Citrus Sinensis ID: 016839

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MMGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mmggqsskkkggdapspplevitdaqysADLSLYEAAcrldpdlqsfdATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKkfkdagdpfTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN
Flexible Loop (DISEMBL)
mmggqsskkkggdapsppLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLsagvevhslsFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKqfdeevelqevvdekryvrtldelkkfkdagdpFTEEFFVLFQSVYKQQVLMLERLQKRKRkldkklksmktwrmvsNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLnnadfalrEEDVVKLAIEEIRKRLEVFMETIEVLCdhadkcsrdiRRARTVILQkiikypnn
Low Complexity Region (SEG)
MMggqsskkkggDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFdeevelqevvdeKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVlmlerlqkrkrkldkklksmkTWRMVSNVLFVSTfvavlifsvvaaaiaapplvtalaGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN
Disordered region (IsUnstruct)
********************VITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKY***
Disordered Region (DISOPRED)
***********************************AACRLDPDLQSFDATIQER*******************DSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQ***************YVRTLDELKKFKDAGDPFTEE*FV***S****************************WRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWN***************MQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVIL**II*****
Disordered Region (DISEMBL)
****************PPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN
Disordered Region (DISPRO)
************************AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQE*VDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKY***
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVxxxxxxxxxxxxxxxxxxxxxLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDxxxxxxxxxxxxxxxxxxxxxxxxxxxxEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	381	2.2.26 [Sep-21-2011]
Q56XQ0	393	UPF0496 protein At2g18630	yes	no	0.986	0.956	0.609	1e-130
Q9SYZ7	374	UPF0496 protein At4g34320	no	no	0.968	0.986	0.589	1e-115
Q10QE9	388	UPF0496 protein 1 OS=Oryz	yes	no	0.910	0.894	0.581	1e-114
A2XDK8	388	UPF0496 protein 1 OS=Oryz	N/A	no	0.910	0.894	0.581	1e-114
Q8GW16	412	UPF0496 protein At5g66675	no	no	0.989	0.915	0.544	1e-111
Q9SYZ8	354	UPF0496 protein At4g34330	no	no	0.910	0.980	0.495	5e-91
Q9LVR3	408	UPF0496 protein At5g66670	no	no	0.984	0.919	0.450	2e-84
Q7XFE1	423	Putative UPF0496 protein	no	no	0.853	0.768	0.509	1e-83
Q9LVR4	398	UPF0496 protein At5g66660	no	no	1.0	0.957	0.452	2e-82
A2Z6C5	428	Putative UPF0496 protein	N/A	no	0.855	0.761	0.507	1e-81

>sp|Q56XQ0|U496I_ARATH UPF0496 protein At2g18630 OS=Arabidopsis thaliana GN=At2g18630 PE=2 SV=3

 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/382 (60%), Positives = 312/382 (81%), Gaps = 6/382 (1%)

Query: 1   MMGGQSSKKKGG---DAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSR 57
           MMGG+SSK K      +PS P+++  +++Y+  LS YE AC  DP L+SFD+ + ERT+R
Sbjct: 1   MMGGKSSKSKKNVEFGSPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNR 60

Query: 58  VIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFET 117
           VI+KL++GVE+ SLSFDSL+EVT  LL+MNQ+VVKVIL+ K+DIWNNQDLF LV  YFE+
Sbjct: 61  VINKLASGVEIKSLSFDSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFES 120

Query: 118 SIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDA 177
           + KT+DFC+ LENCL RAR SQ+IIQ AV QF+EE E +E    ++Y +TL+ELK+FK A
Sbjct: 121 TAKTMDFCSELENCLNRARRSQVIIQFAVNQFEEENEDKE---NRKYEKTLEELKRFKVA 177

Query: 178 GDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLI 237
           G+PFT+EFF LF  VYKQQV+MLE L K KRKLDK+L+++KTWR VSN++FV+ FV+VLI
Sbjct: 178 GEPFTKEFFALFDLVYKQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVLI 237

Query: 238 FSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVK 297
           FSVVAAA+AAPP+V A+AGALAVP+GSVGKWCN+LW  YEK ++GQKE++++++IG Y+ 
Sbjct: 238 FSVVAAAVAAPPVVAAIAGALAVPVGSVGKWCNTLWTKYEKVVRGQKEIITSIRIGTYIS 297

Query: 298 IMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHA 357
           + +MD+I +LV K+E++IE+LL  A+FA+ EE  V+LAI+EI+K+L+VF ETIE L +HA
Sbjct: 298 VKEMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHA 357

Query: 358 DKCSRDIRRARTVILQKIIKYP 379
            K   D+ +ARTVILQ+II+YP
Sbjct: 358 GKYCSDVTKARTVILQRIIRYP 379

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SYZ7|U496A_ARATH UPF0496 protein At4g34320 OS=Arabidopsis thaliana GN=At4g34320 PE=1 SV=1

 Score =  415 bits (1067), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/380 (58%), Positives = 289/380 (76%), Gaps = 11/380 (2%)

Query: 2   MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
           MG Q+SKK    +            Y+ +L  Y AAC+ D +LQSFD  +Q RTS VI  
Sbjct: 1   MGNQTSKKSQETSAKS-------VHYTTELRSYAAACKADTELQSFDTCLQARTSHVIST 53

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L+ GVEV +LSFDSLKEVT  LLEMNQEVVKVIL+CKKDIW NQ++F LVEDYFE S+KT
Sbjct: 54  LATGVEVRALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKT 113

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
           LDFC  LE  L+RAR+S L+I +A++QF++E  +Q       Y +TL+ELK FKDA  PF
Sbjct: 114 LDFCAALEKGLRRARDSHLLILVALQQFEDESLVQ---GGNGYKKTLEELKNFKDAESPF 170

Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
            E+FF +FQSVYKQQ+LMLE+LQ RK KLDKKLK + TWR +S+++FV+TF  VLI SVV
Sbjct: 171 NEDFFKMFQSVYKQQMLMLEKLQHRKNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVV 230

Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
           AAA+AAPP+  ALA A AVP+GS+GKW +SLW +YE ALKGQKE++S+MQ G +V + D+
Sbjct: 231 AAAMAAPPVAAALAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDL 290

Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
           D+IRVL+ +LEI+I  ++ +A+FA+ E + VK+ I++I+K+LEVF + +E L   AD CS
Sbjct: 291 DNIRVLIERLEIEITGMVKSAEFAV-EHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCS 349

Query: 362 RDIRRARTVILQKIIKYPNN 381
           RDIRRARTVILQ+IIK+PNN
Sbjct: 350 RDIRRARTVILQRIIKHPNN 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q10QE9|U496A_ORYSJ UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100 PE=2 SV=1

 Score =  410 bits (1055), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/354 (58%), Positives = 287/354 (81%), Gaps = 7/354 (1%)

Query: 34  YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
           YEAACR DP+L++FD T+Q RTSR I  L+ GVEV SLS +SL+EVTG LL+MNQEVV+V
Sbjct: 35  YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94

Query: 94  ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
           IL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E 
Sbjct: 95  ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154

Query: 154 E-------LQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKR 206
           +        ++     RY RTL EL++FK AGDPFTEEFF  FQ+VY+QQ+ MLE+LQ+R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214

Query: 207 KRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVG 266
           K +LDKK++++K WR VS+++F +TF AVLI SVVAAAIAAPP+  ALA A ++P+GS+G
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274

Query: 267 KWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFAL 326
           KW +SL   Y+ AL+GQKE++S MQ+G ++ I D+D IRVL+N++E++I ++++  +FA 
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334

Query: 327 REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPN 380
           R+E+ VK  +EEI+K+LEVFM+++E L + AD+CSRDIRRARTV+LQ+II++P+
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XDK8|U496A_ORYSI UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2 SV=1

 Score =  410 bits (1055), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/354 (58%), Positives = 287/354 (81%), Gaps = 7/354 (1%)

Query: 34  YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
           YEAACR DP+L++FD T+Q RTSR I  L+ GVEV SLS +SL+EVTG LL+MNQEVV+V
Sbjct: 35  YEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRV 94

Query: 94  ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
           IL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E 
Sbjct: 95  ILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEE 154

Query: 154 E-------LQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKR 206
           +        ++     RY RTL EL++FK AGDPFTEEFF  FQ+VY+QQ+ MLE+LQ+R
Sbjct: 155 DNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQAVYRQQLTMLEKLQQR 214

Query: 207 KRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVG 266
           K +LDKK++++K WR VS+++F +TF AVLI SVVAAAIAAPP+  ALA A ++P+GS+G
Sbjct: 215 KHRLDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMG 274

Query: 267 KWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFAL 326
           KW +SL   Y+ AL+GQKE++S MQ+G ++ I D+D IRVL+N++E++I ++++  +FA 
Sbjct: 275 KWIDSLLKGYQDALRGQKEVVSAMQVGTFIAIKDLDSIRVLINRVELEISSMIDCVEFAE 334

Query: 327 REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPN 380
           R+E+ VK  +EEI+K+LEVFM+++E L + AD+CSRDIRRARTV+LQ+II++P+
Sbjct: 335 RDEEAVKFGVEEIKKKLEVFMKSVEDLGEQADRCSRDIRRARTVVLQRIIRHPS 388

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8GW16|U496H_ARATH UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2 SV=1

 Score =  403 bits (1036), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/386 (54%), Positives = 300/386 (77%), Gaps = 9/386 (2%)

Query: 4   GQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
             SS+ +  + P P  ++ TD  + YSADL+ Y +ACR DPDLQSFD+++ +RT+RVI+ 
Sbjct: 14  SNSSRNRTNNTPLPQ-QIRTDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINS 72

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L++G +  SLSFD+L EV+G LLEMNQEVV+ I+E K+D+W+N+DL  LV  YF++SIKT
Sbjct: 73  LASGAQTRSLSFDALIEVSGCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKT 132

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDE---KRYVRTLDELKKFKDAG 178
           LDFC  ++NC+KRAR  Q+++Q A+KQF+ E        E    +Y +TL+EL KFK +G
Sbjct: 133 LDFCNAVDNCVKRARIGQMLLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASG 192

Query: 179 DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIF 238
           DPF  +FF+L +SVY+QQV++LE L K+KRKLDKKLK++K W+ +SNV+FV+ FV+VLIF
Sbjct: 193 DPFDGDFFMLLESVYEQQVMLLEILHKQKRKLDKKLKNIKYWKKISNVVFVTAFVSVLIF 252

Query: 239 SVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKI 298
           SVVAAA+AAPP+VTALA ALAVPIGS+GKWCN LW  YE A+KGQK+++ +M+IGAYV +
Sbjct: 253 SVVAAAVAAPPVVTALAAALAVPIGSIGKWCNHLWKKYETAVKGQKDIVLSMRIGAYVTM 312

Query: 299 MDMDHIRVLVNKLEIQIEALLNNADFALREED---VVKLAIEEIRKRLEVFMETIEVLCD 355
            DMD+IRV V+KL+I++E+++   DFAL+E++    V+L++ EI K+ +VF E IE + D
Sbjct: 313 KDMDNIRVHVDKLKIEMESMMQKVDFALKEKEEEVAVRLSMHEISKKFDVFTERIEEVGD 372

Query: 356 HADKCSRDIRRARTVILQKIIKYPNN 381
           +A KCS++I  ART++L+ I+ +P++
Sbjct: 373 NATKCSKNITLARTIVLRHILSFPSS 398

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SYZ8|U496B_ARATH UPF0496 protein At4g34330 OS=Arabidopsis thaliana GN=At4g34330 PE=3 SV=1

 Score =  335 bits (858), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 181/365 (49%), Positives = 250/365 (68%), Gaps = 18/365 (4%)

Query: 12  GDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSL 71
           G+  S   +  +   Y+ +L  YEAAC+ D ++QSFD  +Q RTS VI  L+ GVEV SL
Sbjct: 2   GNKTSRKSKEKSGRNYTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRSL 61

Query: 72  SFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENC 131
           SFDSLK V GSLL+MNQEV KVIL+CKKDIW NQ++F  VE YFETS+KTLDF   L+  
Sbjct: 62  SFDSLKAVIGSLLDMNQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFFNALKRG 121

Query: 132 LKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQS 191
           L+  + + L I                +D   Y +TL ELK+FKDA  PF ++FF +FQS
Sbjct: 122 LQGVQINHLFI----------------LDGNGYKKTLQELKRFKDADRPFDQDFFKMFQS 165

Query: 192 VYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLV 251
           VY QQ  ML++LQ+R+ KLDKKLK ++TWR +S+++F++TF  ++I SV+AA +AAP + 
Sbjct: 166 VYNQQKWMLDKLQRRQNKLDKKLKRIRTWRKLSSIIFMATFATLVICSVLAATMAAPHVA 225

Query: 252 TALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKL 311
            ALA A   P+GS+GKW +SLW +YE  +KGQ E+ S+M +G YV + D+++I+ L+ +L
Sbjct: 226 AALA-AATPPVGSMGKWIDSLWKNYENEIKGQTEVFSSMYVGTYVAVQDLNNIKDLIKRL 284

Query: 312 EIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVI 371
           + +I  ++ NA++A  E   VK+ I  I+ +LEVF + +E L   AD CS DIRRARTVI
Sbjct: 285 DTEIRGMVKNAEYA-GELGPVKIGINAIKTQLEVFKKNVEELEIQADMCSTDIRRARTVI 343

Query: 372 LQKII 376
           LQ+II
Sbjct: 344 LQRII 348

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVR3|U496G_ARATH UPF0496 protein At5g66670 OS=Arabidopsis thaliana GN=At5g66670 PE=2 SV=1

 Score =  313 bits (801), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 173/384 (45%), Positives = 256/384 (66%), Gaps = 9/384 (2%)

Query: 1   MMGGQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRV 58
           ++ G SS    G   S    + T+  +QYS+DLS Y +AC+    L+SFD+ + ERT+ +
Sbjct: 10  LIKGHSSSNNNGTNVSLAKTIQTNIRSQYSSDLSSYASACKKYSSLKSFDSLLHERTNSI 69

Query: 59  IHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETS 118
           I  L+A  +  SL+ +SL EV G LLE+NQ+ V+VI+E K+D+  N DL  LV+ YF+++
Sbjct: 70  ISSLAAQAKTRSLNIESLMEVYGYLLELNQDTVRVIIESKEDVLKNNDLKALVDVYFKST 129

Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV---ELQEVVDEKRYVRTLDELKKFK 175
            KTLDFC  +E C+K+A  SQLII+ AVKQF+ E    +L E   +K+YV+TL+E+ KFK
Sbjct: 130 SKTLDFCNTVEKCVKKAEISQLIIRFAVKQFETETVDTDLGES-KKKKYVKTLEEMNKFK 188

Query: 176 DAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAV 235
             GDPF  EF   ++SVY +QVL+L+ L+K K KL KKL+++KTWR++SNV+F + FV V
Sbjct: 189 AMGDPFDGEFVTQYKSVYDEQVLLLDELRKLKVKLGKKLRNIKTWRILSNVVFATAFVTV 248

Query: 236 LIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAY 295
            + SVVAAA+ APP+++A+A  L  PI  VG WCN +W  YEKA+K Q+ L+ TM++G  
Sbjct: 249 FVLSVVAAAMMAPPVLSAVASGLTTPIEVVGMWCNKMWKEYEKAVKRQRGLVLTMELGVQ 308

Query: 296 VKIMDMDHIRVLVNKLEIQIEALLNNADFAL-REED--VVKLAIEEIRKRLEVFMETIEV 352
              + M +I+  V  L I+I ++L   +FA+ REE+    + A++EI+K++E F E IE 
Sbjct: 309 ANNVTMVNIKFEVENLSIRISSILKTVNFAVDREENEMATRFAMQEIKKKVEGFTEKIEE 368

Query: 353 LCDHADKCSRDIRRARTVILQKII 376
           + + A  CS+ I   R V+L  I+
Sbjct: 369 VGERAANCSKLIALGRLVVLGHIL 392

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XFE1|U496E_ORYSJ Putative UPF0496 protein 5 OS=Oryza sativa subsp. japonica GN=Os10g0359200 PE=3 SV=2

 Score =  310 bits (794), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 166/326 (50%), Positives = 245/326 (75%), Gaps = 1/326 (0%)

Query: 34  YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
           YEAAC  DP+L +FD  ++ R SR I  +++GVEV SLS  SL+EVTG LL+MNQEVV+V
Sbjct: 33  YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRV 92

Query: 94  ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
           +L+CK+D+W + DLF LVEDYFE S+ TLDF   L+  L RAR+SQL++ LA+++   E 
Sbjct: 93  VLDCKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLALQRHHHEP 152

Query: 154 ELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKK 213
                  E  Y  TL EL++FK AG+PFT+EFF  FQ+VY+QQ+ M+ +L++RKR+LD++
Sbjct: 153 PAAASASEL-YASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLDRR 211

Query: 214 LKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLW 273
           L+S++ WR VS ++F+++F A+L+ SVVAAAIAAPP+  ALA A ++P+GS GKW +SL 
Sbjct: 212 LRSVRVWRRVSGIVFLTSFAALLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLL 271

Query: 274 NSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVK 333
             Y+ AL G KE++S MQ+G ++ I D+D IRVLV  LE+QI ++ ++ +FA R+E+ V+
Sbjct: 272 KKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEAVR 331

Query: 334 LAIEEIRKRLEVFMETIEVLCDHADK 359
             I+E++K+LE+FM++++ L + AD+
Sbjct: 332 FGIDEVKKKLELFMKSVDDLGEQADR 357

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LVR4|U496F_ARATH UPF0496 protein At5g66660 OS=Arabidopsis thaliana GN=At5g66660 PE=2 SV=1

 Score =  306 bits (784), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 176/389 (45%), Positives = 258/389 (66%), Gaps = 8/389 (2%)

Query: 1   MMGGQSSKKKGGDAPSPPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRV 58
           +M G+SS K+ G +  P  EV TD  ++YS+DLS Y +AC+ D +L+SFD+++ +RT+ +
Sbjct: 10  LMNGESSSKRNGPSTLPVKEVRTDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNII 69

Query: 59  IHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETS 118
           I  L+A  E  SL+ DSL EV G LLE+NQ  V+VI+E ++D+W N+DL  LV+ YF+++
Sbjct: 70  ITSLAARAETQSLNLDSLMEVYGFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKST 129

Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEE---VELQEVVDEKRYVRTLDELKKFK 175
            KTLDFC  +ENC+KR   SQLII+ AVKQF+ E    +L     +K+Y +TL+EL KFK
Sbjct: 130 SKTLDFCNTVENCVKRTEISQLIIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFK 189

Query: 176 DAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAV 235
             GDPF  E    F SVY QQVL LE L+K++RKLDKK +++KT R VSNV F + +V+V
Sbjct: 190 AMGDPFDGELVTQFDSVYDQQVLFLEELRKQRRKLDKKQRNVKTLRTVSNVFFATAYVSV 249

Query: 236 LIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAY 295
           L+ SVVA  ++APP+V A+A     PI   GKW + +W  YEKA+K Q+ L+ TM+    
Sbjct: 250 LVLSVVATTMSAPPVVCAVASGSTAPIEITGKWFSQMWKKYEKAVKRQRGLVLTMESRVQ 309

Query: 296 VKIMDMDHIRVLVNKLEIQIEALLNNADFAL---REEDVVKLAIEEIRKRLEVFMETIEV 352
           V    M +IR  V++L   + ++L   DFA+    EE+ + LA++ I+K ++ F E +E 
Sbjct: 310 VNNEAMKNIRSDVDELRSWVSSILETVDFAVEREEEEEAMGLAMQGIKKHVDGFTEKMEE 369

Query: 353 LCDHADKCSRDIRRARTVILQKIIKYPNN 381
           + ++A KCS+ I   R ++L+ I+  P N
Sbjct: 370 VGENAAKCSKFIALGRLLVLEHILGLPAN 398

Arabidopsis thaliana (taxid: 3702)

>sp|A2Z6C5|U496E_ORYSI Putative UPF0496 protein 5 OS=Oryza sativa subsp. indica GN=OsI_032118 PE=3 SV=1

 Score =  303 bits (777), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 166/327 (50%), Positives = 242/327 (74%), Gaps = 1/327 (0%)

Query: 34  YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKV 93
           YEAAC  DP+L +FD  ++ R SR I  +++GVEV SLS  SL+EVTG LL+MNQEVV+V
Sbjct: 36  YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRV 95

Query: 94  ILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEV 153
           +L CK+D+W + DLF LVEDYFE S+ TLDF   L+  L RAR+SQL++ LAV++   E 
Sbjct: 96  VLACKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLAVQRHHHEP 155

Query: 154 ELQEVVDEKR-YVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDK 212
                      Y  TL EL++FK AG+PFT+EFF  FQ+VY+QQ+ M+ +L++RKR+LD+
Sbjct: 156 PAAAAASASELYASTLGELRQFKAAGEPFTDEFFAAFQTVYRQQMSMVGKLRRRKRRLDR 215

Query: 213 KLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSL 272
           +L+S++ WR VS ++F++ F A+L+ SVVAAAIAAPP+  ALA A ++P+GS GKW +SL
Sbjct: 216 RLRSVRVWRRVSGIVFLTAFAALLVCSVVAAAIAAPPVAAALAPAASMPVGSAGKWMDSL 275

Query: 273 WNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDVV 332
              Y+ AL G KE++S MQ+G ++ I D+D IRVLV  LE+QI ++ ++ +FA R+E+ V
Sbjct: 276 LKKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVEHLEVQISSMADSVEFAERDEEAV 335

Query: 333 KLAIEEIRKRLEVFMETIEVLCDHADK 359
           +  I+E++K+LE+FM++++ L + AD+
Sbjct: 336 RFGIDEVKKKLELFMKSVDDLGEQADR 362

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
356498418	376	PREDICTED: UPF0496 protein At2g18630-lik	0.986	1.0	0.662	1e-133
357483269	380	hypothetical protein MTR_5g019430 [Medic	0.989	0.992	0.623	1e-133
255568241	390	AT14A, putative [Ricinus communis] gi|22	0.997	0.974	0.676	1e-132
255556119	380	AT14A, putative [Ricinus communis] gi|22	0.981	0.984	0.657	1e-132
224096914	379	predicted protein [Populus trichocarpa]	0.992	0.997	0.665	1e-131
356559420	376	PREDICTED: UPF0496 protein At2g18630-lik	0.984	0.997	0.658	1e-130
42569133	393	uncharacterized protein [Arabidopsis tha	0.986	0.956	0.609	1e-128
356496799	382	PREDICTED: UPF0496 protein At2g18630-lik	0.992	0.989	0.615	1e-128
4185129	392	At14a, putative [Arabidopsis thaliana] g	0.984	0.956	0.608	1e-128
224080287	363	predicted protein [Populus trichocarpa]	0.952	1.0	0.618	1e-126

>gi|356498418|ref|XP_003518049.1| PREDICTED: UPF0496 protein At2g18630-like [Glycine max]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/379 (66%), Positives = 313/379 (82%), Gaps = 3/379 (0%)

Query: 2   MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
           MGGQSSK    ++P+P +++ T + Y+ADLS YEAAC  DP+LQSFD +IQE T+RVI  
Sbjct: 1   MGGQSSKMVSVESPTP-IKMGTHSLYAADLSSYEAACVKDPNLQSFDVSIQEHTNRVISS 59

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L+ GVEV SLSFDSL+E+T SLLEMNQEVVKVIL+CKKDIW N +LF LV DYF+ S+ T
Sbjct: 60  LAHGVEVRSLSFDSLREMTDSLLEMNQEVVKVILDCKKDIWGNSELFSLVNDYFDNSLHT 119

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
           L+FC  LE CL++AR +Q+I++  V  F+EEV  Q   +   YV+TL ELKKFKDAGDPF
Sbjct: 120 LEFCNSLEKCLRQARENQMIVKSVVTYFEEEV--QNGAEGVTYVKTLQELKKFKDAGDPF 177

Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
           TEEF++LFQSVY QQ  ML++LQ RKRKLDKKLKS+KTWR VSN +FV+ FV+VLIFSVV
Sbjct: 178 TEEFYLLFQSVYTQQASMLQKLQIRKRKLDKKLKSLKTWRRVSNAIFVAAFVSVLIFSVV 237

Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
           AA+IAAPP+VTALA ALAVPIGSVGKWCNSL+  YEKALKGQ+E++S+MQIG Y+ + D+
Sbjct: 238 AASIAAPPVVTALAAALAVPIGSVGKWCNSLFKRYEKALKGQREVISSMQIGTYISLKDL 297

Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
           D+IRVL+NKLE+ +E+LL NADFA++ EDV+K AI+EI+K++E F ET+E L  HADKCS
Sbjct: 298 DNIRVLINKLELVLESLLQNADFAIKNEDVMKFAIDEIKKKIETFSETMESLSAHADKCS 357

Query: 362 RDIRRARTVILQKIIKYPN 380
           R IRRARTV++Q IIK P+
Sbjct: 358 RQIRRARTVVVQNIIKKPD 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483269|ref|XP_003611921.1| hypothetical protein MTR_5g019430 [Medicago truncatula] gi|355513256|gb|AES94879.1| hypothetical protein MTR_5g019430 [Medicago truncatula]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/382 (62%), Positives = 303/382 (79%), Gaps = 5/382 (1%)

Query: 2   MGGQSSKKKGGDAPSP-PLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIH 60
           MG QSSK    +   P P+++   + Y+ADLS YEAAC  DP+LQSFDATIQERT+RVI+
Sbjct: 1   MGCQSSKGIDSNTDVPTPIQMGAHSLYAADLSSYEAACVNDPNLQSFDATIQERTNRVIN 60

Query: 61  KLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWN--NQDLFGLVEDYFETS 118
            L+ G+EV S+S +SL EVTGSLL+MNQEVVKVILECK+DIWN  ++DLF LVED+FE S
Sbjct: 61  SLAQGIEVRSISLESLGEVTGSLLDMNQEVVKVILECKQDIWNKKDRDLFSLVEDFFENS 120

Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAG 178
           ++TL+FC  LE CLKRAR   ++++ A+  FDEEV  Q  V+   YV+TL  LK FK+  
Sbjct: 121 LQTLEFCNALEKCLKRAREKLVVVKSAMTCFDEEV--QNGVEGSTYVKTLKGLKDFKETE 178

Query: 179 DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIF 238
           DPFTEEF+ LFQSVY QQ  ML++L  RK+ LDKKLKS KT + VS+V+FV+ FVAVLIF
Sbjct: 179 DPFTEEFYSLFQSVYTQQSSMLKKLLIRKQNLDKKLKSHKTLKRVSSVIFVAAFVAVLIF 238

Query: 239 SVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKI 298
           SVVAAAI+APP+VTALAGALAVPIGSVGKWCNSL+  YE ALKGQ+E++S+M +G Y+ +
Sbjct: 239 SVVAAAISAPPVVTALAGALAVPIGSVGKWCNSLFKKYETALKGQREVISSMHVGTYIAL 298

Query: 299 MDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHAD 358
           +DM++IRV +N+LEI+IE+++  ADFAL  ED VKLAI+EI+K++E F E IE L   AD
Sbjct: 299 VDMNNIRVRINQLEIKIESMVQTADFALGNEDAVKLAIDEIKKKIETFAEIIESLSVQAD 358

Query: 359 KCSRDIRRARTVILQKIIKYPN 380
           +CSR  R+ARTV++QKIIKY +
Sbjct: 359 QCSRQTRKARTVVVQKIIKYSS 380

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568241|ref|XP_002525095.1| AT14A, putative [Ricinus communis] gi|223535554|gb|EEF37222.1| AT14A, putative [Ricinus communis]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/389 (67%), Positives = 329/389 (84%), Gaps = 9/389 (2%)

Query: 1   MMGGQSSKKKG------GDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQER 54
           MMGGQ SKKKG         P PPL++ +++QY+ADL+ YE AC LDPDLQ+FD T+ ER
Sbjct: 1   MMGGQFSKKKGVANPTPPPPPPPPLKINSNSQYTADLTSYEDACMLDPDLQAFDTTLHER 60

Query: 55  TSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDY 114
           T+RV++ LS GVEV SLSF+SLKEVT  LL+MNQ+VV VIL+CK+DIW+N++L  LV++Y
Sbjct: 61  TNRVLNSLSTGVEVRSLSFNSLKEVTNCLLDMNQDVVNVILQCKEDIWDNKELSALVKEY 120

Query: 115 FETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKF 174
           FE+S KTLDFC  LE+CLKRARNSQLIIQ+A+++F+EEV L + V E +YV+TL+EL+ F
Sbjct: 121 FESSAKTLDFCAALESCLKRARNSQLIIQVALRRFEEEVALHDGVVETKYVKTLEELRNF 180

Query: 175 KDAGDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVA 234
           K AGDPFT+EF++LFQSVY+QQV ML++LQ RK+KLDKK+KSMKTWR VSNVLFVS FV+
Sbjct: 181 KAAGDPFTDEFYILFQSVYRQQVSMLQKLQLRKKKLDKKMKSMKTWRRVSNVLFVSAFVS 240

Query: 235 VLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGA 294
           VLIFSVVAAAIAAPP+VTALAGALAVPIGSVGKWCNSLWN Y KALKGQKEL+S+MQ+G 
Sbjct: 241 VLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLWNGYMKALKGQKELVSSMQVGT 300

Query: 295 YVKIMDMDHIRVLVNKLEIQIEALLNNADFALREED---VVKLAIEEIRKRLEVFMETIE 351
           ++ I DMD+IR+LVNKLE +I+ALL N + AL  ED   +VK+ I++I+K+LE FM+TIE
Sbjct: 301 FIVIQDMDNIRILVNKLEAEIDALLQNVNIALINEDAFEIVKIVIDDIKKKLEEFMQTIE 360

Query: 352 VLCDHADKCSRDIRRARTVILQKIIKYPN 380
            L +HA KCS DI +ARTVILQ+II+YP+
Sbjct: 361 DLGEHASKCSHDITQARTVILQRIIRYPD 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556119|ref|XP_002519094.1| AT14A, putative [Ricinus communis] gi|223541757|gb|EEF43305.1| AT14A, putative [Ricinus communis]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/380 (65%), Positives = 308/380 (81%), Gaps = 6/380 (1%)

Query: 2   MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
           MGG  SKK   +A S  + +  + QY  +LS YEAAC+LD DLQSFD ++Q RT+ VI+ 
Sbjct: 1   MGGHVSKKTT-EASSSAINIHNNLQYITELSSYEAACKLDEDLQSFDTSLQVRTNHVINT 59

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L+ GVEV SLSFDSLKEVT  LLEMNQEVVKVILECKKDIW NQ+LF LVE+YFE S++T
Sbjct: 60  LAVGVEVRSLSFDSLKEVTECLLEMNQEVVKVILECKKDIWKNQELFELVEEYFENSLQT 119

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
           LDFCT LE CLKRAR+SQL I +A++QF+EE E        RYV+TL+ LK FK AGDPF
Sbjct: 120 LDFCTALEKCLKRARDSQLFILVALQQFEEENE----AGGNRYVKTLEGLKNFKSAGDPF 175

Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
           TEEFF +FQSVY+QQ+LMLE+LQ RK KLDKKLK +  WR VS+++FV+TF AVLI SVV
Sbjct: 176 TEEFFQIFQSVYRQQMLMLEKLQHRKNKLDKKLKCLHAWRKVSSIIFVATFAAVLICSVV 235

Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
           AAA+AAPP+  ALA A ++P+GS+GKW +SLW +YE ALKG+KEL+STMQ+G YV I D+
Sbjct: 236 AAAMAAPPVAAALAAATSIPLGSMGKWIDSLWKNYENALKGEKELISTMQVGTYVAIKDL 295

Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
           D+IRVL+N+LEI IEAL++NA+FA+ E+D VK+AI EIRK+L+VFM+ IE L   AD CS
Sbjct: 296 DNIRVLINRLEIDIEALMHNAEFAI-EQDAVKVAIVEIRKKLDVFMKHIEDLGAQADTCS 354

Query: 362 RDIRRARTVILQKIIKYPNN 381
           RDIRRARTV+LQ+IIK+PNN
Sbjct: 355 RDIRRARTVVLQRIIKHPNN 374

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096914|ref|XP_002310784.1| predicted protein [Populus trichocarpa] gi|222853687|gb|EEE91234.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/380 (66%), Positives = 314/380 (82%), Gaps = 2/380 (0%)

Query: 1   MMGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIH 60
           MMGGQSSK +G D PS PL+  T++Q   DL+ YE AC  DP+LQSFDA + ERT+ VI+
Sbjct: 1   MMGGQSSKTRGSDTPSLPLQANTNSQLREDLTSYEDACNRDPELQSFDAALHERTNHVIN 60

Query: 61  KLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIK 120
            L+ GV +  LS  S KEVT  LLEMNQ+VVKVILE K+DIWNN++LFGLVE+YFE S+K
Sbjct: 61  SLATGVGI--LSLGSFKEVTNCLLEMNQDVVKVILESKEDIWNNRELFGLVEEYFENSVK 118

Query: 121 TLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDP 180
           T++FC  LE+ LKRA+NSQLIIQ A+KQF+EEVE+Q+   EK++V+TL+ L+KFK AGDP
Sbjct: 119 TMEFCAALESSLKRAQNSQLIIQFAIKQFEEEVEMQDGAVEKKFVKTLEGLQKFKAAGDP 178

Query: 181 FTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSV 240
           FT +FF LFQSV +QQV ML++LQ RK+KLDKK+KSMKTWR VSNVLFVS FV+VLI SV
Sbjct: 179 FTPQFFALFQSVSEQQVSMLKKLQSRKKKLDKKMKSMKTWRRVSNVLFVSAFVSVLIISV 238

Query: 241 VAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMD 300
           VAAAIAAPP++TA+AGA+AVP+GSVGKWCN LWN YEKALK QKEL+ +MQ+G +V I D
Sbjct: 239 VAAAIAAPPVLTAVAGAIAVPVGSVGKWCNMLWNRYEKALKEQKELVRSMQVGTFVTIND 298

Query: 301 MDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKC 360
           MD IRVLV KL++ I++LL+NADFA+REED VKL I+EI+K++ VFME IE L  HADKC
Sbjct: 299 MDSIRVLVIKLQMGIQSLLDNADFAIREEDAVKLVIDEIKKKMAVFMEIIEDLAAHADKC 358

Query: 361 SRDIRRARTVILQKIIKYPN 380
           +RDI  ART+IL +I+KY +
Sbjct: 359 NRDISLARTMILNRILKYAD 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559420|ref|XP_003547997.1| PREDICTED: UPF0496 protein At2g18630-like [Glycine max]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/378 (65%), Positives = 309/378 (81%), Gaps = 3/378 (0%)

Query: 2   MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
           MGGQSSK    ++P+P +++ T + Y+ADLS YEAAC  DP+LQSFD +IQE T+RVI  
Sbjct: 1   MGGQSSKMFSVESPTP-IKMGTHSLYAADLSSYEAACVKDPNLQSFDVSIQEHTNRVISS 59

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L+ GVEV SLSFDSL+E+T SLLEMNQEVVKVIL+CKKDIW N +LF LV DYF  S++T
Sbjct: 60  LAHGVEVRSLSFDSLREMTDSLLEMNQEVVKVILDCKKDIWGNSELFSLVNDYFNNSLQT 119

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
           L+FC  LE CL+RAR +Q+I++  V  F+EE   Q   D   YV+TL ELKKFKDA DPF
Sbjct: 120 LEFCNSLEKCLRRARENQMIVKSVVTYFEEEG--QNGADGVTYVKTLQELKKFKDARDPF 177

Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
           TEEF++LFQSVY QQ  ML++LQ RKRKLDKKLKS+KTW+ VSNV+FV+ FV+VLIFSVV
Sbjct: 178 TEEFYLLFQSVYAQQASMLQKLQIRKRKLDKKLKSLKTWKRVSNVIFVAAFVSVLIFSVV 237

Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
           AA++AAPP+VTALA ALAVPIGSVGKWCNSL+  YEKALKGQ+E++S+MQIG ++ + D+
Sbjct: 238 AASVAAPPVVTALAAALAVPIGSVGKWCNSLFKRYEKALKGQREVISSMQIGTFISLKDL 297

Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
           D+IRVLVNKLE  +E+LL NADFA++ EDV+K AI+EI+K++E F ET+E L  HADKC 
Sbjct: 298 DNIRVLVNKLEGVLESLLQNADFAIKNEDVMKFAIDEIKKKIEAFSETMENLSTHADKCC 357

Query: 362 RDIRRARTVILQKIIKYP 379
           R IRRARTV++Q IIK P
Sbjct: 358 RQIRRARTVVIQNIIKKP 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569133|ref|NP_179453.2| uncharacterized protein [Arabidopsis thaliana] gi|334302873|sp|Q56XQ0.3|U496I_ARATH RecName: Full=UPF0496 protein At2g18630 gi|62320594|dbj|BAD95236.1| hypothetical protein [Arabidopsis thaliana] gi|330251693|gb|AEC06787.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/382 (60%), Positives = 312/382 (81%), Gaps = 6/382 (1%)

Query: 1   MMGGQSSKKKGG---DAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSR 57
           MMGG+SSK K      +PS P+++  +++Y+  LS YE AC  DP L+SFD+ + ERT+R
Sbjct: 1   MMGGKSSKSKKNVEFGSPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNR 60

Query: 58  VIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFET 117
           VI+KL++GVE+ SLSFDSL+EVT  LL+MNQ+VVKVIL+ K+DIWNNQDLF LV  YFE+
Sbjct: 61  VINKLASGVEIKSLSFDSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFES 120

Query: 118 SIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDA 177
           + KT+DFC+ LENCL RAR SQ+IIQ AV QF+EE E +E    ++Y +TL+ELK+FK A
Sbjct: 121 TAKTMDFCSELENCLNRARRSQVIIQFAVNQFEEENEDKE---NRKYEKTLEELKRFKVA 177

Query: 178 GDPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLI 237
           G+PFT+EFF LF  VYKQQV+MLE L K KRKLDK+L+++KTWR VSN++FV+ FV+VLI
Sbjct: 178 GEPFTKEFFALFDLVYKQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVLI 237

Query: 238 FSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVK 297
           FSVVAAA+AAPP+V A+AGALAVP+GSVGKWCN+LW  YEK ++GQKE++++++IG Y+ 
Sbjct: 238 FSVVAAAVAAPPVVAAIAGALAVPVGSVGKWCNTLWTKYEKVVRGQKEIITSIRIGTYIS 297

Query: 298 IMDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHA 357
           + +MD+I +LV K+E++IE+LL  A+FA+ EE  V+LAI+EI+K+L+VF ETIE L +HA
Sbjct: 298 VKEMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHA 357

Query: 358 DKCSRDIRRARTVILQKIIKYP 379
            K   D+ +ARTVILQ+II+YP
Sbjct: 358 GKYCSDVTKARTVILQRIIRYP 379

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496799|ref|XP_003517253.1| PREDICTED: UPF0496 protein At2g18630-like [Glycine max]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/382 (61%), Positives = 306/382 (80%), Gaps = 4/382 (1%)

Query: 1   MMGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIH 60
           MMGGQSSK         P+++ T + Y+ADL+ YEAAC  DP+LQS DATIQERT+RVI 
Sbjct: 1   MMGGQSSKIPSNSGVPTPIKMGTHSLYAADLNSYEAACVEDPNLQSLDATIQERTNRVIT 60

Query: 61  KLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQD--LFGLVEDYFETS 118
            L+ G+EV S+S +SL E+TGSLLEMNQ+V KVILEC++DIWN +D  LF LVED+FE S
Sbjct: 61  SLANGIEVRSISIESLGEMTGSLLEMNQDVAKVILECQQDIWNKKDRELFSLVEDFFENS 120

Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAG 178
           ++TL+FC  L+ CL RAR   +I++ A+  F+EEV  Q  V+   Y++TL ELK FK+AG
Sbjct: 121 LQTLNFCNALDKCLNRARGRHVIVKSAITCFEEEV--QNGVEGSTYLKTLQELKGFKEAG 178

Query: 179 DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIF 238
           DPFTEEF+ LFQSVY+QQ  ML++L+ RK+KLDKKLKS KT + VSN +FV+ FV+VLIF
Sbjct: 179 DPFTEEFYSLFQSVYQQQASMLKKLKIRKQKLDKKLKSFKTLKRVSNAIFVAAFVSVLIF 238

Query: 239 SVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKI 298
           SVVAAAIAAPP+VTALAGALAVPIGSVGKWCNSL+  YE ALKGQ+EL+S+MQ+G+Y+ +
Sbjct: 239 SVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKRYETALKGQRELISSMQVGSYITL 298

Query: 299 MDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHAD 358
           +D+ +IR+ +++LEI+IE++L ++DFALR ED VK AI+EI+K +++F ETIE L   AD
Sbjct: 299 VDLKNIRLRIDQLEIKIESMLQSSDFALRNEDAVKFAIDEIKKNIDIFAETIEALSKQAD 358

Query: 359 KCSRDIRRARTVILQKIIKYPN 380
           +CSR IR ARTV+++KII Y N
Sbjct: 359 ECSRQIRMARTVVVKKIINYTN 380

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4185129|gb|AAD08932.1| At14a, putative [Arabidopsis thaliana] gi|20197572|gb|AAM15135.1| At14a, putative [Arabidopsis thaliana]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/381 (60%), Positives = 311/381 (81%), Gaps = 6/381 (1%)

Query: 2   MGGQSSKKKGG---DAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRV 58
           MGG+SSK K      +PS P+++  +++Y+  LS YE AC  DP L+SFD+ + ERT+RV
Sbjct: 1   MGGKSSKSKKNVEFGSPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNRV 60

Query: 59  IHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETS 118
           I+KL++GVE+ SLSFDSL+EVT  LL+MNQ+VVKVIL+ K+DIWNNQDLF LV  YFE++
Sbjct: 61  INKLASGVEIKSLSFDSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFEST 120

Query: 119 IKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAG 178
            KT+DFC+ LENCL RAR SQ+IIQ AV QF+EE E +E    ++Y +TL+ELK+FK AG
Sbjct: 121 AKTMDFCSELENCLNRARRSQVIIQFAVNQFEEENEDKE---NRKYEKTLEELKRFKVAG 177

Query: 179 DPFTEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIF 238
           +PFT+EFF LF  VYKQQV+MLE L K KRKLDK+L+++KTWR VSN++FV+ FV+VLIF
Sbjct: 178 EPFTKEFFALFDLVYKQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVLIF 237

Query: 239 SVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKI 298
           SVVAAA+AAPP+V A+AGALAVP+GSVGKWCN+LW  YEK ++GQKE++++++IG Y+ +
Sbjct: 238 SVVAAAVAAPPVVAAIAGALAVPVGSVGKWCNTLWTKYEKVVRGQKEIITSIRIGTYISV 297

Query: 299 MDMDHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHAD 358
            +MD+I +LV K+E++IE+LL  A+FA+ EE  V+LAI+EI+K+L+VF ETIE L +HA 
Sbjct: 298 KEMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHAG 357

Query: 359 KCSRDIRRARTVILQKIIKYP 379
           K   D+ +ARTVILQ+II+YP
Sbjct: 358 KYCSDVTKARTVILQRIIRYP 378

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080287|ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|222849047|gb|EEE86594.1| predicted protein [Populus trichocarpa]

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/380 (61%), Positives = 295/380 (77%), Gaps = 17/380 (4%)

Query: 2   MGGQSSKKKGGDAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHK 61
           MGG  SK+   +A S  + +  + QY+ +LS YEAACRLD DLQSFD T+Q RT+ VI+ 
Sbjct: 1   MGGHVSKRPA-EASSSAINLNNNLQYTTELSSYEAACRLDKDLQSFDTTLQARTNHVINT 59

Query: 62  LSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKT 121
           L+ G+EV +LSFDSLKEVT  LLEMNQEVVKVILECKKDIW +Q+LF LVE+YFE S++T
Sbjct: 60  LAVGIEVRALSFDSLKEVTECLLEMNQEVVKVILECKKDIWKDQELFELVEEYFENSLQT 119

Query: 122 LDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPF 181
           LDFC  LE CLKRAR+SQL+I               +  E+ YVRTL+ELK FK AGDPF
Sbjct: 120 LDFCAALEKCLKRARDSQLLI---------------LAGEREYVRTLEELKNFKAAGDPF 164

Query: 182 TEEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVV 241
           T+EFF +FQSVY+QQ++MLE+LQ RK KLDKKLK + TWR VS+++FV+TF  VLI SVV
Sbjct: 165 TDEFFQIFQSVYRQQIMMLEKLQLRKNKLDKKLKCIHTWRKVSSMIFVATFATVLICSVV 224

Query: 242 AAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDM 301
           AAA+ APP+V A+A A  +P+GS+GKW +SLW +YE ALKGQKE++STMQ+G YV I D+
Sbjct: 225 AAAMTAPPVVAAVAAASTIPLGSMGKWIDSLWKNYENALKGQKEVISTMQVGTYVAIKDL 284

Query: 302 DHIRVLVNKLEIQIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCS 361
           D+IRVL+++LEI+IEAL+   DFA+ E   VK+AIEEI+K+L VFM+ +E L   AD CS
Sbjct: 285 DNIRVLIDRLEIEIEALMRTTDFAI-EHGAVKVAIEEIKKKLGVFMKNVEDLGVLADTCS 343

Query: 362 RDIRRARTVILQKIIKYPNN 381
           RDI RARTV+LQ+IIK PNN
Sbjct: 344 RDIMRARTVVLQRIIKNPNN 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
TAIR|locus:2053962	393	AT2G18630 [Arabidopsis thalian	0.952	0.923	0.516	4.5e-98
TAIR|locus:2116214	374	AT4G34320 "AT4G34320" [Arabido	0.921	0.938	0.518	2.4e-92
TAIR|locus:1005716837	412	AT5G66675 "AT5G66675" [Arabido	0.955	0.883	0.462	1.4e-87
TAIR|locus:2173649	408	AT5G66670 "AT5G66670" [Arabido	0.923	0.862	0.389	1.6e-63
TAIR|locus:2173639	398	AT5G66660 "AT5G66660" [Arabido	0.968	0.927	0.382	3.8e-62
TAIR|locus:2116139	354	AT4G34330 "AT4G34330" [Arabido	0.496	0.533	0.482	1.4e-41
TAIR|locus:2095425	384	AT3G28310 "AT3G28310" [Arabido	0.451	0.447	0.375	3.4e-32
TAIR|locus:2095405	384	AT3G28320 "AT3G28320" [Arabido	0.451	0.447	0.375	3.4e-32
TAIR|locus:2095395	374	AT3G28270 "AT3G28270" [Arabido	0.897	0.914	0.280	6e-32
TAIR|locus:2830181	385	AT14A "AT3G28300" [Arabidopsis	0.769	0.761	0.279	2.2e-25

TAIR|locus:2053962 AT2G18630 [Arabidopsis thaliana (taxid:3702)]

 Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
 Identities = 189/366 (51%), Positives = 256/366 (69%)

Query:    14 APSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSF 73
             +PS P+++  +++Y+  LS YE AC  DP L+SFD+ + ERT+RVI+KL++GVE+ SLSF
Sbjct:    17 SPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNRVINKLASGVEIKSLSF 76

Query:    74 DSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLK 133
             DSL+EVT  LL+MNQ+VVKVIL+ K+DIWNNQDLF LV  YFE++ KT+DFC+ LENCL 
Sbjct:    77 DSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFESTAKTMDFCSELENCLN 136

Query:   134 RARNSQLIIQLAVKQFXXXXXXXXXXXXKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVY 193
             RAR SQ+IIQ AV QF            ++Y +TL+ELK+FK AG+PFT+EFF LF  VY
Sbjct:   137 RARRSQVIIQFAVNQFEEENEDKEN---RKYEKTLEELKRFKVAGEPFTKEFFALFDLVY 193

Query:   194 KQQVXXXXXXXXXXXXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXXX 253
             KQQV                     TWR VSN++FV+                       
Sbjct:   194 KQQVMMLEELHKLKRKLDKRLRNIKTWRRVSNMVFVTAFVSVLIFSVVAAAVAAPPVVAA 253

Query:   254 XXGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEI 313
               GALAVP+GSVGKWCN+LW  YEK ++GQKE++++++IG Y+ + +MD+I +LV K+E+
Sbjct:   254 IAGALAVPVGSVGKWCNTLWTKYEKVVRGQKEIITSIRIGTYISVKEMDNISILVRKVEV 313

Query:   314 QIEALLNNADFALREEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQ 373
             +IE+LL  A+FA+ EE  V+LAI+EI+K+L+VF ETIE L +HA K   D+ +ARTVILQ
Sbjct:   314 EIESLLKKAEFAITEEKEVRLAIDEIKKKLDVFTETIEELGEHAGKYCSDVTKARTVILQ 373

Query:   374 KIIKYP 379
             +II+YP
Sbjct:   374 RIIRYP 379

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2116214 AT4G34320 "AT4G34320" [Arabidopsis thaliana (taxid:3702)]

 Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
 Identities = 184/355 (51%), Positives = 240/355 (67%)

Query:    27 YSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEM 86
             Y+ +L  Y AAC+ D +LQSFD  +Q RTS VI  L+ GVEV +LSFDSLKEVT  LLEM
Sbjct:    19 YTTELRSYAAACKADTELQSFDTCLQARTSHVISTLATGVEVRALSFDSLKEVTQCLLEM 78

Query:    87 NQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAV 146
             NQEVVKVIL+CKKDIW NQ++F LVEDYFE S+KTLDFC  LE  L+RAR+S L+I +A+
Sbjct:    79 NQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAALEKGLRRARDSHLLILVAL 138

Query:   147 KQFXXXXXXXXXXXXKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVXXXXXXXXX 206
             +QF              Y +TL+ELK FKDA  PF E+FF +FQSVYKQQ+         
Sbjct:   139 QQFEDESLVQGGNG---YKKTLEELKNFKDAESPFNEDFFKMFQSVYKQQMLMLEKLQHR 195

Query:   207 XXXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXXXXXGALAVPIGSVG 266
                         TWR +S+++FV+T                         A AVP+GS+G
Sbjct:   196 KNKLDKKLKCIHTWRKLSSIIFVATFATVLICSVVAAAMAAPPVAAALAAATAVPLGSMG 255

Query:   267 KWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFAL 326
             KW +SLW +YE ALKGQKE++S+MQ G +V + D+D+IRVL+ +LEI+I  ++ +A+FA+
Sbjct:   256 KWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIERLEIEITGMVKSAEFAV 315

Query:   327 REEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKIIKYPNN 381
              E + VK+ I++I+K+LEVF + +E L   AD CSRDIRRARTVILQ+IIK+PNN
Sbjct:   316 -EHNAVKIGIDDIKKKLEVFKKNVEELGTQADLCSRDIRRARTVILQRIIKHPNN 369

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:1005716837 AT5G66675 "AT5G66675" [Arabidopsis thaliana (taxid:3702)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 172/372 (46%), Positives = 249/372 (66%)

Query:    18 PLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDS 75
             P ++ TD  + YSADL+ Y +ACR DPDLQSFD+++ +RT+RVI+ L++G +  SLSFD+
Sbjct:    27 PQQIRTDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINSLASGAQTRSLSFDA 86

Query:    76 LKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRA 135
             L EV+G LLEMNQEVV+ I+E K+D+W+N+DL  LV  YF++SIKTLDFC  ++NC+KRA
Sbjct:    87 LIEVSGCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKTLDFCNAVDNCVKRA 146

Query:   136 RNSQLIIQLAVKQFXXXXXXXXXXX---XKRYVRTLDELKKFKDAGDPFTEEFFVLFQSV 192
             R  Q+++Q A+KQF                +Y +TL+EL KFK +GDPF  +FF+L +SV
Sbjct:   147 RIGQMLLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASGDPFDGDFFMLLESV 206

Query:   193 YKQQVXXXXXXXXXXXXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXX 252
             Y+QQV                      W+ +SNV+FV+                      
Sbjct:   207 YEQQVMLLEILHKQKRKLDKKLKNIKYWKKISNVVFVTAFVSVLIFSVVAAAVAAPPVVT 266

Query:   253 XXXGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLE 312
                 ALAVPIGS+GKWCN LW  YE A+KGQK+++ +M+IGAYV + DMD+IRV V+KL+
Sbjct:   267 ALAAALAVPIGSIGKWCNHLWKKYETAVKGQKDIVLSMRIGAYVTMKDMDNIRVHVDKLK 326

Query:   313 IQIEALLNNADFALRE--EDV-VKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRART 369
             I++E+++   DFAL+E  E+V V+L++ EI K+ +VF E IE + D+A KCS++I  ART
Sbjct:   327 IEMESMMQKVDFALKEKEEEVAVRLSMHEISKKFDVFTERIEEVGDNATKCSKNITLART 386

Query:   370 VILQKIIKYPNN 381
             ++L+ I+ +P++
Sbjct:   387 IVLRHILSFPSS 398

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2173649 AT5G66670 "AT5G66670" [Arabidopsis thaliana (taxid:3702)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 139/357 (38%), Positives = 203/357 (56%)

Query:    25 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLL 84
             +QYS+DLS Y +AC+    L+SFD+ + ERT+ +I  L+A  +  SL+ +SL EV G LL
Sbjct:    36 SQYSSDLSSYASACKKYSSLKSFDSLLHERTNSIISSLAAQAKTRSLNIESLMEVYGYLL 95

Query:    85 EMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQL 144
             E+NQ+ V+VI+E K+D+  N DL  LV+ YF+++ KTLDFC  +E C+K+A  SQLII+ 
Sbjct:    96 ELNQDTVRVIIESKEDVLKNNDLKALVDVYFKSTSKTLDFCNTVEKCVKKAEISQLIIRF 155

Query:   145 AVKQFXXXXXXXXXXXXKR--YVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVXXXXX 202
             AVKQF            K+  YV+TL+E+ KFK  GDPF  EF   ++SVY +QV     
Sbjct:   156 AVKQFETETVDTDLGESKKKKYVKTLEEMNKFKAMGDPFDGEFVTQYKSVYDEQVLLLDE 215

Query:   203 XXXXXXXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXXXXXGALAVPI 262
                             TWR++SNV+F +                           L  PI
Sbjct:   216 LRKLKVKLGKKLRNIKTWRILSNVVFATAFVTVFVLSVVAAAMMAPPVLSAVASGLTTPI 275

Query:   263 GSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNA 322
               VG WCN +W  YEKA+K Q+ L+ TM++G     + M +I+  V  L I+I ++L   
Sbjct:   276 EVVGMWCNKMWKEYEKAVKRQRGLVLTMELGVQANNVTMVNIKFEVENLSIRISSILKTV 335

Query:   323 DFAL-REED--VVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKII 376
             +FA+ REE+    + A++EI+K++E F E IE + + A  CS+ I   R V+L  I+
Sbjct:   336 NFAVDREENEMATRFAMQEIKKKVEGFTEKIEEVGERAANCSKLIALGRLVVLGHIL 392

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2173639 AT5G66660 "AT5G66660" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 145/379 (38%), Positives = 208/379 (54%)

Query:    13 DAPS--PPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEV 68
             + PS  P  EV TD  ++YS+DLS Y +AC+ D +L+SFD+++ +RT+ +I  L+A  E 
Sbjct:    20 NGPSTLPVKEVRTDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNIIITSLAARAET 79

Query:    69 HSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVL 128
              SL+ DSL EV G LLE+NQ  V+VI+E ++D+W N+DL  LV+ YF+++ KTLDFC  +
Sbjct:    80 QSLNLDSLMEVYGFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKSTSKTLDFCNTV 139

Query:   129 ENCLKRARNSQLIIQLAVKQFXXXXXXXXXXXXKR---YVRTLDELKKFKDAGDPFTEEF 185
             ENC+KR   SQLII+ AVKQF            K+   Y +TL+EL KFK  GDPF  E 
Sbjct:   140 ENCVKRTEISQLIIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFKAMGDPFDGEL 199

Query:   186 FVLFQSVYKQQVXXXXXXXXXXXXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXX 245
                F SVY QQV                     T R VSNV F +               
Sbjct:   200 VTQFDSVYDQQVLFLEELRKQRRKLDKKQRNVKTLRTVSNVFFATAYVSVLVLSVVATTM 259

Query:   246 XXXXXXXXXXGALAVPIGSVGKWCNSLWNSYEKALKGQKELMSTMQIGAYVKIMDMDHIR 305
                            PI   GKW + +W  YEKA+K Q+ L+ TM+    V    M +IR
Sbjct:   260 SAPPVVCAVASGSTAPIEITGKWFSQMWKKYEKAVKRQRGLVLTMESRVQVNNEAMKNIR 319

Query:   306 VLVNKLEIQIEALLNNADFALR---EEDVVKLAIEEIRKRLEVFMETIEVLCDHADKCSR 362
               V++L   + ++L   DFA+    EE+ + LA++ I+K ++ F E +E + ++A KCS+
Sbjct:   320 SDVDELRSWVSSILETVDFAVEREEEEEAMGLAMQGIKKHVDGFTEKMEEVGENAAKCSK 379

Query:   363 DIRRARTVILQKIIKYPNN 381
              I   R ++L+ I+  P N
Sbjct:   380 FIALGRLLVLEHILGLPAN 398

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2116139 AT4G34330 "AT4G34330" [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 99/205 (48%), Positives = 123/205 (60%)

Query:    27 YSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEM 86
             Y+ +L  YEAAC+ D ++QSFD  +Q RTS VI  L+ GVEV SLSFDSLK V GSLL+M
Sbjct:    17 YTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRSLSFDSLKAVIGSLLDM 76

Query:    87 NQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAV 146
             NQEV KVIL+CKKDIW NQ++F  VE YFETS+KTLDF     N LKR      I  L +
Sbjct:    77 NQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFF----NALKRGLQGVQINHLFI 132

Query:   147 KQFXXXXXXXXXXXXKRYVRTLDELKKFKDAGDPFTEEFFVLFQSVYKQQVXXXXXXXXX 206
                              Y +TL ELK+FKDA  PF ++FF +FQSVY QQ          
Sbjct:   133 LD------------GNGYKKTLQELKRFKDADRPFDQDFFKMFQSVYNQQKWMLDKLQRR 180

Query:   207 XXXXXXXXXXXXTWRMVSNVLFVST 231
                         TWR +S+++F++T
Sbjct:   181 QNKLDKKLKRIRTWRKLSSIIFMAT 205

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2095425 AT3G28310 "AT3G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 66/176 (37%), Positives = 100/176 (56%)

Query:    25 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSL-KEVTG-S 82
             ++YS  +  Y AAC   PDL+SFD+ IQ+RTS +I  L+   +  S+S  ++ KEV    
Sbjct:     9 SRYSEHVDAYRAACGHHPDLKSFDSKIQQRTSNLIDSLTVEAKTGSVSPHAVHKEVIDIH 68

Query:    83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
             L+E+++ V  VI EC +++W N  L  LV+DYF ++++TL     +  C+  A+  Q  I
Sbjct:    69 LVEVSKAVADVITECGEEVWENGTLQSLVKDYFNSTMETLKIFETVTQCVHEAKRGQRYI 128

Query:   143 QLAVKQFXXXXXXXXXXXXK-RYVRTLDELKKFKDAGDPFTEEFF-VLFQSVYKQQ 196
             + AV QF            K RY +TL+EL KFK  G+PF +      F+ + KQQ
Sbjct:   129 KAAVAQFKKDSEEKDVGVKKKRYGKTLEELMKFKAMGNPFDDGLLKTQFELMNKQQ 184

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095405 AT3G28320 "AT3G28320" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 66/176 (37%), Positives = 100/176 (56%)

Query:    25 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSL-KEVTG-S 82
             ++YS  +  Y AAC   PDL+SFD+ IQ+RTS +I  L+   +  S+S  ++ KEV    
Sbjct:     9 SRYSEHVDAYRAACGHHPDLKSFDSKIQQRTSNLIDSLTVEAKTGSVSPHAVHKEVIDIH 68

Query:    83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
             L+E+++ V  VI EC +++W N  L  LV+DYF ++++TL     +  C+  A+  Q  I
Sbjct:    69 LVEVSKAVADVITECGEEVWENGTLQSLVKDYFNSTMETLKIFETVTQCVHEAKRGQRYI 128

Query:   143 QLAVKQFXXXXXXXXXXXXK-RYVRTLDELKKFKDAGDPFTEEFF-VLFQSVYKQQ 196
             + AV QF            K RY +TL+EL KFK  G+PF +      F+ + KQQ
Sbjct:   129 KAAVAQFKKDSEEKDVGVKKKRYGKTLEELMKFKAMGNPFDDGLLKTQFELMNKQQ 184

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095395 AT3G28270 "AT3G28270" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 101/360 (28%), Positives = 174/360 (48%)

Query:    31 LSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLS-FDSLKEVTGSLLEMNQE 89
             +S Y++AC   P L+SFDA++Q+RT+++I  L+   +  S S  D+  E++  L+E+ Q 
Sbjct:    16 MSAYKSACEEHPKLKSFDASLQQRTNKMIDSLTVEDKNGSSSPHDAHMELSKHLVEVTQG 75

Query:    90 VVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQF 149
             V   I E + D+W+NQ L  LV  YFE + KTL+    +ENC++ A   QL+I+ A+ +F
Sbjct:    76 VADFITEIEDDVWDNQALKYLVLAYFENTKKTLEIFKTIENCVENAEMGQLLIREALAEF 135

Query:   150 XXXXXXXXXXXXKR-YVRTLDELKKFKDAGDPFTEEFFVL-FQSVYKQQVXXXXXXXXXX 207
                         K+ Y +TL++LK FK+ GDPF  +     F+ + KQQ           
Sbjct:   136 EKESAEKDVGGKKKKYEKTLEDLKSFKEMGDPFDGKVLTTQFERIKKQQESLLEEVSETR 195

Query:   208 XXXXXXXXXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXXXXXGALAVPIGSVGK 267
                           +++NV+F +                         GALA P+ + G 
Sbjct:   196 KKIQDEISNLEKKTLITNVVFGAAFAIVAVASIALIATGVGAAAGF--GALAAPLLAAG- 252

Query:   268 WC------NSLWNSYEKALKGQK---ELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEAL 318
             W       +   ++  K L+G K   E+  +++ G        + + +LV+ LE +I+ +
Sbjct:   253 WAGVYTTLDKKKDALNKQLEGLKKVEEIEESVEKGIKTNEEATETVSILVDGLEDRIKNM 312

Query:   319 LNNADFALREED---VVKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKI 375
             L   D A+  ED     ++ + +I K++E   + I  + +  +  S+ I +AR  +LQKI
Sbjct:   313 LKLVDNAIDHEDNEAATRIVLTQISKKVEKLTKKITEVGESVEDHSKLIAKARLQVLQKI 372

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2830181 AT14A "AT3G28300" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 88/315 (27%), Positives = 141/315 (44%)

Query:    26 QYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFD---SLKEVTGS 82
             +YSA L  Y +AC   P+L+SFD+ +Q++TS +I+  ++  +   +      + KE T  
Sbjct:    10 KYSAHLRAYNSACGDHPELKSFDSELQQKTSNLINSFTSDAKTGLVPLPQHAAYKEFTKH 69

Query:    83 LLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLII 142
             L E+NQ+V   I+   + +W N  L  LVE YFE++ KTLD    +   +  A+  +  I
Sbjct:    70 LAEVNQQVSDYIIGYGEVVWENSTLRSLVETYFESAKKTLDIAENVTEYVDEAKRGERYI 129

Query:   143 QLAVKQFXXXXXXXXXXXXKRYVRTLDELKKFKDAGDPFT-EEFFVLFQSVYKQQVXXXX 201
               AV QF            KRY  TL ELKKF+  G+PF  ++F  LF+ ++K+Q     
Sbjct:   130 VAAVAQFEKDKENDVGKKTKRYENTLRELKKFEAMGNPFDGDKFTTLFKLMHKEQESLLE 189

Query:   202 XXXXXXXXXXXXX-------XXXXTWRMVSNVLFVSTXXXXXXXXXXXXXXXXXXXXXXX 254
                                      W ++SNVLF+                         
Sbjct:   190 RVRETKEKLDEELKNIEMEISSRKKWSIISNVLFIGAFVAVAVGSMVLVCTGVGAGVGVA 249

Query:   255 XGALAVPIGSVGKWC-------NSLW--NSYEKALKGQKELMSTMQIGAYVKIMDMDHIR 305
              G L++P+ ++G W        N +      E+ALK    + + M  G     +DM+ I 
Sbjct:   250 -GLLSLPLIAIG-WVGVHTILENKIQAREKQEEALKKAHRIANEMDKGMETDKVDMNSIS 307

Query:   306 VLVNKLEIQIEALLN 320
               V+ L+ +I ++LN
Sbjct:   308 GKVHALKSKITSMLN 322

GO:0005737 "cytoplasm" evidence=ISS;IDA;TAS

GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0008305 "integrin complex" evidence=ISS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0016337 "cell-cell adhesion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10QE9	U496A_ORYSJ	No assigned EC number	0.5819	0.9107	0.8943	yes	no
Q56XQ0	U496I_ARATH	No assigned EC number	0.6099	0.9868	0.9567	yes	no
A2XDK8	U496A_ORYSI	No assigned EC number	0.5819	0.9107	0.8943	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00025002001 SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (376 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	381
pfam05055	336	pfam05055, DUF677, Protein of unknown function (DU	1e-146
pfam05633	389	pfam05633, DUF793, Protein of unknown function (DU	6e-04

>gnl|CDD|218403 pfam05055, DUF677, Protein of unknown function (DUF677)

 Score =  416 bits (1071), Expect = e-146
 Identities = 188/337 (55%), Positives = 258/337 (76%), Gaps = 6/337 (1%)

Query: 44  LQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWN 103
           L+SFD+++Q+RT+ +I  L+ G +  SLS DSL EVT  LLEMNQ+VVKVI+E K+D+W 
Sbjct: 1   LKSFDSSLQQRTNFLISSLTTGAKTRSLSHDSLMEVTKCLLEMNQDVVKVIIESKEDVWE 60

Query: 104 NQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEV-VDEK 162
           NQDLF LV  YFE++ KTLDFC  LENC++RA  SQL+I+ AV QF++E   ++V   +K
Sbjct: 61  NQDLFSLVNVYFESTKKTLDFCETLENCVERAERSQLLIREAVAQFEKESLDKDVGKKKK 120

Query: 163 RYVRTLDELKKFKDAGDPFT-EEFFVLFQSVYKQQVLMLERLQKRKRKLDKKLKSMKTWR 221
           +Y +TL+ELKKFK  GDPF  EEF   FQSVYKQQVLMLE L+K K+KLDKKL+++KTWR
Sbjct: 121 KYEKTLEELKKFKAMGDPFDGEEFTTQFQSVYKQQVLMLEELRKTKKKLDKKLRNIKTWR 180

Query: 222 MVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALK 281
           ++SNV+FV+ FVAVL+ SVVAAA+ APP V  +AGALAVP+ +VGKW  S W  YE+ALK
Sbjct: 181 IISNVVFVAAFVAVLVLSVVAAAMGAPP-VVGVAGALAVPLEAVGKWVGSAWKKYEEALK 239

Query: 282 GQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDV---VKLAIEE 338
            QKE++S+M+ G  V + DM++I +LV++LE +I ++L   +FA+  E+    V++A++E
Sbjct: 240 RQKEIISSMEKGIQVNVKDMENISILVDRLESEITSMLKTVEFAVEHEENEVAVRIAMDE 299

Query: 339 IRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKI 375
           I+K++EV  E IE + + A KCS+ I + RTV+LQKI
Sbjct: 300 IKKKVEVLTEKIEEVGEEAAKCSKFIAKGRTVVLQKI 336

This family consists of AT14A like proteins from Arabidopsis thaliana. At14a has a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and localises partly to the plasma membrane. Length = 336

>gnl|CDD|218666 pfam05633, DUF793, Protein of unknown function (DUF793)

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 2/118 (1%)

Query: 40  LDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKK 99
           ++ +L+SF   + ER   ++    +  ++ SL +  L+++  S L   +E   ++   + 
Sbjct: 35  MEVELESFQRHVAERFIDLLSSSISSEDILSLEW--LRKLLDSFLCCEEEFRAILFNHRD 92

Query: 100 DIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQE 157
              +   L  LV +  + S+K LD C  + + +   R  Q + ++AV    +   L E
Sbjct: 93  TQISKPPLDRLVPEMLDRSVKALDVCNAVRDGIDSIRQWQKLAEIAVTALKQRRPLGE 150

This family consists of several plant proteins of unknown function. Length = 389

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
PF05055	336	DUF677: Protein of unknown function (DUF677); Inte	100.0
PF05633	389	DUF793: Protein of unknown function (DUF793); Inte	100.0
PF03087	231	DUF241: Arabidopsis protein of unknown function; I	98.18
PF05055	336	DUF677: Protein of unknown function (DUF677); Inte	86.98
TIGR02894	161	DNA_bind_RsfA transcription factor, RsfA family. I	86.42
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	81.58

>PF05055 DUF677: Protein of unknown function (DUF677); InterPro: IPR007749 This entry contains proteins belonging to the UPF0496 family, found in plants

Probab=100.00  E-value=3.8e-88  Score=663.37  Aligned_cols=331  Identities=57%  Similarity=0.879  Sum_probs=318.2

Q ss_pred             hhhhhHHHHHHHHhhhhhccCCcccCCCChhhHHHHHHhhhcCCHHHHHHHHhhcccccccchhhhhHHHHHHhhHHHHH
Q 016839           44 LQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLD  123 (381)
Q Consensus        44 l~sFd~~l~~r~~~~i~~l~~~~~~~~lSl~~~~~~~~~lLe~~qe~~~~il~~~~~~w~~~~l~~Lv~~YFd~S~kald  123 (381)
                      |++||++|++||+++|++|+.|++++++|+++|++++++||||+||++++||++++|+|++|+|++||++|||+|.+|||
T Consensus         1 l~~fd~~l~~~t~~~i~sl~~~~~~~s~s~~s~~~~t~~Lle~~Qevv~~ile~~~di~~~~~L~~Lv~~YFd~S~~a~~   80 (336)
T PF05055_consen    1 LQSFDSSLQERTNRVISSLATGVETRSLSFDSLKEVTECLLEMNQEVVKVILECKKDIWKNPELFRLVSDYFDSSLEASD   80 (336)
T ss_pred             CCCccHHHHHHHHHHHHHhhhccccCCCChHHHHHHHHHHhCCChHHHHHHHHHHHHhhcChhHHHHHHHHHHhhHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhHHHHHHHhhccchhhhhh-hccHHHHHHHHHHHHhhHhcCCCCCHH-HhhHHHHHHHhHHHHHH
Q 016839          124 FCTVLENCLKRARNSQLIIQLAVKQFDEEVELQE-VVDEKRYVRTLDELKKFKDAGDPFTEE-FFVLFQSVYKQQVLMLE  201 (381)
Q Consensus       124 iC~aL~~~I~~~R~~~~~i~~al~~l~~~~~~~~-~~~~~~~~ra~~~L~~f~~~~npf~~~-~~~~f~~~~~~~~~ll~  201 (381)
                      ||++|++||+|+|.+|++|+.+|+.|+.++.++| |.++++|.+|+++|++|+.++|||+++ ++++|+.||++|++|++
T Consensus        81 ~C~~L~k~I~~aR~~~~~I~~al~~~~~e~~~~d~g~~~~~~~~tl~eL~~F~~~~NPFs~~~~~~~F~~i~~~~~~Ll~  160 (336)
T PF05055_consen   81 FCEALLKCIHRARDNYLPIRRALKQFEKESLDTDVGVSQKKYDKTLEELKKFKAAGNPFSDEEFFHQFQSIHDQQSSLLE  160 (336)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhhccccccccccchhHHHHHHHHHhhhhcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988764333 346899999999999999999999999 88999999999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHHhhcChhHHHhhhcccccccccccchhhHHHHHHHHHh
Q 016839          202 RLQKRKRKLDKKLKSMKTWRMVSNVLFVSTFVAVLIFSVVAAAIAAPPLVTALAGALAVPIGSVGKWCNSLWNSYEKALK  281 (381)
Q Consensus       202 ~l~s~~~kl~~kL~~~r~~~~~s~~~~~~~~~~v~V~~vv~aai~~~~~~~ala~~~~~p~~~~~~W~~~~~~~~e~al~  281 (381)
                      +|+++++|+++|+++.|+|+++++++|++++++|+|++||+|||++|+++ |+|+++++|++++++|++++|++|+++++
T Consensus       161 kL~~~k~Kl~kklk~~r~~~kvs~v~fvaa~~aV~i~svv~aa~a~~~vv-~~aa~~a~P~~~~gkw~~~~~~k~~~al~  239 (336)
T PF05055_consen  161 KLDSRKKKLRKKLKLVRTWRKVSNVCFVAAFVAVAIASVVAAAHAVPAVV-ALAAALAAPIGSVGKWCGSLWKKYEEALK  239 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHccchHHHhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999887765 57788899999999999999999999999


Q ss_pred             hhHHhhhhhhcchhHHHhhhhhHHHHHHHHHHHHHhHhhhhhhhhhhhhH---HHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 016839          282 GQKELMSTMQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNADFALREEDV---VKLAIEEIRKRLEVFMETIEVLCDHAD  358 (381)
Q Consensus       282 ~q~e~~~~~~kGt~illkdldti~~lV~rL~~~ie~~~~~v~f~l~~~~~---v~~~v~eL~k~~~~~~~~Ld~Lee~V~  358 (381)
                      +|.+.+++|+|||||+++|||||++||+||+++|||++++|+||++++++   ++++|+||+|+++.|+++|||||||||
T Consensus       240 ~~~~~l~~aakGtyI~~~DldTIsrLV~RL~deIE~~~~~v~fave~~~d~~~vk~vv~el~k~~~~f~~qleELeehv~  319 (336)
T PF05055_consen  240 KQKEQLDAAAKGTYILIKDLDTISRLVDRLEDEIEHMKALVDFAVERGEDEEAVKEVVKELKKNVESFTEQLEELEEHVY  319 (336)
T ss_pred             HHHHHHHHHHhccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999874   999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 016839          359 KCSRDIRRARTVILQKI  375 (381)
Q Consensus       359 ~cf~~I~raR~~vL~~I  375 (381)
                      +||++|||||++||++|
T Consensus       320 lC~~tInrAR~lVlq~I  336 (336)
T PF05055_consen  320 LCFKTINRARTLVLQEI  336 (336)
T ss_pred             HHHHHHHHHHHHHHhhC
Confidence            99999999999999997

This family includes AT14A like proteins from Arabidopsis thaliana. At14a contains a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and the protein localises partly to the plasma membrane [].

>PF05633 DUF793: Protein of unknown function (DUF793); InterPro: IPR008511 This entry includes Protein BYPASS 1 which is required for normal root and shoot development

Probab=100.00  E-value=3.9e-57  Score=447.14  Aligned_cols=318  Identities=21%  Similarity=0.269  Sum_probs=263.7

Q ss_pred             hhCCchhhhhHHHHHHHHhhhhhccCCc-ccCCCChhhHHHHHHhhhcCCHHHHHHHHhhcccccccchhhhhHHHHHHh
Q 016839           39 RLDPDLQSFDATIQERTSRVIHKLSAGV-EVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFET  117 (381)
Q Consensus        39 ~~~~~l~sFd~~l~~r~~~~i~~l~~~~-~~~~lSl~~~~~~~~~lLe~~qe~~~~il~~~~~~w~~~~l~~Lv~~YFd~  117 (381)
                      +..++|++||+++.+|++.+..   ++. ..+.||++|++++++.||++|.|+..+|++.....-.+|+++++|++|||+
T Consensus        34 ~~~~~L~~Fq~~va~rl~~L~~---~~~~~~~~LSL~W~~~~ld~~l~~~~efr~li~~~~~~~~s~~~~dk~v~eylD~  110 (389)
T PF05633_consen   34 SLEAELEAFQRHVAERLSDLSP---SSKDSDDFLSLSWMRKALDSFLCCHEEFRALITNLRDLPLSKPPDDKWVDEYLDR  110 (389)
T ss_pred             cchhhHHHHHHHHHHHHHHhcc---CcCcccccccHHHHHHHHHHHHHHHHHHHHHHhcccccccCCchHHHHHHHHHHH
Confidence            4567899999999999999754   222 247899999999999999977777777777754244568899999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccchhhhhhhccHHHHHHHHHHHHhhHhcCC-CCCHH---HhhHHHHHH
Q 016839          118 SIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGD-PFTEE---FFVLFQSVY  193 (381)
Q Consensus       118 S~kaldiC~aL~~~I~~~R~~~~~i~~al~~l~~~~~~~~~~~~~~~~ra~~~L~~f~~~~n-pf~~~---~~~~f~~~~  193 (381)
                      |+|+|||||+++++|+++|+||+++++|+++|+...    +++++|++||+++|.++..++. ..+..   ..++.+++.
T Consensus       111 sVKlLDvCNA~~~gi~~lr~~~~ll~~al~~L~~~~----~~~~~~~rRAr~aL~dl~~~~~~~~~~~~~~~~~rnrs~~  186 (389)
T PF05633_consen  111 SVKLLDVCNAIRDGISQLRQWQLLLQIALHALDSSR----PLGEGQLRRARKALSDLKIAMLDDKDSGSSGGSHRNRSFG  186 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcHHHHHHHHHHHHHHHHHHhcccccCcccccccccccc
Confidence            999999999999999999999999999999998863    3899999999999999996442 11111   112222211


Q ss_pred             H---------------------hHHHHHHHHHH---HHHHHhhhhhhhhhh-----hhHhhHHHHHHHHHHHHHHHHHHH
Q 016839          194 K---------------------QQVLMLERLQK---RKRKLDKKLKSMKTW-----RMVSNVLFVSTFVAVLIFSVVAAA  244 (381)
Q Consensus       194 ~---------------------~~~~ll~~l~s---~~~kl~~kL~~~r~~-----~~~s~~~~~~~~~~v~V~~vv~aa  244 (381)
                      +                     ..+--+.+.||   +++.|+.+|..||+.     +++++++|+|++++|||||++|||
T Consensus       187 r~~~~~~~~~~s~~~~~~~~~rsls~~vsr~wsa~~~Lq~m~~nL~~Pk~~esak~~gL~~A~Y~m~~vtvFV~~vlVAA  266 (389)
T PF05633_consen  187 RSNSSGRRSSSSSGSRSAGHFRSLSWSVSRNWSAARQLQAMGENLVLPKGKESAKGRGLLRAMYGMKSVTVFVCWVLVAA  266 (389)
T ss_pred             cccCCCCCCCCccccCCcccchhhhhhhhhhhhhHHHHHHHHhcCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHe
Confidence            1                     11123566776   666688999999988     469999999999999999999999


Q ss_pred             hhcChhHHHhhhccc-ccccccccchhhHHHHHHHHHhhhHHhhhh-hhcchhHHHhhhhhHHHHHHHHHHHHHhHhhhh
Q 016839          245 IAAPPLVTALAGALA-VPIGSVGKWCNSLWNSYEKALKGQKELMST-MQIGAYVKIMDMDHIRVLVNKLEIQIEALLNNA  322 (381)
Q Consensus       245 i~~~~~~~ala~~~~-~p~~~~~~W~~~~~~~~e~al~~q~e~~~~-~~kGt~illkdldti~~lV~rL~~~ie~~~~~v  322 (381)
                      +||+++  ++..++. +|  ..+.|++++..+|++ |+++   +++ ..||++++++||+.|+++|++|++.|+    .+
T Consensus       267 ~pc~~r--gL~~~l~~vP--~~~~WA~s~~~LQ~r-I~eE---ikkk~~kgs~gLLkEl~~ve~~vr~L~el~d----~~  334 (389)
T PF05633_consen  267 FPCQDR--GLQVHLSAVP--RQFSWAPSFISLQER-INEE---IKKKERKGSCGLLKELQQVEASVRELHELID----SF  334 (389)
T ss_pred             eecCCc--cccCCCCCCc--cccccchHHHHHHHH-HHHH---HhhccccCcchHHHHHHHHHHHHHHHHHHHH----hc
Confidence            999998  4545555 45  589999999999999 8853   555 558899999999999999999999998    47


Q ss_pred             hhhhhhhhH--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016839          323 DFALREEDV--VKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQKI  375 (381)
Q Consensus       323 ~f~l~~~~~--v~~~v~eL~k~~~~~~~~Ld~Lee~V~~cf~~I~raR~~vL~~I  375 (381)
                      +|++++++.  +++.|+||.+.++.|++||||||+||+++||+|+++|+++|+.|
T Consensus       335 ~~p~~~e~~~ev~~~V~EL~~~~~~L~~GLdpLerqVre~Fh~IV~sR~elLd~l  389 (389)
T PF05633_consen  335 QFPLEEEKEEEVREAVEELARVCEALSQGLDPLERQVREVFHRIVRSRTELLDSL  389 (389)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhHHHHhcC
Confidence            999988765  99999999999999999999999999999999999999999864

Prevents constitutive production of a root mobile carotenoid-derived signaling compound that is capable of arresting shoot and leaf development [, ].

>PF03087 DUF241: Arabidopsis protein of unknown function; InterPro: IPR004320 This family represents plant proteins of unknown function

Probab=98.18  E-value=0.0014  Score=62.23  Aligned_cols=62  Identities=21%  Similarity=0.408  Sum_probs=47.0

Q ss_pred             HHHHHhhhcCCHHHHHHHHhhcccccccchhhhhHHHHHHhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Q 016839           77 KEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQ  148 (381)
Q Consensus        77 ~~~~~~lLe~~qe~~~~il~~~~~~w~~~~l~~Lv~~YFd~S~kaldiC~aL~~~I~~~R~~~~~i~~al~~  148 (381)
                      -..++-||. .+.+-..+.... .+|        |++.+|.|+..+|+|++.++.+-+.+....=+|.+|..
T Consensus        10 y~~~~ell~-lp~tq~al~~~~-~k~--------ve~lLd~sL~LLD~c~~~rd~ll~lKe~v~eLqsalRR   71 (231)
T PF03087_consen   10 YECLEELLQ-LPSTQQALSHHQ-EKW--------VEELLDGSLRLLDACGTFRDALLQLKEHVQELQSALRR   71 (231)
T ss_pred             HHHHHHHHc-CCHHHHHHHHHH-HHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            334444554 233333444444 566        99999999999999999999999999999999999874

>PF05055 DUF677: Protein of unknown function (DUF677); InterPro: IPR007749 This entry contains proteins belonging to the UPF0496 family, found in plants

Probab=86.98  E-value=36  Score=34.25  Aligned_cols=18  Identities=22%  Similarity=0.152  Sum_probs=9.1

Q ss_pred             hHHHHHHHHHHHHHHHhh
Q 016839          195 QQVLMLERLQKRKRKLDK  212 (381)
Q Consensus       195 ~~~~ll~~l~s~~~kl~~  212 (381)
                      ++..+-++..+.+++++.
T Consensus       147 ~F~~i~~~~~~Ll~kL~~  164 (336)
T PF05055_consen  147 QFQSIHDQQSSLLEKLDS  164 (336)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            344444555555555553

This family includes AT14A like proteins from Arabidopsis thaliana. At14a contains a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and the protein localises partly to the plasma membrane [].

>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family

Probab=86.42  E-value=17  Score=32.76  Aligned_cols=42  Identities=19%  Similarity=0.257  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016839          332 VKLAIEEIRKRLEVFMETIEVLCDHADKCSRDIRRARTVILQ  373 (381)
Q Consensus       332 v~~~v~eL~k~~~~~~~~Ld~Lee~V~~cf~~I~raR~~vL~  373 (381)
                      ++.-+++|.+..+.+.+.+..+++.-...+..++|+|.+++.
T Consensus       116 l~~~~e~Le~e~~~L~~~~~~~~eDY~~L~~Im~RARkl~~~  157 (161)
T TIGR02894       116 LQKRNEELEKELEKLRQRLSTIEEDYQTLIDIMDRARKLAVV  157 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            666777777777788888888899999999999999998763

In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=81.58  E-value=40  Score=30.40  Aligned_cols=24  Identities=21%  Similarity=0.375  Sum_probs=14.6

Q ss_pred             HHhhhhhHHHHHHHHHHHHHhHhh
Q 016839          297 KIMDMDHIRVLVNKLEIQIEALLN  320 (381)
Q Consensus       297 llkdldti~~lV~rL~~~ie~~~~  320 (381)
                      +-+++++++..+..+...++....
T Consensus        93 l~~el~~l~~~~~~~~~~l~~~~~  116 (191)
T PF04156_consen   93 LQEELDQLQERIQELESELEKLKE  116 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            446666666666666666654433

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	381
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 1e-08
 Identities = 61/429 (14%), Positives = 129/429 (30%), Gaps = 114/429 (26%)

Query: 13  DAPSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLS 72
           D    P  +++  +      +  +   +   L+ F  T+  +   ++ K    V   +  
Sbjct: 37  DVQDMPKSILSKEEID---HIIMSKDAVSGTLRLFW-TLLSKQEEMVQKFVEEVLRINYK 92

Query: 73  F--DSLKEVTGSLLEMNQE--VVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVL 128
           F    +K       E  Q   + ++ +E +  ++N+  +F     Y  + ++       L
Sbjct: 93  FLMSPIKT------EQRQPSMMTRMYIEQRDRLYNDNQVF---AKYNVSRLQPY---LKL 140

Query: 129 ENCLKRARNSQLII----------QLAVKQ-FDEEVELQ---EV--VDEKRYVRTLDELK 172
              L   R ++ ++           +A+      +V+ +   ++  ++ K        L+
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 173 KFKDAGDPFTEEFFVLFQSVYKQQV-------LMLERLQKRKRKL--DKKLK-------- 215
             +                 +  +        L +  +Q   R+L   K  +        
Sbjct: 201 MLQK--------LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 216 --SMKTWRMVSN---VLFVSTFVAVLIFSVVAAAIAAPPLVTALAG-----ALAVPIGSV 265
             + K W   +    +L  + F  V    + AA      L             ++    +
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSL----L 307

Query: 266 GKWCNSLWNSYEK----ALKGQKELMSTMQIGAYVKIMDMDHI----RVLVNKLEIQIEA 317
            K+   L    +      L      +S   I   ++   +        V  +KL   IE+
Sbjct: 308 LKY---LDCRPQDLPREVLTTNPRRLS--IIAESIRDG-LATWDNWKHVNCDKLTTIIES 361

Query: 318 LLNNADFALREEDVVKLAIEEIRKR---LEVFME----TIEVLCDH-ADKCSRDIRRART 369
            LN             L   E RK    L VF         +L     D    D+     
Sbjct: 362 SLNV------------LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM---- 405

Query: 370 VILQKIIKY 378
           V++ K+ KY
Sbjct: 406 VVVNKLHKY 414

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 37/275 (13%), Positives = 86/275 (31%), Gaps = 81/275 (29%)

Query: 141 IIQLAVKQFDEEVELQEVVDEKRYVRTLDELKKFKDAGDPFTEEFFVLF-------QSVY 193
           I+ +    F +  + ++V D  + + + +E+     + D        LF       + + 
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA-VSGTLRLFWTLLSKQEEMV 79

Query: 194 KQQV---------LMLERLQKRKRKLDKKLKSMKTWRMVS--------NVLFVSTFVAVL 236
           ++ V          ++  ++  +R+      SM T   +         N +F    V   
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQ-----PSMMTRMYIEQRDRLYNDNQVFAKYNV--- 131

Query: 237 IFSVVAAAIAAPPLVTALAGAL--AVPIGSV--------GKWCNSLWNSYEKALKGQKEL 286
                    +       L  AL    P  +V        GK    +            ++
Sbjct: 132 ---------SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW--VALD---VCL-SYKV 176

Query: 287 MSTMQIGAY-VKIMDMDHIRVLV---NKLEIQIEA-LLNNADFALREEDVVKLAIEEIRK 341
              M    + + + + +    ++    KL  QI+    + +D +      +KL I  I+ 
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSIQA 232

Query: 342 RLEVFMETIE------VLCDHADKCSRDIRRARTV 370
            L   +++        VL         +++ A+  
Sbjct: 233 ELRRLLKSKPYENCLLVL--------LNVQNAKAW 259

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00