: 372 GFSLLVYIWKK 382
           GFSLLVY W K
Sbjct: 378 GFSLLVYAWIK 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141939|ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|222865752|gb|EEF02883.1| predicted protein [Populus trichocarpa]

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 169/251 (67%), Positives = 194/251 (77%), Gaps = 15/251 (5%)

Query: 45  NLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNS--SPISFCSNSSFSHAAFSFH 102
           NL+TCLY T LGLFSLTWS +L GHSLHL  HP D   S  SP+S  +  S S    SFH
Sbjct: 1   NLTTCLYQTDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLS--TISFH 58

Query: 103 LHIKPLIFWKKRGSKKLSVITT--NKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDG 160
           L+IKP +FWK+ GSKKL VI    +  +  IQ+FWDLS+A+FGSGPEPQS FYIAVVV+ 
Sbjct: 59  LNIKPFLFWKRHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEPQSRFYIAVVVER 118

Query: 161 EMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSID 220
           E+ L+VGD  KEA+AKTKA K ER   PQ LVLRREHVFGN+VYTT+A+FGG+ R +SID
Sbjct: 119 EVVLVVGDLTKEAFAKTKALKQER---PQVLVLRREHVFGNRVYTTRARFGGRNRVISID 175

Query: 221 CSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKN 280
           CS +NDARLCFSVDN RVLQIKRLKWKFRGNERI+VDGVP+Q+SWDVYNWLFD       
Sbjct: 176 CSVNNDARLCFSVDNKRVLQIKRLKWKFRGNERIEVDGVPIQVSWDVYNWLFDGI----- 230

Query: 281 DGNGHAVFMFR 291
             N HAVFMFR
Sbjct: 231 -NNDHAVFMFR 240

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466061|ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago truncatula] gi|355492363|gb|AES73566.1| hypothetical protein MTR_3g106250 [Medicago truncatula]

 Score =  317 bits (811), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 197/382 (51%), Positives = 258/382 (67%), Gaps = 42/382 (10%)

Query: 6   SNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSLTWSMT 65
           S+S F +CF P+ TT ++ + P  PP+PP      S  PNL+T LY +++GL SLTWS +
Sbjct: 2   SSSPFPSCFRPSPTTDDNRNSPPPPPSPPH-----STNPNLTTYLYQSNVGLVSLTWSRS 56

Query: 66  LFGHSLH--LDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLSVIT 123
           + G SLH  L HHPFD            ++ S ++ SFHLHIKP IFWKK G+KKLS   
Sbjct: 57  ILGRSLHVQLHHHPFD---------SPPTNPSSSSSSFHLHIKPFIFWKKHGTKKLS--- 104

Query: 124 TNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPE 183
                 N  LFW+LSKAKFGSGPEP SGFY AVVVD EM+LLVGD  K+AYAK+K++  E
Sbjct: 105 -----SNTHLFWNLSKAKFGSGPEPDSGFYFAVVVDNEMTLLVGDSNKDAYAKSKSK--E 157

Query: 184 RSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKR 243
                Q LV++REHV+ NK+Y T+A+FGGK R++ IDC   + +RLCFSVD  +VLQIKR
Sbjct: 158 HKNNFQYLVMKREHVYANKIYNTRARFGGKMREIQIDCGGRDHSRLCFSVDGQKVLQIKR 217

Query: 244 LKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEE--- 300
           LKWKFRGNER+++DGVPVQISWDVYNWLF      K++ +GHA+FMF+FE+  ++E+   
Sbjct: 218 LKWKFRGNERVEIDGVPVQISWDVYNWLFV-----KDNSDGHAIFMFKFEEEDEDEQQRG 272

Query: 301 EQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEWAS 360
           +++ +  L      N G+  +         M  + SSSS S++ S  S G SSSV+EW+S
Sbjct: 273 KEKSLTNLLAQQNLNLGVYEL-------GKMGKSWSSSSVSMASSGGSFGASSSVLEWSS 325

Query: 361 MEESELSPGPNGFSLLVYIWKK 382
           +EE+EL   P GFSLLVY WK+
Sbjct: 326 VEENELVV-PVGFSLLVYAWKR 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442152|ref|XP_004138846.1| PREDICTED: uncharacterized protein LOC101205493 [Cucumis sativus]

 Score =  297 bits (761), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 173/344 (50%), Positives = 224/344 (65%), Gaps = 45/344 (13%)

Query: 40  ISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAF 99
           +S + NL+T LY T    FSLTWS TLF  +LHL                  S  SH+  
Sbjct: 1   MSSQSNLTTALYQTPTAAFSLTWSRTLFSRTLHL-----------------TSDRSHSCC 43

Query: 100 SFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVD 159
              LH+    FWKK GSK L        S +++LFWD S+A+FGS PEP+SGFYIA++VD
Sbjct: 44  ---LHLNSFAFWKKSGSKHLP------GSPSLRLFWDFSRARFGSAPEPRSGFYIALLVD 94

Query: 160 GEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSI 219
            +M+LLVGD +KEAYAKTKA KP+    PQ+LVL+RE V  +K+Y+TKAK GG+ RD+ I
Sbjct: 95  NQMTLLVGDLVKEAYAKTKALKPKN---PQSLVLKREQVVAHKIYSTKAKIGGRIRDIQI 151

Query: 220 DCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
           DC  ++D RLCF+ D+V+VL+IK LKWKFRGNE++DV+G+PVQISWDVYNW+F D K   
Sbjct: 152 DCGYNDDTRLCFAFDDVKVLEIKHLKWKFRGNEKVDVEGIPVQISWDVYNWVFGDEKD-- 209

Query: 280 NDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIE-WRKMRKSLMRTARSSS 338
              +GHA+FMFRF++  D+EE         ++   +F  +G+E W     S      SSS
Sbjct: 210 ---HGHAIFMFRFDE--DDEE--------LRTETPSFQRNGMEHWSINNHSRRMRMSSSS 256

Query: 339 SSSISMSSSSSGCSSSVMEWASMEESELSPGPNGFSLLVYIWKK 382
           SS    S  SS  SSSV++W ++EESEL  GP+ FSLLVY WKK
Sbjct: 257 SSLSMSSVGSSAGSSSVLDWTTVEESELGGGPSTFSLLVYAWKK 300

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499326|ref|XP_004160786.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230499 [Cucumis sativus]

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/344 (50%), Positives = 223/344 (64%), Gaps = 45/344 (13%)

Query: 40  ISGKPNLSTCLYNTHLGLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAF 99
           +S + NL+T LY T    FSLTWS TLF  +LHL                  S  SH+  
Sbjct: 1   MSSQSNLTTALYQTPTAAFSLTWSRTLFSRTLHL-----------------TSDRSHSCC 43

Query: 100 SFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVD 159
              LH+    FWK  GSK L        S +++LFWD S+A+FGS PEP+SGFYIA++VD
Sbjct: 44  ---LHLNSFAFWKNXGSKHLP------GSPSLRLFWDFSRARFGSAPEPRSGFYIALLVD 94

Query: 160 GEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSI 219
            +M+LLVGD +KEAYAKTKA KP+    PQ+LVL+RE V  +K+Y+TKAK GG+ RD+ I
Sbjct: 95  NQMTLLVGDLVKEAYAKTKALKPKN---PQSLVLKREQVVAHKIYSTKAKIGGRIRDIQI 151

Query: 220 DCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
           DC  ++D RLCF+ D+V+VL+IK LKWKFRGNE++DV+G+PVQISWDVYNW+F D K   
Sbjct: 152 DCGYNDDTRLCFAFDDVKVLEIKHLKWKFRGNEKVDVEGIPVQISWDVYNWVFGDEKD-- 209

Query: 280 NDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIE-WRKMRKSLMRTARSSS 338
              +GHA+FMFRF++  D+EE         ++   +F  +G+E W     S      SSS
Sbjct: 210 ---HGHAIFMFRFDE--DDEE--------LRTETPSFQRNGMEHWSINNHSRRMRMSSSS 256

Query: 339 SSSISMSSSSSGCSSSVMEWASMEESELSPGPNGFSLLVYIWKK 382
           SS    S  SS  SSSV++W ++EESEL  GP+ FSLLVY WKK
Sbjct: 257 SSLSMSSVGSSAGSSSVLDWTTVEESELGGGPSTFSLLVYAWKK 300

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089334|ref|XP_002308693.1| predicted protein [Populus trichocarpa] gi|222854669|gb|EEE92216.1| predicted protein [Populus trichocarpa]

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 194/383 (50%), Positives = 223/383 (58%), Gaps = 73/383 (19%)

Query: 1   MSQLHSNSSFTACFFPTTTTKNSDHHPSDPPTPPPPPAPISGKPNLSTCLYNTHLGLFSL 60
           M   HS+S F ACF P+T      HH   P  PPPP    SG  NL+TCLY T LGLFSL
Sbjct: 1   MPHHHSSSPFPACFRPSTA---DIHHLPPPTPPPPPN---SGNSNLTTCLYQTDLGLFSL 54

Query: 61  TWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSKKLS 120
           TWS    GHSLHL  HP D  NS    +CS +                            
Sbjct: 55  TWSSCFLGHSLHLHLHPIDCNNS----YCSPA---------------------------- 82

Query: 121 VITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQ 180
                     IQ+FWDLS+AKFGSG EPQSGFYIAVVV+ EM LLVGD  KEA+AKTKA 
Sbjct: 83  ---------RIQIFWDLSRAKFGSGHEPQSGFYIAVVVEREMVLLVGDLTKEAFAKTKAL 133

Query: 181 KPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCSTSNDARLCFSVDNVRVLQ 240
           K ER+Q    LVLRREHVFGN+VYTT+A+FGGK R++SIDCS +NDARLCF VDN RVLQ
Sbjct: 134 KKERAQV---LVLRREHVFGNRVYTTRARFGGKNREISIDCSVNNDARLCFCVDNKRVLQ 190

Query: 241 IKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKNDGNGHAVFMFRFEDTVDNEE 300
           IKRLKWKFRGNERI+VDGVP+Q+SWDVYNWLFDD     N  + +           +  E
Sbjct: 191 IKRLKWKFRGNERIEVDGVPIQVSWDVYNWLFDDI----NTDHAYPKEEEEVVQKQEQIE 246

Query: 301 EQEPMWQLQQSSCSNFGMSGIEWRKMRKSLMRTARSSSSSSISMSSSSSGCSSSVMEWA- 359
                 Q Q+ +  N     + W++   +                      SSSVMEWA 
Sbjct: 247 AYGCHHQQQEINEKNNNKDVVLWQQNSSTSSGG------------------SSSVMEWAS 288

Query: 360 SMEESELSPGPNGFSLLVYIWKK 382
           S EESEL  GP GFSLLVY W+K
Sbjct: 289 STEESELCGGPIGFSLLVYAWRK 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2183820	389	AT5G11000 "AT5G11000" [Arabido	0.709	0.696	0.535	2.1e-75
TAIR|locus:2182029	289	AT5G28150 [Arabidopsis thalian	0.544	0.719	0.436	8.6e-47
TAIR|locus:2114799	289	AT3G04860 [Arabidopsis thalian	0.541	0.716	0.447	2.5e-43
TAIR|locus:2059556	354	AT2G25200 "AT2G25200" [Arabido	0.455	0.491	0.518	5.7e-43
TAIR|locus:2055988	307	AT2G04220 "AT2G04220" [Arabido	0.479	0.596	0.402	1.2e-39
TAIR|locus:2135758	285	AT4G12690 "AT4G12690" [Arabido	0.539	0.722	0.366	5.1e-39
TAIR|locus:2164738	322	AT5G48270 "AT5G48270" [Arabido	0.458	0.543	0.369	1.5e-33
TAIR|locus:504955764	289	AT3G13229 "AT3G13229" [Arabido	0.439	0.581	0.375	6.1e-31
TAIR|locus:2042092	320	AT2G27770 [Arabidopsis thalian	0.481	0.575	0.376	1.3e-27
TAIR|locus:2044898	327	AT2G36470 "AT2G36470" [Arabido	0.405	0.474	0.304	1.8e-16

TAIR|locus:2183820 AT5G11000 "AT5G11000" [Arabidopsis thaliana (taxid:3702)]

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 160/299 (53%), Positives = 197/299 (65%)

Query:    41 SGKPNLSTCLYNTHLGLFSLTWSMT-LFGHSLHLDHHPFDY-GXXXXXXXXXXXXXXXXX 98
             SG PNL+TCLY T  G+F LTWS T L GHS++L  H  DY                   
Sbjct:    29 SGDPNLTTCLYQTDHGVFYLTWSRTFLGGHSVNLFLHSQDYYNHSSPLSFSSADLSLSSA 88

Query:    99 XXXXLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVV 158
                 L++  L FWKKRGS+ +S          IQ+FWDLSKAKF SG EP+SGFYIAVVV
Sbjct:    89 VSFHLNLNTLAFWKKRGSRFVS--------PKIQVFWDLSKAKFDSGSEPRSGFYIAVVV 140

Query:   159 DGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVS 218
             DGEM LLVGD +KEAYA+ K+ KP  +  PQAL+LR+EHVFG +V+TTKA+FGGK R++S
Sbjct:   141 DGEMGLLVGDSVKEAYARAKSAKPPTN--PQALLLRKEHVFGARVFTTKARFGGKNREIS 198

Query:   219 IDCSTSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSN 278
             IDC    DA+LCFSVD+ +VLQIKRL+WKFRGNE++++DGV VQISWDVYNWLF    S 
Sbjct:   199 IDCRVDEDAKLCFSVDSKQVLQIKRLRWKFRGNEKVEIDGVHVQISWDVYNWLFQSKSSG 258

Query:   279 KNDGNG-HAVFMFRFE---------DTVDNEEEQEP------MWQLQQSSCSNFGMSGI 321
                G G HAVFMFRFE         +T   EEE E       +W+ ++   ++FG+ GI
Sbjct:   259 DGGGGGGHAVFMFRFESDPEAEEVCETKRKEEEDEKNRNGIVLWKPKKQCGNSFGIKGI 317

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2182029 AT5G28150 [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
 Identities = 99/227 (43%), Positives = 130/227 (57%)

Query:   103 LHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEM 162
             + IKP +F K++GSK L        S NI +FWDLS AKFGSGPE   GFY+ VVVD EM
Sbjct:    75 VEIKPWLFTKRKGSKSLEAY-----SCNIDVFWDLSSAKFGSGPEALGGFYVGVVVDKEM 129

Query:   163 SLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKF--GGKTRDVSID 220
              LL+GD  KEA+ KT A  P  S      + ++EHVFG +V+ TKA+    GK  D+ I+
Sbjct:   130 VLLLGDMKKEAFKKTNAS-P--SSLGAVFIAKKEHVFGKRVFATKAQLFADGKFHDLLIE 186

Query:   221 CSTS-NDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
             C T+  D  L   VD   +LQ+KRLKWKFRGN+ I V+ + V++ WDV++WLF       
Sbjct:   187 CDTNVTDPCLVVRVDGKTLLQVKRLKWKFRGNDTIVVNKMTVEVLWDVHSWLFG------ 240

Query:   280 NDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGI--EWR 324
                 G+AVFMFR   + +             S   +FG S I   W+
Sbjct:   241 LPTTGNAVFMFRTCQSTEKSLSFSQDVTTTNSKSHSFGFSLILYAWK 287

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2114799 AT3G04860 [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 102/228 (44%), Positives = 137/228 (60%)

Query:   103 LHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEM 162
             + IKP +F K++GSK L     N     I +FWDLS AKFGS PEP  GFY+ VVVD EM
Sbjct:    75 VEIKPWLFTKRKGSKTLEAYACN-----IDVFWDLSSAKFGSSPEPLGGFYVGVVVDKEM 129

Query:   163 SLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGG--KTRDVSID 220
              LL+GD  KEA+ KT A  P  S      + ++EHVFG + + TKA+F G  KT D+ I+
Sbjct:   130 VLLLGDMKKEAFKKTNAA-PSSSLGA-VFIAKKEHVFGKRTFATKAQFSGDGKTHDLVIE 187

Query:   221 CSTS-NDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
             C TS +D  L   VD   ++Q++RL WKFRGN+ I V+ + V++ WDV++W F    S+ 
Sbjct:   188 CDTSLSDPCLIVRVDGKILMQVQRLHWKFRGNDTIIVNRISVEVLWDVHSWFFG-LPSSP 246

Query:   280 NDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCS-NFGMSGI--EWR 324
                 G+AVFMFR   T  + E+     Q+  SS S +FG S I   W+
Sbjct:   247 ----GNAVFMFR---TCQSVEKTWSFTQVPTSSKSQSFGFSLILYAWK 287

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059556 AT2G25200 "AT2G25200" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 100/193 (51%), Positives = 128/193 (66%)

Query:   103 LHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEM 162
             L IKPL FW+K GSKKLS         +I++ WDL+ AKFGSGP+P+SGFY+AV V GE+
Sbjct:   104 LEIKPLTFWRKNGSKKLS------RKPDIRVVWDLTHAKFGSGPDPESGFYVAVFVSGEV 157

Query:   163 SLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCS 222
              LLVG          K Q+P R    Q LV ++E++FGN+VY+TK    GK R++SID  
Sbjct:   158 GLLVGG------GNLK-QRPRR----QILVSKKENLFGNRVYSTKIMIQGKLREISIDVK 206

Query:   223 TSND-ARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKND 281
               ND A L FSVD+  VL+I +L+WKFRGN +I +DGV +QISWDV+NWLF      K D
Sbjct:   207 VVNDDASLRFSVDDKSVLKISQLQWKFRGNTKIVIDGVTIQISWDVFNWLFGGKDKVKPD 266

Query:   282 GNGHAVFMFRFED 294
                 AVF+ RFE+
Sbjct:   267 -KIPAVFLLRFEN 278

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2055988 AT2G04220 "AT2G04220" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 81/201 (40%), Positives = 123/201 (61%)

Query:   105 IKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSL 164
             +KP  FW K+G K   V         ++++WD   AKF S PEP S FY+A+V + E+ L
Sbjct:    78 LKPWHFWNKKGYKSFDV-----EGNPVEVYWDFRSAKFTSSPEPSSDFYVALVSEEEVVL 132

Query:   165 LVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGG--KTRDVSIDCS 222
             LVGD  K+A+ +TK+ +P   +A  AL  ++E+VFG K +TT+AKF    K  ++ ++ S
Sbjct:   133 LVGDYKKKAFKRTKS-RPALVEA--ALFYKKENVFGKKCFTTRAKFYDRKKEHEIIVESS 189

Query:   223 TSN--DARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKN 280
             TS   +  +  S+D + ++Q+K L+WKFRGN+ + VD  PVQ+ WDVY+WLF        
Sbjct:   190 TSGPKEPEMWISIDGIVLIQVKNLQWKFRGNQTVLVDKQPVQVFWDVYDWLFS------M 243

Query:   281 DGNGHAVFMFRFEDTVDNEEE 301
              G GH +F+F+   T D++ E
Sbjct:   244 PGTGHGLFIFKPGTTEDSDME 264

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048446 "petal morphogenesis" evidence=RCA

TAIR|locus:2135758 AT4G12690 "AT4G12690" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
 Identities = 82/224 (36%), Positives = 129/224 (57%)

Query:   105 IKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSL 164
             +KP  FW K+G K   V         + ++WD   AKF  GPEP S FY+A+V + E+ L
Sbjct:    74 LKPWHFWYKKGYKSFEV-----EGNQVDVYWDFRSAKFNGGPEPSSDFYVALVSEEEVVL 128

Query:   165 LVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRD--VSIDCS 222
             L+GD  K+A+ +TK+ +P    A  AL  ++E+VFG K+++T+AKF  + R+  + ++ S
Sbjct:   129 LLGDHKKKAFKRTKS-RPSLVDA--ALFYKKENVFGKKIFSTRAKFHDRKREHEIVVESS 185

Query:   223 T-SNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNKND 281
             T + +  +  SVD + ++Q++ L+WKFRGN+ + VD  PVQ+ WDVY+WLF         
Sbjct:   186 TGAKEPEMWISVDGIVLVQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLFS------TP 239

Query:   282 GNGHAVFMFRFED-TVDNEEEQEPMWQLQQSSCSNFGMSGIEWR 324
             G GH +F+F+ E    +   E +       SS S F +    W+
Sbjct:   240 GTGHGLFIFKPESGESETSNETKNCSASSSSSSSEFCLFLYAWK 283

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2164738 AT5G48270 "AT5G48270" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
 Identities = 71/192 (36%), Positives = 116/192 (60%)

Query:   105 IKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKF-GSG-PEPQSGFYIAVVVDGEM 162
             +KP  FW KRGSK   V         +++FWDL  AK  G+G PEP S +Y+AVV D E+
Sbjct:    90 VKPWQFWSKRGSKSFDV-----EGNFVEVFWDLRSAKLAGNGSPEPVSDYYVAVVSDEEV 144

Query:   163 SLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGGKTRDVSIDCS 222
              LL+GD  ++AY +TK+ +P   +    +  ++E +FG K ++T+A+F  + ++  +   
Sbjct:   145 VLLLGDLKQKAYKRTKS-RPALVEG--FIYFKKESIFGKKTFSTRARFDEQRKEHEVVVE 201

Query:   223 TSNDA---RLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDDFKSNK 279
             +SN A    +  SVD + V+ +K L+WKFRGN+ + VD  PV + +DV++WLF   ++  
Sbjct:   202 SSNGAAEPEMWISVDGIVVVNVKNLQWKFRGNQMVMVDRTPVMVYYDVHDWLFASSETAA 261

Query:   280 NDGNGHAVFMFR 291
             + G    +F+F+
Sbjct:   262 SSG----LFLFK 269

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:504955764 AT3G13229 "AT3G13229" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 71/189 (37%), Positives = 109/189 (57%)

Query:   110 FWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDC 169
             FW K+G K L    T      + ++WD  +AKF + PEP SGFY+++V      L +GD 
Sbjct:    63 FWAKKGLKSLEANGTR-----VDVYWDFRQAKFSNFPEPSSGFYVSLVSQNATVLTIGDL 117

Query:   170 IKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFGG----KTRDVSIDCSTS- 224
               EA  +TK + P  ++A  ALV ++EHV G +V+ T+  FGG    +  +V I+ S S 
Sbjct:   118 RNEALKRTK-KNPSATEA--ALVSKQEHVHGKRVFYTRTAFGGGESRRENEVVIETSLSG 174

Query:   225 -NDARLCFSVDNVRVLQIKRLKWKFRGNERIDV-DGVPVQISWDVYNWLFDDFKSNKNDG 282
              +D  +  +VD V  ++I  L W+FRGNE + V DGV ++I WDV++WLF+        G
Sbjct:   175 PSDPEMWITVDGVPAIRIMNLNWRFRGNEVVTVSDGVSLEIFWDVHDWLFEP------SG 228

Query:   283 NGHAVFMFR 291
             +   +F+F+
Sbjct:   229 SSSGLFVFK 237

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2042092 AT2G27770 [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 79/210 (37%), Positives = 118/210 (56%)

Query:   103 LHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGS---GPEPQSGFYIAVVVD 159
             L+     F KK+G+K +     +   K I++FWDLS AK+ S   GPEP +GFY+ V+VD
Sbjct:    94 LNTSSRFFRKKKGNKSVD----SDLGK-IEVFWDLSSAKYDSNLCGPEPINGFYVIVLVD 148

Query:   160 GEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKV-YTTKAKF--GGKTRD 216
             G+M LL+GD  +E   K K    +      +LV R+EH  GN   Y+TK +F   G + +
Sbjct:   149 GQMGLLLGDSSEETLRK-KGFSGDIG-FDFSLVSRQEHFTGNNTFYSTKVRFVETGDSHE 206

Query:   217 VSIDCSTSNDAR--------LCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVY 268
             + I C+   +          L   +D   V+++KRL+W FRGN+ I +DG+ V + WDV+
Sbjct:   207 IVIRCNKETEGLKQSNHYPVLSVCIDKKTVIKVKRLQWNFRGNQTIFLDGLLVDLMWDVH 266

Query:   269 NWLFDDFKSNKNDGNGHAVFMFRFEDTVDN 298
             +W F    SN+    G AVFMFR  + +D+
Sbjct:   267 DWFF----SNQG-ACGRAVFMFRTRNGLDS 291

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2044898 AT2G36470 "AT2G36470" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 56/184 (30%), Positives = 94/184 (51%)

Query:   112 KKRGSKKLSVITTNKASKNIQLFWDLSKAKF-GSGPEPQSGFYIAVVVDGEMSLLVGDCI 170
             K +GS+KL   T++  S N ++ WDLS+A++  +GPEP   F++ VVV+ E++L VGD  
Sbjct:    83 KPKGSRKL---TSSSGSLNAEILWDLSEAEYENNGPEPIRRFFVVVVVNSEITLGVGDVD 139

Query:   171 KEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKFG--GKTRDVSIDCS------ 222
              E          + S +    V + E   G    TTKA+F   G+  ++ I C       
Sbjct:   140 HER---------DTSSSSSWRVSKTERFSGTCWLTTKAQFSDVGRKHEIQIQCGGGGGGG 190

Query:   223 --------TSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWLFDD 274
                       +   +   VD  +V  +K+LKW FRGN+ +  DG+ + + WD+++W + +
Sbjct:   191 GEEGYLWKVKSPETMSVYVDKRKVFSVKKLKWNFRGNQTMFFDGMLIDMMWDLHDWFYKE 250

Query:   275 FKSN 278
               S+
Sbjct:   251 TLSS 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      382       329   0.00089  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  268 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.19u 0.09s 24.28t   Elapsed:  00:00:02
  Total cpu time:  24.19u 0.09s 24.28t   Elapsed:  00:00:02
  Start:  Thu May  9 19:16:16 2013   End:  Thu May  9 19:16:18 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000165 "MAPK cascade" evidence=RCA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032713001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (357 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
pfam05910	271	pfam05910, DUF868, Plant protein of unknown functi	4e-93

>gnl|CDD|218805 pfam05910, DUF868, Plant protein of unknown function (DUF868)

 Score =  279 bits (716), Expect = 4e-93
 Identities = 130/351 (37%), Positives = 169/351 (48%), Gaps = 88/351 (25%)

Query: 40  ISGKPNLSTCLYNTHL----GLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFS 95
                +  TC+Y   L     L ++TWS  L GH L +     D  NSS           
Sbjct: 1   SPSAQSAVTCVYRARLSGKPLLVTVTWSKNLLGHGLSVAVDSSDGNNSS----------- 49

Query: 96  HAAFSFHLHIKPLIFWKKRGSKKLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIA 155
                  L IKP +FWKK+GSK   V         I +FWDLS AKF SGPEP SGFY+A
Sbjct: 50  ----LCKLDIKPWLFWKKKGSKSFEV-----DGGKIDVFWDLSSAKFDSGPEPVSGFYVA 100

Query: 156 VVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKF--GGK 213
           VVVDGE+ LL+GD  KEA+ +TK+       A  ALV R+EHVFG +V++TKA+F   GK
Sbjct: 101 VVVDGEVVLLLGDLKKEAFKRTKSG---PPAADAALVSRKEHVFGKRVFSTKARFSDQGK 157

Query: 214 TRDVSIDCSTSNDA--RLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWL 271
             ++ I+C T       L  SVD  +V+Q+KRL+WKFRGN+ + VDG+PV++ WDV++WL
Sbjct: 158 EHEIVIECDTEGLKDPELWVSVDGKKVVQVKRLQWKFRGNQTVFVDGLPVEVMWDVHDWL 217

Query: 272 FDDFKSNKNDGNGHAVFMFRFEDTVDNEEEQEPMWQLQQSSCSNFGMSGIEWRKMRKSLM 331
           F          +G AVFMFR                                        
Sbjct: 218 F------GPSSSGSAVFMFRTR-------------------------------------- 233

Query: 332 RTARSSSSSSISMSSSSSGCSSSVMEWASMEESELSPGPNGFSLLVYIWKK 382
                S   S  +   +S         AS  ES  S   +GFSL++Y WK 
Sbjct: 234 -----SGLESRWIEEDAS--------SASQVESSGSSQKHGFSLILYAWKL 271

This family consists of several hypothetical proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. Length = 271

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
PF05910	274	DUF868: Plant protein of unknown function (DUF868)	100.0
PF05910	274	DUF868: Plant protein of unknown function (DUF868)	91.13
cd00110	151	LamG Laminin G domain; Laminin G-like domains are	90.28

>PF05910 DUF868: Plant protein of unknown function (DUF868); InterPro: IPR008586 This family consists of several hypothetical proteins from plants

Probab=100.00  E-value=6.5e-108  Score=783.88  Aligned_cols=226  Identities=53%  Similarity=0.947  Sum_probs=209.9

Q ss_pred             CCCceEEEEEEeee----ceEEEEccccccCCeeEEEeecCCCCCCCCCcccCCCCCCcccceeeeecccceeeeccccc
Q 016824           42 GKPNLSTCLYNTHL----GLFSLTWSMTLFGHSLHLDHHPFDYGNSSPISFCSNSSFSHAAFSFHLHIKPLIFWKKRGSK  117 (382)
Q Consensus        42 ~~qn~vTcvY~t~L----~litvTWsk~l~g~sLsv~v~~~~~~~~sp~~~~~~~~~~~~t~s~k~~ikPw~FwkKkGSK  117 (382)
                      ++||+|||||||+|    ++||||||||+|||+|+|.|++.+++               ..++||+++|||+||||||||
T Consensus         2 s~q~~vT~vY~~~l~g~~~litvTWsk~~~g~~Lsv~v~~~~~~---------------~~~~~k~~~~p~~fwkkkGsK   66 (274)
T PF05910_consen    2 SPQNSVTCVYQTKLSGKPRLITVTWSKNLLGQSLSVSVDDASGS---------------SSSSCKVDLKPWLFWKKKGSK   66 (274)
T ss_pred             CCCceEEEEEEEEecCCceEEEEEEeCCccCCeEEEEEeCcccc---------------ccccccccCccceeEecCCcc
Confidence            58999999999999    69999999999999999999975431               246899999999999999999


Q ss_pred             eeEeeeccCCCCcEEEEecCCCcccCCCCccCcccEEEEEECceEEEEecCcchHHHHHhhcCCCCCCCCCeeeEEeeEE
Q 016824          118 KLSVITTNKASKNIQLFWDLSKAKFGSGPEPQSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREH  197 (382)
Q Consensus       118 sf~~~~~~~~~~~V~v~WDLs~Akf~sgPEP~sgfYVAVV~d~EvvLlLGDl~kea~~ktk~~~~~~~~~~a~LvsRREh  197 (382)
                      +|+     +++++|+|||||++|||+++|||++|||||||+|+|||||||||++|||+|++++|++.   +++||+||||
T Consensus        67 sf~-----~~~~~v~v~WDLs~Akf~s~PEP~sgfYVavv~d~EvvLllGDl~~ea~~rt~~~~~~~---~~~LvsRrEh  138 (274)
T PF05910_consen   67 SFE-----VDGPKVDVFWDLSSAKFGSGPEPVSGFYVAVVVDGEVVLLLGDLKKEAYKRTKSRPSPS---EAVLVSRREH  138 (274)
T ss_pred             ccc-----cCCceEEEEeCccccccCCCCCCCCccEEEEEECCEEEEEecCchhHHHhhccCCCCcc---ceeEEEEEEE
Confidence            995     46899999999999999999999999999999999999999999999999999998765   9999999999


Q ss_pred             EeeeceEEeeEEE--CCccceEEEEeC----CCCCccEEEEEcCEEEEEEeecccccccceeEEeCCcEEEEEEEccccc
Q 016824          198 VFGNKVYTTKAKF--GGKTRDVSIDCS----TSNDARLCFSVDNVRVLQIKRLKWKFRGNERIDVDGVPVQISWDVYNWL  271 (382)
Q Consensus       198 V~G~~~y~TkA~F--~G~~HeI~Iec~----~~~d~~L~VsVDgk~vlqVkRL~WkFRGNetI~vdG~~V~V~WDVHdWl  271 (382)
                      |||++.|+|||||  .|++|||+|||.    +..||+|||+||||+|||||||||||||||||+|||++|||||||||||
T Consensus       139 v~G~~~~~Tka~F~e~G~~HeI~Iec~~~~~g~~dp~l~V~VDgk~v~~VkrL~WkFRGNqti~vdg~~V~V~WDVHdWl  218 (274)
T PF05910_consen  139 VFGKKVYSTKARFCEGGKEHEISIECGGETGGPKDPELWVSVDGKKVVQVKRLRWKFRGNQTIFVDGLPVQVFWDVHDWL  218 (274)
T ss_pred             EEEEEEEeeEEEEcCCCcEEEEEEEEeccCCCCCCceEEEEECCEEEEEEEEeeecccCceEEEECCeEEEEEEEhhhhh
Confidence            9999999999999  799999999992    3468999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCcceEEEEEecCC
Q 016824          272 FDDFKSNKNDGNGHAVFMFRFEDT  295 (382)
Q Consensus       272 F~~~~s~~~~~~g~AVFmFr~~~~  295 (382)
                      |++++     +.||||||||++++
T Consensus       219 F~~~~-----~~~~AVFmFr~~~~  237 (274)
T PF05910_consen  219 FNNGP-----GSGHAVFMFRPRSG  237 (274)
T ss_pred             hccCC-----CCCceEEEEEecCC
Confidence            98542     23699999999975

The function of this family is unknown.

>PF05910 DUF868: Plant protein of unknown function (DUF868); InterPro: IPR008586 This family consists of several hypothetical proteins from plants

Probab=91.13  E-value=0.35  Score=48.05  Aligned_cols=70  Identities=33%  Similarity=0.590  Sum_probs=47.1

Q ss_pred             eEEeeEEECCccceEEEE-eCCCCCccEEEEEcCEE-----E--EEEe-ecccccccceeEEeCCcEEEEEEEccccccc
Q 016824          203 VYTTKAKFGGKTRDVSID-CSTSNDARLCFSVDNVR-----V--LQIK-RLKWKFRGNERIDVDGVPVQISWDVYNWLFD  273 (382)
Q Consensus       203 ~y~TkA~F~G~~HeI~Ie-c~~~~d~~L~VsVDgk~-----v--lqVk-RL~WkFRGNetI~vdG~~V~V~WDVHdWlF~  273 (382)
                      +|.|+  +.|+..-|.|- |...-...|.|.||.-.     .  +.+| .|=||=||+.++.++|-.|+|+||+=.==|+
T Consensus        10 vY~~~--l~g~~~litvTWsk~~~g~~Lsv~v~~~~~~~~~~~k~~~~p~~fwkkkGsKsf~~~~~~v~v~WDLs~Akf~   87 (274)
T PF05910_consen   10 VYQTK--LSGKPRLITVTWSKNLLGQSLSVSVDDASGSSSSSCKVDLKPWLFWKKKGSKSFEVDGPKVDVFWDLSSAKFG   87 (274)
T ss_pred             EEEEE--ecCCceEEEEEEeCCccCCeEEEEEeCccccccccccccCccceeEecCCccccccCCceEEEEeCccccccC
Confidence            34444  36666666665 44433444777776544     1  1111 4558899999999999999999999887775


Q ss_pred             C
Q 016824          274 D  274 (382)
Q Consensus       274 ~  274 (382)
                      .
T Consensus        88 s   88 (274)
T PF05910_consen   88 S   88 (274)
T ss_pred             C
Confidence            4

The function of this family is unknown.

>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans

Probab=90.28  E-value=2.2  Score=35.55  Aligned_cols=80  Identities=20%  Similarity=0.251  Sum_probs=55.6

Q ss_pred             CcccEEEEEECceEEEEecCcchHHHHHhhcCCCCCCCCCeeeEEeeEEEeeeceEEeeEEE-CCccceEEEEeCCCCCc
Q 016824          149 QSGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKF-GGKTRDVSIDCSTSNDA  227 (382)
Q Consensus       149 ~sgfYVAVV~d~EvvLlLGDl~kea~~ktk~~~~~~~~~~a~LvsRREhV~G~~~y~TkA~F-~G~~HeI~Iec~~~~d~  227 (382)
                      ...|+.+-+.++.+.+.+.....                 .+            .+.+..++ .|+.|.|.|+...   .
T Consensus        45 ~~~~~~l~l~~g~l~~~~~~g~~-----------------~~------------~~~~~~~v~dg~Wh~v~i~~~~---~   92 (151)
T cd00110          45 GGDFLALELEDGRLVLRYDLGSG-----------------SL------------VLSSKTPLNDGQWHSVSVERNG---R   92 (151)
T ss_pred             CCCEEEEEEECCEEEEEEcCCcc-----------------cE------------EEEccCccCCCCEEEEEEEECC---C
Confidence            55676666779999988877411                 01            11222246 5999999999965   4


Q ss_pred             cEEEEEcCEEEEEEeeccc--ccccceeEEeCCcE
Q 016824          228 RLCFSVDNVRVLQIKRLKW--KFRGNERIDVDGVP  260 (382)
Q Consensus       228 ~L~VsVDgk~vlqVkRL~W--kFRGNetI~vdG~~  260 (382)
                      .+.+.|||+.+++...-..  .+..+..|+|+|.|
T Consensus        93 ~~~l~VD~~~~~~~~~~~~~~~~~~~~~~~iGg~~  127 (151)
T cd00110          93 SVTLSVDGERVVESGSPGGSALLNLDGPLYLGGLP  127 (151)
T ss_pred             EEEEEECCccEEeeeCCCCceeecCCCCeEEcCCC
Confidence            5999999997777655444  36777788888875

Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	382
d1d2sa_	170	Sex hormone-binding globulin {Human (Homo sapiens)	87.37
d1h30a1	191	Growth-arrest-specific protein Gas6 {Human (Homo s	85.54

>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Sex hormone-binding globulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.37  E-value=1.1  Score=36.15  Aligned_cols=77  Identities=14%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             cccEEEEEECceEEEEecCcchHHHHHhhcCCCCCCCCCeeeEEeeEEEeeeceEEeeEEE-CCccceEEEEeCCCCCcc
Q 016824          150 SGFYIAVVVDGEMSLLVGDCIKEAYAKTKAQKPERSQAPQALVLRREHVFGNKVYTTKAKF-GGKTRDVSIDCSTSNDAR  228 (382)
Q Consensus       150 sgfYVAVV~d~EvvLlLGDl~kea~~ktk~~~~~~~~~~a~LvsRREhV~G~~~y~TkA~F-~G~~HeI~Iec~~~~d~~  228 (382)
                      .+|+.+-+.||.+.+.+.-...                ...             ..+..++ .|+.|.|.|+...   .+
T Consensus        52 ~~fi~L~L~~G~l~~~~~~g~~----------------~~~-------------~~s~~~~~dg~WH~V~i~~~~---~~   99 (170)
T d1d2sa_          52 DDWFMLGLRDGRPEIQLHNHWA----------------QLT-------------VGAGPRLDDGRWHQVEVKMEG---DS   99 (170)
T ss_dssp             TEEEEEEEETTEEEEEEESSSC----------------EEE-------------EECSCCCCSSSCEEEEEEEET---TE
T ss_pred             CcEEEEEEECCEEEEEEeCCCc----------------ceE-------------EecccccCCCceEEEEEEEEC---CE
Confidence            4677777889999988743211                111             1122235 6999999999854   45


Q ss_pred             EEEEEcCEEEEEEeecccccccceeEEeCCcE
Q 016824          229 LCFSVDNVRVLQIKRLKWKFRGNERIDVDGVP  260 (382)
Q Consensus       229 L~VsVDgk~vlqVkRL~WkFRGNetI~vdG~~  260 (382)
                      +.+.|||..+...+-..  .--+..|+|+|+|
T Consensus       100 ~~L~VD~~~~~~~~~~~--~~~~~~lyiGG~p  129 (170)
T d1d2sa_         100 VLLEVDGEEVLRLRQVS--GHPIMRIALGGLL  129 (170)
T ss_dssp             EEEEETTEEEEEETTCC--CCCEEEEEESSCS
T ss_pred             EEEEECCeeeEeeecCC--CccCCeEEEcccc
Confidence            99999999887765443  2223347777775

>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Growth-arrest-specific protein Gas6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.54  E-value=3.8  Score=33.00  Aligned_cols=49  Identities=24%  Similarity=0.322  Sum_probs=33.8

Q ss_pred             EE-CCccceEEEEeCCCCCccEEEEEcCEEEEEEee---cccccccc--eeEEeCCcE
Q 016824          209 KF-GGKTRDVSIDCSTSNDARLCFSVDNVRVLQIKR---LKWKFRGN--ERIDVDGVP  260 (382)
Q Consensus       209 ~F-~G~~HeI~Iec~~~~d~~L~VsVDgk~vlqVkR---L~WkFRGN--etI~vdG~~  260 (382)
                      ++ .|+.|.|.|+-..   ..+.+.||++.+..+..   +.-....+  ..|+|+|+|
T Consensus       113 ~v~Dg~WH~V~v~r~~---~~~~l~VD~~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p  167 (191)
T d1h30a1         113 VINHGMWQTISVEELA---RNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIP  167 (191)
T ss_dssp             ECCSSCCEEEEEEECS---SEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCS
T ss_pred             cccCCCEEEEEEEEeC---CEEEEEECCcceEEEEccCccccccccccCceEEEEeec
Confidence            45 6999999999853   45999999998877663   22223332  237888865