Citrus Sinensis ID: 016868
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | 2.2.26 [Sep-21-2011] | |||||||
| O82616 | 324 | Putative fructokinase-5 O | no | no | 0.811 | 0.953 | 0.674 | 1e-120 | |
| Q0J8G4 | 336 | Fructokinase-2 OS=Oryza s | no | no | 0.811 | 0.919 | 0.670 | 1e-120 | |
| A2YQL4 | 336 | Fructokinase-2 OS=Oryza s | N/A | no | 0.811 | 0.919 | 0.670 | 1e-120 | |
| Q9LNE3 | 329 | Probable fructokinase-2 O | no | no | 0.803 | 0.930 | 0.667 | 1e-120 | |
| Q9M1B9 | 326 | Probable fructokinase-4 O | no | no | 0.821 | 0.960 | 0.649 | 1e-119 | |
| Q9LNE4 | 345 | Probable fructokinase-3 O | no | no | 0.816 | 0.901 | 0.650 | 1e-118 | |
| Q42896 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.824 | 0.957 | 0.638 | 1e-117 | |
| Q7XJ81 | 328 | Fructokinase-2 OS=Solanum | N/A | no | 0.824 | 0.957 | 0.638 | 1e-116 | |
| Q9SID0 | 325 | Probable fructokinase-1 O | no | no | 0.803 | 0.941 | 0.648 | 1e-116 | |
| Q0JGZ6 | 323 | Fructokinase-1 OS=Oryza s | no | no | 0.834 | 0.984 | 0.633 | 1e-115 |
| >sp|O82616|SCRK5_ARATH Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/310 (67%), Positives = 246/310 (79%), Gaps = 1/310 (0%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
+PL+V FGEMLIDFVP SG+SLAES F KAPGGAPANVA I +LGG SAFIGK G
Sbjct: 3 NTPLIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGD 62
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFG+ML +ILK+N VN G+ FD ARTALAFVTL+ DGEREFMFYRNPSADMLL+E+E
Sbjct: 63 DEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESE 122
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L+ LI KAKIFHYGSISLI+EPC++AH+AA K AKDAGV+LSYDPN+RLPLWPS + A
Sbjct: 123 LNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAI 182
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
EGI SIW ADIIK+S++E++FLT+G+ DD VV L H LKLL+VT+G GCRYYTK
Sbjct: 183 EGIKSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLSLMHDKLKLLIVTDGEKGCRYYTK 241
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
F GRV G V+AVD TGAGD+FV L L D S+L E +L++AL FANACGA+
Sbjct: 242 KFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTT 301
Query: 359 ERGAIPALPT 368
++GAIPALPT
Sbjct: 302 QKGAIPALPT 311
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4 |
| >sp|Q0J8G4|SCRK2_ORYSJ Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 248/310 (80%), Gaps = 1/310 (0%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
E LVV FGEMLIDFVP V+G+SLAES F KAPGGAPANVA I++LGGSSAF+GK G
Sbjct: 15 EPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGD 74
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFG+ML DILK+N VN G FD ARTALAFVTL+S+GEREFMFYRNPSADMLL EAE
Sbjct: 75 DEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAE 134
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L+L LI +AKIFHYGSISLITEPC+SAH+AA +AAK AG++ SYDPN+RLPLWPS D AR
Sbjct: 135 LNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAAR 194
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
GILSIW+ AD IK+S++E++FLTQG D D+ V L+ LKLL+VT+G GCRY+TK
Sbjct: 195 AGILSIWKEADFIKVSDDEVAFLTQG-DANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTK 253
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
DF G V G V VD TGAGDAFV +L ++ D S+ E++LR+AL+F+NACGA+
Sbjct: 254 DFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTT 313
Query: 359 ERGAIPALPT 368
++GAIPALPT
Sbjct: 314 KKGAIPALPT 323
|
May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|A2YQL4|SCRK2_ORYSI Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 248/310 (80%), Gaps = 1/310 (0%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
E LVV FGEMLIDFVP V+G+SLAES F KAPGGAPANVA I++LGGSSAF+GK G
Sbjct: 15 EPNLVVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGD 74
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFG+ML DILK+N VN G FD ARTALAFVTL+S+GEREFMFYRNPSADMLL EAE
Sbjct: 75 DEFGHMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAE 134
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L+L LI +AKIFHYGSISLITEPC+SAH+AA +AAK AG++ SYDPN+RLPLWPS D AR
Sbjct: 135 LNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRAAKSAGILCSYDPNVRLPLWPSEDAAR 194
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
GILSIW+ AD IK+S++E++FLTQG D D+ V L+ LKLL+VT+G GCRY+TK
Sbjct: 195 AGILSIWKEADFIKVSDDEVAFLTQG-DANDEKNVLSLWFDGLKLLIVTDGEKGCRYFTK 253
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
DF G V G V VD TGAGDAFV +L ++ D S+ E++LR+AL+F+NACGA+
Sbjct: 254 DFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTT 313
Query: 359 ERGAIPALPT 368
++GAIPALPT
Sbjct: 314 KKGAIPALPT 323
|
May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/307 (66%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEF 121
LVV FGEMLIDFVPT SG+SL+ES F KAPGGAPANVA+ ++RLGG +AF+GK+G DEF
Sbjct: 11 LVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEF 70
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G+MLA IL++N+V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+ EL+L
Sbjct: 71 GHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 130
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
LI AK+FHYGSISLITEPC+SAH+ A + AK+AG +LSYDPNLR PLWPS ++AR+ I
Sbjct: 131 ELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQI 190
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+SIW+ ADIIK+S+ E+ FLT G DD L+H NLKLLLVT G +GCRYYTKDF
Sbjct: 191 MSIWDKADIIKVSDVELEFLT-GNKTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFH 249
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
G V+ V+AVD TGAGD+FV +L+Q+ D S+L++E++LR LRFANACGA+T ++G
Sbjct: 250 GSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKG 309
Query: 362 AIPALPT 368
AIPALPT
Sbjct: 310 AIPALPT 316
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/314 (64%), Positives = 251/314 (79%), Gaps = 1/314 (0%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
E L+V FGEMLIDFVPTVSG+SLA++P F KAPGGAPANVA+ I+RLGG +AF+GK+G
Sbjct: 7 EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGD 66
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFG+MLA ILK+N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+ E
Sbjct: 67 DEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDE 126
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L+L +I AK+FHYGSISLI EPC+SAH+ A + AK+AG +LSYDPNLRLPLWPS ++A+
Sbjct: 127 LNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQ 186
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
+ ILSIW+ A++IK+S+EE+ FLT G D DD L+H+NLKLLLVT G GCRYYTK
Sbjct: 187 KQILSIWDKAEVIKVSDEELMFLT-GSDKVDDETALSLWHSNLKLLLVTLGEKGCRYYTK 245
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
F G V V+AVD TGAGD+FV +L ++ D ++L+ E +LR+ LR ANACGA+T
Sbjct: 246 SFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTT 305
Query: 359 ERGAIPALPTREAV 372
++GAIPALPT V
Sbjct: 306 KKGAIPALPTESEV 319
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9LNE4|SCRK3_ARATH Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/312 (65%), Positives = 248/312 (79%), Gaps = 1/312 (0%)
Query: 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKV 116
T E L+V FGEMLIDFVPTVSG+SL+ESP F KAPGGAPANVA+ ++RLGG +AF+GK+
Sbjct: 5 TGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKL 64
Query: 117 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE 176
G D+FG+MLA IL++N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+
Sbjct: 65 GDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRP 124
Query: 177 AELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADK 236
EL+L LI AK+FHYGSISLITEPC+SAH+ A + AK+AG +LSYDPNLR PLWPS ++
Sbjct: 125 DELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEE 184
Query: 237 AREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296
AR I+SIW+ ADIIK+S+ E+ FLT+ + DD L+H NLKLLLVT G GC Y+
Sbjct: 185 ARTQIMSIWDKADIIKVSDVELEFLTENK-TMDDKTAMSLWHPNLKLLLVTLGEKGCTYF 243
Query: 297 TKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356
TK F G V+ V+AVD TGAGD+FV +L Q+ D S+L+ E +LR LRFANACGA+T
Sbjct: 244 TKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAIT 303
Query: 357 VMERGAIPALPT 368
++GAIPALPT
Sbjct: 304 TTKKGAIPALPT 315
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/315 (63%), Positives = 247/315 (78%), Gaps = 1/315 (0%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
S L+V FGEMLIDFVPTVSG+SLAE+P F KAPGGAPANVA+ + RLGG SAF+GK+G D
Sbjct: 9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDD 68
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
EFG+MLA ILK N V G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL AEL
Sbjct: 69 EFGHMLAGILKTNGVQAEGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAEL 128
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
+L LI AK+FHYGSISLI EPC++AH+ A + AK+AG +LSYDPNLRLPLWPSA++A++
Sbjct: 129 NLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKK 188
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
I SIW++AD+IK+S+ E+ FLT G + DD L+H NLKLLLVT G GC YYTK
Sbjct: 189 QIKSIWDSADVIKVSDVELEFLT-GSNKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKK 247
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
F G V G V+ VD TGAGD+FV +L+++ D ++L+ E +L++ LRF+ ACGA+T +
Sbjct: 248 FHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTK 307
Query: 360 RGAIPALPTREAVLN 374
+GAIPALPT L
Sbjct: 308 KGAIPALPTASEALT 322
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/315 (63%), Positives = 246/315 (78%), Gaps = 1/315 (0%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
S L+V FGEMLIDFVPTVSG+SLAE+P F KAPGGAPANVA+ + RLGG SAF+GK+G D
Sbjct: 9 SGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGRSAFVGKLGDD 68
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
EFG+MLA ILK N V G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL AEL
Sbjct: 69 EFGHMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPAEL 128
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
+L LI AK+FHYGSISLI EPC++AH+ A + AK+AG +LSYDPNLRLPLWPSA++A++
Sbjct: 129 NLDLIRSAKVFHYGSISLIVEPCRAAHMKAMEVAKEAGALLSYDPNLRLPLWPSAEEAKK 188
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
I SIW++AD+IK+S+ E+ FLT G + DD L+H NLKLLLVT G GC YYTK
Sbjct: 189 QIKSIWDSADVIKVSDVELEFLT-GSNKIDDESAMSLWHPNLKLLLVTLGEKGCNYYTKK 247
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
F G V G V+ VD TGAGD+FV +L+++ D ++L E +L++ LRF+ ACGA+T +
Sbjct: 248 FHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTK 307
Query: 360 RGAIPALPTREAVLN 374
+GAIPALPT L
Sbjct: 308 KGAIPALPTASEALT 322
|
May play an important role in maintaining the flux of carbon towards starch formation. Solanum habrochaites (taxid: 62890) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 245/307 (79%), Gaps = 1/307 (0%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEF 121
L+V FGEMLIDFVPT SG+SLAE+P F KAPGGAPANVA+ ++RLGG SAF+GK+G DEF
Sbjct: 9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEF 68
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G+MLA IL++N V+ G+ FD GARTALAFVTLR+DG+REFMFYRNPSADMLL+ EL+L
Sbjct: 69 GHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPDELNL 128
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
LI AK+FHYGSISLI EPC+SAH+ A + AK+AG +LSYDPNLR PLWPS ++A+ I
Sbjct: 129 DLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQI 188
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+SIW+ A+IIK+S+ E+ FLT G + DD L+H NLKLLLVT G GCRYYTK F
Sbjct: 189 MSIWDKAEIIKVSDVELEFLT-GSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTKTFK 247
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
G V V AVD TGAGD+FV +L+Q+ D S+L+ E++LR LRFANACGA+T ++G
Sbjct: 248 GAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKG 307
Query: 362 AIPALPT 368
AIPALP+
Sbjct: 308 AIPALPS 314
|
May play an important role in maintaining the flux of carbon towards starch formation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q0JGZ6|SCRK1_ORYSJ Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/319 (63%), Positives = 250/319 (78%), Gaps = 1/319 (0%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
S LVV FGEMLIDFVPTV+G+SLAE+PAF KAPGGAPANVA+ +ARLGG +AF+GK+G D
Sbjct: 5 SELVVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDD 64
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
EFG MLA IL++N V+ G+ FD GARTALAFVTLR+DGEREFMFYRNPSADMLL AEL
Sbjct: 65 EFGRMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAEL 124
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
++ LI +A +FHYGSISLI EPC+SAH+ A + AK+AG +LSYDPNLR LWPS ++AR
Sbjct: 125 NVELIKRAAVFHYGSISLIAEPCRSAHLRAMEIAKEAGALLSYDPNLREALWPSREEART 184
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
ILSIW+ ADI+K+SE E+ FLT G D +D VV KL+ +KLLLVT G GC+YY +D
Sbjct: 185 KILSIWDQADIVKVSEVELEFLT-GIDSVEDDVVMKLWRPTMKLLLVTLGDQGCKYYARD 243
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
F G V KV+ VD TGAGDAFV +L ++ D S LQ + +L +A++FANACGA+T +
Sbjct: 244 FRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATK 303
Query: 360 RGAIPALPTREAVLNAIHA 378
+GAIP+LPT VL + +
Sbjct: 304 KGAIPSLPTEVEVLKLMES 322
|
May play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| 358248484 | 383 | uncharacterized protein LOC100797023 [Gl | 0.986 | 0.981 | 0.832 | 1e-172 | |
| 384255902 | 386 | fructokinase [Eriobotrya japonica] | 0.992 | 0.979 | 0.778 | 1e-169 | |
| 357492165 | 386 | Fructokinase-2 [Medicago truncatula] gi| | 0.989 | 0.976 | 0.807 | 1e-167 | |
| 224077293 | 351 | predicted protein [Populus trichocarpa] | 0.902 | 0.980 | 0.789 | 1e-166 | |
| 408362891 | 386 | fructokinase [Malus x domestica] | 0.992 | 0.979 | 0.789 | 1e-165 | |
| 388506420 | 386 | unknown [Medicago truncatula] | 0.989 | 0.976 | 0.802 | 1e-164 | |
| 393395652 | 388 | FRK3 [Gossypium herbaceum] | 0.973 | 0.956 | 0.794 | 1e-164 | |
| 22330456 | 384 | fructokinase [Arabidopsis thaliana] gi|1 | 0.986 | 0.979 | 0.767 | 1e-163 | |
| 418731477 | 389 | fructokinase 3 [Solanum tuberosum] | 0.994 | 0.974 | 0.792 | 1e-163 | |
| 225453158 | 384 | PREDICTED: probable fructokinase-2 [Viti | 0.976 | 0.968 | 0.804 | 1e-162 |
| >gi|358248484|ref|NP_001240145.1| uncharacterized protein LOC100797023 [Glycine max] gi|255641428|gb|ACU20990.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 323/388 (83%), Positives = 346/388 (89%), Gaps = 12/388 (3%)
Query: 1 MALHSTAFCFTGAVSSYSHSSVKLSTHPTIKASS-------PLPRLNVRVKALPGDGLSE 53
MALH FCF V+S+ SSVKLS PTIKASS PL +LNVR KA PGDG
Sbjct: 1 MALHCGTFCFW-TVASHPPSSVKLS-QPTIKASSFSSPLAPPLVKLNVRGKAFPGDG--- 55
Query: 54 TKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFI 113
T ET+ESPLVVCFGEMLIDFVPTV+GLSLAE+PAFKKA GGAPANVAVGI+RLGGSSAFI
Sbjct: 56 TPETKESPLVVCFGEMLIDFVPTVNGLSLAEAPAFKKAAGGAPANVAVGISRLGGSSAFI 115
Query: 114 GKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 173
GKVG DEFGYMLA+ILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML
Sbjct: 116 GKVGEDEFGYMLANILKENNVNNEGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 175
Query: 174 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS 233
LQE ELDL LI KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS
Sbjct: 176 LQEDELDLDLIRKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS 235
Query: 234 ADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293
AD AREGILSIWETADIIKISEEEISFLT+GE+PYDDAVV+KLFH +LKLLLVTEG +GC
Sbjct: 236 ADSAREGILSIWETADIIKISEEEISFLTKGENPYDDAVVHKLFHPSLKLLLVTEGAEGC 295
Query: 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353
RYYTK+FSGRV+GLKV+AVD TGAGDAFVAGILSQL+ D S+LQ ED+LRD+L+FAN CG
Sbjct: 296 RYYTKEFSGRVKGLKVDAVDTTGAGDAFVAGILSQLAVDLSILQNEDELRDSLKFANVCG 355
Query: 354 ALTVMERGAIPALPTREAVLNAIHAPVS 381
ALTV ERGAIPALPT+EAVLNA+ PVS
Sbjct: 356 ALTVTERGAIPALPTKEAVLNAMLKPVS 383
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384255902|gb|ADZ96381.2| fructokinase [Eriobotrya japonica] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 303/389 (77%), Positives = 330/389 (84%), Gaps = 11/389 (2%)
Query: 1 MALHSTAFCFTGAVS------SYSHSSVKLSTHPTIKASSP--LPRLNVRVKALPGDGLS 52
MALH+TAFCF G VS S+S +V+ S + S + NV+ KA GD L
Sbjct: 1 MALHATAFCFGGVVSLPRNSVSFSQRTVRASAFSSPPPLSSSSIAISNVQGKAFAGDALP 60
Query: 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAF 112
+TKE S LVVCFGEMLIDFVPT +GLSLAE+PAFKKA GGAPANVAVGIARLGGSSAF
Sbjct: 61 DTKE---SSLVVCFGEMLIDFVPTSNGLSLAETPAFKKAAGGAPANVAVGIARLGGSSAF 117
Query: 113 IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 172
IGKVG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLRSDGEREF+FYRNPSADM
Sbjct: 118 IGKVGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVTLRSDGEREFLFYRNPSADM 177
Query: 173 LLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWP 232
LLQEAELD +LI KAKI HYGSISLITEPCKSAHIAA KAAKDAGVVLSYDPN+RLPLWP
Sbjct: 178 LLQEAELDFALIRKAKILHYGSISLITEPCKSAHIAATKAAKDAGVVLSYDPNVRLPLWP 237
Query: 233 SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292
SA AREGILSIW+TAD+IKISEEEISFLT+GEDPYD+ VV KL+H NLKLLLVTEGPDG
Sbjct: 238 SAKSAREGILSIWDTADVIKISEEEISFLTEGEDPYDENVVRKLYHPNLKLLLVTEGPDG 297
Query: 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 352
CRYYTK+FSGRV+G+KV+AVD TGAGDAFVAGILSQL+ D SL Q ED+LRDAL FANAC
Sbjct: 298 CRYYTKEFSGRVEGMKVDAVDTTGAGDAFVAGILSQLAVDLSLHQDEDKLRDALLFANAC 357
Query: 353 GALTVMERGAIPALPTREAVLNAIHAPVS 381
GALTV RGAIPALPTRE+VLN + V+
Sbjct: 358 GALTVTGRGAIPALPTRESVLNVLLKSVA 386
|
Source: Eriobotrya japonica Species: Eriobotrya japonica Genus: Eriobotrya Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357492165|ref|XP_003616371.1| Fructokinase-2 [Medicago truncatula] gi|355517706|gb|AES99329.1| Fructokinase-2 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/390 (80%), Positives = 339/390 (86%), Gaps = 13/390 (3%)
Query: 1 MALH-STAFCFTGAVSS------YSHSSVKLSTHPTIKASSPLPRLNVR--VKALPGDGL 51
MALH +F FT V++ +S VK S P+ S P RLN + KA+P +G
Sbjct: 1 MALHCGGSFTFTSVVTNPPGSVKFSQPIVKASVFPSTH-SPPNVRLNFKGKTKAIPENG- 58
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
+ ET+ESPLVVCFGEMLIDFVPTVSGLSLA++PAFKKAPGGAPANVAVGI+RLGGSSA
Sbjct: 59 --SPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSA 116
Query: 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 171
FIGKVG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD
Sbjct: 117 FIGKVGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 176
Query: 172 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW 231
MLLQE ELDL LITKAKIFHYGSISLITEPCKSAHIAAAKAAK+AGV LSYDPNLRLPLW
Sbjct: 177 MLLQEDELDLDLITKAKIFHYGSISLITEPCKSAHIAAAKAAKEAGVFLSYDPNLRLPLW 236
Query: 232 PSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPD 291
PSAD AREGILSIWETADIIKISEEEISFLT GEDPYDDAVV KLFH NLKLLLVTEG +
Sbjct: 237 PSADSAREGILSIWETADIIKISEEEISFLTNGEDPYDDAVVRKLFHPNLKLLLVTEGAE 296
Query: 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
GCRYYTK+FSGRV G+KV+AVD TGAGDAFVAGILSQL+TD SLLQKE+QLR++LRFANA
Sbjct: 297 GCRYYTKEFSGRVTGMKVDAVDTTGAGDAFVAGILSQLATDLSLLQKEEQLRESLRFANA 356
Query: 352 CGALTVMERGAIPALPTREAVLNAIHAPVS 381
CGALTV ERGAIPALPT+E VLNA+ PVS
Sbjct: 357 CGALTVTERGAIPALPTKETVLNALLKPVS 386
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077293|ref|XP_002305200.1| predicted protein [Populus trichocarpa] gi|222848164|gb|EEE85711.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/375 (78%), Positives = 320/375 (85%), Gaps = 31/375 (8%)
Query: 2 ALHSTAFCFTGAVSSYSHSSVKLSTHPTIKASSPLPRLNVRVKALPGDGLSETKETRESP 61
ALHSTAFCF G V LS+ + ++T++S
Sbjct: 3 ALHSTAFCFGG---------VALSSRQELC----------------------FRQTKDSS 31
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEF 121
LVVCFGEMLIDFVPT+SGLSL+++PAFKKAPGGAPANVAVGIARLGGSSAFIGKVG DEF
Sbjct: 32 LVVCFGEMLIDFVPTISGLSLSDAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGEDEF 91
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
GYMLA+ILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL+EAELDL
Sbjct: 92 GYMLAEILKENNVNNEGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLKEAELDL 151
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
LI KAKIFHYGSISLITEPCKSAHIAAAK AKDAGV LSYDPNLRLPLWPSA+ AREGI
Sbjct: 152 DLIRKAKIFHYGSISLITEPCKSAHIAAAKVAKDAGVFLSYDPNLRLPLWPSAESAREGI 211
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
LSIW+TADIIKISEEEISFLT+GEDPYDDAVV KLFH NLKLLLVTEGP+GCRYYTK+FS
Sbjct: 212 LSIWDTADIIKISEEEISFLTKGEDPYDDAVVQKLFHPNLKLLLVTEGPEGCRYYTKEFS 271
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
GRV+GLKV+AVD TGAGDAFVAGILSQL+ D SLLQ ED+LR+AL+FANACGALTV ERG
Sbjct: 272 GRVKGLKVDAVDTTGAGDAFVAGILSQLAMDLSLLQNEDRLREALKFANACGALTVKERG 331
Query: 362 AIPALPTREAVLNAI 376
AIPALPTREAV +AI
Sbjct: 332 AIPALPTREAVNSAI 346
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|408362891|gb|AFU56877.1| fructokinase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/389 (78%), Positives = 333/389 (85%), Gaps = 11/389 (2%)
Query: 1 MALHSTAFCFTGAVS------SYSHSSVKLSTHPTIKASSP--LPRLNVRVKALPGDGLS 52
MALHSTAFCF G VS S+S +V+ S + + R NV+ KA GD L
Sbjct: 1 MALHSTAFCFGGVVSLPRNSVSFSQRTVRASAFSSPPPLGSSSIARSNVQGKAFAGDALP 60
Query: 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAF 112
+TKE S LVVCFGEMLIDFVPT +GLSLAE+PAFKKA GGAPANVAVGIARLGGSSAF
Sbjct: 61 DTKE---SSLVVCFGEMLIDFVPTSNGLSLAEAPAFKKAAGGAPANVAVGIARLGGSSAF 117
Query: 113 IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 172
IGKVG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM
Sbjct: 118 IGKVGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 177
Query: 173 LLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWP 232
LLQEAELD LI KAKI HYGSISLITEPCKSAHIAAAKAA+DAGVVLSYDPNLRLPLWP
Sbjct: 178 LLQEAELDFDLIRKAKILHYGSISLITEPCKSAHIAAAKAARDAGVVLSYDPNLRLPLWP 237
Query: 233 SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292
SA AREGILSIW+TAD+IKISEEE+SFLT+GEDPYD+ VV KL+H NLKLLLVTEGPDG
Sbjct: 238 SAKSAREGILSIWDTADVIKISEEEVSFLTEGEDPYDENVVRKLYHPNLKLLLVTEGPDG 297
Query: 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 352
CRYYTK+FSGRV+G+KV+AVD TGAGDAFVAGILSQL+ D SLLQ+ED+LRDAL FANAC
Sbjct: 298 CRYYTKEFSGRVKGMKVDAVDTTGAGDAFVAGILSQLAVDLSLLQEEDKLRDALVFANAC 357
Query: 353 GALTVMERGAIPALPTREAVLNAIHAPVS 381
GALTV ERGAIPALPTRE+VLN + V+
Sbjct: 358 GALTVTERGAIPALPTRESVLNVLLKSVA 386
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388506420|gb|AFK41276.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/390 (80%), Positives = 337/390 (86%), Gaps = 13/390 (3%)
Query: 1 MALH-STAFCFTGAVSS------YSHSSVKLSTHPTIKASSPLPRLNVR--VKALPGDGL 51
MALH +F FT V++ +S VK S P+ S P RLN + KA+P +G
Sbjct: 1 MALHCGGSFTFTSVVTNPPGSVKFSQPIVKASVFPSTH-SPPNVRLNFKGKTKAIPENG- 58
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
+ ET+ESPLVVCFGEMLIDFVPTVSGLSLA++PAFKKAPGGAPANVAVGI+RLGGSSA
Sbjct: 59 --SPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSA 116
Query: 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 171
FIGKVG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD
Sbjct: 117 FIGKVGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 176
Query: 172 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW 231
M LQE ELDL LITKAKIFHYGSISLITEPCKSAHIAAAKAAK+AGV LSYDPNLRLPLW
Sbjct: 177 MPLQEDELDLDLITKAKIFHYGSISLITEPCKSAHIAAAKAAKEAGVFLSYDPNLRLPLW 236
Query: 232 PSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPD 291
PSAD AREGILSIWETADIIKISEEEISFLT GEDPYD AVV KLFH NLKLLLVTEG +
Sbjct: 237 PSADSAREGILSIWETADIIKISEEEISFLTNGEDPYDGAVVRKLFHPNLKLLLVTEGAE 296
Query: 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
GCRYYTK+FSGRV G+KV+AVD TGAGDAFVAGILSQL+TD SLLQKE+QLR++LRFANA
Sbjct: 297 GCRYYTKEFSGRVTGMKVDAVDTTGAGDAFVAGILSQLATDPSLLQKEEQLRESLRFANA 356
Query: 352 CGALTVMERGAIPALPTREAVLNAIHAPVS 381
CGALTV ERGAIPALPT+E VLNA+ PVS
Sbjct: 357 CGALTVTERGAIPALPTKETVLNALLKPVS 386
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|393395652|gb|AFN08699.1| FRK3 [Gossypium herbaceum] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 306/385 (79%), Positives = 335/385 (87%), Gaps = 14/385 (3%)
Query: 2 ALHSTAFCFTGAVSSYS-HSSVKLSTHPTIKAS---------SPLPRLNVRVKALPGDGL 51
AL+ST+ CF G++ SY H SVKL H ++ S P+L+V+ KAL DGL
Sbjct: 3 ALYSTSSCFCGSLGSYPVHKSVKLG-HGKVRDSGFYFPHRFQCATPKLHVQAKALSVDGL 61
Query: 52 SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA 111
E +S LVVCFGEMLIDFVPT+SGLSLAE+PAFKKAPGGAPANVAVGIARLGGSSA
Sbjct: 62 ---PEIMDSSLVVCFGEMLIDFVPTISGLSLAEAPAFKKAPGGAPANVAVGIARLGGSSA 118
Query: 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 171
FIGKVG DEFGYMLADILKENNVN GMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD
Sbjct: 119 FIGKVGEDEFGYMLADILKENNVNNEGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 178
Query: 172 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW 231
MLLQE ELD LITKA IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW
Sbjct: 179 MLLQENELDFDLITKATIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW 238
Query: 232 PSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPD 291
PS + AR+GILSIW+TADIIK+SEEEISFLTQGEDPYDD VV KLFH+NLKLLLVTEGPD
Sbjct: 239 PSVESARKGILSIWDTADIIKVSEEEISFLTQGEDPYDDGVVRKLFHSNLKLLLVTEGPD 298
Query: 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
GCRYYT++FSG+V+GLKVEAVD TGAGDAFVAG LSQL++D SL+Q EDQLR+AL+F+N
Sbjct: 299 GCRYYTQEFSGKVKGLKVEAVDTTGAGDAFVAGTLSQLASDLSLIQDEDQLRNALKFSNV 358
Query: 352 CGALTVMERGAIPALPTREAVLNAI 376
CGALTV ERGAIPALPTREAV+NA+
Sbjct: 359 CGALTVTERGAIPALPTREAVVNAL 383
|
Source: Gossypium herbaceum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22330456|ref|NP_564875.2| fructokinase [Arabidopsis thaliana] gi|12322265|gb|AAG51160.1|AC074025_10 fructokinase, putative [Arabidopsis thaliana] gi|12324405|gb|AAG52172.1|AC020665_17 fructokinase, putative; 80047-82040 [Arabidopsis thaliana] gi|332196387|gb|AEE34508.1| fructokinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/379 (76%), Positives = 320/379 (84%), Gaps = 3/379 (0%)
Query: 1 MALH--STAFCFTGAVSSYSHSSVKLSTHPTIKASSPLP-RLNVRVKALPGDGLSETKET 57
MAL +T FCF+G + S+ +IKA++ P RL+ L G LS T
Sbjct: 1 MALQATTTTFCFSGPTFRSTPHSLTSKRPISIKATTSSPSRLSNSRSNLKGRALSSDGST 60
Query: 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVG 117
+ESP VVCFGEMLIDFVPT SGLSLA++PAFKKAPGGAPANVAVGIARLGGSSAFIGKVG
Sbjct: 61 QESPYVVCFGEMLIDFVPTTSGLSLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVG 120
Query: 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
DEFGYMLA+ILK+NNVN GMRFDPGARTALAFVTL ++GEREFMFYRNPSADMLL+E+
Sbjct: 121 EDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGEREFMFYRNPSADMLLEES 180
Query: 178 ELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
ELD LI KAKIFHYGSISLITEPCKSAHI+AAKAAK+AGV+LSYDPNLRLPLWPSAD A
Sbjct: 181 ELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSADNA 240
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
RE ILSIWETADIIKISEEEI FLT+GEDPYDD VV KLFH LKLLLVTEGP+GCRYYT
Sbjct: 241 REEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFHPKLKLLLVTEGPEGCRYYT 300
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
KDFSGRV GLKV+ VD TGAGDAFVAGILSQL+ D SLLQ E++LR+AL FANACGALTV
Sbjct: 301 KDFSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGALTV 360
Query: 358 MERGAIPALPTREAVLNAI 376
RGAIPALPT+EAV A+
Sbjct: 361 KVRGAIPALPTKEAVHEAL 379
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|418731477|gb|AFX67038.1| fructokinase 3 [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/391 (79%), Positives = 336/391 (85%), Gaps = 12/391 (3%)
Query: 1 MALHSTAFCFTGAVSSYSHSSVKL-STHP-----TIKASSP----LPRLNVRVKALPGDG 50
MALH TAF FTG +S S L S P T+KA+S +PR ++ +ALP D
Sbjct: 1 MALHVTAFSFTGVSTSSKASRSSLLSVFPAPRRCTVKAASQYPPSIPRCKIQGRALPSD- 59
Query: 51 LSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS 110
+ E ES LVVCFGEMLIDFVPT+SGLSLAE+PAFKKAPGGAPANVAVGI+RLGGSS
Sbjct: 60 -NGPLEKDESSLVVCFGEMLIDFVPTISGLSLAEAPAFKKAPGGAPANVAVGISRLGGSS 118
Query: 111 AFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA 170
AFIGKVG DEFGYMLA+ILKENNVN GMRFDPGARTALAFVTLR DGEREFMFYRNPSA
Sbjct: 119 AFIGKVGEDEFGYMLAEILKENNVNSDGMRFDPGARTALAFVTLRKDGEREFMFYRNPSA 178
Query: 171 DMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPL 230
DMLLQE ELDL LI KAK+FHYGSISLITEPCKSAHIAAAKAAKDAGV+LSYDPNLRLPL
Sbjct: 179 DMLLQEDELDLELIRKAKVFHYGSISLITEPCKSAHIAAAKAAKDAGVILSYDPNLRLPL 238
Query: 231 WPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGP 290
WPSA+ AREGILSIW+TADIIKISEEEISFLTQGEDPYDD VV KL+H NLKLLLVTEGP
Sbjct: 239 WPSAESAREGILSIWDTADIIKISEEEISFLTQGEDPYDDNVVRKLYHPNLKLLLVTEGP 298
Query: 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 350
+GCRYYTKDFSGRV+G+KV+AVD TGAGDAFVAGILSQL++D SLLQ E +LRDAL FAN
Sbjct: 299 EGCRYYTKDFSGRVKGIKVDAVDTTGAGDAFVAGILSQLASDVSLLQDESKLRDALSFAN 358
Query: 351 ACGALTVMERGAIPALPTREAVLNAIHAPVS 381
ACGALTVMERGAIPALPTRE VLNA+ V+
Sbjct: 359 ACGALTVMERGAIPALPTREVVLNALLKSVA 389
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225453158|ref|XP_002274388.1| PREDICTED: probable fructokinase-2 [Vitis vinifera] gi|296087158|emb|CBI33532.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/378 (80%), Positives = 331/378 (87%), Gaps = 6/378 (1%)
Query: 3 LHSTAFCFTGAV----SSYSHSSVKLSTHPTIKASSPLPRLNVRVKALPGDGLSETKETR 58
LHS FCFT S SH + + +S LP L+++ KA+PGD + + ET+
Sbjct: 4 LHSNGFCFTAVAFNHPPSVSHGPGTVKASCSPFSSPSLPLLSLQRKAIPGD--NGSPETK 61
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
E+ LVVCFGEMLIDFVPT +GLSLAE+PAFKKAPGGAPANVAVGIARLGGSSAFIGKVG
Sbjct: 62 ENSLVVCFGEMLIDFVPTSNGLSLAEAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGE 121
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFGYMLADILKENNVN GMRFDPGARTALAFVTLR DGEREFMFYRNPSADMLLQE E
Sbjct: 122 DEFGYMLADILKENNVNNEGMRFDPGARTALAFVTLRKDGEREFMFYRNPSADMLLQEDE 181
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
LD LI KAKIFHYGSISLITEPCKSAH+AAAKAAKDAGV++SYDPNLRLPLWPSAD AR
Sbjct: 182 LDFDLIRKAKIFHYGSISLITEPCKSAHLAAAKAAKDAGVIVSYDPNLRLPLWPSADSAR 241
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
EGILSIW TADIIK+SEEEISFLT+GEDPYDDAVV K +H NLKLLLVTEGPDGCRYYTK
Sbjct: 242 EGILSIWNTADIIKMSEEEISFLTKGEDPYDDAVVRKFYHPNLKLLLVTEGPDGCRYYTK 301
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
DFSGRV+GLKV+AVD TGAGDAFVAGILSQL+ D SLLQ+ED+LRDAL+FANACGALTVM
Sbjct: 302 DFSGRVKGLKVDAVDTTGAGDAFVAGILSQLAADLSLLQEEDRLRDALKFANACGALTVM 361
Query: 359 ERGAIPALPTREAVLNAI 376
ERGAIPALP+REAVLNA+
Sbjct: 362 ERGAIPALPSREAVLNAM 379
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| TAIR|locus:2028987 | 384 | AT1G66430 [Arabidopsis thalian | 0.986 | 0.979 | 0.683 | 6.6e-129 | |
| TAIR|locus:2165361 | 343 | AT5G51830 [Arabidopsis thalian | 0.860 | 0.956 | 0.645 | 8.1e-108 | |
| TAIR|locus:2198831 | 329 | AT1G06030 [Arabidopsis thalian | 0.803 | 0.930 | 0.605 | 8.7e-95 | |
| TAIR|locus:2122789 | 324 | AT4G10260 [Arabidopsis thalian | 0.808 | 0.950 | 0.605 | 1.1e-94 | |
| TAIR|locus:2097553 | 326 | AT3G59480 [Arabidopsis thalian | 0.821 | 0.960 | 0.582 | 1e-93 | |
| TAIR|locus:2198821 | 345 | AT1G06020 [Arabidopsis thalian | 0.816 | 0.901 | 0.586 | 3.9e-92 | |
| TAIR|locus:2061320 | 325 | AT2G31390 [Arabidopsis thalian | 0.803 | 0.941 | 0.583 | 9.3e-91 | |
| TAIR|locus:2080270 | 471 | FLN1 "AT3G54090" [Arabidopsis | 0.425 | 0.343 | 0.341 | 3.3e-40 | |
| UNIPROTKB|Q481A7 | 336 | CPS_2648 "Carbohydrate kinase, | 0.797 | 0.904 | 0.335 | 2.3e-39 | |
| TIGR_CMR|CPS_2648 | 336 | CPS_2648 "carbohydrate kinase, | 0.797 | 0.904 | 0.335 | 2.3e-39 |
| TAIR|locus:2028987 AT1G66430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
Identities = 259/379 (68%), Positives = 284/379 (74%)
Query: 1 MALHSTA--FCFTGAVXXXXXXXXXXXTHPTIKASSPLP-RLNVRVKALPGDGLSETKET 57
MAL +T FCF+G +IKA++ P RL+ L G LS T
Sbjct: 1 MALQATTTTFCFSGPTFRSTPHSLTSKRPISIKATTSSPSRLSNSRSNLKGRALSSDGST 60
Query: 58 RESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVG 117
+ESP VVCFGEMLIDFVPT SGLSLA++ RLGGSSAFIGKVG
Sbjct: 61 QESPYVVCFGEMLIDFVPTTSGLSLADAPAFKKAPGGAPANVAVGIARLGGSSAFIGKVG 120
Query: 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
DEFGYMLA+ILK+NNVN GMRFDPGARTALAFVTL ++GEREFMFYRNPSADMLL+E+
Sbjct: 121 EDEFGYMLANILKDNNVNNDGMRFDPGARTALAFVTLTNEGEREFMFYRNPSADMLLEES 180
Query: 178 ELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKA 237
ELD LI KAKIFHYGSISLITEPC GV+LSYDPNLRLPLWPSAD A
Sbjct: 181 ELDFDLIKKAKIFHYGSISLITEPCKSAHISAAKAAKEAGVILSYDPNLRLPLWPSADNA 240
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
RE ILSIWETADIIKISEEEI FLT+GEDPYDD VV KLFH LKLLLVTEGP+GCRYYT
Sbjct: 241 REEILSIWETADIIKISEEEIVFLTKGEDPYDDNVVRKLFHPKLKLLLVTEGPEGCRYYT 300
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
KDFSGRV GLKV+ VD TGAGDAFVAGILSQL+ D SLLQ E++LR+AL FANACGALTV
Sbjct: 301 KDFSGRVHGLKVDVVDTTGAGDAFVAGILSQLANDLSLLQDEERLREALMFANACGALTV 360
Query: 358 MERGAIPALPTREAVLNAI 376
RGAIPALPT+EAV A+
Sbjct: 361 KVRGAIPALPTKEAVHEAL 379
|
|
| TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 213/330 (64%), Positives = 256/330 (77%)
Query: 45 ALPGDGLSETKETRESP-LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXX 103
A+ G+ + T +TR+S LVVCFGEMLIDFVPTV G+SLAE+
Sbjct: 5 AISGNLKNLTIDTRDSETLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGV 64
Query: 104 XRLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM 163
RLGGSSAFIGKVG DEFG MLADIL+ NNV+ +GMRFD ARTALAFVTLR DGEREF+
Sbjct: 65 SRLGGSSAFIGKVGDDEFGRMLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFL 124
Query: 164 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYD 223
F+R+PSADMLL E+ELD +LI KAKIFHYGSISLI EPC G +LSYD
Sbjct: 125 FFRHPSADMLLLESELDKNLIQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYD 184
Query: 224 PNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY-KLFHANLK 282
PNLRLPLWPS + AR+ I+SIW AD+IKISE+EI+FLT G+DPYDD VV KLFH NLK
Sbjct: 185 PNLRLPLWPSEEAARKEIMSIWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLK 244
Query: 283 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 342
LL+V+EGP+GCRYYT++F GRV G+KV+ VD TGAGDAFV+G+L+ L++D +LL+ E +L
Sbjct: 245 LLVVSEGPNGCRYYTQEFKGRVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKL 304
Query: 343 RDALRFANACGALTVMERGAIPALPTREAV 372
R+AL FANACGA+TV ERGAIPA+P+ +AV
Sbjct: 305 REALLFANACGAITVTERGAIPAMPSMDAV 334
|
|
| TAIR|locus:2198831 AT1G06030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 186/307 (60%), Positives = 225/307 (73%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEF 121
LVV FGEMLIDFVPT SG+SL+ES RLGG +AF+GK+G DEF
Sbjct: 11 LVVSFGEMLIDFVPTESGVSLSESSGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDEF 70
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G+MLA IL++N+V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+ EL+L
Sbjct: 71 GHMLAGILRKNDVDDQGINFDKGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNL 130
Query: 182 SLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGI 241
LI AK+FHYGSISLITEPC G +LSYDPNLR PLWPS ++AR+ I
Sbjct: 131 ELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARKQI 190
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+SIW+ ADIIK+S+ E+ FLT G DD L+H NLKLLLVT G +GCRYYTKDF
Sbjct: 191 MSIWDKADIIKVSDVELEFLT-GNKTIDDETAMSLWHPNLKLLLVTLGENGCRYYTKDFH 249
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
G V+ V+AVD TGAGD+FV +L+Q+ D S+L++E++LR LRFANACGA+T ++G
Sbjct: 250 GSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKG 309
Query: 362 AIPALPT 368
AIPALPT
Sbjct: 310 AIPALPT 316
|
|
| TAIR|locus:2122789 AT4G10260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 187/309 (60%), Positives = 221/309 (71%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGAD 119
+PL+V FGEMLIDFVP SG+SLAES +LGG SAFIGK G D
Sbjct: 4 TPLIVSFGEMLIDFVPDTSGVSLAESTGFLKAPGGAPANVACAITKLGGKSAFIGKFGDD 63
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
EFG+ML +ILK+N VN G+ FD ARTALAFVTL+ DGEREFMFYRNPSADMLL+E+EL
Sbjct: 64 EFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESEL 123
Query: 180 DLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKARE 239
+ LI KAKIFHYGSISLI+EPC GV+LSYDPN+RLPLWPS + A E
Sbjct: 124 NKDLIKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIE 183
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
GI SIW ADIIK+S++E++FLT+G+ DD VV L H LKLL+VT+G GCRYYTK
Sbjct: 184 GIKSIWNEADIIKVSDDEVTFLTRGDAEKDD-VVLSLMHDKLKLLIVTDGEKGCRYYTKK 242
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
F GRV G V+AVD TGAGD+FV L L D S+L E +L++AL FANACGA+ +
Sbjct: 243 FKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQ 302
Query: 360 RGAIPALPT 368
+GAIPALPT
Sbjct: 303 KGAIPALPT 311
|
|
| TAIR|locus:2097553 AT3G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
Identities = 183/314 (58%), Positives = 224/314 (71%)
Query: 59 ESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGA 118
E L+V FGEMLIDFVPTVSG+SLA++ RLGG +AF+GK+G
Sbjct: 7 EKSLIVSFGEMLIDFVPTVSGVSLADAPGFIKAPGGAPANVAIAISRLGGRAAFVGKLGD 66
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DEFG+MLA ILK+N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+ E
Sbjct: 67 DEFGHMLAGILKQNGVSAEGINFDTGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDE 126
Query: 179 LDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAR 238
L+L +I AK+FHYGSISLI EPC G +LSYDPNLRLPLWPS ++A+
Sbjct: 127 LNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLRLPLWPSKEEAQ 186
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
+ ILSIW+ A++IK+S+EE+ FLT G D DD L+H+NLKLLLVT G GCRYYTK
Sbjct: 187 KQILSIWDKAEVIKVSDEELMFLT-GSDKVDDETALSLWHSNLKLLLVTLGEKGCRYYTK 245
Query: 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
F G V V+AVD TGAGD+FV +L ++ D ++L+ E +LR+ LR ANACGA+T
Sbjct: 246 SFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTT 305
Query: 359 ERGAIPALPTREAV 372
++GAIPALPT V
Sbjct: 306 KKGAIPALPTESEV 319
|
|
| TAIR|locus:2198821 AT1G06020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 183/312 (58%), Positives = 221/312 (70%)
Query: 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKV 116
T E L+V FGEMLIDFVPTVSG+SL+ES RLGG +AF+GK+
Sbjct: 5 TGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKL 64
Query: 117 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE 176
G D+FG+MLA IL++N V+ G+ FD GARTALAFVTLRSDGEREFMFYRNPSADMLL+
Sbjct: 65 GDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRP 124
Query: 177 AELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADK 236
EL+L LI AK+FHYGSISLITEPC G +LSYDPNLR PLWPS ++
Sbjct: 125 DELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEE 184
Query: 237 AREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296
AR I+SIW+ ADIIK+S+ E+ FLT+ + DD L+H NLKLLLVT G GC Y+
Sbjct: 185 ARTQIMSIWDKADIIKVSDVELEFLTENKT-MDDKTAMSLWHPNLKLLLVTLGEKGCTYF 243
Query: 297 TKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356
TK F G V+ V+AVD TGAGD+FV +L Q+ D S+L+ E +LR LRFANACGA+T
Sbjct: 244 TKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAIT 303
Query: 357 VMERGAIPALPT 368
++GAIPALPT
Sbjct: 304 TTKKGAIPALPT 315
|
|
| TAIR|locus:2061320 AT2G31390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 179/307 (58%), Positives = 218/307 (71%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXXXXXXXXXXRLGGSSAFIGKVGADEF 121
L+V FGEMLIDFVPT SG+SLAE+ RLGG SAF+GK+G DEF
Sbjct: 9 LIVSFGEMLIDFVPTESGVSLAEAPGFLKAPGGAPANVAIAVSRLGGRSAFVGKLGDDEF 68
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G+MLA IL++N V+ G+ FD GARTALAFVTLR+DG+REFMFYRNPSADMLL+ EL+L
Sbjct: 69 GHMLAGILRKNGVDDQGINFDTGARTALAFVTLRADGDREFMFYRNPSADMLLRPDELNL 128
Query: 182 SLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGI 241
LI AK+FHYGSISLI EPC G +LSYDPNLR PLWPS ++A+ I
Sbjct: 129 DLIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGALLSYDPNLREPLWPSKEEAKTQI 188
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+SIW+ A+IIK+S+ E+ FLT G + DD L+H NLKLLLVT G GCRYYTK F
Sbjct: 189 MSIWDKAEIIKVSDVELEFLT-GSNKIDDETALTLWHPNLKLLLVTLGEKGCRYYTKTFK 247
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
G V V AVD TGAGD+FV +L+Q+ D S+L+ E++LR LRFANACGA+T ++G
Sbjct: 248 GAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKG 307
Query: 362 AIPALPT 368
AIPALP+
Sbjct: 308 AIPALPS 314
|
|
| TAIR|locus:2080270 FLN1 "AT3G54090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 248 (92.4 bits), Expect = 3.3e-40, Sum P(3) = 3.3e-40
Identities = 57/167 (34%), Positives = 94/167 (56%)
Query: 105 RLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR-SDGEREFM 163
RLGG +AF+GKVG D+FG L ++ + V ++FD ++TA V ++ DG+
Sbjct: 160 RLGGRAAFMGKVGEDDFGDELVLMMNQERVQTRAVKFDENSKTACTRVKIKFKDGKMMAE 219
Query: 164 FYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCXXXXXXXXXX-XXXXGVVLSY 222
+ P D L +EL+L+++ +A+IFH+ S ++T P G ++ +
Sbjct: 220 TVKEPPEDSLFA-SELNLAVLKEARIFHFNS-EVLTSPTMQSTLFTAIQWSKKFGGLIFF 277
Query: 223 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD 269
D NL LPLW S ++ R+ I W A+II++S++E+ FL ED Y+
Sbjct: 278 DLNLPLPLWRSRNETRKLIKKAWNEANIIEVSQQELEFLLD-EDYYE 323
|
|
| UNIPROTKB|Q481A7 CPS_2648 "Carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 105/313 (33%), Positives = 158/313 (50%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXX-XXXXXXXXRLGGSSAFIGKVGADEF 121
V+CFGE LIDF+ T S + RLGG + F G+VG D F
Sbjct: 4 VICFGEALIDFLNTGSQEDGCLTLNNYRQYPGGAPANAAVAVSRLGGKAFFAGQVGDDAF 63
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G L + L V+ + P A+TALAFV L GER F F+R+ +AD+L +++++D
Sbjct: 64 GDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLFEKSQVDE 123
Query: 182 SLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGI 241
++ IFH+ S +L + G ++S+D NLR LW + + +
Sbjct: 124 IWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATGKVSISVV 183
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ + A ++K S EE+++L QG ++ + F AN +LL++T+G + YYT
Sbjct: 184 NKLVKQAHVLKFSSEELTYLAQGNI---ESYIQSCFDANCQLLIITDGENVLTYYTAAIL 240
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS----LLQKEDQLRDALRFANACGALTV 357
+ KV VD T GDAF+ +L LS F LL + L+ + F+ +CGALTV
Sbjct: 241 DAISPPKVITVDTTAGGDAFIGALLFALS-HFEQLTELLDDNELLKQIINFSASCGALTV 299
Query: 358 MERGAIPALPTRE 370
+ GA PALP E
Sbjct: 300 TKAGAFPALPNFE 312
|
|
| TIGR_CMR|CPS_2648 CPS_2648 "carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 105/313 (33%), Positives = 158/313 (50%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESXXXXXXXXXXX-XXXXXXXXRLGGSSAFIGKVGADEF 121
V+CFGE LIDF+ T S + RLGG + F G+VG D F
Sbjct: 4 VICFGEALIDFLNTGSQEDGCLTLNNYRQYPGGAPANAAVAVSRLGGKAFFAGQVGDDAF 63
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G L + L V+ + P A+TALAFV L GER F F+R+ +AD+L +++++D
Sbjct: 64 GDFLINALHTYQVDTQFVSKHPHAKTALAFVLLDEMGERSFSFHRHQTADLLFEKSQVDE 123
Query: 182 SLITKAKIFHYGSISLITEPCXXXXXXXXXXXXXXGVVLSYDPNLRLPLWPSADKAREGI 241
++ IFH+ S +L + G ++S+D NLR LW + + +
Sbjct: 124 IWFCESPIFHFCSNTLTEKDIADCTEYAVERALVHGAIISFDVNLRHNLWATGKVSISVV 183
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ + A ++K S EE+++L QG ++ + F AN +LL++T+G + YYT
Sbjct: 184 NKLVKQAHVLKFSSEELTYLAQGNI---ESYIQSCFDANCQLLIITDGENVLTYYTAAIL 240
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS----LLQKEDQLRDALRFANACGALTV 357
+ KV VD T GDAF+ +L LS F LL + L+ + F+ +CGALTV
Sbjct: 241 DAISPPKVITVDTTAGGDAFIGALLFALS-HFEQLTELLDDNELLKQIINFSASCGALTV 299
Query: 358 MERGAIPALPTRE 370
+ GA PALP E
Sbjct: 300 TKAGAFPALPNFE 312
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6XZ78 | SCRK2_MAIZE | 2, ., 7, ., 1, ., 4 | 0.6775 | 0.8031 | 0.9134 | N/A | no |
| Q6XZ79 | SCRK1_MAIZE | 2, ., 7, ., 1, ., 4 | 0.6297 | 0.8267 | 0.9752 | N/A | no |
| P37829 | SCRK_SOLTU | 2, ., 7, ., 1, ., 4 | 0.6151 | 0.8031 | 0.9592 | N/A | no |
| A2WXV8 | SCRK1_ORYSI | 2, ., 7, ., 1, ., 4 | 0.6332 | 0.8346 | 0.9845 | N/A | no |
| A2YQL4 | SCRK2_ORYSI | 2, ., 7, ., 1, ., 4 | 0.6709 | 0.8110 | 0.9196 | N/A | no |
| Q42896 | SCRK2_SOLLC | 2, ., 7, ., 1, ., 4 | 0.6380 | 0.8241 | 0.9573 | N/A | no |
| Q7XJ81 | SCRK2_SOLHA | 2, ., 7, ., 1, ., 4 | 0.6380 | 0.8241 | 0.9573 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 0.0 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 1e-128 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 1e-86 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 4e-85 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 5e-75 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 6e-75 | |
| PLN02543 | 496 | PLN02543, PLN02543, pfkB-type carbohydrate kinase | 2e-61 | |
| PLN02967 | 581 | PLN02967, PLN02967, kinase | 6e-50 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 1e-47 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 3e-45 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 1e-37 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 9e-34 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 1e-24 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 2e-24 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 1e-22 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 4e-22 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 6e-19 | |
| cd01172 | 304 | cd01172, RfaE_like, RfaE encodes a bifunctional AD | 2e-17 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 9e-16 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 1e-15 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 2e-14 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 8e-14 | |
| PLN02341 | 470 | PLN02341, PLN02341, pfkB-type carbohydrate kinase | 1e-13 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 2e-13 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 4e-13 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 5e-13 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 9e-12 | |
| TIGR02198 | 315 | TIGR02198, rfaE_dom_I, rfaE bifunctional protein, | 7e-09 | |
| PRK09850 | 313 | PRK09850, PRK09850, pseudouridine kinase; Provisio | 6e-08 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 7e-08 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 3e-07 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 8e-07 | |
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 8e-07 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 8e-07 | |
| PRK11316 | 473 | PRK11316, PRK11316, bifunctional heptose 7-phospha | 1e-06 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 5e-05 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 2e-04 | |
| PRK13508 | 309 | PRK13508, PRK13508, tagatose-6-phosphate kinase; P | 6e-04 | |
| COG2870 | 467 | COG2870, RfaE, ADP-heptose synthase, bifunctional | 0.003 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 647 bits (1670), Expect = 0.0
Identities = 257/324 (79%), Positives = 289/324 (89%), Gaps = 1/324 (0%)
Query: 54 TKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFI 113
T ES LVVCFGEMLIDFVPTVSG+SLAE+PAFKKAPGGAPANVAVGI+RLGGSSAFI
Sbjct: 4 APSTAESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFI 63
Query: 114 GKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 173
GKVG DEFG+MLADILK+N VN G+RFDPGARTALAFVTLRSDGEREFMFYRNPSADML
Sbjct: 64 GKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 123
Query: 174 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS 233
L+E+ELDL LI KAKIFHYGSISLITEPC+SAH+AA K AK+AG +LSYDPNLRLPLWPS
Sbjct: 124 LRESELDLDLIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPS 183
Query: 234 ADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293
A+ AREGI+SIW+ ADIIK+S+EE+ FLT G+DP DD VV KL+H NLKLLLVTEG +GC
Sbjct: 184 AEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV-KLWHPNLKLLLVTEGEEGC 242
Query: 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353
RYYTKDF GRV+G KV+AVD TGAGDAFV G+LSQL+ D SLL+ E++LR+ALRFANACG
Sbjct: 243 RYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACG 302
Query: 354 ALTVMERGAIPALPTREAVLNAIH 377
A+T ERGAIPALPT+EAVL +
Sbjct: 303 AITTTERGAIPALPTKEAVLKLLK 326
|
Length = 330 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-128
Identities = 168/302 (55%), Positives = 209/302 (69%), Gaps = 7/302 (2%)
Query: 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEF 121
VVCFGE LIDF+P SG F KAPGGAPANVAV +ARLGG +AFIGKVG DEF
Sbjct: 1 KVVCFGEALIDFIPEGSGAP----ETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEF 56
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G L + LKE V+ G++FDP A T LAFVTL +DGER F FYR P+AD+LL + EL+
Sbjct: 57 GDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLL-DTELNP 115
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
L+++A I H+GSI+L +EP +SA + +AAK AGV++S+DPNLR PLW ++ARE I
Sbjct: 116 DLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERI 175
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ E ADI+K+S+EE+ L EDP + + L LKL+LVT G DG YTK
Sbjct: 176 AELLELADIVKLSDEELELLFGEEDP--EEIAALLLLFGLKLVLVTRGADGALLYTKGGV 233
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
G V G+ VE VD TGAGDAFVAG+L+QL + L ED+L +ALRFANA GALT + G
Sbjct: 234 GEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAG 293
Query: 362 AI 363
AI
Sbjct: 294 AI 295
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 1e-86
Identities = 118/302 (39%), Positives = 160/302 (52%), Gaps = 10/302 (3%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV GE+++D P G L ++ +F+K GGA ANVAVG+ARLG A + VG D FG
Sbjct: 2 VVTIGEVMVDLSPPGGG-RLEQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFG 60
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
+ L+ V+ + +R DPG T L F+ + + GER ++YR SA L +LD +
Sbjct: 61 RFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEA 120
Query: 183 LITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+ A H I+L ++E + A + A +AAK GV +S+D N R LW SA++ARE +
Sbjct: 121 ALAGADHLHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLW-SAEEAREAL 179
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ DI+ SEEE L EDP D A +K ++V G +G YT
Sbjct: 180 EELLPYVDIVLPSEEEAEALLGDEDPTDAAERALALALGVKAVVVKLGAEGALVYTGGGR 239
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
V VE VD TGAGDAF AG L+ L + L +ALRFANA AL V G
Sbjct: 240 VFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRPG 292
Query: 362 AI 363
I
Sbjct: 293 DI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (666), Expect = 4e-85
Identities = 121/280 (43%), Positives = 157/280 (56%), Gaps = 4/280 (1%)
Query: 90 KAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTAL 149
K PGGAPANVAVGIARLGG S FIG+VG D FG + L++ V+ +R DP RT+
Sbjct: 25 KCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTST 84
Query: 150 AFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAA 209
V L GER F F PSAD+ LQ DL + + H SI+L EP +S A
Sbjct: 85 VVVDLDDQGERSFTFMVRPSADLFLQPQ--DLPPFRQGEWLHLCSIALSAEPSRSTTFEA 142
Query: 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD 269
+ K AG +S+DPNLR LW + RE + AD++K+SEEE+ FL+ G +
Sbjct: 143 MRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLS-GTSQLE 201
Query: 270 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL 329
DA+ + LLLVT G +G +T+ V+ VD TGAGDAFVAG+L+ L
Sbjct: 202 DAIYALADRYPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGL 261
Query: 330 STDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369
S L E +L + + A ACGAL +GA+ ALP R
Sbjct: 262 S-QAGLWTDEAELAEIIAQAQACGALATTAKGAMTALPNR 300
|
Length = 304 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 5e-75
Identities = 125/319 (39%), Positives = 161/319 (50%), Gaps = 24/319 (7%)
Query: 63 VVCFGEMLIDFVPTVSG-----LSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVG 117
VV GE +D + V FK A GG ANVAV +ARLG A IG VG
Sbjct: 2 VVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGAVG 61
Query: 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
D+FG L + L++ V+ + + D GA T LA + + DGER F+FYR A +LL
Sbjct: 62 DDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPE 120
Query: 178 ELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
+LD + A + H I L P A +AA + AK AGV +S+D N R LW
Sbjct: 121 DLDEDELAGADVLHISGIQLEIPP--EALLAALELAKAAGVTVSFDLNPRPALWD----- 173
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
RE + + ADI+ +EEE LT G + +A L +K ++VT G +G +T
Sbjct: 174 RELLEELLALADILFPNEEEAELLT-GLEEDAEAAAALLLAKGVKTVVVTLGAEGAVVFT 232
Query: 298 KDFSGRV---QGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
V KV+ VD TGAGDAF AG L+ L S L +ALRFANA A
Sbjct: 233 GGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAA 285
Query: 355 LTVMERGAIPALPTREAVL 373
L V GA P+LPTRE V
Sbjct: 286 LAVTRPGARPSLPTREEVE 304
|
Length = 311 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 6e-75
Identities = 124/315 (39%), Positives = 159/315 (50%), Gaps = 24/315 (7%)
Query: 61 PLVVCFGEMLIDFVPTVSGL--SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
+V GE ID + V GL L +K GGA ANVAV +ARLGG FIGKVG
Sbjct: 2 TKIVVIGEANIDLIGRVEGLEGELNRVKTVEKGAGGAGANVAVALARLGGEVTFIGKVGD 61
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D FG L ++LK+ V+ + D RT LA + + DGER FYR +AD+ + E
Sbjct: 62 DNFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGERTINFYRGAAADLTPE--E 119
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L L+ A I + L ++ +AAK+ G +DPNLR PLW +
Sbjct: 120 LPEDLLENADILYLSGS-LPLPLPEATLEELIEAAKNGGT---FDPNLRDPLWADLEVLL 175
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA---NLKLLLVTEGPDGCRY 295
E + ADI+K +EEE+ LT GE D H +K ++VT G DG
Sbjct: 176 E----LLPLADILKPNEEELEALT-GEKINDIEEALAALHKHAKGVKTVVVTLGADGALL 230
Query: 296 YTKDFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
D V + KV+ VD TGAGDAFVAG L+ L S L +ALRFANA A
Sbjct: 231 VDGDGEVHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKS-------LEEALRFANAVAA 283
Query: 355 LTVMERGAIPALPTR 369
L V + GAI +LPT
Sbjct: 284 LVVQKTGAISSLPTL 298
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|215299 PLN02543, PLN02543, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 205 bits (522), Expect = 2e-61
Identities = 128/364 (35%), Positives = 182/364 (50%), Gaps = 54/364 (14%)
Query: 61 PLVVCFGEMLIDFVPTV-------------SGLSLA-ESPAFKKAPGGAPANVAVGIARL 106
PLV CFG + +FVPTV L + P F +APGG P+NVA+ RL
Sbjct: 126 PLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRL 185
Query: 107 GGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAF--VTLRSDGEREFMF 164
GG +AF+GKVG D+FG L ++ + V ++FD A+TA + + R G+
Sbjct: 186 GGRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAET 245
Query: 165 YRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDP 224
+ + D LL +EL+L+++ +A++FH+ S L + +S A + +K G ++ +D
Sbjct: 246 VKEAAEDSLLA-SELNLAVLKEARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDL 304
Query: 225 NLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK--------- 275
NL LPLW S D+ RE I W ADII++S +E+ FL ED Y+ Y
Sbjct: 305 NLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLD-EDYYERKRNYPPQYYAESFE 363
Query: 276 ------------------LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAV----- 312
L+H LKLLLVT+G YYT F G V G E V
Sbjct: 364 QTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVG--TEDVLITPF 421
Query: 313 --DATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370
D TG+GDA VA I+ +L+T + + +D L LRFA A G ++ GA+ PT
Sbjct: 422 TCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTES 481
Query: 371 AVLN 374
A N
Sbjct: 482 ATQN 485
|
Length = 496 |
| >gnl|CDD|215521 PLN02967, PLN02967, kinase | Back alignment and domain information |
|---|
Score = 176 bits (447), Expect = 6e-50
Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 35/344 (10%)
Query: 61 PLVVCFGEMLIDFVPT--------------VSGLSLAESPAFKKAPGGAPANVAVGIARL 106
PLV CFG FVP+ + F +APGG+ VA+ +A L
Sbjct: 197 PLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASL 256
Query: 107 GGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR 166
GG AF+GK+G D++G + L N V + D TA++ + + G + +
Sbjct: 257 GGKVAFMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVK 316
Query: 167 NPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNL 226
P A+ L ++E+++ ++ +AK+F++ + SL+ +S + A K +K G V+ YD NL
Sbjct: 317 -PCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNL 375
Query: 227 RLPLWPSADKAREGILSIWETADIIKISEEEISFL----------TQGEDP-----YDDA 271
LPLW S+++ + I W ADII+++++E+ FL T+ D Y
Sbjct: 376 PLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYSPE 435
Query: 272 VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAV-----DATGAGDAFVAGIL 326
VV L+H NLK+L VT G YYTK+ +G V G++ + D + +GD VAG++
Sbjct: 436 VVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLM 495
Query: 327 SQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370
L+ L+ + L +++A CG + P +E
Sbjct: 496 RMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKE 539
|
Length = 581 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 1e-47
Identities = 96/290 (33%), Positives = 137/290 (47%), Gaps = 29/290 (10%)
Query: 84 ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDP 143
+F+ PGG AN AV ARLG A IG VG D FG L + L+E ++ + +
Sbjct: 27 LGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVSYVEVVV 86
Query: 144 GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEP 201
GA T A +T+ GE + P A+ L A++D L LI A + + L E
Sbjct: 87 GAPTGTAVITVDESGENRIVVV--PGANGELTPADVDAALELIAAADV-----LLLQLEI 139
Query: 202 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261
+AA +AA+ AGV + +P P AR + DI+ +E E + L
Sbjct: 140 PLETVLAALRAARRAGVTVILNP---AP-------ARPLPAELLALVDILVPNETEAALL 189
Query: 262 T--QGEDPYDDAVVYKLFHA-NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAG 318
T + D D +L A +K ++VT G G + V KV+AVD TGAG
Sbjct: 190 TGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAG 249
Query: 319 DAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368
D F+ + + L+ S L +A+RFANA AL+V GA P++PT
Sbjct: 250 DTFIGALAAALARGLS-------LEEAIRFANAAAALSVTRPGAQPSIPT 292
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 156 bits (398), Expect = 3e-45
Identities = 91/294 (30%), Positives = 129/294 (43%), Gaps = 28/294 (9%)
Query: 84 ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDP 143
+F+ PGG AN AV ARLG + IGKVG D FG L + LK N ++ +
Sbjct: 22 HGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTVK 81
Query: 144 GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEP 201
T AF+T+ GE + A+ L ++D +LI ++ I + L E
Sbjct: 82 DTPTGTAFITVDDTGENRIVVV--AGANAELTPEDIDAAEALIAESDI-----VLLQLEI 134
Query: 202 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261
+ AAK AK GV + +P P D + DII +E E L
Sbjct: 135 PLETVLEAAKIAKKHGVKVILNP---APAIKDLDD------ELLSLVDIITPNETEAEIL 185
Query: 262 T--QGEDPYDDAVVYKLFHA-NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAG 318
T + D D + +K +++T G G +KD S + KV+AVD T AG
Sbjct: 186 TGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAG 245
Query: 319 DAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372
D F L+ S L DA+RFANA A++V +GA ++P E V
Sbjct: 246 DTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVTRKGAQSSIPYLEEV 292
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 1e-37
Identities = 78/308 (25%), Positives = 126/308 (40%), Gaps = 37/308 (12%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAF------KKAPGGAPANVAVGIARLGGSSAFIGKV 116
V G + D + + S ++ GG+ N AV +A+LG S + V
Sbjct: 2 VAVVGHLNYDII--LKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAV 59
Query: 117 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE 176
G D G + + L+E V+ + +R T +AF+ +DG+ + Y P A L+
Sbjct: 60 GEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFIL--TDGDDNQIAYFYPGAMDELEP 117
Query: 177 AELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADK 236
+ + L + P I A+ G+ +S+DP LP
Sbjct: 118 NDEADP------DGLADIVHLSSGP---GLIELARELAAGGITVSFDPGQELPRLSG--- 165
Query: 237 AREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296
E + I E ADI+ +++ E L + +A + +++++VT GP G +
Sbjct: 166 --EELEEILERADILFVNDYEAELL-KERTGLSEAELASG----VRVVVVTLGPKGAIVF 218
Query: 297 TKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 355
V + V+ VD TGAGDAF AG L L + L ++LR N +L
Sbjct: 219 EDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYDLE-------ESLRLGNLAASL 271
Query: 356 TVMERGAI 363
V RGA
Sbjct: 272 KVERRGAQ 279
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 9e-34
Identities = 90/330 (27%), Positives = 133/330 (40%), Gaps = 50/330 (15%)
Query: 63 VVCFGEMLIDFVPTVS------------GLSLAESPAF---------KKAPGGAPANVAV 101
V+ G L+D + V + LA+ K GG+ AN
Sbjct: 4 VLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIR 63
Query: 102 GIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGERE 161
G A LGGS+AFIG+VG D+ G L L+ V+ P T V + D ER
Sbjct: 64 GAAALGGSAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQV-QPDGPTGTCAVLVTPDAERT 122
Query: 162 FMFYRNPSADMLLQEAELDLSLITKAKIF---HYGSISLITEPCKSAHIAAAKAAKDAGV 218
A L +LD SL+ KAK Y L+T P ++ + AA+ AK+ GV
Sbjct: 123 --MCTYLGAANELSPDDLDWSLLAKAKYLYLEGY----LLTVPPEAI-LLAAEHAKENGV 175
Query: 219 VLS---YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 275
++ P + + +E +L + DI+ +EEE L + E D K
Sbjct: 176 KIALNLSAPFI-------VQRFKEALLELLPYVDILFGNEEEAEALAEAETTDDLEAALK 228
Query: 276 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFS 334
L +++++T+G G V + VE VD GAGDAF G L
Sbjct: 229 LLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYG------ 282
Query: 335 LLQKEDQLRDALRFANACGALTVMERGAIP 364
L+Q E L + +R + A + + G
Sbjct: 283 LVQGEP-LEECIRLGSYAAAEVIQQLGPRL 311
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-24
Identities = 79/281 (28%), Positives = 111/281 (39%), Gaps = 42/281 (14%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 148
K PGG NVAV RLG SA+IG VG D+ G + LK V+ + R G A
Sbjct: 18 KMYPGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGE-NA 76
Query: 149 LAFVTLRSDGEREFMFYR-NPSADMLLQEAELDLSLITKAKIFH---YGSISLITEPCKS 204
+A V L DG+R F A EA DL +++ + H Y + + ++
Sbjct: 77 VADVELV-DGDRIFGLSNKGGVAREHPFEA--DLEYLSQFDLVHTGIYSHEGHLEKALQA 133
Query: 205 AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 264
A A +S+D + R + + +F +
Sbjct: 134 LVGAGAL--------ISFDFSDRWDD-DYLQLVCPYV---------------DFAFFSAS 169
Query: 265 EDPYDDAVVYKL--FHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAF 321
+ D+ V KL + KL++VT G DG Y V VE VD GAGD+F
Sbjct: 170 DLS-DEEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSF 228
Query: 322 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362
+AG L SLL + +A+R A T GA
Sbjct: 229 IAGFL------LSLLAGGTAIAEAMRQGAQFAAKTCGHEGA 263
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-24
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 91 APGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALA 150
A GG AN AV ARLG AFI VG D G + L ++ ++ A + G T +A
Sbjct: 37 AFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVA 96
Query: 151 FVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAA 210
+ + +GE + +A + E LI A + L T P ++ +AAA
Sbjct: 97 LIFVNDEGENSIGIHAGANAALTPALVEAHRELIANA---DALLMQLET-PLETV-LAAA 151
Query: 211 KAAKDAG--VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT--QGED 266
K AK G V+L+ P LP + +L++ DII +E E LT + ED
Sbjct: 152 KIAKQHGTKVILNPAPARELP---------DELLAL---VDIITPNETEAEKLTGIRVED 199
Query: 267 PYDDAVVYKLFHA-NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGD----AF 321
D A ++ H ++ +L+T G G RV G +V+AVD AGD A
Sbjct: 200 DDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGAL 259
Query: 322 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLN 374
V +L L +A+RFA+A A+ V +GA P++P RE +
Sbjct: 260 VTALLEGKP-----------LPEAIRFAHAAAAIAVTRKGAQPSIPWREEIDA 301
|
Length = 306 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 1e-22
Identities = 79/314 (25%), Positives = 118/314 (37%), Gaps = 39/314 (12%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPA----FKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
V+ G ++D + V+ + + GG AN AV +ARLGG + IG VG
Sbjct: 2 VLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGD 61
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D G ++ L V+ + + PGAR+ ++ +T + + +
Sbjct: 62 DAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPD 121
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV--VLSYDPNLRLPLWPSADK 236
L L+ A + A+ A+ G+ L D +
Sbjct: 122 AILGGA---------DAVLVDGRQPEAALHLAQEARARGIPIPLDLD--------GGGLR 164
Query: 237 AREGILSIWETADIIKISEEEISFLTQ-GEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295
E +L + AD SE FL D+A+ L + + VT G GC +
Sbjct: 165 VLEELLPL---ADHAICSEN---FLRPNTGSADDEALEL-LASLGIPFVAVTLGEAGCLW 217
Query: 296 YTKDFS-GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
+D V VE VD TGAGD F +L + LR+ALRFA+A A
Sbjct: 218 LERDGELFHVPAFPVEVVDTTGAGDVFHGAFA------HALAEGMP-LREALRFASAAAA 270
Query: 355 LTVMERGAIPALPT 368
L G LPT
Sbjct: 271 LKCRGLGGRAGLPT 284
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 4e-22
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 27/307 (8%)
Query: 71 IDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130
+D +P V S F K GG AN AV ++LG A +G VG D FG K
Sbjct: 32 VDRMPQVGETLHGTS--FHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFK 89
Query: 131 ENNVNGAGMRFDPGARTALAFVTL-RSDGEREFMFYRNPSADMLLQEAELDLSLITKAKI 189
N VN + + + T LA + + G E + P A+ L +D I
Sbjct: 90 RNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGANNALTPQMVDAQ---TDNI 144
Query: 190 FHYGSISLI-TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA 248
+ + E + A K AK+ G ++P P P + I +
Sbjct: 145 QNICKYLICQNEIPLETTLDALKEAKERGCYTVFNPA---PA-PKLAEVEI-IKPFLKYV 199
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKL----LLVTEGPDGCRYYTKDFSGR- 303
+ ++E E + +T G + D +K +L +++T G +GC K+
Sbjct: 200 SLFCVNEVEAALIT-GMEVTDTESAFKASKELQQLGVENVIITLGANGCLIVEKENEPVH 258
Query: 304 VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363
V G +V+AVD TGAGD FV + +S L ++ + AN A++V G
Sbjct: 259 VPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLK-------ESCKRANRIAAISVTRHGTQ 311
Query: 364 PALPTRE 370
+ P
Sbjct: 312 SSYPHPS 318
|
Length = 326 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 6e-19
Identities = 69/278 (24%), Positives = 100/278 (35%), Gaps = 45/278 (16%)
Query: 88 FKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGART 147
+++PGG ANVAV +A+LG F +G DE G + L+ D R
Sbjct: 31 SRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGGDKHTVAWRDKPTRK 90
Query: 148 ALAFVTLRSDGEREFMFYRNPSADMLLQE--AELDLSLITKAKIFHYGSISLITEPCKSA 205
L+F+ +GER D L E D IT +
Sbjct: 91 TLSFID--PNGERTITVPGERLEDDLKWPILDEGDGVFIT-------AAAVDKE------ 135
Query: 206 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 265
A K + V+L P +R+ + + DI+ S + L E
Sbjct: 136 --AIRKCRETKLVILQVTPRVRV----------DELNQALIPLDILIGSRLDPGELVVAE 183
Query: 266 DPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGI 325
K+ + L+VTEG G Y V K + D+TGAGD+F AG
Sbjct: 184 ---------KIAGPFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGF 234
Query: 326 LSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363
+ L +S + +AL CGA+ V G
Sbjct: 235 IYGLLKGWS-------IEEALELGAQCGAICVSHFGPY 265
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 2e-17
Identities = 90/330 (27%), Positives = 134/330 (40%), Gaps = 61/330 (18%)
Query: 63 VVCFGEMLID-FV-PTVSGLSL-AESPAFK-----KAPGGAPANVAVGIARLGGSSAFIG 114
V+ G++++D ++ V +S A P K GGA ANVA +A LG +G
Sbjct: 2 VLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGGA-ANVANNLASLGAKVTLLG 60
Query: 115 KVGADEFGYMLADILKENNVNGAGMRFDPGART-------ALAFVTLRSDGEREFMFYRN 167
VG DE G +L +L++ ++ G+ D G T A LR D E +
Sbjct: 61 VVGDDEAGDLLRKLLEKEGIDTDGIV-DEGRPTTTKTRVIARNQQLLRVDREDD----SP 115
Query: 168 PSADMLLQEAELDLSLITKAKI-----FHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 222
SA+ + E + +A + + G ++T A IAAA+ G+ +
Sbjct: 116 LSAEEEQRLIERIAERLPEADVVILSDYGKG---VLTPRVIEALIAAAREL---GIPVLV 169
Query: 223 DPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFH- 278
DP R S + A ++ +E+E E DD A KL
Sbjct: 170 DPKGR-------------DYSKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLEL 216
Query: 279 ANLKLLLVTEGPDGCRYYTKDFSGRVQ---GLKVEAVDATGAGDAFVAGILSQLSTDFSL 335
NL+ LLVT G +G + +D G VQ L E D TGAGD +A + L+ L
Sbjct: 217 LNLEALLVTLGEEGMTLFERD--GEVQHIPALAKEVYDVTGAGDTVIATLALALAAGADL 274
Query: 336 LQKEDQLRDALRFANACGALTVMERGAIPA 365
+A ANA + V + G P
Sbjct: 275 E-------EAAFLANAAAGVVVGKVGTAPV 297
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. Length = 304 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 9e-16
Identities = 71/288 (24%), Positives = 100/288 (34%), Gaps = 61/288 (21%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 148
K GG NVAV R G I VG D++G L L V+ + + G TA
Sbjct: 19 KAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHG-VTA 77
Query: 149 LAFVTLRSDGEREFMFY-RNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHI 207
V L D +R F Y AD L E D + + + I H H
Sbjct: 78 QTQVELH-DNDRVFGDYTEGVMADFALSEE--DYAWLAQYDIVHAAIW---------GHA 125
Query: 208 AAAKAA-KDAGVVLSYDPNLRL--PLW----PSADKAREGILSIWETADIIKISEEEISF 260
A AG + ++D + + PLW P D A + +A
Sbjct: 126 EDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYA-------FASAP----------- 167
Query: 261 LTQGEDPYDDAVVYKLFHANLKLLLVTEGP------DGCRYYTKDFSGRVQGLKVEAVDA 314
ED + + + +++VT G DG +++ V VD
Sbjct: 168 ---QEDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGAQFWR---QAPEP---VTVVDT 218
Query: 315 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362
GAGD+F+AG L L A+ AC A T+ GA
Sbjct: 219 MGAGDSFIAGFLCGWLAG-------MTLPQAMAQGTACAAKTIQYHGA 259
|
Length = 260 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 83/319 (26%), Positives = 121/319 (37%), Gaps = 46/319 (14%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLAD 127
ID V GL+ E A +K GG NVA +ARLG G +G + +
Sbjct: 10 IDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGFLGGFTGEF-IEA 68
Query: 128 ILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------L 181
+L E + + R V ++ E P + E EL+
Sbjct: 69 LLAEEGIKNDFVEVKGETRIN---VKIKESSGEETEL-NEPGP--EISEEELEQLLEKLR 122
Query: 182 SLITKAKIFHY-GSISLITEPCKSAHIAAAKAAKDAGVVL-SYDPNLRLPLWPSADKARE 239
L+ I GS+ P A + A + A V+L + LR L A+
Sbjct: 123 ELLASGDIVVISGSLPPGVPPDFYAQLIAIARKRGAKVILDTSGEALREAL-----AAK- 176
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRY 295
+IK + EE+ L G + + +L + +LV+ G DG
Sbjct: 177 --------PFLIKPNHEELEELF-GRELKTEEEIIEAARELLDRGAENVLVSLGADGALL 227
Query: 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 355
TK+ + + KVE V+ GAGD+ VAG L+ L+ SL +ALRFA A G+
Sbjct: 228 VTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLSLE-------EALRFAVAAGSA 280
Query: 356 TVMERGAIPALPTREAVLN 374
G LP E V
Sbjct: 281 AAFSPGT--GLPDPEDVEE 297
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 2e-14
Identities = 65/294 (22%), Positives = 109/294 (37%), Gaps = 19/294 (6%)
Query: 69 MLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADI 128
+ +D +P G A+S ++ GG NV V +RLG + G +G + +
Sbjct: 14 LDVDKLPASGGDIEAKSKSYVI--GGG-FNVMVAASRLGIPTVNAGPLGNGNWADQIRQA 70
Query: 129 LKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAK 188
+++ + G + DGER F+ A+ +
Sbjct: 71 MRDEGIEILLPP-RGGDDGGCLVALVEPDGERSFISI--SGAEQDWSTEWFATLTVAPYD 127
Query: 189 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA 248
+ +L +E + A AG L +DP R+ P +
Sbjct: 128 YVYLSGYTLASENASKVILLEWLEALPAGTTLVFDPGPRISDIPDTILQA-----LMAKR 182
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGL 307
I + EE + + DP +A +++ ++V G +G D + + G
Sbjct: 183 PIWSCNREEAAIFAERGDPAAEASALRIYAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGF 242
Query: 308 KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
KV+AVD GAGD G+L+ L+ S L DA+ ANA A+ V G
Sbjct: 243 KVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 8e-14
Identities = 84/315 (26%), Positives = 129/315 (40%), Gaps = 50/315 (15%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAES--PA-FKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
+V G ID VSG + + P K++PGG N+A +ARLG S A + VG D
Sbjct: 2 IVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDD 61
Query: 120 EFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
G IL+E+ G +R G TA L DG+ ADM + E
Sbjct: 62 SEGES---ILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVAL-----ADMDIYEL 113
Query: 178 --ELDLSLIT------KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 229
L I K + ++ + A A GV ++++P
Sbjct: 114 LTPDFLRKIREALKEAKPIVVD-ANLP------EEALEYLLALAAKHGVPVAFEP----- 161
Query: 230 LWPSADKAREGILSIWETADIIKISEEEISFLTQ--GEDPYDDAVVYKLFH-ANLKLLLV 286
SA K ++ + + D++ + E+ L E+ D+ K+ +K ++V
Sbjct: 162 --TSAPKLKK-LFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIV 218
Query: 287 TEGPDGCRYYTKDFSGRVQ----GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 342
T G G +++ + V+ TGAGDAFVAG+++ L S L
Sbjct: 219 TLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------L 271
Query: 343 RDALRFANACGALTV 357
D+LRFA A ALT+
Sbjct: 272 DDSLRFAQAAAALTL 286
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-13
Identities = 92/370 (24%), Positives = 133/370 (35%), Gaps = 41/370 (11%)
Query: 32 ASSPLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGL----------- 80
A + R G + KE V G + +D V V L
Sbjct: 48 ARAGARSRARRRLGDTEVGSAAGKEID----VATLGNLCVDIVLPVPELPPPSREERKAY 103
Query: 81 --SLAESPAFKKA-PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137
LA SP KK+ G N A+ ARLG + IG VG + +G L D+L E ++
Sbjct: 104 MEELAASPPDKKSWEAGGNCNFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEEGISVV 163
Query: 138 GM--------RFDPGARTALAFVTLRSDGEREFM----FYRNPS-ADMLLQEAELDLSLI 184
G+ T L +V + F F P+ + + AE +++
Sbjct: 164 GLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISKLSAEAKMAIR 223
Query: 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR-LPLWPSADKAREGILS 243
+F G + P SA +A A D G + +DP R L R +
Sbjct: 224 QSKALFCNGYVFDELSP--SAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEH 281
Query: 244 IWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGR 303
+ +D++ ++ EE LT +P K ++V G G T+
Sbjct: 282 LLRMSDVLLLTSEEAEALTGIRNPILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSC 341
Query: 304 VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363
KV VD G GD+F A I + L + L ANA GA T M GA
Sbjct: 342 APAFKVNVVDTVGCGDSFAAAIA------LGYIHNL-PLVNTLTLANAVGAATAMGCGAG 394
Query: 364 PALPTREAVL 373
+ T E VL
Sbjct: 395 RNVATLEKVL 404
|
Length = 470 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 207 IAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT--QG 264
+ A + A+ GV + DP + E + + DI+ +EEE LT +
Sbjct: 74 LDALEEARRRGVPVVLDPG-----PRAVRLDGEELEKLLPGVDILTPNEEEAEALTGRRD 128
Query: 265 EDPYDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFV 322
+ + A L + K+++VT G G T+ V V+ VD TGAGDAF+
Sbjct: 129 LEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFL 188
Query: 323 AGILSQL 329
A + + L
Sbjct: 189 AALAAGL 195
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 4e-13
Identities = 70/281 (24%), Positives = 102/281 (36%), Gaps = 39/281 (13%)
Query: 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAF 151
GG NVA + LG +G +G G +LKE + + R
Sbjct: 35 AGGKGINVARVLKDLGVEVTALGFLGGF-TGDFFEALLKEEGIPDDFVEVAGETRIN--- 90
Query: 152 VTLRSDGEREFMFYRNPSADMLLQEAELDL---SLITKAKIFHY----GSISLITEPCKS 204
V ++ + E P + + E EL+ L K GS+
Sbjct: 91 VKIKEEDGTETEI-NEPGPE--ISEEELEALLEKLKALLKKGDIVVLSGSLPPGVPADFY 147
Query: 205 AHIAAAKAAKDAGVVLSYD-PNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263
A + K A V+L L L A+ +IK + EE+ L
Sbjct: 148 AELVRLAREKGARVILDTSGEALLAAL-----AAK---------PFLIKPNREELEELFG 193
Query: 264 GEDPYDDAVV---YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDA 320
++ V+ KL + +LV+ G DG TKD R KV+ V GAGD+
Sbjct: 194 RPLGDEEDVIAAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDS 253
Query: 321 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
VAG ++ L+ SL +ALR A A G+ T G
Sbjct: 254 MVAGFVAGLAQGLSLE-------EALRLAVAAGSATAFSPG 287
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 249 DIIKISEEEISFLTQGEDPYD-DAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 305
+IK + EE+ L E D + +L ++ ++V+ G DG T +
Sbjct: 180 WLIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIVSLGADGALLVTAEGVYFAS 239
Query: 306 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG-AIP 364
KV+ V GAGD+ VAG L+ LL+ + L +ALRFA ACGA ++G IP
Sbjct: 240 PPKVQVVSTVGAGDSMVAGFLAG------LLKGKS-LEEALRFAVACGAAAASQKGTGIP 292
Query: 365 ALPTREAVLNAIH 377
L + + +
Sbjct: 293 DLDQLKKIYAQVT 305
|
Length = 310 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 9e-12
Identities = 78/327 (23%), Positives = 123/327 (37%), Gaps = 51/327 (15%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLAD 127
ID + GL+L E + + GG NV+ + LG +G +G + +
Sbjct: 10 IDLTIELDGLTLGEVNRVESTRIDAGGKGINVSRVLKNLGVDVVALGFLGGFTGDF-IEA 68
Query: 128 ILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKA 187
+L+E + +R R V ++ E P + E EL+
Sbjct: 69 LLREEGIKTDFVRVPGETRIN---VKIKEPSGTETKL-NGPGP--EISEEELEA---LLE 119
Query: 188 KIFHY----------GSISLITEPCKSAHIAAAKAAKDAGVVL-SYDPNLRLPLWPSADK 236
K+ GS+ P A + A K A V+L + LR L K
Sbjct: 120 KLRAQLAEGDWLVLSGSLPPGVPPDFYAELIALAREKGAKVILDTSGEALRDGL-----K 174
Query: 237 AREGILSIWETADIIKISEEEISFLTQGE-DPYDDAVVY--KLFHANLKLLLVTEGPDGC 293
A+ +IK ++EE+ L E ++ + +L + +L++ G DG
Sbjct: 175 AK---------PFLIKPNDEELEELFGRELKTLEEIIEAARELLDLGAENVLISLGADGA 225
Query: 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353
TK+ + Q K E V GAGD+ VAG L+ L + SL +ALR A A G
Sbjct: 226 LLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLSLE-------EALRLAVAAG 278
Query: 354 ALTVMERGAIPALPTREAVLNAIHAPV 380
+ G LP E + + V
Sbjct: 279 SAAAFSEGT--GLPDPEDI-EELLPQV 302
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 7e-09
Identities = 68/309 (22%), Positives = 112/309 (36%), Gaps = 57/309 (18%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 148
+ GGA ANVA IA LG +G VG DE G L +L E ++ +G+ D T
Sbjct: 44 EDRLGGA-ANVARNIASLGARVFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTT 102
Query: 149 --LAFVT-----LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIF---HYGSISLI 198
+ LR D E +A++ + + A Y L
Sbjct: 103 TKTRVLARNQQLLRVDFEERDPI----NAELEARLLAAIREQLASADAVVLSDYAKGVLT 158
Query: 199 TEPCKSAHIAAAKAAKDAGVVLSYDPNLR---------LPLWPSADKAREGILSIWETAD 249
+ AA+ G + DP + L + P+ +A + + A+
Sbjct: 159 PRVVQ----EVIAAARKHGKPVLVDPKGKDFSRYRGATL-ITPNRKEAEAAVGACDTEAE 213
Query: 250 IIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGR-VQGLK 308
+++ +E+ + +L+ LLVT G +T++ +
Sbjct: 214 LVQAAEKLLE------------------ELDLEALLVTRSEKGMTLFTREGEPIHIPAQA 255
Query: 309 VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368
E D TGAGD +A + L+ SL + A R ANA + V + G +
Sbjct: 256 REVYDVTGAGDTVIATLALALAAGASLEE-------ACRLANAAAGVVVGKLGTATV--S 306
Query: 369 REAVLNAIH 377
+ NA+
Sbjct: 307 PAELANALQ 315
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 315 |
| >gnl|CDD|182111 PRK09850, PRK09850, pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 6e-08
Identities = 81/315 (25%), Positives = 123/315 (39%), Gaps = 44/315 (13%)
Query: 58 RESPLVVCFGEMLIDFVPTVSGLSLA------ESPA-FKKAPGGAPANVAVGIARLGGSS 110
RE VV G ID V+G S +P K PGG N+A +A LG +
Sbjct: 2 REKDYVVIIGSANID----VAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKA 57
Query: 111 AFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE-----REFMFY 165
+ VG+D +G L ++ V PG T+ L + GE +
Sbjct: 58 WLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNIS 117
Query: 166 RNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY-DP 224
+A+ L Q E I +AK+ I C + A A +A V + DP
Sbjct: 118 NAITAEYLAQHRE----FIQRAKV--------IVADCNISEEALAWILDNAANVPVFVDP 165
Query: 225 NLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN-LKL 283
+ W K R+ + I T ++ E +S + D A V FH + L
Sbjct: 166 ---VSAWKCV-KVRDRLNQI-HTLKPNRLEAETLSGIALS-GREDVAKVAAWFHQHGLNR 219
Query: 284 LLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 342
L+++ G DG Y SG +K ++ TGAGDA +AG+ S
Sbjct: 220 LVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFA------ 273
Query: 343 RDALRFANACGALTV 357
+++RFA C ++ +
Sbjct: 274 -ESVRFAQGCSSMAL 287
|
Length = 313 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 7e-08
Identities = 67/289 (23%), Positives = 111/289 (38%), Gaps = 43/289 (14%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
+V G + ID + T PGG ++ ++RLG + + KVG D
Sbjct: 2 IVIIGHVTIDEIVTNGSG--------VVKPGGPATYASLTLSRLGLTVKLVTKVGRDY-- 51
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
D + NG + T + ++G + + +A + E LS
Sbjct: 52 ---PDKWSDLFDNGIEVISLLSTETTTFELNYTNEGRTRTLLAK-CAAIP---DTESPLS 104
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 242
IT A+I G + I+ + K A + L D L + IL
Sbjct: 105 TIT-AEIVILGPVPE--------EISPSLFRKFAFISL--DAQGFLRRANQEKLIKCVIL 153
Query: 243 SIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG 302
+ D++K+S E ++ P + A + K +K ++VT+G +G + +
Sbjct: 154 KL---HDVLKLSRVEAEVIS---TPTELARLIKET--GVKEIIVTDGEEGGYIFDGNGKY 205
Query: 303 RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
+ K + VD TGAGD F+A L +S L +D A FA A
Sbjct: 206 TIPASKKDVVDPTGAGDVFLAAFL------YSRLSGKDIKE-AAEFAAA 247
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 75/302 (24%), Positives = 112/302 (37%), Gaps = 58/302 (19%)
Query: 88 FKKAPGGAPANVAVGIARLGGSS--------AFIGKVGADEFGYMLADILKENNVNGAGM 139
+K + GG+ +N V +ARLG S A G VG+D G L+ NV+
Sbjct: 121 YKASAGGSLSNTLVALARLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQ 180
Query: 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIF---HY---- 192
G T V D +R + Y+ S+ + S I+K+++ Y
Sbjct: 181 PVKDGT-TGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCL--ASAISKSRVLVVEGYLWEL 237
Query: 193 -GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADI 250
+I I + C+ AH A A A A D + ++ R+ + ADI
Sbjct: 238 PQTIEAIAQACEEAHRAGALVAVTAS-----DVSC-------IERHRDDFWDVMGNYADI 285
Query: 251 IKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE 310
+ + +E L + L+ VT+G G Y G+K E
Sbjct: 286 LFANSDEARALCGLGSEESPESATRYLSHFCPLVSVTDGARGS--YI--------GVKGE 335
Query: 311 A----------VDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360
A VD GAGDA+ AGIL + LL+ LR A A V ++
Sbjct: 336 AVYIPPSPCVPVDTCGAGDAYAAGIL------YGLLRGVSDLRGMGELAARVAATVVGQQ 389
Query: 361 GA 362
G
Sbjct: 390 GT 391
|
Length = 426 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 8e-07
Identities = 73/264 (27%), Positives = 104/264 (39%), Gaps = 41/264 (15%)
Query: 89 KKAPGGAPANVAVGIAR-LGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGART 147
K GG+ AN G++ G S+ IG G DE G + + + V+ + +R G T
Sbjct: 82 KTMAGGSVANTIRGLSAGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGP-T 140
Query: 148 ALAFVTLRSDGEREFMFYRNP--SADMLLQEAELDLSLITKAK--IFHYG--SISLITEP 201
A + + G R P S+ + LQ EL +K + YG ++ +I
Sbjct: 141 AQCVCLVDALGNRTM----RPCLSSAVKLQADELTKEDFKGSKWLVLRYGFYNLEVI--- 193
Query: 202 CKSAHIAAAKAAKDAGVVLSYD-------PNLRLPLWPSADKAREGILSIWETADI--IK 252
AA + AK G+ +S D N R PL L + E+ I
Sbjct: 194 -----EAAIRLAKQEGLSVSLDLASFEMVRNFRSPL-----------LQLLESGKIDLCF 237
Query: 253 ISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEA 311
+E+E L +GE D + +VT G GC RV + A
Sbjct: 238 ANEDEARELLRGEQESDPEAALEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNA 297
Query: 312 VDATGAGDAFVAGILSQLSTDFSL 335
VDATGAGD F +G L L SL
Sbjct: 298 VDATGAGDLFASGFLYGLIKGLSL 321
|
Length = 367 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 79/292 (27%), Positives = 106/292 (36%), Gaps = 79/292 (27%)
Query: 82 LAESPAFKKAPGGAPAN---VAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138
LA + GGA N VA + ++ G+++++G +G D+FG + VN
Sbjct: 41 LASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHY 100
Query: 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS----LITKAKIFHYGS 194
D T V L GER + N SA + L L+ KAK ++
Sbjct: 101 YE-DESTPTGTCAV-LVVGGERSLV--ANLSAANCYKVEHLKKPENWALVEKAKFYYIAG 156
Query: 195 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP------------LWPSAD------- 235
L P +S + A AA + + NL P P D
Sbjct: 157 FFLTVSP-ESIMLVAEHAAANNKT---FMMNLSAPFICEFFKDQLMEALPYVDFLFGNET 212
Query: 236 KAR-----EGILSIWETADI----IKISE--------EEISFLTQGEDPYDDAVVYKLFH 278
+AR +G WET D+ +KIS + +TQG DP A K
Sbjct: 213 EARTFAKVQG----WETEDVEEIALKISALPKASGTHKRTVVITQGADPTVVAEDGK--- 265
Query: 279 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEA-VDATGAGDAFVAGILSQL 329
V E P V L E VD GAGDAFV G LSQL
Sbjct: 266 -------VKEFP-------------VIPLPKEKLVDTNGAGDAFVGGFLSQL 297
|
Length = 332 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 8e-07
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 284 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 343
++VT G GCR Y KD RV VD TGAGD+F+ G ++ L + +
Sbjct: 206 VIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VP 258
Query: 344 DALRFANACGALTVMERGAIPALPTR 369
DA N G+L V + G IP R
Sbjct: 259 DAALLGNYFGSLAVEQVG-IPKFDLR 283
|
Length = 335 |
| >gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (119), Expect = 1e-06
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
PGGA ANVA+ IA LG + +G G DE L+ +L V
Sbjct: 50 PGGA-ANVAMNIASLGAQARLVGLTGIDEAARALSKLLAAVGVK 92
|
Length = 473 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 348
GPDG ++ + ++V VD GAGD F A ++ ++L + D L +AL F
Sbjct: 228 GPDGEYVHSPAH----KPIRV--VDTLGAGDTFNAAVI------YALNKGPDDLSEALDF 275
Query: 349 ANA 351
N
Sbjct: 276 GNR 278
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 68/285 (23%), Positives = 105/285 (36%), Gaps = 52/285 (18%)
Query: 82 LAESPAFKKAPGGAPANVAVGIARLG--------GSSAFIGKVGADEFGYMLADILKENN 133
L P PGG+ N A R+ G ++G VG D F +L + +++
Sbjct: 51 LESIPNVSYVPGGSALNTA----RVAQWMLQAPKGFVCYVGCVGDDRFAEILKEAAEKDG 106
Query: 134 VNGAGMRFD-----PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLI 184
V M F+ P A+ L ER + N A L + I
Sbjct: 107 VE---MLFEYTTKAPTGTCAV----LVCGKERSLV--ANLGAANHLSAEHMQSHAVQEAI 157
Query: 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI 244
A++++ L P +A K A+++G + NL P E +L +
Sbjct: 158 KTAQLYYLEGFFLTVSPNNVLQVA--KHARESGKLFCL--NLSAPFISQFFF--ERLLQV 211
Query: 245 WETADIIKISEEEISFLTQGE----DPYDDAVVYKLFHANLK-------LLLVTEGPDGC 293
DI+ +EEE T + D D + K L++ T+GP+
Sbjct: 212 LPYVDILFGNEEE--AKTFAKAMKWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPT 269
Query: 294 RYYTKDFSGRVQGLKVEA---VDATGAGDAFVAGILSQLSTDFSL 335
TKD V ++ VD GAGDAFV G L+Q + +
Sbjct: 270 LIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDI 314
|
Length = 345 |
| >gnl|CDD|237405 PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 250 IIKISEEEISFLTQGEDPYD----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 305
+IK + EE+S L E D V+ + ++ ++V+ G DG D +V
Sbjct: 180 VIKPNIEELSQLLGKEVSEDLDELKEVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVD 239
Query: 306 GLKVEAVDATGAGDAFVAGILSQLS---TDFSLLQKEDQLRDALRFANACGALTVMER 360
K+E V+ G+GD+ VAGI S L D LL+K AN G L E+
Sbjct: 240 IPKIEVVNPVGSGDSTVAGIASGLLHQEDDADLLKK----------ANVLGMLNAQEK 287
|
Length = 309 |
| >gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 89 KKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGART 147
++ GGA ANVA IA LG ++ +G VG DE G L ++LK N ++ +R D T
Sbjct: 47 EERLGGA-ANVAKNIASLGANAYLVGVVGKDEAGKALIELLKANGIDSDLLR-DKNRPT 103
|
Length = 467 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 100.0 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 99.98 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.97 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 99.97 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.83 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.83 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.82 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.8 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.8 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.8 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.8 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.79 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.79 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.79 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.77 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.75 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.69 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.63 | |
| PLN02978 | 308 | pyridoxal kinase | 99.61 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.61 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.61 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.54 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.53 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.52 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.5 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.49 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.48 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.4 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.38 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.29 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.17 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 99.1 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.79 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.56 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 98.17 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 98.07 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 98.07 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.99 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.87 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 97.8 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 97.65 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.59 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.38 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 97.32 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 97.16 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 97.01 | |
| COG4809 | 466 | Archaeal ADP-dependent phosphofructokinase/glucoki | 92.83 | |
| KOG4184 | 478 | consensus Predicted sugar kinase [Carbohydrate tra | 91.39 | |
| PRK10076 | 213 | pyruvate formate lyase II activase; Provisional | 89.14 |
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-52 Score=395.88 Aligned_cols=322 Identities=80% Similarity=1.267 Sum_probs=282.6
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
.++++|+++|++++|++..+++.+......+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 8 ~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~GI~~~ 87 (330)
T PLN02323 8 AESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGDDEFGHMLADILKKNGVNNE 87 (330)
T ss_pred CCCCcEEEechhhhhhccCCCCCCcccccceeecCCChHHHHHHHHHhcCCceeEEEEecCChhHHHHHHHHHHcCCCCc
Confidence 45578999999999999887776665556678899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++.++++|+|++.+++..+++..+++++++.+.++.++++|++++.+..+........+++.+++.|
T Consensus 88 ~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g 167 (330)
T PLN02323 88 GVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAG 167 (330)
T ss_pred ceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHccCCEEEEechhccCchHHHHHHHHHHHHHHcC
Confidence 99999999999999999889999998876566666778888877788899999998876655555566778899999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+...|.+.+..++.+.++++++|++++|++|++.+++....+.+++. +++..|++.||||+|++|+++++
T Consensus 168 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~-~~~~~g~~~vvvt~G~~G~~~~~ 246 (330)
T PLN02323 168 ALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV-KLWHPNLKLLLVTEGEEGCRYYT 246 (330)
T ss_pred CEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHHHH-HHHhcCCCEEEEecCCCceEEEe
Confidence 99999999988888777777788889999999999999999999987655444444 45567999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++.+++|+++++++||+||||+|+|||++++++|+++..++.++++|+++|+++|++++++.|+...+|++++++++++
T Consensus 247 ~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~~~g~~~~~~~~~~v~~~l~ 326 (330)
T PLN02323 247 KDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTTERGAIPALPTKEAVLKLLK 326 (330)
T ss_pred CCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHhccCCccCCCCHHHHHHHHH
Confidence 88778899999999999999999999999999999864334456899999999999999999999888899999999998
Q ss_pred CCC
Q 016868 378 APV 380 (381)
Q Consensus 378 ~~~ 380 (381)
+.+
T Consensus 327 ~~~ 329 (330)
T PLN02323 327 KAV 329 (330)
T ss_pred Hhc
Confidence 765
|
|
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-51 Score=393.48 Aligned_cols=319 Identities=38% Similarity=0.621 Sum_probs=263.4
Q ss_pred CCcEEEEccceeecccCCCCCCc--c------------CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHH
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSL--A------------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYML 125 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~--~------------~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i 125 (381)
++.|+|||++.+|++........ . ....+...+||++.|+|++|+|||.++.|+|.||+|.+|+++
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~GGa~aNVAvaLARLG~~vafIG~VGdD~fG~~l 204 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRLGGRAAFMGKVGDDDFGEEL 204 (496)
T ss_pred CCeEEEeChhhhhhcCCCcccccccccccccccccccccCCeeEeccCcHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHH
Confidence 35699999999999986432111 0 355688899999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCeeecCCCCceEEEEEec--CCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhH
Q 016868 126 ADILKENNVNGAGMRFDPGARTALAFVTLR--SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCK 203 (381)
Q Consensus 126 ~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~ 203 (381)
++.|+++||+++++.+.++.+|+.+++.++ .+| +.+.++...+++..+.+++++...+++++++|++++.+..+...
T Consensus 205 ~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~g-r~~~~~~~~gA~~~L~~~di~~~~l~~a~ilh~~~~~l~~~~~~ 283 (496)
T PLN02543 205 VLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGG-KMVAETVKEAAEDSLLASELNLAVLKEARMFHFNSEVLTSPSMQ 283 (496)
T ss_pred HHHHHHcCCcccceEecCCCCCceEEEEEEeCCCC-CEEEEecCCCHHHhCChhhcCHhHhCCCceEEECChhhcCchHH
Confidence 999999999999999999999999999874 445 55654445667777888888878899999999999877666667
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC--------CC-------
Q 016868 204 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED--------PY------- 268 (381)
Q Consensus 204 ~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~--------~~------- 268 (381)
+...++++.+++.|++|+||++.|+.+|.+.+..++.+.++++++|++++|++|++.|+|... +.
T Consensus 284 ~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~~~~~~~~~~~~~~~~~ 363 (496)
T PLN02543 284 STLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYYERKRNYPPQYYAESFE 363 (496)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcccccccccchhhhhhhh
Confidence 888999999999999999999999999988777888899999999999999999999998641 00
Q ss_pred -----------hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccc-----cccccCCCCccHHHHHHHHHHHHcC
Q 016868 269 -----------DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL-----KVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 269 -----------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-----~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
..+.+..+.+.|++.||||+|++|+++++++....++.. +..+||||||||+|.|||+++|+++
T Consensus 364 ~~~~~~~~~~~~~~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~~~VDTTGAGDAF~AGfL~~Ll~~ 443 (496)
T PLN02543 364 QTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITPFTCDRTGSGDAVVAAIMRKLTTC 443 (496)
T ss_pred hhhcccccccCCHHHHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCCCCCcCCCchHHHHHHHHHHHHHhc
Confidence 113345677789999999999999999986422222111 1125899999999999999999963
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhCC
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~~ 379 (381)
.....++.++++|+++|+++||+++++.|+.+++|++++|+++++++
T Consensus 444 ~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~ 490 (496)
T PLN02543 444 PEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQV 490 (496)
T ss_pred cccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhh
Confidence 21111122399999999999999999999999999999999999885
|
|
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-50 Score=392.01 Aligned_cols=314 Identities=31% Similarity=0.558 Sum_probs=264.6
Q ss_pred CcEEEEccceeecccCCCCCC--------------ccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHH
Q 016868 61 PLVVCFGEMLIDFVPTVSGLS--------------LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLA 126 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~ 126 (381)
+.|+|||++++|+++...... ..++..+...+||++.|+|++|+|||.++.|+|.||+|.+|++++
T Consensus 197 ~~V~~iGe~l~D~~p~g~~~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLARLG~~v~fIg~VGdD~~G~~ll 276 (581)
T PLN02967 197 PLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASLGGKVAFMGKLGDDDYGQAML 276 (581)
T ss_pred CeEEEECchhheecccCccchhhhhccccccccccccCccceeeecCcHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHH
Confidence 569999999999977421110 114567888999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHH
Q 016868 127 DILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAH 206 (381)
Q Consensus 127 ~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~ 206 (381)
+.|+++||+++++++.++.+|+++++.++++|++.+.+ +.++++..+..+++....+.+++++|++++.+..+...+.+
T Consensus 277 ~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~-~~~gAd~~L~~~di~~~~l~~A~i~hfgg~~ll~e~~~~al 355 (581)
T PLN02967 277 YYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTC-VKPCAEDSLSKSEINIDVLKEAKMFYFNTHSLLDPTMRSTT 355 (581)
T ss_pred HHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEE-ecCChhhhCChhhcCHhHhcCCCEEEEeCchhcccchHHHH
Confidence 99999999999999988889999999999999987753 35777778888888877889999999999876667778889
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---------------hHH
Q 016868 207 IAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---------------DDA 271 (381)
Q Consensus 207 ~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---------------~~~ 271 (381)
..+++.+++.|++|+||++.++++|.+.+..++.+.++++++|+|++|++|+..|+|..... ..+
T Consensus 356 l~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e~~~~~~~~~~~~~~~~e 435 (581)
T PLN02967 356 LRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSKFVHYSPE 435 (581)
T ss_pred HHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCccccccccccchhccccchHH
Confidence 99999999999999999999999998777777888999999999999999999999864311 123
Q ss_pred HHHHHHhcCCCEEEEEecCCceEEEeCCc---eEEEcccccc--ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHH
Q 016868 272 VVYKLFHANLKLLLVTEGPDGCRYYTKDF---SGRVQGLKVE--AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 346 (381)
Q Consensus 272 ~~~~l~~~g~~~vvvt~G~~G~~~~~~~~---~~~~~~~~v~--vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al 346 (381)
.+..+...|++.||||+|++|++++.+++ ...+++++++ +||||||||+|+|||+++|+++.....+..++++|+
T Consensus 436 ~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL~~Ll~g~~~~~g~~~LeeaL 515 (581)
T PLN02967 436 VVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLMRMLTVQPHLITDKGYLEKTI 515 (581)
T ss_pred HHHHHHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHHHHHHhccCcccccccHHHHH
Confidence 45566677999999999999999998754 3334555666 599999999999999999998521111112399999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 347 RFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 347 ~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
++|+++||++++..|+.+++|++++|++.
T Consensus 516 rfAnAaAAL~vt~~GA~~glPt~~eV~~~ 544 (581)
T PLN02967 516 KYAIDCGVIDQWLLARTRGFPPKEDMEDE 544 (581)
T ss_pred HHHHHHHHHHhccCCCccCCCCHHHHhhh
Confidence 99999999999999999999999999754
|
|
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=387.33 Aligned_cols=311 Identities=26% Similarity=0.328 Sum_probs=256.8
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCC---------------CCccccCCChHHHHHHHHHHcCCceEEEeecCCChHH
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAES---------------PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~---------------~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g 122 (381)
.++++|+++|++++|++..++..|.... ......+|| +.|+|++|++||.++.++|.||+|.+|
T Consensus 70 ~~~~~vl~lG~~~vD~i~~V~~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLarLG~~v~lig~VG~D~~G 148 (470)
T PLN02341 70 GKEIDVATLGNLCVDIVLPVPELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAAARLGLRCSTIGHVGDEIYG 148 (470)
T ss_pred cccccEEEECCcceeEEEecCCCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHHHHcCCCeEEEEEecCcHHH
Confidence 4567999999999999999888876532 223445688 689999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCeeecC--------CCCceEEEEEecCCCCceEEEecCCCccccCC-hhcc---chhhcCCccEE
Q 016868 123 YMLADILKENNVNGAGMRFDP--------GARTALAFVTLRSDGEREFMFYRNPSADMLLQ-EAEL---DLSLITKAKIF 190 (381)
Q Consensus 123 ~~i~~~l~~~gi~~~~v~~~~--------~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l---~~~~i~~~~~~ 190 (381)
+++++.|++.||+++++...+ ...|+.++++++++|++.+....+........ ...+ ..+.+++++++
T Consensus 149 ~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~adiv 228 (470)
T PLN02341 149 KFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISKLSAEAKMAIRQSKAL 228 (470)
T ss_pred HHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchhhhhcccHHHHhhhhcCCEE
Confidence 999999999999999887665 35799999999999998765321111110000 0011 12567899999
Q ss_pred EEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC-CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh
Q 016868 191 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL-PLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD 269 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~ 269 (381)
|++++.. .+.+.+.+.++++.+++.|+++++|++++. .+|.+.+..++.+.++++++|++++|++|++.+++... .
T Consensus 229 ~lsg~~~-~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~~l~g~~~--~ 305 (470)
T PLN02341 229 FCNGYVF-DELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAEALTGIRN--P 305 (470)
T ss_pred EEeceeC-CcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCC--H
Confidence 9998753 345667888999999999999999998764 34444444556688899999999999999999998743 3
Q ss_pred HHHHHHHHhcC--CCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 016868 270 DAVVYKLFHAN--LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 347 (381)
Q Consensus 270 ~~~~~~l~~~g--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~ 347 (381)
+++++.+++.+ .+.||||+|++|++++++++.+++|+++++++|||||||+|+|||++++++|++ +++|++
T Consensus 306 ~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl~gll~G~~-------l~eal~ 378 (470)
T PLN02341 306 ILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALGYIHNLP-------LVNTLT 378 (470)
T ss_pred HHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 66777887776 589999999999999999988999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCHHHHHHHHhCC
Q 016868 348 FANACGALTVMERGAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 348 ~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~~ 379 (381)
+|+++|++++++.|+..++|++++|++++++.
T Consensus 379 ~A~a~aA~~v~~~Ga~~~~p~~~ev~~~l~~~ 410 (470)
T PLN02341 379 LANAVGAATAMGCGAGRNVATLEKVLELLRAS 410 (470)
T ss_pred HHHHHHHHHHcCcCCCCCCCCHHHHHHHHHhc
Confidence 99999999999999999999999999988753
|
|
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-49 Score=353.92 Aligned_cols=315 Identities=56% Similarity=0.901 Sum_probs=285.7
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.++.|+|+|++++|+++.....|.. .+..+...+||++.|+|++++|||.++.+||+||+|.||..+.+.|+++||
T Consensus 8 ~~~~vv~fGs~~~D~V~~~~~~p~~ge~~~~~~f~~~~GG~~aN~AvaaarLG~~~afiGkvGdD~fG~~l~~~L~~~~V 87 (330)
T KOG2855|consen 8 EPPLVVVFGSMLIDFVPSTRRLPNAGETWEPPGFKTAPGGKGANQAVAAARLGGRVAFIGKVGDDEFGDDLLDILKQNGV 87 (330)
T ss_pred CCceEEEeccceeeeeeccccCCCccccccCCcceecCCCcchhhhhHHHhcCcceeeeecccchhhHHHHHHHHhhCCc
Confidence 4578999999999999999999887 788899999999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
+++++..+++.+|+..++.+..+|++.+.+++++...+...+.++..+.++.+.++|+.+..+............++.++
T Consensus 88 ~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~ak~~~~q~ei~~~~~~~s~~~~~~~~~~ 167 (330)
T KOG2855|consen 88 DTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKEAKVFHCQSEILIEEPMRSLHIAAVKVAK 167 (330)
T ss_pred ccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhhccEEEEeeecCCcchhHHHHHhhhhhhh
Confidence 99999999999999999999999999999998888877777778888999999999999887777777666666677888
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceE
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
+.+..+++||+.+.++|+.....+..+..++..+|++.+..+|++.++|... +++. .|++.+.+.||||+|++||+
T Consensus 168 ~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~---~~~~-~L~~~~~k~viVTlG~kG~~ 243 (330)
T KOG2855|consen 168 NAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED---DKIL-KLWHMKLKLVIVTLGEKGCR 243 (330)
T ss_pred cccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc---chHH-HHhccCCCEEEEEeCCCceE
Confidence 9998899999999999998877777788999999999999999999998833 3334 77788889999999999999
Q ss_pred EEeCCceE-EEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 295 YYTKDFSG-RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 295 ~~~~~~~~-~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+|+++..- ++|++.|++||||||||+|+|||+.+|.+| ++.. ...+++++++|+++++.+++++|+.+++|++++++
T Consensus 244 y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~-~~~~-~~~L~~~l~~A~a~~ai~v~~~Ga~~s~p~~~~~~ 321 (330)
T KOG2855|consen 244 YYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRG-SLLP-ELSLEEALRFANACGAITVQRKGAIPSMPTEKEVQ 321 (330)
T ss_pred EEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhc-cccc-hHHHHHHHHHHHHhhhHHhhccCCCccCccHHHHH
Confidence 99988555 999999999999999999999999999999 4433 67799999999999999999999999999999999
Q ss_pred HHHhCC
Q 016868 374 NAIHAP 379 (381)
Q Consensus 374 ~~l~~~ 379 (381)
+.+...
T Consensus 322 ~~~~~~ 327 (330)
T KOG2855|consen 322 SLLKSS 327 (330)
T ss_pred HHhhhc
Confidence 887653
|
|
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-48 Score=359.11 Aligned_cols=302 Identities=40% Similarity=0.655 Sum_probs=259.7
Q ss_pred CCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
+.+|+++|++++|+++... ......+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|+++||+++++
T Consensus 2 ~~~il~iG~~~iD~~~~~~-------~~~~~~~GG~~~N~a~~l~~LG~~~~~v~~vG~D~~g~~i~~~l~~~gI~~~~~ 74 (304)
T PRK09434 2 MNKVWVLGDAVVDLIPEGE-------NRYLKCPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYL 74 (304)
T ss_pred CCcEEEecchheeeecCCC-------CceeeCCCChHHHHHHHHHHcCCCceEEEEecCchHHHHHHHHHHHcCCCCcce
Confidence 4589999999999985421 234668999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
...++.+|+.+++.++++|+|++.+...++++..++.++++ .+++++++|++++.+..+..++...++++.+++.+.+
T Consensus 75 ~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (304)
T PRK09434 75 RLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP--PFRQGEWLHLCSIALSAEPSRSTTFEAMRRIKAAGGF 152 (304)
T ss_pred EEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh--hhcCCCEEEEccccccCchHHHHHHHHHHHHHHcCCE
Confidence 98888999999999988899988766555555555555553 3678999999987665555567777899999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHh-cCCCEEEEEecCCceEEEeC
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTK 298 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~ 298 (381)
+++|++.+...|...+..++.+.++++++|++++|++|++.+++... .+++++.+.+ .+++.||||+|++|++++++
T Consensus 153 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~~--~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~ 230 (304)
T PRK09434 153 VSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQ--LEDAIYALADRYPIALLLVTLGAEGVLVHTR 230 (304)
T ss_pred EEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCCC--HHHHHHHHHhhcCCcEEEEEecCCceEEEeC
Confidence 99999988878877777788888999999999999999999998653 3667788876 78999999999999999998
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++.+++|+++++++|||||||+|+|||+++|++|++. .++.++++|+++|+++|++++++.|+...+|++++++
T Consensus 231 ~~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~-~~~~~~~~a~~~a~~~Aa~~v~~~g~~~~~~~~~~~~ 304 (304)
T PRK09434 231 GQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLW-TDEAELAEIIAQAQACGALATTAKGAMTALPNRQELE 304 (304)
T ss_pred CceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCc-cchHHHHHHHHHHHHHHHHHHcccCCcCCCCChHHcC
Confidence 8888999999999999999999999999999999731 1223499999999999999999999988888887763
|
|
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-47 Score=356.49 Aligned_cols=293 Identities=28% Similarity=0.374 Sum_probs=252.6
Q ss_pred CcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
.+|+|+|++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 3 ~~i~~iG~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gV~~ 82 (306)
T PRK11142 3 GKLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGIDT 82 (306)
T ss_pred CcEEEECCceeeEEEEeCCCCCCCCeeEeccceecCCCcHHHHHHHHHhcCCcEEEEEEECCChhHHHHHHHHHHcCCCh
Confidence 47999999999999888776554 23456788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
+++...++.+|+++++.++.+|+|++..+ .++...+++++++. +.+.+++++|+++. .+.+.+.++++.++
T Consensus 83 ~~i~~~~~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~ 155 (306)
T PRK11142 83 APVSVIKGESTGVALIFVNDEGENSIGIH--AGANAALTPALVEAHRELIANADALLMQLE-----TPLETVLAAAKIAK 155 (306)
T ss_pred hhEEEcCCCCCCEEEEEECCCCCEEEEEe--CCccccCCHHHHHHHHhhhccCCEEEEeCC-----CCHHHHHHHHHHHH
Confidence 99998888899999999998999998876 34555577766652 55889999987642 24567778899999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD 291 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~ 291 (381)
+.|+++++|++....+ ...+++++|++++|++|++.+++....+. .++++.+.+.|++.||||+|++
T Consensus 156 ~~g~~v~~d~~~~~~~----------~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~ 225 (306)
T PRK11142 156 QHGTKVILNPAPAREL----------PDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSR 225 (306)
T ss_pred HcCCEEEEECCCCccc----------CHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 9999999999743221 23578899999999999999998654332 3456777788999999999999
Q ss_pred ceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHH
Q 016868 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 371 (381)
Q Consensus 292 G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~ 371 (381)
|++++.+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+.+.+|+.++
T Consensus 226 G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~~~~ 298 (306)
T PRK11142 226 GVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-------LPEAIRFAHAAAAIAVTRKGAQPSIPWREE 298 (306)
T ss_pred cEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCcccccCCCHHH
Confidence 9999988888899999999999999999999999999999999 999999999999999999999877899999
Q ss_pred HHHHHh
Q 016868 372 VLNAIH 377 (381)
Q Consensus 372 v~~~l~ 377 (381)
++++++
T Consensus 299 ~~~~~~ 304 (306)
T PRK11142 299 IDAFLQ 304 (306)
T ss_pred HHHHHh
Confidence 988765
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-47 Score=356.04 Aligned_cols=301 Identities=26% Similarity=0.349 Sum_probs=255.1
Q ss_pred CCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
..+++|+|+|.+++|++..+++.+.. ....+...+||.+.|+|++|++||.++.++|.||+|.+|+.+++.|++.|
T Consensus 13 ~~~~~vlviG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~vG~D~~g~~i~~~l~~~G 92 (326)
T PTZ00292 13 EAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNG 92 (326)
T ss_pred CCCCCEEEEccceeeEEEecCCCCCCCCceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEEECCChhHHHHHHHHHHcC
Confidence 44578999999999999988876554 23345788999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEec-CCCCceEEEecCCCccccCChhccch--hhcCC-ccEEEEccccccCchhHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDL--SLITK-AKIFHYGSISLITEPCKSAHIAA 209 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
|+++++...++.+|++++++++ .+|++++.++ ++++..++++.++. ..+.. ++++++.+ ..+.+...++
T Consensus 93 I~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~ 165 (326)
T PTZ00292 93 VNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGANNALTPQMVDAQTDNIQNICKYLICQN-----EIPLETTLDA 165 (326)
T ss_pred CChhhEEEcCCCCCcEEEEEEeCCCCceEEEEe--CCccccCCHHHHHHHHHHhhhhCCEEEECC-----CCCHHHHHHH
Confidence 9999998888889999999998 7899988876 44555677766653 34566 88887653 2345677788
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEE
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLV 286 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvv 286 (381)
++.++++|+++++|++.+...|. .+.+.++++++|++++|++|++.+++....+. .++.+.+.+.+++.|||
T Consensus 166 ~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvv 240 (326)
T PTZ00292 166 LKEAKERGCYTVFNPAPAPKLAE-----VEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVII 240 (326)
T ss_pred HHHHHHcCCEEEEECCCCccccc-----cccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCeEEE
Confidence 99999999999999986554332 24677888999999999999999998654332 24556777889999999
Q ss_pred EecCCceEEEeCCc-eEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 016868 287 TEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 365 (381)
Q Consensus 287 t~G~~G~~~~~~~~-~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~ 365 (381)
|+|++|++++.+++ .+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+...
T Consensus 241 T~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~Aa~~v~~~G~~~~ 313 (326)
T PTZ00292 241 TLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-------LKESCKRANRIAAISVTRHGTQSS 313 (326)
T ss_pred EeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHcCCCCcccc
Confidence 99999999998764 4889999999999999999999999999999999 999999999999999999999988
Q ss_pred CCCHHHHHHHHh
Q 016868 366 LPTREAVLNAIH 377 (381)
Q Consensus 366 ~~~~~~v~~~l~ 377 (381)
+|+.+++++.++
T Consensus 314 ~~~~~~~~~~~~ 325 (326)
T PTZ00292 314 YPHPSELPADVK 325 (326)
T ss_pred CCCHHHHHHHhc
Confidence 899999988775
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=363.19 Aligned_cols=306 Identities=23% Similarity=0.243 Sum_probs=254.2
Q ss_pred CCCCcEEEEccceeecccCCCC-------CCccC-----------------CCCccccCCChHHHHHHHHHHcC------
Q 016868 58 RESPLVVCFGEMLIDFVPTVSG-------LSLAE-----------------SPAFKKAPGGAPANVAVGIARLG------ 107 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~-------~~~~~-----------------~~~~~~~~GG~~~NvA~~la~LG------ 107 (381)
.+.++|+++|++++|++..++. .|... ...+...+||++.|+|++|+|||
T Consensus 67 ~~~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~AvalarLG~~~~~~ 146 (426)
T PLN02813 67 PERWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALARLGSQSAAG 146 (426)
T ss_pred CCcceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHHhccccccC
Confidence 3558999999999999988877 55432 23467889999999999999999
Q ss_pred --CceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcC
Q 016868 108 --GSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLIT 185 (381)
Q Consensus 108 --~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~ 185 (381)
.+|.++|.||+|.+|+++++.|++.||++.++.+. +.+|+.++++++++|+|+++.++ +++..++.+++..+.++
T Consensus 147 ~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~-~~~Tg~~~ilv~~~gertii~~~--Ga~~~l~~~~~~~~~i~ 223 (426)
T PLN02813 147 PALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVK-DGTTGTVIVLTTPDAQRTMLSYQ--GTSSTVNYDSCLASAIS 223 (426)
T ss_pred CCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecC-CCCceEEEEEEcCCCCceeeecc--CchhhCCccccCHHHHh
Confidence 79999999999999999999999999999987654 55899999999999999998874 44445666566567789
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHH-HHHHHHhhhCCEEecCHHHHhhccCC
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR-EGILSIWETADIIKISEEEISFLTQG 264 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~-~~~~~~l~~~dvl~~N~~E~~~l~~~ 264 (381)
+++++|+.++.+..+...+.+.++++.++++|+++++|+..... ....+ .....+++++|++++|++|++.|++.
T Consensus 224 ~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~----~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~ 299 (426)
T PLN02813 224 KSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSC----IERHRDDFWDVMGNYADILFANSDEARALCGL 299 (426)
T ss_pred cCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcch----hhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCC
Confidence 99999998865433334567888999999999999999863211 01112 23345568999999999999999986
Q ss_pred CCC-ChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCC-ccccchHHH
Q 016868 265 EDP-YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF-SLLQKEDQL 342 (381)
Q Consensus 265 ~~~-~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~-~~~~~~~~l 342 (381)
... +.+++.+.+ ..+++.||||+|++|++++.+++.+++|++++++||||||||+|+|||++++++|+ + +
T Consensus 300 ~~~~~~~~a~~~L-~~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Agfl~~l~~G~~~-------l 371 (426)
T PLN02813 300 GSEESPESATRYL-SHFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRGVSD-------L 371 (426)
T ss_pred CCCCCHHHHHHHH-HcCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHHHHHHHHcCCCC-------H
Confidence 432 234555555 46899999999999999999888999999999999999999999999999999999 8 9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 343 RDALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 343 ~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
++|+++|+++|++++++.|+..++|+.+++.+.++.
T Consensus 372 ~~al~~A~a~Aa~~v~~~Ga~~~~~~~~e~~~~~~~ 407 (426)
T PLN02813 372 RGMGELAARVAATVVGQQGTRLRVEDAVELAESFAL 407 (426)
T ss_pred HHHHHHHHHHHHHHHcccCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887754
|
|
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=348.91 Aligned_cols=294 Identities=56% Similarity=0.897 Sum_probs=248.6
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|+|+|++++|++...++. .......+||++.|+|.++++||.++.++|.+|+|.+|+++++.|++.||+++++.+
T Consensus 1 ~ilviG~~~~D~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~ 76 (295)
T cd01167 1 KVVCFGEALIDFIPEGSGA----PETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGIQF 76 (295)
T ss_pred CEEEEcceeEEEecCCCCC----CccccccCCCcHHHHHHHHHhcCCCeEEEEeecCcHHHHHHHHHHHHcCCCchheee
Confidence 5999999999999876543 445678899999999999999999999999999999999999999999999999987
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEE
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 221 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~ 221 (381)
.++.+|+.++++++++|+|++.+++..........+ +..+.++++++++++++.+.++...+...++++.+++.+++++
T Consensus 77 ~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 155 (295)
T cd01167 77 DPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTE-LNPDLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLIS 155 (295)
T ss_pred cCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCcc-CChhHhccCCEEEEechhhccchHHHHHHHHHHHHHHcCCEEE
Confidence 888899999999988899998886443322212221 3446788999999988755555556778889999999999999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCCce
Q 016868 222 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301 (381)
Q Consensus 222 ~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 301 (381)
+|++.+..+|.......+.+.++++++|++++|++|++.+++.... +++.+.+.+.+++.+|||+|++|++++++++.
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~--~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 233 (295)
T cd01167 156 FDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDP--EEIAALLLLFGLKLVLVTRGADGALLYTKGGV 233 (295)
T ss_pred EcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCCH--HHHHHHHhhcCCCEEEEecCCcceEEEECCcc
Confidence 9998777677665556777888999999999999999999987543 45667788899999999999999999998888
Q ss_pred EEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 302 ~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+++|+++++++|||||||+|+|||+++|++|+...-+++++++|+++|+++|++++++.|+
T Consensus 234 ~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 234 GEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred eeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHhhHHHhcccCC
Confidence 9999999999999999999999999999999800000112999999999999999999986
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=345.78 Aligned_cols=302 Identities=41% Similarity=0.571 Sum_probs=261.4
Q ss_pred cEEEEccceeecccC-CCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 62 LVVCFGEMLIDFVPT-VSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 62 ~vlviG~~~iD~~~~-~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+|+++|++++|++.. .+..|.. .....++.+||++.|+|+++++||.++.++|.||+|.+|+++++.|++.||++
T Consensus 1 ~v~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~lG~~~~~~~~vG~D~~g~~~~~~l~~~GVd~ 80 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGAVGDDDFGEFLLEELRKEGVDT 80 (311)
T ss_pred CEEEECchhhheehhhccCCCCCcccccccceeecCCchHHHHHHHHHHcCCceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence 489999999999986 3333332 12236788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+++....+.+|+.+++.++++|+|.+.+++.. +...++++.+++..+..++++|++++.+.... +...++++.+++.
T Consensus 81 ~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~a~~~ 157 (311)
T COG0524 81 SHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPEDLDEDELAGADVLHISGIQLEIPP--EALLAALELAKAA 157 (311)
T ss_pred ceEEEcCCCcceEEEEEEcCCCceeEEEECCc-ccccCChHHcChHHHhhcCeeeEEEeecCCCh--HHHHHHHHHHHHc
Confidence 99999988899999999999999999998654 56668888887677889999999987653332 7888999999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
|.++++|+++++..|. ++.+.++++++|++++|++|++.+++. ..+..+....++..+++.+|||+|++|++++
T Consensus 158 g~~v~~d~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~-~~~~~~~~~~~~~~~~~~vvvt~G~~Ga~~~ 231 (311)
T COG0524 158 GVTVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLTGL-EEDAEAAAALLLAKGVKTVVVTLGAEGAVVF 231 (311)
T ss_pred CCeEEEecCCCccccc-----hhhHHHHHhhCCEEeCCHHHHHHHhCC-CccHHHHHHHHhhcCCCEEEEEeCCCcEEEE
Confidence 9999999999988775 567778899999999999999999987 2223344466778999999999999999999
Q ss_pred eCCc---eEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 297 TKDF---SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 297 ~~~~---~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+.+. ....+++++++||||||||+|.|||+++|++|++ +++|+++|+++|++++++.|+...+|+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-------~~~a~~~a~a~aa~~~~~~g~~~~~p~~~~~~ 304 (311)
T COG0524 232 TGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAALAVTRPGARPSLPTREEVE 304 (311)
T ss_pred eCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccCCCCCCCCCHHHHH
Confidence 9864 3333477789999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHhCC
Q 016868 374 NAIHAP 379 (381)
Q Consensus 374 ~~l~~~ 379 (381)
.++++.
T Consensus 305 ~~~~~~ 310 (311)
T COG0524 305 AFLEEL 310 (311)
T ss_pred HHHhcc
Confidence 988753
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-46 Score=348.94 Aligned_cols=288 Identities=28% Similarity=0.372 Sum_probs=246.5
Q ss_pred CcEEEEccceeecccCCCCCCcc----C------C-----------CCccccCCChHHHHHHHHHHcCCceEEEeecCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA----E------S-----------PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~----~------~-----------~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D 119 (381)
.+|+|+|++++|++..++..|.. + . ......+||++.|+|.+|++||.++.++|.+|+|
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D 81 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIRGAAALGGSAAFIGRVGDD 81 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHHhcCccccCCCHHHHHHHHHHHhcCCeEEEEEeccC
Confidence 46999999999999988877632 0 1 1357889999999999999999999999999999
Q ss_pred hHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccC
Q 016868 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 199 (381)
Q Consensus 120 ~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 199 (381)
.+|+++++.|+++||+++++... +.+|+.++++++++|+|++..+ .+++..++.+++..+.+++++++|++++.+..
T Consensus 82 ~~g~~i~~~l~~~GV~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~ 158 (312)
T cd01168 82 KLGDFLLKDLRAAGVDTRYQVQP-DGPTGTCAVLVTPDAERTMCTY--LGAANELSPDDLDWSLLAKAKYLYLEGYLLTV 158 (312)
T ss_pred hhHHHHHHHHHHCCCccccccCC-CCCceEEEEEEcCCCceeeecc--cchhhcCChhHCCHHHHccCCEEEEEEEecCC
Confidence 99999999999999999988764 5789999999999999988765 45666688888877788999999998864322
Q ss_pred chhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhc
Q 016868 200 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 279 (381)
Q Consensus 200 ~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~ 279 (381)
+.+....+++.+++.|+++++|++... .....++.+.++++++|++++|++|++.+++....+..++++.+++.
T Consensus 159 --~~~~~~~~~~~a~~~g~~v~~d~~~~~----~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~~~~~~a~~l~~~ 232 (312)
T cd01168 159 --PPEAILLAAEHAKENGVKIALNLSAPF----IVQRFKEALLELLPYVDILFGNEEEAEALAEAETTDDLEAALKLLAL 232 (312)
T ss_pred --CHHHHHHHHHHHHHcCCEEEEeCCcHH----HHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCCCCCChHHHHHHHHhc
Confidence 237788889999999999999996311 11234556778899999999999999999986333345678888899
Q ss_pred CCCEEEEEecCCceEEEeCCceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 280 NLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 280 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+++.||||+|++|++++++++.+++|+++ +++||||||||+|+|||++++++|++ +++|+++|+++|+++++
T Consensus 233 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~-------~~~a~~~a~~~Aa~~v~ 305 (312)
T cd01168 233 RCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP-------LEECIRLGSYAAAEVIQ 305 (312)
T ss_pred CCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 99999999999999999988888999998 89999999999999999999999999 99999999999999999
Q ss_pred hcCCCC
Q 016868 359 ERGAIP 364 (381)
Q Consensus 359 ~~G~~~ 364 (381)
+.|+.+
T Consensus 306 ~~G~~~ 311 (312)
T cd01168 306 QLGPRL 311 (312)
T ss_pred ccCCCC
Confidence 999763
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=353.76 Aligned_cols=330 Identities=19% Similarity=0.220 Sum_probs=259.1
Q ss_pred CCCccccC----CCCcccccccccCCCCCCCCccCCCCCcEEEEccceeecccCCCCCCc-------cC-----------
Q 016868 27 HPTIKASS----PLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSL-------AE----------- 84 (381)
Q Consensus 27 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlviG~~~iD~~~~~~~~~~-------~~----------- 84 (381)
+|+.+.|. .+.+++++.+-.| -+++ +..+|+++|+.++|+...++...+ ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~ 75 (434)
T PRK15074 3 FPGQRKSKHYFPVNARDPLLQQIQP---ENET----SRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEA 75 (434)
T ss_pred CCcccccccccccCCCCcccccccc---ccCC----CCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHH
Confidence 45555432 5678899998888 3343 335899999999999977653211 10
Q ss_pred ------CCC--ccccCCChHHHHHHHHHHcC-CceEEEeecCCC-hHHHHHHHHHH--HCCCCCCCeeecCCCCceEEEE
Q 016868 85 ------SPA--FKKAPGGAPANVAVGIARLG-GSSAFIGKVGAD-EFGYMLADILK--ENNVNGAGMRFDPGARTALAFV 152 (381)
Q Consensus 85 ------~~~--~~~~~GG~~~NvA~~la~LG-~~v~li~~vG~D-~~g~~i~~~l~--~~gi~~~~v~~~~~~~t~~~~~ 152 (381)
... ....+||++.|+|++|++|| .++.++|.||+| .+|+++++.|+ +.||+++++...+ .+|+.+++
T Consensus 76 l~~~l~~~~~~~~~~~GGsaaNtA~~lArLGG~~~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~-~~TG~~~V 154 (434)
T PRK15074 76 LYQELKQNNLITHEFAGGTIGNTLHNYSVLADDRSVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVD-GPIGRCFT 154 (434)
T ss_pred HHHHHhhccccccccCCCHHHHHHHHHHHcCCCCeEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcC-CCCEEEEE
Confidence 001 35569999999999999996 999999999999 79999999997 6899999987654 48999999
Q ss_pred EecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEcccccc---CchhHHHHHHHHHHHHHCCCeEEEeCCCCCC
Q 016868 153 TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI---TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 229 (381)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~ 229 (381)
+++++|+|++..+ .+++..+++++++.+.+++++++|++++.+. .+...+...++++.+++.|++|++|++.+..
T Consensus 155 lV~~dGeRt~~t~--~GA~~~Lt~edld~~~i~~a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~ 232 (434)
T PRK15074 155 LISEDGERTFAIS--PGHMNQLRPESIPEDVIAGASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFV 232 (434)
T ss_pred EECCCCCEEEEEe--cChhhcCChhHCCHhHhccCCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhh
Confidence 9999999999987 4677788998888888999999999998654 2344678889999999999999999987654
Q ss_pred CCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCC-------ce-
Q 016868 230 LWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-------FS- 301 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~-------~~- 301 (381)
++...+.+. ..+++++|++++|++|++.|++..+ .+++++.+.+ +++.||||+|++|++++..+ ..
T Consensus 233 v~~~~~~~~---e~l~~~vDILf~NeeEa~~LtG~~d--~eea~~~L~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~ 306 (434)
T PRK15074 233 IEDNPQWWQ---EFLKEHVSILAMNEDEAEALTGESD--PLLASDKALD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQH 306 (434)
T ss_pred ccccHHHHH---HHHHhcCCEEEcCHHHHHHHhCCCC--HHHHHHHHHc-CCCEEEEEECCCCEEEEecccccccCceee
Confidence 443332222 3456799999999999999998643 4567777764 58999999999999997522 11
Q ss_pred -------------------------------EEEccc---cccccCCCCccHHHHHHHHHHHHcCC-cc-----------
Q 016868 302 -------------------------------GRVQGL---KVEAVDATGAGDAFVAGILSQLSTDF-SL----------- 335 (381)
Q Consensus 302 -------------------------------~~~~~~---~v~vvdttGAGDaF~ag~l~~l~~g~-~~----------- 335 (381)
.++|++ ++++||||||||+|+|||+|+|++|+ +.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~ 386 (434)
T PRK15074 307 PLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKR 386 (434)
T ss_pred eccccccccccchhcccchhccccccccccccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccc
Confidence 278888 78999999999999999999999997 00
Q ss_pred -ccchHHHHHHHHHHHHHHHHHhhhcCC--CCCCCCHHHH
Q 016868 336 -LQKEDQLRDALRFANACGALTVMERGA--IPALPTREAV 372 (381)
Q Consensus 336 -~~~~~~l~~al~~A~~~Aa~~~~~~G~--~~~~~~~~~v 372 (381)
.....++.+|+++|+++|+..+++.|+ .+++|+.++-
T Consensus 387 ~~~~~~~l~~~~~~~~~~a~~vi~~~G~~~~~~~p~~~~~ 426 (434)
T PRK15074 387 TYLTYSSLAQVCKYANRVSYEVLNQHSPRLSRGLPEREDS 426 (434)
T ss_pred cccccCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccch
Confidence 001113999999999999999999999 5567776654
|
|
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-45 Score=339.52 Aligned_cols=291 Identities=39% Similarity=0.582 Sum_probs=246.5
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|+|+|++++|++...++.. ..+......+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++++.+
T Consensus 1 ~i~~iG~~~iD~~~~~~~~~-~~~~~~~~~~GG~~~N~a~~la~lg~~~~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~ 79 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGGRL-EQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRV 79 (294)
T ss_pred CeEEechhheeeecCCCCcc-chhhccccccCChHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence 58999999999998765433 34556778899999999999999999999999999999999999999999999999988
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEcccccc-CchhHHHHHHHHHHHHHCCCeE
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TEPCKSAHIAAAKAAKDAGVVL 220 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~l~~a~~~g~~v 220 (381)
.++.+|+.+++.++.+|+|++.+++...+...++.++++...+++++++|++++.+. .+.+.+.+.++++.+++.++++
T Consensus 80 ~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T cd01166 80 DPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADHLHLSGITLALSESAREALLEALEAAKARGVTV 159 (294)
T ss_pred eCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCEEEEcCcchhhCHHHHHHHHHHHHHHHHcCCEE
Confidence 888899999999988899998887655555566777766667889999999986532 2222477888999999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC-ChHHHHHHHHhcCCCEEEEEecCCceEEEeCC
Q 016868 221 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299 (381)
Q Consensus 221 ~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 299 (381)
++||+.+..+|. .+...+.+..+++++|++++|+.|++.+++.... +..+.++.+ +.|++.|+||+|++|+++++++
T Consensus 160 ~~D~~~~~~~~~-~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~l-~~g~~~viit~G~~G~~~~~~~ 237 (294)
T cd01166 160 SFDLNYRPKLWS-AEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALAL-ALGVKAVVVKLGAEGALVYTGG 237 (294)
T ss_pred EECCCCcchhcC-hHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchhHHHHHHhh-cCCccEEEEEEcCCceEEEECC
Confidence 999986654442 2344566778899999999999999999987542 112333444 5899999999999999999988
Q ss_pred ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 300 ~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 238 ~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 238 GRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRPGD 293 (294)
T ss_pred ceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCC
Confidence 88899999999999999999999999999999999 999999999999999999985
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-45 Score=338.97 Aligned_cols=283 Identities=24% Similarity=0.339 Sum_probs=236.5
Q ss_pred cEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+|||++++|++..++..|.. ....+...+|| +.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 1 ~i~~iG~~~~D~i~~~~~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 79 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGG-GFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGIEIL 79 (289)
T ss_pred CeEEEcceeEEEEeecccCCCCCCccccceeeeccCc-HHHHHHHHHHcCCCeEEEEEecCChHHHHHHHHHHHcCCccc
Confidence 5899999999999888866543 24567899999 999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCch-hHHHHHHHHHHHHHC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP-CKSAHIAAAKAAKDA 216 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~ 216 (381)
++... +..|+.++++++++|+|++..++. .+..++++.++...+.+++++|++++.+.... ....+.++++.++ .
T Consensus 80 ~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 155 (289)
T cd01944 80 LPPRG-GDDGGCLVALVEPDGERSFISISG--AEQDWSTEWFATLTVAPYDYVYLSGYTLASENASKVILLEWLEALP-A 155 (289)
T ss_pred ccccc-CCCCeEEEEEEcCCCceEEEEeCC--ccCCCCHHHhccccCCCCCEEEEeCccccCcchhHHHHHHHHHhcc-C
Confidence 88775 568888888888899999887643 44445666655445778999999987553332 4556666666644 5
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
+.++++|++++...|. .+.+.++++++|++++|++|++.|++...++....++.+.+.+++.|+||+|++|++++
T Consensus 156 ~~~v~~D~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~vvvt~G~~Ga~~~ 230 (289)
T cd01944 156 GTTLVFDPGPRISDIP-----DTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIYAKTAAPVVVRLGSNGAWIR 230 (289)
T ss_pred CCEEEEcCcccccccC-----HHHHHHHHhcCCEEccCHHHHHHHhCCCCcchHHHHHHHHhccCCeEEEEECCCcEEEE
Confidence 7899999987765543 34577888999999999999999999765544444677888899999999999999999
Q ss_pred eC-CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 297 TK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 297 ~~-~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
.+ ++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|
T Consensus 231 ~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-------~~~a~~~a~a~aa~~~~~~G 289 (289)
T cd01944 231 LPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIVVTRSG 289 (289)
T ss_pred ecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCC
Confidence 84 566788989999999999999999999999999999 99999999999999999876
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=339.00 Aligned_cols=283 Identities=34% Similarity=0.469 Sum_probs=243.3
Q ss_pred cEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+|+|++++|++...++.|.. ....+..++||++.|+|.+|++||.++.++|.+|+|.+|+++++.|+++||+++
T Consensus 1 ~il~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 80 (292)
T cd01174 1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80 (292)
T ss_pred CEEEEeeceeEEEEEecCCCCCCCcEEeccceecCCCcHHHHHHHHHHcCCceEEEEEEcCCccHHHHHHHHHHcCCCce
Confidence 5999999999999887765544 234567899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++...++.+|+.++++++.+|+|++..+. ++...++++.++. +.+++++++++++ +.+.+.+..+++.+++
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~~a~~ 153 (292)
T cd01174 81 YVEVVVGAPTGTAVITVDESGENRIVVVP--GANGELTPADVDAALELIAAADVLLLQL-----EIPLETVLAALRAARR 153 (292)
T ss_pred EEEEcCCCCceeEEEEEcCCCceEEEEeC--CCCCCCCHHHHHHHHHhcccCCEEEEeC-----CCCHHHHHHHHHHHHh
Confidence 99888888999999999988999988763 4444556655543 5678999998864 2345677888999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCc
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
+|+++++|+..... ...++++++|++++|++|++.+++....+. .++++.+.+.|++.|+||+|++|
T Consensus 154 ~g~~v~~D~~~~~~----------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 223 (292)
T cd01174 154 AGVTVILNPAPARP----------LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKG 223 (292)
T ss_pred cCCEEEEeCCCcCc----------CcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 99999999974322 124678899999999999999998765543 34567888899999999999999
Q ss_pred eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 293 ~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
++++++++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+..++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~ 292 (292)
T cd01174 224 ALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAAALSVTRPGAQPSIPT 292 (292)
T ss_pred eEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCCCCCCC
Confidence 999998888899999999999999999999999999999999 999999999999999999999988774
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-45 Score=340.21 Aligned_cols=298 Identities=22% Similarity=0.249 Sum_probs=243.3
Q ss_pred CCCCcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.++++|+|+|++++|++...+..+.. .+......+||++.|+|.+|++||.++.++|.||+|.+|+++++.|++.||
T Consensus 2 ~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~ig~vG~D~~g~~i~~~l~~~gV 81 (313)
T PRK09850 2 REKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGV 81 (313)
T ss_pred CCCCcEEEECcEEEeeeccCCCcCcCCCCCceEEEEeCCcHHHHHHHHHHHcCCCeEEEEEecCchhHHHHHHHHHHcCC
Confidence 45579999999999999765432221 234467889999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+++++...++.+|++++++++++|++.+.+. .+++...++.+.+. .+.+++++++++++. .+.+....+++.
T Consensus 82 d~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~ 155 (313)
T PRK09850 82 YVDKCLIVPGENTSSYLSLLDNTGEMLVAIN-DMNISNAITAEYLAQHREFIQRAKVIVADCN-----ISEEALAWILDN 155 (313)
T ss_pred CchheeecCCCCceEEEEEecCCCCEEEEec-CchHhhhCCHHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHHHHh
Confidence 9999888888889999999999999988764 23444445554443 245788999987642 234555555554
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---hHHHHHHHHhcCCCEEEEEec
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt~G 289 (381)
+ .++++++||+.. |. ...+.++++++|++++|++|++.|++....+ .+++++.+.+.|++.||||+|
T Consensus 156 ~--~g~~v~~D~~~~---~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G 225 (313)
T PRK09850 156 A--ANVPVFVDPVSA---WK-----CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMG 225 (313)
T ss_pred c--cCCCEEEEcCCH---HH-----HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3 588999999631 21 1345677889999999999999999864332 245667787899999999999
Q ss_pred CCceEEEeCC-ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 290 PDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 290 ~~G~~~~~~~-~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
++|++++.++ +..++|++++++||||||||+|+|||++++++|++ +++|+++|+++|++++++.+.....|+
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-------~~eal~~a~a~aa~~~~~~~~~~~~~~ 298 (313)
T PRK09850 226 GDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-------FAESVRFAQGCSSMALSCEYTNNPDLS 298 (313)
T ss_pred CceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCcccC
Confidence 9999999854 55678888899999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhC
Q 016868 369 REAVLNAIHA 378 (381)
Q Consensus 369 ~~~v~~~l~~ 378 (381)
+++|++++++
T Consensus 299 ~~~~~~~~~~ 308 (313)
T PRK09850 299 IANVISLVEN 308 (313)
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
|
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=347.96 Aligned_cols=314 Identities=19% Similarity=0.192 Sum_probs=250.0
Q ss_pred cCCCCcccccccccCCCCCCCCccCCCCCcEEEEccceeecccCCC-CCCcc--CCCCccccCCChHHHHHHHHHHcCCc
Q 016868 33 SSPLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVS-GLSLA--ESPAFKKAPGGAPANVAVGIARLGGS 109 (381)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlviG~~~iD~~~~~~-~~~~~--~~~~~~~~~GG~~~NvA~~la~LG~~ 109 (381)
.++.+++.|++++|. +.+. ..|+|+|++++|++..++ ..|.. .+..+...+||++.|+|++++|||.+
T Consensus 39 ~~L~~~g~i~~~~~~---l~~~------~~v~viG~~~vD~~~~~~~~~p~~~~~~~~~~~~~GG~~~NvA~~larLG~~ 109 (362)
T PRK09954 39 MDLMRKGRIKGKGYI---LTEQ------EYCVVVGAINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHNLALLGRD 109 (362)
T ss_pred HHHHHCCCcCCcEEE---EcCC------ccEEEEEEEEEEEEEeeCCcCcCCCCCCceEEEecCcHHHHHHHHHHHcCCC
Confidence 346788999999998 5444 489999999999987765 33332 34567888999999999999999999
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCc
Q 016868 110 SAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKA 187 (381)
Q Consensus 110 v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~ 187 (381)
+.++|.||+|.+|+++++.|++.||+++++...++.+|+.++++.++++++.+ ...++.....++++.+.. +.+..+
T Consensus 110 v~~ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (362)
T PRK09954 110 VHLLSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQDETVL-AINDTHILQQLTPQLLNGSRDLIRHA 188 (362)
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCCCEEE-EEcCchhhhcCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999998888889999888876655544 433444444566654442 446778
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC
Q 016868 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 267 (381)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~ 267 (381)
+++++++- .+.+....+++.+ +++++++|+... .....+.++++++|++++|++|++.+++....
T Consensus 189 ~~v~~~~~-----~~~~~~~~~~~~a--~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~ 253 (362)
T PRK09954 189 GVVLADCN-----LTAEALEWVFTLA--DEIPVFVDTVSE--------FKAGKIKHWLAHIHTLKPTQPELEILWGQAIT 253 (362)
T ss_pred CEEEEECC-----CCHHHHHHHHHhC--CCCcEEEECCCH--------HHhhhhhhhhccccEEecCHHHHHHHcCCCCC
Confidence 88877642 2344555555554 478999998631 11234567899999999999999999987543
Q ss_pred C---hHHHHHHHHhcCCCEEEEEecCCceEEEeCC-ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHH
Q 016868 268 Y---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 343 (381)
Q Consensus 268 ~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~ 343 (381)
+ .+++++.+.+.|++.||||+|++|++++..+ +.+++|++++++||||||||+|+|||++++++|++ ++
T Consensus 254 ~~~~~~~~~~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Ag~l~~l~~g~~-------~~ 326 (362)
T PRK09954 254 SDADRNAAVNALHQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYS-------FR 326 (362)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCccEEEEeCCCceEeccCCCcccccccchHHHHHHHHHHHHHcCCC-------HH
Confidence 2 2356678888999999999999999988755 46678888999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 344 DALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 344 ~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+|+++|+++|++++.+..+..+-.+.+.++++++.
T Consensus 327 eal~~a~a~Aal~~~s~~~~~~~~~~~~~~~~~~~ 361 (362)
T PRK09954 327 DSARFAMACAAISRASGSLNNPTLSADNALSLVPM 361 (362)
T ss_pred HHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHhcc
Confidence 99999999999997766666566799999888753
|
|
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=339.70 Aligned_cols=290 Identities=21% Similarity=0.260 Sum_probs=237.6
Q ss_pred CCCCcEEEEccceeecccCCCC-----C-CccC------------------CCCccccCCChHHHHHHHHHHcC---C-c
Q 016868 58 RESPLVVCFGEMLIDFVPTVSG-----L-SLAE------------------SPAFKKAPGGAPANVAVGIARLG---G-S 109 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~-----~-~~~~------------------~~~~~~~~GG~~~NvA~~la~LG---~-~ 109 (381)
+..++|+|+|++++|++..++. . |... ...+...+||++.|+|+++++|| . +
T Consensus 3 ~~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~ 82 (345)
T PTZ00247 3 SAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGF 82 (345)
T ss_pred CCCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCc
Confidence 3457899999999999988774 1 2210 12347889999999999999885 5 9
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcC
Q 016868 110 SAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLIT 185 (381)
Q Consensus 110 v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~ 185 (381)
|.++|.||+|.+|+++++.|+++||+++++. .++.+|+++++++++ |+|+++.+ .+++..+++++++. +.++
T Consensus 83 v~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~-~~~~~Tg~~~i~v~~-~~r~~~~~--~ga~~~l~~~~i~~~~~~~~l~ 158 (345)
T PTZ00247 83 VCYVGCVGDDRFAEILKEAAEKDGVEMLFEY-TTKAPTGTCAVLVCG-KERSLVAN--LGAANHLSAEHMQSHAVQEAIK 158 (345)
T ss_pred EEEEEEeccchhHHHHHHHHHHcCCeeeccc-cCCCCcEEEEEEEcC-CCcccccC--cchhhcCChHHcCcHHHHHHHh
Confidence 9999999999999999999999999998875 567799999998874 78888765 45666788777764 3688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 265 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~ 265 (381)
+++++|++++.+. .+.+....+++.++++|+++++|++... + ....++.+.++++++|++++|++|++.|++..
T Consensus 159 ~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~~--~--~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~ 232 (345)
T PTZ00247 159 TAQLYYLEGFFLT--VSPNNVLQVAKHARESGKLFCLNLSAPF--I--SQFFFERLLQVLPYVDILFGNEEEAKTFAKAM 232 (345)
T ss_pred hCCEEEEEEEEec--ccHHHHHHHHHHHHHcCCEEEEECCcHH--H--HHHHHHHHHHHHhhCCEEEeCHHHHHHHhhcc
Confidence 9999999986432 2457888999999999999999985311 1 12234557789999999999999999999832
Q ss_pred ---CCChHHHHHHHHh------cCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCC
Q 016868 266 ---DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 266 ---~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
..+.+++++.+.+ .+.+.||||+|++|++++++++.+++|++++ ++||||||||+|+|||+++|++|+
T Consensus 233 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~ 312 (345)
T PTZ00247 233 KWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGK 312 (345)
T ss_pred CCCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCC
Confidence 1234566666653 2578999999999999999988888999887 599999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 334 SLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+ +++|+++|+++|++++++.|+..
T Consensus 313 ~-------~~~al~~a~~aAa~~v~~~Ga~~ 336 (345)
T PTZ00247 313 D-------IDRCVEAGHYSAQVIIQHNGCTY 336 (345)
T ss_pred C-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 9 99999999999999999999873
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-44 Score=328.91 Aligned_cols=279 Identities=28% Similarity=0.369 Sum_probs=235.7
Q ss_pred cEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+|+|++++|++..++..|.. +...+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 1 ~i~~iG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vG~D~~g~~i~~~l~~~gI~~~ 80 (284)
T cd01945 1 RVLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTS 80 (284)
T ss_pred CEEEECcceeEEEEEeccCCCCCCeEEEeEEEEecCCHHHHHHHHHHHcCCCeEEEEEecCchHHHHHHHHHHHcCCCcc
Confidence 5899999999999887766553 345678899999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++...++.+|+++++ .+.+|++++..+.. ....+..++++...+++++++|+++.. ++...++++.+++.|
T Consensus 81 ~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~i~~~~------~~~~~~~~~~~~~~g 151 (284)
T cd01945 81 FIVVAPGARSPISSI-TDITGDRATISITA--IDTQAAPDSLPDAILGGADAVLVDGRQ------PEAALHLAQEARARG 151 (284)
T ss_pred ceeecCCCCCccEEE-EccCCCceEEEecC--CCCCCCcccCCHHHhCcCCEEEEcCCC------HHHHHHHHHHHHHcC
Confidence 999888888998876 44567776665532 333455666666668999999998752 245678899999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
.++++|+..... .+ +.++++++|++++|++|++.+++... .++++.+.+.+++.||||+|++|+++++
T Consensus 152 ~~v~~~~~~~~~--------~~-~~~~~~~~dil~~n~~e~~~l~~~~~---~~~~~~l~~~~~~~vivt~G~~G~~~~~ 219 (284)
T cd01945 152 IPIPLDLDGGGL--------RV-LEELLPLADHAICSENFLRPNTGSAD---DEALELLASLGIPFVAVTLGEAGCLWLE 219 (284)
T ss_pred CCeeEeccCCcc--------cc-hHHHhccCCEEEeChhHHhhhcCCCH---HHHHHHHHhcCCcEEEEEECCCCeEEEc
Confidence 987777653221 12 56788999999999999999988643 2567778889999999999999999998
Q ss_pred -CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 298 -KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 298 -~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+..++|+
T Consensus 220 ~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~ 284 (284)
T cd01945 220 RDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASAAAALKCRGLGGRAGLPT 284 (284)
T ss_pred CCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcccCCC
Confidence 6678899999999999999999999999999999999 999999999999999999999887774
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=334.79 Aligned_cols=290 Identities=40% Similarity=0.552 Sum_probs=245.9
Q ss_pred CcEEEEccceeecccCCCCC---CccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGL---SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~---~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
.+|+|+|++++|++...+.. .. +.......+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++
T Consensus 2 ~~v~~iG~~~iD~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~LG~~v~~i~~vG~D~~g~~i~~~l~~~gv~~~ 80 (301)
T PF00294_consen 2 KKVLVIGEVNIDIIGYVDRFKGDLV-RVSSVKRSPGGAGANVAIALARLGADVALIGKVGDDFFGEIILEELKERGVDTS 80 (301)
T ss_dssp EEEEEESEEEEEEEEESSSHTTSEE-EESEEEEEEESHHHHHHHHHHHTTSEEEEEEEEESSHHHHHHHHHHHHTTEEET
T ss_pred CcEEEECccceEEEeecCCcCCcce-ecceEEEecCcHHHHHHHHHHhccCcceEEeeccCcchhhhhhhcccccccccc
Confidence 58999999999999887652 22 456778999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+.+++.++++|+|++..+ ......++.+++....+.+++++++++..+..+.+.+....+.+.+++.+
T Consensus 81 ~i~~~~~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (301)
T PF00294_consen 81 YIPRDGDEPTGRCLIIVDPDGERTFVFS--PGANSDLTPDELDEEAIDEADILHLSGVSLPEGIPEDLLEALAKAAKKNG 158 (301)
T ss_dssp TEEEESSSEEEEEEEEEETTSEEEEEEE--EGGGGGGGHHHHHHHHHHTESEEEEESGHCSTTSHHHHHHHHHHHHHHTT
T ss_pred ccccccccccceeEeeecccccceeeec--cccccccccccccccccccccceeecccccccccccceeeeccccccccc
Confidence 9998888899999999999999999876 34444456655566788899999999833444555667777777777777
Q ss_pred --CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHH---HHHhcCCCEEEEEecCCc
Q 016868 218 --VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 218 --~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~---~l~~~g~~~vvvt~G~~G 292 (381)
.+++.++. | ...++.+.++++++|++++|++|++.+++....+.+++.+ .++..+++.++||+|++|
T Consensus 159 ~~~~~~~~~~-----~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vivt~G~~G 230 (301)
T PF00294_consen 159 PFDPVFRDPS-----W---DDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAALRELQARGVKIVIVTLGEDG 230 (301)
T ss_dssp EEEEEEEGGG-----S---HHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHHHHHHHHTTSSEEEEEEGGGE
T ss_pred cccccccccc-----c---cccchhhhhhccccchhccccccccccccccccchhhhhccccccchhhhhhhhccccccC
Confidence 34555543 2 1257788888999999999999999999998655565554 445589999999999999
Q ss_pred eEEEeCCceEEEcc-ccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 293 CRYYTKDFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 293 ~~~~~~~~~~~~~~-~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
++++++++.+++++ ++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|+..++||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~l~~~~~-------~~~a~~~a~~~aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 231 ALYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYGLLSGMS-------LEEALKFANAAAALKVQQPGPRSPLPT 300 (301)
T ss_dssp EEEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHHHHTTHH-------HHHHHHHHHHHHHHHHTSSSSSGGTT-
T ss_pred cccccccccccccccccccccceeccchhhhHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCcCCCCC
Confidence 99999888889988 5689999999999999999999999998 999999999999999999999988886
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=332.76 Aligned_cols=297 Identities=26% Similarity=0.301 Sum_probs=237.8
Q ss_pred CCcEEEEc-cceeecccCCCCCCc-------c--------------------------CCCCccccCCChHHHHHHHHHH
Q 016868 60 SPLVVCFG-EMLIDFVPTVSGLSL-------A--------------------------ESPAFKKAPGGAPANVAVGIAR 105 (381)
Q Consensus 60 ~~~vlviG-~~~iD~~~~~~~~~~-------~--------------------------~~~~~~~~~GG~~~NvA~~la~ 105 (381)
+++|++|| +.++|+...++..-+ . +....+..+||++.|++++|++
T Consensus 19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~ 98 (367)
T PLN02379 19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLSA 98 (367)
T ss_pred CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHHH
Confidence 36899999 999999977652211 0 0112567799999999999996
Q ss_pred -cCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhc
Q 016868 106 -LGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLI 184 (381)
Q Consensus 106 -LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i 184 (381)
||.++.++|+||+|.+|+++++.|++.||++++++.. +.+|+.++++++++|+|++..+ .+....++.+++..+.+
T Consensus 99 ~LG~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~-~~~Tg~~~v~v~~dgert~~~~--lg~~~~l~~~~~~~~~~ 175 (367)
T PLN02379 99 GFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAK-KGPTAQCVCLVDALGNRTMRPC--LSSAVKLQADELTKEDF 175 (367)
T ss_pred hcCCCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccC-CCCCceEEEEECCCCCccccCC--ccccccCChhHCCHHHH
Confidence 9999999999999999999999999999999888654 4589999999999999987654 34455677777777788
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhcc
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLT 262 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~ 262 (381)
++++++|++ +.. .+.+.+.++++.++++|+++++|++.... ....++.+.++++ ++|++++|++|++.++
T Consensus 176 ~~~~~v~v~-~~~---~~~~~~~~~~~~A~~~g~~v~lD~s~~~~----v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~ 247 (367)
T PLN02379 176 KGSKWLVLR-YGF---YNLEVIEAAIRLAKQEGLSVSLDLASFEM----VRNFRSPLLQLLESGKIDLCFANEDEARELL 247 (367)
T ss_pred hcCCEEEEE-ccc---CCHHHHHHHHHHHHHcCCEEEEeccchhh----hhhhhHHHHHHhhcCCccEEEcCHHHHHHHh
Confidence 999999998 432 23578889999999999999999963211 1233455556664 8999999999999999
Q ss_pred CCCC-CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCCccccchH
Q 016868 263 QGED-PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKED 340 (381)
Q Consensus 263 ~~~~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~ 340 (381)
+... .+.+++. .+++.+++.++||+|++|++++.+++.+++|+++ +++||||||||+|+|||+|++++|++
T Consensus 248 ~~~~~~~~~~~~-~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFaagfl~gl~~G~~------ 320 (367)
T PLN02379 248 RGEQESDPEAAL-EFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFASGFLYGLIKGLS------ 320 (367)
T ss_pred cCCCCCCHHHHH-HHHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHHHHHHHHHHCCCC------
Confidence 7532 2233444 4556789999999999999999988888999987 47999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 341 QLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 341 ~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++|+++|+++|+.+|++.|+.......+++.+.
T Consensus 321 -l~~a~~~g~~aAa~vi~~~G~~~~~~~~~~~~~~ 354 (367)
T PLN02379 321 -LEECCKVGACSGGSVVRALGGEVTPENWQWMYKQ 354 (367)
T ss_pred -HHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHH
Confidence 9999999999999999999987433333334333
|
|
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=323.81 Aligned_cols=270 Identities=29% Similarity=0.432 Sum_probs=228.3
Q ss_pred cEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+|+|++++|++..++..|.. ........+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 1 ~v~~iG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 80 (279)
T cd01942 1 DVAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTS 80 (279)
T ss_pred CEEEEecceeeeEeecccCCCCCceEecceeeecCCcHHHHHHHHHHHcCCCceEEEEecCCcchHHHHHHHHHcCCCcc
Confidence 5899999999999888877653 345678999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++...++.+|+.++++++++|++++... .+....+.+++ ....+++++++|+++.. ...++++.+++.|
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g 149 (279)
T cd01942 81 HVRVVDEDSTGVAFILTDGDDNQIAYFY--PGAMDELEPND-EADPDGLADIVHLSSGP--------GLIELARELAAGG 149 (279)
T ss_pred ceEEcCCCCcceEEEEEcCCCCEEEEec--CCcccccccCC-chhhhcccCEEEeCCch--------HHHHHHHHHHHcC
Confidence 9987777889999999988888887754 34444455544 44667899999998752 3557777888889
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHH---hhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEI---SFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~---~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
+++++|++.+...|. .+.+..+++++|++++|++|+ ..+++.... . ...+++.||||+|++|++
T Consensus 150 ~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~---~-----~~~~~~~vvvt~G~~G~~ 216 (279)
T cd01942 150 ITVSFDPGQELPRLS-----GEELEEILERADILFVNDYEAELLKERTGLSEA---E-----LASGVRVVVVTLGPKGAI 216 (279)
T ss_pred CeEEEcchhhhhhcc-----HHHHHHHHhhCCEEecCHHHHHHHHhhcCCChH---H-----HhcCCCEEEEEECCCceE
Confidence 999999986554332 245677889999999999999 555554321 1 127899999999999999
Q ss_pred EEeCCceEEEccc-cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 295 YYTKDFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 295 ~~~~~~~~~~~~~-~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
++.+++.+++|++ +++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------l~~al~~a~~~Aa~~~~~~G~ 278 (279)
T cd01942 217 VFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAASLKVERRGA 278 (279)
T ss_pred EEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCC
Confidence 9998888899987 889999999999999999999999999 999999999999999999986
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=319.61 Aligned_cols=284 Identities=33% Similarity=0.429 Sum_probs=241.6
Q ss_pred ccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeec
Q 016868 67 GEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFD 142 (381)
Q Consensus 67 G~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~ 142 (381)
|++++|++..+++.|.. ....+..++||++.|+|++|++||.++.+++.+|+|.+|+++++.|++.||+++++...
T Consensus 1 G~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~ 80 (293)
T TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80 (293)
T ss_pred CCceEeEEEEeCCCCCCCCcEecCCceecCCCcHHHHHHHHHHCCCCEEEEEEecCCccHHHHHHHHHHcCCCeeEEEEc
Confidence 78999999888876654 34456899999999999999999999999999999999999999999999999999888
Q ss_pred CCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeE
Q 016868 143 PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 220 (381)
Q Consensus 143 ~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v 220 (381)
++.+|++++++++++|++++..+ .+.+..+.++++. .+.+..++++++.+ +.+.+.+.++++.++++++++
T Consensus 81 ~~~~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v 153 (293)
T TIGR02152 81 KDTPTGTAFITVDDTGENRIVVV--AGANAELTPEDIDAAEALIAESDIVLLQL-----EIPLETVLEAAKIAKKHGVKV 153 (293)
T ss_pred CCCCCceEEEEEcCCCCEEEEEE--CCcCCcCCHHHHHHHHhhhccCCEEEEec-----CCCHHHHHHHHHHHHHcCCEE
Confidence 88899999999998899988776 3444556666665 34678899987653 334567788999999999999
Q ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC---ChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 221 SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP---YDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 221 ~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
++|++.... ....++++++|++++|++|++.+++.... +..++++.+.++|++.|+||+|++|+++++
T Consensus 154 ~~D~~~~~~---------~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~~~~ 224 (293)
T TIGR02152 154 ILNPAPAIK---------DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVS 224 (293)
T ss_pred EEECCcCcc---------cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHHHcCCCeEEEEeCCCceEEEe
Confidence 999964311 11246788999999999999999987533 234566788888999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+...+|+.++++
T Consensus 225 ~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~~~G~~~~~~~~~~~~ 293 (293)
T TIGR02152 225 KDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293 (293)
T ss_pred CCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCcccCCCChHHcC
Confidence 8888899999999999999999999999999999999 99999999999999999999987788888763
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=312.65 Aligned_cols=261 Identities=23% Similarity=0.334 Sum_probs=219.4
Q ss_pred cEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+|+|++++|++..+++.|... ...+...+||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++ ++++.
T Consensus 1 ~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~vG~D~~g~~i~~~l~~-~~~~~ 79 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELES-GGDKH 79 (265)
T ss_pred CEEEEeeeeEEEEEEecCCCCCCceeecccceeecCchHHHHHHHHHHcCCceEEEEEecCChHHHHHHHHHHh-cCCcc
Confidence 58999999999998887765542 45678999999999999999999999999999999999999999999 99988
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
.++.. +..|+.++++++++|+|++....... .+++..+.+++++++|+++.. ...++++.+++.+
T Consensus 80 ~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~a~~~~ 144 (265)
T cd01947 80 TVAWR-DKPTRKTLSFIDPNGERTITVPGERL------EDDLKWPILDEGDGVFITAAA--------VDKEAIRKCRETK 144 (265)
T ss_pred eEEec-CCCCceEEEEECCCCcceEEecCCCC------cccCCHhHhccCCEEEEeccc--------ccHHHHHHHHHhC
Confidence 87754 45899999999989999887642211 234444567889999998753 1235566777765
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
.+++|++.+.. .+.+.++++++|++++|++|+..+++ .+.+.+.+++.||||+|++|+++++
T Consensus 145 -~~~~d~~~~~~--------~~~~~~~~~~~d~~~~n~~e~~~l~~---------~~~~~~~~~~~viit~G~~Ga~~~~ 206 (265)
T cd01947 145 -LVILQVTPRVR--------VDELNQALIPLDILIGSRLDPGELVV---------AEKIAGPFPRYLIVTEGELGAILYP 206 (265)
T ss_pred -CeEeccCcccc--------chhHHHHhhhCCEEEeCHHHHHHhhh---------HHHHHhccCCEEEEEeCCCCeEEEE
Confidence 57788875433 12456788999999999999998864 4466678999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+++.+++++++++++|||||||+|.|||++++++|++ +++|+++|+++|+.++++.|++
T Consensus 207 ~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~v~~~G~~ 265 (265)
T cd01947 207 GGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVSHFGPY 265 (265)
T ss_pred CCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCC
Confidence 8888899999999999999999999999999999999 9999999999999999999963
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=319.05 Aligned_cols=292 Identities=24% Similarity=0.257 Sum_probs=229.9
Q ss_pred CCCcEEEEccceeecccC--CCCCCcc------CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHH
Q 016868 59 ESPLVVCFGEMLIDFVPT--VSGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~--~~~~~~~------~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~ 130 (381)
+.++|+++|++++|++.. ++..+.. ........+|| +.|+|.+|++||.++.++|.||+|.+|+++++.|+
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~ 84 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEREEDRLGG-AANVARNIASLGARVFLVGVVGDDEAGKRLEALLA 84 (315)
T ss_pred CCCcEEEECceeEeeeeeecccccCCCCCCceEEEEEEEecCcH-HHHHHHHHHhcCCceEEEEEEecchhHHHHHHHHH
Confidence 357899999999999865 3332111 12345677999 79999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCCh----hccc--hhhcCCccEEEEccccccCchhHH
Q 016868 131 ENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE----AELD--LSLITKAKIFHYGSISLITEPCKS 204 (381)
Q Consensus 131 ~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~l~--~~~i~~~~~~~~~~~~~~~~~~~~ 204 (381)
++||+++++...++.+|+.+++++++++.... .. ......++. +.+. .+.++++|+++++++. ....+.+
T Consensus 85 ~~gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~~~~ 160 (315)
T TIGR02198 85 EEGIDTSGLIRDKDRPTTTKTRVLARNQQLLR-VD--FEERDPINAELEARLLAAIREQLASADAVVLSDYA-KGVLTPR 160 (315)
T ss_pred HCCCCcceEEECCCCCcceEEEEEcCCeEEEE-ec--CCCCCCCCHHHHHHHHHHHHhhhhhCCEEEEecCC-CCccCHH
Confidence 99999999988888899999988876433222 21 111111221 1111 2457899999998753 2334567
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC--ChHHHHHHHH-hcCC
Q 016868 205 AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--YDDAVVYKLF-HANL 281 (381)
Q Consensus 205 ~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--~~~~~~~~l~-~~g~ 281 (381)
....+++.+++.|+++++||+.+. | ..++++|++++|++|++.+++.... +..++++.++ +.|+
T Consensus 161 ~~~~~~~~a~~~g~~v~~D~~~~~--~-----------~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~l~~~~g~ 227 (315)
T TIGR02198 161 VVQEVIAAARKHGKPVLVDPKGKD--F-----------SRYRGATLITPNRKEAEAAVGACDTEAELVQAAEKLLEELDL 227 (315)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcc--h-----------hhcCCCcEECCCHHHHHHHhCCCCCHHHHHHHHHHHHHHcCC
Confidence 788899999999999999997431 1 2467899999999999999984221 1234445555 4789
Q ss_pred CEEEEEecCCceEEEeC-CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 282 KLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 282 ~~vvvt~G~~G~~~~~~-~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+.||||+|++|++++++ ++.+++|+++++++||+||||+|.|||++++++|++ +++|+++|+++|++++++.
T Consensus 228 ~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~-------~~~al~~A~~~aa~~~~~~ 300 (315)
T TIGR02198 228 EALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS-------LEEACRLANAAAGVVVGKL 300 (315)
T ss_pred CEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhhhhhccC
Confidence 99999999999999884 567889999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHh
Q 016868 361 GAIPALPTREAVLNAIH 377 (381)
Q Consensus 361 G~~~~~~~~~~v~~~l~ 377 (381)
|+.. ++++++++.|+
T Consensus 301 G~~~--~~~~~~~~~~~ 315 (315)
T TIGR02198 301 GTAT--VSPAELANALQ 315 (315)
T ss_pred CCCC--CCHHHHHHHhC
Confidence 9874 79999988764
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=308.82 Aligned_cols=263 Identities=30% Similarity=0.364 Sum_probs=217.0
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|+|+|++++|++... ...++||++.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++++..
T Consensus 1 ~v~~iG~~~~D~~~~~----------~~~~~GG~~~Nva~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gI~~~~v~~ 70 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------GKMYPGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRV 70 (264)
T ss_pred CeEEEcceEEEEeccC----------ceecCCCcHHHHHHHHHHcCCCeeEEecccCchhHHHHHHHHHHcCCChhheEE
Confidence 5899999999999752 356899999999999999999999999999999999999999999999999987
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEE
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 221 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~ 221 (381)
.++ +|+.+++. .++|+|++..++. +......+.+.....+++++++|++++.. .+...++++.+++.+++|+
T Consensus 71 ~~~-~t~~~~~~-~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~a~~~g~~v~ 142 (264)
T cd01940 71 KEG-ENAVADVE-LVDGDRIFGLSNK-GGVAREHPFEADLEYLSQFDLVHTGIYSH-----EGHLEKALQALVGAGALIS 142 (264)
T ss_pred cCC-CCceEEEE-ecCCceEEEeecC-CcHHhcccCcccHhHHhcCCEEEEccccc-----HHHHHHHHHHHHHcCCEEE
Confidence 654 78887754 4678888876532 22222222223335678999999987532 4567788999999999999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCCce
Q 016868 222 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301 (381)
Q Consensus 222 ~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 301 (381)
+|++.+ |. .+.+..+++++|++++|++|... .+..++++.+++.+++.||||+|++|++++.+++.
T Consensus 143 ~D~~~~---~~-----~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~l~~~~~~~vvvT~G~~G~~~~~~~~~ 208 (264)
T cd01940 143 FDFSDR---WD-----DDYLQLVCPYVDFAFFSASDLSD------EEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAVF 208 (264)
T ss_pred EcCccc---CC-----HHHHHhhcccCCEEEechhhcCc------chHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCeE
Confidence 999864 21 12356778999999999887531 22345677788899999999999999999998888
Q ss_pred EEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 302 ~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+++|+++++++|||||||+|+|||++++++|++ ++++|+++|+++|++++++.|+
T Consensus 209 ~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~------~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 209 YSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGT------AIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred EecCCcCCCCCCCCCchHHHHHHHHHHHHhCCc------hHHHHHHHHHHHHHHHhcccCC
Confidence 899999999999999999999999999999974 2899999999999999999986
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=312.64 Aligned_cols=287 Identities=22% Similarity=0.255 Sum_probs=234.2
Q ss_pred EEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 65 CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 65 viG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
|.=++++|++..+++.|.. ...+...++||++.|+|.+|++||.++.++|.||+| +|+++++.|++.||+++++..
T Consensus 4 ~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~v~~is~vG~D-~g~~~~~~L~~~gId~~~~~~ 82 (304)
T TIGR03828 4 VTLNPAIDLTIELDGLTLGEVNRVESTRIDAGGKGINVSRVLKNLGVDVVALGFLGGF-TGDFIEALLREEGIKTDFVRV 82 (304)
T ss_pred EEcchHHeEEEEccccccCceeecccccccCCccHHHHHHHHHHcCCCeEEEEEecCc-hhHHHHHHHHHCCCcceEEEC
Confidence 3347889999888887732 345678999999999999999999999999999999 699999999999999998877
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
.+ .|++++++++.+|+++++.+. +. .+++++++. +.+++++++|++++.. ...+.+.+..+++.+++
T Consensus 83 ~~--~t~~~~~~~~~~g~~~~~~~~--~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~-~~~~~~~~~~~~~~~~~ 155 (304)
T TIGR03828 83 PG--ETRINVKIKEPSGTETKLNGP--GP--EISEEELEALLEKLRAQLAEGDWLVLSGSLP-PGVPPDFYAELIALARE 155 (304)
T ss_pred CC--CCeeeEEEEeCCCCEEEEECC--CC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCC-CCCCHHHHHHHHHHHHH
Confidence 63 466777777778888776542 22 244443331 3578999999987632 23345677889999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCCc
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~G 292 (381)
.+.++++|++. ...+ ..+...+|++++|+.|++.+++....+.+ ++++.+.+.|++.||||+|++|
T Consensus 156 ~~~~v~~D~~~--------~~~~---~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 224 (304)
T TIGR03828 156 KGAKVILDTSG--------EALR---DGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARELLDLGAENVLISLGADG 224 (304)
T ss_pred cCCEEEEECCh--------HHHH---HHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCC
Confidence 99999999962 1111 12234579999999999999987544333 4556777899999999999999
Q ss_pred eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 016868 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372 (381)
Q Consensus 293 ~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v 372 (381)
++++++++.+++++++++++|||||||+|.|||+++|++|++ +++|+++|+++|++++++.|+. +|+++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-------~~~a~~~a~~~Aa~~~~~~G~~--~p~~~~~ 295 (304)
T TIGR03828 225 ALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-------LEEALRLAVAAGSAAAFSEGTG--LPDPEDI 295 (304)
T ss_pred cEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC--CCCHHHH
Confidence 999998888889998899999999999999999999999999 9999999999999999999974 7999999
Q ss_pred HHHHhCC
Q 016868 373 LNAIHAP 379 (381)
Q Consensus 373 ~~~l~~~ 379 (381)
++++.+|
T Consensus 296 ~~~~~~~ 302 (304)
T TIGR03828 296 EELLPQV 302 (304)
T ss_pred HHHHhcc
Confidence 9998876
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=312.50 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=219.6
Q ss_pred cEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
.|+|+|++++|++..+++.|... .......+||++.|+|.+|++||.++.++|.+|+|++|+++++.|++.||+++
T Consensus 1 ~v~~iG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~lG~~~~~~~~vG~D~~g~~~~~~l~~~gId~~ 80 (290)
T cd01939 1 AVLCVGLTVLDFITTVDKYPFEDSDQRTTNGRWQRGGNASNSCTVLRLLGLSCEFLGVLSRGPVFESLLDDFQSRGIDIS 80 (290)
T ss_pred CEEEEeeeeeEEEeeecCCCCCCcceEeeeeeEecCCCHHHHHHHHHHcCCceEEEEeecCCHHHHHHHHHHHHcCCcee
Confidence 38999999999999988877653 23457789999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++...++..+..++++.+++|+|++.++.. ....++.++++...+++++++|++++.+ +...++++.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~ 152 (290)
T cd01939 81 HCYRKDIDEPASSYIIRSRAGGRTTIVNDN--NLPEVTYDDFSKIDLTQYGWIHFEGRNP------DETLRMMQHIEEHN 152 (290)
T ss_pred eeeEcCCCCCeeEEEEEcCCCCeEEEEeCC--CCCCCCHHHHhhhhhccCCEEEEeccCH------HHHHHHHHHHHHhc
Confidence 987666656666677777788888877633 3445677776655568999999987632 23456666777665
Q ss_pred -------CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHH--HhcCCCEEEEEe
Q 016868 218 -------VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL--FHANLKLLLVTE 288 (381)
Q Consensus 218 -------~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l--~~~g~~~vvvt~ 288 (381)
+++++|+.... +.+.++++++|++++|++|++.+ +... .++.++.+ ...+++.||||+
T Consensus 153 ~~~~~~~~~v~~d~~~~~----------~~~~~~l~~~di~~~n~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~vvvt~ 219 (290)
T cd01939 153 NRRPEIRITISVEVEKPR----------EELLELAAYCDVVFVSKDWAQSR-GYKS--PEECLRGEGPRAKKAALLVCTW 219 (290)
T ss_pred CcCCCcceEEEEEeccCc----------hhhhhHHhhCCEEEEEhHHHHhc-CcCC--HHHHHHhhhhhccCCcEEEEEc
Confidence 68889986321 22347888999999999998865 5432 34444333 245789999999
Q ss_pred cCCceEEEeC-CceEEEccccc-cccCCCCccHHHHHHHHHHHHcCC-ccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 289 GPDGCRYYTK-DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDF-SLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 289 G~~G~~~~~~-~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~-~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
|++|++++.+ ++.+++|+++. ++|||+||||+|+|||++++++|+ + +++|+++|+++|++++++.|.
T Consensus 220 G~~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-------~~~a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 220 GDQGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-------LSEALDFGNRVASQKCTGVGF 289 (290)
T ss_pred ccCCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-------HHHHHHHHHHHHHHHHhhhcC
Confidence 9999999886 45678898774 699999999999999999999999 7 999999999999999999884
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=313.70 Aligned_cols=278 Identities=26% Similarity=0.311 Sum_probs=220.2
Q ss_pred cEEEEccceeecccCC--CCCCcc------CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 62 LVVCFGEMLIDFVPTV--SGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~--~~~~~~------~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
+|+|+|++++|++... +..+.. ........+|| +.|+|.+|++||.++.++|.+|+|.+|+++++.|+++|
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~g 79 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGG-AANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEG 79 (304)
T ss_pred CEEEEcceeEEeeEeeccccccCCCCcceEEeeeEEecCcH-HHHHHHHHHHhCCCeEEEEEEcCCccHHHHHHHHHhCC
Confidence 5899999999998753 333222 12345668999 58999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhc------cchhhcCCccEEEEccccccCchhHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE------LDLSLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
|+++++ ..++.+|+.+++++++ +++.+..+... ...++.+. ...+.++++++++++++. ....+.+...
T Consensus 80 I~~~~~-~~~~~~t~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~v~~s~~~-~~~~~~~~~~ 154 (304)
T cd01172 80 IDTDGI-VDEGRPTTTKTRVIAR-NQQLLRVDRED--DSPLSAEEEQRLIERIAERLPEADVVILSDYG-KGVLTPRVIE 154 (304)
T ss_pred CCcceE-ecCCCCceEEEEEecC-CcEEEEEecCC--CCCCCHHHHHHHHHHHHHhhccCCEEEEEcCC-CCccCHHHHH
Confidence 999984 5566679888888765 45555443221 22233221 112457899999987642 2233456778
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHH-hcCCCE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLF-HANLKL 283 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~-~~g~~~ 283 (381)
.+++.+++.++++++|++.+.. ..++++|++++|++|++.+++....+. +++++.+. ..|++.
T Consensus 155 ~~~~~a~~~~~~v~~D~~~~~~-------------~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~ 221 (304)
T cd01172 155 ALIAAARELGIPVLVDPKGRDY-------------SKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLELLNLEA 221 (304)
T ss_pred HHHHHHHhcCCCEEEeCCCcch-------------hhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCCe
Confidence 8899999999999999974311 356789999999999999998753322 34555565 478999
Q ss_pred EEEEecCCceEEEe-CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 284 LLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 284 vvvt~G~~G~~~~~-~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
||||+|++|+++++ +++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-------~~~al~~a~a~Aa~~~~~~g~ 294 (304)
T cd01172 222 LLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-------LEEAAFLANAAAGVVVGKVGT 294 (304)
T ss_pred EEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhheeeecCCC
Confidence 99999999999998 6778899999999999999999999999999999999 999999999999999999998
Q ss_pred CCC
Q 016868 363 IPA 365 (381)
Q Consensus 363 ~~~ 365 (381)
.+.
T Consensus 295 ~~~ 297 (304)
T cd01172 295 APV 297 (304)
T ss_pred CCc
Confidence 754
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=306.60 Aligned_cols=289 Identities=16% Similarity=0.159 Sum_probs=235.0
Q ss_pred EE-EEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 63 VV-CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 63 vl-viG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
|+ |.=+.++|++..+++.+.. +......++||++.|+|.+|++||.++.++|.+|+|.+|++ ++.|+++||++.+
T Consensus 5 ~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~i~~vG~D~~~~~-~~~l~~~gv~~~~ 83 (312)
T PRK09513 5 VATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGF-QQLFSELGIANRF 83 (312)
T ss_pred EEEEecChHHeEEEEcCceecCCeeeecceeecCCchHHHHHHHHHHcCCCeEEEEEecCccHHHH-HHHHHHcCCCccE
Confidence 55 4459999999888887643 34567899999999999999999999999999999999986 6889999999876
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+ ..++ +|+.++.+++.+|++++.... .. .+++.++. .+.++++|++|++++.. .+...+...++++.
T Consensus 84 ~-~~~~-~t~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~l~~~d~v~~~g~~~-~~~~~~~~~~~~~~ 156 (312)
T PRK09513 84 Q-VVQG-RTRINVKLTEKDGEVTDFNFS--GF--EVTPADWERFVTDSLSWLGQFDMVAVSGSLP-RGVSPEAFTDWMTR 156 (312)
T ss_pred E-ECCC-CCEEEEEEEeCCCcEEEEeCC--CC--CCCHHHHHHHHHHHHhhcCCCCEEEEECCCC-CCCCHHHHHHHHHH
Confidence 6 4444 788888888888888765542 21 23333322 24578999999988643 33455777888999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEec
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G 289 (381)
+++.|.++++|++. ...+ ..+....|++++|++|+..+++....+.+ ++++.+.+.|++.||||+|
T Consensus 157 a~~~g~~v~~D~~~--------~~~~---~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 225 (312)
T PRK09513 157 LRSQCPCIIFDSSR--------EALV---AGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALREQGIAHVVISLG 225 (312)
T ss_pred HHhcCCEEEEECCh--------HHHH---HHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 99999999999962 1122 22345788999999999999987654433 3556777899999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++.+++.+++++++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|. +++++
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-------~~~a~~~A~a~Aa~~~~~~~~--~~~~~ 296 (312)
T PRK09513 226 AEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-------SEHTLRLATAVSALAVSQSNV--GITDR 296 (312)
T ss_pred CCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhCCCC--CCCCH
Confidence 999999888877788888899999999999999999999999999 999999999999999999974 77999
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
+|+++++.+|
T Consensus 297 ~e~~~~l~~~ 306 (312)
T PRK09513 297 PQLAAMMARV 306 (312)
T ss_pred HHHHHHHhce
Confidence 9999998775
|
|
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=302.50 Aligned_cols=258 Identities=26% Similarity=0.310 Sum_probs=211.4
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
++|+++|++++|++.... +.++||.+.|+|.+|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------~~~~GG~~~NvA~~l~~lG~~~~~is~vG~D~~g~~i~~~l~~~gI~~~~~~ 70 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------KAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVH 70 (260)
T ss_pred CeEEEeccceeeecccCC----------ccccCccHHHHHHHHHHcCCcceEEEEecCcHHHHHHHHHHHHcCCcchhee
Confidence 479999999999997642 2589999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCC-CccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNP-SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
+.++ +|+.+++.++ +|+|++..+... .....+++. +.+.+.+++++|++.+. ...++++.+++++++
T Consensus 71 ~~~~-~t~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~~~~~~--------~~~~~~~~~~~~~~~ 138 (260)
T PRK09813 71 TKHG-VTAQTQVELH-DNDRVFGDYTEGVMADFALSEE--DYAWLAQYDIVHAAIWG--------HAEDAFPQLHAAGKL 138 (260)
T ss_pred eecC-CCceEEEEEe-CCcEEeeccCCCcccccccCHH--HHHHHHhCCEEEEeccc--------hHHHHHHHHHHcCCe
Confidence 8665 7888877775 688887654321 222223332 23567889999986431 123567778899999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCC
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 299 (381)
+++|++.+.. .+.+.++++++|+++.|+++. ..+.+++++.+.+.|++.||||+|++|+++++++
T Consensus 139 v~~D~~~~~~--------~~~~~~~~~~~d~~~~~~~~~-------~~~~~~~~~~~~~~g~~~viit~G~~Ga~~~~~~ 203 (260)
T PRK09813 139 TAFDFSDKWD--------SPLWQTLVPHLDYAFASAPQE-------DEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGA 203 (260)
T ss_pred EEEEcCCCcc--------HHHHHHhCCceeEEEecCCcc-------hHHHHHHHHHHHHcCCCEEEEEECCCceEEEECC
Confidence 9999975321 123567889999999886531 1122566777888999999999999999999988
Q ss_pred ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 300 ~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|+
T Consensus 204 ~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-------~~~al~~a~~~aa~~~~~~G~ 259 (260)
T PRK09813 204 QFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-------LPQAMAQGTACAAKTIQYHGA 259 (260)
T ss_pred EEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCC
Confidence 88899999999999999999999999999999999 999999999999999999986
|
|
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=314.51 Aligned_cols=277 Identities=17% Similarity=0.200 Sum_probs=226.9
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHc-CC--ce--EEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL-GG--SS--AFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~L-G~--~v--~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+++++|++++|++...++ ..+...+||++.|+|+++++| |. ++ .+++.+|+| +|+++++.|++.||++
T Consensus 1 ~~~~~G~~~~d~i~~~~~------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~~~~vG~D-~G~~l~~~L~~~GVd~ 73 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------EPVTNVLGGAGTYAILGARLFLPPPLSRSISWIVDKGSD-FPKSVEDELESWGTGM 73 (328)
T ss_pred CccccCcEEeeccccCCC------CccccccCCchhhHhhceeeecCCccccceeeEEecCCC-CCHHHHHHHHhcCCce
Confidence 478999999999987653 345678999999999999999 54 67 889999999 9999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH-
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD- 215 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~- 215 (381)
++ ...++.+|+.++++++++|+|.+.++ .+.+..+++++++...+..++++|+.+... ...+...++++.+++
T Consensus 74 ~~-~~~~~~~Tg~~~v~~~~~g~r~~~~~--~~~~~~~~~~~l~~~~~~~a~~~hl~~~~~---~~~~~~~~~~~~a~~~ 147 (328)
T cd01943 74 VF-RRDPGRLTTRGLNIYDGNDRRFFKYL--TPKKRIDVSDDLNSTPLIRSSCIHLICSPE---RCASIVDDIINLFKLL 147 (328)
T ss_pred EE-EeCCCCcchhhhhhcCCCCcceeeec--CcccccccccccccccccCCCeEEEECCHH---HHHHHHHHHHHHHHhh
Confidence 98 77778899999988888889887765 334466777777766788899999976431 134677788888888
Q ss_pred -----CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHH-----H---HHHhc
Q 016868 216 -----AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV-----Y---KLFHA 279 (381)
Q Consensus 216 -----~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~-----~---~l~~~ 279 (381)
.+.++++|++.... . ...++.+.++++++|++++|++|++.+++....+. ++.. . .+...
T Consensus 148 ~~d~~~g~~~~~d~~~~~~--~--~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (328)
T cd01943 148 KGNSPTRPKIVWEPLPDSC--D--PENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGILQD 223 (328)
T ss_pred ccccCCccEEEEecCCccc--C--hhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccchhhhhhhHHHHHHHhhhcc
Confidence 88899999863211 0 11345678899999999999999999998764321 1111 1 22457
Q ss_pred CCCEEEEEecCCceEEEe--CCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 016868 280 NLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 280 g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
+++.||||+|++|+++++ +++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 224 g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~-------~~~al~~a~a~Aa 296 (328)
T cd01943 224 PGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKS-------IDEACIYGSVAAS 296 (328)
T ss_pred CCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 889999999999999998 456788999988 9999999999999999999999999 9999999999999
Q ss_pred HHhhhcCC
Q 016868 355 LTVMERGA 362 (381)
Q Consensus 355 ~~~~~~G~ 362 (381)
+++++.|.
T Consensus 297 ~~v~~~G~ 304 (328)
T cd01943 297 FAIEQVGL 304 (328)
T ss_pred HHHccCCC
Confidence 99999996
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=306.12 Aligned_cols=289 Identities=22% Similarity=0.226 Sum_probs=230.0
Q ss_pred EEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 63 VVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 63 vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
+.+..++++|.+..+++.+... .......+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++ ||+++++
T Consensus 3 ~~~t~np~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vGd-~~G~~i~~~l~~-gI~~~~~ 80 (309)
T PRK13508 3 LTVTLNPSIDISYPLDELKLDTVNRVVDVSKTAGGKGLNVTRVLSEFGENVLATGLIGG-ELGQFIAEHLDD-QIKHAFY 80 (309)
T ss_pred EEEecChHHeEEEEeCCeeeCCeEEecceeecCCchHHHHHHHHHHcCCCeEEEEEecC-hhHHHHHHHHHc-CCCceEE
Confidence 4566899999998888775542 3457789999999999999999999999999996 689999999999 9999876
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
.. ++ .|+.++++++ +|++++...++ .. +..+... .+.++++|++|+++... ...+.+....+++.+
T Consensus 81 ~~-~~-~t~~~~~~~~-~g~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~a 152 (309)
T PRK13508 81 KI-KG-ETRNCIAILH-EGQQTEILEKG--PE--ISVQEADGFLHHFKQLLESVEVVAISGSLP-AGLPVDYYAQLIELA 152 (309)
T ss_pred EC-CC-CCeeeEEEEe-CCCEEEEECCC--CC--CCHHHHHHHHHHHHHhccCCCEEEEeCCCC-CCcCHHHHHHHHHHH
Confidence 54 33 5677777665 68888776533 22 3332211 24578999999988643 223346677888999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC-ChH---HHHHHHHhcCCCEEEEEec
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD---AVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-~~~---~~~~~l~~~g~~~vvvt~G 289 (381)
++.|+++++|++.. . ...+...+..+|++++|++|++.+++.... +.+ +.++.+...|++.|+||+|
T Consensus 153 ~~~g~~v~~D~~~~--------~-~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~vvvT~G 223 (309)
T PRK13508 153 NQAGKPVVLDCSGA--------A-LQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQQPLFEGIEWIIVSLG 223 (309)
T ss_pred HHCCCEEEEECCcH--------H-HHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 99999999999621 1 122223356899999999999999987532 222 3334555679999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.+.. ..++
T Consensus 224 ~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-------~~~al~~a~a~aa~~~~~~~~~--~~~~ 294 (309)
T PRK13508 224 ADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-------DADLLKKANVLGMLNAQEKQTG--HVNM 294 (309)
T ss_pred CCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCcC--CCCH
Confidence 999999988888889999999999999999999999999999999 9999999999999999999975 4788
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
+++++++++|
T Consensus 295 ~~~~~~~~~i 304 (309)
T PRK13508 295 ANYDELYNQI 304 (309)
T ss_pred HHHHHHHhce
Confidence 9999998876
|
|
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=306.35 Aligned_cols=293 Identities=19% Similarity=0.185 Sum_probs=229.4
Q ss_pred EEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 64 VCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 64 lviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
.|.=++++|.+..+++.+.. ...++..++||++.|+|++|++||.++.++|.+|+| +|+++++.|++.||+++++.
T Consensus 3 ~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~~-~G~~i~~~l~~~GV~~~~~~ 81 (309)
T TIGR01231 3 TVTLNPSVDISYPLTALKLDTVNRVQEVSKTAGGKGLNVTRVLAQVGDPVLASGFLGGK-LGEFIEKELDHSDIKHAFYK 81 (309)
T ss_pred EEEcchHHeEEEEcCCeeeCceEeeceeeecCCccHHHHHHHHHHcCCCeEEEEEecCh-hHHHHHHHHHHcCCceeEEE
Confidence 34457788988877776554 345578899999999999999999999999999975 99999999999999999887
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCC
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 218 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~ 218 (381)
..+ .|+.++.+++ +|++++.++++.........+.+. .+.+++++++|+++... ...+...+.++++.+++.|+
T Consensus 82 ~~~--~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~a~~~g~ 157 (309)
T TIGR01231 82 ISG--ETRNCIAILH-EGQQTEILEQGPEISNQEAAGFLKHFEQLLEKVEVVAISGSLP-KGLPQDYYAQIIERCQNKGV 157 (309)
T ss_pred CCC--CCEEeEEEEe-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhccCCEEEEECCCC-CCcCHHHHHHHHHHHHhCCC
Confidence 654 4555555553 688888765332111000111111 24578899999988643 23346777899999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC-ChH---HHHHHHHhcCCCEEEEEecCCceE
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD---AVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-~~~---~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
++++|++.+ . ...+...++++|++++|++|++.+++.... +.+ +.++.+...|++.|+||+|++|++
T Consensus 158 ~v~~D~~~~--------~-~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~vivT~G~~G~~ 228 (309)
T TIGR01231 158 PVVLDCSGA--------T-LQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQPLFSGIEWIIVSLGAQGAF 228 (309)
T ss_pred eEEEECChH--------H-HHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCceE
Confidence 999999631 1 122334457899999999999999986533 223 334455568999999999999999
Q ss_pred EEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHH
Q 016868 295 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLN 374 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~ 374 (381)
++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.+.. ..+++++++
T Consensus 229 ~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-------~~~a~~~a~a~aa~~~~~~~~~--~~~~~~~~~ 299 (309)
T TIGR01231 229 AKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-------DHDLLKKANTLGMLNAQEAQTG--HVNLNNYDD 299 (309)
T ss_pred EEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcccC--CCCHHHHHH
Confidence 9988888889999999999999999999999999999999 9999999999999999998875 478999999
Q ss_pred HHhCC
Q 016868 375 AIHAP 379 (381)
Q Consensus 375 ~l~~~ 379 (381)
++++|
T Consensus 300 ~~~~i 304 (309)
T TIGR01231 300 LFNQI 304 (309)
T ss_pred HHhce
Confidence 98876
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=302.92 Aligned_cols=275 Identities=27% Similarity=0.321 Sum_probs=222.3
Q ss_pred cEEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
.|+++|++++|++..+++.|.+. .......+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++.
T Consensus 1 ~v~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~~~lG~D~~g~~i~~~L~~~gI~~~~ 80 (288)
T cd01941 1 EIVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESEKAGLNVRG 80 (288)
T ss_pred CeEEEEeEEEeeeecccCccccCCCCCeeEEEccCcHHHHHHHHHHHhCCCcEEEEEEecCccHHHHHHHHHHcCCccce
Confidence 38999999999998877755431 234678899999999999999999999999999999999999999999999998
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+. .++.+|+.++++++.+|++++... .......++.+.++ .+.+.+++++++++ ..+++....+++.+++.
T Consensus 81 ~~-~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~-----~~~~~~~~~~~~~a~~~ 153 (288)
T cd01941 81 IV-FEGRSTASYTAILDKDGDLVVALA-DMDIYELLTPDFLRKIREALKEAKPIVVDA-----NLPEEALEYLLALAAKH 153 (288)
T ss_pred ee-eCCCCcceEEEEECCCCCEEEEEe-chHhhhhCCHHHHHHHHHHHhcCCEEEEeC-----CCCHHHHHHHHHhhhhc
Confidence 87 667789999999998999887332 23333334433222 34578899997754 23455677888889999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCce
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGC 293 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~ 293 (381)
+.++++||+... ..++. .++++++|++++|++|++.+++....+. .++++.+.+.+++.||||+|++|+
T Consensus 154 ~~~v~~d~~~~~-------~~~~~-~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~Ga 225 (288)
T cd01941 154 GVPVAFEPTSAP-------KLKKL-FYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAKGV 225 (288)
T ss_pred CCcEEEEccchH-------Hhccc-hhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHHHHcCCcEEEEEeCCCcE
Confidence 999999986321 11211 1578899999999999999998754322 244567778899999999999999
Q ss_pred EEEeC---CceEEEcc-ccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 294 RYYTK---DFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 294 ~~~~~---~~~~~~~~-~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+++++ +..+++|+ ++++++||+||||+|.|||++++++|++ +++|+++|+++|+.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-------~~~al~~a~~~Aa~~~~ 287 (288)
T cd01941 226 LLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------LDDSLRFAQAAAALTLE 287 (288)
T ss_pred EEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 99987 46678888 5789999999999999999999999999 99999999999999986
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=303.20 Aligned_cols=284 Identities=26% Similarity=0.305 Sum_probs=229.2
Q ss_pred cceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCC
Q 016868 68 EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPG 144 (381)
Q Consensus 68 ~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~ 144 (381)
++.+|++..+++.+.. ...+....+||.+.|+|.++++||.++.++|.+|+| +|+.+++.|++.||++.++....
T Consensus 7 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l~~lg~~~~~i~~vG~D-~g~~i~~~l~~~gI~~~~i~~~~- 84 (303)
T TIGR03168 7 NPAIDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGFLGGF-TGEFIEALLAEEGIKNDFVEVKG- 84 (303)
T ss_pred chHHeEEEEcCccccCceeecCcccccCCcchhhHHHHHHHcCCCeEEEEEeCCc-hhHHHHHHHHHcCCCceEEECCC-
Confidence 4567777766664332 244567899999999999999999999999999999 79999999999999999887653
Q ss_pred CCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCC
Q 016868 145 ARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 218 (381)
Q Consensus 145 ~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~ 218 (381)
.|+.++++.+.+|++..+.+. +. .+++++++. +.+++++++|++++.. ...+.+....+++.++++|+
T Consensus 85 -~t~~~~~~~~~~g~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~g~ 158 (303)
T TIGR03168 85 -ETRINVKIKESSGEETELNEP--GP--EISEEELEQLLEKLRELLASGDIVVISGSLP-PGVPPDFYAQLIAIARKRGA 158 (303)
T ss_pred -CCEEeEEEEeCCCCEEEEeCc--CC--CCCHHHHHHHHHHHHHhccCCCEEEEeCCCC-CCCCHHHHHHHHHHHHHCCC
Confidence 466677777778877655442 22 255544431 3478999999987532 23345677888999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++++|++.. ..+ ..+..++|++++|+.|+..+++....+. .++++.+.+.+++.||||+|++|+++
T Consensus 159 ~v~~D~~~~--------~~~---~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vviT~g~~G~~~ 227 (303)
T TIGR03168 159 KVILDTSGE--------ALR---EALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARELLDRGAENVLVSLGADGALL 227 (303)
T ss_pred EEEEECCcH--------HHH---HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEeecCCCcEE
Confidence 999999621 112 2233579999999999999998754432 34557778889999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++++.+++|+++++++||+||||+|.|+|++++++|++ +++|+++|+++|++++++.|+. .|+.++++++
T Consensus 228 ~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-------i~~a~~~A~~~aa~~~~~~G~~--~~~~~~~~~~ 298 (303)
T TIGR03168 228 VTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-------LEEALRFAVAAGSAAAFSPGTG--LPDPEDVEEL 298 (303)
T ss_pred EeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcC--CCCHHHHHHH
Confidence 998888899999999999999999999999999999999 9999999999999999999984 5899999999
Q ss_pred HhCC
Q 016868 376 IHAP 379 (381)
Q Consensus 376 l~~~ 379 (381)
+.++
T Consensus 299 ~~~~ 302 (303)
T TIGR03168 299 LDQV 302 (303)
T ss_pred Hhhc
Confidence 8875
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=302.53 Aligned_cols=291 Identities=21% Similarity=0.218 Sum_probs=233.1
Q ss_pred EEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 63 vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
+.+.=++.+|+++.+++.+.. ........+||++.|+|++|++||.++.+++.+|+ .+|+++++.|++.||+++++
T Consensus 5 ~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~i~~vG~-~~g~~i~~~l~~~gv~~~~~ 83 (309)
T PRK10294 5 YTLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINVARAIAHLGGSATAIFPAGG-ATGEHLVSLLADENVPVATV 83 (309)
T ss_pred EEEecChHHeEEEEeCceeeCCeEEeccceecCCccHHHHHHHHHHcCCCeEEEEEecC-ccHHHHHHHHHHcCCCceEE
Confidence 334458999999988876543 34566788999999999999999999999999997 69999999999999999999
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch-----hhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
...++. +...++..+++|++++..+. +.. ++.++++. ..++++++++++++.. ...+.+.+.++++.++
T Consensus 84 ~~~~~~-~~~~~i~~~~~g~~~~~~~~--~~~--~~~~~~~~l~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~a~ 157 (309)
T PRK10294 84 EAKDWT-RQNLHVHVEASGEQYRFVMP--GAA--LNEDEFRQLEEQVLEIESGAILVISGSLP-PGVKLEKLTQLISAAQ 157 (309)
T ss_pred ECCCCC-eeeEEEEEcCCCcEEEEECC--CCC--CCHHHHHHHHHHHHhcCCCCEEEEeCCCC-CCCCHHHHHHHHHHHH
Confidence 876553 33344566778887766542 222 44444332 2367889999987643 3345677889999999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcC-CCEEEEEecC
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHAN-LKLLLVTEGP 290 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g-~~~vvvt~G~ 290 (381)
+.|+++++|++. ...+..+ .++++|++++|++|+..|++....+. +++++.+++.+ ++.||||+|+
T Consensus 158 ~~g~~v~~D~~~--------~~~~~~~--~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l~~~~~~~~vvvT~G~ 227 (309)
T PRK10294 158 KQGIRCIIDSSG--------DALSAAL--AIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELVNSGKAKRVVVSLGP 227 (309)
T ss_pred HcCCeEEEeCCC--------HHHHHHH--hcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEEecCC
Confidence 999999999952 1112211 24679999999999999998764433 35567777776 8999999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+|++++++++.+++++++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+.. ..++
T Consensus 228 ~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-------~~~al~~a~a~aa~~v~~~G~~~--~~~~ 298 (309)
T PRK10294 228 QGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTRL--CSHD 298 (309)
T ss_pred CceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCC--CCHH
Confidence 99999988888889998999999999999999999999999999 99999999999999999999864 6888
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
+++++++++
T Consensus 299 ~~~~~~~~~ 307 (309)
T PRK10294 299 DTQKIYAYL 307 (309)
T ss_pred HHHHHHHHh
Confidence 999888764
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=295.50 Aligned_cols=274 Identities=25% Similarity=0.271 Sum_probs=222.7
Q ss_pred cEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
-..++|+.++|++..+++.+.. ........+||++.|+|.+|++||.++.++|.+|+| +|+++++.|++.||++.+
T Consensus 2 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~v~~is~vG~D-~g~~i~~~l~~~gi~~~~ 80 (289)
T cd01164 2 IYTVTLNPAIDLTIELDQLQPGEVNRVSSTRKDAGGKGINVARVLKDLGVEVTALGFLGGF-TGDFFEALLKEEGIPDDF 80 (289)
T ss_pred EEEEecChHHeEEEEcCcccCCceeecccccccCCcchhHHHHHHHHcCCCeEEEEEccCc-hhHHHHHHHHHcCCCceE
Confidence 3568899999999999887644 345677899999999999999999999999999999 899999999999999998
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+.... .|++.+++.+.+|+++.+.. ... .+++++++. +.+++++++|+++.... ....+....+++.
T Consensus 81 ~~~~~--~t~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~ 153 (289)
T cd01164 81 VEVAG--ETRINVKIKEEDGTETEINE--PGP--EISEEELEALLEKLKALLKKGDIVVLSGSLPP-GVPADFYAELVRL 153 (289)
T ss_pred EECCC--CCEEEEEEEeCCCCEEEEeC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEEEeCCCCC-CcCHHHHHHHHHH
Confidence 87653 46777777777677665543 222 244444321 34678999999875322 2234567788888
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEe
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~ 288 (381)
+++.++++++|++.+ ..+ +++ +.+|++++|++|++.+++....+. .++++.+.+.+++.|+||+
T Consensus 154 ~~~~~~~i~~D~~~~--------~~~----~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vivt~ 221 (289)
T cd01164 154 AREKGARVILDTSGE--------ALL----AALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLVSL 221 (289)
T ss_pred HHHcCCeEEEECChH--------HHH----HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 999999999999631 112 333 699999999999999998754332 3456778889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
|++|++++.+++.+++++++++++||+||||+|+|||++++++|++ +++|+++|+++|+.++++.|+
T Consensus 222 G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------~~~a~~~A~~~Aa~~~~~~G~ 288 (289)
T cd01164 222 GADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-------LEEALRLAVAAGSATAFSPGT 288 (289)
T ss_pred CCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCccC
Confidence 9999999988888899999999999999999999999999999999 999999999999999999985
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=292.76 Aligned_cols=274 Identities=20% Similarity=0.235 Sum_probs=221.0
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+.+.++|+|+|++++|++....+ .....+||+++|+|.+|+|||.++.++|++|+|.. .+++.
T Consensus 8 ~~~~~~vlvvG~~~~D~i~~~g~-------~~~~~~GG~a~N~A~alarLG~~~~lis~VG~D~~----------~~v~~ 70 (335)
T PLN02630 8 PIPQRRVLIVGNYCHDVLIQNGS-------VTAESLGGAASFISNVLDALSVECELVSKVGPDFL----------YQVSH 70 (335)
T ss_pred CCCCCCEEEEeeeeeeEEEeCCc-------EEEEecCcHHHHHHHHHHHcCCceEEEEEecCCcc----------ccccc
Confidence 45668999999999999977532 14578999999999999999999999999999942 36776
Q ss_pred CCeeecCCCCceEEEEEecC-----CCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRS-----DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
..+.. ++.+|+.+++++++ +|++++... .+++..+++++++...+..++++++.+ +.+.+....+++
T Consensus 71 ~~~~~-~~~~T~~~~~~~~~g~~~~~~e~~i~~~--~ga~~~l~~~di~~~~~~~~~~~~l~~-----ei~~e~~~~~~~ 142 (335)
T PLN02630 71 PPIVI-PDSKTTEFHADFDQGIDGNGHEDRVLKR--VCACDPIEPSDIPDMRYEFGMAVGVAG-----EILPETLERMVE 142 (335)
T ss_pred cceec-CCCCceEEEEEEcCCcccCCCCeEEEEe--ccccCCCChHHCCHHHhcccceeeecC-----CCcHHHHHHHHH
Confidence 55544 67789999988776 567777664 677778888888755567777776543 334567888888
Q ss_pred HHHH-----CCCeEEEeCCCC-CCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEE
Q 016868 212 AAKD-----AGVVLSYDPNLR-LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLL 285 (381)
Q Consensus 212 ~a~~-----~g~~v~~D~~~~-~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vv 285 (381)
.++. +|+.+++||+.. ..+|... ...+.++++++|++++|++|++.+ +.+++ .+ ...|+
T Consensus 143 ~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~---~~~~~~~L~~iDil~~ne~Ea~~l------~~~~~----~~--~~~vv 207 (335)
T PLN02630 143 ICDVVVVDIQALIRVFDPVDGTVKLVKLE---ETGFYDMLPRIGFLKASSEEALFI------DVEEV----RQ--KCCVI 207 (335)
T ss_pred HhhhheeccCceEEecCCcccccccchhh---HHHHHHHHHhCCEEEecHHHHhhc------CHHHH----cc--CCEEE
Confidence 8887 789999999763 4445211 123567899999999999999887 11222 12 24899
Q ss_pred EEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 016868 286 VTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 365 (381)
Q Consensus 286 vt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~ 365 (381)
||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|. .
T Consensus 208 vt~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~ 278 (335)
T PLN02630 208 VTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VPDAALLGNYFGSLAVEQVGI--P 278 (335)
T ss_pred EEECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCC--C
Confidence 9999999999998888899999999999999999999999999999999 999999999999999999995 3
Q ss_pred CCCHHHHHHHHhCC
Q 016868 366 LPTREAVLNAIHAP 379 (381)
Q Consensus 366 ~~~~~~v~~~l~~~ 379 (381)
..++++++++++++
T Consensus 279 ~~~~~~l~~~~~~i 292 (335)
T PLN02630 279 KFDLRQLQRVKDEV 292 (335)
T ss_pred CCCHHHHHHHhhcE
Confidence 46999999998775
|
|
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=311.78 Aligned_cols=288 Identities=21% Similarity=0.213 Sum_probs=224.7
Q ss_pred CcEEEEccceeecccCCC--CC----Cc--cCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHC
Q 016868 61 PLVVCFGEMLIDFVPTVS--GL----SL--AESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKEN 132 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~--~~----~~--~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~ 132 (381)
++|+|+|++++|++...+ .. |. .........+|| +.|+|.+|++||.++.++|.+|+|.+|+++++.|++.
T Consensus 11 ~~ilviG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~ 89 (473)
T PRK11316 11 AGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVNQIEERPGG-AANVAMNIASLGAQARLVGLTGIDEAARALSKLLAAV 89 (473)
T ss_pred CcEEEECccEEeeeeecccceeCCCCCCCEEEeeeEEecCcH-HHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHHHHHc
Confidence 579999999999987642 21 11 123456778999 5999999999999999999999999999999999999
Q ss_pred CCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc---hhhcCCccEEEEccccccCchhHHHHHHH
Q 016868 133 NVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAKIFHYGSISLITEPCKSAHIAA 209 (381)
Q Consensus 133 gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
||+++++.+ ++.+|+.++++++.+++...... . ........+.+. .+.++++++++++++.. ...+....+
T Consensus 90 gI~~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~~l~~~~~v~is~~~~---~~~~~~~~~ 163 (473)
T PRK11316 90 GVKCDFVSV-PTHPTITKLRVLSRNQQLIRLDF-E-EGFEGVDPQPLLERIEQALPSIGALVLSDYAK---GALASVQAM 163 (473)
T ss_pred CCceeEEEc-CCCCCCeeEEEEeCCceEEeccc-c-cCCCchhHHHHHHHHHHHhccCCEEEEecCCc---cchhHHHHH
Confidence 999998876 56689888888875544222111 1 111122333322 24578999999876532 112456788
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh--HHHHHHH-HhcCCCEEEE
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD--DAVVYKL-FHANLKLLLV 286 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~--~~~~~~l-~~~g~~~vvv 286 (381)
++.+++.|+++++||+.... ..++.+|++++|++|++.+++...... .+.++.+ .+.|++.|+|
T Consensus 164 ~~~~k~~g~~vv~Dp~~~~~-------------~~~~~~dil~pN~~Ea~~l~g~~~~~~~~~~~~~~l~~~~g~~~vvV 230 (473)
T PRK11316 164 IQLARKAGVPVLIDPKGTDF-------------ERYRGATLLTPNLSEFEAVVGKCKDEAELVEKGMKLIADYDLSALLV 230 (473)
T ss_pred HHHHHhcCCeEEEeCCCCCc-------------cccCCCeEECcCHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88999999999999964210 235679999999999999998532211 1233444 4689999999
Q ss_pred EecCCceEEEeCCc-eEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 016868 287 TEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 365 (381)
Q Consensus 287 t~G~~G~~~~~~~~-~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~ 365 (381)
|+|++|++++.+++ .+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|++++++.|+.+
T Consensus 231 T~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-------~~~al~~A~a~Aa~~v~~~G~~~- 302 (473)
T PRK11316 231 TRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-------LEEACALANAAAGVVVGKLGTST- 302 (473)
T ss_pred EecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhcccCCCcc-
Confidence 99999999888775 4789999999999999999999999999999999 99999999999999999999864
Q ss_pred CCCHHHHHHHHh
Q 016868 366 LPTREAVLNAIH 377 (381)
Q Consensus 366 ~~~~~~v~~~l~ 377 (381)
++.++++++++
T Consensus 303 -~~~~~l~~~l~ 313 (473)
T PRK11316 303 -VSPIELENALR 313 (473)
T ss_pred -CCHHHHHHHHh
Confidence 78999998887
|
|
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=297.64 Aligned_cols=263 Identities=21% Similarity=0.271 Sum_probs=208.3
Q ss_pred CCCccccCCChHHHHHH---HHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCce
Q 016868 85 SPAFKKAPGGAPANVAV---GIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGERE 161 (381)
Q Consensus 85 ~~~~~~~~GG~~~NvA~---~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~ 161 (381)
...+...+||++.|+|. .++++|.++.++|.+|+|.+|+++++.|+++||+++++. .++.+|++++++++ +|+|+
T Consensus 44 ~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~vG~D~~g~~i~~~L~~~gVd~~~~~-~~~~~T~~~~i~~~-~g~r~ 121 (332)
T PLN02548 44 KYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYE-DESTPTGTCAVLVV-GGERS 121 (332)
T ss_pred cCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEEEcCChhHHHHHHHHHHcCCceeeec-cCCCCCceEEEEEe-cCCce
Confidence 34577889999999755 446679999999999999999999999999999999875 46678999988886 78988
Q ss_pred EEEecCCCccccCChhccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHH
Q 016868 162 FMFYRNPSADMLLQEAELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237 (381)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~ 237 (381)
+..+ .++...++.+++. .+.+++++++|++++.+. .+.+....+++.+++++.++.+|+.. ++|. ...
T Consensus 122 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~~~~~~~~--~~~~--~~~ 193 (332)
T PLN02548 122 LVAN--LSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT--VSPESIMLVAEHAAANNKTFMMNLSA--PFIC--EFF 193 (332)
T ss_pred eeec--cchhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc--CCHHHHHHHHHHHHHcCCEEEEECCC--hhHH--HHh
Confidence 8665 2333344444332 245778999999886442 33467778888899999887777642 3342 223
Q ss_pred HHHHHHHhhhCCEEecCHHHHhhccCCCC---CChHHHHHHHHhc------CCCEEEEEecCCceEEEeCCceEEEccc-
Q 016868 238 REGILSIWETADIIKISEEEISFLTQGED---PYDDAVVYKLFHA------NLKLLLVTEGPDGCRYYTKDFSGRVQGL- 307 (381)
Q Consensus 238 ~~~~~~~l~~~dvl~~N~~E~~~l~~~~~---~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~- 307 (381)
++.+.++++++|++++|++|++.+++... .+.++.++.+.+. +++.||||+|++|++++.+++.+++|+.
T Consensus 194 ~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~ 273 (332)
T PLN02548 194 KDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIP 273 (332)
T ss_pred HHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEecccc
Confidence 55688899999999999999999987532 2333444444432 5789999999999999988888887763
Q ss_pred --cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 308 --KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 308 --~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|+..
T Consensus 274 ~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~eal~~a~aaAa~~v~~~G~~~ 325 (332)
T PLN02548 274 LPKEKLVDTNGAGDAFVGGFLSQLVQGKD-------IEECVRAGNYAANVIIQRSGCTY 325 (332)
T ss_pred CCcCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 357999999999999999999999999 99999999999999999999874
|
|
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=280.83 Aligned_cols=285 Identities=25% Similarity=0.323 Sum_probs=235.6
Q ss_pred ccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecC
Q 016868 67 GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDP 143 (381)
Q Consensus 67 G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~ 143 (381)
=+..+|++..+++.... +.......+||+|.|||..|+.||.++..+|++|.+ .|++|.+.|++.||..+++.+..
T Consensus 7 LNPaiD~~~~l~~l~~g~vNr~~~~~~~aGGKGINVa~vL~~lG~~~~a~GflGg~-tg~~~~~~l~~~gi~~~fv~v~g 85 (310)
T COG1105 7 LNPALDYTVFLDELELGEVNRVRAVTKTAGGKGINVARVLKDLGIPVTALGFLGGF-TGEFFVALLKDEGIPDAFVEVKG 85 (310)
T ss_pred cChhHhheeecccccccceeeeccceecCCCCceeHHHHHHHcCCCceEEEecCCc-cHHHHHHHHHhcCCCceEEEccC
Confidence 36778888877666553 345567899999999999999999999999999997 89999999999999999998877
Q ss_pred CCCceEEEEEecC-CCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 144 GARTALAFVTLRS-DGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 144 ~~~t~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
.+|+++.+ .+. +|+.+-+.. ++ ..++++++.. ..+++.|++.++|- +....+.+.+.++++.+++.
T Consensus 86 ~TRinvki--~~~~~~~~Tein~--~G--p~is~~~~~~~l~~~~~~l~~~d~VvlsGS-lP~g~~~d~y~~li~~~~~~ 158 (310)
T COG1105 86 DTRINVKI--LDEEDGEETEINF--PG--PEISEAELEQFLEQLKALLESDDIVVLSGS-LPPGVPPDAYAELIRILRQQ 158 (310)
T ss_pred CCeeeEEE--EecCCCcEEEecC--CC--CCCCHHHHHHHHHHHHHhcccCCEEEEeCC-CCCCCCHHHHHHHHHHHHhc
Confidence 66655554 444 444444432 33 3366665542 34778899888773 44566788999999999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCCce
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDGC 293 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~G~ 293 (381)
|+++++|.. .+.+.+.++ ..+++++||.+|++.++|....+.+ ++++.++..|+++|||++|.+|+
T Consensus 159 g~~vilD~S--------g~~L~~~L~---~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l~~~g~~~ViVSlG~~Ga 227 (310)
T COG1105 159 GAKVILDTS--------GEALLAALE---AKPWLIKPNREELEALFGRELTTLEDVIKAARELLAEGIENVIVSLGADGA 227 (310)
T ss_pred CCeEEEECC--------hHHHHHHHc---cCCcEEecCHHHHHHHhCCCCCChHHHHHHHHHHHHCCCCEEEEEecCccc
Confidence 999999985 334444433 3599999999999999999877543 45566888999999999999999
Q ss_pred EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++.+++..+++.+|++++++|+||||++.|||+++++++++ +++++++|+++|+.++++.+. +.++.++++
T Consensus 228 l~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-------~e~~l~~avA~g~a~~~~~~~--~~~~~~~~~ 298 (310)
T COG1105 228 LLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-------LEEALRFAVACGAAAASQKGT--GIPDLDQLK 298 (310)
T ss_pred EEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhhcCCC--CCCCHHHHH
Confidence 99999999999999999999999999999999999999999 999999999999999999997 568999999
Q ss_pred HHHhCC
Q 016868 374 NAIHAP 379 (381)
Q Consensus 374 ~~l~~~ 379 (381)
++++++
T Consensus 299 ~~~~~v 304 (310)
T COG1105 299 KIYAQV 304 (310)
T ss_pred HHhhhe
Confidence 998875
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=276.87 Aligned_cols=254 Identities=21% Similarity=0.240 Sum_probs=199.9
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|+++|++++|++...+ .....+||++.|+|.+|++||.++.++|.+|+|.+|+ ++.|++.||++.. .
T Consensus 1 ~il~iG~~~iD~~~~~~--------~~~~~~GG~~~Nva~~la~lG~~~~~i~~vG~D~~g~--~~~l~~~gv~~~~--~ 68 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------SGVVKPGGPATYASLTLSRLGLTVKLVTKVGRDYPDK--WSDLFDNGIEVIS--L 68 (254)
T ss_pred CeEEEcceeEEEEecCC--------ceEEecCchhhhHHHHHHHhCCCeEEEEeeCCCchHH--HHHHHHCCcEEEE--e
Confidence 58999999999998632 3467899999999999999999999999999999998 6889999999642 2
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEE
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 221 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~ 221 (381)
...+|+.+++.++.+|++.+..+.. ........ ...+.++|++|++++. .+....+.+. ..+|+
T Consensus 69 -~~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~v~ 132 (254)
T cd01937 69 -LSTETTTFELNYTNEGRTRTLLAKC--AAIPDTES---PLSTITAEIVILGPVP------EEISPSLFRK----FAFIS 132 (254)
T ss_pred -cCCCeEEEEEEecCCCCeeeeeccc--cCCccccc---ccccCcccEEEECCCc------chhcHHHHhh----hhhee
Confidence 3346777777777778887776532 22111111 2346789999998652 2233333332 27899
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCCce
Q 016868 222 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301 (381)
Q Consensus 222 ~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 301 (381)
+|++.....|.. ....+.++++++|++++|++|++.+ .+.+++++.+.++|++.|+||+|++|++++++++.
T Consensus 133 ~D~~~~~~~~~~---~~~~~~~~l~~~di~~~n~~E~~~~-----~~~~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~ 204 (254)
T cd01937 133 LDAQGFLRRANQ---EKLIKCVILKLHDVLKLSRVEAEVI-----STPTELARLIKETGVKEIIVTDGEEGGYIFDGNGK 204 (254)
T ss_pred Eccccceeeccc---cchHHHhhcccCcEEEEcHHHHhhc-----CCHHHHHHHHHHcCCCEEEEeeCCcceEEEECCcc
Confidence 999754222322 1223567899999999999999983 23467778888899999999999999999998888
Q ss_pred EEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 302 ~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+++++++++++||+||||+|+|+|++++.+|++ +++|+++|+++|+++++
T Consensus 205 ~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 205 YTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-------IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred EEccccCceeccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 899999999999999999999999999999999 99999999999999874
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=280.62 Aligned_cols=273 Identities=19% Similarity=0.260 Sum_probs=208.8
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
.|+|+|++++|++..... .....+||++.|+|.++++|| ++.++|.+|+| +|+++++.|+++||+++++.+
T Consensus 1 ~v~~~G~~~~D~~~~~~~-------~~~~~~GG~a~N~a~~la~lg-~v~~i~~vG~D-~g~~~~~~l~~~gi~~~~v~~ 71 (277)
T cd01946 1 SLLVVGSVAFDAIETPFG-------KVDKALGGSATYFSLSASYFT-DVRLVGVVGED-FPEEDYKLLNSHNIVTLGLLS 71 (277)
T ss_pred CeEEEEEeeeeeecCCCc-------eeeeccCchHHHHHHHHHHhc-cceeEEeccCc-ChHHHHHHHHhccCcceeEEE
Confidence 389999999999943211 235679999999999999998 69999999999 899999999999999999988
Q ss_pred cCCCCceEEEEEe--cCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 142 DPGARTALAFVTL--RSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 142 ~~~~~t~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
.++.+|....... +.+++++.... ......+.+ .+ .+.+++++++|++++. .+...++++.+++. .+
T Consensus 72 ~~~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~~~v~~~~~~------~~~~~~~~~~~~~~-~~ 140 (277)
T cd01946 72 KEDGKTFHWAGRYHYDLNEADTLDTD--LNVFADFDP-QL-PEHYKDSEFVFLGNIA------PELQREVLEQVKDP-KL 140 (277)
T ss_pred ecCCCeEEEeeEehhhcccccchhhh--hhHHhhcCC-CC-hHHhhcCCEEEECCCC------HHHHHHHHHHHHhC-CE
Confidence 7766663221110 01222222111 111111222 12 2457889999987642 35566778888876 88
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCC
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 299 (381)
+++|+. .+|.. ...+.+.++++++|++++|++|++.+++.. +..++++.+.+.|++.||+|+|.+|++++.++
T Consensus 141 v~~D~~---~~~~~--~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~ 213 (277)
T cd01946 141 VVMDTM---NFWIS--IKPEKLKKVLAKVDVVIINDGEARQLTGAA--NLVKAARLILAMGPKALIIKRGEYGALLFTDD 213 (277)
T ss_pred EEEccH---HHhhh--hhHHHHHHHhccCCEEeCCHHHHHHHhCCc--hHHHHHHHHHHcCCCEEEEecCCCcEEEEECC
Confidence 999983 23431 235567788999999999999999999854 33567788889999999999999999999988
Q ss_pred ceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 300 FSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 300 ~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+.+++|+++++ ++|||||||+|.|||+++|+++++ ..++++++|+++|+++|++++++.|+.
T Consensus 214 ~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~--~~~~~~~~a~~~a~~~aa~~~~~~G~~ 276 (277)
T cd01946 214 GYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKD--TSEANMRRAIIYGSAMASFCVEDFGTK 276 (277)
T ss_pred ceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCC--cchhhHHHHHHHhHHHHhhhhhhcCCC
Confidence 88889998885 899999999999999999998853 123459999999999999999999964
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=241.88 Aligned_cols=285 Identities=25% Similarity=0.305 Sum_probs=227.9
Q ss_pred cEEEEccceeecccCCCCCCcc------------------------CCCCccccCCChHHHHHHHHHHcCC---ceEEEe
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA------------------------ESPAFKKAPGGAPANVAVGIARLGG---SSAFIG 114 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~NvA~~la~LG~---~v~li~ 114 (381)
-.+.+|++++|+...++...+. +....+..+||+..|.++.+++++. .+.++|
T Consensus 8 il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~G 87 (343)
T KOG2854|consen 8 ILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFFG 87 (343)
T ss_pred eeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEEe
Confidence 4667899999999777633211 1335678999999999999999987 899999
Q ss_pred ecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc----hhhcCCccEE
Q 016868 115 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLITKAKIF 190 (381)
Q Consensus 115 ~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~----~~~i~~~~~~ 190 (381)
.||.|.+|+++.+.+++.||++.+. +.++.+|++|.++++.++ |+.+.+ .++...++.++++ +..++++.++
T Consensus 88 svG~Dk~ge~l~~~~~~aGv~~~yq-~~~d~~TGtCavli~~~n-RSL~an--LgAAn~f~~dhl~~~~~~~lveka~v~ 163 (343)
T KOG2854|consen 88 SVGKDKFGELLKSKARAAGVNVHYQ-VKEDGPTGTCAVLITGDN-RSLCAN--LGAANCFKVDHLDKEENWALVEKAKVF 163 (343)
T ss_pred eccCchHHHHHHHHHHhcCceEEEE-eccCCCCceEEEEEeCCC-cchhhc--cchhhccCHHHhcchhhhhhhhheeEE
Confidence 9999999999999999999999865 556779999999998877 776654 5666677777774 3578999999
Q ss_pred EEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---CC
Q 016868 191 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DP 267 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~---~~ 267 (381)
+++++.+ ...++.+..+.+.+.+.+.+.+++...+. -.+...+.+..+++++|+++.|++|++.+.... ..
T Consensus 164 yv~Gffl--tv~p~ai~~v~qh~~e~~r~~~lnlsapf----I~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~ 237 (343)
T KOG2854|consen 164 YVAGFFL--TVSPDAIRKVAQHAAENNRVFTLNLSAPF----ISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETK 237 (343)
T ss_pred EEEEEEE--EeChHHHHHHHHHHHHhcchhheeccchh----HHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCccc
Confidence 9999865 34457888888888888876666653211 135677888899999999999999999987544 22
Q ss_pred ChHHHHHHHH------hcCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCccccc
Q 016868 268 YDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQK 338 (381)
Q Consensus 268 ~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~~~~~ 338 (381)
+..+....+. ....++++||.|.+++++..++....+|..++ +++||+||||+|.+||+++|.+|++
T Consensus 238 dv~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~---- 313 (343)
T KOG2854|consen 238 DVKEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKS---- 313 (343)
T ss_pred chHHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCC----
Confidence 2222222221 13467899999999999999887666666554 5999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 339 EDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 339 ~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+++|++.|+.+|+..+...|..
T Consensus 314 ---l~~cir~g~~aa~~vi~~~G~~ 335 (343)
T KOG2854|consen 314 ---LEECIRAGSYAASHVIRRVGCT 335 (343)
T ss_pred ---HHHHHHHHHHHhhheeeccCCC
Confidence 9999999999999999999975
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=236.85 Aligned_cols=288 Identities=23% Similarity=0.233 Sum_probs=225.0
Q ss_pred CCCcEEEEccceeecccCCCCC--Ccc------CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHH
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGL--SLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~--~~~------~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~ 130 (381)
.+.+|+|+|.+++|.+....-. .++ .......++||. .|||.+++.||.++.++|.+|.|..|+.+.+.|.
T Consensus 9 ~~~kVLVvGDvmLDrY~~G~~~RISPEAPVPVv~v~~e~~rlGGA-aNVa~NiasLGa~a~l~GvvG~Deag~~L~~~l~ 87 (467)
T COG2870 9 KQAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEKEEERLGGA-ANVAKNIASLGANAYLVGVVGKDEAGKALIELLK 87 (467)
T ss_pred cCCcEEEEcceeeeeeccccccccCCCCCCceEEecccccccccH-HHHHHHHHHcCCCEEEEEeeccchhHHHHHHHHH
Confidence 3468999999999998664322 111 344567889998 9999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc---hhhcCCccEEEEccccccCchhHHHHH
Q 016868 131 ENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 131 ~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~---~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
..+|+.. +..+++.+|.+...++..+.+..-+.+...... .....+- ...+.+.+.++++.|.-..- ....
T Consensus 88 ~~~i~~~-l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~--~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L---~~~q 161 (467)
T COG2870 88 ANGIDSD-LLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPI--EDENKLLEKIKNALKSFDALVLSDYAKGVL---TNVQ 161 (467)
T ss_pred hcCcccc-eEeecCCCceeeeeeecccceEEEecccccCcc--hhHHHHHHHHHHHhhcCCEEEEeccccccc---hhHH
Confidence 9999955 556778899988888765554332222111111 1111111 25678899999988743211 1156
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH--HHHHHHH-hcCCCEE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD--AVVYKLF-HANLKLL 284 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~--~~~~~l~-~~g~~~v 284 (381)
.+++.||+.|++|.+||..... +.+..+.+++||..|++...|....+.+ +..+.|. +.+...+
T Consensus 162 ~~I~~ar~~~~pVLvDPKg~Df-------------~~Y~GAtLiTPN~~E~~~~vg~~~~e~el~~~g~kL~~~~~L~al 228 (467)
T COG2870 162 KMIDLAREAGIPVLVDPKGKDF-------------EKYRGATLITPNLKEFEEAVGKCKSEEELEERGQKLKEELDLSAL 228 (467)
T ss_pred HHHHHHHHcCCcEEECCCCcch-------------hhhCCCeecCCCHHHHHHHHcccccHHHHHHHHHHHHHhhCcceE
Confidence 7889999999999999964221 3356899999999999999998766421 2223444 5788999
Q ss_pred EEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 285 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+||++++|+.++..++..|+|+...++-|.|||||+-.|.|..+++.|.+ +++|+.+||++|+..+...|+.
T Consensus 229 LvTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-------~~eAc~lAN~AagiVVgKlGTa- 300 (467)
T COG2870 229 LVTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-------LEEACELANAAAGIVVGKLGTA- 300 (467)
T ss_pred EEEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-------HHHHHHHhhhhcceEEeeccce-
Confidence 99999999999999888999999889999999999999999999999999 9999999999999999999985
Q ss_pred CCCCHHHHHHH
Q 016868 365 ALPTREAVLNA 375 (381)
Q Consensus 365 ~~~~~~~v~~~ 375 (381)
..+.+|+...
T Consensus 301 -tvs~~EL~nA 310 (467)
T COG2870 301 -TVSPEELEMA 310 (467)
T ss_pred -eecHHHHHhh
Confidence 4788888763
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-29 Score=216.13 Aligned_cols=188 Identities=31% Similarity=0.407 Sum_probs=157.9
Q ss_pred cEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+++|++++|.+..++..|.. +.......+||++.|+|.+|++||.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~LG~~~~~~~----------------------- 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLVG----------------------- 57 (196)
T ss_pred CEEEEccceEEEEEEeccCCCCCCeEEeceeeecCCCcHHHHHHHHHHCCCcEEEEE-----------------------
Confidence 4899999999999988876664 2456788999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
+|++|+++.... .+...++++.+++.+
T Consensus 58 -------------------------------------------------~~~v~i~~~~~~----~~~~~~~~~~~~~~~ 84 (196)
T cd00287 58 -------------------------------------------------ADAVVISGLSPA----PEAVLDALEEARRRG 84 (196)
T ss_pred -------------------------------------------------ccEEEEecccCc----HHHHHHHHHHHHHcC
Confidence 678888875322 356778889999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCceE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
+++++|++.....|.. ..+.++++++|++++|++|++.+++....+. .++++.+.+.+++.|++|+|++|++
T Consensus 85 ~~v~~D~~~~~~~~~~-----~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~ 159 (196)
T cd00287 85 VPVVLDPGPRAVRLDG-----EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAI 159 (196)
T ss_pred CeEEEeCCcccccccc-----chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHHHhcCCCEEEEEECCCccE
Confidence 9999999876554432 1256788999999999999999998765542 2456778889999999999999999
Q ss_pred EEe-CCceEEEccccccccCCCCccHHHHHHHHHHHH
Q 016868 295 YYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 330 (381)
Q Consensus 295 ~~~-~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~ 330 (381)
+++ +++.+++|+++++++||+||||+|+|||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 160 VATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred EEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 998 777888998888999999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=206.84 Aligned_cols=276 Identities=18% Similarity=0.279 Sum_probs=210.4
Q ss_pred CCcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
+..|+|+|.+.+|++..++..|.+. ..+-.++-||.+.|++.+|..||.++.|+|.+.....-+++++.|++.|||
T Consensus 4 ~k~VLcVG~~~lD~iTivd~~~fe~~~~r~~~g~wqRgG~asNvcTvlrlLG~~cef~Gvlsr~~~f~~lLddl~~rgId 83 (308)
T KOG2947|consen 4 PKQVLCVGCTVLDVITIVDKYPFEDSEIRCLSGRWQRGGNASNVCTVLRLLGAPCEFFGVLSRGHVFRFLLDDLRRRGID 83 (308)
T ss_pred cceEEEeccEEEEEEEeccCCCCCccceehhhhhhhcCCCcchHHHHHHHhCCchheeeecccchhHHHHHHHHHhcCCC
Confidence 3579999999999998777766552 334578899999999999999999999999999888899999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++++......+.-..+++....|.|+++++ .......+.+++..-.+.+..|+|+.... +.+. .++++...+
T Consensus 84 ishcpftd~~pp~ssiI~~r~s~trTil~~--dks~p~vT~~dF~kvdl~qy~WihfE~Rn-----p~et-lkM~~~I~~ 155 (308)
T KOG2947|consen 84 ISHCPFTDHSPPFSSIIINRNSGTRTILYC--DKSLPDVTATDFEKVDLTQYGWIHFEARN-----PSET-LKMLQRIDA 155 (308)
T ss_pred cccCccccCCCCcceEEEecCCCceEEEEe--cCCCccccHHHhhhcccceeeeEEEecCC-----hHHH-HHHHHHHHH
Confidence 999988766444444444445678888876 34555677777765568899999998642 2222 233333322
Q ss_pred --------CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHh---cC--CC
Q 016868 216 --------AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH---AN--LK 282 (381)
Q Consensus 216 --------~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~---~g--~~ 282 (381)
.++.+++|.. ..++....+...+|+++.+++=++.+. -. +..++.+.++. +| ..
T Consensus 156 ~N~r~pe~qrI~vSvd~e----------n~req~~~l~am~DyVf~sK~~a~~~g-fk--s~rea~~~l~~r~~~~~pkp 222 (308)
T KOG2947|consen 156 HNTRQPEEQRIRVSVDVE----------NPREQLFQLFAMCDYVFVSKDVAKHLG-FK--SPREACEGLYGRVPKGKPKP 222 (308)
T ss_pred hhcCCCccceEEEEEEec----------CcHHHHHHHhhcccEEEEEHHHHhhhc-cC--CHHHHHHHHHhhcccCCCCc
Confidence 4567888873 235566678899999999999887763 22 23566655543 22 24
Q ss_pred EEEEEecCCceEEEeCC-ceEEEccccc-cccCCCCccHHHHHHHHHHH-HcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 283 LLLVTEGPDGCRYYTKD-FSGRVQGLKV-EAVDATGAGDAFVAGILSQL-STDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 283 ~vvvt~G~~G~~~~~~~-~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l-~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
.+|+-++++|+-....+ +.+++++.+- ++||+.|+||+|.|||||++ .++.+ +.||++||+++|+.++..
T Consensus 223 v~I~~w~~eGA~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-------l~eAvdfg~rvas~Kl~g 295 (308)
T KOG2947|consen 223 VLICPWASEGAGALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-------LAEAVDFGNRVASKKLGG 295 (308)
T ss_pred EEEeccccccccccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-------HHHHHHHHHHhhhccccc
Confidence 67888999998766554 6778888764 79999999999999999995 56777 999999999999999998
Q ss_pred cCCC
Q 016868 360 RGAI 363 (381)
Q Consensus 360 ~G~~ 363 (381)
.|..
T Consensus 296 ~Gfd 299 (308)
T KOG2947|consen 296 QGFD 299 (308)
T ss_pred cccc
Confidence 8753
|
|
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=162.90 Aligned_cols=226 Identities=16% Similarity=0.146 Sum_probs=148.5
Q ss_pred eEEEeecCCChHHH-HHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCcc
Q 016868 110 SAFIGKVGADEFGY-MLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAK 188 (381)
Q Consensus 110 v~li~~vG~D~~g~-~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 188 (381)
..+++.-|.|+.|- =+..+++-..- ....+..+.+++...+..|. .+.. . ..+.+ .+++. .+...+
T Consensus 4 ~~vl~iag~d~~ggaG~~aD~~~~~~-----~~~~~~~~~t~~t~~~~~G~-~v~~---~-~~~~l-~~~l~--~l~~~~ 70 (253)
T PRK12413 4 NYILAISGNDIFSGGGLHADLATYTR-----NGLHGFVAVTCLTAMTEKGF-EVFP---V-DKEIF-QQQLD--SLKDVP 70 (253)
T ss_pred CeEEEEeeeCCCCHHHHHHHHHHHHH-----cCCccCeeeEEEecccCCce-EEEE---C-CHHHH-HHHHH--HhhCCC
Confidence 34566677775543 25555543211 11224455666666677774 2221 1 11111 11221 122333
Q ss_pred E--EEEccccccCchhHHHHHHHHHHHH-HCCCeEEEeCCCCCCCCC--CHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 189 I--FHYGSISLITEPCKSAHIAAAKAAK-DAGVVLSYDPNLRLPLWP--SADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 189 ~--~~~~~~~~~~~~~~~~~~~~l~~a~-~~g~~v~~D~~~~~~~~~--~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
+ +.++.+ . + .+....+++.++ ..++++++||+.+...|. ..+...+.+.++++++|+++||++|++.|+|
T Consensus 71 ~~~i~~G~l-~-~---~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g 145 (253)
T PRK12413 71 FSAIKIGLL-P-N---VEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSG 145 (253)
T ss_pred CCEEEECCc-C-C---HHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhC
Confidence 3 333332 1 2 233444444444 468899999999988883 3455666777789999999999999999999
Q ss_pred CCCCCh---HHHHHHHHhcCCCEEEEEecCCce-----EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 264 GEDPYD---DAVVYKLFHANLKLLLVTEGPDGC-----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 264 ~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~-----~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
....+. .++++.+.+.|++.|+||.|++|. .++..++..+.+.+++..+|++||||+|+|+|++++.+|++
T Consensus 146 ~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~g~~- 224 (253)
T PRK12413 146 KEIKTLEDMKEAAKKLYDLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVKGKS- 224 (253)
T ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 765443 356678888999999999998642 23333444556666777899999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 336 LQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+++|+++|.++....+++-
T Consensus 225 ------l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 225 ------PLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999888777653
|
|
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=163.11 Aligned_cols=166 Identities=22% Similarity=0.108 Sum_probs=130.4
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHC--CCeEEEeCCCC--CCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHh
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPNLR--LPLWPSADKAREGILSIWE-TADIIKISEEEIS 259 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~--g~~v~~D~~~~--~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~ 259 (381)
...+.+..+. +.+....+.+.++++.++++ ++++++||+.. ..+|...+...+.+.+++. ++|++++|..|++
T Consensus 71 ~~~~~v~~G~--l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~ 148 (254)
T cd01173 71 LEYDAVLTGY--LGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELE 148 (254)
T ss_pred ccCCEEEEec--CCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHH
Confidence 4567775443 33456678888999999887 89999999753 2455333456667777776 9999999999999
Q ss_pred hccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC------ceEEEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHH
Q 016868 260 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD------GCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQL 329 (381)
Q Consensus 260 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~------G~~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l 329 (381)
.|+|....+. .++++.+.+.|++.|+||.|.. |++++++++.++++.+.++ ++|++|+||+|+|+|++++
T Consensus 149 ~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l 228 (254)
T cd01173 149 LLTGKKINDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARL 228 (254)
T ss_pred HHcCCCcCCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHH
Confidence 9999865432 4566788889999999999985 7888877665556665566 7999999999999999999
Q ss_pred HcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 330 STDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 330 ~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++|++ +++|+++|++.....+..
T Consensus 229 ~~g~~-------~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 229 LKGKS-------LAEALEKALNFVHEVLEA 251 (254)
T ss_pred HcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999 999999999988776643
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.3e-19 Score=162.79 Aligned_cols=167 Identities=22% Similarity=0.128 Sum_probs=130.5
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCCCCCC---CCCCHHHHHHHHHHHhhhCCEEecCHHHH
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEI 258 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~ 258 (381)
+...+++..+. +.+....+.+.++++.+++.+ +.+++||..+.. .|...+........+++++|+++||..|+
T Consensus 72 l~~~~~v~~G~--l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea 149 (286)
T PRK05756 72 LGECDAVLSGY--LGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFEL 149 (286)
T ss_pred cccCCEEEECC--CCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHH
Confidence 44678665443 335556778888888888765 568899986652 44343334444456899999999999999
Q ss_pred hhccCCCCCChH---HHHHHHHhcCCCEEEEEecCC--------ceEEEeCCceEEEccccccc-cCCCCccHHHHHHHH
Q 016868 259 SFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD--------GCRYYTKDFSGRVQGLKVEA-VDATGAGDAFVAGIL 326 (381)
Q Consensus 259 ~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~--------G~~~~~~~~~~~~~~~~v~v-vdttGAGDaF~ag~l 326 (381)
+.|++....+.+ ++++.+++.|++.|+||.|.. |++++++++.++++.++++. +|++||||+|+|+|+
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~ 229 (286)
T PRK05756 150 EWLSGRPVETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHH
Confidence 999997654433 455678889999999999876 47777777777777777777 799999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 327 SQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 327 ~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+++++|++ +++|+++|++.....+..
T Consensus 230 a~l~~g~~-------~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 230 ARLLQGGS-------LEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999887764
|
|
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=159.69 Aligned_cols=161 Identities=20% Similarity=0.169 Sum_probs=122.8
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCCCCCC---CCCCHHHHHHHH-HHHhhhCCEEecCHHH
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGI-LSIWETADIIKISEEE 257 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~-~~~l~~~dvl~~N~~E 257 (381)
+.++|+++.+. +.+....+.+.++++.+++.+ +.+++||..+.. .|... ...+.+ ..+++++|++++|..|
T Consensus 72 ~~~~d~v~~G~--l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~-~~~~~~~~~ll~~adii~pN~~E 148 (286)
T TIGR00687 72 LNQCDAVLSGY--LGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAP-DLLEVYREKAIPVADIITPNQFE 148 (286)
T ss_pred cccCCEEEECC--CCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeCh-hHHHHHHHhccccccEecCCHHH
Confidence 45788875554 334556678888898888765 678899965432 23222 344444 4588999999999999
Q ss_pred HhhccCCCCCChH---HHHHHHHhcCCCEEEEE-ecCCce--------EEEeCCceEEEcccccc-ccCCCCccHHHHHH
Q 016868 258 ISFLTQGEDPYDD---AVVYKLFHANLKLLLVT-EGPDGC--------RYYTKDFSGRVQGLKVE-AVDATGAGDAFVAG 324 (381)
Q Consensus 258 ~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt-~G~~G~--------~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag 324 (381)
++.|+|.+..+.+ ++++.+++.|++.|+|| .|.+|+ +++++++.++++.++++ ++|++||||+|+|+
T Consensus 149 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A~ 228 (286)
T TIGR00687 149 LELLTGRKINTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAAL 228 (286)
T ss_pred HHHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHHH
Confidence 9999997654433 45677888999999999 688775 44555666677777777 69999999999999
Q ss_pred HHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 016868 325 ILSQLSTDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 325 ~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
|++++++|++ +++|+++|+++..
T Consensus 229 ~l~~l~~g~~-------~~~al~~A~~~v~ 251 (286)
T TIGR00687 229 LLATLLHGNS-------LKEALEKTVSAVY 251 (286)
T ss_pred HHHHHhcCCC-------HHHHHHHHHHHHH
Confidence 9999999999 9999999999933
|
ThiD and related proteins form an outgroup. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=155.40 Aligned_cols=165 Identities=13% Similarity=0.087 Sum_probs=125.7
Q ss_pred hcCC--ccEEEEccccccCchhHHHHHHHHHHHHHCCCe-EEEeCCCCCCCC---CCHHHHHHHHHHHhhhCCEEecCHH
Q 016868 183 LITK--AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRLPLW---PSADKAREGILSIWETADIIKISEE 256 (381)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~-v~~D~~~~~~~~---~~~~~~~~~~~~~l~~~dvl~~N~~ 256 (381)
.+++ .+.+.++.+. +.+....+.+.+++.+.+ +++||....... ...+........+++++|+++||+.
T Consensus 67 l~~d~~~~~ikiG~l~-----~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~ 141 (268)
T PRK12412 67 TIEGVGVDALKTGMLG-----SVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLF 141 (268)
T ss_pred HHhCCCCCEEEECCCC-----CHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHH
Confidence 4444 6788776431 335666777777887776 999997533211 1122223344568899999999999
Q ss_pred HHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCce------EEEeCCceEEEccccccccCCCCccHHHHHHHHH
Q 016868 257 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 257 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
|++.|+|....+. .++++.+.+.|++.|+||.|++|+ +++.+++.++++.++++.+|++|+||+|+|+|++
T Consensus 142 Ea~~L~g~~~~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa 221 (268)
T PRK12412 142 EAYQLSGVKINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITA 221 (268)
T ss_pred HHHHHhCcCCCCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHH
Confidence 9999999764432 456678888999999999998763 4455555567888889999999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+|++|++ +++|+++|.++....+.+
T Consensus 222 ~l~~g~~-------l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 222 ELAKGKP-------VKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999999887765
|
|
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=160.19 Aligned_cols=165 Identities=20% Similarity=0.168 Sum_probs=125.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC--CCCCC-HHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL--PLWPS-ADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~--~~~~~-~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.+|.++++.+ .+....+.+.++++.+++.++++++||+... .+|.. .+...+.+.++++++|+++||+.|++.|+
T Consensus 75 ~~~aik~G~l--~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 152 (284)
T PRK07105 75 KFDAIYSGYL--GSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLL 152 (284)
T ss_pred ccCEEEECcC--CCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHc
Confidence 5777877643 3444455666667666777899999998543 34532 23456667789999999999999999999
Q ss_pred CCCCC----Ch---HHHHHHHHhcCCCEEEEEe-----cCCceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 263 QGEDP----YD---DAVVYKLFHANLKLLLVTE-----GPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 263 ~~~~~----~~---~~~~~~l~~~g~~~vvvt~-----G~~G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|.... +. .++++.+.+.|++.|+||. |..|+++++++ ..++++.+.++ +|++|+||+|+|+|+++
T Consensus 153 g~~~~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~aa~~~~ 231 (284)
T PRK07105 153 DKPYLEKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYIP-AHYPGTGDIFTSVITGS 231 (284)
T ss_pred CCCcCcCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecccC-CCcCChhHHHHHHHHHH
Confidence 97532 12 3456778889999999999 66788888653 34445554444 89999999999999999
Q ss_pred HHcCCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 329 LSTDFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 329 l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+++|++ +++|+++|.+++...+.+-
T Consensus 232 l~~g~~-------l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 232 LLQGDS-------LPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HhCCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999998888754
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=154.36 Aligned_cols=160 Identities=18% Similarity=0.167 Sum_probs=125.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCC-eEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~-~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
.+.+.++-+ . +.+.+..+++.+++++. ++++||.... .++ +.+........+++++|+++||..|++.|
T Consensus 68 ~~aikiG~l--~---~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 141 (254)
T TIGR00097 68 VDAAKTGML--A---SAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLL-EEEAIEALRKRLLPLATLITPNLPEAEAL 141 (254)
T ss_pred CCEEEECCc--C---CHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCC-CHHHHHHHHHhccccccEecCCHHHHHHH
Confidence 466776632 1 23566777788888888 6999997543 222 22222333446789999999999999999
Q ss_pred cCCCCCCh---HHHHHHHHhcCCCEEEEEecC----Cce-EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCC
Q 016868 262 TQGEDPYD---DAVVYKLFHANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 262 ~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
++....+. .++++.+.+.|++.|+||.|. +|. +++++++.++++.++++++|++|+||+|.|+|++++++|+
T Consensus 142 ~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g~ 221 (254)
T TIGR00097 142 LGTKIRTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKGL 221 (254)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCCC
Confidence 98754432 356678888999999999997 344 6677777778888889999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+ +++|+++|++++...+.+
T Consensus 222 ~-------l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 222 S-------LKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred C-------HHHHHHHHHHHHHHHHHH
Confidence 9 999999999999988875
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-18 Score=151.34 Aligned_cols=161 Identities=18% Similarity=0.139 Sum_probs=123.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCC---CHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWP---SADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~-g~~v~~D~~~~~~~~~---~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+++.+.++.+ . ..+....+.+.+++. +.++++||..+...+. +.+........+++++|+++||..|++.|
T Consensus 68 ~~~~i~~G~l--~---~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 142 (242)
T cd01169 68 PVDAIKIGML--G---SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELL 142 (242)
T ss_pred CCCEEEECCC--C---CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHH
Confidence 5677777543 2 234555666666665 8899999986543221 22222334456779999999999999999
Q ss_pred cCCCCCCh---HHHHHHHHhcCCCEEEEEecCCc-----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCC
Q 016868 262 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 262 ~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
++....+. .++++.+.+.|++.|+||.|++| .+++++++.++++.++++++|++|+||+|+|+|++++++|.
T Consensus 143 ~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~ 222 (242)
T cd01169 143 TGLEIATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGL 222 (242)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCC
Confidence 99765432 34567788899999999999885 36677777788898888899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+ +++|+++|+..-...+.
T Consensus 223 ~-------~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 223 S-------LEEAVREAKEYVTQAIR 240 (242)
T ss_pred C-------HHHHHHHHHHHHHHHHH
Confidence 9 99999999998776654
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.6e-18 Score=154.08 Aligned_cols=161 Identities=20% Similarity=0.192 Sum_probs=124.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCC-eEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~-~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
+.+.+.++.+ . ..+....+.+.+++.+. ++++||..+. .+| ..+......+++++++|+++||..|++.
T Consensus 73 ~~~ai~iG~l--~---~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 146 (266)
T PRK06427 73 RIDAVKIGML--A---SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLL-ADDAVAALRERLLPLATLITPNLPEAEA 146 (266)
T ss_pred CCCEEEECCc--C---CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCC-CHHHHHHHHHhhhCcCeEEcCCHHHHHH
Confidence 4577777643 2 23455666777777775 7999997543 223 2222233334688999999999999999
Q ss_pred ccCCCCCC----hHHHHHHHHhcCCCEEEEEecC--Cce----EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHH
Q 016868 261 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 330 (381)
Q Consensus 261 l~~~~~~~----~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~ 330 (381)
|+|....+ ..++++.+.+.|++.|+||.|+ +|. +++++++.++++.++++.+|++|+||+|+|+|+++++
T Consensus 147 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~ 226 (266)
T PRK06427 147 LTGLPIADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELA 226 (266)
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHH
Confidence 99975432 2456678888999999999998 554 6677666778888888899999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 331 TDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 331 ~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+|++ +++|+++|++++...+.+
T Consensus 227 ~g~~-------l~~A~~~A~~~~~~~i~~ 248 (266)
T PRK06427 227 KGAS-------LLDAVQTAKDYVTRAIRH 248 (266)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999988876
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.8e-18 Score=154.11 Aligned_cols=165 Identities=18% Similarity=0.127 Sum_probs=124.0
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHH-HHHhhhCCEEecCHHH
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGI-LSIWETADIIKISEEE 257 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~-~~~l~~~dvl~~N~~E 257 (381)
+.++|.++++.+ .+....+.+.++++..+. .+.++++||.... .+|.+.+. .+.+ +.+++.+|+++||..|
T Consensus 86 l~~~d~i~~G~l--~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~-~~~~~~~Ll~~advitPN~~E 162 (281)
T PRK08176 86 LRQLRAVTTGYM--GSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDL-PEAYRQHLLPLAQGLTPNIFE 162 (281)
T ss_pred cccCCEEEECCC--CCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccH-HHHHHHHhHhhcCEeCCCHHH
Confidence 347888888753 344555666677766554 4788999997443 24533333 3344 4588999999999999
Q ss_pred HhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCCc-------eEEEeCCceEEEccccccccCCCCccHHHHHHHHH
Q 016868 258 ISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 258 ~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
++.|+|....+.+ ++++++++.|++.|+||.|+.| ++++++++.+. ...+...+|++|+||+|+|+|++
T Consensus 163 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~GaGD~faa~~~a 241 (281)
T PRK08176 163 LEILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVNV-ISHPRVDTDLKGTGDLFCAELVS 241 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEE-EecCccCCCCCChhHHHHHHHHH
Confidence 9999997644433 4568888899999999999988 56677665443 33444567999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++++|.+ +++|+++|+..-...+..
T Consensus 242 ~l~~g~~-------l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 242 GLLKGKA-------LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999887766653
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=162.35 Aligned_cols=149 Identities=19% Similarity=0.200 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHH
Q 016868 202 CKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVY 274 (381)
Q Consensus 202 ~~~~~~~~l~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~ 274 (381)
+.+.+..+++.+++.++++++||+.+. .+|. .+........+++++|+++||..|++.|+|....+. .++++
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~-~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~ 160 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLR-EDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAK 160 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCC-HHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 356778889999999999999997653 3443 222333446788999999999999999999764433 35567
Q ss_pred HHHh-cCCCEEEEEecC----Cce-EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 016868 275 KLFH-ANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 348 (381)
Q Consensus 275 ~l~~-~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~ 348 (381)
.|.+ .|++.|+||.|. +|+ +++.+++.++++.++++++|++||||+|+|+|++++++|++ +++|+++
T Consensus 161 ~L~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~~-------l~eAl~~ 233 (448)
T PRK08573 161 YIVEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGLD-------PEEAIKT 233 (448)
T ss_pred HHHHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHH
Confidence 7764 899999999985 344 45566666788888899999999999999999999999999 9999999
Q ss_pred HHHHHHHHhh
Q 016868 349 ANACGALTVM 358 (381)
Q Consensus 349 A~~~Aa~~~~ 358 (381)
|+.+....++
T Consensus 234 A~~~~~~al~ 243 (448)
T PRK08573 234 AKKFITMAIK 243 (448)
T ss_pred HHHHHHHHHH
Confidence 9999999888
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=145.64 Aligned_cols=161 Identities=16% Similarity=0.110 Sum_probs=120.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCC-CeEEEeCCCCCCC---CCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPL---WPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g-~~v~~D~~~~~~~---~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.+.+.++-+ .+ .+.+..+.+.+++.+ .++++||.....- ....+........+++.+|+++||..|++.|+
T Consensus 75 ~~aikiG~l--~s---~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~ 149 (270)
T PRK12616 75 VDAMKTGML--PT---VDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLS 149 (270)
T ss_pred CCEEEECCC--CC---HHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHc
Confidence 567766643 22 345556666667666 4699999764321 11122233333448889999999999999999
Q ss_pred CC-CCCCh---HHHHHHHHhcCCCEEEEEecCCce------EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcC
Q 016868 263 QG-EDPYD---DAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 263 ~~-~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
+. ...+. .++++.+.+.|++.|+||.|.+|. +++++++.++++.++++.+|++|+||+|+|+|+++|++|
T Consensus 150 g~~~~~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~g 229 (270)
T PRK12616 150 GMGEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKG 229 (270)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHCC
Confidence 86 33332 356678888999999999998762 556666667788888889999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
.+ +++|+++|.......+..
T Consensus 230 ~~-------l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 230 SE-------VKEAIYAAKEFITAAIKE 249 (270)
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999998877765
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=140.16 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=115.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCCC--CCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNL--RLPLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~~--~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+.+++..+.+. +....+.+.++++.+++.+ +++++||.. +..+|. .+...+.+.++++++|+++||++|++.|
T Consensus 77 ~~~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~-~~~~~~~~~~ll~~~dii~pN~~E~~~L 153 (296)
T PTZ00344 77 DYTYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYV-KEEVVDAYRELIPYADVITPNQFEASLL 153 (296)
T ss_pred cCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEe-CHHHHHHHHHHhhhCCEEeCCHHHHHHH
Confidence 34555555432 3333445555666556555 589999854 455664 4567777888999999999999999999
Q ss_pred cCCCCCChH---HHHHHHHhcCCCEEEEE---ecCCc----eEEEeC------CceEEEccccccccCCCCccHHHHHHH
Q 016868 262 TQGEDPYDD---AVVYKLFHANLKLLLVT---EGPDG----CRYYTK------DFSGRVQGLKVEAVDATGAGDAFVAGI 325 (381)
Q Consensus 262 ~~~~~~~~~---~~~~~l~~~g~~~vvvt---~G~~G----~~~~~~------~~~~~~~~~~v~vvdttGAGDaF~ag~ 325 (381)
+|....+.+ ++++.+.+.|++.|||| .|.+| +++... ++.+.+..++++ ++++|+||+|+|+|
T Consensus 154 ~g~~~~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~ 232 (296)
T PTZ00344 154 SGVEVKDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALL 232 (296)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHH
Confidence 997644333 45677878899999999 55556 444321 234556666665 57799999999999
Q ss_pred HHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 326 LSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 326 l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++.+.+| + +++|+++|.+.....+..
T Consensus 233 ~a~l~~g-~-------~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 233 LAFSHQH-P-------MDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred HHHHhcC-C-------HHHHHHHHHHHHHHHHHH
Confidence 9888887 8 999999998887766553
|
|
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-15 Score=138.37 Aligned_cols=230 Identities=20% Similarity=0.254 Sum_probs=155.6
Q ss_pred EEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 64 VCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 64 lviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
+++|...+|+....++...- ......+..||.+.|.|.++++||.++.||++||+|..+++.+.
T Consensus 344 v~vGa~i~D~~~k~d~d~K~dG~sy~~~~~Qa~GGVarN~A~a~~~lg~d~~liSavG~d~n~~~~~~------------ 411 (614)
T KOG3009|consen 344 VSVGATIVDFEAKTDEDVKDDGGSYNGQVVQAMGGVARNHADALARLGCDSVLISAVGDDNNGHFFRQ------------ 411 (614)
T ss_pred eeecceEEEeEEeecccccccCCcccchhhhhccchhhhHHHHHHHhcCCeeEEEEeccCCcchhhhh------------
Confidence 89999999999887764332 23456789999999999999999999999999999921111110
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
... ..-+...+++ +++++.+++ +.......++++ ++.+..+
T Consensus 412 ----------------------------~~~----~~~e~~~dl~-~a~~I~~Ds-----NiS~~~Ma~il~-ak~~k~~ 452 (614)
T KOG3009|consen 412 ----------------------------NSH----KIVESNEDLL-SADFILLDS-----NISVPVMARILE-AKKHKKQ 452 (614)
T ss_pred ----------------------------hhh----hhhhhhhhhh-cCCEEEEcC-----CCCHHHHHHHHH-hhhccCc
Confidence 000 0001112333 678887664 455667788888 8999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhhccCCC----CCC----hHH---HH---HHHHhcCCCEE
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLTQGE----DPY----DDA---VV---YKLFHANLKLL 284 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~l~~~~----~~~----~~~---~~---~~l~~~g~~~v 284 (381)
|+|+|.... .....++-++ ..++.++||..|+-...... .++ .+. .+ +.........+
T Consensus 453 V~fEPTd~~-------k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~~~~~~~~~~~k~~~~~s~~ 525 (614)
T KOG3009|consen 453 VWFEPTDID-------KVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADGVLELIEKEKTKLLLNTSIF 525 (614)
T ss_pred eEecCCCch-------hhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchHHHHHHHHHHHHhhcccceE
Confidence 999996422 2233333222 35899999999984322211 110 011 11 12223456789
Q ss_pred EEEecCCceEEEeCC-----ceEEEccccc--cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 016868 285 LVTEGPDGCRYYTKD-----FSGRVQGLKV--EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 285 vvt~G~~G~~~~~~~-----~~~~~~~~~v--~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
|+|...+|.++..++ +....|++.. ++++..||||+|+++|+.+++++.+ +.+++.-+..++-...
T Consensus 526 I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~-------v~es~~gg~~~~rall 598 (614)
T KOG3009|consen 526 IVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT-------VVESLQGGQECARALL 598 (614)
T ss_pred EEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc-------hHhhccccHHHHHHHH
Confidence 999999999887665 2344455543 6999999999999999999999999 9999999955554443
Q ss_pred h
Q 016868 358 M 358 (381)
Q Consensus 358 ~ 358 (381)
+
T Consensus 599 s 599 (614)
T KOG3009|consen 599 S 599 (614)
T ss_pred h
Confidence 3
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-14 Score=129.11 Aligned_cols=162 Identities=16% Similarity=0.061 Sum_probs=116.8
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC--CCCCCHHHHHHHHH-HHhhhCCEEecCHHHHhhc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL--PLWPSADKAREGIL-SIWETADIIKISEEEISFL 261 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~--~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 261 (381)
++.+.++. +.++...+.+.++++.+++ .++++++||.++. .+|... ...+.+. .+++.+|+++||..|++.|
T Consensus 87 ~~ai~~G~--l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~-~~~~~~~~~ll~~adiitPN~~Ea~~L 163 (308)
T PLN02978 87 YTHLLTGY--IGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPP-ELVPVYREKVVPLATMLTPNQFEAEQL 163 (308)
T ss_pred cCEEEecc--cCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCCh-hHHHHHHHHHHhhCCeeccCHHHHHHH
Confidence 56665553 3355566777888888876 4578999998654 455433 3445554 5899999999999999999
Q ss_pred cCCCCCCh---HHHHHHHHhcCCCEEEEEecC-CceEEE-e--------CCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 262 TQGEDPYD---DAVVYKLFHANLKLLLVTEGP-DGCRYY-T--------KDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 262 ~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~-~G~~~~-~--------~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
+|....+. .++++.+.+.|++.||||.+. +|.... . .++.+++..++++.. ++|+||+|+|.+++.
T Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~ 242 (308)
T PLN02978 164 TGIRIVTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGW 242 (308)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHH
Confidence 99764433 355677888999999998754 343322 1 124566777777655 589999999988888
Q ss_pred HHcC-CccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 329 LSTD-FSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 329 l~~g-~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+.+| .+ +++|++.|...-...++.
T Consensus 243 l~~g~~~-------l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 243 SHKYPDN-------LDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HhcCCcC-------HHHHHHHHHHHHHHHHHH
Confidence 8887 68 999999998877766554
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=141.54 Aligned_cols=161 Identities=15% Similarity=0.162 Sum_probs=121.3
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCe-EEEeCCCCC---CCCCCHHHHHHHH-HHHhhhCCEEecCHHHHhhc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRL---PLWPSADKAREGI-LSIWETADIIKISEEEISFL 261 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~-v~~D~~~~~---~~~~~~~~~~~~~-~~~l~~~dvl~~N~~E~~~l 261 (381)
.+.+.++.+. +.+.+..+++.+++.+.+ +++||.... ..+.+. ...+.+ .++++.+|+++||..|++.|
T Consensus 79 ~~aik~G~l~-----~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~-~~~~~l~~~Ll~~adiitPN~~Ea~~L 152 (502)
T PLN02898 79 VDVVKTGMLP-----SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGP-SILSALREELLPLATIVTPNVKEASAL 152 (502)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCH-HHHHHHHHhhhccCeEEcCCHHHHHHH
Confidence 5666666431 245666777777877775 999995322 112222 233334 46889999999999999999
Q ss_pred cCCCC-CC---hHHHHHHHHhcCCCEEEEEecCCc------eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 262 TQGED-PY---DDAVVYKLFHANLKLLLVTEGPDG------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 262 ~~~~~-~~---~~~~~~~l~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
+|... .+ ..++++.+.+.|++.|+||.|..+ .+++++++.++++.++++.+|++|+||+|+|+|++++++
T Consensus 153 ~g~~~~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~~ 232 (502)
T PLN02898 153 LGGDPLETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELAK 232 (502)
T ss_pred hCCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHHc
Confidence 97532 22 245667888899999999999753 356665666678888888899999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|..+....+.+-
T Consensus 233 G~~-------l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 233 GSD-------MLSAVKVAKRYVETALEYS 254 (502)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999888763
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-14 Score=142.58 Aligned_cols=148 Identities=19% Similarity=0.163 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCC--HHHHHHHH-HHHhhhCCEEecCHHHHhhccCCC-CCC---hHH
Q 016868 203 KSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPS--ADKAREGI-LSIWETADIIKISEEEISFLTQGE-DPY---DDA 271 (381)
Q Consensus 203 ~~~~~~~l~~a~~~g~~v~~D~~~~~----~~~~~--~~~~~~~~-~~~l~~~dvl~~N~~E~~~l~~~~-~~~---~~~ 271 (381)
.+.+..+++.++ +.++++||.... .++.. .+...+.+ ..+++.+|+++||..|++.|+|.. ..+ ..+
T Consensus 311 ~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L~g~~~~~~~~~~~~ 388 (504)
T PTZ00347 311 ARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAERILGRKEITGVYEARA 388 (504)
T ss_pred HHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHHHHhCCCCCCCHHHHHH
Confidence 455556666554 678999997532 22321 11112233 257899999999999999999964 222 235
Q ss_pred HHHHHHhcCCCEEEEEecCCc-------eEEEeC--CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHH
Q 016868 272 VVYKLFHANLKLLLVTEGPDG-------CRYYTK--DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 342 (381)
Q Consensus 272 ~~~~l~~~g~~~vvvt~G~~G-------~~~~~~--~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l 342 (381)
+++.+.+.|++.|+||.|.+| .+++.. ++.++++.++++++|++|+||+|+|+|++++++|.+ +
T Consensus 389 aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~fsaaiaa~la~G~~-------l 461 (504)
T PTZ00347 389 AAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCTLASAISSFLARGYT-------V 461 (504)
T ss_pred HHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHHHHHHHHHHHhCCCC-------H
Confidence 667888899999999999863 345543 345678888889999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHhhh
Q 016868 343 RDALRFANACGALTVME 359 (381)
Q Consensus 343 ~~al~~A~~~Aa~~~~~ 359 (381)
++|+++|...-...+..
T Consensus 462 ~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 462 PDAVERAIGYVHEAIVR 478 (504)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999998887766654
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-13 Score=121.29 Aligned_cols=161 Identities=19% Similarity=0.169 Sum_probs=110.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC---CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL---PLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
..+.+.++.+ .+. +.+..+.+..++.+.++++||.... ......+......+.+++.+|+++||..|++.|+
T Consensus 60 ~~~aikiG~l--~~~---~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~ 134 (246)
T PF08543_consen 60 KFDAIKIGYL--GSA---EQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLT 134 (246)
T ss_dssp C-SEEEE-S---SSH---HHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHH
T ss_pred cccEEEEccc--CCc---hhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHh
Confidence 5677777753 233 3344444555567789999995421 1122233333344449999999999999999999
Q ss_pred CCCCCChH---HHHHHHHhcCCCEEEEEecCC----c---eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcC
Q 016868 263 QGEDPYDD---AVVYKLFHANLKLLLVTEGPD----G---CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 263 ~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~----G---~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
+.+..+.+ +++++|++.|++.|+||-+.. + .+++.+++.+++..+..+..+..|.||.|+|+|++.|++|
T Consensus 135 g~~i~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~g 214 (246)
T PF08543_consen 135 GREINSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAKG 214 (246)
T ss_dssp TS--SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHcC
Confidence 97665543 456888889999999998863 2 3445566677777777766789999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhh
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
.+ +++|++.|...-...+.
T Consensus 215 ~~-------l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 215 YS-------LEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp SS-------HHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHH
Confidence 99 99999999888776665
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=136.77 Aligned_cols=158 Identities=18% Similarity=0.161 Sum_probs=112.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.+.+.++- +.+....+.+.++++..+ +.+|++||..+. .++ .+...+.++++++.+|+++||..|++.|+
T Consensus 99 ~~aikiG~--l~s~~~i~~v~~~l~~~~--~~~vVlDPv~~~~~G~~l~--~~~~~~~~~~Ll~~advItPN~~Ea~~Lt 172 (530)
T PRK14713 99 VDAVKIGM--LGDAEVIDAVRTWLAEHR--PPVVVLDPVMVATSGDRLL--EEDAEAALRELVPRADLITPNLPELAVLL 172 (530)
T ss_pred CCEEEECC--cCCHHHHHHHHHHHHhCC--CCCEEECCcccCCCCCCCC--CHHHHHHHHHHhhhhheecCChHHHHHHh
Confidence 46666653 223334445555554332 346899997643 333 23456677789999999999999999999
Q ss_pred CCCCC-ChH---HHHHHHHhcCCCEEEEEecCCc-----eEEEe-CCceEEEccccccccCCCCccHHHHHHHHHHHHcC
Q 016868 263 QGEDP-YDD---AVVYKLFHANLKLLLVTEGPDG-----CRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 263 ~~~~~-~~~---~~~~~l~~~g~~~vvvt~G~~G-----~~~~~-~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
|.... +.+ ++++++.+.+...||||.|..+ ..++. +++.++++.++++.+|++|+||+|.|+|+++|++|
T Consensus 173 g~~~~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~G 252 (530)
T PRK14713 173 GEPPATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGRG 252 (530)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHCC
Confidence 96532 223 3456776655568999988642 34444 34467788888899999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHh
Q 016868 333 FSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
.+ +++|+++|...-...+
T Consensus 253 ~~-------l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 253 GD-------WAAALRWATAWLHGAI 270 (530)
T ss_pred CC-------HHHHHHHHHHHHHHHH
Confidence 99 9999999988443333
|
|
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-12 Score=116.06 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHCC-CeEEEeCCCCCCC---CCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC-CCCChH---HHHH
Q 016868 203 KSAHIAAAKAAKDAG-VVLSYDPNLRLPL---WPSADKAREGILSIWETADIIKISEEEISFLTQG-EDPYDD---AVVY 274 (381)
Q Consensus 203 ~~~~~~~l~~a~~~g-~~v~~D~~~~~~~---~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~-~~~~~~---~~~~ 274 (381)
.+.+..+.+..++++ .++++||....+- ....+......++++|.+++++||..|++.|+|. ...+.+ ++++
T Consensus 84 ~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a~~ 163 (263)
T COG0351 84 AEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEAAK 163 (263)
T ss_pred HHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHHHH
Confidence 466677777888888 7799999532221 1123334445558999999999999999999995 554444 3445
Q ss_pred HHHhcCCCEEEEEecCCc----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 016868 275 KLFHANLKLLLVTEGPDG----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 350 (381)
Q Consensus 275 ~l~~~g~~~vvvt~G~~G----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~ 350 (381)
.+.+.|++.|+||-|... -++|+++..+.+..+.++-.++.|+|++|.+++.+.|++|.+ +++|++.|-
T Consensus 164 ~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~~-------l~~AV~~Ak 236 (263)
T COG0351 164 LLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGLS-------LEEAVKKAK 236 (263)
T ss_pred HHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 677899999999988643 366666677788899999999999999999999999999999 999999999
Q ss_pred HHHHHHhh
Q 016868 351 ACGALTVM 358 (381)
Q Consensus 351 ~~Aa~~~~ 358 (381)
..-...++
T Consensus 237 ~fv~~AI~ 244 (263)
T COG0351 237 EFVTRAIR 244 (263)
T ss_pred HHHHHHHh
Confidence 88888777
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-13 Score=119.99 Aligned_cols=157 Identities=15% Similarity=-0.012 Sum_probs=114.3
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHH--HHHhhhCCEEecCHHHHhh
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI--LSIWETADIIKISEEEISF 260 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~--~~~l~~~dvl~~N~~E~~~ 260 (381)
.+.+.|+++++.- +... +....+++.+++++.++++|+.... ..... ..+.+..++++||..|++.
T Consensus 74 ~~~~~d~v~ig~g-l~~~---~~~~~i~~~~~~~~~pvVlDa~~~~--------~~~~~~~~~~~~~~~iltPn~~E~~~ 141 (254)
T cd01171 74 LLERADAVVIGPG-LGRD---EEAAEILEKALAKDKPLVLDADALN--------LLADEPSLIKRYGPVVLTPHPGEFAR 141 (254)
T ss_pred hhccCCEEEEecC-CCCC---HHHHHHHHHHHhcCCCEEEEcHHHH--------HhhcChhhhccCCCEEECCCHHHHHH
Confidence 3556788887652 2121 5667788888888999999985211 00000 0235678999999999999
Q ss_pred ccCCCCCC----hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccc
Q 016868 261 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 336 (381)
Q Consensus 261 l~~~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~ 336 (381)
|++....+ ..++++++.+.+. .+||..| .+.+++++++.++++....+.++++|+||+|+|.+.+.+.+|++
T Consensus 142 L~g~~~~~~~~~~~~~a~~l~~~~~-~~vvlkG-~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~-- 217 (254)
T cd01171 142 LLGALVEEIQADRLAAAREAAAKLG-ATVVLKG-AVTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS-- 217 (254)
T ss_pred HhCCChhhhhhHHHHHHHHHHHHcC-cEEEEcC-CCCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC--
Confidence 99875432 1355677777764 5566677 56677776556677777788999999999998888888889999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhc
Q 016868 337 QKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 337 ~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+.+|+++|+.+.+.+.+..
T Consensus 218 -----~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 218 -----PLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred -----HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887753
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.4e-13 Score=138.59 Aligned_cols=159 Identities=14% Similarity=0.129 Sum_probs=117.3
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHC-CCeEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~-g~~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
.+.+.++-+ .+ .+.+..+.+.+++. +.++++||.... .++ .+...+.+.++++.+|+++||..|++.|
T Consensus 311 ~~aiKiGmL--~s---~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~--~~~~~~~l~~Llp~adlItPN~~Ea~~L 383 (755)
T PRK09517 311 VDAVKLGML--GS---ADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLL--DADATEALRRLAVHVDVVTPNIPELAVL 383 (755)
T ss_pred CCEEEECCC--CC---HHHHHHHHHHHHhCCCCCEEEecccccCCCCCCC--CHHHHHHHHHHhCcccCccCCHHHHHHH
Confidence 466666532 22 35555666666664 467999996532 222 1234455667899999999999999999
Q ss_pred cCCC-CCCh---HHHHHHHHhcCCCEEEEEecC------CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 262 TQGE-DPYD---DAVVYKLFHANLKLLLVTEGP------DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 262 ~~~~-~~~~---~~~~~~l~~~g~~~vvvt~G~------~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
+|.. ..+. .++++.+.+.+...||||.|. .|+++..++..++++.++++.+|++|+||+|+|+|++++++
T Consensus 384 ~g~~~~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La~ 463 (755)
T PRK09517 384 CGEAPAITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIAA 463 (755)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHHC
Confidence 9953 2222 244567766544589999983 46666655556788998999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
|.+ +++|+++|.......+.+
T Consensus 464 G~s-------l~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 464 GES-------VEKALEWATRWLNEALRH 484 (755)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHh
Confidence 999 999999999988877754
|
|
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.2e-12 Score=115.69 Aligned_cols=164 Identities=18% Similarity=0.012 Sum_probs=115.9
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh--CCEEecCHHHH
Q 016868 181 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEI 258 (381)
Q Consensus 181 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~N~~E~ 258 (381)
.+.++++|+++++.- +..+...+.+...++.+++.++++++||..... ... ..+.+.+++.. +|+++||..|+
T Consensus 44 ~~~l~~~d~vvi~~G-~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~---~~~-~~~~~~~ll~~~~~~ilTPN~~Ea 118 (242)
T cd01170 44 EELAKIAGALVINIG-TLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGA---TSF-RTEVAKELLAEGQPTVIRGNASEI 118 (242)
T ss_pred HHHHHHcCcEEEeCC-CCChHHHHHHHHHHHHHHhcCCCEEEcccccCc---chh-HHHHHHHHHhcCCCeEEcCCHHHH
Confidence 356788898887532 234445566667777788899999999964321 111 11334455554 99999999999
Q ss_pred hhccCCCCC------------ChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHH
Q 016868 259 SFLTQGEDP------------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGIL 326 (381)
Q Consensus 259 ~~l~~~~~~------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l 326 (381)
..|++.... +..++++++.+.+...|++| |.... ++++++.++++..+....++.|+||+|+|++.
T Consensus 119 ~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiA 196 (242)
T cd01170 119 AALAGLTGLGKGVDSSSSDEEDALELAKALARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHPLLTKITGTGCLLGAVIA 196 (242)
T ss_pred HHHhCCCCCcCcccCCCcchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCccccCCCchHHHHHHHHH
Confidence 999986532 22445677776666678888 65654 56666677777655445667999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 327 SQLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 327 ~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+.+.+|.+ +.+|+..|...-+....
T Consensus 197 a~LA~g~~-------~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 197 AFLAVGDD-------PLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999988766665553
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=109.20 Aligned_cols=165 Identities=24% Similarity=0.151 Sum_probs=119.7
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHC--CCeEEEeCC--CCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHH
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPN--LRLPLWPSADKAREGILSIWETADIIKISEEEI 258 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~--g~~v~~D~~--~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~ 258 (381)
.+..+|.++.+. +.+...-..+.++++..|+. .+.+++||. ....++...+-......++++.+|+++||..|+
T Consensus 70 ~~~~~davltGY--lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fEL 147 (281)
T COG2240 70 KLGECDAVLTGY--LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFEL 147 (281)
T ss_pred cccccCEEEEcc--CCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHH
Confidence 566788876664 34556667778888888877 455899994 233555544444444447999999999999999
Q ss_pred hhccCCCCCChHH---HHHHHHhcCCCEEEEEecCC-----ceEEEeCC---ceEEEccccccccCCCCccHHHHHHHHH
Q 016868 259 SFLTQGEDPYDDA---VVYKLFHANLKLLLVTEGPD-----GCRYYTKD---FSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 259 ~~l~~~~~~~~~~---~~~~l~~~g~~~vvvt~G~~-----G~~~~~~~---~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
+.|+|....+.++ +++.|.+.|+++|+||.=.. |.+++... ...|+- +.++ .+.+|.||.|+|.|++
T Consensus 148 e~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v~-~~~~GtGDL~sallla 225 (281)
T COG2240 148 EILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLVP-FIPNGTGDLFSALLLA 225 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcCC-CCCCCchHHHHHHHHH
Confidence 9999998776654 44667778899999996433 45555443 222332 3333 3499999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
.+++|.+ +++|+..+..+-...++
T Consensus 226 ~lL~g~~-------~~~al~~~~~~V~evl~ 249 (281)
T COG2240 226 RLLEGLS-------LTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 9999999 99999998877766554
|
|
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=112.65 Aligned_cols=175 Identities=15% Similarity=0.076 Sum_probs=116.9
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+.+..+|++.+++- +.... .+.++++.+++.+.++++|+.. .............+++++||..|++.|
T Consensus 88 ~~~~~~davvig~G-l~~~~---~~~~l~~~~~~~~~pvVlDa~g--------~~l~~~~~~~~~~~~vItPN~~El~~L 155 (272)
T TIGR00196 88 ELLERYDVVVIGPG-LGQDP---SFKKAVEEVLELDKPVVLDADA--------LNLLTYDKPKREGEVILTPHPGEFKRL 155 (272)
T ss_pred hhhccCCEEEEcCC-CCCCH---HHHHHHHHHHhcCCCEEEEhHH--------HHHHhhcccccCCCEEECCCHHHHHHH
Confidence 34567888888653 22221 2567788888889999999841 111121111123689999999999999
Q ss_pred cCCCCCCh---HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccc
Q 016868 262 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 338 (381)
Q Consensus 262 ~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~ 338 (381)
++....+. .++++++.+. .+.+|++.|..+.++..++..+ +...+....+++|+||++.|.+.+.+.+|.+
T Consensus 156 ~g~~~~~~~~~~~aa~~l~~~-~~~vVv~kG~~~~i~~~~~~~~-~~~~~~~~~~~~GaGD~lag~iaa~la~g~~---- 229 (272)
T TIGR00196 156 LGLVNEIQGDRLEAAQDIAQK-LQAVVVLKGAADVIAAPDGDLW-INKTGNAALAKGGTGDVLAGLIGGLLAQNLD---- 229 (272)
T ss_pred hCCchhhhhhHHHHHHHHHHH-hCCEEEEcCCCCEEEcCCCeEE-EECCCCCccCCCCchHHHHHHHHHHHhCCCC----
Confidence 99754332 3455666664 3458888999998665444444 4455567888999999966655566668988
Q ss_pred hHHHHHHHHHH---HHHHHHHhhhc-CCCCCCCCHHHHHHHHhCC
Q 016868 339 EDQLRDALRFA---NACGALTVMER-GAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 339 ~~~l~~al~~A---~~~Aa~~~~~~-G~~~~~~~~~~v~~~l~~~ 379 (381)
+.+|+..| +..|+..+.+. |.. + .+.+||.+.+.+.
T Consensus 230 ---~~~A~~~a~~~~~~a~~~~~~~~g~~-~-~~~~dl~~~i~~~ 269 (272)
T TIGR00196 230 ---PFDAACNAAFAHGLAGDLALKNHGAY-G-LTALDLIEKIPRV 269 (272)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHHH
Confidence 89999766 77777766444 533 2 5778887776543
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-10 Score=106.85 Aligned_cols=134 Identities=11% Similarity=0.049 Sum_probs=94.4
Q ss_pred eEEEeCCCCCC---CCCC-HHHHHHHHHHHhhhCCEEecCHHHHhhccC-----CCCC--ChHHHHHHHHh-cCCCEEEE
Q 016868 219 VLSYDPNLRLP---LWPS-ADKAREGILSIWETADIIKISEEEISFLTQ-----GEDP--YDDAVVYKLFH-ANLKLLLV 286 (381)
Q Consensus 219 ~v~~D~~~~~~---~~~~-~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~-----~~~~--~~~~~~~~l~~-~g~~~vvv 286 (381)
++++||..... .+.. .+......+.+++.+|+++||..|++.|++ .... +..++++.+.+ +|++.|+|
T Consensus 107 ~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~~G~~~Vli 186 (321)
T PTZ00493 107 LVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYECKVILEALDCQMDLSKANMTELCKLVTEKLNINACLF 186 (321)
T ss_pred eEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHHHHHHHhCCCcccCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 48999953221 1112 122333445699999999999999999998 2211 22456677876 69999999
Q ss_pred EecCCc------e------EEEeC---------------C------ceEEEccccccccCCCCccHHHHHHHHHHHHcCC
Q 016868 287 TEGPDG------C------RYYTK---------------D------FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 287 t~G~~G------~------~~~~~---------------~------~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
|-|... . +++.+ + +.+++..++++..++.|.||+|++++++.|++|.
T Consensus 187 KGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G~ 266 (321)
T PTZ00493 187 KSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGVTYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKKH 266 (321)
T ss_pred CcCCCcccccccccccceeEEecCCccccccccccccccccccccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcCC
Confidence 987632 1 33321 1 1245666666667789999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+ +++|++.|...-..++..
T Consensus 267 ~-------l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 267 N-------ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred C-------HHHHHHHHHHHHHHHHHH
Confidence 9 999999998877766654
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.3e-09 Score=97.57 Aligned_cols=173 Identities=17% Similarity=0.058 Sum_probs=110.3
Q ss_pred ccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--h
Q 016868 170 ADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--T 247 (381)
Q Consensus 170 ~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~ 247 (381)
+-|...++++. +.++.++.++++-- ...+...+.+..+++.+++.++++++||...... . ...+....+++ .
T Consensus 39 p~m~~~~~e~~-~~~~~~~alvi~~G-~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~---~-~~~~~~~~ll~~~~ 112 (263)
T PRK09355 39 PAMAHAPEEAE-EMAKIAGALVINIG-TLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT---S-YRTEFALELLAEVK 112 (263)
T ss_pred cccCCCHHHHH-HHHHhcCceEEeCC-CCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc---h-hhHHHHHHHHHhcC
Confidence 33334444443 45566777776432 3344444456666777888899999999643221 1 11222233343 6
Q ss_pred CCEEecCHHHHhhccCCCCC-----------ChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCC
Q 016868 248 ADIIKISEEEISFLTQGEDP-----------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATG 316 (381)
Q Consensus 248 ~dvl~~N~~E~~~l~~~~~~-----------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttG 316 (381)
+++++||..|+..|++.... +..++++.+.+.+...|++|-+. -++++++..+.++.-.....+.+|
T Consensus 113 ~~vItPN~~E~~~L~g~~~~~~~vd~~~~~~~~~~~a~~la~~~~~~VvvkG~~--d~I~~~~~~~~~~~g~~~~~~v~G 190 (263)
T PRK09355 113 PAVIRGNASEIAALAGEAAETKGVDSTDGSADAVEIAKAAAKKYGTVVVVTGEV--DYITDGERVVSVHNGHPLMTKVTG 190 (263)
T ss_pred CcEecCCHHHHHHHhCCCcccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEECCC--cEEEeCCEEEEEeCCCcccCCccc
Confidence 89999999999999986421 22345567777665678888443 244555555555522223455699
Q ss_pred ccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 016868 317 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 317 AGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
+||++.|.+.+.+..|.+ +.+|+..|...-+.+-
T Consensus 191 tGc~L~~~iaa~lA~g~~-------~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 191 TGCLLSAVVAAFAAVEKD-------YLEAAAAACAVYGIAG 224 (263)
T ss_pred ccHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHH
Confidence 999999999999999998 8888887776655543
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.7e-09 Score=94.68 Aligned_cols=170 Identities=17% Similarity=0.037 Sum_probs=105.5
Q ss_pred ccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCC
Q 016868 172 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TAD 249 (381)
Q Consensus 172 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~d 249 (381)
|...++++. +.+..++.+.+.--.+ .+...+.+..+++.+++.++++++||..... +. ...+....+++ .++
T Consensus 36 m~~~~~e~~-~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~---s~-~r~~~~~~Ll~~~~~~ 109 (249)
T TIGR00694 36 MSEAEEEVA-ELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGA---TK-FRTETALELLSEGRFA 109 (249)
T ss_pred hcCCHHHHH-HHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEccccccc---ch-hHHHHHHHHHhhcCCc
Confidence 334444443 4455666666543223 3333556667777788889999999964322 11 11233345665 479
Q ss_pred EEecCHHHHhhccCCCC-----------CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCcc
Q 016868 250 IIKISEEEISFLTQGED-----------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAG 318 (381)
Q Consensus 250 vl~~N~~E~~~l~~~~~-----------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAG 318 (381)
+++||..|++.|++... .+..++++.+.+.+...|++|-+ .- +++++++.+.+..-+...-..+|.|
T Consensus 110 vITpN~~E~~~L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~~~~VllkG~-~D-~i~~~~~~~~~~~g~~~~~~~~GtG 187 (249)
T TIGR00694 110 AIRGNAGEIASLAGETGLMKGVDSGEGAADAIRAAQQAAQKYGTVVVITGE-VD-YVSDGTSVYTIHNGTELLGKITGSG 187 (249)
T ss_pred eeCCCHHHHHHHhCCCCCCCCcCCccchHHHHHHHHHHHHHhCCEEEEECC-Cc-EEEeCCEEEEECCCChHHhCCccch
Confidence 99999999999998541 11234556776654446777544 32 4555555555433221112247999
Q ss_pred HHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 016868 319 DAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356 (381)
Q Consensus 319 DaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~ 356 (381)
|++.+.+.+.+.+|.+ +.+|+..|...-..+
T Consensus 188 c~LssaIaa~LA~g~~-------~~~A~~~A~~~~~~a 218 (249)
T TIGR00694 188 CLLGSVVAAFCAVEED-------PLDAAISACLLYKIA 218 (249)
T ss_pred HHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHH
Confidence 9999999999999998 888888886444333
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-07 Score=80.39 Aligned_cols=160 Identities=22% Similarity=0.133 Sum_probs=100.2
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCC--CCCCCCCCHHHHHHHHHH-HhhhCCEEecCHHH
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPN--LRLPLWPSADKAREGILS-IWETADIIKISEEE 257 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~--~~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E 257 (381)
.+...+.+..+.+ .+...-..+.++.+..|+.+ ...++||. ...+++.+.+ .....++ +.+.+|+++||..|
T Consensus 78 n~~~Y~~vLTGY~--~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~ee-lipvYr~~i~~ladiiTPNqFE 154 (308)
T KOG2599|consen 78 NLNKYDAVLTGYL--PNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEE-LIPVYRDLIIPLADIITPNQFE 154 (308)
T ss_pred cccccceeeeecc--CChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHH-HHHHHHHhhcchhhhcCCcchh
Confidence 3446676654432 23334455666677666654 55668994 3445555443 3333444 44569999999999
Q ss_pred HhhccCCCCCChHHH---HHHHHhcCCCEEEEEecCC----ceEEE----eC-CceEEEccccccccCCCCccHHHHHHH
Q 016868 258 ISFLTQGEDPYDDAV---VYKLFHANLKLLLVTEGPD----GCRYY----TK-DFSGRVQGLKVEAVDATGAGDAFVAGI 325 (381)
Q Consensus 258 ~~~l~~~~~~~~~~~---~~~l~~~g~~~vvvt~G~~----G~~~~----~~-~~~~~~~~~~v~vvdttGAGDaF~ag~ 325 (381)
++.|+|....+.+++ .+.|+++|++.||||...- |..++ .. .+.+.+..|+++. --+|.||.|+|-+
T Consensus 155 ~EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki~~-~FtGTGDLfsaLL 233 (308)
T KOG2599|consen 155 AEILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKIDG-VFTGTGDLFSALL 233 (308)
T ss_pred hhhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEecccce-EEecccHHHHHHH
Confidence 999999998877654 4678889999999996543 41222 12 2444444444332 2489999999988
Q ss_pred HHHHHcCCccccchHHHHHHHHHHH
Q 016868 326 LSQLSTDFSLLQKEDQLRDALRFAN 350 (381)
Q Consensus 326 l~~l~~g~~~~~~~~~l~~al~~A~ 350 (381)
++.+.+..+ ..++..+++.+.
T Consensus 234 la~~~~~~~----~~~l~~a~e~~l 254 (308)
T KOG2599|consen 234 LAWLHESPD----NDDLSKAVEQVL 254 (308)
T ss_pred HHHHhcCCC----cchHHHHHHHHH
Confidence 888776542 223555555443
|
|
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.7e-06 Score=79.20 Aligned_cols=161 Identities=17% Similarity=0.069 Sum_probs=110.9
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCC---CCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR---LPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~---~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
++++-.+= +.++.....+.+.++. .+-.++++||... .......+...-..++++|.+|++.||..|+-.|++
T Consensus 93 C~VvKTGM--L~~~~I~~vi~q~l~~--~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll~ 168 (523)
T KOG2598|consen 93 CDVVKTGM--LPSPEIVKVIEQSLQK--FNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILLK 168 (523)
T ss_pred ccEEeecC--cCchHHHHHHHHHHHh--hcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHHh
Confidence 55554442 3333223333444443 2334688998421 111222344556777899999999999999999988
Q ss_pred CCC------CC---hHHHHHHHHhcCCCEEEEEecCCce-----------------EEEeCCceEEEccccccccCCCCc
Q 016868 264 GED------PY---DDAVVYKLFHANLKLLLVTEGPDGC-----------------RYYTKDFSGRVQGLKVEAVDATGA 317 (381)
Q Consensus 264 ~~~------~~---~~~~~~~l~~~g~~~vvvt~G~~G~-----------------~~~~~~~~~~~~~~~v~vvdttGA 317 (381)
... .+ .+..++.+.+.|++.|+|+.|.-.. ++|++.+.+.++.+-+.-..+.|.
T Consensus 169 ~~~~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHGt 248 (523)
T KOG2598|consen 169 KEKREISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHGT 248 (523)
T ss_pred hcccCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccCc
Confidence 422 12 2344577888999999999875321 345566778888888888999999
Q ss_pred cHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhh
Q 016868 318 GDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 318 GDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
|.++++++++.|+.|.+ +.+|...|...--.+++
T Consensus 249 gCtLaSAIASnLA~g~s-------l~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 249 GCTLASAIASNLARGYS-------LLQAVQGAIEYVQNAIA 282 (523)
T ss_pred cchHHHHHHHHHhhcCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99999988776555444
|
|
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00011 Score=71.00 Aligned_cols=163 Identities=14% Similarity=0.098 Sum_probs=89.0
Q ss_pred ccCCChHHHHHHHHHHcCCce--EEEeecCCChHHHHHHHHHHHC-CCCCC------Ceee------cCCCCceEEEEEe
Q 016868 90 KAPGGAPANVAVGIARLGGSS--AFIGKVGADEFGYMLADILKEN-NVNGA------GMRF------DPGARTALAFVTL 154 (381)
Q Consensus 90 ~~~GG~~~NvA~~la~LG~~v--~li~~vG~D~~g~~i~~~l~~~-gi~~~------~v~~------~~~~~t~~~~~~~ 154 (381)
.+.||.+..+|..++++|.++ .+...++. ...+.|... +|-.- .+.. .++.++...+++-
T Consensus 99 ~rmGGqAgimAn~la~lg~~~vV~~~p~lsk-----~qa~lf~~~~~i~~P~~e~g~l~l~~p~e~~~~~d~~~IH~I~E 173 (463)
T PRK03979 99 ERMGGQAGIISNLLAILDLKKVIAYTPWLSK-----KQAEMFVDSDNLLYPVVENGKLVLKKPREAYKPNDPLKINRIFE 173 (463)
T ss_pred EEeCChHHHHHHHHHhcCCceEEEeCCCCCH-----HHHHHhCCCCCeeeccccCCceeeccchhhccCCCCcceEEEEE
Confidence 579999999999999999884 44444554 334444221 11110 0000 0122223444443
Q ss_pred cCCCCc--------------eEEEecCCCccccCChhccchhhc----CCccEEEEccccccCch-----h----HHHHH
Q 016868 155 RSDGER--------------EFMFYRNPSADMLLQEAELDLSLI----TKAKIFHYGSISLITEP-----C----KSAHI 207 (381)
Q Consensus 155 ~~~g~~--------------~~~~~~~~~~~~~~~~~~l~~~~i----~~~~~~~~~~~~~~~~~-----~----~~~~~ 207 (381)
.+.|.+ +|+...++........+++. +.+ ..+|.++++|+..+.+. . .+...
T Consensus 174 y~~G~~~~l~~~~~~aPRaNRfI~s~D~~n~~l~~~eef~-~~L~ei~~~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~ 252 (463)
T PRK03979 174 FKKGLEFKLGGEKIIVPRSNRFIVSSRPEWLRIEIKDELK-EFLPEIGKMVDGAILSGYQGIKEEYSDGKTAEYYLKRAK 252 (463)
T ss_pred eCCCCEEEecCccEecCCCCeEEEecCCCCccceecHHHH-HHHHhhccCCCEEEEechhhhhccccccccHHHHHHHHH
Confidence 344432 22222111111111112222 223 45899999999776551 1 12222
Q ss_pred HHHHHH--HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 208 AAAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 208 ~~l~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.++.. +..++++-+.... +.+.+-....+..+++++|.+-+|+.|+..+.
T Consensus 253 ~~i~~L~~~~~~i~iH~E~As----~~~~~ir~~i~~~ilp~vDSlGmNE~ELa~l~ 305 (463)
T PRK03979 253 EDIKLLKKKNKDIKIHVEFAS----IQNREIRKKIITYILPHVDSVGMDETEIANIL 305 (463)
T ss_pred HHHHHHhhCCCCceEEEEecc----ccCHHHHHHHHHhhccccccccCCHHHHHHHH
Confidence 333333 3457888888754 33456666777789999999999999999765
|
|
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00018 Score=69.08 Aligned_cols=163 Identities=13% Similarity=0.133 Sum_probs=90.7
Q ss_pred ccCCChHHHHHHHHHHcCCce--EEEeecCCChHHHHHHHHHHHC-CCCCC------Ceee------cCCCCceEEEEEe
Q 016868 90 KAPGGAPANVAVGIARLGGSS--AFIGKVGADEFGYMLADILKEN-NVNGA------GMRF------DPGARTALAFVTL 154 (381)
Q Consensus 90 ~~~GG~~~NvA~~la~LG~~v--~li~~vG~D~~g~~i~~~l~~~-gi~~~------~v~~------~~~~~t~~~~~~~ 154 (381)
.+.||.+..+|..++++|.++ .+...++. ...+.|.+. +|-.- .+.. .++.++...+++-
T Consensus 86 ~rmGGqAgimAn~la~lg~~~vI~~~~~ls~-----~qa~lf~~~~ni~~p~~e~g~l~l~~~~e~~~e~d~~~IH~I~E 160 (446)
T TIGR02045 86 ERMGGQAGIISNLLGRLGLKKVIAYTPFLSK-----RQAEMFVATGNILYPVVENGKLVLKPPGEAYREGDPSKVNRIFE 160 (446)
T ss_pred eeeCCHHHHHHHHHHhcCCceEEEeCCCCCH-----HHHHHhCCcCceeeccccCCceeeccchhccCCCCCCceEEEEE
Confidence 579999999999999999885 33444443 334444443 11100 0000 0122222444433
Q ss_pred cCCCCc--------------eEEEecCCCccccC-Chhccc---hhhcCCccEEEEccccccCch---------hHHHHH
Q 016868 155 RSDGER--------------EFMFYRNPSADMLL-QEAELD---LSLITKAKIFHYGSISLITEP---------CKSAHI 207 (381)
Q Consensus 155 ~~~g~~--------------~~~~~~~~~~~~~~-~~~~l~---~~~i~~~~~~~~~~~~~~~~~---------~~~~~~ 207 (381)
.+.|.+ +|+...++. +..+ ..+++. .+.-..+|.++++|+..+.+. ..+...
T Consensus 161 y~~G~~~~lg~~~~~aPRaNRfI~s~D~~-n~~l~~~~~l~~~~~~i~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~ 239 (446)
T TIGR02045 161 FRKGTNFKLGGETIKVPRSGRFIVSSRPE-SLRIETKDQLRKFLPEIGEPVDGAILSGYQGIKEEYSDGKTAKYYLERAK 239 (446)
T ss_pred eCCCCeeecCCceEeccCCCeEEEecCCc-cccceecHHHHHhhhhhhhcccEEEEEchhhhhhhccCCccHhHHHHHHH
Confidence 333332 222221111 1111 111111 233356899999999776542 122333
Q ss_pred HHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 208 AAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 208 ~~l~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.++..++ .++++-+.... +.+.+-....+..+++.+|.+-+|+.|+..++
T Consensus 240 ~~i~~L~~~~~i~iH~E~As----~~~~~l~~~i~~~ilp~vDSlGMNE~ELa~ll 291 (446)
T TIGR02045 240 EDIELLKKNKDLKIHVEFAS----IQNREIRKKVVTNIFPHVDSVGMDEAEIANVL 291 (446)
T ss_pred HHHHHHhhCCCCeEEEEecc----cccHHHHHHHHHhhccccccccCCHHHHHHHH
Confidence 44444433 67888888754 33456667777789999999999999999877
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00041 Score=66.79 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=125.7
Q ss_pred cccCCChHHHHHHHHHHcCCceEE-EeecCCChHHHHHHHHHHHCCCCCCCe-----eec-------CCCCceEEEEEec
Q 016868 89 KKAPGGAPANVAVGIARLGGSSAF-IGKVGADEFGYMLADILKENNVNGAGM-----RFD-------PGARTALAFVTLR 155 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~v-----~~~-------~~~~t~~~~~~~~ 155 (381)
..+.||.+..+|..++++|.++.+ .+..- ++...+.|...+|-.-.+ ... .+.+....+++-.
T Consensus 87 ~~rmGGnAgimAn~la~lg~~~Vi~~~~~l----sk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~d~IH~IfEy 162 (453)
T PRK14039 87 EIRMGGNAGIMANVLSELGASRVVPNVAVP----SKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQEPIHFVFDF 162 (453)
T ss_pred eEEeCChHHHHHHHHHhcCCceEEEcCCCC----CHHHHHhcCCCCEEeccccccccccCccccccccCCCCCceEEEEe
Confidence 578999999999999999999654 33222 233444442222211100 000 0112333333333
Q ss_pred CCCCc--------------eEEE-ecCCCccccCChhccc---hhhcCCccEEEEccccccCch------hHHHHH---H
Q 016868 156 SDGER--------------EFMF-YRNPSADMLLQEAELD---LSLITKAKIFHYGSISLITEP------CKSAHI---A 208 (381)
Q Consensus 156 ~~g~~--------------~~~~-~~~~~~~~~~~~~~l~---~~~i~~~~~~~~~~~~~~~~~------~~~~~~---~ 208 (381)
+.|++ +|+. .+..+.... ..+++. .+...++|.++++|+.++.+. -.+... +
T Consensus 163 ~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~-i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~e~l~~~~~ 241 (453)
T PRK14039 163 REGETFSLYGTRIRAPRENRFIATFDHLNFRLF-INPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYREKLEDSLA 241 (453)
T ss_pred CCCCEEecCCccEecCCCCeEEEecCCCCccce-ecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHHHHHHHHHH
Confidence 33332 2222 211111111 122222 123347899999999776331 122222 3
Q ss_pred HHHHH--HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC--------ChH---HHHHH
Q 016868 209 AAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--------YDD---AVVYK 275 (381)
Q Consensus 209 ~l~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~--------~~~---~~~~~ 275 (381)
.++.. +..++++-+.... +.+.+-....+..+++++|.+-+|+.|+..+...-.. +.+ +++..
T Consensus 242 ~i~~l~~~~~~i~iH~E~As----~~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g~~~~~i~~~~~~~v~ea~~~ 317 (453)
T PRK14039 242 QLKWWKSKNEKLRIHAELGH----FASKEIANSVFLILAGIVDSIGMNEDELAMLANLHGIPAEGILEMNAEAIGEAACQ 317 (453)
T ss_pred HHHHHHhcCCCceEEEEecC----cccHHHHHHHHHHhhcccccccCCHHHHHHHHHHcccchhhHhhcCHHHHHHHHHH
Confidence 33333 2345788888764 3456667777878999999999999999988765221 111 33344
Q ss_pred HH-hcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 016868 276 LF-HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 276 l~-~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
|+ +.|++.++|..- +-+++-.. . |. -+.+ +.+ +||.+|+.+||
T Consensus 318 l~~~~~le~l~vHT~--~y~l~i~~-------~-----~~--------------~~~~-------~~~-~aL~fg~~~Aa 361 (453)
T PRK14039 318 LASESGLQRLIIHTR--EFVLCVSK-------P-----DV--------------KMAK-------KKI-EAMEFGLKCAG 361 (453)
T ss_pred HHHHcCCCEEEEEec--ceEEEEec-------C-----CC--------------CccH-------HHH-HHHHHHHHHHH
Confidence 44 468877666432 21111111 0 00 1112 226 99999998888
Q ss_pred HHhhhcCCCCCCCCHHHHH
Q 016868 355 LTVMERGAIPALPTREAVL 373 (381)
Q Consensus 355 ~~~~~~G~~~~~~~~~~v~ 373 (381)
..... | .+.++++++
T Consensus 362 ~~A~~-G---~i~~~~~~~ 376 (453)
T PRK14039 362 VYAAS-G---SLDGREFVE 376 (453)
T ss_pred HHHhc-C---CCCChHHHH
Confidence 77654 4 345677776
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0013 Score=58.64 Aligned_cols=146 Identities=18% Similarity=0.096 Sum_probs=87.2
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh--hhCCEEecCHHHHh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEIS 259 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~ 259 (381)
+..+.++.+++.--. +++...+.+..+.+.+++.++|+++||..-.. .....+...+++ .++++++.|..|..
T Consensus 45 e~~~~a~al~iNiGT-l~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa----s~~R~~~~~~LL~~~~~~vIrGN~sEI~ 119 (246)
T PF02110_consen 45 EFASIADALVINIGT-LTDERIEAMKKAAKAANELGIPVVLDPVGVGA----SKFRTEFALELLNNYKPTVIRGNASEIA 119 (246)
T ss_dssp HHHHCTSEEEEESTT-SSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT----BHHHHHHHHHHHCHS--SEEEEEHHHHH
T ss_pred HHHHHcCEEEEECCC-CCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC----cHHHHHHHHHHHHhCCCcEEEeCHHHHH
Confidence 444556666554222 23445677788899999999999999964322 234455666777 47999999999999
Q ss_pred hccCCCCC---------Ch--HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 260 FLTQGEDP---------YD--DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 260 ~l~~~~~~---------~~--~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
.|.+.... +. .+.++.+.++.- .+|+-.|+.-. +.++.+.+.++--.--.-.-||.|+...+-+.+.
T Consensus 120 aLag~~~~~kGVDs~~~~~~~~~~a~~lA~k~~-~vVvvTG~~D~-Isdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf 197 (246)
T PF02110_consen 120 ALAGEDSKAKGVDSGDSDEDAIEAAKQLAQKYN-CVVVVTGEVDY-ISDGNRVYRIPNGSPLLSKITGTGCMLGALIAAF 197 (246)
T ss_dssp HHHTCCCCSCSSSSSCGSHHHHHHHHHHHHHTT-SEEEEESSSEE-EEESSCEEEECSSSGGGGGSTTHHHHHHHHHHHH
T ss_pred HHhCcCCCCCCcCcCCcchHHHHHHHHHHHhcC-CEEEEecCCcE-EECCCeEEEeCCCChHhcceeccchHHHHHHHHH
Confidence 99876431 11 244566655433 35555565543 3444455554433323445599999987777766
Q ss_pred HHcCCc
Q 016868 329 LSTDFS 334 (381)
Q Consensus 329 l~~g~~ 334 (381)
+....+
T Consensus 198 ~av~~d 203 (246)
T PF02110_consen 198 LAVAED 203 (246)
T ss_dssp HCCCSS
T ss_pred Hhcccc
Confidence 666555
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00063 Score=67.72 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=88.0
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHH--hhhCCEEecCHHHHhhc
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI--WETADIIKISEEEISFL 261 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~--l~~~dvl~~N~~E~~~l 261 (381)
++.++.+.++.-...++ ....+++.+++.+.++++|+.. ...+... .....||+||..|+..|
T Consensus 318 ~~~~~a~viGpGlg~~~----~~~~~~~~~~~~~~P~VLDAda-----------L~ll~~~~~~~~~~VLTPh~gE~~rL 382 (508)
T PRK10565 318 LEWADVVVIGPGLGQQE----WGKKALQKVENFRKPMLWDADA-----------LNLLAINPDKRHNRVITPHPGEAARL 382 (508)
T ss_pred hhcCCEEEEeCCCCCCH----HHHHHHHHHHhcCCCEEEEchH-----------HHHHhhCccccCCeEECCCHHHHHHH
Confidence 45677777764322222 2234456667778999999842 1111110 11246999999999999
Q ss_pred cCCCCCC----hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcccc
Q 016868 262 TQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 337 (381)
Q Consensus 262 ~~~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~ 337 (381)
++..... ..+.++.+.+..-..|++ .|..- ++.+.++..++....-...-+.|.||+++|.+.+-+.++.+
T Consensus 383 ~~~~~~~v~~~~~~~a~~~a~~~~~~vvl-KG~~~-iI~~~~~~~~~~~~G~~~ma~~GsGDvLaGiIaalla~g~~--- 457 (508)
T PRK10565 383 LGCSVAEIESDRLLSARRLVKRYGGVVVL-KGAGT-VIAAEPDALAIIDVGNAGMASGGMGDVLSGIIGALLGQKLS--- 457 (508)
T ss_pred hCCChhhhhhhHHHHHHHHHHHhCCEEEE-eCCCc-EEEcCCceEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC---
Confidence 9854322 123445555543334444 55433 45554334444443345566799999999988888888888
Q ss_pred chHHHHHHHHHHHHH
Q 016868 338 KEDQLRDALRFANAC 352 (381)
Q Consensus 338 ~~~~l~~al~~A~~~ 352 (381)
+.+|+..|+..
T Consensus 458 ----~~~Aa~~a~~l 468 (508)
T PRK10565 458 ----PYDAACAGCVA 468 (508)
T ss_pred ----HHHHHHHHHHH
Confidence 77888777644
|
|
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0017 Score=62.55 Aligned_cols=236 Identities=17% Similarity=0.186 Sum_probs=127.0
Q ss_pred cccCCChHHHHHHHHHH-cCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeec-----------CCCCceEEEEEecC
Q 016868 89 KKAPGGAPANVAVGIAR-LGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFD-----------PGARTALAFVTLRS 156 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~-LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~-----------~~~~t~~~~~~~~~ 156 (381)
..+.||.+..+|..++. .|.+| +..++.. .+.-.+.+...+|-.-.+.-. .+.+.-+-+++-.+
T Consensus 106 ~~rmGGnAgimAn~la~~~g~~V--ia~~~~l--sk~qa~lf~~~~I~~p~~~~~~l~l~~p~e~~~~~~d~IH~I~Ey~ 181 (453)
T PRK14038 106 ELRMGGQVGIMANLLGGVYGVPV--IAHVPQL--SKLQASLFLDGPIYVPTFEGGELKLVHPREFVGDEENCIHYIYEFP 181 (453)
T ss_pred eEEeCChHHHHHHHHHhhcCCce--EEECCCc--chhhHhhccCCCEEeccccCCcceeccchhcccCCCCccEEEEEeC
Confidence 47899999999999984 56776 6666632 222222222222211000000 01123333343334
Q ss_pred CCCc----------eEEEecC-CCccccCChhccc---hhhcCCccEEEEccccccCchhHHH-H---HHHHHHHHHCCC
Q 016868 157 DGER----------EFMFYRN-PSADMLLQEAELD---LSLITKAKIFHYGSISLITEPCKSA-H---IAAAKAAKDAGV 218 (381)
Q Consensus 157 ~g~~----------~~~~~~~-~~~~~~~~~~~l~---~~~i~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~a~~~g~ 218 (381)
.|++ +|+...+ .+.... ..+++. .+...+.|.++++|+..+.+...+. . .+.++..+..++
T Consensus 182 ~G~~~~~~~aPRaNRfI~s~D~~N~~l~-~~eef~~~l~ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i 260 (453)
T PRK14038 182 RGFRVFDFEAPRENRFIGAADDYNPNLY-IRPEFRERFEEIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGI 260 (453)
T ss_pred CCCEEeeeEcCCCceEEEecCCCCccee-ecHHHHHHHHhhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCc
Confidence 4442 3333222 111111 122222 1344679999999998765433222 2 222333344578
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC-------------ChH---HHHHHHHh-cCC
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-------------YDD---AVVYKLFH-ANL 281 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~-------------~~~---~~~~~l~~-~g~ 281 (381)
++-+..... .+ ...+..+..+++.+|-+-+|+.|+..+...-.. ... +++..|++ .|+
T Consensus 261 ~iH~EfAs~----~d-~~~r~~i~~ilp~vDSlGmNE~ELa~ll~~lg~~~l~~~i~~~~~~~~~~v~e~~~~L~~~~gl 335 (453)
T PRK14038 261 PAHLEFAFT----PD-ETVREEILGLLGKFYSVGLNEVELASIMEVMGEKTLAEKLLAKDPVDPIAVTEAMLKLAEKTGV 335 (453)
T ss_pred eEEEEeecc----ch-HHHHHHHHhhCccccccccCHHHHHHHHHHhccchhhhhhhhcCccCHHHHHHHHHHHHHHcCC
Confidence 888887632 22 345666667999999999999999988741111 122 33345543 677
Q ss_pred CEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 282 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 282 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
+.+.|.. .+-+++-.+. ++.. +++||.+|+.+||.... .|
T Consensus 336 eri~vHT--~~y~l~i~~~------------------------------~~~~-------~~~aL~f~~~~AaarA~-~G 375 (453)
T PRK14038 336 KRIHFHT--YGYYLALTKY------------------------------RGEH-------VRDALLFAALAAAAKAM-LG 375 (453)
T ss_pred CEEEEEe--cceeEEEecC------------------------------CHHH-------HHHHHHHHHHHHHHHHH-cC
Confidence 7655532 1222211110 3334 99999999999998875 56
Q ss_pred CCCCCCCHHHHHHHHh
Q 016868 362 AIPALPTREAVLNAIH 377 (381)
Q Consensus 362 ~~~~~~~~~~v~~~l~ 377 (381)
. +.++++++.-++
T Consensus 376 ~---i~~~~d~~~~l~ 388 (453)
T PRK14038 376 N---IEKIDDVRKALD 388 (453)
T ss_pred C---CCCHHHHHHHhc
Confidence 4 357777776543
|
|
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0012 Score=64.45 Aligned_cols=163 Identities=14% Similarity=0.197 Sum_probs=82.6
Q ss_pred cCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCCCe--------e----ecCCCCceEEEEEecCC
Q 016868 91 APGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGAGM--------R----FDPGARTALAFVTLRSD 157 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v--------~----~~~~~~t~~~~~~~~~~ 157 (381)
+.||.+.-+|..|+.++. +|.+.+.++. +.+.+.| ..+|-+=.+ . ..++.+.-.-+++-.+.
T Consensus 93 r~GGnA~imAn~la~l~~~~Vil~~p~~s----k~~~~l~-~~~i~~P~v~~~~~~l~~~~~a~~~~~~~~iH~IlEy~~ 167 (444)
T PF04587_consen 93 RMGGNAGIMANRLANLEGCPVILYAPILS----KEQAELF-NDNIYVPVVENGELKLIHPREAFKEDDEDDIHLILEYKK 167 (444)
T ss_dssp EEESHHHHHHHHHCCTT-SEEEEE-SS------HHHHTTS-SSSEEEEEEETTEEEEEEGGGS-STT----EEEEEEE-T
T ss_pred ccCchHHHHHHHHHhCCCCEEEEecCcCC----HHHHHhc-ccCcccccccCCcccccCchhccccCCccceEEEEEcCC
Confidence 599999999999997754 5555554654 3444555 232210000 0 00112344444544444
Q ss_pred CC----------ceEEE-ecCCCccccCChhccc---hhhcCCccEEEEccccccCc-----hhH----HHHHHHHHHHH
Q 016868 158 GE----------REFMF-YRNPSADMLLQEAELD---LSLITKAKIFHYGSISLITE-----PCK----SAHIAAAKAAK 214 (381)
Q Consensus 158 g~----------~~~~~-~~~~~~~~~~~~~~l~---~~~i~~~~~~~~~~~~~~~~-----~~~----~~~~~~l~~a~ 214 (381)
|+ .+|+. .+..+.... ..+.+. .+...++|.++++|+.++.+ ..+ +...+.++..+
T Consensus 168 G~~~~~~~aPraNRfI~s~D~~N~~l~-~~e~f~~~l~~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~ 246 (444)
T PF04587_consen 168 GEKWGDITAPRANRFIVSSDPYNPRLS-ILEEFFEALEEIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLK 246 (444)
T ss_dssp TEEETTEE-SS-EEEEEEE-SSGGGTS---HHHHHSHHHHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH
T ss_pred CCeecceecCcCceEEEecCCCCcccc-chHHHHHHHHhhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhcc
Confidence 43 23333 222222221 222222 13345699999999987663 112 22223334455
Q ss_pred -HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 215 -DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 215 -~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
..+++|-+.... +.+.+-.+..+..+++++|.+-+|+.|+..++.
T Consensus 247 ~~~~~~iH~E~As----~~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~ 292 (444)
T PF04587_consen 247 SNPDIPIHLELAS----FADEELRKEILEKILPHVDSLGMNEQELANLLS 292 (444)
T ss_dssp -HTT-EEEEE--------SSHHHHHHHHHHHGGGSSEEEEEHHHHHHHHH
T ss_pred CCCCCceEEEecc----ccCHHHHHHHHHHhhccccccccCHHHHHHHHH
Confidence 688999998864 345566777777899999999999999998754
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0039 Score=55.91 Aligned_cols=167 Identities=13% Similarity=0.029 Sum_probs=98.4
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHH---HhhhCCEEecCHHHH
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS---IWETADIIKISEEEI 258 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~---~l~~~dvl~~N~~E~ 258 (381)
+.++++|.+.++.-.-..+ ...++++...+...++++|-. .-..+.. .....-|++|+..|+
T Consensus 63 ~~~~~~~av~iGPGlg~~~----~~~~~~~~~~~~~~p~VlDAD-----------aL~~l~~~~~~~~~~~IlTPH~gE~ 127 (242)
T PF01256_consen 63 ELLEKADAVVIGPGLGRDE----ETEELLEELLESDKPLVLDAD-----------ALNLLAENPKKRNAPVILTPHPGEF 127 (242)
T ss_dssp HHHCH-SEEEE-TT-SSSH----HHHHHHHHHHHHCSTEEEECH-----------HHHCHHHCCCCSSSCEEEE-BHHHH
T ss_pred hhhccCCEEEeecCCCCch----hhHHHHHHHHhhcceEEEehH-----------HHHHHHhccccCCCCEEECCCHHHH
Confidence 4567889988875322222 122344445555778999973 1222222 234567899999999
Q ss_pred hhccCCCC---CChHHHHHHHHh-cCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCc
Q 016868 259 SFLTQGED---PYDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 259 ~~l~~~~~---~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
..|++... .+..+.++++.+ +++ +||-.|..-.+...+++.+..+. .-.-.-+-|.||.++|-+..-+.++.+
T Consensus 128 ~rL~~~~~~~~~~~~~~a~~~a~~~~~--~vvLKG~~t~I~~p~~~~~~n~~-gn~~la~gGsGDvLaGii~~llaq~~~ 204 (242)
T PF01256_consen 128 ARLLGKSVEIQEDRIEAAREFAKEYGA--VVVLKGAVTIIASPGGRVYVNPT-GNPGLATGGSGDVLAGIIAGLLAQGYD 204 (242)
T ss_dssp HHHHTTTCHHCCSHHHHHHHHHHHHTS--EEEEESTSSEEEEETSEEEEE-----GGGSSTTHHHHHHHHHHHHHHHTSS
T ss_pred HHHhCCcccchhhHHHHHHHHHhhcCc--EEEEeCCCcEEEecCcceeEeCC-CCCCCCCCCcccHHHHHHHHHHHccCC
Confidence 99999876 233455666654 443 56666766655554555444433 335667899999999888888899998
Q ss_pred cccchHHHHHHHHHHHHHHHHH----hhhcCCCCCCCCHHHHHHHH
Q 016868 335 LLQKEDQLRDALRFANACGALT----VMERGAIPALPTREAVLNAI 376 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~----~~~~G~~~~~~~~~~v~~~l 376 (381)
+.+|+..|+..=+.+ .+..|. + ....+|-+.+
T Consensus 205 -------~~~Aa~~av~lHg~Ag~~~~~~~~~--~-~~a~dli~~i 240 (242)
T PF01256_consen 205 -------PFEAACLAVYLHGRAGDLAAEKYGR--G-MLASDLIDNI 240 (242)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHCTTCSS--C---HHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhCCC--c-CcHHHHHHhc
Confidence 888888776543333 333333 2 3566665554
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.056 Score=48.00 Aligned_cols=158 Identities=16% Similarity=0.053 Sum_probs=92.0
Q ss_pred CccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh-
Q 016868 169 SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET- 247 (381)
Q Consensus 169 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~- 247 (381)
+.-|...++++. +..+-++.+.+.--+ +++...+.+..+.+.+++.+.|+++||..... .....+...++|.+
T Consensus 39 SP~Ma~~~eE~~-e~~kia~AL~INIGT-L~~~~~~~m~~A~~~An~~~~PvvLDPVgvgA----t~~R~~~~~~LL~~~ 112 (265)
T COG2145 39 SPVMADAPEEVE-EFAKIADALLINIGT-LSAERIQAMRAAIKAANESGKPVVLDPVGVGA----TKFRTKFALELLAEV 112 (265)
T ss_pred CchhccCHHHHH-HHHHhccceEEeecc-CChHHHHHHHHHHHHHHhcCCCEEecCccCCc----hHHHHHHHHHHHHhc
Confidence 333444454443 344444555443222 24555678888899999999999999954322 22334555566654
Q ss_pred -CCEEecCHHHHhhccCCCCC--------ChH---HHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCC
Q 016868 248 -ADIIKISEEEISFLTQGEDP--------YDD---AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDAT 315 (381)
Q Consensus 248 -~dvl~~N~~E~~~l~~~~~~--------~~~---~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdtt 315 (381)
.++++.|..|...|.|.... ... ++++.+.+. ...+++-.|+.-. +.++.+.+.+.--.--.-.-|
T Consensus 113 ~~~~IrGN~sEI~~Lag~~~~~kGVDa~~~~~~~~~~a~~~A~~-~~~vvvvTG~vD~-Isdg~~~~~i~nG~pll~~It 190 (265)
T COG2145 113 KPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKAAQK-YGTVVVVTGEVDY-ISDGTRVVVIHNGSPLLGKIT 190 (265)
T ss_pred CCcEEeccHHHHHHHhcccccccccccccchhhHHHHHHHHHHH-hCcEEEEECCeeE-EEcCCeEEEEECCCcHHhhhh
Confidence 69999999999999864321 112 223333332 2246666665543 444444444433222234559
Q ss_pred CccHHHHHHHHHHHHcCCc
Q 016868 316 GAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 316 GAGDaF~ag~l~~l~~g~~ 334 (381)
|+|+...|...+.+....+
T Consensus 191 GtGCllgav~aaF~av~~d 209 (265)
T COG2145 191 GTGCLLGAVVAAFLAVEKD 209 (265)
T ss_pred ccccHHHHHHHHHHhcCCC
Confidence 9999887776666665554
|
|
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0036 Score=55.06 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=91.1
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 181 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 181 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
+..+.+-..++++.-.--++.....+..+++.++++++|+++|... +|--.+.....+.. . ..-|++||.-|++.
T Consensus 96 ~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDG---L~Lv~q~~e~l~~~-~-~~viLTPNvvEFkR 170 (306)
T KOG3974|consen 96 EKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADG---LWLVEQLPERLIGG-Y-PKVILTPNVVEFKR 170 (306)
T ss_pred HHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCc---eEehhhchhhhhcc-C-ceeeeCCcHHHHHH
Confidence 3467777888887543345556677789999999999999999852 44322111111111 1 13678999999999
Q ss_pred ccCCC--CCChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHH
Q 016868 261 LTQGE--DPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL 329 (381)
Q Consensus 261 l~~~~--~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l 329 (381)
|++.. ..+.......|.+.-....+|-.|+.-.++..+.+....+. +-...-.-|=||.++|.+..-+
T Consensus 171 Lcd~~l~~~d~~~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~fl 240 (306)
T KOG3974|consen 171 LCDAELDKVDSHSQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLATFL 240 (306)
T ss_pred HHHHhhccccchHHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHHHH
Confidence 99873 33333444555543345678888888776655555544443 3334455788999988776444
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0034 Score=60.97 Aligned_cols=165 Identities=12% Similarity=0.153 Sum_probs=94.5
Q ss_pred cccCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCC--------
Q 016868 89 KKAPGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE-------- 159 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~-------- 159 (381)
..+.||.+.-+|..++++|. +|.+.+.+... .....+...+|-.-... ....+.-+-+++-.+.|+
T Consensus 102 ~~~mGGnAgimAn~la~~g~~~Vil~~p~~~k----~~~~L~~d~~i~~p~~e-~~~~~d~IHlIlEy~~G~~~~~~~aP 176 (445)
T cd01938 102 ELRMGGNAGLMANRLAGEGDLKVLLGVPQSSK----LQAELFLDGPIVVPTFE-NLIEEDEIHLILEYPRGESWGDFVAP 176 (445)
T ss_pred eEEeCChHHHHHHHHHhcCCceEEEecCCCcH----HHHHhCCCCCeeecccc-cCCCCCccEEEEEcCCCCEecceEcC
Confidence 57899999999999999999 88888776543 22222222122111000 001223344444344444
Q ss_pred --ceEEEecCCCccccCChhccchhhcCC-ccEEEEccccccCchh--HHHHHHHHHHHH------HCCCeEEEeCCCCC
Q 016868 160 --REFMFYRNPSADMLLQEAELDLSLITK-AKIFHYGSISLITEPC--KSAHIAAAKAAK------DAGVVLSYDPNLRL 228 (381)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~--~~~~~~~l~~a~------~~g~~v~~D~~~~~ 228 (381)
.+|+...+..-. ....+++..+..+. .|.++++|+.++.+.. .....+.++.++ +..+++-|....
T Consensus 177 raNRfI~~~d~~n~-l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~As-- 253 (445)
T cd01938 177 RANRFIFHDDDNNP-MLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIHLELAS-- 253 (445)
T ss_pred CCCeEEEecCCcch-hhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEEEEecc--
Confidence 233333222111 22222222344444 8999999998765532 222333333333 234777777753
Q ss_pred CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 229 PLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
+.+.+-..+.+..+++++|-+-+|+.|+..++.
T Consensus 254 --~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~~ 286 (445)
T cd01938 254 --TVDEELREEILHEVVPYVDSLGLNEQELANLLQ 286 (445)
T ss_pred --cccHHHHHHHHHHhcccccccccCHHHHHHHHH
Confidence 345666777777899999999999999998873
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.038 Score=50.56 Aligned_cols=174 Identities=14% Similarity=0.045 Sum_probs=90.5
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhc
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFL 261 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l 261 (381)
..+++|.+.++.-.-.++...+...++++... .++++|...- ........+.. .-.|++|+..|++.|
T Consensus 98 ~~~~~~avviGpGlG~~~~~~~~~~~~l~~~~---~p~ViDADaL--------~~la~~~~~~~~~~~VlTPH~gEf~rL 166 (284)
T COG0063 98 LVERADAVVIGPGLGRDAEGQEALKELLSSDL---KPLVLDADAL--------NLLAELPDLLDERKVVLTPHPGEFARL 166 (284)
T ss_pred hhccCCEEEECCCCCCCHHHHHHHHHHHhccC---CCEEEeCcHH--------HHHHhCcccccCCcEEECCCHHHHHHh
Confidence 34678888887432233333344444433322 8999998410 00011111221 237889999999999
Q ss_pred cCCCCCC----hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcccc
Q 016868 262 TQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 337 (381)
Q Consensus 262 ~~~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~ 337 (381)
++...++ ..+.++.+.++ ...+||=.|..-.+ .+.+...++...--.-.=+=|.||++++-+.+-+.++ . .
T Consensus 167 ~g~~~~~~~~~r~~~a~~~a~~-~~~vvVLKG~~tvI-~~~~g~~~~n~~G~~~ma~GGtGDvLaGii~alLAq~-~-~- 241 (284)
T COG0063 167 LGTEVDEIEVDRLEAARELAAK-YGAVVVLKGAVTVI-ADPDGEVFVNPTGNPGMATGGTGDVLAGIIGALLAQG-P-A- 241 (284)
T ss_pred cCCcccccccchHHHHHHHHHH-cCCEEEEeCCCCEE-EcCCCcEEEcCCCCHHhccCcchHHHHHHHHHHHhCC-C-C-
Confidence 9854432 23455555543 33466666755444 4333233333222233445689999877666655666 3 0
Q ss_pred chHHHHHHHHHHHHH---HH-HHhhhcCCCCCCCCHHHHHHHHhCC
Q 016868 338 KEDQLRDALRFANAC---GA-LTVMERGAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 338 ~~~~l~~al~~A~~~---Aa-~~~~~~G~~~~~~~~~~v~~~l~~~ 379 (381)
+..+|+..|+.. |+ +.-...| -.+..++-+.+.++
T Consensus 242 ---~~~~Aa~~g~~~h~~ag~la~~~~g----~~~a~Dl~~~ip~~ 280 (284)
T COG0063 242 ---DPLEAAAAGAWLHGRAGELAAKKHG----GLTATDLIEAIPRA 280 (284)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhhccC----CCCHHHHHHHHHHH
Confidence 255555554433 22 2233333 24666666655443
|
|
| >COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.83 E-value=8.5 Score=36.49 Aligned_cols=81 Identities=11% Similarity=0.029 Sum_probs=53.9
Q ss_pred hhcCCccEEEEccccccCch----h-----HHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEE
Q 016868 182 SLITKAKIFHYGSISLITEP----C-----KSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 251 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~----~-----~~~~~~~l~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl 251 (381)
+.....|...++|+..+.+- + -+...+-++..++ .++++=+..... .+....+..+..+++.++-+
T Consensus 221 ~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~----~d~~irk~i~~~il~~v~Sv 296 (466)
T COG4809 221 EIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASI----QDRKIRKEILTNILSIVYSV 296 (466)
T ss_pred HHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEeccc----ccHHHHHHHHHHHHhhhhhc
Confidence 34456788888888653211 1 1222333455555 678888887542 34556667777799999999
Q ss_pred ecCHHHHhhccCCCC
Q 016868 252 KISEEEISFLTQGED 266 (381)
Q Consensus 252 ~~N~~E~~~l~~~~~ 266 (381)
-+|+.|+..+...-.
T Consensus 297 GldE~ElA~vl~vlG 311 (466)
T COG4809 297 GLDEVELANVLNVLG 311 (466)
T ss_pred CCCHHHHHHHHHhhC
Confidence 999999998776543
|
|
| >KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.46 Score=43.93 Aligned_cols=162 Identities=14% Similarity=0.196 Sum_probs=86.5
Q ss_pred CccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEec
Q 016868 87 AFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR 166 (381)
Q Consensus 87 ~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~ 166 (381)
++.++.||++.-.|.-...-| .+.++|..|.-...-.+-.. +.+.+-.+.. .-+.+++-.+.|+.- ..|-
T Consensus 137 R~~~~mGGNA~LMA~R~~~~~-~~~LlG~~~~R~~~~L~P~~-----~R~~~~~I~~---DdiHlILEYK~Gd~~-G~~V 206 (478)
T KOG4184|consen 137 RINWYMGGNAPLMAVRFFMEG-AQVLLGAHMSRKLRPLLPKE-----IRLAGDEIPN---DDIHLILEYKAGDKW-GPYV 206 (478)
T ss_pred hhhhhccCCchHHHHHHHhcc-ceeeecccccchhccccchh-----hhcccCcCcC---CceEEEEEeccCCcc-cccc
Confidence 456889999988888887776 78899998875322221111 2221111111 113333333444421 0011
Q ss_pred CCCcccc------CCh-----hccchhhcC--CccEEEEccccccCchhHHHHHHHHHHHHH------CCCeEEEeCCCC
Q 016868 167 NPSADML------LQE-----AELDLSLIT--KAKIFHYGSISLITEPCKSAHIAAAKAAKD------AGVVLSYDPNLR 227 (381)
Q Consensus 167 ~~~~~~~------~~~-----~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~------~g~~v~~D~~~~ 227 (381)
.+.++.. ..+ +.+ .+.++ +.|+++++|..++.-...+.-.+-++..++ .|+++=++...
T Consensus 207 AP~anR~I~~~D~~n~~m~~~E~f-~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~HlElaS- 284 (478)
T KOG4184|consen 207 APRANRYILHNDRNNPHMRAVEQF-TDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVHLELAS- 284 (478)
T ss_pred cccccceeeecCCCChHHHHHHHH-HHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchhhhHhH-
Confidence 1111111 111 111 12232 468999999877655444433333333332 35555555431
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 228 LPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
+.+.+-..+.+..++|++|-+-+|+.|+..|+.
T Consensus 285 ---~~~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q 317 (478)
T KOG4184|consen 285 ---MTNRELMSSIVHQVLPYVDSLGLNEQELLFLTQ 317 (478)
T ss_pred ---HHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence 223344556666789999999999999998874
|
|
| >PRK10076 pyruvate formate lyase II activase; Provisional | Back alignment and domain information |
|---|
Probab=89.14 E-value=3.5 Score=36.21 Aligned_cols=75 Identities=9% Similarity=0.033 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEe-----cCHHHHhhccCCCCCChHHHHHHHH
Q 016868 203 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-----ISEEEISFLTQGEDPYDDAVVYKLF 277 (381)
Q Consensus 203 ~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~-----~N~~E~~~l~~~~~~~~~~~~~~l~ 277 (381)
.+.+.++++.+++.|+.+.+|.+...+ .+.+.++++.+|.+. ++.+.-+.++|......-+.++.+.
T Consensus 53 ~~fl~~l~~~~k~~gi~~~leTnG~~~--------~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~ 124 (213)
T PRK10076 53 AEFATRFLQRLRLWGVSCAIETAGDAP--------ASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLV 124 (213)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC--------HHHHHHHHHhcCEEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 566789999999999999999975432 344556677777664 4666677888866543334556677
Q ss_pred hcCCCEEE
Q 016868 278 HANLKLLL 285 (381)
Q Consensus 278 ~~g~~~vv 285 (381)
+.|....+
T Consensus 125 ~~g~~v~i 132 (213)
T PRK10076 125 SEGVNVIP 132 (213)
T ss_pred hCCCcEEE
Confidence 77765433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 381 | ||||
| 3ljs_A | 338 | Crystal Structure Of Fructokinase From Xylella Fast | 9e-38 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 2e-28 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 3e-27 | ||
| 3hj6_A | 327 | Structure Of Halothermothrix Orenii Fructokinase (F | 2e-26 | ||
| 3iq0_A | 330 | Crystal Structure Of A Putative Ribokinase Ii In Co | 8e-21 | ||
| 3ewm_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 3e-20 | ||
| 3gbu_A | 313 | Crystal Structure Of An Uncharacterized Sugar Kinas | 8e-19 | ||
| 2dcn_A | 311 | Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase | 2e-17 | ||
| 3pl2_A | 319 | Crystal Structure Of A 5-Keto-2-Deoxygluconokinase | 2e-15 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 2e-15 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 7e-14 | ||
| 2qcv_A | 332 | Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl | 1e-13 | ||
| 3ry7_A | 304 | Crystal Sructure Of Sa239 Length = 304 | 7e-13 | ||
| 2v78_A | 313 | Crystal Structure Of Sulfolobus Solfataricus 2-Keto | 2e-12 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 4e-12 | ||
| 4e69_A | 328 | Crystal Structure Of A Sugar Kinase (Target Efi-502 | 6e-11 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 1e-08 | ||
| 2qhp_A | 296 | Crystal Structure Of Fructokinase (Np_810670.1) Fro | 8e-07 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 1e-06 | ||
| 2rbc_A | 343 | Crystal Structure Of A Putative Ribokinase From Agr | 2e-06 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 2e-06 | ||
| 3b1r_A | 320 | Structure Of Burkholderia Thailandensis Nucleoside | 2e-05 | ||
| 3b1n_A | 326 | Structure Of Burkholderia Thailandensis Nucleoside | 2e-05 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 1e-04 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 2e-04 |
| >pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 | Back alignment and structure |
|
| >pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex With Atp And Mg+2 From E.Coli Length = 330 | Back alignment and structure |
|
| >pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii Length = 313 | Back alignment and structure |
|
| >pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii In Complex With Atp Length = 313 | Back alignment and structure |
|
| >pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From Sulfolobus Tokodaii Complexed With 2-Keto-6-Phosphogluconate (Alpha-Furanose Form) Length = 311 | Back alignment and structure |
|
| >pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase (Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.89 A Resolution Length = 319 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 | Back alignment and structure |
|
| >pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 | Back alignment and structure |
|
| >pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3- Deoxygluconate Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|4E69|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132) From Oceanicola Granulosus, Unliganded Structure Length = 328 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution Length = 296 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|2RBC|A Chain A, Crystal Structure Of A Putative Ribokinase From Agrobacterium Tumefaciens Length = 343 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|3B1R|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Amp-Mg-Amp Length = 320 | Back alignment and structure |
|
| >pdb|3B1N|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase (Bthnk) In Complex With Adp-Mizoribine Length = 326 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 1e-155 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 1e-151 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 1e-149 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 1e-148 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 1e-148 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 1e-147 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 1e-139 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 1e-137 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 1e-133 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 1e-131 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-128 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 1e-128 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 1e-128 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-121 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 1e-118 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 2e-97 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 2e-91 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 2e-65 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 4e-60 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 1e-57 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 5e-54 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 5e-53 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 1e-51 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 2e-51 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 1e-50 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 1e-48 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 2e-48 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 3e-48 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 2e-45 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 3e-45 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 5e-45 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 1e-44 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 9e-43 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 9e-37 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 2e-31 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 4e-31 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 6e-31 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 6e-30 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 4e-17 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 1e-15 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 1e-15 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 1e-15 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 5e-15 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 1e-14 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 4e-12 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 438 bits (1129), Expect = e-155
Identities = 114/326 (34%), Positives = 163/326 (50%), Gaps = 8/326 (2%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
++CFGE LID + AF + GGAPANVAV +ARLGG+ F+G +G+D
Sbjct: 4 KKTILCFGEALIDMLAQPLV-KKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSD 62
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
FG L D E V G+ A+TALAFV L + GER F FYR P+AD+L +
Sbjct: 63 MFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHF 122
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
+ + A IFH S S+ + A+ AG ++S+D N R LWP+ +
Sbjct: 123 QDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPAS 182
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
+ AD++K+S EE+ +L +AV+ +L+ +LLLVT+ +YT+
Sbjct: 183 RLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRT 242
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLS-------TDFSLLQKEDQLRDALRFANAC 352
G V +V+ D+ AGDAFV G+L + + + LRFA A
Sbjct: 243 AGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAV 302
Query: 353 GALTVMERGAIPALPTREAVLNAIHA 378
GAL V +GA A+P VL+ I
Sbjct: 303 GALAVTRQGAFTAMPMLSEVLSLIQE 328
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 427 bits (1101), Expect = e-151
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 11/326 (3%)
Query: 56 ETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGK 115
+ V+ G + +D P SG+ LA+ +F K GG+ ANV+V AR G +SA + +
Sbjct: 4 NLTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSR 63
Query: 116 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA-DMLL 174
VG D FG L L+ V+ + D +T + F + + FYR P A D+ +
Sbjct: 64 VGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNI 123
Query: 175 QEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSA 234
+ A++ L + +A I + EP + H + +D + R W S
Sbjct: 124 ESADVSLDDVREADILWFTLTGFSEEPSRGTH-REILTTRANRRHTIFDLDYRPMFWESP 182
Query: 235 DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294
++A + + + + ++EE +P + L ++L +V +GP G
Sbjct: 183 EEATKQAEWALQHSTVAVGNKEECEIAVGETEP--ERAGRALLERGVELAIVKQGPKGVM 240
Query: 295 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
TKD + V V+ ++ GAGDAF + L +++ L LRFAN GA
Sbjct: 241 AMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGA 293
Query: 355 LTVMERGAIPALPTREAVLNAIHAPV 380
L A+PT + V +++ V
Sbjct: 294 LVASRLECSTAMPTTDEVEASLNQKV 319
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 424 bits (1092), Expect = e-149
Identities = 89/315 (28%), Positives = 135/315 (42%), Gaps = 11/315 (3%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAF-KKAPGGAPANVAVGIARLGGSSAFIGKVGADEF 121
V GE+L++ + + G + + P GAPA + RLG I VG D F
Sbjct: 6 VFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGF 65
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G + L + V+ G+ P T AFVT + G+R+F+F +A L +D
Sbjct: 66 GDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE 125
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+++ FH SL + A A K G V+S+DPN+R + + R+ +
Sbjct: 126 NILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPE-MRDAL 184
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ E DI SE E+ L+ P + + +K ++V G G YY+ +
Sbjct: 185 HFVLELTDIYMPSEGEVLLLSPHSTP--ERAIAGFLEEGVKEVIVKRGNQGASYYSANEQ 242
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
V+ VE VD TGAGD F ++ F AL++ANACGAL V RG
Sbjct: 243 FHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRG 295
Query: 362 AIPALPTREAVLNAI 376
+ + I
Sbjct: 296 PMEGTSRLMEIETFI 310
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-148
Identities = 78/317 (24%), Positives = 147/317 (46%), Gaps = 10/317 (3%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
++ G ID + E+ F K GG+PAN+ +G ++LG + FIGK+ D+ G
Sbjct: 14 LIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHG 73
Query: 123 YMLADILKENNVNGAGMRFDP-GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
+ ++ V+ + + D G +T LAF ++S E + YR AD+ L E++
Sbjct: 74 RFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE 133
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+ I ++K+ +L P + A + A + AK V + ++ + R W + ++
Sbjct: 134 AYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYY 193
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYD-DAVVYKLFHANLKLLLVTEGPDGCRYYTKDF 300
+ E +DI+ + EE L + D D + LF + +L+++ G +G YTK
Sbjct: 194 SLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAG 253
Query: 301 SG-RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
R K + + GAGD++ + L L + + AL++ +A ++ V +
Sbjct: 254 EAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSK 306
Query: 360 RGAIPALPTREAVLNAI 376
+ A+P+ E + I
Sbjct: 307 HSSSDAMPSVEEIEALI 323
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 420 bits (1083), Expect = e-148
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 12/314 (3%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV GE+L+D + T SL++S + + GG+PAN+AV ++RLG A I ++GAD FG
Sbjct: 24 VVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFG 83
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
L D+LK + G++ D RT + +V S R + ADM LQE ++
Sbjct: 84 NYLLDVLKGEQIITDGIQQDKERRTTIVYV---SKSTRTPDWLPYREADMYLQEDDIIFE 140
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 242
LI ++K+FH + L +P + I A A++ G ++ +DP R LWP D +
Sbjct: 141 LIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVE 200
Query: 243 SIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG 302
I AD +K S ++ L + P + V + +K +++T G +G +
Sbjct: 201 EIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLELGVKAVILTLGEEGVIASDGEEII 258
Query: 303 RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362
R+ +AVD TGAGDAF +G + L ++ +++ N A + GA
Sbjct: 259 RIPAFSEDAVDVTGAGDAFWSGFICGLL-------DGYTVKRSIKLGNGVAAFKIRGVGA 311
Query: 363 IPALPTREAVLNAI 376
+ +P++E ++
Sbjct: 312 LSPVPSKEDIIKEY 325
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 419 bits (1079), Expect = e-147
Identities = 100/330 (30%), Positives = 155/330 (46%), Gaps = 13/330 (3%)
Query: 47 PGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL 106
+ + V G+ +D VP + ++ K PGGA ANV V +ARL
Sbjct: 11 SSGLVPRGSHMKAMNKVWVIGDASVDLVPE-------KQNSYLKCPGGASANVGVCVARL 63
Query: 107 GGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR 166
GG FIG +G D+ G L + ++N V+ +R D +A+ V L +DGER F +
Sbjct: 64 GGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLV 123
Query: 167 NPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNL 226
+P AD + +L + + F++ SI L P + A + A+ ++AG + +D NL
Sbjct: 124 HPGADTYVSPQDLP--PFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNL 181
Query: 227 RLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLV 286
R +W + D+ E I A I K+S +E+ L+ Y L ++
Sbjct: 182 RSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLGCDTTII 239
Query: 287 TEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 346
+ G DG T + +V+ VD TGAGDAFV G+L LS L +A+
Sbjct: 240 SLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCW--DHALLAEAI 297
Query: 347 RFANACGALTVMERGAIPALPTREAVLNAI 376
ANACGA+ V +GA+ ALP + + +
Sbjct: 298 SNANACGAMAVTAKGAMTALPFPDQLNTFL 327
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-139
Identities = 102/319 (31%), Positives = 157/319 (49%), Gaps = 21/319 (6%)
Query: 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADE 120
L+ GE+LID + G L + F+K PGGAPANVAVG++RLG S+ I KVG D
Sbjct: 2 SLIASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDP 60
Query: 121 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD 180
FG L + L + NV+ G+ D T + FV L+ F+ Y + A + +++
Sbjct: 61 FGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLK-GASPSFLLYDD-VAYFNMTLNDIN 118
Query: 181 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS-ADKARE 239
++ +AKI ++GS+ L P + + K K + ++ ++D NLRL LW ++ +
Sbjct: 119 WDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLI-AFDVNLRLDLWRGQEEEMIK 177
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
+ + ADI+K SEEE+ +L + L +T GP GCR +
Sbjct: 178 VLEESIKLADIVKASEEEVLYLENQGVEVKGS----------MLTAITLGPKGCRLIKNE 227
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
V V +D TGAGDAF+A +L + K L +FAN AL+ +
Sbjct: 228 TVVDVPSYNVNPLDTTGAGDAFMAALLVGILKL-----KGLDLLKLGKFANLVAALSTQK 282
Query: 360 RGAIPALPTREAVLNAIHA 378
RGA + P ++ +L A
Sbjct: 283 RGAW-STPRKDELLKYKEA 300
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 393 bits (1011), Expect = e-137
Identities = 91/313 (29%), Positives = 138/313 (44%), Gaps = 13/313 (4%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
V+ FGE ++ V G L + AF K GA NVA+G+ARLG + ++G D G
Sbjct: 29 VITFGEAMMLLVADRPG-PLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMG 87
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG-EREFMFYRNPSADMLLQEAELDL 181
L + ++ + + D +T F +DG + ++R SA + A++D
Sbjct: 88 RYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE 147
Query: 182 SLITKAKIFH-YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREG 240
+ + A+ H G I+ A + AG +S+DPNLR LW + + R+
Sbjct: 148 AWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDA 207
Query: 241 ILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF 300
I + AD + EE FLT P + V KL++V G +G + +
Sbjct: 208 INDLATRADWVLPGMEEGRFLTGETTP--EGVARFYRQLGAKLVVVKLGAEGAYFDGEAG 265
Query: 301 SGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
SGRV G V E VD GAGD F G++S L + +A++ GA V
Sbjct: 266 SGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQV 318
Query: 360 RGAIPALPTREAV 372
G LPTR +
Sbjct: 319 LGDSEGLPTRAEL 331
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 381 bits (982), Expect = e-133
Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 19/319 (5%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
V+ GE LI F G L F+K G+ N + + R S + I +VG DEFG
Sbjct: 4 VIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFG 62
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELD 180
+ + + ++ + ++ D + T + F+ + E ++YR SA L +++
Sbjct: 63 KNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDIN 122
Query: 181 LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
+ + +++ H I+L I++ K A I A + AK S D N+R LW S +KA+E
Sbjct: 123 ENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKE 178
Query: 240 GILSIWETADI--IKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
ILSI + DI + ++ L DP D K +K+LL G G Y
Sbjct: 179 TILSILKKYDIEVLITDPDDTKILLDVTDP--DEAYRKYKELGVKVLLYKLGSKGAIAYK 236
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
+ KV D TGAGDA +S LQ +D + +L A L +
Sbjct: 237 DNVKAFKDAYKVPVEDPTGAGDAMAGTFVSL------YLQGKD-IEYSLAHGIAASTLVI 289
Query: 358 MERGAIPALPTREAVLNAI 376
RG PT E +
Sbjct: 290 TVRGDNELTPTLEDAERFL 308
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 376 bits (967), Expect = e-131
Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 32/318 (10%)
Query: 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
+ ++V GE L D +P K GGAPAN A +++ G S + VG D
Sbjct: 3 NNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGND 50
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
E G + ++ KE + R D T VTL +G + + D + EL
Sbjct: 51 ELGDEIMEVFKEKQLKNQIERVD--YPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDEL 108
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWPSADKAR 238
L + +GS++ E ++ D G + +D NLR + +
Sbjct: 109 K-RLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT-----K 162
Query: 239 EGILSIWETADIIKISEEEISFLTQGED----PYDDAVVYKLFHANLKLLLVTEGPDGCR 294
E + ++ +I+KI++EE+ +++ D L NLK+L++T G +G
Sbjct: 163 EVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSY 222
Query: 295 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
+T + KV D GAGD+F A + + + +A + A A
Sbjct: 223 VFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASIL-------NGKSVPEAHKLAVEVSA 275
Query: 355 LTVMERGAIPALPTREAV 372
+ GA+P LP
Sbjct: 276 YVCTQSGAMPELPVILKD 293
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 371 bits (956), Expect = e-128
Identities = 80/338 (23%), Positives = 139/338 (41%), Gaps = 25/338 (7%)
Query: 47 PGDGL---SETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGI 103
G+ +E + ++ GE + + P ++ G N A +
Sbjct: 7 HSSGVDLGTENLYFQSMMHILSIGECMAELAPA------DLPGTYRLGFAGDTFNTAWYL 60
Query: 104 ARLGGSS--AFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGERE 161
ARL S ++ +G D + + ++G G+R PG L +TL GER
Sbjct: 61 ARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERS 119
Query: 162 FMFYRNPSAD-MLLQEAELDLSLITKAKIFHYGSISL--ITEPCKSAHIAAAKAAKDAGV 218
F ++R SA L +A+ + + +A + ++ I+L + + ++ + A A+ G
Sbjct: 120 FAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQCGRATLLRALAQARATGR 179
Query: 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 278
+++DPNLR LW + E I+ +DI S E+ + P DA +
Sbjct: 180 TIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAGP--DATADRYAR 237
Query: 279 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQ 337
A ++ ++V GP + GRV V VD T AGD+F AG+L +
Sbjct: 238 AGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP--- 294
Query: 338 KEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375
L A+ A A V +GA+ +P+ +A
Sbjct: 295 ----LETAIAAAAALAGQVVQGKGALVEVPSLRPHADA 328
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 371 bits (954), Expect = e-128
Identities = 91/315 (28%), Positives = 126/315 (40%), Gaps = 18/315 (5%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV GE L+ VP G L + GGA NVAV +ARLG F+G+VG DE G
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELG 62
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
M+ + L+ V+ R P T L G+ +YR SA L D
Sbjct: 63 AMVEERLRAEGVDLTHFRRAP-GFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPD 121
Query: 183 LITKAKIFHYGSISLITEP-CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+ + H I+ P ++ + A + AK GV +S D N R LW + AR +
Sbjct: 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEE-ARGFL 180
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
D++ +SEEE L + L + +++ G G +
Sbjct: 181 ERALPGVDLLFLSEEEAELLFGRVEEA-------LRALSAPEVVLKRGAKGAWAFVDGRR 233
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
VEAVD GAGDAF AG L+ + + LR AN GA RG
Sbjct: 234 VEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRG 286
Query: 362 AIPALPTREAVLNAI 376
P RE + +
Sbjct: 287 DHEGAPYREDLEVLL 301
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 371 bits (954), Expect = e-128
Identities = 88/319 (27%), Positives = 136/319 (42%), Gaps = 21/319 (6%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
++ GE+LI+F G L F+K G+ AN V + G I KVG DEFG
Sbjct: 4 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFG 62
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTL--RSDGEREFMFYRNPSADMLLQEAELD 180
Y + L+ V+ + M+ DP A T + F+ + E ++YR SA L ++D
Sbjct: 63 YNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD 122
Query: 181 LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
+ A + H I+L I+ K A A + A + S+D N+RL LW + + A+
Sbjct: 123 EEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEE-AKR 177
Query: 240 GILSIWET--ADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
IL + + ++ + DP A K F +++++ GP G Y
Sbjct: 178 EILKLLSKFHLKFLITDTDDSKIILGESDPDKAA---KAFSDYAEIIVMKLGPKGAIVYY 234
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
G +V D TGAGDA LS + + + AL +A L V
Sbjct: 235 DGKKYYSSGYQVPVEDVTGAGDALGGTFLSL------YYKGFE-MEKALDYAIVASTLNV 287
Query: 358 MERGAIPALPTREAVLNAI 376
M RG LPT + + +
Sbjct: 288 MIRGDQENLPTTKDIETFL 306
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 351 bits (903), Expect = e-121
Identities = 70/328 (21%), Positives = 132/328 (40%), Gaps = 33/328 (10%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSA----FIGKVGA 118
+ GE +I+ + K+ GG N +V IAR +A ++ +G
Sbjct: 7 IAVIGECMIELSE--------KGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGT 58
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D F + D NV+ + + L ++ S GER F ++RN +A +E
Sbjct: 59 DSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASE 118
Query: 179 LDLSLITKAKIFHYGSISLIT-----EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS 233
++ + F Y +S I+ + ++ + + G + +D N R LW S
Sbjct: 119 QSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWAS 178
Query: 234 ADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293
++ ++ + E DI ++ ++ L + + V+ + +A +K ++V G D C
Sbjct: 179 KEETQQVYQQMLECTDIAFLTLDDEDALWGQQPV--EDVIARTHNAGVKEVVVKRGADSC 236
Query: 294 RYYTKD-FSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFA 349
V +K+ + +D T AGD+F AG L+ T S +A +
Sbjct: 237 LVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRG 289
Query: 350 NACGALTVMERGAI---PALPTREAVLN 374
+ + + RGAI A+P +
Sbjct: 290 HLTASTVIQYRGAIIPREAMPAEGHHHH 317
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 344 bits (886), Expect = e-118
Identities = 73/320 (22%), Positives = 133/320 (41%), Gaps = 21/320 (6%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPA-----FKKAPGGAPANVAVGIARLGGSSAFIGKVG 117
V+C G ++D ++ + + GG N A I+RLG +A + ++G
Sbjct: 8 VICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIG 67
Query: 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
D G + D ++ N++ ++ D T++ + DGER F+ R + L
Sbjct: 68 KDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNR-NGSLWKLNID 126
Query: 178 ELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
++D + ++AK+ SI A AK +++ D + P ++
Sbjct: 127 DVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICAD-----MIKPRLNET 181
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
+ I D + + E LT E D + +K +++ G DGC
Sbjct: 182 LDDICEALSYVDYLFPNFAEAKLLTGKETL--DEIADCFLACGVKTVVIKTGKDGCFIKR 239
Query: 298 KDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356
D + +V + + A+D GAGD F +G ++ L + LR+ RFANA A++
Sbjct: 240 GDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAIS 292
Query: 357 VMERGAIPALPTREAVLNAI 376
V+ GA + R+ V +
Sbjct: 293 VLSVGATTGVKNRKLVEQLL 312
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 293 bits (751), Expect = 2e-97
Identities = 70/338 (20%), Positives = 127/338 (37%), Gaps = 35/338 (10%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV FGE+++ P + ++ +F GGA ANVA +A++G + F+ K+ + G
Sbjct: 15 VVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLG 73
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGER-EFMFYRNPSADMLLQEAELDL 181
A L++ V + G R + F+ + + + ++ R SA + + D
Sbjct: 74 DAAAGHLRKFGVKTDYIARG-GNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW 132
Query: 182 -SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
++ A+ FH+ I+ + + A K A + GV +S D N R LW + A++
Sbjct: 133 EKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEE-AQK 191
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA-------------NLKLLLV 286
++ E D++ +EE+I + D KL N K + +
Sbjct: 192 VMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGI 251
Query: 287 T--------EGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 338
T + ++ VD GAGD+F ++ F
Sbjct: 252 TLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD---- 307
Query: 339 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 376
+ FA A L G + + E +
Sbjct: 308 ---SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLA 341
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 2e-91
Identities = 73/335 (21%), Positives = 129/335 (38%), Gaps = 31/335 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
+ FGE+++ F P L L ++ + G N+ +A +A I K+ A+ G
Sbjct: 5 IAAFGEVMLRFTP-PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLG 63
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY--RNPSADMLLQEAELD 180
L++ ++ + G F + + Y R+ SA + + + D
Sbjct: 64 EAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD 122
Query: 181 L-SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS--ADK 236
+ + + + H ISL +TE + A + A+ A + +D N R L + A
Sbjct: 123 FEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALF 182
Query: 237 AREGILSIWETADIIKISEEEISFLTQGEDPYD--------DAVVYKLFHANLKLLLVTE 288
R+ I DI+ S ++ L D + + + NL+ T
Sbjct: 183 MRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTT 242
Query: 289 GPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQ 341
YT++ + + + +D GAGDA+ AGIL S ++S
Sbjct: 243 RSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS------- 295
Query: 342 LRDALRFANACGALTVMERGAIPALPTREAVLNAI 376
L A+ FA G L +G IP L T + V + +
Sbjct: 296 LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVL 329
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 2e-65
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 34/319 (10%)
Query: 63 VVCFGEMLIDFVPTVSGL-SLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
+ C G +D++ V S P+ +K GGA AN AVGI +LG +S + VG
Sbjct: 8 ITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGY 67
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D LK ++N + + + T A++ D + F A +E
Sbjct: 68 DFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFL--WGAAKHYKELN 125
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
+I H I ++ AK A ++S+DP LP + ++
Sbjct: 126 PP---NFNTEIVH------IATGDPEFNLKCAKKAY-GNNLVSFDPGQDLPQY-----SK 170
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
E +L I E + + +++ E + + D + + L+VT+G G YTK
Sbjct: 171 EMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYL-----ERVDALIVTKGSKGSVIYTK 225
Query: 299 DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
D + +K + +D TGAGD++ AG LS + L A + V
Sbjct: 226 DKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVV 278
Query: 358 MERGAIPALPTREAVLNAI 376
+G LPT + V+ +
Sbjct: 279 EAKGCQTNLPTWDKVVERL 297
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 4e-60
Identities = 53/307 (17%), Positives = 106/307 (34%), Gaps = 25/307 (8%)
Query: 63 VVCFGEMLIDFVPTVSGL----SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
++C G +++D + V S + + GG +N ++ LG AF+G +
Sbjct: 20 ILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAP 79
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTL-RSDGEREFMFYRNPSADMLLQEA 177
+ D L+ +V+ F +A V + + G R ++Y D +
Sbjct: 80 GHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPD--VSAT 137
Query: 178 ELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
+ + +T+ K H + + I A + ++ + +K
Sbjct: 138 DFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPE--------QKIRVSVEVEKP 189
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
RE + ++ D++ +S++ L + + +L+ +G
Sbjct: 190 REELFQLFGYGDVVFVSKDVAKHLG-FQSAEEALRGLYGRVRKGAVLVCAWAEEGADALG 248
Query: 298 KDFSGRVQ--GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 355
D VD GAGD F A ++ LS S +++ALRF
Sbjct: 249 PDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGK 301
Query: 356 TVMERGA 362
+G
Sbjct: 302 KCGLQGF 308
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 1e-57
Identities = 50/302 (16%), Positives = 101/302 (33%), Gaps = 28/302 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKVGADEF 121
++ G + D + T G GG+ +A+ + +G VG+D F
Sbjct: 5 LLVIGSLAFDDIETPFG-------RSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-F 56
Query: 122 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL 181
G D+L N++ G++ +T D + AE D
Sbjct: 57 GKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNV-----FAEFDP 111
Query: 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+ + + + I + + K + + E +
Sbjct: 112 HVPQYYRDSKFVCLGNIDPELQLKVLDQIDDPKLVVCD---------TMNFWIEGKPEEL 162
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
+ D+ +++ E L+ + A + K L++ +G G +T +
Sbjct: 163 KKVLARVDVFIVNDSEARLLSGDPNLVKTAR--IIREMGPKTLIIKKGEHGALLFTDNGI 220
Query: 302 GRVQGLKVEA-VDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360
+E+ D TGAGD F G + L+ + E ++R A+ + +A + V +
Sbjct: 221 FAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASFCVEQF 278
Query: 361 GA 362
G
Sbjct: 279 GP 280
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 5e-54
Identities = 63/329 (19%), Positives = 117/329 (35%), Gaps = 35/329 (10%)
Query: 58 RESPLVVCFGEMLIDFVPTVSGL-SLAES-PA-FKKAPGGAPANVAVGIARLGGSSAFIG 114
R+ P ++ FG ++D S P K + GG N+A +AR+G ++ F+
Sbjct: 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMS 63
Query: 115 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 174
+G DE G + + K+ + G T L +GE + + +
Sbjct: 64 ILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIA-DMKSIGAM 122
Query: 175 QEAELD--LSLITKAKIFHYGSISLI-TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW 231
+D + A+ ++ ++ + +L DP
Sbjct: 123 NTDFIDSKREIFENAEYT------VLDSDNPEIMEYLLKNFKDKTNFIL--DPV------ 168
Query: 232 PSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVT 287
SA+KA + + + IK + E L G D +K + ++
Sbjct: 169 -SAEKA-SWVKHLIKDFHTIKPNRHEAEILA-GFPITDTDDLIKASNYFLGLGIKKVFIS 225
Query: 288 EGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 347
DG Y G+++ +V+ + TGAGD+FVAG+ + D ++
Sbjct: 226 LDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVK 278
Query: 348 FANACGALTVMERGAIPALPTREAVLNAI 376
FA +T+ I + VL +
Sbjct: 279 FAMTMSNITISHEETIHPDMALDTVLAKL 307
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 5e-53
Identities = 53/317 (16%), Positives = 92/317 (29%), Gaps = 41/317 (12%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
+ G + D + A GG A+ + LG + I K ++
Sbjct: 14 ITFIGHVSKDVNVVDGK--------REIAYGGGVVMGAITSSLLGVKTKVITKCTREDVS 65
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
L++N V + F RT SD + F + + +
Sbjct: 66 KF--SFLRDNGVE---VVFLKSPRTTSIENRYGSDPDTRESFLISAADPFTESDLAFI-- 118
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW---PSADKARE 239
+ + H + P + + LS D + + + E
Sbjct: 119 ---EGEAVHINPLWYGEFP-----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 170
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
+ D+ K+ E LT D + + K++L T G + +
Sbjct: 171 MKEKYLKYLDLFKVDSREAETLTGTNDLRESC--RIIRSFGAKIILATHA-SGVIVFDGN 227
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
F TG GD A L + K+ + A +FA A ++ +
Sbjct: 228 FY-EASFRSWSLEGRTGRGDTCTAAFLV------GFVFKKMSIEKATKFAAAVTSVKMRH 280
Query: 360 RGAIPALPTREAVLNAI 376
G P R L AI
Sbjct: 281 PG-----PLRREDLEAI 292
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 1e-51
Identities = 63/289 (21%), Positives = 110/289 (38%), Gaps = 29/289 (10%)
Query: 86 PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGA 145
P ++ GG N+A + LGG + +G +GA + L + ++ +R P
Sbjct: 40 PTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVDAQPYLDR-MDALGLSREYVRVLPDT 98
Query: 146 RTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSA 205
+A A +T D + F+ P A M ++++
Sbjct: 99 YSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAG--------EAKDIKLAIVGPDGFQG 148
Query: 206 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 265
+ + AGV +DP LPL R I E A I +++ E +
Sbjct: 149 MVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSI----ELATYIAVNDYEAKLVCDKT 203
Query: 266 DPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAG 324
+D + + ++ L++T G G +D + ++ ++ E +D TG GDAF G
Sbjct: 204 GWSEDEI-----ASRVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGG 258
Query: 325 ILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373
+L + F A R A+ GAL + +G PTR +
Sbjct: 259 LLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQTYAPTRAEID 300
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 2e-51
Identities = 72/322 (22%), Positives = 119/322 (36%), Gaps = 35/322 (10%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
V+C G ++D + V+ + + G ++ A + R+GG ++ G VG
Sbjct: 32 VLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGD 91
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
DE G + L E+ ++ +GM PGAR+AL+ + + + GER + + + + ++
Sbjct: 92 DETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD--HRLHEKKRA 149
Query: 179 LDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
I + + E + A+ G D D A
Sbjct: 150 CTPEDIALFDAVL---VDVRWPELA----LDVLTVARALGKPAILDG----------DVA 192
Query: 238 REGIL-SIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296
L + A I SE + LT G + D + + VT GP GC +
Sbjct: 193 PVETLEGLAPAATHIVFSEPAATRLT-GLETVKDMLPVLHARYPQTFIAVTAGPAGCWWT 251
Query: 297 TKDFSG--RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354
D ++VEAVD AGD F ++ R A+R ++ A
Sbjct: 252 EADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAA 304
Query: 355 LTVMERGAIPALPTREAVLNAI 376
L G PTRE A+
Sbjct: 305 LKCTVFGGRIGAPTREETEEAM 326
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 1e-50
Identities = 67/292 (22%), Positives = 98/292 (33%), Gaps = 31/292 (10%)
Query: 86 PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGA 145
GG N+A I LGG A +G GAD Y D LK VN + A
Sbjct: 50 DDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGADFADYR--DWLKARGVNCDHVLISETA 107
Query: 146 RTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCK 203
TA T D + FY P A + +L +S I K ++ G +
Sbjct: 108 HTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAIGKPELVIIG-----ANDPE 160
Query: 204 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263
+ + + G+ + DP+ +L E I + A + ++ E L
Sbjct: 161 AM-FLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLS 214
Query: 264 GEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG-RVQGLK-VEAVDATGAGDAF 321
+ V A + L + T GP G D + V + D TG GDAF
Sbjct: 215 KTGWSEADV-----MAQIDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAF 269
Query: 322 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373
AG L+ S L + + + L + G EA
Sbjct: 270 RAGFLTGRSAGLG-------LERSAQLGSLVAVLVLESTGTQEWQWDYEAAA 314
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 1e-48
Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
TV+G ++ A GG AN AV R G + AFI G D G + L +N++
Sbjct: 30 TVTG------NHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID 83
Query: 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 193
+ G T +A + + +GE + A+ L A ++ I A
Sbjct: 84 ITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASA---- 137
Query: 194 SISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 251
L+ E + +AAAK A +++ +P P ARE + DII
Sbjct: 138 ---LLMQLESPLESVMAAAKIAHQNKTIVALNPA---P-------ARELPDELLALVDII 184
Query: 252 KISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL 307
+E E LT G +D L ++ +L+T G G RV G
Sbjct: 185 TPNETEAEKLT-GIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGF 243
Query: 308 KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367
+V+AVD AGD F +++ L + L +A+RFA+A A+ V +GA P++P
Sbjct: 244 RVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVP 296
Query: 368 TREAVLNAI 376
RE + +
Sbjct: 297 WREEIDAFL 305
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 164 bits (419), Expect = 2e-48
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
T+ A K GG AN A+ AR+ + FI K+G D + + K +++
Sbjct: 28 TLHVEE-----AQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHID 82
Query: 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 193
+ + A+T AF+T+ ++G+ Y A+M + ++ I A
Sbjct: 83 TSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADF---- 136
Query: 194 SISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 251
++ E A I+A + AK GV +P P A+ + DII
Sbjct: 137 ---VVAQLEVPIPAIISAFEIAKAHGVTTVLNPA---P-------AKALPNELLSLIDII 183
Query: 252 KISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL 307
+E E L+ G ++ +K +L+T G G + TK+ S ++
Sbjct: 184 VPNETEAELLS-GIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAY 242
Query: 308 KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367
KV A+D T AGD F+ +S+L+ +D L DA+ F N +LTV + GA ++P
Sbjct: 243 KVNAIDTTAAGDTFIGAFVSRLNKS------QDNLADAIDFGNKASSLTVQKHGAQASIP 296
Query: 368 TREAV 372
E V
Sbjct: 297 LLEEV 301
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 3e-48
Identities = 43/315 (13%), Positives = 88/315 (27%), Gaps = 51/315 (16%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
+ FG + ID + +V + S + GG N A+ + VG
Sbjct: 23 LAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK 82
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL 179
LA ++ +N + + ++ ++ ++ A
Sbjct: 83 THREYLAM-IESMGINTGHVEKFEDESGPICYIAT-DGKKQVSFMHQGAM-------AAW 133
Query: 180 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKARE 239
L + + H T P AK + +DP+ + + ++
Sbjct: 134 APQLADEYEYVH-----FSTGP------NYLDMAKSIRSKIIFDPSQEIHKYS-----KD 177
Query: 240 GILSIWETADIIKISEEEISFLTQ--GEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
+ E + + ++ E + G + VT G G +
Sbjct: 178 ELKKFHEISYMSIFNDHEYRVFREMTGLSSPKVTTI------------VTNGERGSSLFM 225
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
+ D GAGD+F AG+ L S + + + +
Sbjct: 226 DGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVI 277
Query: 358 MERGAIPALPTREAV 372
+ G E +
Sbjct: 278 -DDGIENFSLNMEDL 291
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 2e-45
Identities = 67/324 (20%), Positives = 111/324 (34%), Gaps = 34/324 (10%)
Query: 63 VVCFGEMLIDFVPTVSGL-SLAES-PA-FKKAPGGAPANVAVGIARLGGSSAFIGKVGAD 119
++ G ID + + S P + + GG N A ++RLG I G D
Sbjct: 6 ILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGD 65
Query: 120 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMF-----YRNPSADMLL 174
G ++A+ ++ V F T L DG Y+ + L
Sbjct: 66 VTGEVVAEAARQAGVEDTPFTFLDRR-TPSYTAILERDGNLVIALADMDLYKLFTPRRLK 124
Query: 175 QEAELDLSLITKAKIFHYGSISLI-TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPS 233
A + I + L + A A+ P + + P+
Sbjct: 125 VRAVRE--AIIASDFL------LCDANLPEDTLTALGLIARACEK-----PLAAIAISPA 171
Query: 234 ADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293
KA + + + DI+ ++E E LT L A L +VT G
Sbjct: 172 --KAVK-LKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGASEV 228
Query: 294 RYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 352
+ + L E D TGAGDA +G L+ ++ + +R+ALR A
Sbjct: 229 VAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAA 281
Query: 353 GALTVMERGAIPALPTREAVLNAI 376
A+TV A ++++V +
Sbjct: 282 AAITVQSSFATSQDLSKDSVEAML 305
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 3e-45
Identities = 68/317 (21%), Positives = 120/317 (37%), Gaps = 64/317 (20%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKVGADEFGYMLADILKENNV 134
T + PGG AN AV +A++G F+ +G D++ +L + ++ +
Sbjct: 40 TQKAIE------MNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI 93
Query: 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSADMLLQEAELDLSLITKAKI 189
G T AF+ + G+ N P A+ L++ +D + ++++ I
Sbjct: 94 TGY---IRVSLPTGRAFIEVDKTGQ-------NRIIIFPGANAELKKELIDWNTLSESDI 143
Query: 190 FHYGSISLIT------EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS 243
L+ E + AK ++ +DP P A+
Sbjct: 144 -------LLLQNEIPFE-------TTLECAKRFNGIVIFDPA------P----AQGINEE 179
Query: 244 IWETADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRYYTKD 299
I++ D + +E+EI L+ + + K +K ++V G G K+
Sbjct: 180 IFQYLDYLTPNEKEIEALS-KDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKN 238
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
KV+AVD T AGD F LS + +A+ F A A++V
Sbjct: 239 EKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTR 291
Query: 360 RGAIPALPTREAVLNAI 376
GA ++P RE V +
Sbjct: 292 LGAQSSIPAREEVEAFL 308
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 5e-45
Identities = 74/308 (24%), Positives = 107/308 (34%), Gaps = 57/308 (18%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
TV S + PGG AN AV AR G F G G D L L+ N V
Sbjct: 45 TVLAAS------LTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVG 98
Query: 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSADMLLQEAELDLSLITKAKIF 190
PG + A + + + E N P A+ L S + +
Sbjct: 99 LDRTVTVPGP-SGTAIIVVDASAE-------NTVLVAPGANAHLTPVP---SAVANCDV- 146
Query: 191 HYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA 248
L+T E + +AAA+AA+ A V+ + + P A + R + + A
Sbjct: 147 ------LLTQLEIPVATALAAARAAQSADAVVMVNAS---P----AGQDRSSLQDLAAIA 193
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK 308
D++ +E E + ++T G G RY D V
Sbjct: 194 DVVIANEHEANDWPSPPTH----------------FVITLGVRGARYVGADGVFEVPAPT 237
Query: 309 VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368
V VD GAGD F + + + + ALR A A GAL + G P
Sbjct: 238 VTPVDTAGAGDVFAGVLAANWPRNPGS---PAERLRALRRACAAGALATLVSGVGDCAPA 294
Query: 369 REAVLNAI 376
A+ A+
Sbjct: 295 AAAIDAAL 302
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-44
Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 50/312 (16%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
T+ G F GG AN V ARLG ++ + KVG D FG + LK+N+++
Sbjct: 50 TIHG------HKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIS 103
Query: 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSADMLLQEAELD--LSLITKAK 188
A T A + + ++G+ N A++LL +L ++I++AK
Sbjct: 104 TEFTYQTKDAATGTASIIVNNEGQ-------NIIVIVAGANLLLNTEDLRAAANVISRAK 156
Query: 189 IFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 246
+ ++ E + + A A+ +GV ++P A + +
Sbjct: 157 V-------MVCQLEITPATSLEALTMARRSGVKTLFNP---------APAIADLDPQFYT 200
Query: 247 TADIIKISEEEISFLTQGEDPYDDA----VVYKLFHANLKLLLVTEGPDGCRYYTKD--F 300
+D+ +E E LT G A L +++++T G +GC ++
Sbjct: 201 LSDVFCCNESEAEILT-GLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPE 259
Query: 301 SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360
+ KV+AVD TGAGD+FV + L+ L D L +N A++V
Sbjct: 260 PKHIPTEKVKAVDTTGAGDSFVGALAFYLA-----YYPNLSLEDMLNRSNFIAAVSVQAA 314
Query: 361 GAIPALPTREAV 372
G + P ++ +
Sbjct: 315 GTQSSYPYKKDL 326
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 149 bits (380), Expect = 9e-43
Identities = 59/306 (19%), Positives = 104/306 (33%), Gaps = 60/306 (19%)
Query: 76 TVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135
++ G+ + GG AN A+ ++R G + I G D G + +K +
Sbjct: 28 SIHGVK------VSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81
Query: 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRN-----PSADMLLQEAELD--LSLITKAK 188
+ + + +DG+ N +A E+ ++
Sbjct: 82 LLPDGHFNQH-SDTSIILNSADGD-------NAIITTTAAADTFSLDEMIPHMADAVAGD 133
Query: 189 IFHYGSISLIT--EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 246
I L+ A + A+ G+ ++P+ P +W
Sbjct: 134 I-------LLQQGNFSLDKTRALFQYARSRGMTTVFNPS---P-------VNPDFCHLWP 176
Query: 247 TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQG 306
DI ++E E L +K L++T+G G +
Sbjct: 177 LIDIAVVNESEAELLQP---------------YGVKTLVITQGAAGAWLVQEGQRQFCPA 221
Query: 307 LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366
+ EA+D TGAGD F+A +L+ LL+ AL A+ A+TV RG + A
Sbjct: 222 VPAEALDTTGAGDTFLAVMLASA-----LLRGVAPDALALAHASRAAAITVSRRGTLSAF 276
Query: 367 PTREAV 372
P +
Sbjct: 277 PGSREL 282
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 9e-37
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 29/299 (9%)
Query: 82 LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141
+ +A GG+ N A G+A LGG +A+ G V AD+ G + ++ V+
Sbjct: 69 YSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPK 128
Query: 142 DPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 199
TA + FVT DGER Y + L +++ ++ AK+ ++
Sbjct: 129 GAFPPTARSMIFVT--EDGERSMNTYLGACVE--LGPEDVEADVVADAKVTYFEGYLWDP 184
Query: 200 EPCKSAHIAAAKAAKDAG--VVLSY-DPNLRLPLWPSADKAREGILSIWETA--DIIKIS 254
K A + A+ A G + ++ D D+ R L + + DI+ +
Sbjct: 185 PRAKEAILDCARIAHQHGREMSMTLSDSFC-------VDRYRGEFLDLMRSGKVDIVFAN 237
Query: 255 EEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVD 313
+E L Q +D ++A+ A+ K+ VT +G V +++ E VD
Sbjct: 238 RQEALSLYQTDDF-EEAL--NRIAADCKIAAVTMSENGAVILKGRERYYVNAIRIREVVD 294
Query: 314 ATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372
TGAGD F +G L + S L D + + + + G P EA
Sbjct: 295 TTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAAGIVIQQIGPRPMTSLSEAA 346
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-31
Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 57/318 (17%)
Query: 82 LAESPAFKKAPGGAPANVA-----VGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136
+ + P + PGG+ NVA + A G ++G + D +G +L + + +
Sbjct: 53 IEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIV- 111
Query: 137 AGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLITKAKIF 190
+ A + +T ER + + L + + + +++IF
Sbjct: 112 MAVEHTTKAGSGACAVCIT---GKERTLVADLGAANH--LSSEHMRSPAVVRAMDESRIF 166
Query: 191 H---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDPNLRLPLWPSADKAREGILS 243
+ + +T + + A + A++ + LS P + +
Sbjct: 167 YFSGF----TLT-VDVNHVLQACRKAREVDGLFMINLS-APFI-------MQFFSAQLGE 213
Query: 244 IWETADIIKISEEEISFLTQGEDPYDDAV---------VYKLFHANLKLLLVTEGPDGCR 294
+ DII + E D V ++++ T +
Sbjct: 214 VLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTV 273
Query: 295 YYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
TKD V ++ + +D GAGDAF+ G LS + LR +
Sbjct: 274 LATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKD-------LRRCCETGHY 326
Query: 352 CGALTVMERGA-IPALPT 368
+ G P P+
Sbjct: 327 TAQEVIQRDGCSFPEKPS 344
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 4e-31
Identities = 60/325 (18%), Positives = 105/325 (32%), Gaps = 67/325 (20%)
Query: 89 KKAPGGAPANVAVGIARL---GGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGA 145
PGG+ N + +L GS+ ++G +G D G +L ++ + + PG
Sbjct: 84 TSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLA-TRFMVAPGQ 142
Query: 146 RTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFH---YGSISLITE 200
T + + ER + + E + + A IF+ Y +T
Sbjct: 143 STGVCAVLIN---EKERTLCTHLGACGS--FRLPEDWTTFASGALIFYATAY----TLTA 193
Query: 201 PCKSAHIAAAKAAKDAGVV----LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEE 256
K+A A A + LS P + ++ + S+ +I+ +EE
Sbjct: 194 TPKNALEVAGYAHGIPNAIFTLNLS-APFC-------VELYKDAMQSLLLHTNILFGNEE 245
Query: 257 EISFLTQGEDPYDDAVVYKLFHANL----------------------KLLLVTEGPDGCR 294
E + L + + KL+++T G +
Sbjct: 246 EFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVI 305
Query: 295 YYTKDFSGRVQGLKVE--------AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 346
+ G V +V VD GAGDAFV G L LS + ++ +
Sbjct: 306 AAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCI 358
Query: 347 RFANACGALTVMERGAIPALPTREA 371
NAC + G +
Sbjct: 359 MCGNACAQDVIQHVGFSLSFTFTSG 383
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 6e-31
Identities = 60/321 (18%), Positives = 108/321 (33%), Gaps = 53/321 (16%)
Query: 80 LSLAESPAFKKAPGGAPAN---VAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136
L E + GG+ N VA I + ++ F G VG DE+ +L + N VN
Sbjct: 67 QELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVN- 125
Query: 137 AGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFH- 191
+ + T VT +R + D + D + + A+ F+
Sbjct: 126 VQYQRSATSPTGTCAVLVT---GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182
Query: 192 --YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDPNLRLPLWPSADKAREGILSIW 245
+ T + ++ AK A G + LS P + + + I+
Sbjct: 183 SGF----FFT-VSFESALSVAKEAAATGRMFMMNLS-APFV-------PQFYKNNLEEIF 229
Query: 246 ETADIIKISEEEISFLTQGEDPYDD---------AVVYKLFHANLKLLLVTEGPDGCRYY 296
D++ +E E L + + + A + K +++++T+G D
Sbjct: 230 PYVDVLFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLI 289
Query: 297 TKDFSGRVQ-----GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
+ + VD GAGDAFV G L+QL + + ++
Sbjct: 290 EAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT-------VDVCIKCGIW 342
Query: 352 CGALTVMERGA-IPALPTREA 371
+ G P+ A
Sbjct: 343 AAREIIQRSGCTFEGEPSFCA 363
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 6e-30
Identities = 64/317 (20%), Positives = 117/317 (36%), Gaps = 55/317 (17%)
Query: 81 SLAESPAFKKAPGGAPANVAV----GIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136
L + + GG+ N I + ++ F G +G D+FG +L E +V+
Sbjct: 51 ELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVD- 109
Query: 137 AGMRFDPGARTA--LAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIF 190
A T A +T D +A+ +E LDL L+ KA++
Sbjct: 110 AHYYEQNEQPTGTCAACIT--GDNRSLIANLA--AANCYKKEKHLDLEKNWMLVEKARVC 165
Query: 191 H---YGSISLITEPCKSAHIAAAKAAKDAGVV----LSYDPNLRLPLWPSADKAREGILS 243
+ + +T + + A A + + LS P + + +E ++
Sbjct: 166 YIAGF----FLTV-SPESVLKVAHHASENNRIFTLNLS-APFI-------SQFYKESLMK 212
Query: 244 IWETADIIKISEEEISFLTQGEDPYDD---------AVVYKLFHANLKLLLVTEGPDGCR 294
+ DI+ +E E + + + + K+ ++++ T+G D
Sbjct: 213 VMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTI 272
Query: 295 YYTKDFSGRVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
T+ L + E +D GAGDAFV G LSQL +D L + +R +
Sbjct: 273 MATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP-------LTECIRAGHY 325
Query: 352 CGALTVMERGA-IPALP 367
++ + G P P
Sbjct: 326 AASIIIRRTGCTFPEKP 342
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-17
Identities = 51/290 (17%), Positives = 101/290 (34%), Gaps = 39/290 (13%)
Query: 92 PGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGA-RTALA 150
GG +V+ +++ G + +G G+D L ILKE ++N + + R
Sbjct: 38 CGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFV 96
Query: 151 FVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHY-GSISLITEPCK 203
++ ++G + + D + K + GS
Sbjct: 97 VLSDDTNGSTMIPE---AGFT--VSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSD 151
Query: 204 SAHIAAAKAAKDAGVVL-SYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262
+ A A + + L L + + D IK +E+E+ +
Sbjct: 152 FKELLRTVKATGAFLGCDNSGEYLNLAV-----EMG---------VDFIKPNEDEVIAIL 197
Query: 263 QGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFV 322
+ + + + + L+V+ G G +V KV+ + TGAGD FV
Sbjct: 198 DEKTNSLEENI-RTLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFV 256
Query: 323 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372
++ L+ + + + L+ A C A VM++ + + EA
Sbjct: 257 GAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SSFDLEAA 297
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 1e-15
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 305
IK +++E+ + D V+ L + ++V+ G DG Y K+ S +
Sbjct: 176 LFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAV 235
Query: 306 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 365
+ + V+ G+GD+ VAG+++ + + A + A ACG T +
Sbjct: 236 NPQGKVVNTVGSGDSTVAGMVA------GIASGLS-IEKAFQQAVACGTATAFDED---- 284
Query: 366 LPTREAV 372
L TR+A+
Sbjct: 285 LATRDAI 291
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 249 DIIKISEEEISFLTQ---GEDPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGR 303
+IK + EE+ L E+P K A ++ ++++ G DG D R
Sbjct: 182 YLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYR 241
Query: 304 VQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363
V+ ++A + G+GDA +AG+ L + + L++ A G ER
Sbjct: 242 VKIPTIQAKNPVGSGDATIAGLAY------GLAKDAP-AAELLKWGMAAGMANAQERMT- 293
Query: 364 PALPTREAV 372
E V
Sbjct: 294 -GHVDVENV 301
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 1e-15
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 305
IK + E+S L + + +L ++ +LV+ DG + + + V
Sbjct: 176 SFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVN 235
Query: 306 GLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA 365
E ++ GAGD+ VAG L+ +L + + L DA+ FA A G+ T G
Sbjct: 236 VPSGEVRNSVGAGDSVVAGFLA------ALQEGKS-LEDAVPFAVAAGSATAFSDG---- 284
Query: 366 LPTREAV 372
TRE V
Sbjct: 285 FCTREEV 291
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 5e-15
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 13/128 (10%)
Query: 249 DIIKISEEEISFLTQGE--DPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRV 304
+IK + E+ L + + + ++ ++V+ G G RV
Sbjct: 200 TVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRV 259
Query: 305 QGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364
+ ++ G+GD+ VAGI S ++L E+ D L+ AN G L E
Sbjct: 260 NIPTISVLNPVGSGDSTVAGITS------AILNHEN-DHDLLKKANTLGMLNAQEAQT-- 310
Query: 365 ALPTREAV 372
Sbjct: 311 GYVNLNNY 318
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-14
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLL--------LVTEGPDGCRYYTKDF 300
+++K +++E+S L E D V A +++ +V+ GP G +
Sbjct: 182 ELVKPNQKELSALVNRELTQPDDVR----KAAQEIVNSGKAKRVVVSLGPQGALGVDSEN 237
Query: 301 SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360
+V V++ GAGD+ V + +L+ + S L + +RF A G+ + +
Sbjct: 238 CIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQ 290
Query: 361 GAIPALPTREAV 372
G L + +
Sbjct: 291 GT--RLCSHDDT 300
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 4e-12
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 12/128 (9%)
Query: 249 DIIKIS-EEEISFLTQGEDPYDDAVVY--KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ 305
+++K + + D V + ++ +V+ T++ ++
Sbjct: 199 NVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVATREGVWLIR 258
Query: 306 G-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364
+++ GAGDA+VAG++ ++ + +F A +
Sbjct: 259 SKEEIDTSHLLGAGDAYVAGMVY------YFIKHGANFLEMAKFGFASALAATRRKE--K 310
Query: 365 ALPTREAV 372
+P EA+
Sbjct: 311 YMPDLEAI 318
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.93 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.93 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.89 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.88 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.87 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.84 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.83 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.83 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.8 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.62 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.61 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.29 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 99.13 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 99.12 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 99.1 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.88 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.83 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.66 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.51 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 98.46 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.31 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 98.06 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 98.04 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.55 |
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=415.59 Aligned_cols=314 Identities=37% Similarity=0.596 Sum_probs=270.1
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|+++++|+|+|++++|++...+..|.. +..+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||++
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~ 79 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVT 79 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBC
T ss_pred CCCCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCc
Confidence 345679999999999999887765543 6678889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+++.+.++.+|+++++.++++|+|++.+++.++++..++++++..+.+++++++|++++.+..+.+.+.+.++++.+++.
T Consensus 80 ~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 159 (338)
T 3ljs_A 80 DGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAA 159 (338)
T ss_dssp TTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHT
T ss_pred eeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHc
Confidence 99998888899999999999999998888777788788988888777899999999998777788889999999999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
|+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++....+.+++++.|++.|++.||||+|++|++++
T Consensus 160 g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~ 239 (338)
T 3ljs_A 160 GAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWY 239 (338)
T ss_dssp TCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHTTTTCCEEEEEETTEEEEEE
T ss_pred CCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHHhcCCCEEEEeeCCCceEEE
Confidence 99999999999988976666778888999999999999999999998766544457888989999999999999999999
Q ss_pred eCCceEEEccccccccCCCCccHHHHHHHHHHHHcC--------------CccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 297 TKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--------------FSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 297 ~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g--------------~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
++++.+++|+++++++|||||||+|+|||+++|++| ++ +++|+++|+++|++++++.|+
T Consensus 240 ~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~A~~~aa~~v~~~Ga 312 (338)
T 3ljs_A 240 TRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRFAAAVGALAVTRQGA 312 (338)
T ss_dssp ESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHHHHHHHGGGC----C
T ss_pred ECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999998 55 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhC
Q 016868 363 IPALPTREAVLNAIHA 378 (381)
Q Consensus 363 ~~~~~~~~~v~~~l~~ 378 (381)
.+++|+++||++++++
T Consensus 313 ~~~~p~~~ev~~~~~~ 328 (338)
T 3ljs_A 313 FTAMPMLSEVLSLIQE 328 (338)
T ss_dssp CCCTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHhh
Confidence 9899999999999875
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-54 Score=401.84 Aligned_cols=312 Identities=27% Similarity=0.421 Sum_probs=281.2
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|+++++|+|+|++++|++...++.|..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 84 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDN 84 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEEC
T ss_pred cccCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCcc
Confidence 45567999999999999998888877777788899999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCc-cccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA-DMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
+++.+.++.+|+++++.++.+|++++.+++.+++ +..+++++++.+.+++++++|++++.+..+...+....+++.+++
T Consensus 85 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T 3pl2_A 85 QYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRAN 164 (319)
T ss_dssp TTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT
T ss_pred ccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHHHHHHHHHH
Confidence 9999888889999999888889998888766655 667888888878889999999999876666666677777777665
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
+.++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++... .+++++.|++.|++.|+||+|++|+++
T Consensus 165 -~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~~~ 241 (319)
T 3pl2_A 165 -RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE--PERAGRALLERGVELAIVKQGPKGVMA 241 (319)
T ss_dssp -CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS--HHHHHHHHHHTTCSEEEEEEETTEEEE
T ss_pred -CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC--HHHHHHHHHhcCCCEEEEEECCCCeEE
Confidence 67789999999999988888888899999999999999999999998753 467788999999999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++
T Consensus 242 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 314 (319)
T 3pl2_A 242 MTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALVASRLECSTAMPTTDEVEAS 314 (319)
T ss_dssp ECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSCSGGGCCCHHHHHHH
T ss_pred EECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCcCCCCCHHHHHHH
Confidence 999889999999999999999999999999999999999 9999999999999999999998889999999999
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 315 l~~ 317 (319)
T 3pl2_A 315 LNQ 317 (319)
T ss_dssp CC-
T ss_pred Hhc
Confidence 875
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-53 Score=397.22 Aligned_cols=310 Identities=28% Similarity=0.413 Sum_probs=270.6
Q ss_pred CCCcEEEEccceeecccCCCCCCccC-CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE-SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|++|+|+|++++|++...++..... .......+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~ 81 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIR 81 (330)
T ss_dssp --CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCT
T ss_pred CCCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCee
Confidence 45689999999999997533322211 11235678999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++.++++|++++.+++...+...++++++....+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 82 ~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g 161 (330)
T 3iq0_A 82 GISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANG 161 (330)
T ss_dssp TEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTT
T ss_pred eEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcC
Confidence 99988888999999999999999776665566777788888887789999999999987666777788899999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|... ..++.+.++++++|++++|++|++.|++.. +.+++++.|++.|++.||||+|++|+++++
T Consensus 162 ~~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~ 238 (330)
T 3iq0_A 162 GVISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHS--TPERAIAGFLEEGVKEVIVKRGNQGASYYS 238 (330)
T ss_dssp CEEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCS--SHHHHHHHHHHHTCSEEEEECGGGCEEEEC
T ss_pred CEEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCC--CHHHHHHHHHHcCCCEEEEEeCCCceEEEE
Confidence 99999999888878654 467788889999999999999999999874 346788889899999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++.+++|+++++++|||||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++++
T Consensus 239 ~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~~~ 311 (330)
T 3iq0_A 239 ANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQ 311 (330)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHHHH
T ss_pred CCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHH
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999986
Q ss_pred C
Q 016868 378 A 378 (381)
Q Consensus 378 ~ 378 (381)
+
T Consensus 312 ~ 312 (330)
T 3iq0_A 312 R 312 (330)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=395.31 Aligned_cols=309 Identities=29% Similarity=0.425 Sum_probs=263.9
Q ss_pred CCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|.++++|+|+|++++|++...++. ......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~ 101 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDC 101 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTCEE
T ss_pred cCCCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 455579999999999999876543 2245667889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCC-CceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDG-EREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~ 214 (381)
+++.+.++.+|+.+++.++.+| ++.+.+++..++...+++++++.+.+++++++|++++.. ..+...+.+.++++.++
T Consensus 102 ~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~ 181 (336)
T 4du5_A 102 SHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMR 181 (336)
T ss_dssp EEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHHHHHHHHHHH
Confidence 9999988899999999998889 445656666777888899888878899999999988754 46666788889999999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceE
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
+.++++++||+.++.+|...+...+.+.++++++|++++|++|++.|+|..+ .+++++.|.+.|++.|+||+|++|++
T Consensus 182 ~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~~ 259 (336)
T 4du5_A 182 AAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT--PEGVARFYRQLGAKLVVVKLGAEGAY 259 (336)
T ss_dssp HTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS--HHHHHHHHHHTTCSEEEEECGGGCEE
T ss_pred HCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC--HHHHHHHHHhcCCCEEEEEecCCceE
Confidence 9999999999999999988777788888999999999999999999998753 46788899999999999999999999
Q ss_pred EEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 295 YYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++++++.+++|+++++ ++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+++|+++||+
T Consensus 260 ~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 332 (336)
T 4du5_A 260 FDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGARAVQVLGDSEGLPTRAELN 332 (336)
T ss_dssp EEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHC------CCCCHHHHH
T ss_pred EEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCccCCCCHHHHH
Confidence 9998889999999997 999999999999999999999999 99999999999999999999998899999998
Q ss_pred HH
Q 016868 374 NA 375 (381)
Q Consensus 374 ~~ 375 (381)
++
T Consensus 333 ~~ 334 (336)
T 4du5_A 333 AA 334 (336)
T ss_dssp CC
T ss_pred hc
Confidence 64
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-54 Score=405.18 Aligned_cols=308 Identities=30% Similarity=0.550 Sum_probs=251.2
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
.++++|+|+|++++|++...+..|..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~ 98 (327)
T 3hj6_A 19 KGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITD 98 (327)
T ss_dssp ---CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCT
T ss_pred cCCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcc
Confidence 45579999999999999988887777778889999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++..+ +|++++..++ +++..++++++..+.+++++++|++++.+..+.+.+.+.++++.++++|
T Consensus 99 ~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g 175 (327)
T 3hj6_A 99 GIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQG 175 (327)
T ss_dssp TCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTT
T ss_pred cEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCC
Confidence 999888889999988765 6888887774 4666777777766778999999999986666667788899999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++.... +++++.|.+.|++.|+||+|++|+++++
T Consensus 176 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~--~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 253 (327)
T 3hj6_A 176 KIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLELGVKAVILTLGEEGVIASD 253 (327)
T ss_dssp CEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS--SGGGGGGTTTTCSEEEEECSTTCEEEEC
T ss_pred CEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHhCCCCEEEEEECCCceEEEe
Confidence 99999999988888776666778888999999999999999999988443 4567778889999999999999999999
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..++|+++||+++++
T Consensus 254 ~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 254 GEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp SSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC--------------------
T ss_pred CCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHhc
Confidence 8889999999999999999999999999999999999 999999999999999999999888999999999875
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=387.85 Aligned_cols=313 Identities=25% Similarity=0.426 Sum_probs=271.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
++++|+|+|++++|++....+.+......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~ 89 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSN 89 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcc
Confidence 34689999999999998766655555567788999999999999999999999999999999999999999999999999
Q ss_pred eeecC-CCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 139 MRFDP-GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 139 v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
+.+.+ +.+|+++++.++.+|++++.+++...++..++++++....+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 90 v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g 169 (332)
T 2qcv_A 90 LVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRND 169 (332)
T ss_dssp EEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTT
T ss_pred eEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCC
Confidence 98775 46899999887777888887776656677788888876778899999999876655556678889999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC-CChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED-PYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
+++++||+.+..+|...+...+.+.++++++|++++|++|++.|++... .+..++++.+++.|++.|+||+|++|++++
T Consensus 170 ~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 249 (332)
T 2qcv_A 170 VKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAY 249 (332)
T ss_dssp CEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEECGGGCEEEE
T ss_pred CEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEEECCcceEEE
Confidence 9999999988888877666777788899999999999999999998752 233567788888999999999999999999
Q ss_pred eC-CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 297 TK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 297 ~~-~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
++ ++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 250 ~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 322 (332)
T 2qcv_A 250 TKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIVVSKHSSSDAMPSVEEIEAL 322 (332)
T ss_dssp ETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHC-----CCCCHHHHHHH
T ss_pred ecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCccCCCCHHHHHHH
Confidence 87 567899999999999999999999999999999999 9999999999999999999998889999999998
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 323 l~~ 325 (332)
T 2qcv_A 323 IEK 325 (332)
T ss_dssp HHH
T ss_pred Hhc
Confidence 864
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-51 Score=384.97 Aligned_cols=310 Identities=23% Similarity=0.278 Sum_probs=268.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
||++|+|+|++++|++....+ +..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 1 m~~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 79 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPEYL-MLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQW 79 (346)
T ss_dssp -CCEEEEECCCEEEEECSTTC-CTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCcEEEeChhhhhhcCCCCC-cccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceE
Confidence 457899999999999974322 2235667889999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEe--cCCCccccCChhccc-hhhcCCccEEEEccccc-cCchhHHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFY--RNPSADMLLQEAELD-LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~ 214 (381)
+... +.+|+++++..+.+++++++.+ +..++...+++++++ .+.+++++++|++++.+ ..+...+.+.++++.++
T Consensus 80 v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~ 158 (346)
T 3ktn_A 80 VGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAH 158 (346)
T ss_dssp EEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHH
Confidence 9875 5799999998876667665554 555667778888887 46789999999998754 35556688899999999
Q ss_pred HCCCeEEEeCCCCCCCCCCH--HHHHHHHHHHhhhCCEEecCHHHHhhccCCC-CC------ChHHHHHHHHh-cCCCEE
Q 016868 215 DAGVVLSYDPNLRLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGE-DP------YDDAVVYKLFH-ANLKLL 284 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~-~~------~~~~~~~~l~~-~g~~~v 284 (381)
+.|+++++||+.+..+|... +...+.+.++++++|++++|++|++.|++.. .. +..++++.|.+ .|++.|
T Consensus 159 ~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~v 238 (346)
T 3ktn_A 159 AYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWF 238 (346)
T ss_dssp HTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEE
T ss_pred HcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEE
Confidence 99999999999998888753 5667888899999999999999999999987 32 23456677776 499999
Q ss_pred EEEecCCc-------eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 016868 285 LVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 285 vvt~G~~G-------~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
|||+|++| ++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++
T Consensus 239 vvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~a~aa~~v 311 (346)
T 3ktn_A 239 AGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS-------LEKAVTFATVNGVLAH 311 (346)
T ss_dssp EEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHT
T ss_pred EEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHh
Confidence 99999998 999988888999999999999999999999999999999999 9999999999999999
Q ss_pred hhcCCCCCCCCHHHHHHHHhC
Q 016868 358 MERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 358 ~~~G~~~~~~~~~~v~~~l~~ 378 (381)
++.|+.+ +|++++|++++++
T Consensus 312 ~~~G~~~-~p~~~ev~~~l~~ 331 (346)
T 3ktn_A 312 TIQGDIP-LTTVKQVNHVLEH 331 (346)
T ss_dssp TSSSSCC-CCCHHHHHHHHHC
T ss_pred ccCCCCC-CCCHHHHHHHHhc
Confidence 9999986 8999999999875
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-51 Score=381.94 Aligned_cols=305 Identities=27% Similarity=0.380 Sum_probs=268.1
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
|+|+|+|++++|++...++ +......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~ 80 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIK 80 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEE
Confidence 5899999999999975433 222445677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEE--ecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCC
Q 016868 141 FDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 141 ~~~~~~t~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g 217 (381)
+.++.+|+++++. ++++|++++.+++..++...++++++..+.+++++++|++++.+ +.+.+.+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (313)
T 2v78_A 81 VDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR- 159 (313)
T ss_dssp EETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-
Confidence 8888899999998 88889998887766667777888888777788999999988754 2455667777777776654
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCC--EEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETAD--IIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++||+.+..+|.+.+..++.+.++++++| ++++|++|++.|++.. +.+++++.|.+.|++.|+||+|++|+++
T Consensus 160 ---~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 234 (313)
T 2v78_A 160 ---SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVT--DPDEAYRKYKELGVKVLLYKLGSKGAIA 234 (313)
T ss_dssp ---EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCC--CHHHHHHHHHHTTEEEEEEECGGGCEEE
T ss_pred ---CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCC--CHHHHHHHHHhCCCCEEEEEECCCCcEE
Confidence 89999888888766667778888999999 9999999999999864 3467788888999999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+.+++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 235 ~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~ 307 (313)
T 2v78_A 235 YKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLVITVRGDNELTPTLEDAERF 307 (313)
T ss_dssp EETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHH
T ss_pred eeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence 988888899999999999999999999999999999999 9999999999999999999999888999999999
Q ss_pred HhCC
Q 016868 376 IHAP 379 (381)
Q Consensus 376 l~~~ 379 (381)
++++
T Consensus 308 ~~~~ 311 (313)
T 2v78_A 308 LNEF 311 (313)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8765
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=376.73 Aligned_cols=300 Identities=30% Similarity=0.429 Sum_probs=262.5
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
|+|+|+|++++|+++..++ +......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~ 80 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEE
Confidence 5899999999999975433 222345677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCCCe
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
+.++ +|+++++.++.+|++++.+++...+...++++++..+.+++++++|++++.. +.+.+.+.+.++++.+++.+++
T Consensus 81 ~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~ 159 (309)
T 1v1a_A 81 RAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVR 159 (309)
T ss_dssp ECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred EcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCE
Confidence 8888 9999999988889998887766666777888888777789999999998765 3566778888999999999999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeC-
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK- 298 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~- 298 (381)
+++||+.+..+|. .+...+.+.++++++|++++|++|++.|++.. +++++ +.|++.|+||+|++|+++ .+
T Consensus 160 v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~---~~g~~~vvvt~G~~G~~~-~~~ 230 (309)
T 1v1a_A 160 VSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALR---ALSAPEVVLKRGAKGAWA-FVD 230 (309)
T ss_dssp EEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHH---HTCCSEEEEECGGGCEEE-EET
T ss_pred EEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHH---hcCCCEEEEEecCCCeeE-ecC
Confidence 9999998888884 55667788889999999999999999999864 34444 789999999999999998 65
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+++++++++++
T Consensus 231 ~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 303 (309)
T 1v1a_A 231 GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLKA 303 (309)
T ss_dssp TEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTTCC--
T ss_pred CcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHHHHhh
Confidence 677899999999999999999999999999999999 9999999999999999999998888999999887654
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=389.04 Aligned_cols=303 Identities=33% Similarity=0.532 Sum_probs=259.6
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
++|++|+|+|++++|++... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++
T Consensus 22 ~~m~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~ 94 (339)
T 1tyy_A 22 KAMNKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVT 94 (339)
T ss_dssp ---CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECT
T ss_pred cccCCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCch
Confidence 33458999999999999863 23456789999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCC
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g 217 (381)
++.+.++.+|+++++.++++|+|++.+++..+++..++++ ..+.+++++++|++++.+..+.+.+.+.++++.+++.+
T Consensus 95 ~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g 172 (339)
T 1tyy_A 95 FLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAG 172 (339)
T ss_dssp TEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTT
T ss_pred heEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcC
Confidence 9998888899999998888899988777655676666655 23567889999998876666777788889999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
+++++||+.+..+|.+.+...+.+.++++++|++++|++|++.|++..+. +++++.|.+.|++.||||+|++|+++++
T Consensus 173 ~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~--~~~~~~l~~~g~~~VvvT~G~~G~~~~~ 250 (339)
T 1tyy_A 173 GYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLGCDTTIISLGADGALLIT 250 (339)
T ss_dssp CEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGTCSCEEEECGGGCEEEES
T ss_pred CEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHHcCCCEEEEEECCCceEEEe
Confidence 99999999888888766667778888999999999999999999987543 4566777788999999999999999998
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHcC-----CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-----FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g-----~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v 372 (381)
+++.+++|+++++++||+||||+|+|+|+++|++| .+ +++|+++|+++|++++++.|+.+++|+++++
T Consensus 251 ~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev 323 (339)
T 1tyy_A 251 AEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAMAVTAKGAMTALPFPDQL 323 (339)
T ss_dssp SSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHHGGGSSSTTTTCCCHHHH
T ss_pred CCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 88888999999999999999999999999999997 66 9999999999999999999998888999999
Q ss_pred HHHHhC
Q 016868 373 LNAIHA 378 (381)
Q Consensus 373 ~~~l~~ 378 (381)
++++++
T Consensus 324 ~~~l~~ 329 (339)
T 1tyy_A 324 NTFLSS 329 (339)
T ss_dssp HHHHC-
T ss_pred HHHHhc
Confidence 998865
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=375.91 Aligned_cols=304 Identities=28% Similarity=0.446 Sum_probs=266.1
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
++|+|+|++++|++...++. ..+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++.
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 80 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCE
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEE
Confidence 58999999999999854332 22345677899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCC--ceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCC
Q 016868 141 FDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g 217 (381)
+.++.+|+++++.++++|+ +++.+++..++...++++++..+.+++++++|++++.+ +.+.+.+.+.++++.+++.
T Consensus 81 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~- 159 (311)
T 2dcn_A 81 IDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR- 159 (311)
T ss_dssp EETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-
T ss_pred EcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh-
Confidence 8888899999999988898 88887766667777888888777789999999988754 3556667778888877654
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++||+.+..+|. .+...+.+.++++ ++|++++|++|++.|++.. +.+++++.|.+. ++.|+||+|++|+++
T Consensus 160 ---~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~-~~~vvvt~G~~G~~~ 232 (311)
T 2dcn_A 160 ---SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGES--DPDKAAKAFSDY-AEIIVMKLGPKGAIV 232 (311)
T ss_dssp ---EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCC--CHHHHHHHHTTT-EEEEEEEEETTEEEE
T ss_pred ---CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCC--CHHHHHHHHHHh-CCEEEEEECCCCcEE
Confidence 899998888886 5556677888999 9999999999999999874 346778888888 899999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+.+++|++++++++
T Consensus 233 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~ 305 (311)
T 2dcn_A 233 YYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIETF 305 (311)
T ss_dssp EETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred EeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence 998888899999999999999999999999999999999 9999999999999999999999888999999999
Q ss_pred HhCCC
Q 016868 376 IHAPV 380 (381)
Q Consensus 376 l~~~~ 380 (381)
++++.
T Consensus 306 ~~~~~ 310 (311)
T 2dcn_A 306 LREMK 310 (311)
T ss_dssp HHHC-
T ss_pred HHhcc
Confidence 88753
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-50 Score=376.70 Aligned_cols=306 Identities=24% Similarity=0.342 Sum_probs=259.1
Q ss_pred CCCcEEEEccceeecccCCCCCCcc-----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
++++|+|||++++|++......... ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 3578999999999996432211000 11356789999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
|+++++.+.++.+|+.++++++++|+|++.+++. .+...+++++++.+.+.+++++|++++........+.+.++++.+
T Consensus 84 V~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 162 (325)
T 3h49_A 84 IDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA 162 (325)
T ss_dssp CBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHH
T ss_pred CceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHHHHHH
Confidence 9999999888889999999999999999887643 344557777877778899999999986543334557788999999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCce
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGC 293 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 293 (381)
++.+ .+++|++.++.+|... +.+.++++++|++++|++|++.|++... .+++++.|.+.|++.|+||+|++|+
T Consensus 163 ~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l~~~g~~~vvvt~G~~G~ 235 (325)
T 3h49_A 163 KARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET--LDEIADCFLACGVKTVVIKTGKDGC 235 (325)
T ss_dssp HHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS--HHHHHHHHHTTTCSEEEEECTTSCE
T ss_pred HhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC--HHHHHHHHHHcCCCEEEEEeCCCCe
Confidence 9988 6778887777777543 3456788999999999999999998764 4677888889999999999999999
Q ss_pred EEEeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 016868 294 RYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAV 372 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v 372 (381)
+++++++.+++|++++ +++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+++||
T Consensus 236 ~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 236 FIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp EEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred EEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999988889999886 8999999999999999999999999 9999999999999999999999889999999
Q ss_pred HHHHhCC
Q 016868 373 LNAIHAP 379 (381)
Q Consensus 373 ~~~l~~~ 379 (381)
+++++++
T Consensus 309 ~~~l~~~ 315 (325)
T 3h49_A 309 EQLLEEY 315 (325)
T ss_dssp HTC----
T ss_pred HHHHHhc
Confidence 9988764
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=372.18 Aligned_cols=293 Identities=27% Similarity=0.346 Sum_probs=257.3
Q ss_pred CCCcEEEEccceeecccCCCCCCcc-----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~-----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
||++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 1 Mm~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~g 80 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAH 80 (304)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTT
T ss_pred CCCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcC
Confidence 4578999999999999887776643 23457889999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
|+++++.+.++.+|+.+++.++++|++++..+ .+++..+++++++. +.+++++++++++ +.+.+.+.++++
T Consensus 81 v~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~ 153 (304)
T 3ry7_A 81 IDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EVPIPAIISAFE 153 (304)
T ss_dssp CBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TSCHHHHHHHHH
T ss_pred CcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CCCHHHHHHHHH
Confidence 99999998888899999999999999998876 45666788877653 4688999998864 345678889999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEe
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~ 288 (381)
.+++.++++++||+.... .+.++++++|++++|++|++.|++....+. .++++.|++.|++.|+||+
T Consensus 154 ~a~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 223 (304)
T 3ry7_A 154 IAKAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITL 223 (304)
T ss_dssp HHHHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEe
Confidence 999999999999975322 234678899999999999999999875433 4566788889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcC-CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-FSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g-~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~ 367 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++| ++ +++|+++|+++|++++++.|+.+++|
T Consensus 224 G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~A~~~aa~~~~~~G~~~~~p 296 (304)
T 3ry7_A 224 GKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDFGNKASSLTVQKHGAQASIP 296 (304)
T ss_dssp GGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHHHHHHHHTTSCCCCTGGGCC
T ss_pred CCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhCCCCccccCC
Confidence 99999999988999999999999999999999999999999999 99 99999999999999999999998899
Q ss_pred CHHHHHHH
Q 016868 368 TREAVLNA 375 (381)
Q Consensus 368 ~~~~v~~~ 375 (381)
+++||+++
T Consensus 297 ~~~ev~~~ 304 (304)
T 3ry7_A 297 LLEEVNQV 304 (304)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999763
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=368.76 Aligned_cols=297 Identities=34% Similarity=0.561 Sum_probs=260.6
Q ss_pred CCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
||+|+|+|++++|++...++.. .+...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||+++++
T Consensus 1 M~~v~viG~~~iD~~~~~~g~~-~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v 79 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEGDL-KDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGI 79 (313)
T ss_dssp -CEEEEESCCEEEEEESSSSCT-TTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEECceeeeeecCCCCCc-ccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccce
Confidence 4689999999999998755432 245667889999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~ 219 (381)
.+.++.+|+++++.++. |++++..+ ...+...+++++++.+.+++++++|++++.+..+.+.+.+.++++.++ .+++
T Consensus 80 ~~~~~~~T~~~~~~~~~-g~~~~~~~-~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~ 156 (313)
T 3ewm_A 80 VKDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSL 156 (313)
T ss_dssp EEESSSCCEEEEEECSS-SSCEEEEC-CSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBE
T ss_pred eecCCCCceEEEEEecC-CCcceEee-ccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCE
Confidence 98888899999998865 99998887 344556788888887788899999999987766777888899999888 4799
Q ss_pred EEEeCCCCCCCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeC
Q 016868 220 LSYDPNLRLPLWP-SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298 (381)
Q Consensus 220 v~~D~~~~~~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 298 (381)
+++||+.+..+|. ..+...+.+.++++++|++++|++|++.|++.... ..+.+.||||+|++|++++++
T Consensus 157 v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~----------~~~~~~vviT~G~~G~~~~~~ 226 (313)
T 3ewm_A 157 IAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE----------VKGSMLTAITLGPKGCRLIKN 226 (313)
T ss_dssp EEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC----------CCCSSEEEEECGGGEEEEEET
T ss_pred EEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc----------ccCceEEEEEECCCCeEEEEC
Confidence 9999998888887 45667788889999999999999999999875432 134667899999999999999
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHH--cCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHH
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLS--TDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 376 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~--~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l 376 (381)
++.+++|+++++++||+||||+|+|+|+++|+ +|++ +++|+++|+++|++++++.|+.. +|+++||++++
T Consensus 227 ~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~-~p~~~ev~~~l 298 (313)
T 3ewm_A 227 ETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALSTQKRGAWS-TPRKDELLKYK 298 (313)
T ss_dssp TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHTTSCSSCC-CCCHHHHTTSH
T ss_pred CeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHHccCCCCC-CCCHHHHHHHH
Confidence 98899999999999999999999999999999 9999 99999999999999999999964 89999999887
Q ss_pred hC
Q 016868 377 HA 378 (381)
Q Consensus 377 ~~ 378 (381)
++
T Consensus 299 ~~ 300 (313)
T 3ewm_A 299 EA 300 (313)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-49 Score=370.16 Aligned_cols=300 Identities=25% Similarity=0.407 Sum_probs=263.8
Q ss_pred cccccccCCCCCCCCccCCCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHc--CCceEEEeecC
Q 016868 40 NVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL--GGSSAFIGKVG 117 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~L--G~~v~li~~vG 117 (381)
.+-||+|+ +++. ++|+|+|++++|++... + ...+...+||++.|+|++|++| |.++.++|.+|
T Consensus 12 ~~~~~~y~---~~~m------~~i~viG~~~iD~~~~~-~-----~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG 76 (328)
T 4e69_A 12 DLGTENLY---FQSM------MHILSIGECMAELAPAD-L-----PGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIG 76 (328)
T ss_dssp CCCCBCSS---CBSS------CEEEEESCCEEEEEECS-S-----TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEEC
T ss_pred ccCccccc---cccC------CcEEEecCcEEEEecCC-C-----CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeC
Confidence 46689999 4433 68999999999999862 1 1456789999999999999999 89999999999
Q ss_pred CChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccc-cCChhccchhhcCCccEEEEcccc
Q 016868 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM-LLQEAELDLSLITKAKIFHYGSIS 196 (381)
Q Consensus 118 ~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~ 196 (381)
+|.+|+++++.|++.||+++++.+.++.+|+.+++.++ +|+|++.+++...... .++..++..+.+++++++|++++.
T Consensus 77 ~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 155 (328)
T 4e69_A 77 DDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGIT 155 (328)
T ss_dssp SSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHH
T ss_pred CCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCch
Confidence 99999999999999999999999988889999999998 9999998876654432 334444445778999999999864
Q ss_pred c--cCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHH
Q 016868 197 L--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 274 (381)
Q Consensus 197 ~--~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 274 (381)
+ ..+.+.+.+.++++.+++.++++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++.. +.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~--~~~~~~~ 233 (328)
T 4e69_A 156 LAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDA--GPDATAD 233 (328)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCS--SHHHHHH
T ss_pred hhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCC--CHHHHHH
Confidence 3 35667788889999999999999999998888898777788889999999999999999999999875 4477888
Q ss_pred HHHhcCCCEEEEEecCCceEEEeCCceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 016868 275 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353 (381)
Q Consensus 275 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~A 353 (381)
.|.+.|++.||||+|++|++++++++.+++|+++ ++++||+||||+|+|+|+++|++|++ +++|+++|+++|
T Consensus 234 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~a 306 (328)
T 4e69_A 234 RYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------LETAIAAAAALA 306 (328)
T ss_dssp HHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHH
Confidence 9999999999999999999999999889999986 79999999999999999999999999 999999999999
Q ss_pred HHHhhhcCCCC
Q 016868 354 ALTVMERGAIP 364 (381)
Q Consensus 354 a~~~~~~G~~~ 364 (381)
++++++.|+.+
T Consensus 307 a~~v~~~Ga~~ 317 (328)
T 4e69_A 307 GQVVQGKGALV 317 (328)
T ss_dssp HHHHTSSSSSC
T ss_pred HHHHccCCCcC
Confidence 99999999875
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=372.93 Aligned_cols=310 Identities=19% Similarity=0.271 Sum_probs=254.8
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+||.+|++||++++|+.+. .+.|..+...+...+||++.|+|++|+|||.++.++|.||+|.+|+++++.|+++||+++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~-~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~ 100 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQ-QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTA 100 (351)
T ss_dssp ---CEEEEECCCEEEEECC-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECT
T ss_pred hccCCEEEEcceeEEecCC-CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcc
Confidence 4667999999999999876 345666677888999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc-hhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-LSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~ 215 (381)
++...++..|..++...+..+++.+.+++...+...+...++. .+.+++++++|++++.+ ..+...+.+.++++.+++
T Consensus 101 ~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~ 180 (351)
T 4gm6_A 101 FVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKR 180 (351)
T ss_dssp TEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHHHHHHH
Confidence 9998888666666666667777888887666655455555544 35789999999998755 466678889999999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhc--------CCCEEEEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA--------NLKLLLVT 287 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~--------g~~~vvvt 287 (381)
+|++|+|||++|+.+|. .+..++.+.++++++|++++|++|++.+++......+ ..+.+.+. +.+.++++
T Consensus 181 ~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 258 (351)
T 4gm6_A 181 NGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTD-YYQAMHDKYPNIELFYATKRTVIS 258 (351)
T ss_dssp TTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSC-HHHHHHHHCTTCCEEEEEEEEEEE
T ss_pred cCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhH-HHHHHHhhhhhhhhhhccccceee
Confidence 99999999999999995 5677888999999999999999999999987654332 22232221 22334555
Q ss_pred ec--CCceEEEeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 288 EG--PDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 288 ~G--~~G~~~~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
.+ ..|+.++..++.++.++.++ +++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~A~aaaal~v~~~Ga~~ 331 (351)
T 4gm6_A 259 ASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDETVKFATAAAGLKHSIHGDIN 331 (351)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred eccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCCCC
Confidence 44 34667788888888888775 7999999999999999999999999 99999999999999999999998
Q ss_pred CCCCHHHHHHHHhC
Q 016868 365 ALPTREAVLNAIHA 378 (381)
Q Consensus 365 ~~~~~~~v~~~l~~ 378 (381)
++| .+||++++.+
T Consensus 332 ~~~-~~ev~~~l~~ 344 (351)
T 4gm6_A 332 PFD-EKTIADFAAD 344 (351)
T ss_dssp CCC-HHHHHHHHHC
T ss_pred CCC-HHHHHHHHhC
Confidence 765 6789998864
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-49 Score=366.05 Aligned_cols=297 Identities=25% Similarity=0.336 Sum_probs=256.2
Q ss_pred CCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
+++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~g 81 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDN 81 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTT
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcC
Confidence 34568999999999999887766543 23457788999999999999999999999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
|+++++.+.++.+|+.++++++++|++++.++ .+++..+++++++. +.+++++++++++. .+.+.+..+++
T Consensus 82 v~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~ 154 (309)
T 1rkd_A 82 IDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SPLESVMAAAK 154 (309)
T ss_dssp EECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SCHHHHHHHHH
T ss_pred CCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHH
Confidence 99999988888899999999998899998776 45566677777653 45778999998642 34567788899
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---hHHHHHHHHhcCCCEEEEEe
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt~ 288 (381)
.+++.++++++||+.... | ..++++++|++++|++|++.|++....+ ..++++.|.+.|++.|+||+
T Consensus 155 ~a~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 224 (309)
T 1rkd_A 155 IAHQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITL 224 (309)
T ss_dssp HHHHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999986532 2 1256789999999999999999876433 24556788889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+...+|+
T Consensus 225 G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~ 297 (309)
T 1rkd_A 225 GSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPW 297 (309)
T ss_dssp GGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCC
T ss_pred CCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHcCCCCccCCCCC
Confidence 9999999988888899999999999999999999999999999999 999999999999999999999878899
Q ss_pred HHHHHHHHhC
Q 016868 369 REAVLNAIHA 378 (381)
Q Consensus 369 ~~~v~~~l~~ 378 (381)
++++++++++
T Consensus 298 ~~ev~~~~~~ 307 (309)
T 1rkd_A 298 REEIDAFLDR 307 (309)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998864
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=364.43 Aligned_cols=284 Identities=25% Similarity=0.284 Sum_probs=246.7
Q ss_pred ccCCCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHH
Q 016868 55 KETRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILK 130 (381)
Q Consensus 55 ~~~~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~ 130 (381)
+.++||++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+
T Consensus 14 ~~~~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~ 93 (310)
T 3go6_A 14 NVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLR 93 (310)
T ss_dssp -----CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHH
T ss_pred ccccccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHH
Confidence 33457789999999999999887776543 23467889999999999999999999999999999999999999999
Q ss_pred HCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 131 ENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 131 ~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
+.||+++++... +.+|+.++++++++|+++++.++ +++..++ ++ .+.+++++++++++ +.+.+.+.+++
T Consensus 94 ~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~--~~-~~~l~~~~~v~~~~-----~~~~~~~~~~~ 162 (310)
T 3go6_A 94 ANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP--GANAHLT--PV-PSAVANCDVLLTQL-----EIPVATALAAA 162 (310)
T ss_dssp HTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--GGGGGCC--CC-TTTTTTCSEEEECS-----SSCHHHHHHHH
T ss_pred HcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--ChhhhHH--HH-HHHhhcCCEEEECC-----CCCHHHHHHHH
Confidence 999999999755 45999999999999999988873 4554555 44 46788999999875 33567888999
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecC
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGP 290 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 290 (381)
+.+++.++++++||+++.. .++.+.++++++|++++|++|++.|++. ++.|+||+|+
T Consensus 163 ~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~----------------~~~vvvt~G~ 219 (310)
T 3go6_A 163 RAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP----------------PTHFVITLGV 219 (310)
T ss_dssp HHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------------CSEEEEECGG
T ss_pred HHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC----------------CCEEEEEECC
Confidence 9999999999999985432 2456778899999999999999999874 6889999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc----CCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST----DFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~----g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
+|++++++++.+++|+++++++||+||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+++
T Consensus 220 ~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a~~~A~~~aa~~v~~~G~~~~~ 292 (310)
T 3go6_A 220 RGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRALRRACAAGALATLVSGVGDCA 292 (310)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHHHHHHHHHHHHHTTSSCSTTCC
T ss_pred CCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999989999999999999999999999999999999 887 9999999999999999999999889
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|+++||++++++.
T Consensus 293 p~~~ev~~~l~~~ 305 (310)
T 3go6_A 293 PAAAAIDAALRAN 305 (310)
T ss_dssp CCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999875
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-49 Score=368.10 Aligned_cols=290 Identities=23% Similarity=0.327 Sum_probs=249.5
Q ss_pred CCCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcC----CceEEEeecCCChHHHHHHHHHHHCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG----GSSAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG----~~v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
+|+++|+|+|++++|++... ..+...+||++.|+|++|++|| .++.++|.+|+|.+|+++++.|++.|
T Consensus 2 ~m~~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~G 73 (319)
T 3lhx_A 2 SLSKKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGEN 73 (319)
T ss_dssp --CEEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTT
T ss_pred CccCceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 45568999999999998753 2457889999999999999999 89999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCC-ccccCChhccc--hhhcCCccEEEEccccc--cCchhHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPS-ADMLLQEAELD--LSLITKAKIFHYGSISL--ITEPCKSAHIA 208 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~ 208 (381)
|+++++.+.++.+|+++++.++++|+|++.+++... ++..+++++++ .+.+++++++|++++.+ ..+.+.+.+.+
T Consensus 74 V~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~ 153 (319)
T 3lhx_A 74 VDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLS 153 (319)
T ss_dssp EECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHH
T ss_pred CCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHH
Confidence 999999998888999999999989999998876543 33445554443 25688999999998654 35666788899
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEe
Q 016868 209 AAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 209 ~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~ 288 (381)
+++.+++.++++++||+.++.+|.+.+...+.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.||||+
T Consensus 154 ~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~ 231 (319)
T 3lhx_A 154 LLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ--PVEDVIARTHNAGVKEVVVKR 231 (319)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC--CHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC--CHHHHHHHHHhcCCCEEEEEE
Confidence 999999999999999998888898887888889999999999999999999999874 347788899999999999999
Q ss_pred cCCceEEEeCCceE-EEccc---cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 289 GPDGCRYYTKDFSG-RVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 289 G~~G~~~~~~~~~~-~~~~~---~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
|++|++++++++.+ ++|++ +++++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+..
T Consensus 232 G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 232 GADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AENAAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp TTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSC
T ss_pred CCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhhhccCCCcC
Confidence 99999999888655 88886 678999999999999999999999999 99999999999999999999874
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-49 Score=371.68 Aligned_cols=301 Identities=23% Similarity=0.332 Sum_probs=261.6
Q ss_pred CCCcEEEEccceeecccCCCC-------CCccCC---------------CCccccCCChHHHHHHHHHHcCCceEEEeec
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG-------LSLAES---------------PAFKKAPGGAPANVAVGIARLGGSSAFIGKV 116 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~-------~~~~~~---------------~~~~~~~GG~~~NvA~~la~LG~~v~li~~v 116 (381)
++++|+|+|++++|++..++. .+.... ......+||++.|+|++|++||.++.++|.+
T Consensus 24 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~v 103 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNV 103 (352)
T ss_dssp CSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCC
T ss_pred CcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 347899999999999988875 222210 1335789999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEcccc
Q 016868 117 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 196 (381)
Q Consensus 117 G~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 196 (381)
|+|.+|+++++.|++.||+++++.+.++.+|+.++++++++|+|++..+ .++...++++++..+.+++++++|++++.
T Consensus 104 G~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~ 181 (352)
T 4e3a_A 104 AADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYL 181 (352)
T ss_dssp CSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGG
T ss_pred CCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeee
Confidence 9999999999999999999999988778899999999999999998876 45666788888888889999999999987
Q ss_pred ccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhccCCCCCChHHHHH
Q 016868 197 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVY 274 (381)
Q Consensus 197 ~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 274 (381)
+..+.+.+.+.++++.+++.|+++++||.... ..+..++.+.++++ ++|++++|++|++.|++..+ .+++++
T Consensus 182 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~--~~~a~~ 255 (352)
T 4e3a_A 182 WDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDD--FEEALN 255 (352)
T ss_dssp GSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSC--HHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCC--HHHHHH
Confidence 66677788899999999999999999996311 12345677888998 89999999999999998754 356677
Q ss_pred HHHhcCCCEEEEEecCCceEEEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 016868 275 KLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 353 (381)
Q Consensus 275 ~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~A 353 (381)
.+.+ +++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|
T Consensus 256 ~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~-------l~~a~~~A~~aA 327 (352)
T 4e3a_A 256 RIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS-------LEDCGKLGCLAA 327 (352)
T ss_dssp HHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHH
T ss_pred HHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 6655 7899999999999999999999999999986 899999999999999999999999 999999999999
Q ss_pred HHHhhhcCCCCCCCCHHHHHHH
Q 016868 354 ALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 354 a~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+.++++.|+.+..|.++++++.
T Consensus 328 a~~v~~~G~~~~~~~~~~~~~~ 349 (352)
T 4e3a_A 328 GIVIQQIGPRPMTSLSEAAKQA 349 (352)
T ss_dssp HHHTTSSSSSCSSCHHHHHHHT
T ss_pred HHHHcCCCCCCCcCHHHHHHHh
Confidence 9999999999988888877653
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=369.44 Aligned_cols=293 Identities=24% Similarity=0.308 Sum_probs=255.4
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GV 107 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGI 107 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTE
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 3468999999999999887765543 234567889999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
+++++.+.++.+|++++++++++|+++++.++. .+..++++++..+.+++++++|++++. ++...++++.++
T Consensus 108 d~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~--~~~~~~~~~l~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~ 179 (343)
T 2rbc_A 108 DTSGMTVAPGARSALSTIIIDNRGERLIVPFYD--HRLHEKKRACTPEDIALFDAVLVDVRW------PELALDVLTVAR 179 (343)
T ss_dssp ECTTCEEETTCCCEEEEEEECTTSCEEEEEECC--GGGGSSCCCCCHHHHTTCSEEEECSSS------HHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCCceEEEEECCCCCEEEEEcCC--CcccCChhHhcHhhhCCCCEEEEcCCC------HHHHHHHHHHHH
Confidence 999999888889999999999899999876644 444566666666678899999998753 246778889999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHH-HhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCC-CEEEEEecCCc
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILS-IWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL-KLLLVTEGPDG 292 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G 292 (381)
+.++++++||... .+.+.+ +++++|++++|++|++.|++.. +.+++++.|.+.|+ +.||||+|++|
T Consensus 180 ~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~--~~~~~~~~l~~~g~~~~VvvT~G~~G 247 (343)
T 2rbc_A 180 ALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLE--TVKDMLPVLHARYPQTFIAVTAGPAG 247 (343)
T ss_dssp HTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS--SHHHHHHHHHHHSTTSEEEEECGGGC
T ss_pred HCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCC--CHHHHHHHHHHhCCCceEEEEECCcc
Confidence 9999999999631 234556 8899999999999999999875 34677888989999 99999999999
Q ss_pred eEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 293 CRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 293 ~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+++++++ +.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+.+++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 320 (343)
T 2rbc_A 248 CWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSVAAALKCTVFGGRIGAPTRE 320 (343)
T ss_dssp EEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSGGGGCCCHH
T ss_pred eEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCccCCCCHH
Confidence 9999887 78899999999999999999999999999999999 99999999999999999999987789999
Q ss_pred HHHHHHhC
Q 016868 371 AVLNAIHA 378 (381)
Q Consensus 371 ~v~~~l~~ 378 (381)
++++++++
T Consensus 321 ev~~~l~~ 328 (343)
T 2rbc_A 321 ETEEAMRQ 328 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998864
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-49 Score=368.40 Aligned_cols=299 Identities=19% Similarity=0.212 Sum_probs=256.6
Q ss_pred CCCCcEEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 58 RESPLVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.++++|+|+|++++|++...++.|... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 345799999999999998877766432 12467899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+++++...++.+|+.++++++++|++++.+. ++.+...++++.+. .+.+..++++++++.. + +.+..+++
T Consensus 84 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~l~~- 155 (328)
T 3kzh_A 84 HMDDSMVIEGGSTPTYLAILDENGEMVSAIA-DMKSIGAMNTDFIDSKREIFENAEYTVLDSDN-----P-EIMEYLLK- 155 (328)
T ss_dssp ECTTCEECTTCCCCEEEEEECTTSCEEEEEE-ECGGGGGCCHHHHHHTHHHHHTCSEEEEESSC-----H-HHHHHHHH-
T ss_pred CccceEEeCCCCCeeEEEEEcCCCCEEEEEE-chhhhhhCCHHHHHHHHHhhccCCEEEEeCCc-----H-HHHHHHHH-
Confidence 9999988888899999999999999988553 24555567776654 2567889999987632 2 56666666
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G 289 (381)
+++.++++++||+. ....+.+.++++++|++++|++|++.|++....+. .++++.|.+.|++.|+||+|
T Consensus 156 a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 227 (328)
T 3kzh_A 156 NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLD 227 (328)
T ss_dssp HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECG
T ss_pred HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 88899999999963 22344566788999999999999999999765433 35667888899999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.++.|++
T Consensus 228 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~~~~~ 300 (328)
T 3kzh_A 228 ADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAMTMSNITISHEETIHPDMAL 300 (328)
T ss_dssp GGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSCTTCSH
T ss_pred CCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCCCCcCCH
Confidence 999999998888999999999999999999999999999999999 9999999999999999999999899999
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
+++++++++.
T Consensus 301 ~~v~~~~~~~ 310 (328)
T 3kzh_A 301 DTVLAKLEKT 310 (328)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhhhc
Confidence 9999999864
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=362.02 Aligned_cols=281 Identities=21% Similarity=0.264 Sum_probs=247.2
Q ss_pred CCCcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
|+|+|+|+|++++|++..++..|... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||
T Consensus 1 M~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv 80 (299)
T 3ikh_A 1 MSLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPL 80 (299)
T ss_dssp -CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSC
T ss_pred CCceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 45789999999999999888776542 23567899999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+++++. .++.+|+.++++++++|++++..+ .+++..+++++++ .+.+++++++++++. .+.+.+.++++.
T Consensus 81 ~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~-----~~~~~~~~~~~~ 152 (299)
T 3ikh_A 81 MLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGN-----FSLDKTRALFQY 152 (299)
T ss_dssp EEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSC-----SCHHHHHHHHHH
T ss_pred ceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCC-----CCHHHHHHHHHH
Confidence 999885 567799999999999999998776 4566668887765 346789999998763 245778899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCc
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
+++.++++++||+... +.+.++++++|++++|++|++.|++ .|++.|+||+|++|
T Consensus 153 a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g---------------~g~~~vvvt~G~~G 207 (299)
T 3ikh_A 153 ARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP---------------YGVKTLVITQGAAG 207 (299)
T ss_dssp HHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC---------------CSCSEEEEECGGGC
T ss_pred HHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc---------------CCCCEEEEEECCCc
Confidence 9999999999997542 2345678999999999999999987 68899999999999
Q ss_pred eEEEeCCceEEEccccccccCCCCccHHHHH-HHHHHHHcCCccccchHHHHH-HHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 293 CRYYTKDFSGRVQGLKVEAVDATGAGDAFVA-GILSQLSTDFSLLQKEDQLRD-ALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 293 ~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a-g~l~~l~~g~~~~~~~~~l~~-al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
++++++++.+++|+++++++||+||||+|+| +|+++|++|++ +++ |+++|+++|++++++.|+.+++|+++
T Consensus 208 ~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ 280 (299)
T 3ikh_A 208 AWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASRAAAITVSRRGTLSAFPGSR 280 (299)
T ss_dssp EEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHHHHSSSSTTTSCCHH
T ss_pred eEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCcccccCCCHH
Confidence 9999988899999999999999999999999 99999999999 999 99999999999999999998899999
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
||++++++.
T Consensus 281 ev~~~l~~~ 289 (299)
T 3ikh_A 281 ELAALLTTD 289 (299)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhc
Confidence 999998753
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=359.94 Aligned_cols=289 Identities=26% Similarity=0.377 Sum_probs=247.6
Q ss_pred CcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~ 85 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDINI 85 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCBC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCcc
Confidence 47999999999999877766543 23457788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHC
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 216 (381)
+++...++.+|+.++++++++|++++..+. +++..+++++++. .+++++|+++. . ++.+.++++.+++.
T Consensus 86 ~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~~~-----~-~~~~~~~~~~a~~~ 154 (302)
T 2c4e_A 86 SKLYYSEEEETPKAWIFTDKDNNQITFFLW--GAAKHYKELNPPN---FNTEIVHIATG-----D-PEFNLKCAKKAYGN 154 (302)
T ss_dssp TTCEECSSSCCCEEEEEECSSCCEECCEEC--GGGGGGGGCCCCC---CCEEEEEECSS-----C-HHHHHHHHHHHBTT
T ss_pred cceEeeCCCCCceEEEEECCCCCEEEEEeC--ChhhhCCHhhcCc---ccCCEEEEeCC-----C-cHHHHHHHHHHHhc
Confidence 999888888899999999889999887763 3554566655543 67899998753 1 26778889999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEE
Q 016868 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYY 296 (381)
Q Consensus 217 g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 296 (381)
+ ++++||+.+...|. .+.+.++++++|++++|++|++.|++....+.. .|++. ++.|+||+|++|++++
T Consensus 155 g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~~~-~~~vvvt~G~~G~~~~ 223 (302)
T 2c4e_A 155 N-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID----DYLER-VDALIVTKGSKGSVIY 223 (302)
T ss_dssp B-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH----HHHTT-CSEEEEECGGGCEEEE
T ss_pred C-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH----HHHhc-CCEEEEEECCCceEEE
Confidence 9 99999985443332 345677889999999999999999876544322 66677 9999999999999999
Q ss_pred eCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 297 TKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 297 ~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
++++.+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+...+|++++++++
T Consensus 224 ~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~ 296 (302)
T 2c4e_A 224 TKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFVVEAKGCQTNLPTWDKVVER 296 (302)
T ss_dssp CSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred eCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccccccccCCCHHHHHHH
Confidence 88888899999998 999999999999999999999999 9999999999999999999998888999999998
Q ss_pred HhC
Q 016868 376 IHA 378 (381)
Q Consensus 376 l~~ 378 (381)
+++
T Consensus 297 ~~~ 299 (302)
T 2c4e_A 297 LEK 299 (302)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=361.76 Aligned_cols=295 Identities=25% Similarity=0.354 Sum_probs=251.1
Q ss_pred CCCCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHC
Q 016868 57 TRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKEN 132 (381)
Q Consensus 57 ~~~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~ 132 (381)
|+++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~ 100 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQN 100 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTT
T ss_pred ccccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHc
Confidence 344578999999999999887766543 2335678899999999999999999999999999999999999999999
Q ss_pred CCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 133 NVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 133 gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
||+++++.+.++.+|++++++++++|++++.++ .+++..+++++++. +.+++++++++++. .+.+.+..++
T Consensus 101 Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~-----~~~~~~~~~~ 173 (331)
T 2fv7_A 101 DISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE-----ITPATSLEAL 173 (331)
T ss_dssp TEECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS-----SCHHHHHHHH
T ss_pred CCcceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC-----CCHHHHHHHH
Confidence 999999998888899999999998899998876 34555677777653 35778999988642 2346778889
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC---hHHHHHHHHhcCCCEEEEE
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVT 287 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvt 287 (381)
+.+++.++++++||+.+...|. .++++++|++++|++|++.|++....+ ..++++.|.+.|++.|+||
T Consensus 174 ~~a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT 244 (331)
T 2fv7_A 174 TMARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIIT 244 (331)
T ss_dssp HHHHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999986533222 256789999999999999999875433 2456678888999999999
Q ss_pred ecCCceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHHHHcC--CccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 288 EGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--FSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 288 ~G~~G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g--~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+|++|+++++++ +.+++|+++++++||+||||+|+|+|+++|++| ++ +++|+++|+++|+.++++.|+.
T Consensus 245 ~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~a~~~A~~~aa~~v~~~G~~ 317 (331)
T 2fv7_A 245 LGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQ 317 (331)
T ss_dssp CGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGG
T ss_pred ECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHHHHHHHHHHHHHHhCCCCCc
Confidence 999999999887 788999999999999999999999999999999 99 9999999999999999999998
Q ss_pred CCCCCHHHHHH
Q 016868 364 PALPTREAVLN 374 (381)
Q Consensus 364 ~~~~~~~~v~~ 374 (381)
+.+|+++++++
T Consensus 318 ~~~p~~~ev~~ 328 (331)
T 2fv7_A 318 SSYPYKKDLPL 328 (331)
T ss_dssp GGCCCGGGSCG
T ss_pred cCCCCHHHHhh
Confidence 78899988754
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=357.33 Aligned_cols=297 Identities=20% Similarity=0.162 Sum_probs=246.9
Q ss_pred CCcEEEEccceeecccCCCCCCccC---CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~---~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
|++|+|+|++++|++...++.+... ...+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~ 82 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVED 82 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCC
Confidence 3589999999999998776544332 1236788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++ ...++.+|++++++++++|++++.++. ...+..++++.+.. +.+..++++++++. .+.+.+..+++.
T Consensus 83 ~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~ 155 (317)
T 2nwh_A 83 TP-FTFLDRRTPSYTAILERDGNLVIALAD-MDLYKLFTPRRLKVRAVREAIIASDFLLCDAN-----LPEDTLTALGLI 155 (317)
T ss_dssp CC-EEETTSCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHTSHHHHHHHHHCSEEEEETT-----SCHHHHHHHHHH
T ss_pred CC-cccCCCCCceEEEEEcCCCCEEEEEcc-hHHHhhCCHHHhhhhhhhhHhccCCEEEEeCC-----CCHHHHHHHHHH
Confidence 98 556677999999999989999876653 33444577665542 45778999988642 245778889999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCc
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 292 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 292 (381)
+++.++++++||+. . ...+.+.++++++|++++|++|++.|++....+..++++.+.+.|++.|+||+|++|
T Consensus 156 a~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 227 (317)
T 2nwh_A 156 ARACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGASE 227 (317)
T ss_dssp HHHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHHHHHHHTTCCCEEEEETTTE
T ss_pred HHhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 99999999999962 1 123445678899999999999999999873333345778888899999999999999
Q ss_pred eEEEeCC-ceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHH
Q 016868 293 CRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 371 (381)
Q Consensus 293 ~~~~~~~-~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~ 371 (381)
+++++++ ..+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+..++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 228 VVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp EEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHSSTTCCGGGCCHHH
T ss_pred EEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9998866 46889999999999999999999999999999999 999999999999999999999987899999
Q ss_pred HHHHHhC
Q 016868 372 VLNAIHA 378 (381)
Q Consensus 372 v~~~l~~ 378 (381)
+++++..
T Consensus 301 v~~~~~~ 307 (317)
T 2nwh_A 301 VEAMLGL 307 (317)
T ss_dssp HHHHHTT
T ss_pred HHhHhhh
Confidence 9986543
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=350.63 Aligned_cols=291 Identities=22% Similarity=0.308 Sum_probs=249.3
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCc-eEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~-v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
|-++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.+ +.++|.+|+|.+|+++++.|++.|
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~g 92 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLG 92 (311)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred ccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCC
Confidence 5578999999999999988877654 23457788999999999999999999 999999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
| ++.+.++.+|+.++++++++|++++..++ +++..+++++++.+.+++++++++++.. +.+.+. +.+
T Consensus 93 V---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~---~~a 159 (311)
T 1vm7_A 93 I---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQNEI-----PFETTL---ECA 159 (311)
T ss_dssp E---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHHHHH---HHH
T ss_pred C---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEeCCC-----CHHHHH---HHH
Confidence 9 67776778999999999988999988873 5666688877766678899999987532 233333 337
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---CCChHHHHHHHHhcCCCEEEEEecC
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYKLFHANLKLLLVTEGP 290 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~~g~~~vvvt~G~ 290 (381)
++.++++++||+.... .+.++++++|++++|++|++.|++.. ..+..++++.|.+.|++.|+||+|+
T Consensus 160 ~~~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~ 229 (311)
T 1vm7_A 160 KRFNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGD 229 (311)
T ss_dssp HHCCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGG
T ss_pred HHcCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECC
Confidence 8889999999985322 22367899999999999999998752 2334677888989999999999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+++|+++
T Consensus 230 ~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 302 (311)
T 1vm7_A 230 KGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPARE 302 (311)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHH
T ss_pred CCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCccccCCCHH
Confidence 99999988888899999999999999999999999999999999 99999999999999999999987889999
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
|++++++++
T Consensus 303 ev~~~l~~~ 311 (311)
T 1vm7_A 303 EVEAFLKNL 311 (311)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999998764
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=362.90 Aligned_cols=297 Identities=18% Similarity=0.230 Sum_probs=253.4
Q ss_pred CCCcEEEEccceeecccCCCC--------------------CCcc----CCCCccccCCChHHHHHHHHHHc---CCceE
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL---GGSSA 111 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~NvA~~la~L---G~~v~ 111 (381)
++.+|+|+|++++|++..++. .|.. ....+...+||++.|+|++|++| |.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 346899999999999998874 2222 23567889999999999999999 99999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCc
Q 016868 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKA 187 (381)
Q Consensus 112 li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~ 187 (381)
++|.||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|+++.+ .+++..+++++++. +.++++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~l~~~~~~~~~~~~~~~~~ 179 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKA 179 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHC
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhhCCHHHcCchhhHHHHhhC
Confidence 99999999999999999999999999988767779999999998 899998876 45666788887764 568899
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC-
Q 016868 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED- 266 (381)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~- 266 (381)
+++|++++.+. .+.+.+.++++.+++.|+++++|+.. +.| .+..++.+.++++++|++++|++|++.|++...
T Consensus 180 ~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~--~~~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~ 253 (370)
T 3vas_A 180 QVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSA--PFL--SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGL 253 (370)
T ss_dssp SEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCC--HHH--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTC
T ss_pred CEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--HHH--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCC
Confidence 99999987543 45678889999999999999999852 111 123356778899999999999999999987632
Q ss_pred --CChHHHHHHHHhc-------CCCEEEEEecCCceEEEe--CCceEEEccccc---cccCCCCccHHHHHHHHHHHHcC
Q 016868 267 --PYDDAVVYKLFHA-------NLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 267 --~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g 332 (381)
.+.+++++.|.+. +++.||||+|++|+++++ +++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g 333 (370)
T 3vas_A 254 LEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRG 333 (370)
T ss_dssp CSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTT
T ss_pred CccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCC
Confidence 3346677888874 899999999999999999 778889999987 89999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++ +++|+++|+++|++++++.|+. +|++++++
T Consensus 334 ~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 334 KP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp CC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 99 9999999999999999999985 57777764
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=346.91 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=256.1
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
..|+|+++|+.+.++..... .+......+...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.||++++
T Consensus 11 ~~~~~~~~ge~l~~~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~ 89 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPDH-KRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDY 89 (351)
T ss_dssp CCCEEEEESCCEEEEECSTT-CCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTT
T ss_pred ccceEEEechhhheecCCCC-ccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCccee
Confidence 56899999999999775322 23333456788999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEE-ecCCCccccCChhccch-hhcCCccEEEEccccc-cCchhHHHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMF-YRNPSADMLLQEAELDL-SLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~ 215 (381)
+.. .+.+|+++++..+.+++++++. .+...+...++++++.. ..+++++++|++++.. ..+...+.+.++++.+++
T Consensus 90 v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 168 (351)
T 2afb_A 90 IAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANE 168 (351)
T ss_dssp EEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHH
T ss_pred EEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHH
Confidence 987 4679999988776544444433 33334445566766654 3468999999988754 345556888899999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC---------C---hHHHHHHHHhc-CCC
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP---------Y---DDAVVYKLFHA-NLK 282 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~---------~---~~~~~~~l~~~-g~~ 282 (381)
.++++++||+.+..+|. .+..++.+.++++++|++++|++|++.|++.... + ..++++.|.+. |++
T Consensus 169 ~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 247 (351)
T 2afb_A 169 KGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFK 247 (351)
T ss_dssp HTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCS
T ss_pred cCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCC
Confidence 99999999998888885 3456677888999999999999999999987653 2 23556777764 999
Q ss_pred EEEEEecCCce--------EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 016868 283 LLLVTEGPDGC--------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 283 ~vvvt~G~~G~--------~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
.|+||+|++|+ +++.+++.+++|+++++++|||||||+|+|+|+++|++|++ +++|+++|+++|+
T Consensus 248 ~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------l~~a~~~A~~~aa 320 (351)
T 2afb_A 248 TVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD-------SQKKAEFAAAASC 320 (351)
T ss_dssp EEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred EEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999975 77777778899999999999999999999999999999999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 355 LTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 355 ~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+++++.|+.. +|++++|++++++
T Consensus 321 ~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 321 LKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999874 7999999999864
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=346.15 Aligned_cols=287 Identities=25% Similarity=0.346 Sum_probs=235.4
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
|+++|+|+|++++|+++. ...+||++.|+|++|++||.++.++|.+|+|.+|+++++.|++.|| ++
T Consensus 2 m~~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~ 67 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KN 67 (296)
T ss_dssp -CCEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CE
T ss_pred CcceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CE
Confidence 346899999999999842 2579999999999999999999999999999999999999999999 77
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH-CC
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD-AG 217 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~-~g 217 (381)
+.+.++.+|+++++.++++|++++.++.. .....+.+.+...+.+++++++|++++....+.+.+.+.++++.+++ .+
T Consensus 68 v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~ 146 (296)
T 2qhp_A 68 QIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDG 146 (296)
T ss_dssp EEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTS
T ss_pred EeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCC
Confidence 87777789999999888889988877533 22333433222345678999999998765566677888888988887 69
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---CCChHHHHHHHHhc-CCCEEEEEecCCce
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYKLFHA-NLKLLLVTEGPDGC 293 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~~-g~~~vvvt~G~~G~ 293 (381)
.++++||+.+..+|. .+.+.++++++|++++|++|++.|++.. ..+.+++++.+.+. |++.|+||+|++|+
T Consensus 147 ~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~ 221 (296)
T 2qhp_A 147 QLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGS 221 (296)
T ss_dssp CEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCE
T ss_pred CEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCe
Confidence 999999998877663 2456678899999999999999998742 23446677888774 99999999999999
Q ss_pred EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 294 RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 294 ~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.+.+| +++.
T Consensus 222 ~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~~--~~l~ 292 (296)
T 2qhp_A 222 YVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSAYVCTQSGAMPELP--VILK 292 (296)
T ss_dssp EEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHTSSSSSCCCC--HHHH
T ss_pred EEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCc--HHHH
Confidence 99998888899999999999999999999999999999999 99999999999999999999986544 4444
Q ss_pred H
Q 016868 374 N 374 (381)
Q Consensus 374 ~ 374 (381)
+
T Consensus 293 ~ 293 (296)
T 2qhp_A 293 D 293 (296)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=349.84 Aligned_cols=289 Identities=24% Similarity=0.355 Sum_probs=242.4
Q ss_pred CcEEEEccceeecccCC----------CCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCC-ChHHHHH
Q 016868 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA-DEFGYML 125 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~-D~~g~~i 125 (381)
|+|+|+|++++|++..+ +..|.. ....+...+||++.|+|++|++||.++.++|.+|+ | +|+ +
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i 78 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-Y 78 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-H
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-H
Confidence 37999999999999877 444433 12456788999999999999999999999999999 9 899 9
Q ss_pred HHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHH
Q 016868 126 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSA 205 (381)
Q Consensus 126 ~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~ 205 (381)
++.|++.||+++++.+.++.+|+.+++.++++|++.+.++ +++...+.++++... ++++++|+++. .++.
T Consensus 79 ~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~~ 148 (326)
T 3b1n_A 79 LDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQG 148 (326)
T ss_dssp HHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHHH
T ss_pred HHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHHH
Confidence 9999999999999988888899999999998898887665 344444555555422 78999998753 2467
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEE
Q 016868 206 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLL 285 (381)
Q Consensus 206 ~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vv 285 (381)
+.++++.+++.++++++||+.+..+|. .+.+.++++++|++++|++|++.|++....+.+ .+.+. ++.||
T Consensus 149 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~----~l~~~-~~~vv 218 (326)
T 3b1n_A 149 MVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTGWSED----EIASR-VQALI 218 (326)
T ss_dssp HHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHH----HHHTT-SSEEE
T ss_pred HHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHH----HHHhc-CCEEE
Confidence 778899999999999999987665553 244567889999999999999999875433333 23343 89999
Q ss_pred EEecCCceEEEeCCceEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 286 VTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 286 vt~G~~G~~~~~~~~~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+..
T Consensus 219 vT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~~ 291 (326)
T 3b1n_A 219 ITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATAGRLASLMGALKIAHQGPQT 291 (326)
T ss_dssp EECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSTTC
T ss_pred EecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999998888899999986 789999999999999999999999 99999999999999999999988
Q ss_pred CCCCHHHHHHHHhC
Q 016868 365 ALPTREAVLNAIHA 378 (381)
Q Consensus 365 ~~~~~~~v~~~l~~ 378 (381)
.+|+++++++++++
T Consensus 292 ~~~~~~ev~~~l~~ 305 (326)
T 3b1n_A 292 YAPTRAEIDARFET 305 (326)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 88999999998764
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=350.61 Aligned_cols=291 Identities=23% Similarity=0.264 Sum_probs=245.1
Q ss_pred CcEEEEccceeecccCC----------CCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHH
Q 016868 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLA 126 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~----------~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~ 126 (381)
|+|+|+|++++|++..+ +..|.. ....+...+||++.|+|++|++||.++.++|.+|+| +|+ ++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i~ 88 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-YR 88 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-HH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-HH
Confidence 68999999999999876 444432 124567889999999999999999999999999999 999 99
Q ss_pred HHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchh--hcCCccEEEEccccccCchhHH
Q 016868 127 DILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS--LITKAKIFHYGSISLITEPCKS 204 (381)
Q Consensus 127 ~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~i~~~~~~~~~~~~~~~~~~~~ 204 (381)
+.|++.||+++++.+.++.+|+.++++++++|++.+.+++ ++...++++++... .+++++++|+++.. ++
T Consensus 89 ~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~ 160 (334)
T 2pkf_A 89 DWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP--GAMSEARNIKLADVVSAIGKPELVIIGAND------PE 160 (334)
T ss_dssp HHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC--GGGGGGGGCCHHHHHHHHCSCSEEEEESCC------HH
T ss_pred HHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC--chhhhCCHhhcChhhhhhcCCCEEEEcCCC------hH
Confidence 9999999999999988888999999999888998886663 34545555555432 35889999987642 45
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEE
Q 016868 205 AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLL 284 (381)
Q Consensus 205 ~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~v 284 (381)
.+.++++.+++.++++++||+.+..+|. .+.+.++++++|++++|++|++.|++....+.+ .+.+. ++.|
T Consensus 161 ~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~~~-~~~v 230 (334)
T 2pkf_A 161 AMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEA----DVMAQ-IDLR 230 (334)
T ss_dssp HHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHH----HHHTT-CSCE
T ss_pred HHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhccCCCCHH----HHHhc-CCEE
Confidence 7778889999999999999987766663 245667899999999999999999876443322 34444 8899
Q ss_pred EEEecCCceEEEeCCc-eEEEcccccc-ccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCC
Q 016868 285 LVTEGPDGCRYYTKDF-SGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~-~~~~~~~~v~-vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~ 362 (381)
+||+|++|++++++++ .+++|+++++ ++||+||||+|+|||+++|++|++ +++|+++|+++|+.++++.|+
T Consensus 231 vvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~ 303 (334)
T 2pkf_A 231 VTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------LERSAQLGSLVAVLVLESTGT 303 (334)
T ss_dssp EEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS
T ss_pred EEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999998877 8899999987 789999999999999999999999 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhC
Q 016868 363 IPALPTREAVLNAIHA 378 (381)
Q Consensus 363 ~~~~~~~~~v~~~l~~ 378 (381)
...+|+++++++++++
T Consensus 304 ~~~~p~~~ev~~~l~~ 319 (334)
T 2pkf_A 304 QEWQWDYEAAASRLAG 319 (334)
T ss_dssp SCCCCCHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHH
Confidence 9889999999998754
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=339.99 Aligned_cols=290 Identities=21% Similarity=0.195 Sum_probs=243.1
Q ss_pred CCcEEEEccceeec-ccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 60 SPLVVCFGEMLIDF-VPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 60 ~~~vlviG~~~iD~-~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
.|-+.|.+++++|+ +..++..... ....+...+||++.|+|.+|++||.++.++|.+|+| +|+++++.|++.||+
T Consensus 2 ~mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 80 (320)
T 3ie7_A 2 SLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHIN 80 (320)
T ss_dssp CCEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCC
T ss_pred ceEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCc
Confidence 36677889999999 9888876332 244578899999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCC--ceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
++++...++ +|+.++++++ +|+ ++++.. .+. .+++++++. +.++++++++++++.. ...+.+.+.
T Consensus 81 ~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~ 153 (320)
T 3ie7_A 81 HDFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPP-PHYTLSDFK 153 (320)
T ss_dssp BCCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCC-TTCCHHHHH
T ss_pred eEEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCC-CCCCHHHHH
Confidence 999955555 8999999888 788 777654 232 366655542 5678999999977633 344567888
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLV 286 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvv 286 (381)
++++.+++.|+++++||+ . +.+.+.+. .+|++++|++|++.|+|.......+.+.++.+. ++.|+|
T Consensus 154 ~~~~~a~~~g~~v~~D~~--------~----~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~-~~~vvv 220 (320)
T 3ie7_A 154 ELLRTVKATGAFLGCDNS--------G----EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEK-IPYLVV 220 (320)
T ss_dssp HHHHHHHHHTCEEEEECC--------H----HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTT-CSEEEE
T ss_pred HHHHHHHhcCCEEEEECC--------h----HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhh-CCEEEE
Confidence 999999999999999995 1 13344454 899999999999999998765233344455555 899999
Q ss_pred EecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 287 TEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 287 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
|+|++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+ ..
T Consensus 221 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G~--~~ 291 (320)
T 3ie7_A 221 SLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLKVATGCSASKVMQQDS--SS 291 (320)
T ss_dssp ECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSS--SC
T ss_pred EcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhCcCC--CC
Confidence 999999999999999999999999999999999999999999999999 999999999999999999994 67
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|++++++++++++
T Consensus 292 ~~~~ev~~~~~~~ 304 (320)
T 3ie7_A 292 FDLEAAGKLKNQV 304 (320)
T ss_dssp CCHHHHHHHGGGC
T ss_pred CCHHHHHHHhhCe
Confidence 9999999999875
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=349.29 Aligned_cols=292 Identities=18% Similarity=0.241 Sum_probs=244.0
Q ss_pred CCCcEEEEccceeecccCCCC--------------------CCcc----CCCCccccCCChHHHHHHHHHHc----CCc-
Q 016868 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL----GGS- 109 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~NvA~~la~L----G~~- 109 (381)
+.++|+++|++++|++..++. .|.. +...+...+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 346899999999999988874 2221 23467889999999999999999 999
Q ss_pred eEEEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcC
Q 016868 110 SAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLIT 185 (381)
Q Consensus 110 v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~ 185 (381)
+.++|.||+|.+|+++++.|++.||+++++. .++.+|++++++++ +|+|+++.+ .++...++++++.. +.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999985 56779999999998 899988765 45666688877763 5688
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC-
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG- 264 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~- 264 (381)
+++++|++++.+. .+.+.+.++++.++++|+++++|+... .| .+..++.+.++++++|++++|++|++.|++.
T Consensus 162 ~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~ 235 (347)
T 3otx_A 162 ESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANMM 235 (347)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHH
T ss_pred hCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhccc
Confidence 9999999987543 356788899999999999999998521 11 1233567888999999999999999999864
Q ss_pred --CCCChHHHHHHHH------hcCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCC
Q 016868 265 --EDPYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 265 --~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
...+.+++++.|. +.+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~ 315 (347)
T 3otx_A 236 KWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGK 315 (347)
T ss_dssp TCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTC
T ss_pred CCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCC
Confidence 2244567778887 47899999999999999999988889999887 899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 334 SLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
+ +++|+++|+++|++++++.|+. +|++
T Consensus 316 ~-------l~~a~~~a~~~aa~~v~~~G~~--~p~~ 342 (347)
T 3otx_A 316 D-------LRRCCETGHYTAQEVIQRDGCS--FPEK 342 (347)
T ss_dssp C-------HHHHHHHHHHHHHHHHTCC------CCS
T ss_pred C-------HHHHHHHHHHHHHHHHcccCCC--CCCC
Confidence 9 9999999999999999999964 4543
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=340.38 Aligned_cols=289 Identities=17% Similarity=0.176 Sum_probs=237.9
Q ss_pred CcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|.++|+|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+++
T Consensus 21 Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~~ 99 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKHA 99 (330)
T ss_dssp CEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEEC
T ss_pred EEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCcee
Confidence 57779999999999887764222 23457788999999999999999999999999996 699999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAAAK 211 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (381)
++...++ |++++++++++ ++++... .++ .+++++++. +.+++++++|+++.... +.+.+.+.++++
T Consensus 100 ~v~~~~~--t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~ 171 (330)
T 2jg1_A 100 FYNIKGE--TRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQIIE 171 (330)
T ss_dssp CEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHHHH
T ss_pred EEEccCC--CeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHHHH
Confidence 9887654 67777777765 6654433 333 255555432 23688999998775432 344567888999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh---hCCEEecCHHHHhhccCCCCC----ChHHHHHHHHhcCCCEE
Q 016868 212 AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEEISFLTQGEDP----YDDAVVYKLFHANLKLL 284 (381)
Q Consensus 212 ~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~---~~dvl~~N~~E~~~l~~~~~~----~~~~~~~~l~~~g~~~v 284 (381)
.+++.|+++++||+ . +.+.++++ ++|++++|++|++.|++.... +..++++.|.+.|++.|
T Consensus 172 ~a~~~g~~v~~D~~--------~----~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~V 239 (330)
T 2jg1_A 172 RCQNKGVPVILDCS--------G----ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWI 239 (330)
T ss_dssp HHHTTTCCEEEECC--------H----HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSEE
T ss_pred HHHHCCCEEEEECC--------c----HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999996 1 13456666 899999999999999987543 23455677788899999
Q ss_pred EEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 285 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 240 vvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~G~~- 311 (330)
T 2jg1_A 240 IVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHDLLKKANTLGMLNAQEAQTG- 311 (330)
T ss_dssp EEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSS-
T ss_pred EEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCcCCC-
Confidence 99999999999998888899999999999999999999999999999999 9999999999999999999984
Q ss_pred CCCCHHHHHHHHhCC
Q 016868 365 ALPTREAVLNAIHAP 379 (381)
Q Consensus 365 ~~~~~~~v~~~l~~~ 379 (381)
.|++++++++++++
T Consensus 312 -~~~~~ev~~~~~~i 325 (330)
T 2jg1_A 312 -YVNLNNYDDLFNQI 325 (330)
T ss_dssp -CCCGGGHHHHHTTC
T ss_pred -CCCHHHHHHHHhce
Confidence 68999999998875
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=349.10 Aligned_cols=288 Identities=19% Similarity=0.223 Sum_probs=239.8
Q ss_pred CCcEEEEccceeecccCCCCC-------Ccc-----------------CCCCccccCCChHHHHHHHHHHc---CCceEE
Q 016868 60 SPLVVCFGEMLIDFVPTVSGL-------SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~NvA~~la~L---G~~v~l 112 (381)
+.+|+++|++++|++..++.. ... +.......+||++.|+|+++++| |.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 357999999999999888762 111 11245688999999999999987 999999
Q ss_pred EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCcc
Q 016868 113 IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAK 188 (381)
Q Consensus 113 i~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~ 188 (381)
+|.||+|.+|+++++.|++.||+++++.. ++.+|++++++++ +++|+++.+ .+++..+++++++. +.+++++
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTPEHLRSDGNRAYLQGAQ 178 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCGGGGGSHHHHHHHHHCS
T ss_pred EEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCHhHcCchhhHHHHhhCC
Confidence 99999999999999999999999999887 6779999999998 788888765 56666788887763 5678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC---
Q 016868 189 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE--- 265 (381)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~--- 265 (381)
++|++++.+. .+.+.+.++++.+++.|+++++|+.. +.| .+..++.+.++++++|++++|++|++.|++..
T Consensus 179 ~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~ 252 (365)
T 3loo_A 179 FFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSA--PFV--PQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYG 252 (365)
T ss_dssp EEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCS--THH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--hhh--hHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCC
Confidence 9999987542 45678889999999999999999852 111 13346678889999999999999999998753
Q ss_pred CCChHHHHHHHHhc------CCCEEEEEecCCceEEE--eCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCc
Q 016868 266 DPYDDAVVYKLFHA------NLKLLLVTEGPDGCRYY--TKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 266 ~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
..+.+++++.|.+. +++.||||+|++|++++ .+++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 253 ~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~ 332 (365)
T 3loo_A 253 TEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRT 332 (365)
T ss_dssp CCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCC
Confidence 34456777888774 89999999999999999 7778889999988 8999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 335 LLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+++|+++|+++|+.++++.|+..
T Consensus 333 -------l~~a~~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 333 -------VDVCIKCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp -------HHHHHHHHHHHHHHHHHHGGGGG
T ss_pred -------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999863
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=333.90 Aligned_cols=290 Identities=22% Similarity=0.241 Sum_probs=239.8
Q ss_pred cEEEE-ccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlvi-G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+++ +++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|+++||+++
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceE
Confidence 45555 68999999988876332 355678999999999999999999999999999999 99999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch-----hhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++...++.+++.++ +.+++|+++++.+. ++. +++++++. +.+..+++++++++. ..+.+.+.+.++++.
T Consensus 82 ~v~~~~~t~~~~~~-~~~~~g~~~~~~~~--g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 155 (309)
T 3umo_A 82 TVEAKDWTRQNLHV-HVEASGEQYRFVMP--GAA--LNEDEFRQLEEQVLEIESGAILVISGSL-PPGVKLEKLTQLISA 155 (309)
T ss_dssp EEECSSCCCCCEEE-EETTTCCEEEEECC--CCC--CCHHHHHHHHHHHTTSCTTCEEEEESCC-CTTCCHHHHHHHHHH
T ss_pred EEEecCCCeeEEEE-EECCCCcEEEEEcC--CCC--CCHHHHHHHHHHHHhcCCCCEEEEEccC-CCCCCHHHHHHHHHH
Confidence 88876554444443 33447888877653 332 56655531 123577899998763 234556788899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh--CCEEecCHHHHhhccCCCCC---ChHHHHHHHHhcCC-CEEEE
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEISFLTQGEDP---YDDAVVYKLFHANL-KLLLV 286 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~--~dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~~g~-~~vvv 286 (381)
+++.++++++||. .+.+.++++. +|++++|++|++.|++.... +..++++.|.+.+. +.|+|
T Consensus 156 a~~~~~~v~~D~~------------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvv 223 (309)
T 3umo_A 156 AQKQGIRCIVDSS------------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVV 223 (309)
T ss_dssp HHHTTCEEEEECC------------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEE
T ss_pred HHhcCCEEEEECC------------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 9999999999995 1245567777 59999999999999987643 23456788888887 89999
Q ss_pred EecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 016868 287 TEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPAL 366 (381)
Q Consensus 287 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~ 366 (381)
|+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|+. .
T Consensus 224 t~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~--~ 294 (309)
T 3umo_A 224 SLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR--L 294 (309)
T ss_dssp ECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSTTC--C
T ss_pred EcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCC--C
Confidence 999999999999889999999999999999999999999999999999 9999999999999999999985 6
Q ss_pred CCHHHHHHHHhCC
Q 016868 367 PTREAVLNAIHAP 379 (381)
Q Consensus 367 ~~~~~v~~~l~~~ 379 (381)
|+++||+++++++
T Consensus 295 ~~~~ev~~~l~~~ 307 (309)
T 3umo_A 295 CSHDDTQKIYAYL 307 (309)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 9999999999875
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-44 Score=333.53 Aligned_cols=289 Identities=21% Similarity=0.202 Sum_probs=237.2
Q ss_pred CCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
+|.|+|+|++++|++..++. +.. ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~ 79 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIP 79 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCC
T ss_pred ceEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCc
Confidence 47899999999999998876 332 13457788999999999999999999999999997 5999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCKSAHIAA 209 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
++++...++ |++++++++++ ++++... .++ .+++++++. +.++++++++++++... ..+.+.+.++
T Consensus 80 ~~~v~~~~~--t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~ 151 (323)
T 2f02_A 80 QAFTSIKEE--TRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAK-GLPSDFYQEL 151 (323)
T ss_dssp BCCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCB-TSCTTHHHHH
T ss_pred eeEEEcCCC--CeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCC-CCChHHHHHH
Confidence 999887654 66666667765 6655433 333 256655432 24688999998765432 2344677888
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh---hhCCEEecCHHHHhhccCCCCC-----ChHHHHHHHHhcCC
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW---ETADIIKISEEEISFLTQGEDP-----YDDAVVYKLFHANL 281 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l---~~~dvl~~N~~E~~~l~~~~~~-----~~~~~~~~l~~~g~ 281 (381)
++.+++.++++++||+. + .+.+++ +++|++++|++|++.|++.... +..++++.|.+.|+
T Consensus 152 ~~~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~ 219 (323)
T 2f02_A 152 VQKAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGI 219 (323)
T ss_dssp HHHHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTC
T ss_pred HHHHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 99999999999999962 1 233455 4899999999999999987632 22345677778899
Q ss_pred CEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 282 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 282 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
+.|+||+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|
T Consensus 220 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G 292 (323)
T 2f02_A 220 EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERM 292 (323)
T ss_dssp SEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSS
T ss_pred CEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999988888899999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhCC
Q 016868 362 AIPALPTREAVLNAIHAP 379 (381)
Q Consensus 362 ~~~~~~~~~~v~~~l~~~ 379 (381)
+. +|++++++++++++
T Consensus 293 ~~--~~~~~ev~~~~~~~ 308 (323)
T 2f02_A 293 TG--HVDVENVKKHLMNI 308 (323)
T ss_dssp SS--CCCHHHHHHHHTTC
T ss_pred cC--CCCHHHHHHHhhcE
Confidence 84 68999999998765
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=336.93 Aligned_cols=291 Identities=14% Similarity=0.133 Sum_probs=239.2
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CC---CCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHH
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKE 131 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~---~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~ 131 (381)
..|.|+|+|++++|++..++. +.. .. ..+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|++
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~ 88 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRK 88 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHH
T ss_pred cceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH
Confidence 458999999999999988877 332 12 5678889999999999999999999999999998 99999999999
Q ss_pred CC--CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch------hhcCCccEEEEccccccCchhH
Q 016868 132 NN--VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLITEPCK 203 (381)
Q Consensus 132 ~g--i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~~~ 203 (381)
.| |+++++...++ |++++++++++|++.+.+. ..++ .+++++++. +.+.+++++|+++.... ..+.
T Consensus 89 ~g~~V~~~~v~~~~~--t~~~~~~v~~~g~~~~~~~-~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~ 162 (331)
T 2ajr_A 89 ISKLITTNFVYVEGE--TRENIEIIDEKNKTITAIN-FPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPP-GVNE 162 (331)
T ss_dssp HCTTEEEEEEEESSC--CEEEEEEEETTTTEEEEEE-CCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCT-TSCT
T ss_pred cCCccceEEEEcCCC--CeEEEEEEeCCCceEEEEe-CCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCC-CCCH
Confidence 99 99998877653 6677777777888833343 2333 256655432 34688999999765322 2345
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhh---CCEEecCHHH-HhhccCCCCCCh---HHHHHHH
Q 016868 204 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET---ADIIKISEEE-ISFLTQGEDPYD---DAVVYKL 276 (381)
Q Consensus 204 ~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~---~dvl~~N~~E-~~~l~~~~~~~~---~~~~~~l 276 (381)
+.+.++++.+++.|+++++||+. + .+.+++++ +|++++|++| ++.|++....+. .++++.|
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l 230 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTP--------R----LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL 230 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCH--------H----HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCh--------H----HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHH
Confidence 67788899999999999999961 2 24455554 9999999999 999998764433 3466778
Q ss_pred HhcCCCEEEEEecCCceEEEeCCceEEEc-cccccccCCCCccHHHHHHHHHHHH-cCCccccchHHHHHHHHHHHHHHH
Q 016868 277 FHANLKLLLVTEGPDGCRYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRDALRFANACGA 354 (381)
Q Consensus 277 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~-~~~v~vvdttGAGDaF~ag~l~~l~-~g~~~~~~~~~l~~al~~A~~~Aa 354 (381)
.+. ++.|+||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|+
T Consensus 231 ~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~-------~~~al~~A~a~aa 302 (331)
T 2ajr_A 231 AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASAL 302 (331)
T ss_dssp HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHH
T ss_pred HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 778 9999999999999999888888899 9999999999999999999999999 9999 9999999999999
Q ss_pred HHhhhcCCCCCCCCHHHHHHHHhCC
Q 016868 355 LTVMERGAIPALPTREAVLNAIHAP 379 (381)
Q Consensus 355 ~~~~~~G~~~~~~~~~~v~~~l~~~ 379 (381)
+++++.|+. +|++++++++++++
T Consensus 303 ~~v~~~G~~--~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 303 AATRRKEKY--MPDLEAIKKEYDHF 325 (331)
T ss_dssp HHTTSSSCC--CCCHHHHHTTGGGE
T ss_pred HHHcCcCcC--CCCHHHHHHHHhhc
Confidence 999999984 69999999988764
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=343.46 Aligned_cols=298 Identities=18% Similarity=0.231 Sum_probs=239.4
Q ss_pred cEEEEccceeecccCCCCC-------Ccc-----------------CCCCccccCCChHHHHHHHHHHcCCc---eEEEe
Q 016868 62 LVVCFGEMLIDFVPTVSGL-------SLA-----------------ESPAFKKAPGGAPANVAVGIARLGGS---SAFIG 114 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~-------~~~-----------------~~~~~~~~~GG~~~NvA~~la~LG~~---v~li~ 114 (381)
.|++||+.++|++..++.. +.. +....+..+||++.|+|+++++||.+ +.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 6999999999999877632 110 12345668999999999999999965 99999
Q ss_pred ecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch----hhcCCccEE
Q 016868 115 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIF 190 (381)
Q Consensus 115 ~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~----~~i~~~~~~ 190 (381)
+||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|++..+ .++...+++++++. +.+++++++
T Consensus 108 ~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~~~i~~~~~~~~i~~a~~~ 184 (372)
T 3uq6_A 108 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQVY 184 (372)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred eecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcchhhhhhhhHHHHhhcccEE
Confidence 99999999999999999999999998888889999988875 899998887 45666688877763 467889999
Q ss_pred EEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC---C
Q 016868 191 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED---P 267 (381)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~---~ 267 (381)
+++++.+ +...+...++++.+++.++++++|++.+.. .+..++.+.++++++|++++|++|++.|++... .
T Consensus 185 ~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~ 258 (372)
T 3uq6_A 185 YIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLED 258 (372)
T ss_dssp EEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSS
T ss_pred EEecccc--cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchh
Confidence 9998753 345678889999999999999999863211 233467788899999999999999999987543 2
Q ss_pred ChHHHHHHHHh-------cCCCEEEEEecCCceEEEeCCc--eEEE--cccc-ccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 268 YDDAVVYKLFH-------ANLKLLLVTEGPDGCRYYTKDF--SGRV--QGLK-VEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 268 ~~~~~~~~l~~-------~g~~~vvvt~G~~G~~~~~~~~--~~~~--~~~~-v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
+.+++++.+.+ .+.+.||||+|++|+++++.++ ...+ ++.+ .++||||||||+|+|||+++|++|++
T Consensus 259 ~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~- 337 (372)
T 3uq6_A 259 TVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP- 337 (372)
T ss_dssp HHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-
T ss_pred HHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC-
Confidence 33455566554 4677899999999999998663 2333 3333 47999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 336 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++|+++|+++|+.+|++.|+. +|++++++-.++
T Consensus 338 ------l~~a~~~a~~aAa~vv~~~Ga~--lp~r~~~~lkln 371 (372)
T 3uq6_A 338 ------MITSLHAAVKAAAYIICRSGFS--LGSRDSYSLKIN 371 (372)
T ss_dssp ------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGCC----
T ss_pred ------HHHHHHHHHHHHHHHHcCCCCC--CCChhHHHHHhc
Confidence 9999999999999999999974 688887765444
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=341.60 Aligned_cols=287 Identities=21% Similarity=0.275 Sum_probs=230.1
Q ss_pred CCCCcEEEEccceeecccC--CCCC----Ccc--CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHH
Q 016868 58 RESPLVVCFGEMLIDFVPT--VSGL----SLA--ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADIL 129 (381)
Q Consensus 58 ~~~~~vlviG~~~iD~~~~--~~~~----~~~--~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l 129 (381)
..+++|+|+|++++|++.. ++.. |.+ ....+...+||+ .|+|++|++||.++.++|.+|+|.+|+++++.|
T Consensus 51 ~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L 129 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELL 129 (352)
T ss_dssp HTTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHH
T ss_pred cCCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHH
Confidence 3457999999999999865 2222 221 234577899998 899999999999999999999999999999999
Q ss_pred HHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHH
Q 016868 130 KENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHI 207 (381)
Q Consensus 130 ~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (381)
++.||++ .+...++.+|++++++++.++++..+.+ ....+.....+.++ .+.++++++++++++... +.+.+.
T Consensus 130 ~~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~---~~~~~~ 204 (352)
T 4e84_A 130 GSSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDF-EAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKG---GLTHVT 204 (352)
T ss_dssp TTTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEE-CCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSS---SCSSHH
T ss_pred HHcCCce-eeEECCCCCCceEEEEEcCCceEEEEEc-CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCC---CHHHHH
Confidence 9999999 4666677899999999887666543332 12222112221111 356889999999976421 122367
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh---HHHHHHHHh-cCCCE
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLFH-ANLKL 283 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~-~g~~~ 283 (381)
++++.+++.|+++++||+.. .| ++++.+|++++|++|++.|++ ...+. .++++.|++ .|++.
T Consensus 205 ~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~~g~~~ 270 (352)
T 4e84_A 205 TMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAELDIDA 270 (352)
T ss_dssp HHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCE
Confidence 88899999999999999753 22 357899999999999999999 33222 345567764 79999
Q ss_pred EEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 284 LLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 284 vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 271 VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al~~A~aaaa~~v~~~Ga~ 343 (352)
T 4e84_A 271 LLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAVVLANRAAGIVVGKLGTA 343 (352)
T ss_dssp EEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSC
T ss_pred EEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999997
Q ss_pred CCCCCHHHHH
Q 016868 364 PALPTREAVL 373 (381)
Q Consensus 364 ~~~~~~~~v~ 373 (381)
+ ++++||+
T Consensus 344 ~--~t~~el~ 351 (352)
T 4e84_A 344 T--VDYDELF 351 (352)
T ss_dssp C--CCHHHHT
T ss_pred c--CCHHHhc
Confidence 5 6999885
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=337.50 Aligned_cols=287 Identities=20% Similarity=0.290 Sum_probs=239.3
Q ss_pred CCcEEEEccceeecccCCCC-------CCcc-----------------CCCCccccCCChHHHHHHHHHHcC----CceE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVGIARLG----GSSA 111 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~NvA~~la~LG----~~v~ 111 (381)
.++|+|+|++++|++..++. .... +...+...+||++.|+|++|++|| .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 36899999999999988765 1111 124667889999999999999996 9999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChh-ccc----hhhcCC
Q 016868 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA-ELD----LSLITK 186 (381)
Q Consensus 112 li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~l~----~~~i~~ 186 (381)
++|.+|+|.+|+++++.|+++||+++++. .++.+|++++++++ +|+|+++.+ .+++..++++ +++ .+.+++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~ 161 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVEK 161 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHHH
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHhh
Confidence 99999999999999999999999999886 45668999999887 788877654 4555567776 665 345778
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCC-
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE- 265 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~- 265 (381)
++++|++++.+. .+.+.+.++++.+++.++++++|+.. +.| .+..++.+.++++++|++++|++|++.|++..
T Consensus 162 ~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~ 235 (345)
T 1bx4_A 162 ARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSA--PFI--SQFYKESLMKVMPYVDILFGNETEAATFAREQG 235 (345)
T ss_dssp CSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCS--HHH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCc--HHH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcccC
Confidence 999999887542 35578889999999999999999852 112 12334567789999999999999999998643
Q ss_pred --CCChHHHHHHHHh------cCCCEEEEEecCCceEEEeCCceEEEccccc---cccCCCCccHHHHHHHHHHHHcCCc
Q 016868 266 --DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 266 --~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
..+.+++++.|.+ .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~ 315 (345)
T 1bx4_A 236 FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP 315 (345)
T ss_dssp CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCC
Confidence 3345677788887 5999999999999999998888889999887 8999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 335 LLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+++|+++|+++|+.++++.|+.
T Consensus 316 -------~~~a~~~A~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 316 -------LTECIRAGHYAASIIIRRTGCT 337 (345)
T ss_dssp -------HHHHHHHHHHHHHHHTTSSSSC
T ss_pred -------HHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999986
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=336.40 Aligned_cols=277 Identities=13% Similarity=0.207 Sum_probs=230.2
Q ss_pred CCCcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
++++|+|+|++++|++..++..|.. ....+...+||++.|+|++|++||.++.++|.+|+| +|+++++.|++.||+
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~ 97 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGIN 97 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCC
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCC
Confidence 3468999999999999887766622 233467889999999999999999999999999999 999999999999999
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++++...++.+|+++++++++ |++++..+. +++..++ +++. ++++++|+++.. ...++++.+++
T Consensus 98 ~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~--ga~~~~~-~~l~----~~~~~v~~~~~~--------~~~~~~~~a~~ 161 (306)
T 3bf5_A 98 TGHVEKFEDESGPICYIATDG-KKQVSFMHQ--GAMAAWA-PQLA----DEYEYVHFSTGP--------NYLDMAKSIRS 161 (306)
T ss_dssp CTTEEEETTCCCSEEEEEECS-SCEEEEEEC--THHHHCC-CCCC----SCEEEEEECSSS--------SHHHHHHHCCS
T ss_pred chheEecCCCCCceEEEEEcC-CeeEEEEeC--Chhhhhh-Hhhc----CCCCEEEECChH--------HHHHHHHHhCC
Confidence 999987777789999999988 999887763 3444455 4442 678999998753 34566776664
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
++++||+.+. |.. ..+.+.++++++|++++|++|++.|++....+.. .+ .||||+|++|+++
T Consensus 162 ---~v~~D~~~~~--~~~---~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l------~vvvT~G~~Ga~~ 223 (306)
T 3bf5_A 162 ---KIIFDPSQEI--HKY---SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP----KV------TTIVTNGERGSSL 223 (306)
T ss_dssp ---EEEECCGGGG--GGS---CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC----SS------CEEEEEGGGEEEE
T ss_pred ---cEEEcCchhh--hhc---cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc----cE------EEEEeecccCeEE
Confidence 9999998432 211 1455677889999999999999999875433221 11 1999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh--cCCCCCCCCHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME--RGAIPALPTREAVL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~--~G~~~~~~~~~~v~ 373 (381)
+++++.+++|+++++ +||+||||+|+|||+++|++|++ +++|+++|+++|++++++ .|+.+.+|++++++
T Consensus 224 ~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~ 295 (306)
T 3bf5_A 224 FMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHVIDDGIENFSLNMEDLERET 295 (306)
T ss_dssp EETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHH
T ss_pred EeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhccCCccccccCCCHHHHH
Confidence 998888899999999 99999999999999999999999 999999999999999999 99987789999999
Q ss_pred HHHhC
Q 016868 374 NAIHA 378 (381)
Q Consensus 374 ~~l~~ 378 (381)
+++++
T Consensus 296 ~~~~~ 300 (306)
T 3bf5_A 296 ENYRR 300 (306)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=328.72 Aligned_cols=288 Identities=22% Similarity=0.239 Sum_probs=230.2
Q ss_pred cEEEE-ccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 62 ~vlvi-G~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
+|+++ |++++|++..++..... ....+...+||++.|+|.+|++||.++.++|.+|+| +|+++++.|+++||+++
T Consensus 3 ~I~~v~g~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred eEEEEeccchheEEEEcCCCcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCce
Confidence 57744 69999999887763222 234577889999999999999999999999999998 99999999999999999
Q ss_pred CeeecCCCCceEEEEE-ecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVT-LRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAAA 210 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (381)
++...++ |++++++ ++++|+++++.. ++. .+++++++ .+.+++ +++|++++.. ...+.+.+.+++
T Consensus 82 ~v~~~~~--t~~~~~~~~~~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~-~~~~~~~~~~~~ 153 (309)
T 3cqd_A 82 TVEAKDW--TRQNLHVHVEASGEQYRFVM--PGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLP-PGVKLEKLTQLI 153 (309)
T ss_dssp EEECSSC--CCCCEEEEETTTCCEEEEEC--CCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCC-TTCCHHHHHHHH
T ss_pred eEEcCCC--CeeEEEEEEcCCCCEEEEEc--CCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCC-CCCCHHHHHHHH
Confidence 9877654 4444455 678888765543 333 25555443 134677 9999987643 234567888899
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHH-hhhC-CEEecCHHHHhhccCCCCC---ChHHHHHHHHhcC-CCEE
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-WETA-DIIKISEEEISFLTQGEDP---YDDAVVYKLFHAN-LKLL 284 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~-l~~~-dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~~g-~~~v 284 (381)
+.+++.++++++||+. .. +.+. .+.+ |++++|++|++.|++.... +..++++.+.+.| ++.|
T Consensus 154 ~~a~~~g~~v~~D~~~--------~~----~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~v 221 (309)
T 3cqd_A 154 SAAQKQGIRCIVDSSG--------EA----LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRV 221 (309)
T ss_dssp HHHHTTTCEEEEECCH--------HH----HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCE
T ss_pred HHHHHcCCeEEEECCh--------HH----HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999962 11 2333 3778 9999999999999987543 2345678888899 9999
Q ss_pred EEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 285 LVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 285 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
+||+|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|+.++++.|+.
T Consensus 222 vvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~~~~~G~~- 293 (309)
T 3cqd_A 222 VVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAAGSAATLNQGTR- 293 (309)
T ss_dssp EEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTC------
T ss_pred EEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCcCCC-
Confidence 99999999999988888899999999999999999999999999999999 9999999999999999999985
Q ss_pred CCCCHHHHHHHHhCC
Q 016868 365 ALPTREAVLNAIHAP 379 (381)
Q Consensus 365 ~~~~~~~v~~~l~~~ 379 (381)
.|++++++++++++
T Consensus 294 -~~~~~~v~~~~~~~ 307 (309)
T 3cqd_A 294 -LCSHDDTQKIYAYL 307 (309)
T ss_dssp -CCCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHh
Confidence 58999999998865
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=331.32 Aligned_cols=292 Identities=17% Similarity=0.227 Sum_probs=232.1
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|+|+|+|+|++++|++.... ......+||++.|+|++|++||. ++.++|.+|+| +|+++++.|+++||+++
T Consensus 1 M~~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~ 72 (313)
T 3kd6_A 1 MSLSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTR 72 (313)
T ss_dssp --CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEE
T ss_pred CCccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCcc
Confidence 34689999999999996532 23567899999999999999999 99999999999 99999999999999999
Q ss_pred CeeecCCCCceEEEE--EecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFV--TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD 215 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 215 (381)
++.+.++.+|....- ..+.++++++... .+....+.++ + .+.+++++++|++++. .+...++++.+ +
T Consensus 73 ~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~------~~~~~~~~~~~-~ 141 (313)
T 3kd6_A 73 GIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID------PELQLKVLDQI-D 141 (313)
T ss_dssp EEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC------HHHHHHHHTTC-S
T ss_pred ceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC------HHHHHHHHHHH-h
Confidence 998887767743211 1233445554432 2333334332 2 3567899999997642 24455666666 5
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
.+.++++||. .+|. +...+.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.|+||+|++|+++
T Consensus 142 ~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 214 (313)
T 3kd6_A 142 DPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP--NLVKTARIIREMGPKTLIIKKGEHGALL 214 (313)
T ss_dssp SCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS--CHHHHHHHHHTTSCSEEEEECTTSCEEE
T ss_pred hCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CHHHHHHHHHHcCCCEEEEeeCCCcEEE
Confidence 7889999983 2232 2345677789999999999999999999865 3467888999999999999999999999
Q ss_pred EeCCceEEEccccc-cccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCC-CCCHHHHH
Q 016868 296 YTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPA-LPTREAVL 373 (381)
Q Consensus 296 ~~~~~~~~~~~~~v-~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~-~~~~~~v~ 373 (381)
+++++.+++|++++ +++||+||||+|+|||+++|++|.+ .+..++++|+++|+++|++++++.|+.+. .|+++||+
T Consensus 215 ~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~--~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~ 292 (313)
T 3kd6_A 215 FTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGN--TSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVD 292 (313)
T ss_dssp EETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHH
T ss_pred EECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCC--ccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHH
Confidence 99998899999998 7999999999999999999999871 01223999999999999999999999753 58999999
Q ss_pred HHHhC
Q 016868 374 NAIHA 378 (381)
Q Consensus 374 ~~l~~ 378 (381)
+++++
T Consensus 293 ~~l~~ 297 (313)
T 3kd6_A 293 DRYQS 297 (313)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=324.77 Aligned_cols=277 Identities=18% Similarity=0.276 Sum_probs=226.9
Q ss_pred CCCcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNV 134 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi 134 (381)
.+++|+|+|++++|++..++..|... .......+||++.|+|++|++||.++.++|.+|+|.+|+++++.|+++||
T Consensus 16 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV 95 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSV 95 (312)
T ss_dssp -CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred CCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCC
Confidence 34689999999999998777655432 23456789999999999999999999999999999999999999999999
Q ss_pred CCCCeeecCCCCceEEEEEec-CCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 135 NGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 135 ~~~~v~~~~~~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
+++++...++.+|++++++++ .+|+|++++++ ++...+++++++...+++++++|++++. .+...++++.+
T Consensus 96 ~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~--~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~~~~~~~~~a 167 (312)
T 2hlz_A 96 DLRYTVFQTTGSVPIATVIINEASGSRTILYYD--RSLPDVSATDFEKVDLTQFKWIHIEGRN------ASEQVKMLQRI 167 (312)
T ss_dssp BCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC--CCCCCCCHHHHHTSCGGGEEEEEEECSS------HHHHHHHHHHH
T ss_pred CCccceeccCCCCCeEEEEEECCCCceEEEecC--CccccCCHHHhhHhhhccCCEEEEeccC------HHHHHHHHHHH
Confidence 999998876667787777665 57999988764 3445677777765567889999998762 24556667777
Q ss_pred HHC--------CCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCC--CE
Q 016868 214 KDA--------GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL--KL 283 (381)
Q Consensus 214 ~~~--------g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~--~~ 283 (381)
++. ++++++|+... ++.+.++++++|++++|++|++.+ +. .+.+++++.+.+.+. +.
T Consensus 168 ~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~--~~~~~~~~~l~~~~~~g~~ 234 (312)
T 2hlz_A 168 DAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GF--QSAEEALRGLYGRVRKGAV 234 (312)
T ss_dssp HHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TC--CSHHHHHHHHGGGSCTTCE
T ss_pred HHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CC--CCHHHHHHHHHHhcCCCCE
Confidence 765 68899998532 124557889999999999999987 54 344667777776543 89
Q ss_pred EEEEecCCceEEEeC-CceEEEccc-cccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 284 LLVTEGPDGCRYYTK-DFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 284 vvvt~G~~G~~~~~~-~~~~~~~~~-~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
||||+|++|+++++. ++.+++|++ +++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.|
T Consensus 235 vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G 307 (312)
T 2hlz_A 235 LVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQEALRFGCQVAGKKCGLQG 307 (312)
T ss_dssp EEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS
T ss_pred EEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhhcC
Confidence 999999999999875 456788985 468999999999999999999999999 99999999999999999999
Q ss_pred CC
Q 016868 362 AI 363 (381)
Q Consensus 362 ~~ 363 (381)
+.
T Consensus 308 ~~ 309 (312)
T 2hlz_A 308 FD 309 (312)
T ss_dssp SG
T ss_pred cc
Confidence 64
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=338.25 Aligned_cols=287 Identities=22% Similarity=0.286 Sum_probs=234.2
Q ss_pred CCcEEEEccceeecccCCCC-C-----Ccc-----------------CCCCccccCCChHHHHHHHHHHc---CCceEEE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-L-----SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~NvA~~la~L---G~~v~li 113 (381)
+++|+|+|++++|++..++. . +.. +...+...+||++.|+|++|++| |.++.++
T Consensus 32 ~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~i 111 (383)
T 2abs_A 32 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 111 (383)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEEE
Confidence 46899999999999987654 1 111 12356778999999999999999 8999999
Q ss_pred eecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEc
Q 016868 114 GKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYG 193 (381)
Q Consensus 114 ~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ 193 (381)
|.||+|.+|+++++.|++.||+++++. .++.+|++++++++ +|+++++.+ .+++..+++++...+.+++++++|++
T Consensus 112 g~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v~~~ 187 (383)
T 2abs_A 112 GAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIFYAT 187 (383)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEEEEE
T ss_pred EEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEEEEe
Confidence 999999999999999999999999886 45679999999987 788877654 45555566554334668899999999
Q ss_pred cccccCchhHHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCC------
Q 016868 194 SISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED------ 266 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~------ 266 (381)
++.+. .+.+.+.++++.+++ .++++++|+.. ++| .+..++.+.++++++|++++|++|++.|++...
T Consensus 188 g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~ 261 (383)
T 2abs_A 188 AYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEK 261 (383)
T ss_dssp GGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----
T ss_pred eeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccc
Confidence 87542 345788899999998 89999999852 122 123346677899999999999999999976431
Q ss_pred ---------CChHHHHHHHHh------c-CCCEEEEEecCCceEEE-----eCCceEEEccccc---cccCCCCccHHHH
Q 016868 267 ---------PYDDAVVYKLFH------A-NLKLLLVTEGPDGCRYY-----TKDFSGRVQGLKV---EAVDATGAGDAFV 322 (381)
Q Consensus 267 ---------~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~v---~vvdttGAGDaF~ 322 (381)
.+.+++++.|.+ . |++.||||+|++|++++ .+++.+++|++++ +++||+||||+|+
T Consensus 262 ~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ 341 (383)
T 2abs_A 262 TALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFV 341 (383)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHH
T ss_pred cccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHH
Confidence 112355667766 3 89999999999999998 5556778898877 8999999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 323 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 323 ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
|||+++|++|++ +++|+++|+++|++++++.|+.
T Consensus 342 ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 342 GGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999 9999999999999999999986
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=321.79 Aligned_cols=285 Identities=21% Similarity=0.252 Sum_probs=235.0
Q ss_pred cEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
=+.|.|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||++++
T Consensus 2 i~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~ 80 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSF 80 (306)
T ss_dssp EEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEE
Confidence 4678899999999888775322 23457788999999999999999999999999998 7999999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hh---cCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL---ITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~---i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
+...++ |++++++ .+|++++... .+. .+++++++. +. +++++++|++++... ..+.+.+.++++.+
T Consensus 81 v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a 151 (306)
T 2abq_A 81 IEVEGD--TRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQ-AMPQTIYRSMTQIA 151 (306)
T ss_dssp EEESSC--CEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHHH
T ss_pred EEcCCC--CceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCC-CCCHHHHHHHHHHH
Confidence 987643 6666655 4788765433 333 356655432 11 578999998775432 33456778889999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG 289 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G 289 (381)
++.|+++++||+ . +.+.++++ ++|++++|++|++.|++....+. .++++.+.+.|++.|+||+|
T Consensus 152 ~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 219 (306)
T 2abq_A 152 KERGAFVAVDTS--------G----EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFA 219 (306)
T ss_dssp HTTTCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred HhcCCEEEEECC--------h----HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 999999999995 1 23567888 99999999999999998754433 34567888899999999999
Q ss_pred CCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCH
Q 016868 290 PDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 369 (381)
Q Consensus 290 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~ 369 (381)
++|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++. ++|++
T Consensus 220 ~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~----~~p~~ 288 (306)
T 2abq_A 220 GDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSD----GFCTR 288 (306)
T ss_dssp GGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSS----SCCCH
T ss_pred CCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCc----CCCCH
Confidence 999999988888899999999999999999999999999999999 9999999999999999998 46899
Q ss_pred HHHHHHHhCC
Q 016868 370 EAVLNAIHAP 379 (381)
Q Consensus 370 ~~v~~~l~~~ 379 (381)
++++++++++
T Consensus 289 ~ev~~~~~~~ 298 (306)
T 2abq_A 289 EEVERLQQQL 298 (306)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhE
Confidence 9999988753
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=319.04 Aligned_cols=286 Identities=21% Similarity=0.253 Sum_probs=233.7
Q ss_pred CcEEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGA 137 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~ 137 (381)
|-+.|.|++++|++..++..... ....+...+||++.|+|++|++||.++.++|.+|+ .+|+++++.|++.||+++
T Consensus 1 mi~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~ 79 (306)
T 2jg5_A 1 MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSN 79 (306)
T ss_dssp CEEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCcee
Confidence 35778899999999888764222 23457788999999999999999999999999999 699999999999999999
Q ss_pred CeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--h-h--cCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 138 GMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--S-L--ITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 138 ~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~-~--i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
++...++ |++++.+ .+|+++++.. .+. .+++++++. + . +++++++|+++.... ..+.+.+.++++.
T Consensus 80 ~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~ 150 (306)
T 2jg5_A 80 FIEVDED--TRINVKL--KTGQETEINA--PGP--HITSTQFEQLLQQIKNTTSEDIVIVAGSVPS-SIPSDAYAQIAQI 150 (306)
T ss_dssp CEECSSC--CEEEEEE--ESSSEEEEEC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHH
T ss_pred EEEcCCC--CeEEEEE--cCCCEEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEeCCCCC-CCChHHHHHHHHH
Confidence 9887543 6666555 4677755443 333 255555432 1 1 578999998765432 2334677788899
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEe
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTE 288 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~ 288 (381)
+++.++++++||+ . ..+.++++ .+|++++|++|++.|++....+. .++++.+.+.|++.|+||+
T Consensus 151 a~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 218 (306)
T 2jg5_A 151 TAQTGAKLVVDAE--------K----ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSL 218 (306)
T ss_dssp HHHHCCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHCCCEEEEECC--------h----HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEcc
Confidence 9999999999995 1 13455677 69999999999999998765433 3466778889999999999
Q ss_pred cCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 016868 289 GPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 368 (381)
Q Consensus 289 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~ 368 (381)
|++|++++++++.+++|+++++++||+||||+|+|+|+++|++|++ +++|+++|+++|++++++.| +|+
T Consensus 219 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~a~aa~~v~~~G----~~~ 287 (306)
T 2jg5_A 219 GGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAVACGTATAFDED----LAT 287 (306)
T ss_dssp GGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS----SCC
T ss_pred CCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC----CCC
Confidence 9999999988888899999999999999999999999999999999 99999999999999999999 589
Q ss_pred HHHHHHHHhCC
Q 016868 369 REAVLNAIHAP 379 (381)
Q Consensus 369 ~~~v~~~l~~~ 379 (381)
+++++++++++
T Consensus 288 ~~ev~~~~~~~ 298 (306)
T 2jg5_A 288 RDAIEKIKSQV 298 (306)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhce
Confidence 99999998775
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=300.69 Aligned_cols=278 Identities=18% Similarity=0.122 Sum_probs=216.4
Q ss_pred CcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCee
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMR 140 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~ 140 (381)
-.|.++|.+..|.+.+.. .+...+||++.|+|++|++||.++.++|.+|+|. +.+++.|++.||+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~ 81 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLK 81 (298)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEE
T ss_pred eeEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEe
Confidence 358999999999887643 3567899999999999999999999999999996 788999999999999775
Q ss_pred ecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeE
Q 016868 141 FDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVL 220 (381)
Q Consensus 141 ~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v 220 (381)
. +.+|++..++ +.+|++++..+. ++...++++++.. .+++++|++++.. .+.. .++++.+++.++++
T Consensus 82 ~--~~~t~~~~i~-~~~g~~~~~~~~--~~~~~l~~~~~~~---~~~~~v~~~~~~~-~~~~----~~~~~~~~~~g~~v 148 (298)
T 1vk4_A 82 S--PRTTSIENRY-GSDPDTRESFLI--SAADPFTESDLAF---IEGEAVHINPLWY-GEFP----EDLIPVLRRKVMFL 148 (298)
T ss_dssp C--SSCEEEEEEC------CCEEEEE--ECCCCCCGGGGGG---CCSSEEEECCSST-TSSC----GGGHHHHHHHCSEE
T ss_pred c--CCCcEEEEEE-cCCCCeeEEEec--cccccCCHHHcCc---CCCCEEEECCccc-cccc----HHHHHHHHHcCCEE
Confidence 4 3456665554 556887776553 3445567666543 6789999988643 2222 35567777889999
Q ss_pred EEeCCC-CCCCCCCH--HHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEe
Q 016868 221 SYDPNL-RLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297 (381)
Q Consensus 221 ~~D~~~-~~~~~~~~--~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 297 (381)
++||+. ...+|... ...++.+.++++++|++++|++|++.|++.. +.+++++.|.+.|++.||||+ ++|+++++
T Consensus 149 ~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~ 225 (298)
T 1vk4_A 149 SADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN--DLRESCRIIRSFGAKIILATH-ASGVIVFD 225 (298)
T ss_dssp EEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCS--CHHHHHHHHHHTTCSSEEEEE-TTEEEEES
T ss_pred EEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCCC--CHHHHHHHHHhcCCCEEEEEc-CCCcEEEe
Confidence 999962 11001000 0001235678899999999999999999875 346778888899999999999 99999988
Q ss_pred CCceEEEccccccccCCCCccHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 298 ~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~-g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
+ +.+++|+++++++|||||||+|+|||+++|++ |++ +++|+++|+++|++++++.|+.+. |+++|+.
T Consensus 226 ~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v~~~G~~~~-~~~~el~ 293 (298)
T 1vk4_A 226 G-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGPLRR-EDLEAIS 293 (298)
T ss_dssp S-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSSCCG-GGGGGCC
T ss_pred C-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHccCCCCCC-CCHHHHh
Confidence 7 77889999999999999999999999999999 999 999999999999999999999865 6776653
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-26 Score=210.78 Aligned_cols=218 Identities=17% Similarity=0.098 Sum_probs=160.3
Q ss_pred ceEEEeecCCChHHHHHHHHHHHCCCCCCCeeec--CCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hh-
Q 016868 109 SSAFIGKVGADEFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL- 183 (381)
Q Consensus 109 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~--~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~- 183 (381)
++.++|.+|+|. |+++ |+++||+++++... .+ +|++.+ . .+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHH
Confidence 567889999998 9988 99999999887653 21 222111 1 11 1245554431 11
Q ss_pred ----cCCccEEEEccccccCchhHHHHHHHHHHHHHCCCe--EEEeCCCCCC------CCCCHHHHHHHHHH-HhhhCCE
Q 016868 184 ----ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV--LSYDPNLRLP------LWPSADKAREGILS-IWETADI 250 (381)
Q Consensus 184 ----i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~--v~~D~~~~~~------~~~~~~~~~~~~~~-~l~~~dv 250 (381)
+.++++++++... .+...+.+.++++.++++|.+ +++||+.+.. +|.. +...+.+.+ +++++|+
T Consensus 70 ~~~~~~~~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~di 146 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADI 146 (312)
T ss_dssp HHTTCCCCSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSE
T ss_pred HhcCCccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCE
Confidence 6778998876432 333456667888888887754 8899986543 4432 245556665 8999999
Q ss_pred EecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC------ceEEE-------eC-C----ceEEEccccc
Q 016868 251 IKISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD------GCRYY-------TK-D----FSGRVQGLKV 309 (381)
Q Consensus 251 l~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~v 309 (381)
++||++|++.|+|....+. .++++.|++.|++.||||.|+. |++++ ++ + +.++++++++
T Consensus 147 l~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 147 ITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp ECCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred EcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 9999999999998764332 4566788889999999998876 47765 44 2 5678888888
Q ss_pred cccCCCCccHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 310 EAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 310 ~vvdttGAGDaF~ag~l~~l~~-g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++ ||+||||+|+|+|+++|++ |++ +++|+++|+++++.++++
T Consensus 227 ~v-dttGAGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 DA-VFVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SS-CCSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCchHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 87 9999999999999999998 999 999999999999888753
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=206.18 Aligned_cols=226 Identities=18% Similarity=0.131 Sum_probs=164.7
Q ss_pred cCCceEE-EeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch---
Q 016868 106 LGGSSAF-IGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--- 181 (381)
Q Consensus 106 LG~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--- 181 (381)
||..... +|.+|+| .....|++.||++.++.. . +..+.+|.+.+.. ..++++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~g-------~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFYG-------GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCCE-------EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCceee-------eeCCHHHHHHHHH
Confidence 4444344 6777776 245688889999887643 1 2224456554211 1234433321
Q ss_pred ---h--hcCCccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHHHHHhhhCCEE
Q 016868 182 ---S--LITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGILSIWETADII 251 (381)
Q Consensus 182 ---~--~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dvl 251 (381)
+ .++++++++++.+. .....+.+.++++.+++ .++++++||+.+. .+|.+.+.......++++++|++
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 1 45678999987643 23456777888888887 7999999998764 45644333333345688999999
Q ss_pred ecCHHHHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC-------ceEEEeCCceEEEccccccccCCCCccHHH
Q 016868 252 KISEEEISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAF 321 (381)
Q Consensus 252 ~~N~~E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~v~vvdttGAGDaF 321 (381)
++|+.|++.|+|....+. .++++++.+.|++.|+||.|++ |++++++++.++++++++. +||+||||+|
T Consensus 157 ~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf 235 (283)
T 2ddm_A 157 TPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLF 235 (283)
T ss_dssp CCBHHHHHHHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHH
T ss_pred cCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHH
Confidence 999999999999764432 3456778788999999999999 8999888888889988886 8999999999
Q ss_pred HHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcC
Q 016868 322 VAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361 (381)
Q Consensus 322 ~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G 361 (381)
+|+|++++++|++ +++|+++|+++++.++++..
T Consensus 236 ~a~~~~~l~~g~~-------~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 236 CAQLISGLLKGKA-------LTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999998654
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-23 Score=187.62 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=124.9
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHHHCCCe-EEEeCCCCC----CCCCCHHHHHHHHHH-HhhhCCEEecCHHHHhh
Q 016868 187 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEEISF 260 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E~~~ 260 (381)
+++++++.+. +.+.+..+++.+++.+.+ +++||+.+. .+|. +...+.+.+ +++.+|+++||+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6787776431 456778888999999986 999998764 2443 233344544 78999999999999999
Q ss_pred ccCC-CCCCh---HHHHHHHHhcCCCEEEEEecCCc-----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 261 LTQG-EDPYD---DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 261 l~~~-~~~~~---~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
|++. ...+. .+++++|.+.|++.||||.|++| ++++++++.+++++++++++||+||||+|+|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 54332 35567888899999999999999 888888778889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999766
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=183.32 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=126.8
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCC-CeEEEeCCCCCC----CCCCHHHHHHHH-HHHhhhCCEEecCHHHHh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLP----LWPSADKAREGI-LSIWETADIIKISEEEIS 259 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g-~~v~~D~~~~~~----~~~~~~~~~~~~-~~~l~~~dvl~~N~~E~~ 259 (381)
+.+.++++.+ . +.+....+++.+++.+ +++++||+.+.. +|. +...+.+ .++++++|+++||+.|++
T Consensus 70 ~~~~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGAL--G---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCC--C---SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCc--C---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 3677777642 1 3456677788888888 899999986543 443 1223344 457899999999999999
Q ss_pred hccCCCCCCh---HHHHHHHHhcCCCEEEEEecCC-c----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 260 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-G----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 260 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
.|++....+. .++++++.+.|++.|+||.|++ | ++++++++.+++++++++++||+||||+|+|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9998765432 3556778888999999999998 8 788888788889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999888754
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=174.40 Aligned_cols=163 Identities=16% Similarity=0.126 Sum_probs=132.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCC-eEEEeCCCCCCCCCC--HHHHHHHHH-HHhhhCCEEecCHHHHhhc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLPLWPS--ADKAREGIL-SIWETADIIKISEEEISFL 261 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~-~v~~D~~~~~~~~~~--~~~~~~~~~-~~l~~~dvl~~N~~E~~~l 261 (381)
+.|.++++.+ .. .+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|+++||+.|++.|
T Consensus 74 ~~d~v~~G~l--~~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGML--PT---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCC--CS---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--CC---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 5788887653 12 4667788888888898 599999877654432 122344554 6889999999999999999
Q ss_pred cCCC-CCCh---HHHHHHHHhcCCCEEEEEecC--Cce----EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHc
Q 016868 262 TQGE-DPYD---DAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 331 (381)
Q Consensus 262 ~~~~-~~~~---~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~ 331 (381)
++.. ..+. .++++++.+.|++.|+||.|. +|+ +++++++.+++++++++++||+||||+|+|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9876 4332 355678888999999999999 785 77777778889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 332 DFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 332 g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
|++ +++|+++|+++++.++++.
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999864
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=168.98 Aligned_cols=165 Identities=17% Similarity=0.108 Sum_probs=132.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCC--CCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP--LWP-SADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~--~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
..|.+.++- +.+....+.+.++++.+++.++++++||+.+.. +|. ..+...+.++++++.+|+++||..|++.|+
T Consensus 77 ~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 567777763 335555677888888877678999999987654 454 235566777889999999999999999999
Q ss_pred CCCCC------ChHHHHHHHHhcCCCEEEEEecC-------CceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHH
Q 016868 263 QGEDP------YDDAVVYKLFHANLKLLLVTEGP-------DGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 263 ~~~~~------~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
|.... +..+++++|.+.|++.|+||.|. .|+++++++ +.++++.+++. +|++|+||+|+|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 98643 23456788889999999999653 577888763 45678887775 8999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhhhc
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTVMER 360 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~ 360 (381)
+|++|.+ +++|+++|++++..++.+-
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999988887653
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-20 Score=166.42 Aligned_cols=162 Identities=17% Similarity=0.152 Sum_probs=127.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC--CCCC-CHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL--PLWP-SADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~--~~~~-~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.|.+.++.+ .+....+.+.++++.. .+.++++||+.+. .+|. ..+...+.+.++++.+|+++||..|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 5678877643 2333344444444433 4689999998874 4454 235566777889999999999999999999
Q ss_pred CCCCC---ChHHHHHHHHh-cCC-CEEEEEecC----CceEEEe-CCceEEEccccccccCCCCccHHHHHHHHHHHHcC
Q 016868 263 QGEDP---YDDAVVYKLFH-ANL-KLLLVTEGP----DGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 332 (381)
Q Consensus 263 ~~~~~---~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g 332 (381)
|.... +..+++++|.+ .|+ +.|+||.|. .|+++++ +++.++++++++. +|++|+||+|+|+|+++|++|
T Consensus 150 g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g 228 (282)
T 3h74_A 150 GAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRG 228 (282)
T ss_dssp TCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCC
Confidence 87642 44677888888 999 999999994 7888885 6667788888775 899999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 333 FSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 333 ~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
++ +++|+++|+++++.++++
T Consensus 229 ~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 229 YP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999998888764
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=165.36 Aligned_cols=164 Identities=19% Similarity=0.099 Sum_probs=130.8
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCC--CeEEEeCCCCC----CCCCCHHHHHHHHHH-HhhhCCEEecCHHH
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEE 257 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g--~~v~~D~~~~~----~~~~~~~~~~~~~~~-~l~~~dvl~~N~~E 257 (381)
.++|++..+. +.+....+.+.++++.+++.+ +++++||.... .+|. +...+.+.+ +++.+|+++||..|
T Consensus 76 ~~~d~v~~G~--l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLSGY--IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEECC--CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHHH
Confidence 5788876554 345566778888898888766 88999995432 2343 345555654 88999999999999
Q ss_pred HhhccCCCCCCh---HHHHHHHHhcCCCEEEEEec-CCce-------EEEeCCceEEEccccccc--cCCCCccHHHHHH
Q 016868 258 ISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG-PDGC-------RYYTKDFSGRVQGLKVEA--VDATGAGDAFVAG 324 (381)
Q Consensus 258 ~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~v~v--vdttGAGDaF~ag 324 (381)
++.|+|....+. .+++++|.+.|++.|+||.| .+|+ +++++++.++++++++++ +|++|+||+|+|+
T Consensus 152 ~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~ 231 (289)
T 3pzs_A 152 LEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGL 231 (289)
T ss_dssp HHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHH
Confidence 999999875543 34567888899999999985 5787 777777788888888876 9999999999999
Q ss_pred HHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 325 ILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 325 ~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
|++++++|++ +++|+++|+++++..+++
T Consensus 232 ~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 232 LLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999987776654
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=159.27 Aligned_cols=163 Identities=13% Similarity=0.049 Sum_probs=122.9
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCC------CeEEEeCCCCCC--CCCCHHHHHHHHHHHhhhCCEEecCHH
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG------VVLSYDPNLRLP--LWPSADKAREGILSIWETADIIKISEE 256 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g------~~v~~D~~~~~~--~~~~~~~~~~~~~~~l~~~dvl~~N~~ 256 (381)
.++|.+..+. +.+....+.+.++++..++.+ .++++||..... +|.. +...+.+.++++.+|+++||..
T Consensus 75 ~~~daV~tG~--l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~-~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGY--INNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCK-KEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecC-HHHHHHHHHHhhhCCEecCCHH
Confidence 4678877654 335555677778888877654 789999976543 6643 4556677779999999999999
Q ss_pred HHhhccCCCCCCh---HHHHHHHHhcCCCEEEEEecCCc-------eEEEeC------CceEEEccccccccCCCCccHH
Q 016868 257 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-------CRYYTK------DFSGRVQGLKVEAVDATGAGDA 320 (381)
Q Consensus 257 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~~~~~~v~vvdttGAGDa 320 (381)
|++.|+|....+. .++++.|++.|++.|+||.|..| +++..+ ++.++++.++++. |++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999999876543 35567888899999999999988 333334 4667788888876 89999999
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 321 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 321 F~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
|+|+|+++| +|++ +++|+++|+++....+.+
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 999999999997666653
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=7.6e-15 Score=133.15 Aligned_cols=163 Identities=15% Similarity=0.014 Sum_probs=113.7
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 259 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 259 (381)
+.++.++.+++..-. ..+...+.+.++++.+++.++++++||..... . ....+...++++ .+|+++||..|++
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~-~~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---T-PFRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---B-HHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---c-cchHHHHHHHHccCCCeEECCCHHHHH
Confidence 445667887763322 23445577778888888999999999963221 1 111234456676 8999999999999
Q ss_pred hccCCC-C--------CC---hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHH
Q 016868 260 FLTQGE-D--------PY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 260 ~l~~~~-~--------~~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
.|+|.. . .+ ..++++.|.+.+...|++| |..+ +++++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999865 3 11 1345567766544455555 9887 5666667778887777788999999999888888
Q ss_pred HHHcCCccccchHHHHHHHHHHHH----HHHHHhh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANA----CGALTVM 358 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~----~Aa~~~~ 358 (381)
.+.+|.+ +.+|+++|+. ++....+
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888998 9999999886 5554444
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.1e-15 Score=146.08 Aligned_cols=159 Identities=18% Similarity=0.078 Sum_probs=118.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHH-HHhhhCCEEecCHHHHhh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGIL-SIWETADIIKISEEEISF 260 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~-~~l~~~dvl~~N~~E~~~ 260 (381)
+.|.+.++.+ +....+.+.++++..++.+.++++||+.+. .++. +...+.+. ++++.+|+++||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788887743 555566777777777666889999997542 2232 23344444 789999999999999999
Q ss_pred ccCCC--CCC---hHHHHHHHHhcCC-CEEEEEecCCc--------e--EEE--eCCceEEEccccccccCCCCccHHHH
Q 016868 261 LTQGE--DPY---DDAVVYKLFHANL-KLLLVTEGPDG--------C--RYY--TKDFSGRVQGLKVEAVDATGAGDAFV 322 (381)
Q Consensus 261 l~~~~--~~~---~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~v~vvdttGAGDaF~ 322 (381)
|+|.. ..+ ..++++.|.+.|. +.||||.|..+ + +++ ++++.++++.++++.+|++|+||+|+
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99974 222 2456678888776 89999998763 3 455 34567778888888899999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 016868 323 AGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356 (381)
Q Consensus 323 ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~ 356 (381)
|+|++.+++|.+ +++|+++|+..-...
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~a 272 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNA 272 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 999999999999 999999999644333
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-11 Score=108.29 Aligned_cols=146 Identities=17% Similarity=0.039 Sum_probs=99.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh-hCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dvl~~N~~E~~~ 260 (381)
+.++.+|.+.++.-.. .+...+.+..+++.+++.++++++||..... . ....+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~-~~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGA---T-KFRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---B-HHHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccc---c-ccCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 4567788888753322 4433455667778888889999999964221 1 112233344444 39999999999999
Q ss_pred ccCCCC------------CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 261 LTQGED------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 261 l~~~~~------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|+|... .+..++++.+.+.+...|++| |..+ +++++++.++++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d-~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVD-YVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCc-EEEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 987541 112345677776665566766 8766 45566667777765555669999999999999999
Q ss_pred HHcCCc
Q 016868 329 LSTDFS 334 (381)
Q Consensus 329 l~~g~~ 334 (381)
+.+|.+
T Consensus 205 lA~g~~ 210 (265)
T 1v8a_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCC
Confidence 998864
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.3e-10 Score=102.71 Aligned_cols=170 Identities=14% Similarity=0.087 Sum_probs=104.2
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHH-h-hhCCEEecCHHHHhh
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-W-ETADIIKISEEEISF 260 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~-l-~~~dvl~~N~~E~~~ 260 (381)
.+++.|.+.++--...++...+.+.++++.++ .++++++|+. .......-..+ + +..++|+||..|++.
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44567888776312223333445555555443 5889999983 11111110011 3 467899999999999
Q ss_pred ccCCCCCCh-HH----HHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHH-Hc-CC
Q 016868 261 LTQGEDPYD-DA----VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-ST-DF 333 (381)
Q Consensus 261 l~~~~~~~~-~~----~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l-~~-g~ 333 (381)
|+|....+. ++ +++++.+ + .+|+..| .+.++++ ++.+++.....+..+++|+||+| +|+++++ .+ |.
T Consensus 193 L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g~ 266 (311)
T 3bgk_A 193 LSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFHT 266 (311)
T ss_dssp TTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCCS
T ss_pred HhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccCC
Confidence 999765432 22 3344444 3 3555556 6677777 54456666677888999999998 5555555 68 99
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhh---cCCCCCCCCHHHHHHHHh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVME---RGAIPALPTREAVLNAIH 377 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~---~G~~~~~~~~~~v~~~l~ 377 (381)
+ +.+|+.+|+++.+...+. .| ++ ....+|.+.+.
T Consensus 267 ~-------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 303 (311)
T 3bgk_A 267 D-------RFEVAAAAVFLHSYIADQLSKEA--YV-VLPTRISAEIT 303 (311)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHHHTTC--SS-CCHHHHHHHHH
T ss_pred C-------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 8 999999987776664331 24 23 46667766554
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=99.12 E-value=8.6e-10 Score=101.27 Aligned_cols=169 Identities=11% Similarity=-0.050 Sum_probs=102.7
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh--hhCCEEecCHHHHhh
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEISF 260 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l--~~~dvl~~N~~E~~~ 260 (381)
.+++++.+.++--...++...+.+.++++.++ .++++++|+. .......-..++ +..++|+||..|++.
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 34567888776312223333445555555443 5889999983 111111100112 467899999999999
Q ss_pred ccCCCCCCh-----HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 261 LTQGEDPYD-----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 261 l~~~~~~~~-----~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
|+|....+. .++++++ ++ +|+..| .+.++++ ++..++.....+..+++|+||+|+|.+.+.+.+|.+
T Consensus 179 L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~Lag~Iaa~lA~g~~- 250 (310)
T 2r3b_A 179 LSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKP- 250 (310)
T ss_dssp HHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHHHHHHHHHHHHSCS-
T ss_pred HhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC-
Confidence 999764332 2233444 43 556666 5667776 443455666677889999999975544444469998
Q ss_pred ccchHHHHHHHHHHHHHHHHHhh---hcCCCCCCCCHHHHHHHHh
Q 016868 336 LQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~---~~G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|+.+.+..-. ..| ++ ....+|.+.+.
T Consensus 251 ------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~ 286 (310)
T 2r3b_A 251 ------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALP 286 (310)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHH
Confidence 89999988776665433 224 23 45666665543
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.6e-09 Score=92.47 Aligned_cols=164 Identities=13% Similarity=-0.034 Sum_probs=109.5
Q ss_pred CChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEe
Q 016868 174 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIK 252 (381)
Q Consensus 174 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~ 252 (381)
..++++. +..+.++.+.++--. ..+...+.+..+++.+++.++++++||..... .. ...+....++ ..+++++
T Consensus 47 ~~~~e~~-e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~-~r~~~~~~Ll~~~~~VIt 120 (273)
T 3dzv_A 47 DDPREFP-QMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SD-IRNEVGEKLVHNQPTVVK 120 (273)
T ss_dssp CCGGGHH-HHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CH-HHHHHHHHHHHTCCSEEE
T ss_pred CCHHHHH-HHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---cc-cCHHHHHHHHhcCCcEEC
Confidence 3344442 567778888776433 34444566777788889999999999964322 11 1122233333 3689999
Q ss_pred cCHHHHhhccCCCCC-----------------ChHHHHHHHHhcCC-CEEEEEecCCceEEEeCCceEEEccccccccCC
Q 016868 253 ISEEEISFLTQGEDP-----------------YDDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 314 (381)
Q Consensus 253 ~N~~E~~~l~~~~~~-----------------~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdt 314 (381)
||..|+..|+|.... +..++++.+.+... ..|++|-+. -+++++++.+.++......-.+
T Consensus 121 pN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~~v 198 (273)
T 3dzv_A 121 GNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELDCF 198 (273)
T ss_dssp EEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGGSS
T ss_pred CCHHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccCCc
Confidence 999999999986531 11234566766554 666666542 3556666666666544445567
Q ss_pred CCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 016868 315 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 352 (381)
Q Consensus 315 tGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~ 352 (381)
+|.||++.|.+.+.+.+|.+ +.+|+..|...
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 99999999999999999998 88888877654
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=7.8e-08 Score=86.69 Aligned_cols=170 Identities=15% Similarity=0.041 Sum_probs=108.4
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.++++|++.++.- +..+ +...++++.+.+.+.++++|...-.. +.+ ......++++||..|++.|+
T Consensus 95 ~l~~~davviGPG-lg~~---~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l-~~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPG-LPQT---ESVQQAVDHVLTADCPVILDAGALAK---------RTY-PKREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTT-CCCC---HHHHHHHHHHTTSSSCEEECGGGCCS---------CCC-CCCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCC-CCCC---HHHHHHHHHHHhhCCCEEEECCccch---------hhh-hhccCCEEEecCHHHHHHHh
Confidence 3567899888642 2121 23345666666778899999842110 000 00135789999999999999
Q ss_pred CCCC----CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccc
Q 016868 263 QGED----PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 338 (381)
Q Consensus 263 ~~~~----~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~ 338 (381)
|... .+..++++++.+.+-. +|+-.|. +.++++.+..+++.....+...++|+||+++|.+.+.+.+|.+
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~---- 234 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 234 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CCCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC----
Confidence 9763 2234556667654322 4555553 4566666655566665567788999999876666666779998
Q ss_pred hHHHHHHHHHHHH----HHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 339 EDQLRDALRFANA----CGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 339 ~~~l~~al~~A~~----~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|.. ++-...++.|.. + ....+|.+.+.
T Consensus 235 ---~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp 272 (279)
T 3rpz_A 235 ---PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILP 272 (279)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 8999988864 444445556654 3 46677766554
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=6.3e-08 Score=94.47 Aligned_cols=172 Identities=11% Similarity=-0.005 Sum_probs=108.3
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHH-HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAK-AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
+.++.+|.+.++.-...++. ..++++ .+++.++++++|+..-.. . . .+.+ +..+..++++||..|++.
T Consensus 316 ~~~~~~davviGpGlg~~~~----~~~~~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEH----VREFVNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHH----HHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHH----HHHHHHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHH
Confidence 45678999988743222221 222222 445679999999842110 0 0 1112 122457899999999999
Q ss_pred ccCCCC----CChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccc
Q 016868 261 LTQGED----PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 336 (381)
Q Consensus 261 l~~~~~----~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~ 336 (381)
|+|... .+ .++++++.+.+- .+|+..|. +.++++.+.. ++.....+..+++|+||+|+|.+.+.+.+|.+
T Consensus 385 L~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~-~~vi~~~~~~-~~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~-- 458 (502)
T 3rss_A 385 LVKKTVGDVKYN-YELAEEFAKEND-CVLVLKSA-TTIVTDGEKT-LFNITGNTGLSKGGSGDVLTGMIAGFIAQGLS-- 458 (502)
T ss_dssp HHTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSS-SEEEECSSCE-EEECCCCGGGSSTTHHHHHHHHHHHHHHTTCC--
T ss_pred HhCCCccchHHH-HHHHHHHHHHcC-CEEEEeCC-CeEEEcCCEE-EEECCCCCccccCCchHHHHHHHHHHHhCCCC--
Confidence 998653 23 456667765432 35666664 4566666643 44444566789999999998888888889999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhc--CCCCCCCCHHHHHHHHh
Q 016868 337 QKEDQLRDALRFANACGALTVMER--GAIPALPTREAVLNAIH 377 (381)
Q Consensus 337 ~~~~~l~~al~~A~~~Aa~~~~~~--G~~~~~~~~~~v~~~l~ 377 (381)
+.+|+..|+..-+..-... |.. + .+..+|.+.+.
T Consensus 459 -----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp 494 (502)
T 3rss_A 459 -----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIP 494 (502)
T ss_dssp -----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9999999887766653322 322 2 46667766553
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.66 E-value=4.2e-07 Score=86.83 Aligned_cols=166 Identities=13% Similarity=0.067 Sum_probs=100.3
Q ss_pred cccCCChHHHHHHHHHHcCC-ceEEEeecCCChHHHHHHHHHHHCCCCCC-----Ce------e-ecCCCCceEEEEEec
Q 016868 89 KKAPGGAPANVAVGIARLGG-SSAFIGKVGADEFGYMLADILKENNVNGA-----GM------R-FDPGARTALAFVTLR 155 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~-----~v------~-~~~~~~t~~~~~~~~ 155 (381)
..+.||.+.-+|..|+++|. +|.+.+..+.. ...+.| ..+|-+- .+ . ..++.+.-.-+++-.
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~Ey 187 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEF 187 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEEE
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEEEc
Confidence 45799999999999999999 58888877664 333444 2222111 00 0 001122333333333
Q ss_pred CCCC---------------ceEEEecCCCc-cccCChhccch---hhcCCccEEEEccccccCc-----h----hHHHHH
Q 016868 156 SDGE---------------REFMFYRNPSA-DMLLQEAELDL---SLITKAKIFHYGSISLITE-----P----CKSAHI 207 (381)
Q Consensus 156 ~~g~---------------~~~~~~~~~~~-~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~-----~----~~~~~~ 207 (381)
+.|+ |-++..+..+. .... .+++.. +.-+.+|.++++|+..+.+ . ..+...
T Consensus 188 ~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~-~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~ 266 (474)
T 3drw_A 188 RKGLKFKLGDETIEIPNSGRFIVSARFESISRIET-REDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAK 266 (474)
T ss_dssp CTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSC-CTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHH
T ss_pred CCCCeeecCCceEEccCCCeEEEEcCCCCHHhccc-cHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHH
Confidence 3333 22333322222 2222 233331 2233689999999987665 1 123333
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC
Q 016868 208 AAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 264 (381)
Q Consensus 208 ~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 264 (381)
+.++..+..++++-|.... +.+.+.....+..+++.+|.+-+|+.|+..+.+.
T Consensus 267 e~i~~l~~~~~~iH~E~As----~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 267 EDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHHTTCEEEEECCC----CSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHHHHhcCCCCeEEEEeCc----cccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 5555666889999999864 3456666777888999999999999999988864
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=5.6e-06 Score=81.36 Aligned_cols=162 Identities=14% Similarity=-0.034 Sum_probs=101.6
Q ss_pred CChhccchhhcCC-ccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCE
Q 016868 174 LQEAELDLSLITK-AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADI 250 (381)
Q Consensus 174 ~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dv 250 (381)
..++++. +..+. ++.++++--.+ .+ .+.+..+++.+++.++++++||..-.. . ....+...++++ ..+|
T Consensus 294 ~~~~E~~-e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~-~~r~~~~~~Ll~~~~~~v 365 (540)
T 3nl6_A 294 EIQSEVN-DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---T-ETRLLLNNKLLTFGQFSC 365 (540)
T ss_dssp CCHHHHH-HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---S-HHHHHHHHHHTTSCCCSE
T ss_pred CCHHHHH-HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---c-cccHHHHHHHHhhCCCeE
Confidence 3344442 45666 78887764333 23 677788888889999999999964322 1 222345556776 7899
Q ss_pred EecCHHHHhhccCCCC--------------CChHHHHHHHHhcCCCEEEEEecCCceEEEeC------------------
Q 016868 251 IKISEEEISFLTQGED--------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK------------------ 298 (381)
Q Consensus 251 l~~N~~E~~~l~~~~~--------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~------------------ 298 (381)
+++|..|+..|+|... .+..++++.+.+..-..|++ .|+. -++.++
T Consensus 366 ItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvl-kG~~-D~I~dg~~~~~~~~~~~~~~~~~~ 443 (540)
T 3nl6_A 366 IKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVC-TGEF-DFIADGTIEGKYSLSKGTNGTSVE 443 (540)
T ss_dssp EEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEE-CSSS-EEEEECCGGGBCCSSSCCSSCCTT
T ss_pred ECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEE-cCCC-eEEECCCccccccccccccccccC
Confidence 9999999999998642 11123456666644444444 4433 344444
Q ss_pred -CceEEEcccc-ccccCCCCccHHHHHHHHHHHHcCC---ccccchHHHHHHHHHHHHH
Q 016868 299 -DFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDF---SLLQKEDQLRDALRFANAC 352 (381)
Q Consensus 299 -~~~~~~~~~~-v~vvdttGAGDaF~ag~l~~l~~g~---~~~~~~~~l~~al~~A~~~ 352 (381)
+..+.++.-. .-.-.++|.||++.+.+.+.+..+. + +.+|+..|...
T Consensus 444 ~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 444 DIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp SSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred CccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 3444554433 2223469999999998888888876 5 66676665543
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.5e-05 Score=76.39 Aligned_cols=161 Identities=10% Similarity=0.141 Sum_probs=98.1
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCCCeee-------------cCCCCceEEEEEec
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGAGMRF-------------DPGARTALAFVTLR 155 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~v~~-------------~~~~~t~~~~~~~~ 155 (381)
+.||.+..+|..|+++|.++.+ ++.+|.. +.+.|...+|.+ ... ....+....+++-.
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~--p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef 181 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYV--PTLENGEVKLIHPKEFSGDEENCIHYIYEF 181 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEE--EEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEe--ecccCCccccccchhhccCCCCCceEEEEc
Confidence 8999999999999999999988 7776652 444443223322 001 01234555556555
Q ss_pred CCCCc----------eEEEecCCCccccCChhccch---hhcCCccEEEEccccccCchh----HHHHHHHHHHHHHCCC
Q 016868 156 SDGER----------EFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGV 218 (381)
Q Consensus 156 ~~g~~----------~~~~~~~~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~ 218 (381)
+.|++ +|+...+.........+++.. +...++|.+.++|+..+.+.+ .+...+.++..++.++
T Consensus 182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 182 PRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp CTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 66652 333332222111112233321 223459999999998766532 2222222223467789
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
++-|+.... .+.+.....+ .+++++|.+-+|+.|+..+.+
T Consensus 262 ~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 262 PVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp CEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred eEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 999998743 3455556666 999999999999999987754
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.9e-05 Score=70.24 Aligned_cols=144 Identities=16% Similarity=0.032 Sum_probs=84.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~ 260 (381)
+..+.++.+.++--. +++...+.+....+.+.+.++|+++||..-.. .. ...+...+++ ..++++++|..|+..
T Consensus 52 e~~~~a~al~iNiGt-l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~-~R~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECCC-CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cH-HHHHHHHHHHhcCCcEEcCCHHHHHH
Confidence 444556666654322 34445566777788899999999999964322 11 1122333333 368999999999999
Q ss_pred ccCCCCC---------Ch---HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 261 LTQGEDP---------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 261 l~~~~~~---------~~---~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|.|.... .. .++++.+.++.-..|++ .|+ .-++.++++.+.++.-..-.-..+|.||++.|.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvl-kG~-~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAV-TGA-VDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEE-ESS-SEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEE-eCC-CeEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 9864211 11 23445565443334444 453 3455665655555443322333489999987665555
Q ss_pred HHcC
Q 016868 329 LSTD 332 (381)
Q Consensus 329 l~~g 332 (381)
+..+
T Consensus 205 lA~~ 208 (265)
T 3hpd_A 205 VAVT 208 (265)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 5565
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.06 E-value=8.3e-05 Score=71.11 Aligned_cols=161 Identities=7% Similarity=0.097 Sum_probs=94.9
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCceEEEEEecCC
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGA-----GMRF------DPGARTALAFVTLRSD 157 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~-----~v~~------~~~~~t~~~~~~~~~~ 157 (381)
+.||.+.-+|..|+.+|.++.+ ++.+|. ...+.|...+|.+- .+.. ..+.+.-..+++-.+.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999987 665554 34444432333210 0000 0012344444444444
Q ss_pred CC----------ceEEEecC-CCccccCChhccch---hhcCCccEEEEccccccCc-----hhHHH-HH---HHHHHHH
Q 016868 158 GE----------REFMFYRN-PSADMLLQEAELDL---SLITKAKIFHYGSISLITE-----PCKSA-HI---AAAKAAK 214 (381)
Q Consensus 158 g~----------~~~~~~~~-~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~-----~~~~~-~~---~~l~~a~ 214 (381)
|+ .+|+...+ .+..... .+++.. +...++|.++++|+.++.+ ...+. +. +.++...
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~ 270 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYM-RREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN 270 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCC-CHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccc-cHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence 44 23333222 2222222 222221 2335699999999977655 21222 22 2333335
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
..++++-+.... +.+.+-....+ .+++++|.+-+|+.|+..++
T Consensus 271 ~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 271 RYNVKSHFEFAY----TANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HTTCEEEEECCC----CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred CCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 678999999864 34566666777 99999999999999998544
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.04 E-value=0.0001 Score=70.42 Aligned_cols=160 Identities=11% Similarity=0.109 Sum_probs=92.9
Q ss_pred cCCChHHHHHHHHHHcCCceEE--EeecCCChHHHHHHHHHHHCCCCCC-----Ceee------cCCCCceEEEEEecCC
Q 016868 91 APGGAPANVAVGIARLGGSSAF--IGKVGADEFGYMLADILKENNVNGA-----GMRF------DPGARTALAFVTLRSD 157 (381)
Q Consensus 91 ~~GG~~~NvA~~la~LG~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~-----~v~~------~~~~~t~~~~~~~~~~ 157 (381)
+.||.+.-+|..|+++|.++.+ ++.+|. ...+.|...+|.+- .+.. ..+.+.-.-+++-.+.
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~~ 186 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFPR 186 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEECT
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999887 565554 34444432222210 0000 0011223333333333
Q ss_pred CC-----------ceEEEecCCCccccCChhccch---hhcCCccEEEEccccccCchh----HHHHHHHHHHHHHCCCe
Q 016868 158 GE-----------REFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVV 219 (381)
Q Consensus 158 g~-----------~~~~~~~~~~~~~~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~~ 219 (381)
|+ |-+...+..+..... .+++.. +...++|.++++|+..+.+.. .+...+.++..+..+++
T Consensus 187 G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 187 NFKVLDFEAPRENRFIGAADDYNPILYV-REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TCEETTEECSSCEEEEEEECSSGGGTCC-CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeecceecCCCCeEEEEcCCCCCCCcc-cHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 33 333333222222222 223221 333569999999998766511 11122333344778999
Q ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 220 LSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 220 v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+-+.... +.+.+-....+ .+++++|.+-+|+.|+..+
T Consensus 266 iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l 302 (457)
T 1l2l_A 266 AHLEFAF----TPDEVVRLEIV-KLLKHFYSVGLNEVELASV 302 (457)
T ss_dssp EEEECCC----CSSHHHHHHHH-HHGGGCSEEEECHHHHHHH
T ss_pred EEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHH
Confidence 9999864 33455666777 9999999999999999875
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0011 Score=63.99 Aligned_cols=167 Identities=18% Similarity=0.105 Sum_probs=96.9
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC
Q 016868 185 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 264 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~ 264 (381)
++++.+.++.-.-.++ . + +.++++ . + ++++|-.- ++. ..+.+.++...|++||..|++.|++.
T Consensus 291 ~~~~a~~iGPGlG~~~-~-~-l~~~l~---~-~-p~VlDADa---L~~------~~~~~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 291 NLLSAFALGMGLENIP-K-D-FNRWLE---L-A-PCVLDAGV---FYH------KEILQALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp SSCSEEEECTTCSSCC-T-T-HHHHHH---H-S-CEEEEGGG---GGS------GGGGTTTTSSEEEECCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCH-H-H-HHHHHh---c-C-CEEEECcc---cCC------chhhhccCCCEEECCCHHHHHHHhCC
Confidence 5678888764322222 1 2 334442 2 4 99999741 100 01112334568999999999999875
Q ss_pred -----CCCC----hHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 265 -----EDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 265 -----~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
+..+ ..++++++.+.....+|+-.|.. .++++++.. ++......-..+.|.||++++.+.+.+.+|.+
T Consensus 354 ~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~-~vI~~~~~~-~~~~~g~~~mat~GtGdvLsg~Iaa~lA~g~~- 430 (475)
T 3k5w_A 354 VGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN-TLIAHQGQV-FINILGSVALAKAGSGDVLAGLILSLLSQNYT- 430 (475)
T ss_dssp TSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS-EEEEETTEE-EEECCCCGGGCSTTHHHHHHHHHHHHHHTTCC-
T ss_pred ccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC-CEEECCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHcCCC-
Confidence 3221 12455677665423344444533 344554433 33333334557899999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 336 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+.+|+..|...-+..-.......+ ....+|-+.+.+
T Consensus 431 ------~~~Aa~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 431 ------PLDAAINASLAHALASLEFKNNYA-LTPLDLIEKIKQ 466 (475)
T ss_dssp ------HHHHHHHHHHHHHHGGGGCSSTTC-CCHHHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHhccCCC-cCHHHHHHHhhh
Confidence 888888776655444333211123 467778776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 381 | ||||
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 2e-53 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 2e-49 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 8e-48 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 8e-47 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 2e-42 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 5e-42 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 2e-40 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 9e-40 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 9e-32 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 1e-31 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 5e-31 | |
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 9e-28 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 6e-27 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 0.002 |
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 177 bits (448), Expect = 2e-53
Identities = 102/314 (32%), Positives = 153/314 (48%), Gaps = 13/314 (4%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
V G+ +D VP ++ K PGGA ANV V +ARLGG FIG +G D+ G
Sbjct: 3 VWVIGDASVDLVPEKQN-------SYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAG 55
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
L + ++N V+ +R D +A+ V L +DGER F + +P AD + DL
Sbjct: 56 RFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLP 113
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 242
+ + F++ SI L P + A + A+ ++AG + +D NLR +W + D+ E I
Sbjct: 114 PFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIA 173
Query: 243 SIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG 302
A I K+S +E+ L+ D Y L +++ G DG T +
Sbjct: 174 RSAALASICKVSADELCQLSGASHWQDAR--YYLRDLGCDTTIISLGADGALLITAEGEF 231
Query: 303 RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362
+V+ VD TGAGDAFV G+L LS L +A+ ANACGA+ V +GA
Sbjct: 232 HFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCW--DHALLAEAISNANACGAMAVTAKGA 289
Query: 363 IPALPTREAVLNAI 376
+ ALP + + +
Sbjct: 290 MTALPFPDQLNTFL 303
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 167 bits (423), Expect = 2e-49
Identities = 62/333 (18%), Positives = 113/333 (33%), Gaps = 33/333 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV FGE+++ P + ++ +F GGA ANVA +A++G + F+ K+ + G
Sbjct: 6 VVTFGEIMLRLSPPDHK-RIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLG 64
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
A L++ V + S + ++ R SA + + D
Sbjct: 65 DAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWE 124
Query: 183 LITKAKIFHYGSISL--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREG 240
I + + S + + A K A + GV +S D N R + ++A++
Sbjct: 125 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRAR-LWTKEEAQKV 183
Query: 241 ILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLL--------------- 285
++ E D++ +EE+I + D KL +
Sbjct: 184 MIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGIT 243
Query: 286 ------VTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 339
T + ++ VD GAGD+F ++ F
Sbjct: 244 LRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD----- 298
Query: 340 DQLRDALRFANACGALTVMERGAIPALPTREAV 372
+ FA A L G + + E +
Sbjct: 299 --SQKKAEFAAAASCLKHTIPGDFV-VLSIEEI 328
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 162 bits (410), Expect = 8e-48
Identities = 88/311 (28%), Positives = 122/311 (39%), Gaps = 18/311 (5%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
VV GE L+ VP G L + GGA NVAV +ARLG F+G+VG DE G
Sbjct: 4 VVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELG 62
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
M+ + L+ V+ R PG G+ +YR SA L D
Sbjct: 63 AMVEERLRAEGVDLTHFRRAPGFTGLYLREY-LPLGQGRVFYYRKGSAGSALAPGAFDPD 121
Query: 183 LITKAKIFHYGSISLIT-EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGI 241
+ + H I+ ++ + A + AK GV +S D N R LW + AR +
Sbjct: 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEE-ARGFL 180
Query: 242 LSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301
D++ +SEEE L + + +++ G G +
Sbjct: 181 ERALPGVDLLFLSEEEAELLFGRVEEALR-------ALSAPEVVLKRGAKGAWAFVDGRR 233
Query: 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 361
VEAVD GAGDAF AG L+ + + LR AN GA RG
Sbjct: 234 VEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRG 286
Query: 362 AIPALPTREAV 372
P RE +
Sbjct: 287 DHEGAPYREDL 297
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 160 bits (403), Expect = 8e-47
Identities = 86/316 (27%), Positives = 132/316 (41%), Gaps = 15/316 (4%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
++ GE+LI+F G L F+K G+ AN V + G I KVG DEFG
Sbjct: 3 LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFG 61
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDG--EREFMFYRNPSADMLLQEAELD 180
Y + L+ V+ + M+ DP A T + F+ + E ++YR SA L ++D
Sbjct: 62 YNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD 121
Query: 181 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREG 240
+ A + H I+L + A + S+D N+RL LW + + RE
Sbjct: 122 EEYVKSADLVHSSGITLAISSTAKEAV---YKAFEIASNRSFDTNIRLKLWSAEEAKREI 178
Query: 241 ILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF 300
+ + + I++ + S + GE D A F +++++ GP G Y
Sbjct: 179 LKLLSKFHLKFLITDTDDSKIILGESDPDKAAKA--FSDYAEIIVMKLGPKGAIVYYDGK 236
Query: 301 SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 360
G +V D TGAGDA LS F + AL +A L VM R
Sbjct: 237 KYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIR 289
Query: 361 GAIPALPTREAVLNAI 376
G LPT + + +
Sbjct: 290 GDQENLPTTKDIETFL 305
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 148 bits (374), Expect = 2e-42
Identities = 75/321 (23%), Positives = 128/321 (39%), Gaps = 29/321 (9%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
+V G + D + + ++ A GG AN AV R G + AFI G
Sbjct: 4 LVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGD 63
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D G + L +N++ + G T +A + + +GE + +A +
Sbjct: 64 DSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAAL-----S 118
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
L + +I + ++ + E + +AAAK A +++ +P L
Sbjct: 119 PALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPD------ 172
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDGCRY 295
+ DII +E E LT D+ L ++ +L+T G G
Sbjct: 173 ----ELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWA 228
Query: 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 355
RV G +V+AVD AGD F +++ L + L +A+RFA+A A+
Sbjct: 229 SVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAI 281
Query: 356 TVMERGAIPALPTREAVLNAI 376
V +GA P++P RE + +
Sbjct: 282 AVTRKGAQPSVPWREEIDAFL 302
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 5e-42
Identities = 68/316 (21%), Positives = 125/316 (39%), Gaps = 22/316 (6%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGA 118
VV G + D V S L F GG AN V ARLG ++ + KVG
Sbjct: 4 VVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGK 63
Query: 119 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 178
D FG + LK+N+++ A T A + + ++G+ + + + ++
Sbjct: 64 DSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLR 123
Query: 179 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAR 238
++I++AK+ + + A A+ +GV ++P +
Sbjct: 124 AAANVISRAKVMVCQLE-----ITPATSLEALTMARRSGVKTLFNPAPAIADL------D 172
Query: 239 EGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298
++ + + E ++ LT G L +++++T G +GC ++
Sbjct: 173 PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQ 232
Query: 299 --DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 356
+ KV+AVD TGAGD+FV + L+ L D L +N A++
Sbjct: 233 TEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLA-----YYPNLSLEDMLNRSNFIAAVS 287
Query: 357 VMERGAIPALPTREAV 372
V G + P ++ +
Sbjct: 288 VQAAGTQSSYPYKKDL 303
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 142 bits (359), Expect = 2e-40
Identities = 60/319 (18%), Positives = 112/319 (35%), Gaps = 32/319 (10%)
Query: 63 VVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSS-AFIGKVG 117
+ G ID V V + ++ PGG AN AV +A++G F+ +G
Sbjct: 5 ISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIG 64
Query: 118 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA 177
D++ +L + ++ + G P R F+ + G+ + + +A+ L++
Sbjct: 65 NDDYSDLLIENYEKLGITGYIRVSLPTGRA---FIEVDKTGQNRIIIFPGANAE--LKKE 119
Query: 178 ELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKA 237
+D + ++++ I + + A D + + ++ D
Sbjct: 120 LIDWNTLSESDILLLQNEIPFETTLECAKRFNGIVIFDP----APAQGINEEIFQYLDYL 175
Query: 238 REGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYT 297
I + + K +K ++V G G
Sbjct: 176 TPNEKEIEALSKDFFGEFLT-----------VEKAAEKFLELGVKNVIVKLGDKGVLLVN 224
Query: 298 KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 357
K+ KV+AVD T AGD F LS + +A+ F A A++V
Sbjct: 225 KNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNP-------EEAVIFGTAAAAISV 277
Query: 358 MERGAIPALPTREAVLNAI 376
GA ++P RE V +
Sbjct: 278 TRLGAQSSIPAREEVEAFL 296
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 140 bits (354), Expect = 9e-40
Identities = 45/305 (14%), Positives = 84/305 (27%), Gaps = 36/305 (11%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFG 122
+ G + D V V G + A GG A+ + LG + I K ++
Sbjct: 9 ITFIGHVSKD-VNVVDG-------KREIAYGGGVVMGAITSSLLGVKTKVITKCTREDVS 60
Query: 123 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
L++N V ++ + SD + F + + +
Sbjct: 61 KF--SFLRDNGVEVVFLKSPRTTSIENRYG---SDPDTRESFLISAADPFTESDLAFI-- 113
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP---LWPSADKARE 239
+ + H + P + + LS D + + E
Sbjct: 114 ---EGEAVHINPLWYGEFP-----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 165
Query: 240 GILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
+ D+ K+ E LT D + + + F A +
Sbjct: 166 MKEKYLKYLDLFKVDSREAETLTGTNDLRESCRIIRSFGAKII----LATHASGVIVFDG 221
Query: 300 FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 359
TG GD A L + K+ + A +FA A ++ +
Sbjct: 222 NFYEASFRSWSLEGRTGRGDTCTAAFL------VGFVFKKMSIEKATKFAAAVTSVKMRH 275
Query: 360 RGAIP 364
G +
Sbjct: 276 PGPLR 280
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 120 bits (300), Expect = 9e-32
Identities = 44/314 (14%), Positives = 100/314 (31%), Gaps = 30/314 (9%)
Query: 71 IDFVPTVSGLSLAE------SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYM 124
+D + + + +PGG NV++ +++LG S G VG G +
Sbjct: 11 LDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVG-GYMGKI 69
Query: 125 LADILKENNVN--GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS 182
L + L++ + + + R + + ++ F DM +
Sbjct: 70 LVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYK 129
Query: 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL 242
+ S S+ + + A++ GV + + + E I
Sbjct: 130 MTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQT---------PRLLERIY 180
Query: 243 SIWETADIIKIS---EEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKD 299
E +++K + D + + ++ +V+ T++
Sbjct: 181 EGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVATRE 240
Query: 300 -FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 358
+++ GAGDA+VAG++ ++ + +F A
Sbjct: 241 GVWLIRSKEEIDTSHLLGAGDAYVAGMVY------YFIKHGANFLEMAKFGFASALAATR 294
Query: 359 ERGAIPALPTREAV 372
+ +P EA+
Sbjct: 295 RKEK--YMPDLEAI 306
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 119 bits (299), Expect = 1e-31
Identities = 56/309 (18%), Positives = 100/309 (32%), Gaps = 19/309 (6%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLAD 127
ID + L L + K PGG NV I LGG G +G G +A+
Sbjct: 11 IDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLG-GFHGAFIAN 69
Query: 128 ILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKA 187
LK+ N+ A R ++A + + E + + + + + K
Sbjct: 70 ELKKANIPQAFTSIKEETRDSIAIL--HEGNQTEILEAGPTVSPEEISNFLENFDQLIKQ 127
Query: 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 247
S SL + + A V + D + + ++
Sbjct: 128 AEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLQGPWKPYLIKPNLE 187
Query: 248 ADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL 307
+ ++ K A ++ ++++ G DG D RV+
Sbjct: 188 ELEGLLGQDFSENPLAAVQTAL----TKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIP 243
Query: 308 KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367
++A + G+GDA +AG+ L+ D + L++ A G ER
Sbjct: 244 TIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT--GHV 294
Query: 368 TREAVLNAI 376
E V +
Sbjct: 295 DVENVKKHL 303
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 117 bits (294), Expect = 5e-31
Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 27/305 (8%)
Query: 71 IDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLAD 127
ID++ V S +K PGG NV+ + RLG + +G +G G + +
Sbjct: 11 IDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGGF-TGAYVRN 69
Query: 128 ILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKA 187
L++ + + + + R V ++ E E +Q L+ + K
Sbjct: 70 ALEKEEIGLSFIEVEGDTRI---NVKIKGKQETELNGTAPLIKKEHVQALLEQLTELEKG 126
Query: 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 247
+ + S+ ++ + + + AK+ G ++ D + A K + E
Sbjct: 127 DVLVL-AGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHEVLAAKPSFIKPNHHEL 185
Query: 248 ADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL 307
++++ V +L ++ +LV+ DG + + + V
Sbjct: 186 SELVSK--------PIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVP 237
Query: 308 KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367
E ++ GAGD+ VAG L+ L S L DA+ FA A G+ T G
Sbjct: 238 SGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSDG----FC 286
Query: 368 TREAV 372
TRE V
Sbjct: 287 TREEV 291
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (273), Expect = 9e-28
Identities = 53/349 (15%), Positives = 109/349 (31%), Gaps = 53/349 (15%)
Query: 61 PLVVCFGEMLIDFVPTVS------------------------GLSLAESPAFKKAPGGAP 96
++ G L+D V L + + GG+
Sbjct: 4 NILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGST 63
Query: 97 ANVAVGIARLG----GSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFV 152
N + ++ F G +G D+FG +L E +V+ +
Sbjct: 64 QNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGT-CAA 122
Query: 153 TLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212
+ D + + +L+ + + K + + A
Sbjct: 123 CITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHH 182
Query: 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD-- 270
A + + + + + + +E ++ + DI+ +E E + + +
Sbjct: 183 ASENNRIFTLNLSA----PFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDI 238
Query: 271 -------AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL---KVEAVDATGAGDA 320
+ K+ ++++ T+G D T+ L + E +D GAGDA
Sbjct: 239 KEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDA 298
Query: 321 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA-IPALPT 368
FV G LSQL +D L + +R + ++ + G P P
Sbjct: 299 FVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCTFPEKPD 340
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 107 bits (267), Expect = 6e-27
Identities = 60/356 (16%), Positives = 112/356 (31%), Gaps = 72/356 (20%)
Query: 63 VVCFGEMLIDFVPTVSGLSLAE-----------------------SPAFKKAPGGAPANV 99
V G ++D V V L E PGG+ N
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNS 65
Query: 100 AVGIARL---GGSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRS 156
+ +L GS+ ++G +G D G +L ++ + + PG T + V +
Sbjct: 66 VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLA-TRFMVAPGQSTGVCAVLINE 124
Query: 157 DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA 216
+ L ++ + Y + +T K+A A A
Sbjct: 125 KERTLCTHLGACGSFRLPEDWTTF----ASGALIFYATAYTLTATPKNALEVAGYAHGIP 180
Query: 217 GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA----- 271
+ + + + + ++ + S+ +I+ +EEE + L + +
Sbjct: 181 NAIFTLNLSA----PFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 236
Query: 272 -----------------VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV----- 309
+ + KL+++T G + + G V +V
Sbjct: 237 TANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVV 296
Query: 310 ---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 362
+ VD GAGDAFV G L LS + ++ + NAC + G
Sbjct: 297 AAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGF 345
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 37.1 bits (85), Expect = 0.002
Identities = 20/116 (17%), Positives = 35/116 (30%), Gaps = 20/116 (17%)
Query: 249 DIIKISEEEISFLTQGEDPYDDAVVY---KLFHANLKLLLVTEGPDG--------CRYYT 297
DII + E+ L + + V +L +++LV T
Sbjct: 141 DIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVT 200
Query: 298 KD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 351
D + + G GD +L +L + L++AL A
Sbjct: 201 ADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGAT-------LQEALEHVTA 249
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 100.0 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.69 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.52 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.48 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.45 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.8 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.48 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.38 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 98.35 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 98.03 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 98.0 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.93 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.67 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 81.38 |
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.8e-46 Score=342.82 Aligned_cols=301 Identities=30% Similarity=0.429 Sum_probs=259.2
Q ss_pred CCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
|++|+|||++++|+++..++. ......+..++||+|.|+|.+|++||.+|.++|.+|+|.+|+++++.|++.||++.++
T Consensus 1 ~~~i~viG~~~vD~~~~~~~~-~~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~~~~iG~D~~g~~i~~~l~~~gi~~~~~ 79 (302)
T d1v19a_ 1 MLEVVTAGEPLVALVPQEPGH-LRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHF 79 (302)
T ss_dssp CCSEEEESCCEEEEEESSSSC-GGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHHTCBCTTE
T ss_pred CCeEEEECcceEEEecCCCCc-eeecceEEEecCcHHHHHHHHHHHcCCCEEEEEEEcCCcccccchhhhhhcccccchh
Confidence 478999999999999875543 2245567889999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCCC
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAGV 218 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~ 218 (381)
...+. +++.+++.++.+|++++...........++.+......++++++++...+.. ..+...+....+++..++.++
T Consensus 80 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T d1v19a_ 80 RRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGV 158 (302)
T ss_dssp EEESS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETHHHHHCHHHHHHHHHHHHHHHTTTC
T ss_pred ccccc-cccccchhhccccccccccccccccchhhccccccHHHHhcccEEeeeccccccchhHHHHHHHHHHHHHhcCC
Confidence 87765 5667777788899998887766666666777777777889999999887644 345556777888999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeC
Q 016868 219 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK 298 (381)
Q Consensus 219 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 298 (381)
.+.+|++.++..+. .......+...++.+|++++|++|++.+.+... +.+...+.+.+|||+|++|++++.+
T Consensus 159 ~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~~-------~~~~~~~~~~viit~G~~G~~~~~~ 230 (302)
T d1v19a_ 159 RVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRVE-------EALRALSAPEVVLKRGAKGAWAFVD 230 (302)
T ss_dssp EEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSTT-------HHHHHTCCSEEEEECTTSCEEEEET
T ss_pred ccccccchhhhccc-hhhhHHHHHhhhhhccchhhhhhhhhhhhhhhh-------hhhhhccceEEEEecCCCCCccccc
Confidence 99999987766543 345566777889999999999999988776533 2445678999999999999999999
Q ss_pred CceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 299 DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 299 ~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
++.+++|+++++++|||||||+|+|||+|++++|++ +++|+++|+++|++++++.|+.+++|+++||+.+|+
T Consensus 231 ~~~~~~p~~~v~vvDttGAGDaf~a~~~~~~~~g~~-------~~~a~~~a~~~Aa~~v~~~G~~~~~p~~~~i~~~l~ 302 (302)
T d1v19a_ 231 GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK 302 (302)
T ss_dssp TEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHHCC-
T ss_pred cccccccccccccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhC
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999874
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=4.9e-45 Score=335.73 Aligned_cols=303 Identities=33% Similarity=0.526 Sum_probs=259.2
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|+|||++++|+++... ..+...+||++.|+|.+|++||.+|.++|.+|+|.+|+++++.|++.||+++++..
T Consensus 2 ki~viG~~~~D~i~~~~-------~~~~~~~GG~~~NvA~~l~~lG~~v~~v~~vG~D~~g~~i~~~L~~~gi~~~~v~~ 74 (304)
T d1tyya_ 2 KVWVIGDASVDLVPEKQ-------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRL 74 (304)
T ss_dssp CEEEESCCEEEEEECSS-------SEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEE
T ss_pred eEEEECccEEEEecCCC-------CeEEEccCcHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHhhhccccccccccc
Confidence 79999999999987643 23456799999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEE
Q 016868 142 DPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLS 221 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~ 221 (381)
.+..+++.++...+.+|++++...+.......+.+.+. ..+...+++++.+..+......+...++++.+++.+++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 152 (304)
T d1tyya_ 75 DADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL--PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVL 152 (304)
T ss_dssp CTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC--CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cccccccceeeEeecccccccceecccccccccchhhh--hhhccceEEEEecccccccchHHHHHHHHHHhhhcCceEe
Confidence 99988999988888899998887766666655555544 3456778888888777777778888899999999999999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEEEeCCce
Q 016868 222 YDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFS 301 (381)
Q Consensus 222 ~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 301 (381)
+|++.+..+|.........+.+.+...+....+..+.......... ..+.+.+.+++++.+|||+|++|++++++++.
T Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~g~~~vivt~G~~Ga~~~~~~~~ 230 (304)
T d1tyya_ 153 FDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLGCDTTIISLGADGALLITAEGE 230 (304)
T ss_dssp EECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGTCSCEEEECGGGCEEEESSSCE
T ss_pred eccccccccccchhhhhhhhhhcccccccccccccccccccccchH--HHHHHHHHhcccceeeeecccceeeeeccCCc
Confidence 9999988888888788888888899999999999988777665543 33455667789999999999999999999999
Q ss_pred EEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHh
Q 016868 302 GRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 377 (381)
Q Consensus 302 ~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~l~ 377 (381)
+++|+++++++||+||||+|+|||++++++|++ .+..++++|+++|+++|++++++.|+.+++|+++||+++|.
T Consensus 231 ~~~p~~~v~vvdt~GAGDaf~ag~~~~l~~g~~--~~~~~l~~al~~a~~~As~~v~~~G~~~~~P~~~ev~~~l~ 304 (304)
T d1tyya_ 231 FHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANC--WDHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS 304 (304)
T ss_dssp EEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSS--CCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHHHHHHHC
T ss_pred cccCcccccCCCCCCchHHHHHHHHHHHHhCCC--ccchHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHhhC
Confidence 999999999999999999999999999999987 35667899999999999999999999999999999999974
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=3.5e-43 Score=324.18 Aligned_cols=301 Identities=29% Similarity=0.454 Sum_probs=245.1
Q ss_pred cEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCeee
Q 016868 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGMRF 141 (381)
Q Consensus 62 ~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~ 141 (381)
+|++||++++|++...++. ..+...+..++||++.|+|.+|++||.++.++|.+|+|.+|+++++.|+++||+++++.+
T Consensus 2 ki~~iG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~vG~D~~g~~i~~~L~~~gI~~~~i~~ 80 (308)
T d2dcna1 2 KLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKI 80 (308)
T ss_dssp EEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCEE
T ss_pred EEEEECcceEEEecCCCCc-eeecceeEEecCcHHHHHHHHHHHCCCCEEEEEEeCCcccccccccccccccccccceee
Confidence 7999999999998765443 335666788999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEEecC---CCCceEEEecCCCccccCChhccchhhcCCccEEEEccccc-cCchhHHHHHHHHHHHHHCC
Q 016868 142 DPGARTALAFVTLRS---DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL-ITEPCKSAHIAAAKAAKDAG 217 (381)
Q Consensus 142 ~~~~~t~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g 217 (381)
.++.+|+++++..+. ++++.+ ++....+......++.....+..+++++.+.+.+ ..+.+.+. +..+.+.+
T Consensus 81 ~~~~~t~~~~i~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 155 (308)
T d2dcna1 81 DPSAPTGIFFIQRHYPVPLKSESI-YYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEA----VYKAFEIA 155 (308)
T ss_dssp ETTSCCCEEEEEESCSSTTCEEEE-EECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHH----HHHHHHHC
T ss_pred eecccceEEEEEeccccccccccc-eeeecccccccccccccccccccceEEEeeccccccccchhHH----HHHHHhhc
Confidence 999999999887542 233333 3335566667777777778889999999887654 23333333 33344455
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceEE
Q 016868 218 VVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRY 295 (381)
Q Consensus 218 ~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 295 (381)
....+|...+...|.......+. ...+. ..+.+.+|++|.+.+.+.... +.+.+++..+++.|+||+|++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~vvvt~G~~G~~~ 231 (308)
T d2dcna1 156 SNRSFDTNIRLKLWSAEEAKREI-LKLLSKFHLKFLITDTDDSKIILGESDP---DKAAKAFSDYAEIIVMKLGPKGAIV 231 (308)
T ss_dssp SSEEEECCCCTTTSCHHHHHHHH-HHHHHHCCEEEEEEEHHHHHHHHSCCCH---HHHHHHHTTTEEEEEEEEETTEEEE
T ss_pred cccccccceeccccchhhhhhhh-hhhccccccccccchhhhhhhhcchhhh---hhhhhhcccceeEEeeccccCceee
Confidence 66778888777766544333333 33333 357788999999998876653 3344566778999999999999999
Q ss_pred EeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHH
Q 016868 296 YTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 375 (381)
Q Consensus 296 ~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~~~ 375 (381)
+.+++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+.+|++++
T Consensus 232 ~~~~~~~~~~~~~v~vvDt~GAGDaf~ag~i~~l~~g~~-------~~~a~~~a~~~aa~~~~~~G~~~~~p~~~~~~~~ 304 (308)
T d2dcna1 232 YYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLNVMIRGDQENLPTTKDIETF 304 (308)
T ss_dssp EETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred ecCCcccccccceeeecCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCCCcCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HhCC
Q 016868 376 IHAP 379 (381)
Q Consensus 376 l~~~ 379 (381)
|+++
T Consensus 305 l~~~ 308 (308)
T d2dcna1 305 LREM 308 (308)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 9875
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.5e-43 Score=324.27 Aligned_cols=291 Identities=23% Similarity=0.337 Sum_probs=247.2
Q ss_pred CCCcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCc-eEEEeecCCChHHHHHHHHHHHCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKVGADEFGYMLADILKENN 133 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~-v~li~~vG~D~~g~~i~~~l~~~g 133 (381)
|.|+|+|||++++|++..+++.|.+ .+..+..++||++.|+|.+|++||.+ |.|+|.+|+|.+|+++++.|++.|
T Consensus 1 ~~m~I~ViG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~i~~vG~D~~g~~~~~~l~~~g 80 (299)
T d1vm7a_ 1 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLG 80 (299)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTT
T ss_pred CeeEEEEeCeeeEEEEEEeCCCCCCCcEEeeeeEEEecCCHHHHHHHHHHHcCCCceEEEEeeeccchhHHHHHHHhhhc
Confidence 5689999999999999988887765 24557889999999999999999997 899999999999999999999999
Q ss_pred CCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHH
Q 016868 134 VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAA 213 (381)
Q Consensus 134 i~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 213 (381)
|++..+ ...+|+.+.+.++.+|++++..+ ......++.++++...+...+++++.+... .....+..
T Consensus 81 v~~~~~---~~~~t~~~~i~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 147 (299)
T d1vm7a_ 81 ITGYIR---VSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQNEIP--------FETTLECA 147 (299)
T ss_dssp EEEEEE---CSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECSSSC--------HHHHHHHH
T ss_pred cccccc---cccccceeEEEecCCCCeeEecc--CCcchhCCHhHhChhhcccccceeeccccc--------chhhhHhh
Confidence 987643 24578899999999999998876 345556888888888888899999876532 11234456
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCC---CCCChHHHHHHHHhcCCCEEEEEecC
Q 016868 214 KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG---EDPYDDAVVYKLFHANLKLLLVTEGP 290 (381)
Q Consensus 214 ~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~ 290 (381)
.+.+..+++|+......+ ..+++.+|++++|.+|+....+. ...+.+...+.+.+.+.+.+++|+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vvvt~G~ 217 (299)
T d1vm7a_ 148 KRFNGIVIFDPAPAQGIN----------EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGD 217 (299)
T ss_dssp HHCCSEEEECCCSCTTCC----------GGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGG
T ss_pred hhcCceEEEecCcchhhh----------HHHHhhcccccccHHHHHhhhccccccchhhhhhhhhhhcCCCcEEEEeCCC
Confidence 778999999987544322 13578899999999998876542 23334556678889999999999999
Q ss_pred CceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHH
Q 016868 291 DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTRE 370 (381)
Q Consensus 291 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~ 370 (381)
+|++++.+++.+++++++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|+.+++|+++
T Consensus 218 ~g~~~~~~~~~~~~~~~~~~vvDttGAGDaf~Ag~i~~l~~g~~-------~~~al~~a~~~aa~~~~~~G~~~~~p~~~ 290 (299)
T d1vm7a_ 218 KGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTAAAAISVTRLGAQSSIPARE 290 (299)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTTSSSSGGGCCCHH
T ss_pred CceEEEeccceEEEeeeeeeeECCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCcCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999 99999999999999999999998999999
Q ss_pred HHHHHHhCC
Q 016868 371 AVLNAIHAP 379 (381)
Q Consensus 371 ~v~~~l~~~ 379 (381)
||+++|+++
T Consensus 291 ei~~~lk~~ 299 (299)
T d1vm7a_ 291 EVEAFLKNL 299 (299)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999999875
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-42 Score=317.95 Aligned_cols=294 Identities=26% Similarity=0.343 Sum_probs=240.6
Q ss_pred CcEEEEccceeecccCCCCCCcc----CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~----~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
-+|+|+|++++|++..+++.|.+ ....+...+||++.|+|++|++||.+|.++|.+|+|.+|+.+++.|++.|+++
T Consensus 2 ~~IlviG~~~~D~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~v~~~~~vG~d~~~~~~~~~l~~~gi~~ 81 (306)
T d1rkda_ 2 GSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDI 81 (306)
T ss_dssp CEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEEC
T ss_pred CEEEEEceeeEEEEEeeCCCCCCCceEeeceEEEecCCHHHHHHHHHHHcCCCEEEEEEECCccccchhhhccccccccc
Confidence 37999999999999999888765 34567889999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc--hhhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
.++...+...++.+...++.++++.....+.. .......... .........+.... ....+..........
T Consensus 82 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 154 (306)
T d1rkda_ 82 TPVSVIKGESTGVALIFVNGEGENVIGIHAGA--NAALSPALVEAQRERIANASALLMQL-----ESPLESVMAAAKIAH 154 (306)
T ss_dssp TTEEEETTCCCEEEEEEECTTSCEEEEEECGG--GGGCCHHHHHTTHHHHHHCSEEEECS-----SSCHHHHHHHHHHHH
T ss_pred cccccccccccccceeeEeecCcceeeeeccc--hhhhhhhhhhhhHhhhhhheeeeecc-----cchhhhhhhHHHHhh
Confidence 99999999999999999998998887765332 2223332222 11222222322221 223445555566677
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCC
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD 291 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~ 291 (381)
..+.....++..... .+..+++++|++++|.+|+..+++....... .+.+.+.+.+.+.+++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~----------~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vivt~G~~ 224 (306)
T d1rkda_ 155 QNKTIVALNPAPARE----------LPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSR 224 (306)
T ss_dssp HTTCEEEECCCSCCC----------CCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGGG
T ss_pred hcccccccCchhhhh----------hHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHHHHhhcCCcEEEEecCCc
Confidence 778888777754332 2235688999999999999999998766542 333556679999999999999
Q ss_pred ceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHH
Q 016868 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 371 (381)
Q Consensus 292 G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~ 371 (381)
|++++.+++.+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+++|++.|+.+++|+++|
T Consensus 225 g~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~Ag~l~~l~~g~~-------~~~a~~~a~~~aa~~v~~~G~~~~~p~~~e 297 (306)
T d1rkda_ 225 GVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFAHAAAAIAVTRKGAQPSVPWREE 297 (306)
T ss_dssp CEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSSGGGCCCHHH
T ss_pred eEEEeecCceEEeCCccCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999988999999
Q ss_pred HHHHHhC
Q 016868 372 VLNAIHA 378 (381)
Q Consensus 372 v~~~l~~ 378 (381)
|+++|++
T Consensus 298 v~~~l~~ 304 (306)
T d1rkda_ 298 IDAFLDR 304 (306)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999986
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-41 Score=312.19 Aligned_cols=293 Identities=26% Similarity=0.369 Sum_probs=236.5
Q ss_pred CcEEEEccceeecccCCCCCCccC----CCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCC
Q 016868 61 PLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNG 136 (381)
Q Consensus 61 ~~vlviG~~~iD~~~~~~~~~~~~----~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~ 136 (381)
+.|+|||++++|++..++..|.+. +..+..++||++.|+|++|++||.+|.++|.+|+|.+|+.+.+.|++.||++
T Consensus 2 ~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~lg~~v~~is~vG~D~~g~~i~~~L~~~gi~~ 81 (308)
T d2fv7a1 2 AAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIST 81 (308)
T ss_dssp CSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTEEC
T ss_pred CEEEEEChhheEeEeecCCCCCCCceEeeceEEEecCCHHHHHHHHHHHCCCCEEEEEEeccccccccccchhccccccc
Confidence 579999999999998888776652 3456788999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccch--hhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 137 AGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 137 ~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
+++...+..++..+++.++.++++++..+.. ....+....+.. .......+..... ...++......+.++
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 154 (308)
T d2fv7a1 82 EFTYQTKDAATGTASIIVNNEGQNIIVIVAG--ANLLLNTEDLRAAANVISRAKVMVCQL-----EITPATSLEALTMAR 154 (308)
T ss_dssp TTEEEESSSCCEEEEEEECTTSCEEEEEECG--GGGGCCHHHHHHTHHHHHHCSEEEECS-----SSCHHHHHHHHHHHH
T ss_pred ccccccccccccceEEEEecCCceEEEeeec--chhhhchhhhhhhhhhcccceEEeecc-----ccchHHHHHHHHHhh
Confidence 9999998889999999999999998877633 232344333321 2222223332221 223456677888899
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCC
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD 291 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~ 291 (381)
+.+.++++|+......|.. ......+++..|..|.+........+.. .....+++.+++.++||+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vivT~G~~ 225 (308)
T d2fv7a1 155 RSGVKTLFNPAPAIADLDP---------QFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAE 225 (308)
T ss_dssp HTTCEEEECCCSCCTTCCT---------HHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred hcCceEEecccchhhhhhh---------hHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHHHHHhcCCCEEEEEeccc
Confidence 9999999999866554432 2344678899999988877766655443 344667788999999999999
Q ss_pred ceEEEeCC--ceEEEccccccccCCCCccHHHHHHHHHHH--HcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 016868 292 GCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQL--STDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367 (381)
Q Consensus 292 G~~~~~~~--~~~~~~~~~v~vvdttGAGDaF~ag~l~~l--~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~ 367 (381)
|++++.++ ..+++|+++++++||+||||+|+|||++++ .+|++ +++|+++|+++|++++++.|+++++|
T Consensus 226 G~~~~~~~~~~~~~~p~~~v~vvDttGAGDaF~ag~~~~l~~~~~~~-------~~~a~~~a~~~aa~~v~~~G~~~~~p 298 (308)
T d2fv7a1 226 GCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LEDMLNRSNFIAAVSVQAAGTQSSYP 298 (308)
T ss_dssp CEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHHHHHHHHHHHHHHHTSSSGGGGCC
T ss_pred ceeeecccccceeecccccccccCCCChhHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999864 578899999999999999999999999977 58888 99999999999999999999998899
Q ss_pred CHHHHHHHH
Q 016868 368 TREAVLNAI 376 (381)
Q Consensus 368 ~~~~v~~~l 376 (381)
+++||+.+|
T Consensus 299 ~~~ei~~~l 307 (308)
T d2fv7a1 299 YKKDLPLTL 307 (308)
T ss_dssp CGGGSCGGG
T ss_pred CHHHHHHhh
Confidence 999998765
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=3.4e-40 Score=305.51 Aligned_cols=290 Identities=23% Similarity=0.225 Sum_probs=231.2
Q ss_pred EEEEc-cceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 63 VVCFG-EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 63 vlviG-~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
|++++ +.++|++..+++.+.. .......++||++.|+|.+|++||.++.++|.+|+| +|+.+.+.|+++||++++
T Consensus 2 ~~~~~~np~vD~~~~vd~~~~g~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~vGdd-~~~~i~~~l~~~gi~~~~ 80 (313)
T d2f02a1 2 IVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAF 80 (313)
T ss_dssp EEEEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHHHHHHTTCCBCC
T ss_pred EEEEeCChHHcEEEEeCCccCCCEEEeCeeeecCCCHHHHHHHHHHHCCCCEEEEEEecCc-cHHHHHHHHHhhccCceE
Confidence 44444 4459999988877443 245778899999999999999999999999999976 789999999999999999
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHHHHH
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAAAKA 212 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (381)
+.+.++ |+.++.+++.++++.+... . ..+++++++ .+.+.+++++++++... .....+.+..+++.
T Consensus 81 i~~~~~--t~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~ 152 (313)
T d2f02a1 81 TSIKEE--TRDSIAILHEGNQTEILEA-G----PTVSPEEISNFLENFDQLIKQAEIVTISGSLA-KGLPSDFYQELVQK 152 (313)
T ss_dssp EEESSC--CEEEEEEEETTEEEEEEEC-C----CBCCHHHHHHHHHHHHHHHTTCSEEEEESCCC-BTSCTTHHHHHHHH
T ss_pred EEeecC--CceEEEEEeCCCceEEeec-c----ccCCHHHHHHHHHHhhhhhcccceEEEecccc-cccCHHHHHHHHHH
Confidence 877654 5556666665555444321 1 234554443 35688999999987532 33344677788999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCCh-----HHHHHHHHhcCCCEEEEE
Q 016868 213 AKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD-----DAVVYKLFHANLKLLLVT 287 (381)
Q Consensus 213 a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~-----~~~~~~l~~~g~~~vvvt 287 (381)
+++.++++++|+.. ...... ...+..+|++++|+.|+..+++....+. .++++++...|++.|+||
T Consensus 153 ~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~g~~~vivT 223 (313)
T d2f02a1 153 AHAQEVKVLLDTSG--------DSLRQV-LQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVIS 223 (313)
T ss_dssp HHHTTCEEEEECCT--------HHHHHH-HHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSEEEEE
T ss_pred HHhcCCceeecchH--------HHHHHH-hhhcccceEEEehhhhHHHhhccccccchhhHHHHHHHHHHhcCCceeEEe
Confidence 99999999999852 222222 2345679999999999999998754321 223345566899999999
Q ss_pred ecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 016868 288 EGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALP 367 (381)
Q Consensus 288 ~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~ 367 (381)
+|++|++++.+++.+++++++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++.|+ ..|
T Consensus 224 ~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGD~f~ag~i~~l~~g~~-------~~~al~~A~a~aa~~~~~~g~--~~~ 294 (313)
T d2f02a1 224 LGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAELLKWGMAAGMANAQERMT--GHV 294 (313)
T ss_dssp CGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSS--SCC
T ss_pred cccceEEEEeCCceEecccccCCCCCCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhCCCCC--CCC
Confidence 99999999999999999999999999999999999999999999999 999999999999999999997 468
Q ss_pred CHHHHHHHHhCC
Q 016868 368 TREAVLNAIHAP 379 (381)
Q Consensus 368 ~~~~v~~~l~~~ 379 (381)
+.++++++++++
T Consensus 295 ~~e~~~~~~~~~ 306 (313)
T d2f02a1 295 DVENVKKHLMNI 306 (313)
T ss_dssp CHHHHHHHHTTC
T ss_pred CHHHHHHHHhcC
Confidence 999999999864
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=3.5e-40 Score=304.43 Aligned_cols=284 Identities=21% Similarity=0.246 Sum_probs=229.0
Q ss_pred EEEEccceeecccCCCCCCcc---CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCCe
Q 016868 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAGM 139 (381)
Q Consensus 63 vlviG~~~iD~~~~~~~~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v 139 (381)
+.|-.+++||++..+++.+.. ........+||++.|+|.+|++||.++.++|.+|+| .|+++++.|++.||+++++
T Consensus 3 ~~~~~np~iD~~~~v~~~~~g~~~~~~~~~~~~GG~~~N~A~~l~~lG~~~~~ig~vG~D-~g~~i~~~L~~~gi~~~~v 81 (306)
T d2abqa1 3 YTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGGF-TGAYVRNALEKEEIGLSFI 81 (306)
T ss_dssp EEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEHH-HHHHHHHHHHHTTCEECCE
T ss_pred EEEeCchhHeEEEEeCCcCCCCeEEcCeeeecCCCHHHHHHHHHHHcCCCEEEEEEecCc-cHHHHHHHHHhcccccccc
Confidence 455668899999999887654 244567789999999999999999999999999999 6999999999999999999
Q ss_pred eecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc-----hhhcCCccEEEEccccccCchhHHHHHHHHHHHH
Q 016868 140 RFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAK 214 (381)
Q Consensus 140 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 214 (381)
...++ |.+++...+.+ +.... ........+++. ...+..++++++++... .....+....+++.++
T Consensus 82 ~~~~~--t~~~i~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ 152 (306)
T d2abqa1 82 EVEGD--TRINVKIKGKQ--ETELN----GTAPLIKKEHVQALLEQLTELEKGDVLVLAGSVP-QAMPQTIYRSMTQIAK 152 (306)
T ss_dssp EESSC--CEEEEEEESSS--CEEEB----CCCCCCCHHHHHHHHHHHTTCCTTCEEEEESCCC-TTSCTTHHHHHHHHHH
T ss_pred eeeee--eEEEEEEeccc--ccccc----cccccCCHHHhhhhhhhHhhhccCCEEEEcCccc-cchHHHHHHHHHHHHH
Confidence 87654 55555544322 22222 112223333332 24567789998877632 3344466778889999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCC
Q 016868 215 DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD 291 (381)
Q Consensus 215 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~ 291 (381)
+.+.++++|+. . +......+..+|++++|+.|+..+++....+.+ ++++.+.+.+++.++||+|++
T Consensus 153 ~~~~~~~~d~~--------~---~~~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~ 221 (306)
T d2abqa1 153 ERGAFVAVDTS--------G---EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGD 221 (306)
T ss_dssp TTTCEEEEECC--------H---HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred HcCCceeccch--------h---hHHHHHhhhcceeecccccccccccccccccccchhhcccccccccccceeeeeccc
Confidence 99999999985 1 233345678899999999999999998765543 455778889999999999999
Q ss_pred ceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHH
Q 016868 292 GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREA 371 (381)
Q Consensus 292 G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~ 371 (381)
|++++++++.+++|+++++++||+||||+|+|||+++|++|++ +++|+++|+++|++++++.|. |++++
T Consensus 222 G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~a~aa~~~~~~G~----~~~~~ 290 (306)
T d2abqa1 222 GALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAVAAGSATAFSDGF----CTREE 290 (306)
T ss_dssp CEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHSSSC----CCHHH
T ss_pred CcccccccccccccccCCccCCCCcHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCC----CCHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999984 68899
Q ss_pred HHHHHhC
Q 016868 372 VLNAIHA 378 (381)
Q Consensus 372 v~~~l~~ 378 (381)
|++++++
T Consensus 291 v~~~~~~ 297 (306)
T d2abqa1 291 VERLQQQ 297 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888765
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-39 Score=301.51 Aligned_cols=293 Identities=15% Similarity=0.141 Sum_probs=227.0
Q ss_pred EEEEc-cceeecccCCCCCCcc------CCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCC
Q 016868 63 VVCFG-EMLIDFVPTVSGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVN 135 (381)
Q Consensus 63 vlviG-~~~iD~~~~~~~~~~~------~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~ 135 (381)
|+.+| +.++|++..+++++.. +.......+||++.|+|++|++||.++.+++.+|+| +|+++.+.|++.|++
T Consensus 2 i~t~~lnp~iD~~~~v~~l~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~g~~~~~~L~~~~~~ 80 (319)
T d2ajra1 2 VLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKISKL 80 (319)
T ss_dssp EEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHHCTT
T ss_pred EEEEeCChHHcEEEEECCccCCCceeeeecceeeECCCCHHHHHHHHHHHCCCCEEEEEEecCc-cHHHHHHHHHHhCCC
Confidence 56667 5779999888876443 233466789999999999999999999999999965 899999999998877
Q ss_pred CCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc------hhhcCCccEEEEccccccCchhHHHHHHH
Q 016868 136 GAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGSISLITEPCKSAHIAA 209 (381)
Q Consensus 136 ~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (381)
++...+....+|++++.+++.++++.+.+. .++. .++..+++ ...+.++++++++|. +....+.+.+..+
T Consensus 81 i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~sGs-~~~~~~~~~~~~l 156 (319)
T d2ajra1 81 ITTNFVYVEGETRENIEIIDEKNKTITAIN-FPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGS-IPPGVNEGICNEL 156 (319)
T ss_dssp EEEEEEEESSCCEEEEEEEETTTTEEEEEE-CCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESC-CCTTSCTTHHHHH
T ss_pred CCceeEecCCCCceEEEEEECCCCeEEEEe-cCCC--cCCHHHHHHHHHHHHhhcccccEEEEecC-CcccccHHHHHHH
Confidence 665544334578888888887777665553 2222 24443332 256889999998763 2222345677899
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecC-HHHHhhccCCCCCChHHH---HHHHHhcCCCEEE
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKIS-EEEISFLTQGEDPYDDAV---VYKLFHANLKLLL 285 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N-~~E~~~l~~~~~~~~~~~---~~~l~~~g~~~vv 285 (381)
++.++++++++++|+. + .....+.+....++++++| ++|++.+++....+.++. ++.|.+.+ +.+|
T Consensus 157 ~~~a~~~~~~v~~D~s--------~-~~~~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~~~~~l~~~~-~~vv 226 (319)
T d2ajra1 157 VRLARERGVFVFVEQT--------P-RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKS-QVSV 226 (319)
T ss_dssp HHHHHHTTCEEEEECC--------H-HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHHS-SEEE
T ss_pred HHHHHhcCCcccccch--------h-hHHHHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHHHHhhhhhhc-ceee
Confidence 9999999999999974 2 2334444556778999999 578999998876665554 46677776 5678
Q ss_pred EEecCCceEEEeCCceE-EEccccccccCCCCccHHHHHHHHHHHH-cCCccccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 286 VTEGPDGCRYYTKDFSG-RVQGLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 286 vt~G~~G~~~~~~~~~~-~~~~~~v~vvdttGAGDaF~ag~l~~l~-~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
||+|.+|++++.+++.+ +.++++++++|||||||+|+|||+++++ +|++ +++|+++|+++|+.++++.|.
T Consensus 227 vt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~i~~~l~~g~~-------~~~a~~~a~a~aa~~~~~~g~- 298 (319)
T d2ajra1 227 VSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN-------FLEMAKFGFASALAATRRKEK- 298 (319)
T ss_dssp EEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-------HHHHHHHHHHHHHHHTTSSSC-
T ss_pred eecccceeeeeccCCceEecccccCCCCCCCChHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCCCCC-
Confidence 99999999998877554 4466678999999999999999999976 5999 999999999999999999996
Q ss_pred CCCCCHHHHHHHHhCC
Q 016868 364 PALPTREAVLNAIHAP 379 (381)
Q Consensus 364 ~~~~~~~~v~~~l~~~ 379 (381)
.+|++++++++++++
T Consensus 299 -~~~~~~~~~~~~~~~ 313 (319)
T d2ajra1 299 -YMPDLEAIKKEYDHF 313 (319)
T ss_dssp -CCCCHHHHHTTGGGE
T ss_pred -CCCCHHHHHHHHhcC
Confidence 569999999998764
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=3.3e-39 Score=303.08 Aligned_cols=289 Identities=22% Similarity=0.304 Sum_probs=216.2
Q ss_pred CCcEEEEccceeecccCCCC-------CCcc----------------CCCCccccCCChHHHHHHHHHHc---CCceEEE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-------LSLA----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-------~~~~----------------~~~~~~~~~GG~~~NvA~~la~L---G~~v~li 113 (381)
+|+|+|||++++|++..++. .+.. .....+..+||++.|+|++|++| |.++.|+
T Consensus 3 p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~~i 82 (350)
T d2absa1 3 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 82 (350)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHHhhhccCceEecCcHHHHHHHHHHHhccCCccEEEE
Confidence 47999999999999987652 1110 11123456899999999999999 7889999
Q ss_pred eecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEc
Q 016868 114 GKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYG 193 (381)
Q Consensus 114 ~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ 193 (381)
|.||+|.+|+++++.|+++||+++++ +.++.+|+.++++++ ++++++..+.. ....+...+.....+...++++..
T Consensus 83 g~vG~D~~G~~i~~~l~~~gv~~~~~-~~~~~~t~~~~v~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
T d2absa1 83 GAIGDDPRGQVLKELCDKEGLATRFM-VAPGQSTGVCAVLIN-EKERTLCTHLG--ACGSFRLPEDWTTFASGALIFYAT 158 (350)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEE-ECTTCCCEEEEEEEE-TTEEEEEEECG--GGGGCCCCTTHHHHTTTCCEEEEE
T ss_pred ecCCCChhhHhHHHHHHhcCCccccc-ccccccceEEEEEee-ccCcceEeeec--ccccccccccccccccccccccce
Confidence 99999999999999999999999876 456778999999887 46666666533 333344445555677888888888
Q ss_pred cccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCC-----
Q 016868 194 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY----- 268 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~----- 268 (381)
++.+. .........+...++..+..+.+|+.... .....+..+..+++++|++++|++|++.|++.....
T Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~~ 233 (350)
T d2absa1 159 AYTLT-ATPKNALEVAGYAHGIPNAIFTLNLSAPF----CVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKT 233 (350)
T ss_dssp GGGGT-TCHHHHHHHHHHHHTSTTCEEEEECCCHH----HHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-----
T ss_pred eeeec-cccchhHHHHHHhhhhccceEEEecchhh----hhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHHH
Confidence 76443 33445555566667778888999875211 122345666778899999999999999987643211
Q ss_pred ------hHHHH------HHHHh-----cCCCEEEEEecCCceEEEeCCc-----eEEE--ccccc-cccCCCCccHHHHH
Q 016868 269 ------DDAVV------YKLFH-----ANLKLLLVTEGPDGCRYYTKDF-----SGRV--QGLKV-EAVDATGAGDAFVA 323 (381)
Q Consensus 269 ------~~~~~------~~l~~-----~g~~~vvvt~G~~G~~~~~~~~-----~~~~--~~~~v-~vvdttGAGDaF~a 323 (381)
.++.. .++.. .+++.+|||+|++|+++++++. ..++ |+.++ ++||||||||+|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~a 313 (350)
T d2absa1 234 ALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVG 313 (350)
T ss_dssp -----CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHH
T ss_pred HhhhcchhhHHHHHHHHHHHHHhhhhccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHHH
Confidence 11111 11211 4678999999999999988652 2333 34333 68999999999999
Q ss_pred HHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 016868 324 GILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 364 (381)
Q Consensus 324 g~l~~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~ 364 (381)
||+++|++|++ +++|+++|+++|+.+|++.|++-
T Consensus 314 g~l~~ll~g~~-------~~~al~~a~~~Aa~~v~~~Ga~l 347 (350)
T d2absa1 314 GFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFSL 347 (350)
T ss_dssp HHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHHHHHCCCC-------HHHHHHHHHHHHHHHhcccCCCC
Confidence 99999999999 99999999999999999999864
|
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-39 Score=304.81 Aligned_cols=288 Identities=20% Similarity=0.273 Sum_probs=222.5
Q ss_pred CCcEEEEccceeecccCCCC-------CCcc-----------------CCCCccccCCChHHHHHHH----HHHcCCceE
Q 016868 60 SPLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVG----IARLGGSSA 111 (381)
Q Consensus 60 ~~~vlviG~~~iD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~NvA~~----la~LG~~v~ 111 (381)
+..|+|||++++|++..++. .+.. +...+...+||++.|+|.+ +++||.++.
T Consensus 3 ~~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~~~ 82 (342)
T d1bx4a_ 3 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 82 (342)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred CCEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCceEE
Confidence 35799999999999877652 1110 1234567799999997776 678999999
Q ss_pred EEeecCCChHHHHHHHHHHHCCCCCCCeeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccc----hhhcCCc
Q 016868 112 FIGKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLITKA 187 (381)
Q Consensus 112 li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~----~~~i~~~ 187 (381)
|+|.||+|.+|+++++.|+++||+++++...+. +|+.++++++.++++.+..+. ........+... ...+..+
T Consensus 83 ~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~-~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 159 (342)
T d1bx4a_ 83 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQ-PTGTCAACITGDNRSLIANLA--AANCYKKEKHLDLEKNWMLVEKA 159 (342)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSS-CCCEEEEEEETTEEEEEEECG--GGGGCCGGGTTTSHHHHHHHHHC
T ss_pred EEeecCCChhhhhhhhhhhhhcccceeeeeecc-cceEEEEEecCCccceeeecc--ccccccchhhhhhhhhHHHHhhc
Confidence 999999999999999999999999999887654 777777778888887776643 233222322221 2456788
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCC
Q 016868 188 KIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 267 (381)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~ 267 (381)
+++++.++.. ....+....+++.+++.+..+.+|+.. |...+..+..+..+++++|++++|++|++.|++....
T Consensus 160 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~~ 233 (342)
T d1bx4a_ 160 RVCYIAGFFL--TVSPESVLKVAHHASENNRIFTLNLSA----PFISQFYKESLMKVMPYVDILFGNETEAATFAREQGF 233 (342)
T ss_dssp SEEEEEGGGG--GTCHHHHHHHHHHHHHTTCEEEEECCS----HHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTC
T ss_pred ccceeccccc--chhHHHHHHHHHHhhhccceeeccccc----ccchhccccchhhhhccccEEeecHHHHHHhhCcCCc
Confidence 9999887643 334567777888899999999998742 1112334567778899999999999999999876432
Q ss_pred ---ChHHHHHHHH------hcCCCEEEEEecCCceEEEeCCceEEEccc---cccccCCCCccHHHHHHHHHHHHcCCcc
Q 016868 268 ---YDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSL 335 (381)
Q Consensus 268 ---~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~---~v~vvdttGAGDaF~ag~l~~l~~g~~~ 335 (381)
+.+++.+.+. ..+.+.+++|+|++|++++.+++..+++++ .+++||||||||+|+|||+++|++|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~- 312 (342)
T d1bx4a_ 234 ETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKP- 312 (342)
T ss_dssp CCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCC-
T ss_pred ccchhhhhHHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCC-
Confidence 3344443332 356778999999999999998876666544 357999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhcCCC
Q 016868 336 LQKEDQLRDALRFANACGALTVMERGAI 363 (381)
Q Consensus 336 ~~~~~~l~~al~~A~~~Aa~~~~~~G~~ 363 (381)
+++|+++|+++|+++|++.|++
T Consensus 313 ------~~~a~~~a~~~Aa~~v~~~Ga~ 334 (342)
T d1bx4a_ 313 ------LTECIRAGHYAASIIIRRTGCT 334 (342)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSSC
T ss_pred ------HHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999985
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.4e-33 Score=255.55 Aligned_cols=277 Identities=17% Similarity=0.129 Sum_probs=199.2
Q ss_pred CCCcEEEEccceeecccCCCCCCccCCCCccccCCChHHHHHHHHHHcCCceEEEeecCCChHHHHHHHHHHHCCCCCCC
Q 016868 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKVGADEFGYMLADILKENNVNGAG 138 (381)
Q Consensus 59 ~~~~vlviG~~~iD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~ 138 (381)
+..+|+++|++++|++..... ....+||.+.|+|.++++||.++.++|.+|+|..|. .+.|+++||++++
T Consensus 5 ~~~~i~~vg~~~~d~~~~~~~--------~~~~~GG~~~n~a~~~~~lG~~~~~i~~vG~D~~~~--~~~l~~~gi~~~~ 74 (288)
T d1vk4a_ 5 HHHMITFIGHVSKDVNVVDGK--------REIAYGGGVVMGAITSSLLGVKTKVITKCTREDVSK--FSFLRDNGVEVVF 74 (288)
T ss_dssp CCSEEEEECCCEEEEEEETTE--------EEEEEECHHHHHHHHHHHTTCEEEEEEEECTTTGGG--GTTTGGGTCEEEE
T ss_pred CCceEEEECCceeeEEecCCc--------EEEecCCHHHHHHHHHHHcCCCEEEEEEeCCChHHH--HHHHHHcCCcEEe
Confidence 345799999999998775332 356799999999999999999999999999998885 4889999999997
Q ss_pred eeecCCCCceEEEEEecCCCCceEEEecCCCccccCChhccchhhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCC
Q 016868 139 MRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 218 (381)
Q Consensus 139 v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~ 218 (381)
+.. +..|....++.+...++...... ....+..+++. ..+++++++.++.. .+.+ .++++.+++.+.
T Consensus 75 i~~--~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~ 141 (288)
T d1vk4a_ 75 LKS--PRTTSIENRYGSDPDTRESFLIS---AADPFTESDLA---FIEGEAVHINPLWY-GEFP----EDLIPVLRRKVM 141 (288)
T ss_dssp EEC--SSCEEEEEEC-----CCEEEEEE---CCCCCCGGGGG---GCCSSEEEECCSST-TSSC----GGGHHHHHHHCS
T ss_pred ecc--CCcceEEEEEecCCCeeEEEeeh---hhhcCChhhhh---hhccceEEEchhhh-ccch----HHHHHHHHHhCc
Confidence 753 33455555544444445544432 22234444432 23577888776532 2222 244566778889
Q ss_pred eEEEeCCCCC----CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccCCCCCChHHHHHHHHhcCCCEEEEEecCCceE
Q 016868 219 VLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCR 294 (381)
Q Consensus 219 ~v~~D~~~~~----~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 294 (381)
++++|++... ..+. .......+.++++.+|++++|++|++.+++.... ++.++.+.+.+.. ++++.|..|+.
T Consensus 142 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~~~~~--~~~~~~~~~~~~~-~v~~~g~~~~~ 217 (288)
T d1vk4a_ 142 FLSADAQGFVRVPENEKL-VYRDWEMKEKYLKYLDLFKVDSREAETLTGTNDL--RESCRIIRSFGAK-IILATHASGVI 217 (288)
T ss_dssp EEEEETHHHHEEEETTEE-EECCCTTHHHHGGGCSEEEEEHHHHHHHHSCSCH--HHHHHHHHHTTCS-SEEEEETTEEE
T ss_pred ceeecccccccccccccc-ccccHHHHHHHHHhCCcccCCHHHHHHHhhhhhH--HHHHhhhhcccce-eeeccccceee
Confidence 9999984210 0000 0011234567899999999999999999987653 5566666666665 56666767766
Q ss_pred EEeCCceEEEccccccccCCCCccHHHHHHHHHHHH-cCCccccchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHH
Q 016868 295 YYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 373 (381)
Q Consensus 295 ~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~-~g~~~~~~~~~l~~al~~A~~~Aa~~~~~~G~~~~~~~~~~v~ 373 (381)
++ .+..++.+.++++++|||||||+|+|||+++++ +|++ +++|+++|+++|+.++++.|+ +++++++
T Consensus 218 ~~-~~~~~~~~~~~~~vvDttGAGDsF~ag~i~~~l~~g~~-------~~~a~~~A~~~Aa~~v~~~Gp----~~~~~~~ 285 (288)
T d1vk4a_ 218 VF-DGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKMRHPGP----LRREDLE 285 (288)
T ss_dssp EE-SSSEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHTTSSSS----CCGGGGG
T ss_pred cc-ccccccccCCCCccCCCCCHHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHhCcCCC----CCHHHHH
Confidence 54 566788888899999999999999999999976 7889 999999999999999999994 4677776
Q ss_pred H
Q 016868 374 N 374 (381)
Q Consensus 374 ~ 374 (381)
+
T Consensus 286 ~ 286 (288)
T d1vk4a_ 286 A 286 (288)
T ss_dssp G
T ss_pred h
Confidence 5
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=3e-16 Score=141.33 Aligned_cols=163 Identities=15% Similarity=0.089 Sum_probs=121.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
+.|.+..+.+ .+....+.+.++++..|. .+.++++||.... ......+......+++++.+|+++||..|++.
T Consensus 75 ~~daI~tG~l--~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~ 152 (288)
T d1vi9a_ 75 TCDAVLSGYL--GSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEI 152 (288)
T ss_dssp GCCEEEECCC--SCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCEEEEecc--CChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHH
Confidence 5677766643 344455666777777654 4688999995321 11223344556667899999999999999999
Q ss_pred ccCCCCCChH---HHHHHHHhcCCCEEEEEecCCc--------eEEEeCCceEEE--ccccccccCCCCccHHHHHHHHH
Q 016868 261 LTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG--------CRYYTKDFSGRV--QGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 261 l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~G--------~~~~~~~~~~~~--~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
|+|.+..+.+ +++++|++.|++.|+||.+..| .++++.++.+++ |..+....|++|+||+|+|+|++
T Consensus 153 L~g~~i~~~~~~~~aa~~L~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GtGD~fsa~l~a 232 (288)
T d1vi9a_ 153 LCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLV 232 (288)
T ss_dssp HHTSCCCSHHHHHHHHHHHHHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECCCCTTCCCSCHHHHHHHHHHH
T ss_pred hhccccchhHHHHHHHHHHHhcCCCEEEEEecCccccccCceeEEEEeCCceEEecccccccCCCCCCChhHHHHHHHHH
Confidence 9998876654 4557888899999999977654 255666655555 44445678999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANACGALTV 357 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~Aa~~~ 357 (381)
+|++|++ +++|+++|.+.-...+
T Consensus 233 ~l~~G~~-------l~~A~~~A~~~v~~~l 255 (288)
T d1vi9a_ 233 KLLQGAT-------LQEALEHVTAAVYEIM 255 (288)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHH
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 9999999 9999999987754444
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.52 E-value=2.8e-13 Score=119.74 Aligned_cols=162 Identities=17% Similarity=0.073 Sum_probs=118.8
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCC---CCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.|.+.++.+ .+....+.+.++++. ....++++||..... .....+.....++.+++.+|+++||..|++.|+
T Consensus 70 ~~daIkiG~l--~s~~~~~~i~~~l~~--~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L~ 145 (258)
T d1ub0a_ 70 PLHAAKTGAL--GDAAIVEAVAEAVRR--FGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALL 145 (258)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHH--TTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHH
T ss_pred CccEEEEecc--ccchHHHHHHHHHHH--hccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhhc
Confidence 5678877643 333333444444432 234678899853221 112234556677789999999999999999999
Q ss_pred CCCCCChH---HHHHHHHhcCCCEEEEEecCC----ce-EEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCc
Q 016868 263 QGEDPYDD---AVVYKLFHANLKLLLVTEGPD----GC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFS 334 (381)
Q Consensus 263 ~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~----G~-~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~ 334 (381)
|....+.+ ++++.|++.|++.|+||.|.. .. +++++++.+++..+++...++.|+||+|+++|++.|++|.+
T Consensus 146 g~~~~~~~d~~~aa~~L~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtGd~~asaia~~La~G~~ 225 (258)
T d1ub0a_ 146 GRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRP 225 (258)
T ss_dssp CSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCeEEEeccccccccccceeccCCeEEecccceecCCCCCChHHHHHHHHHHHHHcCCC
Confidence 98876654 456788899999999998643 22 44566777788888777889999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhh
Q 016868 335 LLQKEDQLRDALRFANACGALTVM 358 (381)
Q Consensus 335 ~~~~~~~l~~al~~A~~~Aa~~~~ 358 (381)
+++|++.|.......+.
T Consensus 226 -------l~~Av~~A~~~v~~~i~ 242 (258)
T d1ub0a_ 226 -------LAEAVAEAKAYLTRALK 242 (258)
T ss_dssp -------HHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHH
Confidence 99999999988766654
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.48 E-value=4.7e-13 Score=121.15 Aligned_cols=161 Identities=17% Similarity=0.103 Sum_probs=109.4
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHHH--CCCeEEEeCCCCC------CCCCCHHHHHHHHHHHhhhCCEEecC
Q 016868 183 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL------PLWPSADKAREGILSIWETADIIKIS 254 (381)
Q Consensus 183 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~--~g~~v~~D~~~~~------~~~~~~~~~~~~~~~~l~~~dvl~~N 254 (381)
.+...|.+..+.+ .+....+.+.++++..+. .+.++++||.... ..+.+.+......+.+++.+|+++||
T Consensus 70 ~l~~~daI~tG~l--~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp~adiITPN 147 (309)
T d1lhpa_ 70 HVNQYDYVLTGYT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIITPN 147 (309)
T ss_dssp TCCCCSEEEECCC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGGGCSEECCC
T ss_pred cccccCeeeeccc--CCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcCcCcEEecc
Confidence 3446788866643 344444556666666543 4688999997532 13333333333444599999999999
Q ss_pred HHHHhhccCCCCCChH---HHHHHHHhcCCCEEEEEecCC------ceEEEeCC------------ceEEEccccccccC
Q 016868 255 EEEISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPD------GCRYYTKD------------FSGRVQGLKVEAVD 313 (381)
Q Consensus 255 ~~E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvt~G~~------G~~~~~~~------------~~~~~~~~~v~vvd 313 (381)
..|++.|+|.+..+.+ ++++.|++.|+++|+||-|.. +..+.... +.+.++.++++ .+
T Consensus 148 ~~Ea~~Ltg~~~~~~~~~~~aa~~L~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~ 226 (309)
T d1lhpa_ 148 QFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHKVD-AV 226 (309)
T ss_dssp HHHHHHHHTCCCCSHHHHHHHHHHHHHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEEECCS-SC
T ss_pred HHHHhHHhccccCCHHHHHHHHHHHHhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEeecccC-CC
Confidence 9999999998876554 466788889999999997642 22221111 11233444443 46
Q ss_pred CCCccHHHHHHHHHHHHcCC-ccccchHHHHHHHHHHHHHH
Q 016868 314 ATGAGDAFVAGILSQLSTDF-SLLQKEDQLRDALRFANACG 353 (381)
Q Consensus 314 ttGAGDaF~ag~l~~l~~g~-~~~~~~~~l~~al~~A~~~A 353 (381)
++|+||+|+|+|++.+++|. + +++|++.|...-
T Consensus 227 ~~GtGD~fsa~l~a~l~~g~~~-------L~~A~~~A~~~v 260 (309)
T d1lhpa_ 227 FVGTGDLFAAMLLAWTHKHPNN-------LKVACEKTVSAM 260 (309)
T ss_dssp CSSHHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHH
Confidence 79999999999999999875 7 999999987763
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.45 E-value=1.8e-12 Score=114.77 Aligned_cols=163 Identities=12% Similarity=0.059 Sum_probs=111.7
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCC---CCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 186 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~---~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
+.+.+.++.+ .+...-+.+.++++.. ...++++||..... .....+......+.+++.+|+++||..|+..|+
T Consensus 72 ~~~aIkiG~l--~s~~~i~~v~~~l~~~--~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~Ll 147 (266)
T d1jxha_ 72 RIDTTKIGML--AETDIVEAVAERLQRH--HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALL 147 (266)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHT--TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHH
T ss_pred cCceEEEccc--chHHHHHHHHHHHHhc--cCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHHh
Confidence 4577776643 2333333444444322 34678899853221 122334445555679999999999999999888
Q ss_pred CCCCCCh----HHHHHHHHhcCCCEEEEEecCCc-----eEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCC
Q 016868 263 QGEDPYD----DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 333 (381)
Q Consensus 263 ~~~~~~~----~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~ 333 (381)
+...... .++++.+.+.|++.|++|-|... .++++.++.+++..+++...++.|+||+|++++++.|++|+
T Consensus 148 ~~~~~~~~~~~~~aa~~l~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hGTGc~lasaiaa~La~G~ 227 (266)
T d1jxha_ 148 DAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHR 227 (266)
T ss_dssp TCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGSS
T ss_pred cCCcccChHHHHHHHHHHHhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccccCCCCCCchHHHHHHHHHHHHcCC
Confidence 7554322 34568888999999999976532 35666667777777777778889999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhh
Q 016868 334 SLLQKEDQLRDALRFANACGALTVME 359 (381)
Q Consensus 334 ~~~~~~~~l~~al~~A~~~Aa~~~~~ 359 (381)
+ +++|++.|.......+.+
T Consensus 228 ~-------l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 228 S-------WGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp S-------HHHHHHHHHHHHHHHHTT
T ss_pred C-------HHHHHHHHHHHHHHHHHh
Confidence 9 999999999888777653
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.80 E-value=9.5e-08 Score=83.28 Aligned_cols=157 Identities=15% Similarity=0.009 Sum_probs=100.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhh--hCCEEecCHHHHh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 259 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~--~~dvl~~N~~E~~ 259 (381)
+..+.++.+.++-- .+++...+.+...++.+++.++|+++||..-.. .....+....++. +.++|++|..|+.
T Consensus 54 e~~~~a~alviN~G-tl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvga----s~~R~~~~~~ll~~~~~tVI~gN~~Ei~ 128 (269)
T d1ekqa_ 54 DMAKIAGALVLNIG-TLSKESVEAMIIAGKSANEHGVPVILDPVGAGA----TPFRTESARDIIREVRLAAIRGNAAEIA 128 (269)
T ss_dssp HHHHHSSEEEEECT-TCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT----BHHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhccceEEecC-CCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCC----chhHHHHHHHHHHhCCCceEcCCHHHHH
Confidence 45566777766532 334455677778889999999999999953221 1233455555664 4699999999999
Q ss_pred hccCCCCC---------Ch---HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHH
Q 016868 260 FLTQGEDP---------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 327 (381)
Q Consensus 260 ~l~~~~~~---------~~---~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~ 327 (381)
.|.|.... .. .++++.+.++.-..|++| |+ .-++.+++..+.+..-....-..+|.||++.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~d~~~~A~~la~~~~~vVvlk-G~-~D~I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa 206 (269)
T d1ekqa_ 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GE-VDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (269)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SS-SEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCccCCcCCcCCcccHHHHHHHHHHHHHhcCCEEEec-CC-ceEEEeCCeeEEecCCChhhccCCcchHHHHHHHHH
Confidence 99985421 11 234566665444455554 43 345566566665554332333458999999998888
Q ss_pred HHHcCCccccchHHHHHHHHHHHHH
Q 016868 328 QLSTDFSLLQKEDQLRDALRFANAC 352 (381)
Q Consensus 328 ~l~~g~~~~~~~~~l~~al~~A~~~ 352 (381)
.+..+.+ +.+|+..|...
T Consensus 207 ~la~~~~-------~~~A~~~A~~~ 224 (269)
T d1ekqa_ 207 FCAVEEN-------PLFAAIAAISS 224 (269)
T ss_dssp HHTTCSS-------HHHHHHHHHHH
T ss_pred HHhCCCC-------HHHHHHHHHHH
Confidence 8888888 77777665544
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.48 E-value=1.3e-06 Score=75.80 Aligned_cols=145 Identities=16% Similarity=0.024 Sum_probs=87.7
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHh-hhCCEEecCHHHHhh
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 260 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dvl~~N~~E~~~ 260 (381)
+..+.++.+.++--. .++...+.+..+++.+++.++|+++||..-.. +. ...+...+++ ..++++++|..|+..
T Consensus 52 e~~~~a~al~iN~Gt-l~~~~~~~m~~a~~~A~~~~~PvVLDPVgvga---s~-~R~~~~~~ll~~~~~vItgN~~Ei~~ 126 (264)
T d1v8aa_ 52 EMIRLADAVVINIGT-LDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (264)
T ss_dssp HHHHHCSEEEEECTT-CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHhcCceEeeCCC-CCHHHHHHHHHHHHHHHHcCCCEEEcCcccCc---ch-hHHHHHHHHhccCCcEEcCCHHHHHH
Confidence 444556666654322 34445677778888999999999999954322 11 1223333333 368999999999999
Q ss_pred ccCCCCC---------Ch---HHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHH
Q 016868 261 LTQGEDP---------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 328 (381)
Q Consensus 261 l~~~~~~---------~~---~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~ 328 (381)
|.|.... .. .++++.+.++.-..|++ .|+. -++.++++.+.++.-....-..+|.||++.+.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~d~~~~a~~lA~~~~~vVvl-kG~~-D~I~dg~~~~~~~~G~~~m~~itGtGc~Ls~~iaa~ 204 (264)
T d1v8aa_ 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAV-TGAV-DYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (264)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEE-ESSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCcccCCCCCCcccccHHHHHHHHHHHHHHhCCEEEe-cCCe-eEEEcCCEEEEeCCCCchhccCCcccHHHHHHHHHH
Confidence 9874311 11 23445665544334444 5644 455666666666654433444689999977655555
Q ss_pred HHcCC
Q 016868 329 LSTDF 333 (381)
Q Consensus 329 l~~g~ 333 (381)
+..+.
T Consensus 205 la~~~ 209 (264)
T d1v8aa_ 205 VAVTE 209 (264)
T ss_dssp HTTSC
T ss_pred HhcCC
Confidence 55553
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.38 E-value=2.7e-06 Score=74.40 Aligned_cols=170 Identities=15% Similarity=0.003 Sum_probs=106.8
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 184 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 184 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
.++.|.+.++.-.-.+ +....+++.+.+.++++++|...-..+. ....+...|++||..|+..|++
T Consensus 92 ~~~~~~~~iGpGlg~~----~~~~~~~~~l~~~~~p~VlDAdal~~~~----------~~~~~~~~IiTPH~gE~~rL~g 157 (275)
T d1kyha_ 92 EETYRAIAIGPGLPQT----ESVQQAVDHVLTADCPVILDAGALAKRT----------YPKREGPVILTPHPGEFFRMTG 157 (275)
T ss_dssp CSCCSEEEECTTCCSS----HHHHHHHHHHTTSSSCEEECGGGCCSCC----------CCCCSSCEEECCCHHHHHHHHC
T ss_pred hhccceEEEeccccch----HHHHHHHHHHhhccCceeehhhhhhhhh----------cccccCceEecccHHHHHHhcC
Confidence 4567888776532222 2334556667778899999985321110 0113456799999999999998
Q ss_pred CCCC----ChHHHHHHHHhcCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCccccch
Q 016868 264 GEDP----YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKE 339 (381)
Q Consensus 264 ~~~~----~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~~~ 339 (381)
.... +..++++++.+..- .++|-.|... ++.+.++..++.........+.|.||+++|.+...+.+|.+
T Consensus 158 ~~~~~~~~~~~~~a~~~~~~~~-~~vllKG~~t-~I~~~~g~~~~~~~g~~~lat~GsGDvLaGiIa~~lAq~~~----- 230 (275)
T d1kyha_ 158 VPVNELQKKRAEYAKEWAAQLQ-TVIVLKGNQT-VIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED----- 230 (275)
T ss_dssp CCHHHHTTSHHHHHHHHHHHHT-SEEEECSTTC-EEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS-----
T ss_pred cccchhhccHHHHHHHHHHHhC-CeEEeccCcc-eEEcCCCceeecCCCCccccCCccccHHHHHHHHHHHcCCC-----
Confidence 7643 22345566655322 3566666554 44544444555555556678999999999999999999999
Q ss_pred HHHHHHHHHHHH---HHH-HHhhhcCCCCCCCCHHHHHHHHhC
Q 016868 340 DQLRDALRFANA---CGA-LTVMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 340 ~~l~~al~~A~~---~Aa-~~~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+.+|+..|+. .|+ ....+.|.. ++ ..++|-+.+.+
T Consensus 231 --~~~Aa~~a~~lh~~aa~~~~~~~~~~-~~-~asdi~~~ip~ 269 (275)
T d1kyha_ 231 --PKHAVLNAVYLHGACAELWTDEHSAH-TL-LAHELSDILPR 269 (275)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHSCGG-GC-CTHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCC-CC-CHHHHHHHHHH
Confidence 9999999853 233 334444432 33 44566555543
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.35 E-value=4.4e-06 Score=77.40 Aligned_cols=165 Identities=13% Similarity=0.072 Sum_probs=93.3
Q ss_pred ccCCChHHHHHHHHHHcCCc-eEEEeecCCChHHHHHHHHHHHCCCCCCCe------------eecCCCCceEEEEEecC
Q 016868 90 KAPGGAPANVAVGIARLGGS-SAFIGKVGADEFGYMLADILKENNVNGAGM------------RFDPGARTALAFVTLRS 156 (381)
Q Consensus 90 ~~~GG~~~NvA~~la~LG~~-v~li~~vG~D~~g~~i~~~l~~~gi~~~~v------------~~~~~~~t~~~~~~~~~ 156 (381)
.+.||.+.-+|..|+++|.+ |.+.+.++. +...+.|+ .++-.-.+ ...+..+.-+-+++-.+
T Consensus 92 ~r~GGnA~imAn~la~~g~~~vi~~~p~~s----k~~~~lf~-~~i~~P~v~~g~~~~~~p~~a~~~~d~~~iHlIlEy~ 166 (450)
T d1u2xa_ 92 ERLGGQAGIIANTLAGLKIRKVIAYTPFLP----KRLAELFK-KGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEFR 166 (450)
T ss_dssp EEEESHHHHHHHHHHHTTCSEEEEECSCCC----HHHHTTSC-TTEEEEEEETTEEEEEEGGGCCCTTCCCCEEEEEEEC
T ss_pred cccCChHHHHHHHHHhcCCceEEEeCCCCc----HHHHHhcc-cCccccccccCcccccCchhhcccCCccceEEEEEeC
Confidence 55799999999999999987 455566654 23333342 22211000 00011122233333233
Q ss_pred CC--------------CceEEEecCCCccccCC-hhccch---hhcCCccEEEEccccccCch-----hHH----HHHHH
Q 016868 157 DG--------------EREFMFYRNPSADMLLQ-EAELDL---SLITKAKIFHYGSISLITEP-----CKS----AHIAA 209 (381)
Q Consensus 157 ~g--------------~~~~~~~~~~~~~~~~~-~~~l~~---~~i~~~~~~~~~~~~~~~~~-----~~~----~~~~~ 209 (381)
.| ..+|+...+...+..+. .+++.. +.-.+.|.++++|+.++.+. ..+ ...+.
T Consensus 167 ~G~~~g~~~~~~~aPraNRfI~s~D~~nn~~l~~~e~f~~~l~~~~~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~~ 246 (450)
T d1u2xa_ 167 KGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKED 246 (450)
T ss_dssp TTCEEEETTEEEECCSCEEEEEEECCGGGGCCSCCTTTGGGHHHHHHTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHH
T ss_pred CCCeeecCCceEecCCCceEEEecCCcccccccchHHHHHHHHhcccCCCEEEEechhhhhccccCchhHHHHHHHHHHH
Confidence 33 23344432322222222 222221 12235799999999876322 222 22233
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhccC
Q 016868 210 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 263 (381)
Q Consensus 210 l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~~ 263 (381)
+...++.+++|-|.... +.+.+-..+.+..+++++|-+-+|+.|+..|..
T Consensus 247 l~~~~~~~i~iHlElAs----~~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~ 296 (450)
T d1u2xa_ 247 IIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGIDEAEIAQILS 296 (450)
T ss_dssp HHHHHHTTCEEEEECCC----CCCHHHHHHHHHHHGGGSSEEEEEHHHHHHHHH
T ss_pred HHhCCCCCCeEEEEecc----cchHHHHHHHHHHhccccccCCCCHHHHHHHHH
Confidence 44455678999899864 345667777887899999999999999987753
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=98.03 E-value=0.0003 Score=65.14 Aligned_cols=161 Identities=8% Similarity=0.073 Sum_probs=93.8
Q ss_pred cccCCChHHHHHHHHHHcC-CceEEEeecCCChHHHHHHHHHHHCCCCCCCeeecC--------------CCCceEEEEE
Q 016868 89 KKAPGGAPANVAVGIARLG-GSSAFIGKVGADEFGYMLADILKENNVNGAGMRFDP--------------GARTALAFVT 153 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG-~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~~~--------------~~~t~~~~~~ 153 (381)
..+.||.+..+|-.|+++| .+|.+.+.++... -.+.+.. +. .++.... ....-+-+++
T Consensus 115 ~~rmGGnAgimAn~La~l~~~~vi~~~p~~~k~----q~~lf~~-~~--i~~P~v~~~~~~l~~p~e~~~~e~d~IHlIl 187 (467)
T d1gc5a_ 115 ELRIGGQAGIMANLLGGVYRIPTIVHVPQNPKL----QAELFVD-GP--IYVPVFEGNKLKLVHPKDAIAEEEELIHYIY 187 (467)
T ss_dssp EEEEESHHHHHHHHHHHTSCCCEEECCSCCCHH----HHTTSCS-SS--EEEEEECSSCEEEECGGGSCCSCCCCEEEEE
T ss_pred hcccCCHHHHHHHHHHhcCCceEEEecCcchHH----HHHHhcC-CC--cccceecCCceeecCchhhccCCCCceEEEE
Confidence 4678999999999999998 4666666766532 1222222 11 1111111 1123345555
Q ss_pred ecCCCC----------ceEEEecCCCccccC-Chhccch---hhcCCccEEEEccccccCch-----h----HHHHHHHH
Q 016868 154 LRSDGE----------REFMFYRNPSADMLL-QEAELDL---SLITKAKIFHYGSISLITEP-----C----KSAHIAAA 210 (381)
Q Consensus 154 ~~~~g~----------~~~~~~~~~~~~~~~-~~~~l~~---~~i~~~~~~~~~~~~~~~~~-----~----~~~~~~~l 210 (381)
-.+.|+ .+|+...+. .+..+ ..+++.. +...+.|.++++|+.++++. . .+...+.+
T Consensus 188 EY~~G~~wg~~~aPraNRfI~s~D~-~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~~~l 266 (467)
T d1gc5a_ 188 EFPRGFQVFDVQAPRENRFIANADD-YNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHL 266 (467)
T ss_dssp EECSSCEETTEECSSCEEEEEECCS-STTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHH
T ss_pred EeCCCCeecceecCCCCeEEEeCCC-CCccCcccHHHHHHHHhhccCCCEEEEEchhhccccCCCchhHHHHHHHHHHHH
Confidence 555554 233333222 22222 2223321 22347899999999877531 1 22333445
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 211 KAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 211 ~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
...++.++++=|..... .+ +..+..+.++++++|-+=+|+.|+..|.
T Consensus 267 ~~l~~~~i~iH~ElAs~----~d-~~l~~~i~~ilp~vDSlGmNEqEL~~l~ 313 (467)
T d1gc5a_ 267 NILNRYNVKSHFEFAYT----AN-RRVREALVELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HHHHHTTCEEEEECCCC----CC-HHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred HhcCcCCCceEEEecch----hh-HHHHHHHHHhccccccCCCCHHHHHHHH
Confidence 55556789998888642 23 4566666679999999999999998665
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.00 E-value=0.00082 Score=61.92 Aligned_cols=161 Identities=11% Similarity=0.100 Sum_probs=93.5
Q ss_pred cccCCChHHHHHHHHHHcCCc-eEEEeecCCChHHHHHHHHHHHCCCCCCCeee--------------cCCCCceEEEEE
Q 016868 89 KKAPGGAPANVAVGIARLGGS-SAFIGKVGADEFGYMLADILKENNVNGAGMRF--------------DPGARTALAFVT 153 (381)
Q Consensus 89 ~~~~GG~~~NvA~~la~LG~~-v~li~~vG~D~~g~~i~~~l~~~gi~~~~v~~--------------~~~~~t~~~~~~ 153 (381)
..+.||.+.-+|-.|+++|.. |.+.+.++.....+ .+.. |. + ++.. .++.+.-+-+++
T Consensus 106 ~~r~GGnAgimAn~la~l~~~~Vi~~~p~~sk~qa~----~f~~-~~-i-~~P~~~~~~~~l~~p~e~~~~e~~~IHlIl 178 (454)
T d1ua4a_ 106 ELRMGGQAGIMANLLGGVYGVPVIVHVPQLSRLQAN----LFLD-GP-I-YVPTLENGEVKLIHPKEFSGDEENCIHYIY 178 (454)
T ss_dssp EEEEESHHHHHHHHHTTTTCCCEEECCSCCCHHHHT----TSCS-SS-E-EEEEEETTEEEEECGGGCSCCCCCCEEEEE
T ss_pred cEecCCHHHHHHHHHHhcCCceEEEecCCchHHHHH----HhcC-CC-c-ccceeecCceeecCchhhcCCCCcceEEEE
Confidence 457999999999999999865 55556666531111 1111 11 0 1111 011223344555
Q ss_pred ecCCCC----------ceEEEecCCCccccC-Chhccch---hhcCCccEEEEccccccCchh----HHHHHHHHHHHHH
Q 016868 154 LRSDGE----------REFMFYRNPSADMLL-QEAELDL---SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKD 215 (381)
Q Consensus 154 ~~~~g~----------~~~~~~~~~~~~~~~-~~~~l~~---~~i~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~ 215 (381)
-.+.|+ .+|+...+. .+..+ ..+.+.. +...+.|.++++|+.++++.+ .+...+.++..+.
T Consensus 179 EY~~G~~wg~~~aPraNRfI~s~D~-~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~ 257 (454)
T d1ua4a_ 179 EFPRGFRVFEFEAPRENRFIGSADD-YNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNE 257 (454)
T ss_dssp EECTTCEETTEECSSCEEEEEECCS-SGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHH
T ss_pred EeCCCCeecceecCCCceEEEeCCC-CCccCcccHHHHHHHHHhccCCCEEEEEccccccchhhHHHHHHHHHHHHhcCc
Confidence 445554 244443232 22222 2233332 223468999999998765332 2333344555567
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhcc
Q 016868 216 AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 262 (381)
Q Consensus 216 ~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l~ 262 (381)
.+++|=|..... .+ +..+..+..+++++|-+=+|+.|+..|.
T Consensus 258 ~~i~IH~ElAs~----~d-~~l~~~i~~vlp~vDSlGmNEqEL~~l~ 299 (454)
T d1ua4a_ 258 REIPVHLEFAFT----PD-EKVREEILNVLGMFYSVGLNEVELASIM 299 (454)
T ss_dssp TTCCEEEECCCC----CC-HHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred cCCceEEEeccc----cH-HHHHHHHHHhCCcCCcCCCCHHHHHHHH
Confidence 789999998742 23 4566666789999999999999988764
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.93 E-value=0.00024 Score=65.61 Aligned_cols=73 Identities=12% Similarity=0.172 Sum_probs=53.0
Q ss_pred CCccEEEEccccccCchh----HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhh
Q 016868 185 TKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 260 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~ 260 (381)
.+.|.++++|+.+++..+ .....+.++..+..++++=|..... .+ +..+..+..+++++|-+=+|+.|+..
T Consensus 221 ~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~----~d-~~~~~~l~~vlp~vdSlGmNEqEL~~ 295 (451)
T d1l2la_ 221 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFT----PD-EVVRLEIVKLLKHFYSVGLNEVELAS 295 (451)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCC----SS-HHHHHHHHHHGGGCSEEEECHHHHHH
T ss_pred cCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccc----hH-HHHHHHHHHhcccCccCCcCHHHHHH
Confidence 478999999998765433 2233344555667789998888642 22 56667677899999999999999876
Q ss_pred cc
Q 016868 261 LT 262 (381)
Q Consensus 261 l~ 262 (381)
|.
T Consensus 296 l~ 297 (451)
T d1l2la_ 296 VV 297 (451)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.67 E-value=0.00044 Score=60.07 Aligned_cols=173 Identities=11% Similarity=0.039 Sum_probs=100.4
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhc
Q 016868 182 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 261 (381)
Q Consensus 182 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~N~~E~~~l 261 (381)
+..++.+.+.++.-.-..+ .....+.+.....+.++++|...-.. + . ...+. ..+...|++||..|++.|
T Consensus 93 ~~~~~~~a~~iGpGlg~~~---~~~~~~~~~~~~~~~~~vldadal~~-~-~----~~~l~-~~~~~~IlTPH~gE~~rL 162 (278)
T d2ax3a1 93 ELSKDVDVVAIGPGLGNNE---HVREFVNEFLKTLEKPAVIDADAINV-L-D----TSVLK-ERKSPAVLTPHPGEMARL 162 (278)
T ss_dssp HHHHTCSEEEECTTCCCSH---HHHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHHH-TCSSCEEECCCHHHHHHH
T ss_pred HhcccCCEEEecCCcccch---HHHHHHHHHHhccchheecchhhhhh-h-h----hhhhh-hcCCCEEeCCCHhHHHHH
Confidence 3456778887765322222 23333344456678899998631000 0 0 11111 123456899999999999
Q ss_pred cCCCCC---ChHHHHHHHHh-cCCCEEEEEecCCceEEEeCCceEEEccccccccCCCCccHHHHHHHHHHHHcCCcccc
Q 016868 262 TQGEDP---YDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 337 (381)
Q Consensus 262 ~~~~~~---~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~l~~l~~g~~~~~ 337 (381)
++.... +..+.++.+.+ .++ +|+-.|.. .++.++++.+ +-........+.|.||+++|.+..-+.++.+
T Consensus 163 ~~~~~~~~~~~~~~a~~~a~~~~~--~vvlKG~~-t~i~~~~~~~-~~~~g~~~la~~GtGDvLaGiIaallAq~~~--- 235 (278)
T d2ax3a1 163 VKKTVGDVKYNYELAEEFAKENDC--VLVLKSAT-TIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS--- 235 (278)
T ss_dssp HTCCHHHHTTCHHHHHHHHHHHTS--EEEECSSS-EEEECSSCEE-EECCCC-CCSSTTHHHHHHHHHHHHHHTTCC---
T ss_pred hhcccchhhhHHHHHHHHHHHcCC--cEEecCcc-ccccCcccce-eecCCCCccccccchhHHHHHHHHHHHcCCC---
Confidence 986532 12345555543 443 45555533 3444544444 4333445678899999999988888899999
Q ss_pred chHHHHHHHHHHHHHHHHH---hhhcCCCCCCCCHHHHHHHHhC
Q 016868 338 KEDQLRDALRFANACGALT---VMERGAIPALPTREAVLNAIHA 378 (381)
Q Consensus 338 ~~~~l~~al~~A~~~Aa~~---~~~~G~~~~~~~~~~v~~~l~~ 378 (381)
+.+|...|...-+.+ ..+.+ .+ ...++|-+.+.+
T Consensus 236 ----~~~A~~~a~~lhg~aa~~a~~~~--~g-~~Asdi~~~ip~ 272 (278)
T d2ax3a1 236 ----PLEASTVSVYLHGFAAELFEQDE--RG-LTASELLRLIPE 272 (278)
T ss_dssp ----HHHHHHHHHHHHHHHHHTCSSCG--GG-CCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHcCC--CC-cCHHHHHHHHHH
Confidence 889988886444433 33322 13 367777766543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=81.38 E-value=1.5 Score=31.50 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=37.1
Q ss_pred cCCCh--HHHHHHHHHHcCCceEEEeecC------CChHHHHHHHHHHHCCCCC
Q 016868 91 APGGA--PANVAVGIARLGGSSAFIGKVG------ADEFGYMLADILKENNVNG 136 (381)
Q Consensus 91 ~~GG~--~~NvA~~la~LG~~v~li~~vG------~D~~g~~i~~~l~~~gi~~ 136 (381)
..||. |.=.|..++++|.+|+++-.-. +...++.+.+.|+++||++
T Consensus 27 IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~~ll~~~d~ei~~~l~~~l~~~Gv~i 80 (119)
T d3lada2 27 VIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKI 80 (119)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEE
T ss_pred EECCChHHHHHHHHHHHcCCceEEEEeecccCCcccchhHHHHHHHHHhcCcee
Confidence 34444 7788999999999999998654 3468999999999999863
|