Citrus Sinensis ID: 016869

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccccccccccccccHHHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITdlgvdapiTQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVqgnflfnkafqftsissvtlldccaipcaiVFTWVFLGTRYSVWQLFGASLCVLGLGLMllsdaemaggggsrplLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLcgmikfpfafiplpsfrstlelkslesvkWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSttakdllpipalengnydvqyqrlddenmasrgkesfy
Flexible Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDenmasrgkesfy
Low Complexity Region (SEG)
MNLMNAIISCWSGRSQMAlrtlyllllgqlvsfslalSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASlcvlglglmllSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Disordered region (IsUnstruct)
***MNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQY*****************
Disordered Region (DISOPRED)
***********SGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA*******S*PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK**********************************
Disordered Region (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENM*********
Disordered Region (DISPRO)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA***********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	381	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.761	0.710	0.315	2e-41
Q8BGK5	408	Solute carrier family 35	yes	no	0.761	0.710	0.318	1e-40
Q8IXU6	374	Solute carrier family 35	no	no	0.740	0.754	0.307	4e-39
Q7TML3	375	Solute carrier family 35	no	no	0.761	0.773	0.300	2e-38
Q0V9U2	391	Solute carrier family 35	yes	no	0.774	0.754	0.301	1e-36
O59785	505	Uncharacterized solute ca	yes	no	0.761	0.574	0.257	3e-24

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 178/336 (52%), Gaps = 46/336 (13%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE++++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL 257
           RVE + MIG++G   S +QL                                     + +
Sbjct: 246 RVEFLGMIGLFGAFFSGIQL-------------------------------------AIM 268

Query: 258 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 317
           E K L  V W   I L +VG +A  F  Y+ +P V+K + AT + LS+LT+D++++   +
Sbjct: 269 EHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGL 328

Query: 318 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 353
           F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 329 FLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  167 bits (424), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 176/336 (52%), Gaps = 46/336 (13%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  +  D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++SV LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE +++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL 257
           RVE + MIG++G   S +QL                                     + +
Sbjct: 246 RVEFLGMIGLFGAFFSGIQL-------------------------------------AIM 268

Query: 258 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 317
           E K L  V W   I L +VG +A  F  Y+ +P V+K + AT + LS+LT+D++++   +
Sbjct: 269 EHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGL 328

Query: 318 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 353
           F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 329 FLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  162 bits (410), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 174/328 (53%), Gaps = 46/328 (14%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y+LLG  DV+ N++  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
               ++C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL 257
           R E + M+G++G ++S +QL                                       +
Sbjct: 225 RQEFLGMVGLFGTIISGIQLL-------------------------------------IV 247

Query: 258 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 317
           E K + S+ W   I L FV  A   F  Y+ +P V+K++ AT + L +LT+D++++ + +
Sbjct: 248 EYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGL 307

Query: 318 FCYHQQVNWTYYLAFAAVLIGLIIYSTT 345
           F +  + +  Y L+F  +++G I+Y +T
Sbjct: 308 FLFGYKFSGLYILSFTVIMVGFILYCST 335

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 174/336 (51%), Gaps = 46/336 (13%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRR------QRL 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L ++       + L
Sbjct: 45  LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y LLG  DV+ N+L  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 RRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
                +C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL 257
           R E + M+G++G ++S +QL                                       +
Sbjct: 225 RQEFLGMVGLFGTIISGIQLL-------------------------------------IV 247

Query: 258 ELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRI 317
           E K +  ++W   I L FV  A   F  Y+ +P V+K++ AT + L +LT+D++++   +
Sbjct: 248 EYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGL 307

Query: 318 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 353
           F +  + +  Y L+F  +++G I+Y +T    +  P
Sbjct: 308 FLFEYKFSGLYILSFTVIMVGFILYCSTPTRTVEPP 343

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 50/345 (14%)

Query: 14  RSQMALRTLYLLLLGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGIL 72
           R+  +   L  + LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L
Sbjct: 32  RNVFSREMLLSVALGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTL 91

Query: 73  LYRRQR------LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVF 126
             R+        L+  W+ Y+ LG +D++  +L  KA Q+T+  S+ LL+C  IP  I+ 
Sbjct: 92  AVRQGEENLLAILKRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILL 151

Query: 127 TWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGG------GSRPLLGDILVIAGAI 180
           +W FL  RY V    GA  C+LG+G M  +D  M          G   L+GD+LV+ GA 
Sbjct: 152 SWFFLLVRYKVLHFIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGAT 211

Query: 181 FFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGM 240
            + +S V +E++V+ + RVE++ MIG++G   S +QL                       
Sbjct: 212 LYGISSVCQEYIVRNLSRVELLGMIGLFGSFFSGIQL----------------------- 248

Query: 241 IKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATM 300
                         + +E K L  V W   I L +VG  A  F  Y+ +P V+K + AT 
Sbjct: 249 --------------AIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMPVVIKKTSATA 294

Query: 301 LILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 345
           + LS+LT++++     +F +H + +  Y L+F  +L+GL+ Y +T
Sbjct: 295 INLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFST 339

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 56/346 (16%)

Query: 14  RSQMALRTLYLLL---------LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSL 64
            S    + LY LL         LGQ++S  +  ++     ++ +  + P  Q+ L Y  L
Sbjct: 125 ESTPKAKPLYFLLDKRFWIVFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALL 183

Query: 65  ALAYGGILLYR-------RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDC 117
            L Y    ++R           +  W  Y++  F DV+GN+    A+Q+T++ S +LLD 
Sbjct: 184 TLVYTPYTVFRMGFKKYFEMIFRHGWK-YIIFAFFDVEGNYFVVLAYQYTNMLSASLLDS 242

Query: 118 CAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG-GGSRPLLGDILVI 176
            A    ++ +++FL  RY   Q+ G   C+ GL L+++SD    G      P LGD  +I
Sbjct: 243 WATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMI 302

Query: 177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTS 236
            GA  + +S   EE+   K+    V+  + +YG ++S++Q +         F  + LYT 
Sbjct: 303 IGATCYGVSNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTF--------IFDRHHLYT- 353

Query: 237 LCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLS 296
                                       + W++++     G     F+ Y+L P + ++S
Sbjct: 354 ----------------------------LHWTSEMGGYLAGFILVMFLLYSLAPILFRMS 385

Query: 297 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 342
            AT   +S+LTSD W++++ I  +   V W Y +AF  +++GL +Y
Sbjct: 386 SATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVLIILGLFVY 431

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
297740093	337	unnamed protein product [Vitis vinifera]	0.874	0.988	0.6	1e-123
359481996	352	PREDICTED: solute carrier family 35 memb	0.874	0.946	0.594	1e-121
359481998	673	PREDICTED: solute carrier family 35 memb	0.871	0.493	0.590	1e-116
297740094	337	unnamed protein product [Vitis vinifera]	0.868	0.982	0.592	1e-116
255575633	340	conserved hypothetical protein [Ricinus	0.855	0.958	0.612	1e-102
357511003	363	Solute carrier family 35 member F1 [Medi	0.821	0.862	0.532	4e-95
357511005	349	Solute carrier family 35 member F2 [Medi	0.818	0.893	0.522	3e-90
224134462	267	predicted protein [Populus trichocarpa]	0.682	0.973	0.610	9e-88
297740095	356	unnamed protein product [Vitis vinifera]	0.769	0.823	0.548	3e-86
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.797	0.876	0.497	7e-82

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/370 (60%), Positives = 279/370 (75%), Gaps = 37/370 (10%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           +S W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLAL 
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
           YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+ T
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LC++GLGL+LLSDA + GG GSRPLLGDILVIAG +FFA+S V
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247
           GEEF VKK DRVEVV MIG++GLLVSV ++                              
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEI------------------------------ 210

Query: 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLT 307
                  S +ELKSLESV+WSTDIIL FVG A S+F+FYT+VPF+L++SGAT   LS+LT
Sbjct: 211 -------SIMELKSLESVEWSTDIILGFVGYAVSTFLFYTIVPFLLQISGATWFNLSLLT 263

Query: 308 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRL 367
           SDMWAV++RIF YHQ+V+W YY++FA V +GL+IYS T KD +P+P L +GN++ +YQ L
Sbjct: 264 SDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSKTEKDPIPLPTLGDGNHNAEYQVL 323

Query: 368 DDENMASRGK 377
           D+EN  SR +
Sbjct: 324 DEENTESRNE 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/372 (59%), Positives = 278/372 (74%), Gaps = 39/372 (10%)

Query: 6   AIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLA 65
           A +  W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 66  LAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIV 125
           L YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 126 FTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMS 185
            TW+FLGTRYS+WQ FGA+LC++GLGL+LLSDA +  G GSRPLLGDILVIAG +FFA+S
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGV--GDGSRPLLGDILVIAGTLFFALS 193

Query: 186 YVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPF 245
            VGEEF VKK DRVEVV MIG++GLLVSV ++                            
Sbjct: 194 NVGEEFCVKKKDRVEVVTMIGIFGLLVSVCEI---------------------------- 225

Query: 246 AFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSV 305
                    S +ELKSLESV+WSTDIIL FVG A S+F+FYT+VPF+L++SGAT   LS+
Sbjct: 226 ---------SIMELKSLESVEWSTDIILGFVGYAVSTFLFYTIVPFLLQISGATWFNLSL 276

Query: 306 LTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQ 365
           LTSDMWAV++RIF YHQ+V+W YY++FA V +GL+IYS T KD +P+P L +GN++ +YQ
Sbjct: 277 LTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSKTEKDPIPLPTLGDGNHNAEYQ 336

Query: 366 RLDDENMASRGK 377
            LD+EN  SR +
Sbjct: 337 VLDEENTESRNE 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/369 (59%), Positives = 270/369 (73%), Gaps = 37/369 (10%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 337 MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 396

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 397 NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 456

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 457 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 516

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247
           GEEF VKK DRVE++ M+G++GLLVSV ++                              
Sbjct: 517 GEEFCVKKKDRVELMSMLGLFGLLVSVCEI------------------------------ 546

Query: 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLT 307
                  S +ELKSLES++WST I+L+FVG A S+F+FYTLVPF+LK+SGATM  LS LT
Sbjct: 547 -------SIVELKSLESIEWSTKIVLAFVGFALSNFLFYTLVPFLLKISGATMFNLSALT 599

Query: 308 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRL 367
           SDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYSTT KD +P P+ E+GN   QYQ L
Sbjct: 600 SDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYSTTEKDPIPSPSPEDGNLSAQYQVL 659

Query: 368 DDENMASRG 376
           + E+  SR 
Sbjct: 660 NGESTESRN 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/368 (59%), Positives = 270/368 (73%), Gaps = 37/368 (10%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF 247
           GEEF VKK DRVE++ M+G++GLLVSV ++                              
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEI------------------------------ 210

Query: 248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLT 307
                  S +ELKSLES++WST I+L+FVG A S+F+FYTLVPF+LK+SGATM  LS LT
Sbjct: 211 -------SIVELKSLESIEWSTKIVLAFVGFALSNFLFYTLVPFLLKISGATMFNLSALT 263

Query: 308 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRL 367
           SDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYSTT KD +P P+ E+GN   QYQ L
Sbjct: 264 SDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYSTTEKDPIPSPSPEDGNLSAQYQVL 323

Query: 368 DDENMASR 375
           + E+  SR
Sbjct: 324 NGESTESR 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/364 (61%), Positives = 266/364 (73%), Gaps = 38/364 (10%)

Query: 9   SCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAY 68
           SC   +S   L+ LYLLLLGQ+VSF LA+ S T++++ DLG+DAPITQS   Y +LAL +
Sbjct: 8   SCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFNYFALALVF 67

Query: 69  GGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTW 128
           G ILLYRRQ+L+VSWYWYLLLGFVDVQGN+L N+A+Q+TSI+SVTLLDC  I  AIV TW
Sbjct: 68  GSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTIVWAIVLTW 127

Query: 129 VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVG 188
            FLGTRYS+WQLFGA+LCVLGLGL+LLSDA + GGGGSRPLLGD+LVIAG IFFA+S VG
Sbjct: 128 FFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTIFFALSNVG 187

Query: 189 EEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFI 248
           EEF VK  DRVEVV M+G++GLLVSVVQL                               
Sbjct: 188 EEFFVKNKDRVEVVAMLGIFGLLVSVVQL------------------------------- 216

Query: 249 PLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTS 308
                 S LELK+L+S+ W+ DIIL+  G   S FMFYTL PFVLKL GATM  LS+LTS
Sbjct: 217 ------SVLELKTLKSINWTADIILAIAGYTLSMFMFYTLTPFVLKLGGATMFNLSMLTS 270

Query: 309 DMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD-LLPIPALENGNYDVQYQRL 367
           DMWAV+ RI  YHQ+V+W Y+L+ A V +GLIIYSTT K+   PIPALE GN + +YQ L
Sbjct: 271 DMWAVVFRICFYHQEVDWLYFLSLAVVTVGLIIYSTTDKESSAPIPALEEGNSNGEYQVL 330

Query: 368 DDEN 371
           +D N
Sbjct: 331 NDGN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  354 bits (909), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 246/364 (67%), Gaps = 51/364 (14%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
            L+L SD       GGGGS+P+LGD+LVI G +F+A+S V EEF VKK DRVE V M+GV
Sbjct: 148 SLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGTVFYAISNVVEEFCVKKKDRVETVTMLGV 207

Query: 208 YGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKW 267
           YG LV+ +++                                     S LELK+L+S+KW
Sbjct: 208 YGFLVTAIEV-------------------------------------SVLELKTLKSIKW 230

Query: 268 STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT 327
           S+DI+L+F G   SSFMFY+L PFVLKLSG+TM  LS+LTSD+WAV+ R+F YHQ+V+W 
Sbjct: 231 SSDIVLAFAGYGVSSFMFYSLAPFVLKLSGSTMFNLSLLTSDIWAVVFRVFIYHQKVDWL 290

Query: 328 YYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDVQYQRLDDEN----------MASRG 376
           Y+++F  V IGLIIYSTT K L+P  A  E+ N + +YQ L+ EN          +ASRG
Sbjct: 291 YFVSFLVVAIGLIIYSTTEKKLVPASATTEDENLNTEYQILNGENESSTFAQNDSLASRG 350

Query: 377 KESF 380
           K  +
Sbjct: 351 KPHW 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 185/354 (52%), Positives = 238/354 (67%), Gaps = 42/354 (11%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA----EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIG 206
            L+L SD        GGGGS+P+LGD+LVI G +FFA+S V EEF VKK DRVE V M+G
Sbjct: 148 SLVLFSDTWDGGGGGGGGGSKPILGDVLVIVGTVFFAVSNVVEEFCVKKKDRVEAVTMLG 207

Query: 207 VYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVK 266
           VYG LV+ +++                                     S LELK+L+S+K
Sbjct: 208 VYGFLVTAIEV-------------------------------------SVLELKTLKSIK 230

Query: 267 WSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW 326
           WS DI+L+F G   SSF++ +L PFVLK  G+ M  LS+LTSDMWAV+ R+F YHQ+V+W
Sbjct: 231 WSGDIVLAFAGYGVSSFIYCSLAPFVLKFGGSAMFNLSLLTSDMWAVLFRVFIYHQKVDW 290

Query: 327 TYYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDVQYQRLDDENMASRGKES 379
            Y+++F  V IGLIIYSTT K L+P  A  E+ N + +YQ L+ E+ ++   +S
Sbjct: 291 LYFVSFLVVGIGLIIYSTTEKKLVPASATTEDENLNTEYQILNGESESTTLDQS 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  330 bits (845), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 182/298 (61%), Positives = 213/298 (71%), Gaps = 38/298 (12%)

Query: 49  GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
           GVDAP+TQS   YL+LAL YG ILLYRRQ+LQVSWYWYLLLGFVDVQGN+L NKA+QF+S
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG-GGGSR 167
           I+SVTLLDC  +   I  TW FLGTRY++WQL GA++CVLGLGL+LLSDA +A   GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMIT 227
           P+LGD LVI G IFFA+S VGEEF VKK  RVEVV MIGVYG LVS V+L          
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVEL---------- 170

Query: 228 FTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYT 287
                                      S +ELKSLE+V WS DI+ +  G   S F+FY+
Sbjct: 171 ---------------------------SIVELKSLEAVAWSKDIVFAIAGYTLSMFLFYS 203

Query: 288 LVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 345
           L PFVLKLSGATM  LS+LT+DMWAV+ R+F YHQQV+W Y+L+FA V IGLIIYS T
Sbjct: 204 LAPFVLKLSGATMFNLSILTADMWAVVFRVFFYHQQVDWLYFLSFAIVAIGLIIYSLT 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740095|emb|CBI30277.3| unnamed protein product [Vitis vinifera]

 Score =  325 bits (832), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 181/330 (54%), Positives = 229/330 (69%), Gaps = 37/330 (11%)

Query: 14  RSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL 73
           R++  LR  Y L LGQ+VSF +A SSF T+ + DLGV+ P+TQS   YL L L +G I L
Sbjct: 28  RNERLLRNAYALFLGQVVSFLVAFSSFFTSSVIDLGVNVPLTQSFFAYLCLVLVFGTIRL 87

Query: 74  YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
            RRQ ++VSW WYL LGFVDVQGN+L  KA+Q++S +SVTLLDC  IP A++FTW+ LGT
Sbjct: 88  GRRQNIRVSWIWYLFLGFVDVQGNYLVKKAYQYSSATSVTLLDCWTIPWAMIFTWIVLGT 147

Query: 134 RYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
           RYS+ Q FGA+LCV GL  + LSDA   GGGGS+P+LGD LV+AG +F AMS VGEEF V
Sbjct: 148 RYSIRQFFGAALCVAGLASVFLSDAGAGGGGGSKPILGDTLVVAGTLFLAMSNVGEEFCV 207

Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSF 253
           KK D VEVV MIG +GLLVS  ++Y                                   
Sbjct: 208 KKKDSVEVVAMIGAFGLLVSACEIY----------------------------------- 232

Query: 254 RSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAV 313
              +E ++L+S+KWS DIIL   G+  S+F+FYTLVPF+LKLSGATML LS+LTSD+WAV
Sbjct: 233 --IMEFETLKSIKWSPDIILGLAGHVLSTFLFYTLVPFLLKLSGATMLSLSLLTSDLWAV 290

Query: 314 ILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 343
           ++R++ YHQ+V+W YYL+FA + IGLIIYS
Sbjct: 291 VIRVYFYHQKVDWLYYLSFATITIGLIIYS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  310 bits (794), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 173/348 (49%), Positives = 221/348 (63%), Gaps = 44/348 (12%)

Query: 32  SFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGF 91
           +F++A SSFT+++I +LGVDAP+TQS   YL L L Y  I+L RRQ+LQ++WYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 92  VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151
            DVQGN+L  KA+Q++ I+SVTLLDC  +   I+ TW  LGTRYS+WQ  GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 152 LMLLSDAE--MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYG 209
           L+LLSDAE       G  PLLGD+LVIAG + FA S VGEE+ VKK DRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 210 LLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWST 269
           LL+S+VQ+  F                                     E K LE+V WS 
Sbjct: 201 LLISIVQILIF-------------------------------------ERKGLEAVTWSP 223

Query: 270 DIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY 329
            +I  F G A + F+FYT+ PFVLK+SGAT+  LS+LTSDMWAV +R+  Y QQ+NW YY
Sbjct: 224 TMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLLTSDMWAVAIRVLFYQQQINWLYY 283

Query: 330 LAFAAVLIGLIIYS--TTAKDLLPIPALENGNYDVQYQRLDDENMASR 375
           LAF  V IGLIIYS   ++ D     + E      QYQ+L  E+ ++R
Sbjct: 284 LAFTVVAIGLIIYSLNDSSSDDETAGSTEA---PAQYQQLPIEDNSTR 328

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.797	0.837	0.402	1.3e-59
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.650	0.744	0.381	1.2e-40
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.669	0.752	0.385	6.8e-40
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.498	0.455	0.343	5.2e-26
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.650	0.663	0.315	2.2e-25
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.650	0.661	0.315	2.2e-25
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.685	0.608	0.304	3.3e-25
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.669	0.625	0.298	3.6e-25
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.669	0.625	0.301	9.7e-25
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.467	0.446	0.269	1.7e-24

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 126/313 (40%), Positives = 187/313 (59%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             + FT++ +   G++ P +Q  L Y+ LA+ YG I+LYRR  ++  WY+Y LL FVDV+ N
Sbjct:    30 NGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRSDIKAKWYYYFLLAFVDVEAN 89

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA+Q+TS++SV LLDC AIPC +V TW +L T+Y + ++ G             SD
Sbjct:    90 FLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRLMKISGVFICIVGVFMVVFSD 149

Query:   158 AEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVV 215
                AG   GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G +G ++S +
Sbjct:   150 VH-AGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFFGAIISAI 208

Query:   216 QLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSF 275
             Q+      ++    ++   T   G +    + +   + R  + +  L   ++    +  F
Sbjct:   209 QVSILERDELKAIHWS---TGAVGFLAMAISILTSANQRRHILVYLLHFSRFQ---VFPF 262

Query:   276 VGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV 335
             +    + F+FY LVP +LK +GATM  LS+LTSDMWAV++R F YH++V+W Y+LAFA  
Sbjct:   263 LRFTLTMFLFYPLVPVLLKTNGATMFNLSLLTSDMWAVLIRTFGYHEKVDWLYFLAFATT 322

Query:   336 LIGLIIYSTTAKD 348
               GLIIYS   KD
Sbjct:   323 ATGLIIYSMKEKD 335

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 98/257 (38%), Positives = 152/257 (59%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             ++FT++ +   G++AP +Q+ L Y  LA+ YGGI+LYRR  ++  WY Y LL  VDV+GN
Sbjct:    33 NAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRPTIKGKWYHYFLLALVDVEGN 92

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA Q+TSI+S+ LLDC AIPC +V TW+FL T+Y + ++ G             SD
Sbjct:    93 FLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRLMKISGVFICIAGVVMVLFSD 152

Query:   158 AEMAG-GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQ 216
                    GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G++G ++S +Q
Sbjct:   153 VHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLFGAIISAIQ 212

Query:   217 LYPFLLGDM--ITFTYNKLYTSL-CGMIKFPF-AFIP--LPSFRSTL-ELKSLESVKWST 269
             +  F  G++  I ++ + ++  L   +  F F + +P  L +  ST+  L  L S  W+ 
Sbjct:   213 VAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILLRTNGSTMFTLSLLTSDMWAV 272

Query:   270 DIILSFVGNAASSFMFY 286
              +I  F  +    +++Y
Sbjct:   273 -LIRIFAYHEKVDWLYY 288

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 104/270 (38%), Positives = 153/270 (56%)

Query:    49 GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
             G+ AP +Q+ L Y+SLA+ YGGI+LYRR  ++V WY Y LL  VDV+ NFL  KAFQ TS
Sbjct:    42 GISAPTSQTFLGYVSLAIVYGGIMLYRRSAIKVKWYHYFLLAVVDVEANFLVVKAFQNTS 101

Query:   109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG--GGGS 166
             ++S+ LLDC AIPC +V TWVFL TRY + ++ G             SD   AG   GGS
Sbjct:   102 MTSIMLLDCWAIPCVLVLTWVFLKTRYRLMKISGVVICIVGVVMVVFSDVH-AGDRAGGS 160

Query:   167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMI 226
              P+ GD LVIAGA  +A+S V EEFLVK  D  E++  +G++G +++ +Q+  F  G + 
Sbjct:   161 NPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVR 220

Query:   227 TFTYNK----LYTS-LCGMIKF-PFAFIPLPSFRSTL-ELKSLESVKWSTDIILSFVGNA 279
                ++     LY     G+  F     I + +  ST+  L  L S  W+  +I +F  + 
Sbjct:   221 AIQWSTEAILLYIGGALGLFLFYTLITILIKNNGSTMFNLSLLTSDMWAI-LIRTFGYHE 279

Query:   280 ASSFMFYTLVPFVLKLSGATMLILSVLTSD 309
                ++++  + F    +G  ++I S+   D
Sbjct:   280 KVDWLYF--LAFATTATG--LIIYSMKEKD 305

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 68/198 (34%), Positives = 111/198 (56%)

Query:    40 FTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG 96
             F+  ++   GV+ P TQS+L Y+ L + Y  +L+ R    + ++    ++  L  VD++ 
Sbjct:    47 FSQLLVKKYGVNIPTTQSLLNYILLCV-YLLVLVKRGVLWETIKTKSIYFAPLALVDLEA 105

Query:    97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXS 156
             N++  KA+Q+T+I+SV LLDC  IPC +V + +FL TR++   +               S
Sbjct:   106 NYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHIIAVLIALAGMAILVVS 165

Query:   157 D---AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS 213
             D    E A GG S PLLGD L +A ++ +A+S VG+E  VKK DRV  + MIG+YG +  
Sbjct:   166 DIIEGESANGG-SNPLLGDFLCLASSVCYAISNVGQEATVKKYDRVTYLAMIGLYGSIFC 224

Query:   214 VVQLYPFLLGDMITFTYN 231
              +Q+      ++ T  ++
Sbjct:   225 GIQIAILERNELATMAWS 242

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 84/266 (31%), Positives = 133/266 (50%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L +R         L+  W+ Y+LLG  DV+ N++  +A
Sbjct:    69 VNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V      +           +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPF 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL   
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 LLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAA 280
                D+ +  ++     L   + F      L SF   L +K    V  +T + L  +  A 
Sbjct:   248 EYKDIASIHWDWKIALL--FVAFALCMFCLYSFMP-LVIK----VTSATSVNLGIL-TAD 299

Query:   281 SSFMFYTLVPFVLKLSGATMLILSVL 306
                +F  L  F  K SG  +L  +V+
Sbjct:   300 LYSLFVGLFLFGYKFSGLYILSFTVI 325

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 84/266 (31%), Positives = 132/266 (49%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRR------QRLQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L ++       + L+  W+ Y LLG  DV+ N+L  +A
Sbjct:    69 VNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V                  +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPF 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL   
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 LLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAA 280
                D+    ++     L   + F      L SF   L +K    V  +T + L  +  A 
Sbjct:   248 EYKDIARIQWDWKIALL--FVAFALCMFCLYSFMP-LVIK----VTSATSVNLGIL-TAD 299

Query:   281 SSFMFYTLVPFVLKLSGATMLILSVL 306
                +F+ L  F  K SG  +L  +V+
Sbjct:   300 LYSLFFGLFLFEYKFSGLYILSFTVI 325

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 287 (106.1 bits), Expect = 3.3e-25, P = 3.3e-25
 Identities = 86/282 (30%), Positives = 140/282 (49%)

Query:    41 TTAVITDLGVDAPITQS-----VLCY---LSLALAY--GGILLYRRQRLQVSWYWYLLLG 90
             ++ ++ +  V+AP  Q+     +LC+   +SLA      G+++  R+R    W  YL+L 
Sbjct:    80 SSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDENGLVVVLRKR---GWR-YLILA 135

Query:    91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXX 150
              +DV+ N++  KA+Q+T+++SV LLDC  IP  +  +W+FL  RY    + G +      
Sbjct:   136 IIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSVRYLASHILGVTICIIGI 195

Query:   151 XXXXXSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
                  +DA   + A  GGS  +LGDIL +A A+ +A+  V EEFLVK+  R E + M+G+
Sbjct:   196 ACVIWADALGDKGALDGGSNKVLGDILCLAAAVMYAICNVAEEFLVKQHSRTEYLGMLGL 255

Query:   208 YGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFP-FAFIPLPSFRSTLELKSLESVK 266
             +G +VS VQ   F    +    ++    S   +  F  F F  L +    L+  S     
Sbjct:   256 FGCIVSGVQTAVFEQEALSKIVWDGTIVSYFALFAFSMFIFYSLVTV--VLQKTSALMFN 313

Query:   267 WSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTS 308
              ST +   F       FMF     ++  +S    +I SV+ S
Sbjct:   314 LST-LTADFYSLLFGIFMFKDTFHYLYFVSFIVCIIGSVIYS 354

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 82/275 (29%), Positives = 136/275 (49%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE++++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 ----YPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIIL 273
                 +  LL     +    LY      +   ++F+P+   +++    +L  +  + D+  
Sbjct:   266 AIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLL--TADLYS 323

Query:   274 SFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTS 308
              F G     F+F+     +  LS  T+LI  VL S
Sbjct:   324 LFCG----LFLFHYKFSGLYLLSFFTILIGLVLYS 354

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 83/275 (30%), Positives = 135/275 (49%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++SV LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE +++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 ----YPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIIL 273
                 +  LL     +    LY      +   ++F+P+   +++    +L  +  + D+  
Sbjct:   266 AIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLL--TADLYS 323

Query:   274 SFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTS 308
              F G     F+F+     +  LS  T+LI  VL S
Sbjct:   324 LFCG----LFLFHYKFSGLYLLSFFTILIGLVLYS 354

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 201 (75.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
 Identities = 51/189 (26%), Positives = 95/189 (50%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR---RQRLQVSWY--W-YLLLGF 91
             ++F T ++ +   + P  Q+   Y  L + +    +Y+   +   ++ W   W Y++L F
Sbjct:    78 NTFNT-LLANKNTNIPAFQTFFNYSLLNIIFTSYTIYKYGIKGWFEMLWKRGWKYIILSF 136

Query:    92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXX 151
              DV+GN+    A+++T++ S  L++  AI   +V +++FL  RY + Q+ G         
Sbjct:   137 CDVEGNYFMVLAYEYTTMMSAQLINFWAIVVVVVVSFLFLRVRYHISQVLGILICIGGMG 196

Query:   152 XXXXSDAEMAGGGG--SR--PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
                 SD      GG  SR   + GD+  + GA F+ ++  GEEF V      EV+  +G 
Sbjct:   197 ILIASDHIQGTNGGDISRGNQIKGDLFALLGASFYGLANTGEEFFVSTAPVYEVIGQMGF 256

Query:   208 YGLLVSVVQ 216
             +G++++ VQ
Sbjct:   257 FGMIINGVQ 265

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	381
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	7e-85
pfam08449	303	pfam08449, UAA, UAA transporter family	0.003

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  260 bits (667), Expect = 7e-85
 Identities = 130/337 (38%), Positives = 194/337 (57%), Gaps = 45/337 (13%)

Query: 20  RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR--- 76
           RTL  L LGQ++S  +  ++ T+  + + GV+AP  Q+ L Y  L L Y GIL +RR   
Sbjct: 11  RTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRGEK 70

Query: 77  ---QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
                ++  W+ Y++L  +DV+ N+L  KA+Q+T+++SV LLDC AIP  +V +W FL  
Sbjct: 71  NLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFLKV 130

Query: 134 RYSVWQLFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEF 191
           RY    + G  +C+LG+  ++ SD  A     GGS P+LGDILV+AGA  +A+S V EEF
Sbjct: 131 RYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTEEF 190

Query: 192 LVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP 251
           LVKK+ R E + M+G++G ++S +Q   F                               
Sbjct: 191 LVKKLSRTEFLGMLGLFGAIISGIQTAIF------------------------------- 219

Query: 252 SFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMW 311
                 E K+L  + W  +I L F G A   F+ Y+L+P ++K + ATM  LS+LTSD W
Sbjct: 220 ------ERKALYKIHWDWEIGLLFAGFALCMFLLYSLMPILIKKTSATMFNLSLLTSDFW 273

Query: 312 AVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 348
           ++++ IF +H +V+W Y+LAFA ++IGLIIYS    D
Sbjct: 274 SLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKETD 310

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 47/274 (17%), Positives = 100/274 (36%), Gaps = 38/274 (13%)

Query: 75  RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTR 134
           + +  ++    Y+L+       + L N+A ++ S  +  +   C +   ++   +  G R
Sbjct: 56  KLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKR 115

Query: 135 YSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS---RPLLGDILVIAGAIFFAMSYVG--E 189
           YS  Q   A L  LG+ +  L+ A+ +           +G I ++ GA+    +  G  +
Sbjct: 116 YSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG-IALLFGALLM-DALTGNTQ 173

Query: 190 EFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP 249
           E L KK  +     M   + L +      PF L  ++      L+++    ++ P     
Sbjct: 174 EKLYKKYGKHSKEMMFYSHLLSL------PFFLLGLLDIRTGLLFSAESFCLRHPSVLFY 227

Query: 250 LPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSD 309
           L                    ++ S        F+FY      +   GA  + L      
Sbjct: 228 L--------------------LLNSLTQYVGQFFVFYL-----ISEFGALTVTLVTTLRK 262

Query: 310 MWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 343
             +++L +  +   +    +L    V +G+ +Y+
Sbjct: 263 FVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
KOG2766	336	consensus Predicted membrane protein [Function unk	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.94
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.87
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.82
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.79
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.78
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.78
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
COG2962	293	RarD Predicted permeases [General function predict	99.72
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.67
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.64
KOG1580	337	consensus UDP-galactose transporter related protei	99.61
KOG1581	327	consensus UDP-galactose transporter related protei	99.57
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.56
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.39
KOG1582	367	consensus UDP-galactose transporter related protei	99.3
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.28
COG2510	140	Predicted membrane protein [Function unknown]	99.26
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.19
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.19
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.09
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.08
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.07
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.05
COG2510	140	Predicted membrane protein [Function unknown]	99.05
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.93
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.89
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.88
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.86
PRK15430	296	putative chloramphenical resistance permease RarD;	98.63
PRK13499	345	rhamnose-proton symporter; Provisional	98.57
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.55
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.53
PRK11272	292	putative DMT superfamily transporter inner membran	98.51
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.51
PLN00411	358	nodulin MtN21 family protein; Provisional	98.49
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.47
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.39
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.38
PRK11689	295	aromatic amino acid exporter; Provisional	98.3
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.25
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.24
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.2
COG2962	293	RarD Predicted permeases [General function predict	98.17
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.14
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.09
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.07
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.01
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.92
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.92
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.59
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.57
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.55
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.35
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.33
COG2076	106	EmrE Membrane transporters of cations and cationic	97.3
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.27
PRK11431	105	multidrug efflux system protein; Provisional	97.27
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.26
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.17
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.15
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.07
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.94
COG2076	106	EmrE Membrane transporters of cations and cationic	96.93
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.88
PRK11431	105	multidrug efflux system protein; Provisional	96.87
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.85
PRK13499	345	rhamnose-proton symporter; Provisional	96.77
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.52
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.29
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.19
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.11
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.03
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.94
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.66
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.09
KOG1580	337	consensus UDP-galactose transporter related protei	94.05
KOG1581	327	consensus UDP-galactose transporter related protei	93.84
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.76
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	92.93
KOG2765	416	consensus Predicted membrane protein [Function unk	92.9
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	92.43
PRK02237	109	hypothetical protein; Provisional	91.85
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.84
KOG2922	335	consensus Uncharacterized conserved protein [Funct	91.16
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	90.17
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	88.31
KOG1443	349	consensus Predicted integral membrane protein [Fun	87.94
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	85.36
PRK02237	109	hypothetical protein; Provisional	82.86
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	81.58

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=2.6e-38  Score=296.20  Aligned_cols=298  Identities=41%  Similarity=0.761  Sum_probs=272.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc------chhhHHHHHHHH
Q 016869           17 MALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLG   90 (381)
Q Consensus        17 ~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~g   90 (381)
                      .+|+.++.+++|++++++.++++.+++.+.+.+...|..++++.+....++..++..+|++.      .+++||++++.+
T Consensus         7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla   86 (334)
T PF06027_consen    7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence            57888999999999999999999999999999999999999999999999888877766543      578899999999


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccc--cCCCCCcc
Q 016869           91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEM--AGGGGSRP  168 (381)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~--~~~~~~~~  168 (381)
                      +++..+|++.+.|++|++.++++++.++..+++++++++++|||+++.|++|+++++.|+.++...|...  +...+++.
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~  166 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNP  166 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999888641  22345677


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccc
Q 016869          169 LLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFI  248 (381)
Q Consensus       169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  248 (381)
                      ..|++++++|+++||++++++|+..|+.+..+..++.++++.+++.++.                               
T Consensus       167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~-------------------------------  215 (334)
T PF06027_consen  167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQL-------------------------------  215 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH-------------------------------
Confidence            8999999999999999999999999999999999999999999998776                               


Q ss_pred             cCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHH
Q 016869          249 PLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTY  328 (381)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~  328 (381)
                            ..+|.+++...+|+...+.++++...+.+..|.+....++..+|+...++.++..+++++++++++|+++++..
T Consensus       216 ------~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly  289 (334)
T PF06027_consen  216 ------AILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY  289 (334)
T ss_pred             ------HheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH
Confidence                  66778888888888888888899998899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhheecCCCCCCC
Q 016869          329 YLAFAAVLIGLIIYSTTAKDLLP  351 (381)
Q Consensus       329 ~iG~~lil~G~~l~~~~~~~~~~  351 (381)
                      ++|.++|++|.++|+..+++.++
T Consensus       290 ~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  290 ILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHHHHhheEEccCCcccc
Confidence            99999999999999987765444

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.97  E-value=1.3e-32  Score=238.97  Aligned_cols=294  Identities=42%  Similarity=0.828  Sum_probs=267.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 016869           18 ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN   97 (381)
Q Consensus        18 ~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   97 (381)
                      +||.++++.+|+++++|....+++++.+++.+...|..++|+.+...+++..|+..+|++-.+..|+.+++++++++-+|
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN   92 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN   92 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence            78889999999999999999999999999999999999999999999999999999998878888999999999999999


Q ss_pred             HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-ccCCCCCcchhHHHHHH
Q 016869           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI  176 (381)
Q Consensus        98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~ll~l  176 (381)
                      ++...|++|++..+++.+.+-..+.+.+++|+++|.|.++.|+.|+.+|++|+.++...|-+ ++..++++...|+.+.+
T Consensus        93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999876 55666788899999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST  256 (381)
Q Consensus       177 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (381)
                      +++-+||+.++..+.+.|+.|..+.+++.+++|++++.++.                                      .
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ~--------------------------------------i  214 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQF--------------------------------------I  214 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHHH--------------------------------------h
Confidence            99999999999999999999999999999999999998773                                      4


Q ss_pred             hccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Q 016869          257 LELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVL  336 (381)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil  336 (381)
                      ++.......+|++ ....++.++.++++.|.+....+|..+++...++.++.-+++++.  ..||-+.+|...+.++.+.
T Consensus       215 ~~~~~~~tl~w~~-~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~  291 (336)
T KOG2766|consen  215 FERHHVSTLHWDS-AIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIA  291 (336)
T ss_pred             hhccceeeEeehH-HHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHH
Confidence            4566666677764 345566688899999999999999999999999999999999998  6678889999999999999


Q ss_pred             hhhhheecCCCCCCCC
Q 016869          337 IGLIIYSTTAKDLLPI  352 (381)
Q Consensus       337 ~G~~l~~~~~~~~~~~  352 (381)
                      .|.++|..+++++++.
T Consensus       292 ~GliiYs~re~~~~e~  307 (336)
T KOG2766|consen  292 TGLIIYSTREKDEEEL  307 (336)
T ss_pred             HhhEEeeccccCcHhh
Confidence            9999997666554443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=2.6e-28  Score=233.48  Aligned_cols=281  Identities=14%  Similarity=0.147  Sum_probs=204.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--c-c---hhhHHHHHHHHHHHHHHHHHHH
Q 016869           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--R-L---QVSWYWYLLLGFVDVQGNFLFN  101 (381)
Q Consensus        28 ~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~-~---~~~~~~~~~~g~~~~~~~~~~~  101 (381)
                      ..++=.+.++...+++...+.+ .+|....++|+.+++++++++.+.+++  + .   ++++.++.+.|+++...+.+++
T Consensus        18 ~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~   96 (358)
T PLN00411         18 MLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGY   96 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334444666777777777644 578889999999999999988765422  1 1   3445667777777744466779


Q ss_pred             HHhhccchhhHHHhhcChhHHHHHHHHHH------hcccccHHHHHHHHHHHhhhHHhhcccccc---------------
Q 016869          102 KAFQFTSISSVTLLDCCAIPCAIVFTWVF------LGTRYSVWQLFGASLCVLGLGLMLLSDAEM---------------  160 (381)
Q Consensus       102 ~al~~~~~~~~~il~~~~pi~~~lls~~~------l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~---------------  160 (381)
                      .+++|++++.++++.++.|++++++++++      +|||++++|++|++++++|+.++...+...               
T Consensus        97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~  176 (358)
T PLN00411         97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL  176 (358)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence            99999999999999999999999999999      699999999999999999999887532100               


Q ss_pred             ---cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChh-HHHHHHHHHHHHHHHHHhhcccccccchhcccccccc
Q 016869          161 ---AGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV-EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTS  236 (381)
Q Consensus       161 ---~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  236 (381)
                         +.....+...|+++.++++++||+|++++|+..+++++. ....++...+.+...+..                   
T Consensus       177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~-------------------  237 (358)
T PLN00411        177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIG-------------------  237 (358)
T ss_pred             ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHH-------------------
Confidence               000111124599999999999999999999988887654 334444433333322111                   


Q ss_pred             cccccccccccccCCcccchhcccccc--ccccchh-hHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHH
Q 016869          237 LCGMIKFPFAFIPLPSFRSTLELKSLE--SVKWSTD-IILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAV  313 (381)
Q Consensus       237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~  313 (381)
                                        ...+..+..  ...++.. ..+.+.++. + ..+|.+|++++++.++..+++..+.+|++++
T Consensus       238 ------------------l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~  297 (358)
T PLN00411        238 ------------------LVVEKNNPSVWIIHFDITLITIVTMAII-T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAV  297 (358)
T ss_pred             ------------------HHHccCCcccceeccchHHHHHHHHHHH-H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHH
Confidence                              111111100  0111211 123444543 3 3578999999999999999999999999999


Q ss_pred             HHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          314 ILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       314 i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      +++++++||++++.+++|+++|+.|+.+.++.++|
T Consensus       298 llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        298 VMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999998875544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=1.6e-26  Score=217.30  Aligned_cols=275  Identities=14%  Similarity=0.108  Sum_probs=194.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHH-HHHHHHH
Q 016869           25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKA  103 (381)
Q Consensus        25 ~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~a  103 (381)
                      .....+..++|+.+....|...  +..+|..+.++|+.++++++.++.  ++++.++.+++..+.+.+.... +.+.+.+
T Consensus         6 ~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a   81 (295)
T PRK11689          6 TLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTV--GFPRLRQFPKRYLLAGGLLFVSYEICLALS   81 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHc--cccccccccHHHHHHHhHHHHHHHHHHHHH
Confidence            3445556666776655566544  347999999999999999887653  2222333344455555555444 5555666


Q ss_pred             hhc----cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccccc--C--CCCCcchhHHHHH
Q 016869          104 FQF----TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA--G--GGGSRPLLGDILV  175 (381)
Q Consensus       104 l~~----~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~--~--~~~~~~~~G~ll~  175 (381)
                      +++    .+++.++++.++.|+++.+++++++|||+++++++|+.++++|+.++..++...+  +  .+......|++++
T Consensus        82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~  161 (295)
T PRK11689         82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA  161 (295)
T ss_pred             HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence            654    5667788999999999999999999999999999999999999999886542100  0  0111235699999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccc
Q 016869          176 IAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRS  255 (381)
Q Consensus       176 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  255 (381)
                      ++++++||.|+++.||..++.++.....   ..+.....    +.                                  .
T Consensus       162 l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~----~~----------------------------------~  200 (295)
T PRK11689        162 FIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALW----IK----------------------------------Y  200 (295)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHH----HH----------------------------------H
Confidence            9999999999999999887776654321   12222211    00                                  0


Q ss_pred             hhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869          256 TLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV  335 (381)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~li  335 (381)
                      ..+.......++..+..+.+.+  .+....|.+|++++++.++..++...+.+|+++++++++++||++++.+++|+++|
T Consensus       201 ~~~~~~~~~~~~~~~~~l~~~~--~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI  278 (295)
T PRK11689        201 FLSPQPAMVFSLPAIIKLLLAA--AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMV  278 (295)
T ss_pred             HHhcCccccCCHHHHHHHHHHH--HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence            1111111112233333344444  34567889999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhheecCC
Q 016869          336 LIGLIIYSTTA  346 (381)
Q Consensus       336 l~G~~l~~~~~  346 (381)
                      +.|+++....+
T Consensus       279 ~~gv~~~~~~~  289 (295)
T PRK11689        279 TAGSLLCWLAT  289 (295)
T ss_pred             HHhHHHHhhhH
Confidence            99998886644

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=5.8e-26  Score=213.24  Aligned_cols=272  Identities=13%  Similarity=0.093  Sum_probs=202.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--cchhhHHHHHHHHHHHHHH-HHHHHHHh
Q 016869           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RLQVSWYWYLLLGFVDVQG-NFLFNKAF  104 (381)
Q Consensus        28 ~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~g~~~~~~-~~~~~~al  104 (381)
                      -.+..++|+......|...+  ..+|...+++|+.+++++++++...+++  +.+++++.....|.+.... +.+++.+.
T Consensus        13 ~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   90 (292)
T PRK11272         13 LFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAE   90 (292)
T ss_pred             HHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445556666666665543  5789999999999999998887665443  2355666777778776543 66678888


Q ss_pred             -hccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHH
Q 016869          105 -QFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFA  183 (381)
Q Consensus       105 -~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a  183 (381)
                       ++++++.++++.++.|+++++++++ +|||+++++++|+.++++|+.++..++.      .+....|++++++++++||
T Consensus        91 ~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~------~~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         91 HQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN------LSGNPWGAILILIASASWA  163 (292)
T ss_pred             HccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc------cccchHHHHHHHHHHHHHH
Confidence             9999999999999999999999985 6999999999999999999998865421      1234579999999999999


Q ss_pred             HHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccc
Q 016869          184 MSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLE  263 (381)
Q Consensus       184 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  263 (381)
                      .|.+..||..++. +.....++...+........                                     ...+.....
T Consensus       164 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~  205 (292)
T PRK11272        164 FGSVWSSRLPLPV-GMMAGAAEMLAAGVVLLIAS-------------------------------------LLSGERLTA  205 (292)
T ss_pred             HHHHHHHhcCCCc-chHHHHHHHHHHHHHHHHHH-------------------------------------HHcCCcccc
Confidence            9999999975443 33344444444444432111                                     000100000


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhee
Q 016869          264 SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  343 (381)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~  343 (381)
                      ..+...+..+.+++... ....|.+|++++++.++..++.....+|+++++++++++||++++.+++|+.+++.|+++.+
T Consensus       206 ~~~~~~~~~i~~l~i~~-s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        206 LPTLSGFLALGYLAVFG-SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             cCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            11223344555666655 45667999999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCC
Q 016869          344 TTAK  347 (381)
Q Consensus       344 ~~~~  347 (381)
                      ..++
T Consensus       285 ~~~~  288 (292)
T PRK11272        285 LGKY  288 (292)
T ss_pred             HHHh
Confidence            6443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=5.7e-26  Score=214.00  Aligned_cols=281  Identities=18%  Similarity=0.207  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH-HHHHHHhh
Q 016869           27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN-FLFNKAFQ  105 (381)
Q Consensus        27 ~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~al~  105 (381)
                      ...+.+++|+.+....+...+  ..+|....++|+.++++.++++..++    |.+++.....|++....+ .+++.+++
T Consensus         8 ~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~   81 (299)
T PRK11453          8 LALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAIN   81 (299)
T ss_pred             HHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            355667778888878876553  47899999999999887766544222    223444444555544443 34577888


Q ss_pred             c-cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHH
Q 016869          106 F-TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAM  184 (381)
Q Consensus       106 ~-~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~  184 (381)
                      + .+++.++++.++.|+++.+++++++|||+++++++++.++++|+.++..++.    +..+.+..|++++++++++|++
T Consensus        82 ~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~----~~~~~~~~G~~l~l~aal~~a~  157 (299)
T PRK11453         82 FGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL----NGQHVAMLGFMLTLAAAFSWAC  157 (299)
T ss_pred             hcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC----CCcchhHHHHHHHHHHHHHHHH
Confidence            7 5778999999999999999999999999999999999999999999886432    1222335799999999999999


Q ss_pred             HHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccc
Q 016869          185 SYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLES  264 (381)
Q Consensus       185 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  264 (381)
                      |.+++|+..++.+......... +...+..+   |+......                    ..  +   ......+...
T Consensus       158 ~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~--------------------~~--~---~~~~~~~~~~  208 (299)
T PRK11453        158 GNIFNKKIMSHSTRPAVMSLVV-WSALIPII---PFFVASLI--------------------LD--G---SATMIHSLVT  208 (299)
T ss_pred             HHHHHHHHhcccCccchhHHHH-HHHHHHHH---HHHHHHHH--------------------hc--C---chhhhhhhcc
Confidence            9999999876554333332221 22222211   11000000                    00  0   0000011112


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869          265 VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  344 (381)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~  344 (381)
                      .++..+..+++++... +...|.+|++++++.++..++....++|+++.+++++++||++++.+++|++++++|+++..+
T Consensus       209 ~~~~~~~~l~~l~i~~-t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        209 IDMTTILSLMYLAFVA-TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            2334455566777666 566779999999999999999999999999999999999999999999999999999998876


Q ss_pred             CCC
Q 016869          345 TAK  347 (381)
Q Consensus       345 ~~~  347 (381)
                      .++
T Consensus       288 ~~~  290 (299)
T PRK11453        288 GLR  290 (299)
T ss_pred             chh
Confidence            554

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.95  E-value=3.6e-26  Score=215.80  Aligned_cols=271  Identities=12%  Similarity=0.109  Sum_probs=199.5

Q ss_pred             HHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH---hhh-ccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 016869           37 LSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL---YRR-QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSV  112 (381)
Q Consensus        37 ~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~  112 (381)
                      ......+.+.+ +..+|...++.|+.++++.+.....   .++ +..++++++++..|++......+.+.+++|++++.+
T Consensus        16 ~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~   94 (302)
T TIGR00817        16 YFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT   94 (302)
T ss_pred             HHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            33445555554 4678999999999988877655421   112 223567888999999987778888999999999999


Q ss_pred             HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 016869          113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFL  192 (381)
Q Consensus       113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~  192 (381)
                      +++.++.|+++++++++++|||+++++++|+.++++|+++....+       .+....|++++++++++|++|.++.||.
T Consensus        95 ~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~  167 (302)
T TIGR00817        95 HTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKA  167 (302)
T ss_pred             HHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999998764332       2344679999999999999999999998


Q ss_pred             hc--cCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccccc--ccc
Q 016869          193 VK--KIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESV--KWS  268 (381)
Q Consensus       193 ~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~  268 (381)
                      .+  +.|+.+...++...+.+......                             .....   ......+....  .+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~p~~-----------------------------~~~~~---~~~~~~~~~~~~~~~~  215 (302)
T TIGR00817       168 MTIKSLDKTNLYAYISIMSLFLLSPPA-----------------------------FITEG---PPFLPHGFMQAISGVN  215 (302)
T ss_pred             hccCCCCcccHHHHHHHHHHHHHHHHH-----------------------------HHHcc---hHHHHHHHHHhhcccC
Confidence            88  67888888887766666543221                             00000   00000000000  001


Q ss_pred             h-hhHH-HHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          269 T-DIIL-SFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       269 ~-~~~~-~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      . ..+. .......+....+.+++.++++.++.++++....+|+++++++++++||++|+.+++|+++++.|+.++++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            1 1111 1111111233344566789999999999999999999999999999999999999999999999999998754


Q ss_pred             C
Q 016869          347 K  347 (381)
Q Consensus       347 ~  347 (381)
                      +
T Consensus       296 ~  296 (302)
T TIGR00817       296 A  296 (302)
T ss_pred             c
Confidence            3

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=6.7e-25  Score=206.07  Aligned_cols=274  Identities=15%  Similarity=0.106  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-cchhhHHHHHHHHHHHHHHHHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-RLQVSWYWYLLLGFVDVQGNFLF  100 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~  100 (381)
                      .+++.+..+..++++..+.+.+...+  ..+|....++|+++++++++++...+++ ..+++++.....|.+....+.++
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   88 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLF   88 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            56667777777778877777776665  3789999999999999988876543332 23566777778888777778888


Q ss_pred             HHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHH
Q 016869          101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAI  180 (381)
Q Consensus       101 ~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~  180 (381)
                      ++++++++++.+.++..+.|+++.+++    +||+++.  .++.++++|+.++...+.    +.++.+..|+++++++++
T Consensus        89 ~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~----~~~~~~~~G~ll~l~aa~  158 (293)
T PRK10532         89 YLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ----DVSHVDLTGAALALGAGA  158 (293)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC----CcccCChHHHHHHHHHHH
Confidence            999999999999999999999998876    3665544  456778999988764321    122334679999999999


Q ss_pred             HHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccc
Q 016869          181 FFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELK  260 (381)
Q Consensus       181 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  260 (381)
                      +||.|.+..||..++.++... .+..+.+.++..    |+                                  ...+..
T Consensus       159 ~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~----~~----------------------------------~~~~~~  199 (293)
T PRK10532        159 CWAIYILSGQRAGAEHGPATV-AIGSLIAALIFV----PI----------------------------------GALQAG  199 (293)
T ss_pred             HHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHH----HH----------------------------------HHHccC
Confidence            999999999998877776554 333334433322    21                                  111111


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhh
Q 016869          261 SLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLI  340 (381)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~  340 (381)
                      . ...++..+....++++.. +...|.++++++++.++..+++..+++|+++.+++++++||++++.+++|+++|+.|.+
T Consensus       200 ~-~~~~~~~~~~~l~lgv~~-t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~  277 (293)
T PRK10532        200 E-ALWHWSILPLGLAVAILS-TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASM  277 (293)
T ss_pred             c-ccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            0 011222233345666655 56677999999999999999999999999999999999999999999999999999999


Q ss_pred             heecCCCC
Q 016869          341 IYSTTAKD  348 (381)
Q Consensus       341 l~~~~~~~  348 (381)
                      .+....+|
T Consensus       278 ~~~~~~~~  285 (293)
T PRK10532        278 GSTLTIRR  285 (293)
T ss_pred             HHHhcCCC
Confidence            99766543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=6.8e-25  Score=202.50  Aligned_cols=255  Identities=17%  Similarity=0.082  Sum_probs=193.8

Q ss_pred             HHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHH-HHHHHHHhhccchhhHHH
Q 016869           36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQFTSISSVTL  114 (381)
Q Consensus        36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~i  114 (381)
                      +.++...+...+ +..+|....+.|.+.+.+.+.+...++  +.++++++....|.++... +.+++.|+++++++.+++
T Consensus         2 g~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         2 GTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             cchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            344455555443 456888889999888888877765444  3456667777777777655 677799999999999999


Q ss_pred             hhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869          115 LDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK  194 (381)
Q Consensus       115 l~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~  194 (381)
                      +.++.|+++++++++++|||+++++++|+.++++|+.++..++      ..+.+..|++++++++++|+.+.+..|+..+
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~------~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~  152 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG------NLSINPAGLLLGLGSGISFALGTVLYKRLVK  152 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC------cccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence            9999999999999999999999999999999999999987553      2234568999999999999999999999887


Q ss_pred             cCChh--HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhH
Q 016869          195 KIDRV--EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDII  272 (381)
Q Consensus       195 ~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (381)
                      +.++.  ....+....+.++.....                                      ....+.. ..+...+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~--------------------------------------~~~~~~~-~~~~~~~~~  193 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLLLPFA--------------------------------------WFLGPNP-QALSLQWGA  193 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHH--------------------------------------HhcCCCC-CcchHHHHH
Confidence            76643  333334444444432111                                      1111111 112222333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869          273 LSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL  339 (381)
Q Consensus       273 ~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~  339 (381)
                      +.+.+... ...+|.++++++++.++..++....++|+++.+++++++||++++.+++|.++++.|+
T Consensus       194 ~~~~~~~~-~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       194 LLYLGLIG-TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            44555544 5567799999999999999999999999999999999999999999999999999886

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=1.2e-24  Score=204.71  Aligned_cols=274  Identities=16%  Similarity=0.099  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--cc---hhhHHH--HHHHHHH
Q 016869           20 RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RL---QVSWYW--YLLLGFV   92 (381)
Q Consensus        20 ~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~---~~~~~~--~~~~g~~   92 (381)
                      ++.++.....+.+++|+..+...+...   ..+|....++|.+++.++++++...+++  +.   .++++.  ....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLIY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            446788888888888988888887542   3789999999999998877776543321  10   111222  2334545


Q ss_pred             HHH-HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhH
Q 016869           93 DVQ-GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLG  171 (381)
Q Consensus        93 ~~~-~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G  171 (381)
                      ... .+.++++|+++++++.++++.++.|+++++++++++|||+++++|.|+.++++|+.++..++.       +.    
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~----  150 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL----  150 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc----
Confidence            444 477789999999999999999999999999999999999999999999999999999875421       11    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP  251 (381)
Q Consensus       172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (381)
                      .+++++++++||.|.+..|+..++... . ......+...+......++                         ..    
T Consensus       151 ~~~~l~aa~~~a~~~i~~r~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-------------------------~~----  199 (296)
T PRK15430        151 PIIALGLAFSFAFYGLVRKKIAVEAQT-G-MLIETMWLLPVAAIYLFAI-------------------------AD----  199 (296)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCCCch-h-HHHHHHHHHHHHHHHHHHH-------------------------cc----
Confidence            146888999999999999986432221 1 1111112222211111000                         00    


Q ss_pred             cccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHH
Q 016869          252 SFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLA  331 (381)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG  331 (381)
                         ..  .......++..+..+...+ . +....|.+|++++++.++..++...+.+|+++.+++++++||++++.+++|
T Consensus       200 ---~~--~~~~~~~~~~~~~~~~~~g-~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G  272 (296)
T PRK15430        200 ---SS--TSHMGQNPMSLNLLLIAAG-I-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVT  272 (296)
T ss_pred             ---CC--cccccCCcHHHHHHHHHHH-H-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence               00  0000011111111222223 2 355677999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhheecC
Q 016869          332 FAAVLIGLIIYSTT  345 (381)
Q Consensus       332 ~~lil~G~~l~~~~  345 (381)
                      +++|+.|+.+....
T Consensus       273 ~~lI~~~~~v~~~~  286 (296)
T PRK15430        273 FAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99998887777653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.94  E-value=4.6e-24  Score=204.76  Aligned_cols=286  Identities=15%  Similarity=0.098  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--h-hcc---chhhHHHHHHHHHHHH
Q 016869           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--R-RQR---LQVSWYWYLLLGFVDV   94 (381)
Q Consensus        21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~-~~~---~~~~~~~~~~~g~~~~   94 (381)
                      .++........-.+.......++.+.+ ....|..++.+|+++++++...+...  + +++   .+++++..+..|+++.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            455555555554445455555565553 33339999999999997765444322  1 122   2356788899999998


Q ss_pred             HHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHH
Q 016869           95 QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDIL  174 (381)
Q Consensus        95 ~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll  174 (381)
                      ..+...+.|+++++++.++++.++.|+++++++++++|||++++++.++++++.|+.+....+.       +.+..|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~G~~~  198 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWLAFWC  198 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHHHHHH
Confidence            8877788999999999999999999999999999999999999999999999999999876532       345689999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCC-------hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869          175 VIAGAIFFAMSYVGEEFLVKKID-------RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF  247 (381)
Q Consensus       175 ~l~a~~~~a~~~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~  247 (381)
                      +++|++++|+++++.|+..++.+       ..+...+....+.++..    |+....                       
T Consensus       199 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----p~~~~~-----------------------  251 (350)
T PTZ00343        199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISL----PLVLFF-----------------------  251 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHH----HHHHHH-----------------------
Confidence            99999999999999999877543       33333333444444432    331100                       


Q ss_pred             ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHH----hhhhcchhhHHHHHhHHHHHHHHHHHHHhhccc
Q 016869          248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP----FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQ  323 (381)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~  323 (381)
                       +.+......+.. ...........+.+ .... ....|.+++    .++++.++.+.++...++|+++++.+++++||+
T Consensus       252 -e~~~~~~~~~~~-~~~~~~~~~~~~l~-~i~~-s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~  327 (350)
T PTZ00343        252 -EGKKWVPVWTNY-TANMTNYTKGIIIF-KIFF-SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQ  327 (350)
T ss_pred             -hhHHHHHHHHHh-hhcccccchHHHHH-HHHH-HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCC
Confidence             000000000000 00111111111222 2222 344556666    599999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHhhhhheecC
Q 016869          324 VNWTYYLAFAAVLIGLIIYSTT  345 (381)
Q Consensus       324 ~t~~~~iG~~lil~G~~l~~~~  345 (381)
                      +|+.+++|.++++.|+++|+..
T Consensus       328 lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        328 VTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             CchHhHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999864

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.91  E-value=1e-22  Score=190.23  Aligned_cols=272  Identities=16%  Similarity=0.128  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--h---ccchhhHHHHHHHHH-HHHHHHH
Q 016869           25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR--R---QRLQVSWYWYLLLGF-VDVQGNF   98 (381)
Q Consensus        25 ~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~---~~~~~~~~~~~~~g~-~~~~~~~   98 (381)
                      +.+..+.+++++.....+|...+.  .++.  .+.+....++.+.|+...+  +   +..+++++.....+. .......
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            455666777777777777655543  2333  4666667777777766543  1   222333444444444 4455577


Q ss_pred             HHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHH
Q 016869           99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAG  178 (381)
Q Consensus        99 ~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a  178 (381)
                      +.+.++++.+++.++++.++.|+++.+++++++|||+++++|+|+.+++.|+.++..++.      ...+..|+.+++++
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~------~~~~~~g~~~~l~a  152 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF------AQHRRKAYAWALAA  152 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc------cccchhHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999999999876532      12334688899999


Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhc
Q 016869          179 AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLE  258 (381)
Q Consensus       179 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  258 (381)
                      +++|+.|.+..|+..++.++.........++......   |+...                      .        ...+
T Consensus       153 al~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------------~--------~~~~  199 (281)
T TIGR03340       153 ALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGW---PFLLL----------------------Y--------LKRH  199 (281)
T ss_pred             HHHHHHhhhhccccccchhcccccHHHHHHHHHHHHH---HHHHH----------------------H--------HHHh
Confidence            9999999998887654444321111111122222100   11000                      0        0001


Q ss_pred             cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhh
Q 016869          259 LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIG  338 (381)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G  338 (381)
                      .......++ ......+.+... ....|.+|++++++.++..++...+.+|+++.+++++++||++++.+++|+++++.|
T Consensus       200 ~~~~~~~~~-~~~~~~~~~~~~-s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~G  277 (281)
T TIGR03340       200 GRSMFPYAR-QILPSATLGGLM-IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAG  277 (281)
T ss_pred             ccchhhhHH-HHHHHHHHHHHH-HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHh
Confidence            111000111 112223444333 566779999999999988888888889999999999999999999999999999999


Q ss_pred             hhh
Q 016869          339 LII  341 (381)
Q Consensus       339 ~~l  341 (381)
                      +.+
T Consensus       278 v~l  280 (281)
T TIGR03340       278 LVV  280 (281)
T ss_pred             HHh
Confidence            875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=1.8e-19  Score=168.24  Aligned_cols=274  Identities=23%  Similarity=0.304  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhh---ccchhhHHHHHHHHHHHHHH-HHH
Q 016869           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG-NFL   99 (381)
Q Consensus        24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~-~~~   99 (381)
                      ......+.++.++......+...+. ..++....+.|.....+...+....++   ++.+.++++..+.+.+.... ..+
T Consensus         8 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (292)
T COG0697           8 GLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLL   86 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            3344444445555555454444432 345566667798888887544433322   22223334555555555555 777


Q ss_pred             HHHHhhccchhhHHHhhcChhHHHHHHHH-HHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCc-chhHHHHHHH
Q 016869          100 FNKAFQFTSISSVTLLDCCAIPCAIVFTW-VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSR-PLLGDILVIA  177 (381)
Q Consensus       100 ~~~al~~~~~~~~~il~~~~pi~~~lls~-~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~-~~~G~ll~l~  177 (381)
                      ++.++++++++.++++.++.|+++.++++ +++|||++++++.++.++++|+.++..++.     .++. ...|++++++
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~-----~~~~~~~~g~~~~l~  161 (292)
T COG0697          87 LFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG-----GGGILSLLGLLLALA  161 (292)
T ss_pred             HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC-----cchhHHHHHHHHHHH
Confidence            79999999999999999999999999997 777999999999999999999999998753     1111 5789999999


Q ss_pred             HHHHHHHHHHHHHHhhccCChhHHHH-HHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869          178 GAIFFAMSYVGEEFLVKKIDRVEVVC-MIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST  256 (381)
Q Consensus       178 a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (381)
                      +++++|++.+..|+.. +.+...... +... .......   |.                                   .
T Consensus       162 a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~---~~-----------------------------------~  201 (292)
T COG0697         162 AALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLL---LF-----------------------------------F  201 (292)
T ss_pred             HHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHH---HH-----------------------------------H
Confidence            9999999999999987 555544444 3222 1111110   10                                   0


Q ss_pred             hccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Q 016869          257 LELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVL  336 (381)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil  336 (381)
                      ....+ .......+....+.++.. ....|.++.+++++.++...+.....+|+++.+++++++||+++..+++|+.+++
T Consensus       202 ~~~~~-~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~  279 (292)
T COG0697         202 LSGFG-APILSRAWLLLLYLGVFS-TGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVV  279 (292)
T ss_pred             hcccc-ccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence            01111 111222333444555554 3357799999999999999998889999999999999999999999999999999


Q ss_pred             hhhhheecC
Q 016869          337 IGLIIYSTT  345 (381)
Q Consensus       337 ~G~~l~~~~  345 (381)
                      .|+.+.+..
T Consensus       280 ~g~~l~~~~  288 (292)
T COG0697         280 LGVLLASLR  288 (292)
T ss_pred             HHHHHHhcc
Confidence            999998876

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.87  E-value=1e-19  Score=171.75  Aligned_cols=276  Identities=17%  Similarity=0.210  Sum_probs=211.8

Q ss_pred             HHHHHhhcCCC--chhHHHHHHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhh
Q 016869           41 TTAVITDLGVD--APITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD  116 (381)
Q Consensus        41 ~~~~l~~~~~~--~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~  116 (381)
                      ..-.+.+....  .|..+++..+....+.-.+.....  +++.+.+++.+...+++....+.+.+.|+.|+|.....+.+
T Consensus        18 ~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~k   97 (303)
T PF08449_consen   18 LQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFK   97 (303)
T ss_pred             HHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHh
Confidence            33344444433  489999999888887766554433  34557888999999999999999999999999999999999


Q ss_pred             cChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC---CcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 016869          117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG---SRPLLGDILVIAGAIFFAMSYVGEEFLV  193 (381)
Q Consensus       117 ~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~---~~~~~G~ll~l~a~~~~a~~~v~~~~~~  193 (381)
                      ++.|+.+++++.+++|||.+++|++++++..+|+++....|...+....   .....|+++.+++.++.|...+++||..
T Consensus        98 s~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~  177 (303)
T PF08449_consen   98 SSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLF  177 (303)
T ss_pred             hhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999887653111111   1123499999999999999999999998


Q ss_pred             ccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhh
Q 016869          194 KKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDI  271 (381)
Q Consensus       194 ~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (381)
                      +++  ++.+.+.+..+++..+.......+.     ++                          ...+..++..  .....
T Consensus       178 ~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-----~~--------------------------~~~~~~~f~~--~~p~~  224 (303)
T PF08449_consen  178 KKYGKSPWELMFYTNLFSLPFLLILLFLLP-----TG--------------------------EFRSAIRFIS--AHPSV  224 (303)
T ss_pred             HHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-----hh--------------------------HhhHHHHHHH--HhHHH
Confidence            766  4567888888888887654431100     00                          0111111111  11223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          272 ILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       272 ~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      +...+....+...++..++..+++.++...++....+.+.+++++.+++|+++++.+|+|.++++.|..+++..++|+
T Consensus       225 ~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  225 LLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            334455555566677788889999999999999999999999999999999999999999999999999999877664

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=99.87  E-value=2.5e-19  Score=165.14  Aligned_cols=242  Identities=15%  Similarity=0.045  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc------cc----hhh-HHHHHHHHH
Q 016869           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ------RL----QVS-WYWYLLLGF   91 (381)
Q Consensus        23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~~----~~~-~~~~~~~g~   91 (381)
                      +++....+.+++|+..+.+.+.+.   ..+|....++|.++++++++++...+++      +.    +++ +......|.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            356667777788888888888632   3799999999999999887765532211      11    111 223455666


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhH
Q 016869           92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLG  171 (381)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G  171 (381)
                      +....+.+++.|++++++++++++.++.|+++++++++++|||+++++|+++.++++|++++..++.       +..   
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~~---  148 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SLP---  148 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cch---
Confidence            6566678889999999999999999999999999999999999999999999999999998865421       111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP  251 (381)
Q Consensus       172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (381)
                       .++++++++||.|.+..|+..++ +..+.... .+..........                                  
T Consensus       149 -~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~----------------------------------  191 (256)
T TIGR00688       149 -WEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYL----------------------------------  191 (256)
T ss_pred             -HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHH----------------------------------
Confidence             46789999999999999987543 32221111 111111111000                                  


Q ss_pred             cccchhcccccccccc-chhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHh
Q 016869          252 SFRSTLELKSLESVKW-STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFC  319 (381)
Q Consensus       252 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~  319 (381)
                         ...+.......+. ..+.++...+. . ....|.++++++++.++..++...+.+|+++++++.++
T Consensus       192 ---~~~~~~~~~~~~~~~~~~~l~~~g~-~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       192 ---LQTDFATVQQTNPFPIWLLLVLAGL-I-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ---HHhccCcccccCchhHHHHHHHHHH-H-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence               0000000011111 13444445554 3 45688999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.82  E-value=1.3e-21  Score=171.77  Aligned_cols=271  Identities=15%  Similarity=0.268  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccc---hhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 016869           33 FSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL---QVSWYWYLLLGFVDVQGNFLFNKAFQFTSI  109 (381)
Q Consensus        33 ~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~  109 (381)
                      +++..+.+.++....   .+|..+...|++.--++..|..+++++..   +...+++++.|+.+..+.++.|+|+.|.+.
T Consensus        47 ~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~msl  123 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSL  123 (346)
T ss_pred             HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcch
Confidence            444455555544443   46888888886665555555444443321   233345677899999999999999999999


Q ss_pred             hhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-c-----cCCCC-CcchhHHHHHHHHHHHH
Q 016869          110 SSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-M-----AGGGG-SRPLLGDILVIAGAIFF  182 (381)
Q Consensus       110 ~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~-----~~~~~-~~~~~G~ll~l~a~~~~  182 (381)
                      +++.++..++|+++.+++|+++|||.++.+.++..+.+.|++++..++.. +     ++..+ ..+..|...++.++++.
T Consensus       124 aDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~  203 (346)
T KOG4510|consen  124 ADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFG  203 (346)
T ss_pred             hheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhh
Confidence            99999999999999999999999999999999999999999999887653 1     11111 34567889999999999


Q ss_pred             HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccc
Q 016869          183 AMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSL  262 (381)
Q Consensus       183 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  262 (381)
                      |.-.++.|+..|+.|......+....+.+.+.+...-                       +           +.+     
T Consensus       204 asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~-----------------------i-----------g~~-----  244 (346)
T KOG4510|consen  204 ASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCAS-----------------------I-----------GAV-----  244 (346)
T ss_pred             hhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhh-----------------------c-----------cce-----
Confidence            9999999999999988766666666666665433200                       0           101     


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869          263 ESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  342 (381)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~  342 (381)
                       +.+.....+.+++-.+...+.+|.+...+++.--+.-.++..++..+++.+|.+++|||.||++.|.|+++|+.+.+..
T Consensus       245 -~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  245 -QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             -ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence             1222334444444445556788899999999987887888888888999999999999999999999999998887776


Q ss_pred             ecCC
Q 016869          343 STTA  346 (381)
Q Consensus       343 ~~~~  346 (381)
                      ...+
T Consensus       324 a~~k  327 (346)
T KOG4510|consen  324 ALKK  327 (346)
T ss_pred             HHHH
Confidence            6543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.81  E-value=2.8e-18  Score=151.77  Aligned_cols=272  Identities=24%  Similarity=0.298  Sum_probs=205.8

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhhc---------------cc--hhhHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q 016869           49 GVDAPITQSVLCYLSLALAYGGILLYRRQ---------------RL--QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISS  111 (381)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---------------~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  111 (381)
                      ++.+|+.++..-++.-.+.+..+.+.|++               +.  +......+..++++..+..+.|.++.+++++.
T Consensus        35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs  114 (372)
T KOG3912|consen   35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS  114 (372)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence            47789999888777665655554444432               01  22234556689999999999999999999999


Q ss_pred             HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccccc---CCCCCcchhHHHHHHHHHHHHHHHHHH
Q 016869          112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA---GGGGSRPLLGDILVIAGAIFFAMSYVG  188 (381)
Q Consensus       112 ~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~---~~~~~~~~~G~ll~l~a~~~~a~~~v~  188 (381)
                      .++++....+|+.+++..+++++++.+||+|+.....|++.+...|.+..   .+..++...|+++.+.+-+.-|...++
T Consensus       115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999988776522   122356679999999999999999999


Q ss_pred             HHHhhccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC-c----ccchhcc--
Q 016869          189 EEFLVKKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP-S----FRSTLEL--  259 (381)
Q Consensus       189 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~----~~~~~~~--  259 (381)
                      .+|..++.  ++.+..++.+++|..+...+.                         .|++++|.+ +    +++.+|.  
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~-------------------------i~m~yi~~~~sfS~~~~g~~eD~~  249 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLA-------------------------IPMYYIPSGDSFSCNPRGVLEDWG  249 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHH-------------------------HHHhheecCCcCcCCCCcchhhHH
Confidence            99998876  567999999999987765544                         455555544 2    1233333  


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869          260 KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL  339 (381)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~  339 (381)
                      +.+.+.+......+...+...+...++..-....|..++++-.+.-.....+--+++..+.+|.+...|+.|+++.+.|+
T Consensus       250 ~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi  329 (372)
T KOG3912|consen  250 DAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGI  329 (372)
T ss_pred             HHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22333443444445556666655555555555566678877777777776777778888889999999999999999999


Q ss_pred             hheecC
Q 016869          340 IIYSTT  345 (381)
Q Consensus       340 ~l~~~~  345 (381)
                      ++|+--
T Consensus       330 ~lY~~i  335 (372)
T KOG3912|consen  330 ILYNQI  335 (372)
T ss_pred             HHHHHH
Confidence            999853

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.79  E-value=6.8e-18  Score=155.32  Aligned_cols=301  Identities=18%  Similarity=0.209  Sum_probs=217.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchhHHHHHHHHHHHHHHHHHH-------H--hh--hc-----
Q 016869           15 SQMALRTLYLLLLGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGIL-------L--YR--RQ-----   77 (381)
Q Consensus        15 ~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~-~~~~~p~~~~~~r~~~~~l~l~~~~-------~--~~--~~-----   77 (381)
                      ..+++|...|+++-.++..+|-.++..++.+.. +.+..|+..++..-....+-+.++.       .  .|  +.     
T Consensus         6 ~~~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~   85 (416)
T KOG2765|consen    6 FTKRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIM   85 (416)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhh
Confidence            345566678888888888999988888875554 3455799888777543333333322       1  11  00     


Q ss_pred             --------------------------------------------------------cch------------hhHHHHHHH
Q 016869           78 --------------------------------------------------------RLQ------------VSWYWYLLL   89 (381)
Q Consensus        78 --------------------------------------------------------~~~------------~~~~~~~~~   89 (381)
                                                                              +.+            +..+.-+..
T Consensus        86 ~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~f  165 (416)
T KOG2765|consen   86 EEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFF  165 (416)
T ss_pred             hhhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHH
Confidence                                                                    000            111233555


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc-ccCCCCCcc
Q 016869           90 GFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRP  168 (381)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~  168 (381)
                      ..+.+.+|++++.|+.+++++..+++.+++-+||..++.++..||+++.+.+++.+.+.|++++...|.+ .+.......
T Consensus       166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~  245 (416)
T KOG2765|consen  166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP  245 (416)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence            6667778999999999999999999999999999999999999999999999999999999999988754 222344556


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869          169 LLGDILVIAGAIFFAMSYVGEEFLVKKI-DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF  247 (381)
Q Consensus       169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~  247 (381)
                      ..|+++++++++.||+|.++.||...+. +...+..+.++.|.+-..+...|++++                        
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL------------------------  301 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL------------------------  301 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH------------------------
Confidence            8999999999999999999999988777 355555555544444333323222222                        


Q ss_pred             ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH
Q 016869          248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT  327 (381)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~  327 (381)
                             ..+..+.++-.+......+++.+... .+..-.+|.++.-..++.++.+.+.++...+++.+.++-|.++++.
T Consensus       302 -------~~~~~e~F~lP~~~q~~~vv~~~lig-tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~  373 (416)
T KOG2765|consen  302 -------DFFGEERFELPSSTQFSLVVFNNLIG-TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL  373 (416)
T ss_pred             -------HHhccCcccCCCCceeEeeeHhhHHH-HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH
Confidence                   22222222222222222344555444 5555589999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHhhhhheecCCC
Q 016869          328 YYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       328 ~~iG~~lil~G~~l~~~~~~  347 (381)
                      +++|.+.|..|.+..+...+
T Consensus       374 ~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  374 YIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHhheecccc
Confidence            99999999999999998654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.78  E-value=8.8e-17  Score=150.56  Aligned_cols=273  Identities=14%  Similarity=0.087  Sum_probs=189.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhcc--chhhHHHHHHHHHHHHHHHHHH
Q 016869           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQR--LQVSWYWYLLLGFVDVQGNFLF  100 (381)
Q Consensus        24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~--~~~~~~~~~~~g~~~~~~~~~~  100 (381)
                      ++.+..+.+++|+..+...+.+.  + .++.+..  |..++.+++..+.. .++++  .++.+..-++.|.....+|.++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g-~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~   76 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--G-GPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ   76 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--C-CHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence            34566677777888887777655  3 3443332  66666666554433 23221  1233344455566666778999


Q ss_pred             HHHhhccchhhHHHhhc-ChhHHHHHHHHHHhcccccHHH----HHHHHHHHhhhHHhhcccccccCCCC-CcchhHHHH
Q 016869          101 NKAFQFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAEMAGGGG-SRPLLGDIL  174 (381)
Q Consensus       101 ~~al~~~~~~~~~il~~-~~pi~~~lls~~~l~er~~~~~----~~gi~l~~~Gv~l~~~~~~~~~~~~~-~~~~~G~ll  174 (381)
                      +.+.++.+++.+..+.+ +.+++..+++.+++|||.++++    ++|+.++++|+.++...+....++.+ .+...|.++
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~  156 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL  156 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence            99999999999988888 8889999999999999999999    99999999999988665431111000 223679999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCccc
Q 016869          175 VIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFR  254 (381)
Q Consensus       175 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  254 (381)
                      +++++++|+.|.+..|+.  +.++.+....+. ++.++......+.                                  
T Consensus       157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~-~g~~~~~~~~~~~----------------------------------  199 (290)
T TIGR00776       157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQA-IGMVIGGIIFNLG----------------------------------  199 (290)
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCcceehhHHH-HHHHHHHHHHHHH----------------------------------
Confidence            999999999999999976  467766654444 3333332221010                                  


Q ss_pred             chhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhh-cchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH----
Q 016869          255 STLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK-LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY----  329 (381)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~----  329 (381)
                      . .+.++.   . ....+...+ .+......|.+|..+.+ +.++..++.....+|+.+.+++++++||+.++.|+    
T Consensus       200 ~-~~~~~~---~-~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~  273 (290)
T TIGR00776       200 H-ILAKPL---K-KYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAIS  273 (290)
T ss_pred             H-hcccch---H-HHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhH
Confidence            0 000111   1 111122222 22224677788999999 89999999999999999999999999999999999    


Q ss_pred             HHHHHHHhhhhheec
Q 016869          330 LAFAAVLIGLIIYST  344 (381)
Q Consensus       330 iG~~lil~G~~l~~~  344 (381)
                      +|+++++.|..+...
T Consensus       274 iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       274 VGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.78  E-value=3.2e-16  Score=137.20  Aligned_cols=256  Identities=17%  Similarity=0.116  Sum_probs=188.9

Q ss_pred             HHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcCh
Q 016869           41 TTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCA  119 (381)
Q Consensus        41 ~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~  119 (381)
                      +++-+.  ....|...+.+|..+++++++++.. +|++..+++|+.....|......|.++|.++..+|.+.+.-+-++.
T Consensus        30 ~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~G  107 (292)
T COG5006          30 FAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTG  107 (292)
T ss_pred             HHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhcc
Confidence            444444  2356888999999999999988665 4445567889999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChh
Q 016869          120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV  199 (381)
Q Consensus       120 pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~  199 (381)
                      |+.+++++    .+|  .+..+.+.+++.|+.++...+.    +.++.+..|..+++.++.||+.|.+..||..+..+..
T Consensus       108 PL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~  177 (292)
T COG5006         108 PLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQ----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGT  177 (292)
T ss_pred             HHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccC----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCc
Confidence            98876655    333  3455667778888888876643    4567788999999999999999999999987655544


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHH
Q 016869          200 EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNA  279 (381)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (381)
                      +....    +..+..+..+|+                                  +..+... .-..++.....+.+++ 
T Consensus       178 ~g~a~----gm~vAaviv~Pi----------------------------------g~~~ag~-~l~~p~ll~laLgvav-  217 (292)
T COG5006         178 AGVAV----GMLVAALIVLPI----------------------------------GAAQAGP-ALFSPSLLPLALGVAV-  217 (292)
T ss_pred             hHHHH----HHHHHHHHHhhh----------------------------------hhhhcch-hhcChHHHHHHHHHHH-
Confidence            44443    333333333354                                  2222211 0112222222222332 


Q ss_pred             HHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          280 ASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       280 ~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      .++..=|.+-..++++.+...-+..+.++|.++.+.+++++||.+|+.||+|++.|+.+..-.....+|
T Consensus       218 lSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         218 LSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            235567799999999999999999999999999999999999999999999999999887655554443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=1.4e-17  Score=154.68  Aligned_cols=266  Identities=16%  Similarity=0.276  Sum_probs=204.0

Q ss_pred             HHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc---c--chhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcC
Q 016869           44 VITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ---R--LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (381)
Q Consensus        44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~  118 (381)
                      .+.+.++..|...+..+...+.+.+......+-.   +  .+.+++..+.+|++...+.++.+.|+.+.+++..+++..+
T Consensus        39 il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~  118 (316)
T KOG1441|consen   39 ILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKAL  118 (316)
T ss_pred             hhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhh
Confidence            3444488899999999777766666544333221   1  3467899999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcc---
Q 016869          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK---  195 (381)
Q Consensus       119 ~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~---  195 (381)
                      .|+++.++++++.+|+.++..++.+.....|+.+....|.       +.+..|.+.++++.+..++.+++.|+..++   
T Consensus       119 ~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~  191 (316)
T KOG1441|consen  119 MPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFGFISAMISNLAFALRNILSKKLLTSKGE  191 (316)
T ss_pred             cchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            9999999999999999999999999999999999988753       678899999999999999999999998852   


Q ss_pred             -CChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHH
Q 016869          196 -IDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILS  274 (381)
Q Consensus       196 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (381)
                       .|+.+.+.++.-.+.....   .|+                         .....+.   .. . .....+|....+..
T Consensus       192 ~~~~~~ll~y~ap~s~~~Ll---~P~-------------------------~~~~~~~---~~-~-~~~~~~~~~~~~~~  238 (316)
T KOG1441|consen  192 SLNSMNLLYYTAPISLIFLL---IPF-------------------------LDYVEGN---KF-V-GFLTAPWFVTFLIL  238 (316)
T ss_pred             ccCchHHHHHhhhHHHHHHh---cch-------------------------Hhhhccc---ce-e-eeeccccchhhHHH
Confidence             3555555555544444432   132                         2221111   00 0 00111333222222


Q ss_pred             HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869          275 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  350 (381)
Q Consensus       275 ~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~  350 (381)
                      ... ..+.++.|...+..+.+.+|.+-++.....-++.+..++++|+|+.|+.+..|.++.++|+.+|++.+++++
T Consensus       239 ~~~-sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  239 LLN-SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHH-HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            222 255778889999999999999999999988888999999999999999999999999999999998776543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.72  E-value=7.3e-15  Score=132.09  Aligned_cols=270  Identities=16%  Similarity=0.072  Sum_probs=188.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--hhcc---chhhHHHH--HHHHHHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RRQR---LQVSWYWY--LLLGFVDV   94 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~~---~~~~~~~~--~~~g~~~~   94 (381)
                      .+|+..+....++|+..-...+.+..   .++..+...|.+-+..+++.....  +++.   ..++.+.+  ...+....
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~---~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEP---LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            46778888888888888878887775   466778888876555555443332  2221   12222222  33333344


Q ss_pred             HHHHH-HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHH
Q 016869           95 QGNFL-FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDI  173 (381)
Q Consensus        95 ~~~~~-~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~l  173 (381)
                      ..|+. +.+|..+..+-++++=+...|++.++++++++|||+++.||+++.++.+||........       +.+    .
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-------~lp----w  151 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-------SLP----W  151 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-------CCc----H
Confidence            44555 47899999999999999999999999999999999999999999999999999988732       222    4


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcc
Q 016869          174 LVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSF  253 (381)
Q Consensus       174 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (381)
                      .++.=++.|+.|...-|+.  +.|+.+-.....++-.....+..                                    
T Consensus       152 val~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl------------------------------------  193 (293)
T COG2962         152 VALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYL------------------------------------  193 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHH------------------------------------
Confidence            5677789999999976665  44566555555544444443222                                    


Q ss_pred             cchhcc-ccccc-cccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHH
Q 016869          254 RSTLEL-KSLES-VKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLA  331 (381)
Q Consensus       254 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG  331 (381)
                       ...+. .++.. .+++.  +.+....+..+..--.++..+-|+.+-.+.++..+++|..-.+++++++||+++..+...
T Consensus       194 -~~l~~~~~~~~~~~~~~--~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~  270 (293)
T COG2962         194 -LFLADSGQFLQQNANSL--WLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVT  270 (293)
T ss_pred             -HHHhcCchhhhcCCchH--HHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence             11111 11111 12222  233222222233343677888889999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhheecCC
Q 016869          332 FAAVLIGLIIYSTTA  346 (381)
Q Consensus       332 ~~lil~G~~l~~~~~  346 (381)
                      .+.|-+|+.++..+.
T Consensus       271 F~~IW~aL~l~~~d~  285 (293)
T COG2962         271 FAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998754

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.67  E-value=1.5e-14  Score=131.39  Aligned_cols=219  Identities=20%  Similarity=0.185  Sum_probs=163.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc
Q 016869           80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE  159 (381)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~  159 (381)
                      +++..++.+.++++...|.+.+.++.+.+++..+++.++..++|++++++++|+|++++||+++.+.++|+.+...++..
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            45667889999999999999999999999999999999999999999999999999999999999999999998876543


Q ss_pred             cc---CC-------CCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccch
Q 016869          160 MA---GG-------GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMIT  227 (381)
Q Consensus       160 ~~---~~-------~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  227 (381)
                      .+   ..       ...+...|.++.++++++.|+..++.||..|+.+.  ........++|.++..+.. ..       
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~-~~-------  165 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLAL-LL-------  165 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH-hc-------
Confidence            10   01       12345689999999999999999999999998742  3444445667777664332 00       


Q ss_pred             hcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHH
Q 016869          228 FTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLT  307 (381)
Q Consensus       228 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~  307 (381)
                                           ...  +...+.+-+.  .++.+.|..   +......+ .+....+|+.+...-.+....
T Consensus       166 ---------------------~~~--~~~~~~g~f~--G~~~~~~~~---i~~~a~gG-llva~v~KyadnI~K~fa~a~  216 (244)
T PF04142_consen  166 ---------------------SDG--SAISESGFFH--GYSWWVWIV---IFLQAIGG-LLVAFVLKYADNIVKGFATAV  216 (244)
T ss_pred             ---------------------ccc--cccccCCchh--hcchHHHHH---HHHHHHhh-HHHHHHHHHHhHHHHHHHHHH
Confidence                                 000  0111111122  233333322   22222233 556678999999988888888


Q ss_pred             HHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869          308 SDMWAVILRIFCYHQQVNWTYYLAFAAV  335 (381)
Q Consensus       308 ~pv~a~i~~~~~~~e~~t~~~~iG~~li  335 (381)
                      ..+.+.+.++++||.+++....+|..+|
T Consensus       217 siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  217 SIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            8899999999999999999999998754

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.64  E-value=2e-12  Score=119.70  Aligned_cols=231  Identities=16%  Similarity=0.157  Sum_probs=170.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc--
Q 016869           82 SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE--  159 (381)
Q Consensus        82 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~--  159 (381)
                      +..+..+.+++...-|.+.+.++.+.+++..++..++..+.|++++.++++||++++||.++++..+|+.++..+...  
T Consensus        91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            345667778888888888899999999999999999999999999999999999999999999999999999833221  


Q ss_pred             --ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhccccccc
Q 016869          160 --MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYT  235 (381)
Q Consensus       160 --~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  235 (381)
                        .+.....+...|....+.++.+.+...++.||..|+.+.  +.......++|.++..+..                  
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~------------------  232 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI------------------  232 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH------------------
Confidence              112234556799999999999999999999999987643  3333334556777765332                  


Q ss_pred             ccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHH
Q 016869          236 SLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVIL  315 (381)
Q Consensus       236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~  315 (381)
                                 ..-+.+  ...+.+-+  ..|+...|...+..+.   .+ .+....+|+.+...-........+++.+.
T Consensus       233 -----------~~~d~~--~i~~~gff--~G~s~~vw~vVl~~a~---gG-Llvs~v~KyADnIlK~f~~s~aiilt~v~  293 (345)
T KOG2234|consen  233 -----------LLQDGE--AINEYGFF--YGYSSIVWLVVLLNAV---GG-LLVSLVMKYADNILKGFSTSVAIILTTVA  293 (345)
T ss_pred             -----------hhcccc--ccccCCcc--ccccHHHHHHHHHHhc---cc-hhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence                       000000  11111111  2344444444433322   22 45566788888887777777777999999


Q ss_pred             HHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          316 RIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       316 ~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      ++.++|.++|....+|..+|+.++.+|...++++
T Consensus       294 S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  294 SIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            9999999999999999999999999999655543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.61  E-value=2e-14  Score=124.40  Aligned_cols=237  Identities=12%  Similarity=0.123  Sum_probs=187.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccc
Q 016869           79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (381)
Q Consensus        79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~  158 (381)
                      .+.+.+.+...++...+++...|.|++|++.....+=.+..|+-+++++.++.+++.+|++..+++.+++|+++....+.
T Consensus        81 D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen   81 DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence            35667788999999999999999999999998888889999999999999999999999999999999999999998754


Q ss_pred             cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccc
Q 016869          159 EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTS  236 (381)
Q Consensus       159 ~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  236 (381)
                      ............|.++.+++-..-++....+++.++.+.+  ..++....+|+.+.....+       .+++        
T Consensus       161 Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~-------lfTG--------  225 (337)
T KOG1580|consen  161 KVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGL-------LFTG--------  225 (337)
T ss_pred             ccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhh-------eehh--------
Confidence            3222233445689999999999999999999998887644  5777788889998875332       0000        


Q ss_pred             cccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHH
Q 016869          237 LCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILR  316 (381)
Q Consensus       237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~  316 (381)
                                        ..+|.-.+.+-.+  ..+.-..+++++...++++.+..+...++...++...+...++++.+
T Consensus       226 ------------------ElweF~yF~~RhP--~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~S  285 (337)
T KOG1580|consen  226 ------------------ELWEFFYFVQRHP--YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILIS  285 (337)
T ss_pred             ------------------hHHHHHHHHHhcc--HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHH
Confidence                              2222212211111  11222455566677788999999999999999999999999999999


Q ss_pred             HHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869          317 IFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  350 (381)
Q Consensus       317 ~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~  350 (381)
                      +++++++++.+||+|..++..++..-....|+.+
T Consensus       286 Vllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~  319 (337)
T KOG1580|consen  286 VLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAP  319 (337)
T ss_pred             HHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCc
Confidence            9999999999999999999999887776655544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.57  E-value=9.7e-13  Score=118.58  Aligned_cols=264  Identities=14%  Similarity=0.202  Sum_probs=205.9

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhh--ccchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHH
Q 016869           50 VDAPITQSVLCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (381)
Q Consensus        50 ~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls  127 (381)
                      +.+|.++.+.+-+.+.+.-..+.-+++  ...+.+|+.+...++.+....++.+.|++|++-....+-.++..+-++++.
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            567888888888777766543333322  234688999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHhhhHHhhccccc--ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHH
Q 016869          128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE--MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVC  203 (381)
Q Consensus       128 ~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~--~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~  203 (381)
                      .++.|+|.+..+.+...+...|+.+....+..  .+..+..+...|..+....-++-+..+..++++.++.  +..+++.
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            99999999999999999999999988765442  2223345678999999999999999999999998865  5678888


Q ss_pred             HHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccchhhHHHHHHHHHHHH
Q 016869          204 MIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSF  283 (381)
Q Consensus       204 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (381)
                      ...+++.+.+....++=                              .   ...+.-++-..+++.  +.-......+..
T Consensus       208 ~vNLf~~i~~~~~li~q------------------------------g---~~~~av~F~~~hp~~--~~Di~l~s~~ga  252 (327)
T KOG1581|consen  208 GVNLFSAILNGTYLILQ------------------------------G---HLLPAVSFIKEHPDV--AFDILLYSTCGA  252 (327)
T ss_pred             HHHHHHHHHHHHhhhcC------------------------------C---CCchHHHHHHcChhH--HHHHHHHHHhhh
Confidence            88889998876443110                              0   111111121112222  222344445566


Q ss_pred             HHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          284 MFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       284 ~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      .+|.+.++.+++-|+.+-...+.+.-++++.++.+.+|++.++.||.|..++..|+.+-..-+++
T Consensus       253 vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  253 VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            78899999999999999999999999999999999999999999999999999998777665555

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.56  E-value=1.1e-12  Score=118.15  Aligned_cols=298  Identities=15%  Similarity=0.189  Sum_probs=191.1

Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH-hhhc----cchhhH
Q 016869            9 SCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL-YRRQ----RLQVSW   83 (381)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~----~~~~~~   83 (381)
                      ..|..++|...+++..+.+-.+--.++-+..+..+...+ ++.-|...+..+.+.-.++-..... ++++    +....|
T Consensus         2 ~~~~~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~-~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw   80 (349)
T KOG1443|consen    2 GRWALDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK-NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSW   80 (349)
T ss_pred             CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcH
Confidence            357778888887766555543332222222222333333 5777999888887654444332222 2211    223344


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc
Q 016869           84 ----YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE  159 (381)
Q Consensus        84 ----~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~  159 (381)
                          ++....|+....-..+.|+++.|++.+.+++..+++++|+.+++.+|--||+++.-..-+.++.+|+.+....+. 
T Consensus        81 ~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-  159 (349)
T KOG1443|consen   81 RDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-  159 (349)
T ss_pred             HHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-
Confidence                444466666666677779999999999999999999999999999999999999999999999999999988743 


Q ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCC-----hhHHHHHHHHHHHHHHHHHhhcccccccchhcccccc
Q 016869          160 MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID-----RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLY  234 (381)
Q Consensus       160 ~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  234 (381)
                            +.+..|..+..++.++.++...+.++..++.+     +.+......-+-.+...    |.   .++.+      
T Consensus       160 ------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll----~~---~l~fE------  220 (349)
T KOG1443|consen  160 ------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLL----PL---SLLFE------  220 (349)
T ss_pred             ------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHH----HH---HHHHc------
Confidence                  57789999999999999999999998877654     33333222211111111    11   00000      


Q ss_pred             cccccccccccccccCCcccchhcccccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHH
Q 016869          235 TSLCGMIKFPFAFIPLPSFRSTLELKSLESVKW--STDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWA  312 (381)
Q Consensus       235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a  312 (381)
                          |          . .  ...+...+...+.  ..+....+.+.+...+..-..-+..+.+.+..+.++.....-+-+
T Consensus       221 ----G----------~-~--~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~t  283 (349)
T KOG1443|consen  221 ----G----------L-H--LITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCT  283 (349)
T ss_pred             ----c----------c-c--cchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHH
Confidence                0          0 0  0001111111111  111111122222223322234445566688888888888887999


Q ss_pred             HHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869          313 VILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  344 (381)
Q Consensus       313 ~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~  344 (381)
                      .+++..+.+|+++...|+|..++..|+.++..
T Consensus       284 l~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  284 LLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999944

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.39  E-value=1.8e-10  Score=105.38  Aligned_cols=273  Identities=13%  Similarity=0.089  Sum_probs=181.4

Q ss_pred             HHHHHH-HHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh---hc-cchhhHHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 016869           38 SSFTTA-VITDLGVDAPITQSVLCYLSLALAYGGILLYR---RQ-RLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSV  112 (381)
Q Consensus        38 ~~~~~~-~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~  112 (381)
                      +.+..+ .+...++..-+....++.+.+.+.+...-..+   .+ -.++..++++...++..+..+....+++|.++...
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~  106 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF  106 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence            344444 33433333333334477776666654332211   11 12445577788888888888888899999999999


Q ss_pred             HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 016869          113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFL  192 (381)
Q Consensus       113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~  192 (381)
                      +++....|+++++....++|.|+++..|.++..+..|......+|.       ..+..|+.+++...++-+.+.+..|+.
T Consensus       107 tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~  179 (314)
T KOG1444|consen  107 TVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-------SFNLRGYSWALANCLTTAAFVVYVKKS  179 (314)
T ss_pred             HHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-------eecchhHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999998888764       444569999999999999999999998


Q ss_pred             hccCC--hhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhccccccccccc-h
Q 016869          193 VKKID--RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLESVKWS-T  269 (381)
Q Consensus       193 ~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~  269 (381)
                      .+..+  ..+...+..+.+.....+...+.                                  +.++.-....-+|. .
T Consensus       180 vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~----------------------------------ge~~~l~~~~~~~~~~  225 (314)
T KOG1444|consen  180 VDSANLNKFGLVFYNNLLSLPPLLILSFIT----------------------------------GELDALSLNFDNWSDS  225 (314)
T ss_pred             hccccccceeEEeehhHHHHHHHHHHHHHh----------------------------------cchHHHHhhcccccch
Confidence            76543  34455555545555443222000                                  11110011111121 1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          270 DIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      ..+..+...+.+.+.-.....+..+..+++...+........+.+-..+++|++.++...+|..+-++|.++|+..+.++
T Consensus       226 ~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~  305 (314)
T KOG1444|consen  226 SVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK  305 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence            11222222222233333445566777777777766666656667777777888999999999999999999999877554


Q ss_pred             CC
Q 016869          350 LP  351 (381)
Q Consensus       350 ~~  351 (381)
                      ++
T Consensus       306 k~  307 (314)
T KOG1444|consen  306 KK  307 (314)
T ss_pred             cc
Confidence            43

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.30  E-value=1.7e-10  Score=102.37  Aligned_cols=294  Identities=17%  Similarity=0.153  Sum_probs=204.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCC-chhHHHHHHHHHHHHHHHHHHH-hhhccchhhHHHHHHHHHH
Q 016869           17 MALRTLYLLLLGQLVSFSLALSSFTTAVIT--DLGVD-APITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFV   92 (381)
Q Consensus        17 ~~~~~~~~~~~~~l~a~~~~~~~~~~~~l~--~~~~~-~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~   92 (381)
                      .++++|.-+++.....++.=......+.+.  +.++. ..+.+++.+++..+.+-+..+. ++.++...+|+-+..++.+
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~  115 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFL  115 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhh
Confidence            345667666666555444444444444332  23443 3467788888776654433221 2333446899999999999


Q ss_pred             HHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHH
Q 016869           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGD  172 (381)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~  172 (381)
                      ....+.+.+.++.|.+...-.+..++..+-+++.+.++=++|..+....+..+..+|+++....|.   ....+.+..|.
T Consensus       116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs---~~sPNF~~~Gv  192 (367)
T KOG1582|consen  116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS---QTSPNFNLIGV  192 (367)
T ss_pred             hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc---ccCCCcceeeH
Confidence            988888889999999998888889999999999999999999999999999999999999999875   24556778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccC
Q 016869          173 ILVIAGAIFFAMSYVGEEFLVKKIDR--VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPL  250 (381)
Q Consensus       173 ll~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  250 (381)
                      .+.-.|-++-|.-..++++..+..+.  .++..+....|..+..+   |..+    ++                      
T Consensus       193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~---~mvl----Tg----------------------  243 (367)
T KOG1582|consen  193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFA---PMVL----TG----------------------  243 (367)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHH---HHHh----cc----------------------
Confidence            99999999999999999998876643  34443333333333221   1100    00                      


Q ss_pred             Ccccchhcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869          251 PSFRSTLEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY  329 (381)
Q Consensus       251 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~  329 (381)
                          ..+.. ....+.++...  ........+...+.......++..++.++........-++++++.++|..++|.+..
T Consensus       244 ----e~f~a~~fcaehp~~ty--Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~  317 (367)
T KOG1582|consen  244 ----ELFSAWTFCAEHPVRTY--GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYV  317 (367)
T ss_pred             ----cchhhhHHHHhCcHhHH--HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHh
Confidence                11111 11122333222  222222233444555666678888999988888888899999999999999999999


Q ss_pred             HHHHHHHhhhhheecCCCC
Q 016869          330 LAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       330 iG~~lil~G~~l~~~~~~~  348 (381)
                      -|..+|+.|+++-...+.+
T Consensus       318 ~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  318 WSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             hhhHHHHHHHHhhcccCCC
Confidence            9999999999998887743

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.28  E-value=1.7e-11  Score=108.94  Aligned_cols=282  Identities=14%  Similarity=0.160  Sum_probs=184.5

Q ss_pred             HHHHHHH-HHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHHHHHHHHhhc-cchhh
Q 016869           36 ALSSFTT-AVITDLGVDAPITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQF-TSISS  111 (381)
Q Consensus        36 ~~~~~~~-~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~  111 (381)
                      +++++.. -.+.+.+...--.++|..++..+.-=++.. .+  ..+.+.+.+.+.+.-...+..|..-|+++++ ++...
T Consensus        15 Ccsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~Pl   93 (330)
T KOG1583|consen   15 CCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPL   93 (330)
T ss_pred             hhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCchhhhheehheeeeeeeeccceeeecccceE
Confidence            3334444 455555544556778888776655433221 11  1234677777777666666678888899987 45578


Q ss_pred             HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc---c------cCCC---CCcchhHHHHHHHHH
Q 016869          112 VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---M------AGGG---GSRPLLGDILVIAGA  179 (381)
Q Consensus       112 ~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~---~------~~~~---~~~~~~G~ll~l~a~  179 (381)
                      ..+.++..++.+++++++++|+|.+.+|+.++.+..+|+++.......   .      ..+.   ......|..+...+-
T Consensus        94 HiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al  173 (330)
T KOG1583|consen   94 HIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFAL  173 (330)
T ss_pred             EEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999988764321   1      0001   112247888888899


Q ss_pred             HHHHHHHHHHHHhhccC--ChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchh
Q 016869          180 IFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTL  257 (381)
Q Consensus       180 ~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  257 (381)
                      +..|...+++|...+++  ++.|.+.+.-+.+.......      ...+++.|.                       ...
T Consensus       174 ~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~------~~div~~~~-----------------------~~~  224 (330)
T KOG1583|consen  174 LLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM------GDDIVSHWR-----------------------LAF  224 (330)
T ss_pred             HHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh------cchHHHHHH-----------------------HHh
Confidence            99999999999887776  55677766443322222111      111111110                       000


Q ss_pred             ccccc--c--ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHH
Q 016869          258 ELKSL--E--SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFA  333 (381)
Q Consensus       258 ~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~  333 (381)
                      ..++.  +  ... -...|...+....++..+--..+..-...++.+.++...+...++.+++...|++++|++.|+|.+
T Consensus       225 ~se~~~~p~~g~~-vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~  303 (330)
T KOG1583|consen  225 KSESYLIPLLGFK-VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAA  303 (330)
T ss_pred             cCcceeccccCcc-ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHH
Confidence            00100  0  011 122344455555555555344444555577777777788888999999999999999999999999


Q ss_pred             HHHhhhhheecCCCC
Q 016869          334 AVLIGLIIYSTTAKD  348 (381)
Q Consensus       334 lil~G~~l~~~~~~~  348 (381)
                      ++..|.+++.....+
T Consensus       304 lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  304 LVFFGTLLFANVWNH  318 (330)
T ss_pred             HHHHHHHHHHHHHcC
Confidence            999999999865444

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.26  E-value=8.3e-11  Score=92.79  Aligned_cols=127  Identities=20%  Similarity=0.251  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc---c---chhhHHHHHHHHHHHHHHHHH
Q 016869           26 LLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ---R---LQVSWYWYLLLGFVDVQGNFL   99 (381)
Q Consensus        26 ~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~---~~~~~~~~~~~g~~~~~~~~~   99 (381)
                      ..+.+.|++.+....+++.=.  +..+|.+.++.|-+...++++.+....++   .   .++.|....+.|+.....-.+
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl--~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~   83 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGL--EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence            345555555555555554333  34689999999999888888777665432   1   356677777777666666777


Q ss_pred             HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869          100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus       100 ~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      +|.|++...++.+..+..++|+++.+++++++|||++..+|+|+.+..+|++++.
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            8999999999999999999999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.19  E-value=1e-08  Score=93.25  Aligned_cols=244  Identities=13%  Similarity=0.130  Sum_probs=163.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhccch---hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhh-cChhHHHHHHH
Q 016869           52 APITQSVLCYLSLALAYGGILLYRRQRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFT  127 (381)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~~~lls  127 (381)
                      +|..+.+--.+.+.++-+.....+++...   ..+..-++.|++...++...+.|+++.+++.+..+. ..+.+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            45666554444444433333344444332   566777888999999999999999999998887766 56667899999


Q ss_pred             HHHhcccccHHHH----HHHHHHHhhhHHhhcccccccC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 016869          128 WVFLGTRYSVWQL----FGASLCVLGLGLMLLSDAEMAG-GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVV  202 (381)
Q Consensus       128 ~~~l~er~~~~~~----~gi~l~~~Gv~l~~~~~~~~~~-~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~  202 (381)
                      .++++|-.+..++    .++++.++|+.+....|...+. +...+...|.+..+++++.|..|.+..|..  +.|+.+..
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhH
Confidence            9999998776654    4888889999999888753221 123345679999999999999999987763  45666665


Q ss_pred             HHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc-ccccccccchhhHHHHHHHHHH
Q 016869          203 CMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL-KSLESVKWSTDIILSFVGNAAS  281 (381)
Q Consensus       203 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  281 (381)
                      .-+. .|.++..+..                                     ..... ..+....|..     .+. +..
T Consensus       169 lPqa-iGm~i~a~i~-------------------------------------~~~~~~~~~~k~~~~n-----il~-G~~  204 (269)
T PF06800_consen  169 LPQA-IGMLIGAFIF-------------------------------------NLFSKKPFFEKKSWKN-----ILT-GLI  204 (269)
T ss_pred             HHHH-HHHHHHHHHH-------------------------------------hhcccccccccchHHh-----hHH-HHH
Confidence            5554 6666654332                                     11111 1111112221     111 112


Q ss_pred             HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH----HHHHHHHHHhhhhh
Q 016869          282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT----YYLAFAAVLIGLII  341 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~----~~iG~~lil~G~~l  341 (381)
                      ...++..+..+.+..+..++=....+.++++.+.+.+++||+-+.+    .++|.++++.|.++
T Consensus       205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            3344466667777877766666666667999999999999998875    45688888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.19  E-value=2.4e-10  Score=96.85  Aligned_cols=223  Identities=16%  Similarity=0.260  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCC
Q 016869           87 LLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS  166 (381)
Q Consensus        87 ~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~  166 (381)
                      ....++..+.|+.+..+++..+++.++-+..+.-.|+.+++++.+|+|+...++++.++++-|++++...|.     .+.
T Consensus        57 aPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-----~~a  131 (290)
T KOG4314|consen   57 APFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-----EHA  131 (290)
T ss_pred             cceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-----hhh
Confidence            334555667799999999999999999999999999999999999999999999999999999999997763     456


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA  246 (381)
Q Consensus       167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~  246 (381)
                      ....|..+++.++...|+|-+.-|+...+.+--+...+++-.|.+-......|.+++++                     
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~---------------------  190 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAF---------------------  190 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHH---------------------
Confidence            67899999999999999999999999887765554444333343333222333322221                     


Q ss_pred             cccCCcccchhcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhccccc
Q 016869          247 FIPLPSFRSTLEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVN  325 (381)
Q Consensus       247 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t  325 (381)
                              ...|. +++...+     |....|.+..+..++.+.+.++....+...++-+.....--...+.++-+-..+
T Consensus       191 --------T~VE~~qsFA~~P-----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~n  257 (290)
T KOG4314|consen  191 --------TGVEHLQSFAAAP-----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFN  257 (290)
T ss_pred             --------hchHHHHHHhhCC-----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHH
Confidence                    11122 2333333     345666666677888888999998888888887665555667777776666788


Q ss_pred             HHHHHHHHHHHhhhhheecCCCC
Q 016869          326 WTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       326 ~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      ...+.|..++.+|.++....+.+
T Consensus       258 tl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  258 TLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             HHHHHHHHHHHHhHHheecccch
Confidence            89999999999999988876544

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.09  E-value=1.4e-09  Score=87.17  Aligned_cols=100  Identities=24%  Similarity=0.404  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhcc-------chhhHHHHHHHHHHHH-HHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHH
Q 016869           58 VLCYLSLALAYGGILLYRRQR-------LQVSWYWYLLLGFVDV-QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV  129 (381)
Q Consensus        58 ~~r~~~~~l~l~~~~~~~~~~-------~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~  129 (381)
                      .+|+..+.+.+..+...+++.       .++++.+....|.++. ....++++|.++.+ +.+..+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            468888888877766654321       1244566666688776 55778899999999 58889999999999999999


Q ss_pred             HhcccccHHHHHHHHHHHhhhHHhhcccc
Q 016869          130 FLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (381)
Q Consensus       130 ~l~er~~~~~~~gi~l~~~Gv~l~~~~~~  158 (381)
                      ++|||++++++.++.++++|++++..+|.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999875

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.08  E-value=7.9e-10  Score=89.67  Aligned_cols=118  Identities=25%  Similarity=0.437  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhh--h---ccchhhHHHHHHHHHHH-HHHHHHHHHHhhcc
Q 016869           34 SLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR--R---QRLQVSWYWYLLLGFVD-VQGNFLFNKAFQFT  107 (381)
Q Consensus        34 ~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~---~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~  107 (381)
                      +|+......+...++  .+|....++|+..+++ +++.....  +   +..++.+......+.+. ...+.+++.++++.
T Consensus         2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            355566667776654  7899999999999986 44433322  2   12234556666677774 55688889999999


Q ss_pred             chhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869          108 SISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus       108 ~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      +++.++++..+.|+++.+++++++|||+++++++|+.+++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.07  E-value=1e-10  Score=103.84  Aligned_cols=262  Identities=15%  Similarity=0.170  Sum_probs=180.0

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh-hh-------ccch---hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcC
Q 016869           50 VDAPITQSVLCYLSLALAYGGILLY-RR-------QRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (381)
Q Consensus        50 ~~~p~~~~~~r~~~~~l~l~~~~~~-~~-------~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~  118 (381)
                      -..|.+.++..-+....+.+.+-.. ++       ++.+   ...+....+.+....+..+-++.+.|++++...+=+++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            4578888888877665554433221 11       1111   22344555566666666666899999999999999999


Q ss_pred             hhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 016869          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR  198 (381)
Q Consensus       119 ~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~  198 (381)
                      ..+|+.+++++++|+|-+..-..++++.++|..+=.-.+.    ..+.-...|.++++.+.++-|+..+..||.....+.
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~----~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~  213 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG----STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD  213 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheecccccc----ccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence            9999999999999999888888888877777655433321    344566799999999999999999999987665543


Q ss_pred             --hHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc-ccccccccchhhHHHH
Q 016869          199 --VEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL-KSLESVKWSTDIILSF  275 (381)
Q Consensus       199 --~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  275 (381)
                        .....+....+.+...    |.+++-                              +.++. ..+. .-+..+.|++.
T Consensus       214 ~iw~lt~ynnv~a~lLfl----pll~ln------------------------------ge~~~v~~~~-~l~a~~Fw~~m  258 (347)
T KOG1442|consen  214 CIWRLTAYNNVNALLLFL----PLLILN------------------------------GEFQAVVGFP-HLPAIKFWILM  258 (347)
T ss_pred             eehhhHHHHHHHHHHHHH----HHHHHc------------------------------chHHHHcCcc-cchHHHHHHHH
Confidence              3555555555555543    331110                              11111 1111 23345556554


Q ss_pred             HHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCCC
Q 016869          276 VGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  350 (381)
Q Consensus       276 ~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~~  350 (381)
                      ...+.+.+.......+-+|..++.+-.++..-.-....++++.+++|.-+..-|-|-.+++.|...|.+.++.++
T Consensus       259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em  333 (347)
T KOG1442|consen  259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM  333 (347)
T ss_pred             HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence            444443443334445557778888888888878788899999999999999999999999999999998665433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.05  E-value=1.2e-09  Score=88.49  Aligned_cols=125  Identities=20%  Similarity=0.281  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcc
Q 016869          180 IFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLEL  259 (381)
Q Consensus       180 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  259 (381)
                      ++||.+.+..|+..++.|+.....+....+.+ .....                                     ...+.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------------------------~~~~~   42 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILL-------------------------------------LILGR   42 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHH-------------------------------------Hhhcc
Confidence            46889999999999999999888888877765 32221                                     11111


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhh
Q 016869          260 KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGL  339 (381)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~  339 (381)
                      .+....++.......+.+... ....+.++++++++.++..++....++|+++.+++++++||++++.+++|+++++.|+
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~  121 (126)
T PF00892_consen   43 KPFKNLSPRQWLWLLFLGLLG-TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGV  121 (126)
T ss_pred             ccccCCChhhhhhhhHhhccc-eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            111222333333444454433 4667799999999999999999999999999999999999999999999999999998


Q ss_pred             hhee
Q 016869          340 IIYS  343 (381)
Q Consensus       340 ~l~~  343 (381)
                      ++..
T Consensus       122 ~l~~  125 (126)
T PF00892_consen  122 VLIS  125 (126)
T ss_pred             HHHH
Confidence            8753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.05  E-value=3.2e-09  Score=83.89  Aligned_cols=135  Identities=16%  Similarity=0.165  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccC
Q 016869          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPL  250 (381)
Q Consensus       171 G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  250 (381)
                      ..++++++++++++..+..|-..++.|+.............+......                                
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~--------------------------------   51 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLL--------------------------------   51 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence            458999999999999999999889888876666655444444432210                                


Q ss_pred             CcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhc-chhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869          251 PSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL-SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY  329 (381)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~  329 (381)
                          ..-..+...+.+...  |...+..+........+|+++++. ..+.++++... .|+++++++++++||+++..++
T Consensus        52 ----~~g~~~~~~~~~~k~--~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~-svvl~~lls~lfL~E~ls~~~~  124 (140)
T COG2510          52 ----VTGNWQAGGEIGPKS--WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKT-SVVLAVLLSILFLGERLSLPTW  124 (140)
T ss_pred             ----hcCceecccccCcce--ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcCCCCHHHH
Confidence                000011111122222  333333334456677899999999 55556666555 4599999999999999999999


Q ss_pred             HHHHHHHhhhhheec
Q 016869          330 LAFAAVLIGLIIYST  344 (381)
Q Consensus       330 iG~~lil~G~~l~~~  344 (381)
                      +|+.+|++|.++...
T Consensus       125 iG~~LI~~Gailvs~  139 (140)
T COG2510         125 IGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhCeeeEec
Confidence            999999999987754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.00  E-value=1.5e-08  Score=85.59  Aligned_cols=137  Identities=15%  Similarity=0.256  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccC-------ChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccc
Q 016869          171 GDILVIAGAIFFAMSYVGEEFLVKKI-------DRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKF  243 (381)
Q Consensus       171 G~ll~l~a~~~~a~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  243 (381)
                      |.++++.|.++.|++.++.|+..++.       ++.+...+....+.++..+..                          
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~--------------------------   54 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLA--------------------------   54 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence            67899999999999999999987662       455666666666666654322                          


Q ss_pred             ccccccCCcccchhcccc-------cc--ccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHH
Q 016869          244 PFAFIPLPSFRSTLELKS-------LE--SVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVI  314 (381)
Q Consensus       244 p~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i  314 (381)
                                 ...|...       ..  +.+.....+...+..+...+..+...+..+++.++.+.++......+...+
T Consensus        55 -----------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~  123 (153)
T PF03151_consen   55 -----------FLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVIL  123 (153)
T ss_pred             -----------HHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHH
Confidence                       1111111       00  001022333444444555677888999999999999999999999999999


Q ss_pred             HHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869          315 LRIFCYHQQVNWTYYLAFAAVLIGLIIYST  344 (381)
Q Consensus       315 ~~~~~~~e~~t~~~~iG~~lil~G~~l~~~  344 (381)
                      .+++++||++|+.+++|.++.+.|.++|++
T Consensus       124 ~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen  124 LSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00803 nst UDP-galactose transporter

Probab=98.93  E-value=2.4e-08  Score=89.91  Aligned_cols=197  Identities=13%  Similarity=0.131  Sum_probs=125.5

Q ss_pred             hhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccccc---------------ccCC-----CCCcc
Q 016869          109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---------------MAGG-----GGSRP  168 (381)
Q Consensus       109 ~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~---------------~~~~-----~~~~~  168 (381)
                      ........+..++++++..+.+.+||.+..|+++..+...|++.....|..               .++.     .....
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~   83 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNP   83 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccH
Confidence            344556678888899999988889998899999999988888754333221               0010     11244


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCChh--HHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869          169 LLGDILVIAGAIFFAMSYVGEEFLVKKIDRV--EVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA  246 (381)
Q Consensus       169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~  246 (381)
                      ..|....+.+..+-+...+++++..|+.+..  .......+++.+......                             
T Consensus        84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~-----------------------------  134 (222)
T TIGR00803        84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVL-----------------------------  134 (222)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence            5677778888888889999999987664322  111111222222211000                             


Q ss_pred             cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccH
Q 016869          247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW  326 (381)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~  326 (381)
                      .....+  ...+...+.  .++...+...    .+....+.+..+.+|+.++.+.++....+++++.+++++++||+++.
T Consensus       135 ~~~~~~--~~~~~~~~~--~~~~~~~~~~----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~  206 (222)
T TIGR00803       135 LWSDGT--LISNFGFFI--GYPTAVWIVG----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS  206 (222)
T ss_pred             hhcccc--hhhccCccc--CCchHHHHHH----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence            000000  000011111  1222222222    22334446788899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhe
Q 016869          327 TYYLAFAAVLIGLIIY  342 (381)
Q Consensus       327 ~~~iG~~lil~G~~l~  342 (381)
                      .+++|..+++.|+.+|
T Consensus       207 ~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       207 TFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHHeeeEeC
Confidence            9999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.89  E-value=1.3e-07  Score=81.92  Aligned_cols=261  Identities=11%  Similarity=0.074  Sum_probs=179.7

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHH
Q 016869           49 GVDAPITQSVLCYLSLALAYGGILLYRRQRL-QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (381)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls  127 (381)
                      ++.--+.+.+.+-+.+.+-++.+-+.|.... .++.+.++..+++-....+..-.+++|.++...++...++.+..+...
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            5544566666666655555543322221111 233445566677777777777899999999999999999999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHHHHHH
Q 016869          128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMI  205 (381)
Q Consensus       128 ~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~  205 (381)
                      ..++|.|.+-.+..+-++.++.-....++|...........+.|++++...++.-+.+....|+..+-.  ...+.+.+.
T Consensus       113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYn  192 (309)
T COG5070         113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYN  192 (309)
T ss_pred             HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHh
Confidence            999999999999999999988888887776421111112446799999999999999999999876543  335666666


Q ss_pred             HHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccchhcccccc----ccccchhhHHHHHHHHHH
Q 016869          206 GVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRSTLELKSLE----SVKWSTDIILSFVGNAAS  281 (381)
Q Consensus       206 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  281 (381)
                      .+.+..+.....                                     ..+|..+..    ..+.....++.+-+.+  
T Consensus       193 NllslPiL~~~s-------------------------------------~~~edws~~n~annl~~d~l~am~ISgl~--  233 (309)
T COG5070         193 NLLSLPILLSFS-------------------------------------FLFEDWSPGNLANNLSVDSLMAMFISGLC--  233 (309)
T ss_pred             hhHHHHHHHHHH-------------------------------------HHhccCCcchhhcCCChHHHHHHHHHHHH--
Confidence            656655543222                                     122221111    1222222333333332  


Q ss_pred             HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      .++--..-.|.++..+++.-++...++..-..+.|.++|||+.+...+....+=.++..+|...+.+
T Consensus       234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2322245567888899998888888777888999999999999999999988888888888876544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.88  E-value=3.3e-07  Score=85.96  Aligned_cols=218  Identities=13%  Similarity=0.172  Sum_probs=125.2

Q ss_pred             HHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC--------
Q 016869           94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG--------  165 (381)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~--------  165 (381)
                      ..++...+.|+.+.|.+..+.+.....++.++++..++|||++++++.|+.++++|..++....++.+....        
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~  140 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALL  140 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHh
Confidence            334666789999999999999999999999999999999999999999999999999987654432111100        


Q ss_pred             -CcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH-HHHhhcccccccchhccccccccccccccc
Q 016869          166 -SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS-VVQLYPFLLGDMITFTYNKLYTSLCGMIKF  243 (381)
Q Consensus       166 -~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  243 (381)
                       +.....+... ...+...+.....+|..++ +...........|.... ....                         +
T Consensus       141 ~~~~fl~y~~~-~~~~~~~L~~~~~~r~g~~-~i~vyi~i~sl~Gs~tvl~~K~-------------------------i  193 (300)
T PF05653_consen  141 SQPGFLVYFIL-VLVLILILIFFIKPRYGRR-NILVYISICSLIGSFTVLSAKA-------------------------I  193 (300)
T ss_pred             cCcceehhHHH-HHHHHHHHHHhhcchhccc-ceEEEEEEeccccchhhhHHHH-------------------------H
Confidence             0011111111 1112222222222221111 11111111111111110 0000                         0


Q ss_pred             ccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcc
Q 016869          244 PFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQ  322 (381)
Q Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e  322 (381)
                      -....      ..++.++  +. ..+..|.+.+....+....-...++++++.++. +.++.+..-...+++-+.++++|
T Consensus       194 ~~~i~------~~~~g~~--~f-~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e  264 (300)
T PF05653_consen  194 SILIK------LTFSGDN--QF-TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQE  264 (300)
T ss_pred             HHHHH------HHhcCch--hh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcc
Confidence            00000      1111111  11 123345555555555666667888899995544 55566666668889999999998


Q ss_pred             c--ccH----HHHHHHHHHHhhhhheecCCC
Q 016869          323 Q--VNW----TYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       323 ~--~t~----~~~iG~~lil~G~~l~~~~~~  347 (381)
                      .  .++    ....|+.+++.|+.+.+..++
T Consensus       265 ~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  265 FSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             cccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            5  344    456788999999999876543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.86  E-value=8.8e-08  Score=88.18  Aligned_cols=130  Identities=22%  Similarity=0.253  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc---chhhHHHHHHHHHHHH-HHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDV-QGN   97 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~-~~~   97 (381)
                      .++...+.+.+++++..+...+...++...++.....+++.++++++.+.....++.   .++.+...+..+.+.. .+.
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            567777788888888888887777654333344555578888888888776644322   1334444566676664 457


Q ss_pred             HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhH
Q 016869           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG  151 (381)
Q Consensus        98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~  151 (381)
                      .+++.++++.+++.++.+..+.|++++++++++++||++..++.|+.+.+.|+.
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            778999999999999999999999999999999999999999999999998863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.63  E-value=1.1e-06  Score=82.74  Aligned_cols=138  Identities=12%  Similarity=0.148  Sum_probs=100.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA  246 (381)
Q Consensus       167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~  246 (381)
                      +...|.++.+++++.|+...+..|.. .+.++.+...+...++.++.....                             
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~-----------------------------   54 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLM-----------------------------   54 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence            45689999999999999999999864 668888888888878776543211                             


Q ss_pred             cccCCcccchhc-cccccccccchhhHHH-HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccc
Q 016869          247 FIPLPSFRSTLE-LKSLESVKWSTDIILS-FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQV  324 (381)
Q Consensus       247 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~  324 (381)
                              .... .+.......+...+.. ..+ .......+.++++++++.++..+++...+.|++..+++++++||++
T Consensus        55 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~  125 (296)
T PRK15430         55 --------SICRQWSYLKTLIQTPQKIFMLAVS-AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF  125 (296)
T ss_pred             --------HHHccHHHHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence                    0000 0000000001122221 222 2224556789999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHhhhhhee
Q 016869          325 NWTYYLAFAAVLIGLIIYS  343 (381)
Q Consensus       325 t~~~~iG~~lil~G~~l~~  343 (381)
                      +..+++|.++.++|+.+..
T Consensus       126 ~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430        126 RRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.57  E-value=5.8e-05  Score=71.64  Aligned_cols=108  Identities=14%  Similarity=0.114  Sum_probs=81.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHH-hhcChhHHHHHHHHHHhcccc-------cHHHHHHHHHHHhhhH
Q 016869           80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTL-LDCCAIPCAIVFTWVFLGTRY-------SVWQLFGASLCVLGLG  151 (381)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~i-l~~~~pi~~~lls~~~l~er~-------~~~~~~gi~l~~~Gv~  151 (381)
                      ...+...++.|.+...++..+..+.++.+++.... -..+.-+...++..++++|=.       .....+|+++.++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            44566667788888889999999999999987754 446667888888888887533       2457889999999999


Q ss_pred             Hhhc----ccccccC--CCCCcchhHHHHHHHHHHHHHHHHH
Q 016869          152 LMLL----SDAEMAG--GGGSRPLLGDILVIAGAIFFAMSYV  187 (381)
Q Consensus       152 l~~~----~~~~~~~--~~~~~~~~G~ll~l~a~~~~a~~~v  187 (381)
                      +...    .|...++  ..+.+...|.++++++++.++.|..
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            9988    4321111  2234567899999999999999993

>TIGR00688 rarD rarD protein

Probab=98.55  E-value=2.8e-06  Score=78.14  Aligned_cols=138  Identities=12%  Similarity=0.203  Sum_probs=98.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP  249 (381)
Q Consensus       170 ~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  249 (381)
                      .|.++.++++++|+...+..|. ..+.++.+...+.++++.++..... ..                           . 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~-~~---------------------------~-   51 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSV-TL---------------------------F-   51 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHH-HH---------------------------H-
Confidence            4889999999999999999997 4568889999988878776643211 00                           0 


Q ss_pred             CCcccchhc--cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHH
Q 016869          250 LPSFRSTLE--LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWT  327 (381)
Q Consensus       250 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~  327 (381)
                           ...+  .+.....+.. ..+......+......+.++++++++.++..+++...+.|+++.+++++++||+++.+
T Consensus        52 -----~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~  125 (256)
T TIGR00688        52 -----RQWAALIERLKRIQKR-PLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF  125 (256)
T ss_pred             -----cchHHHHHHHhCcccc-hHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence                 0000  0011111111 1121222222224556688999999999999999899999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhee
Q 016869          328 YYLAFAAVLIGLIIYS  343 (381)
Q Consensus       328 ~~iG~~lil~G~~l~~  343 (381)
                      +++|..+.++|+.+..
T Consensus       126 ~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688       126 QFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988664

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.53  E-value=2.3e-06  Score=79.97  Aligned_cols=131  Identities=10%  Similarity=0.071  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCC
Q 016869          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLP  251 (381)
Q Consensus       172 ~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (381)
                      .++.+++++++|...+..|+..++.+..+  .+....+.+...    |+                               
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~----~~-------------------------------   45 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLLT----PY-------------------------------   45 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHHH----HH-------------------------------
Confidence            46789999999999999998877644432  222222222221    22                               


Q ss_pred             cccchhc--cccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHH
Q 016869          252 SFRSTLE--LKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYY  329 (381)
Q Consensus       252 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~  329 (381)
                         ....  .......+...  +......+.....++.+++++.++.++..+.......|+++.+++++++||+++..++
T Consensus        46 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~  120 (281)
T TIGR03340        46 ---GLWYLAQVGWSRLPATF--WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAW  120 (281)
T ss_pred             ---HHHhcccCCCCCcchhh--HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHH
Confidence               1110  11111111122  2222222333556778888999998888888877778999999999999999999999


Q ss_pred             HHHHHHHhhhhheec
Q 016869          330 LAFAAVLIGLIIYST  344 (381)
Q Consensus       330 iG~~lil~G~~l~~~  344 (381)
                      +|..+++.|+++...
T Consensus       121 ~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340       121 LGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.51  E-value=3.6e-06  Score=79.03  Aligned_cols=132  Identities=12%  Similarity=0.004  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc-----chhhHHHHHHHHHHHHHH-
Q 016869           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR-----LQVSWYWYLLLGFVDVQG-   96 (381)
Q Consensus        23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~-   96 (381)
                      .+...+.+.+++++..+...+...+   .++...+.+....+++.+.+........     ....|......+++.... 
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSRLPL---PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            4555555556666655555555442   2345566777777777777665433211     124455666667765444 


Q ss_pred             HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        97 ~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ..+++.++++.+++.++.+..+.|++++++++++++|+++..+++|..+.+.|+.+....+
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            6777999999999999999999999999999999999999999999999999999886653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.51  E-value=5.8e-06  Score=67.52  Aligned_cols=122  Identities=8%  Similarity=0.083  Sum_probs=83.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP  249 (381)
Q Consensus       170 ~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  249 (381)
                      .|.++.+.+.++-+...++-|+-.++.+..+.... . ...+..                                    
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~~~~------------------------------------   43 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAALLA------------------------------------   43 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHHHHH------------------------------------
Confidence            47889999999999999999988776543321111 0 000000                                    


Q ss_pred             CCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHH--hhcccccHH
Q 016869          250 LPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIF--CYHQQVNWT  327 (381)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~--~~~e~~t~~  327 (381)
                            .         . +. ....+.++.+ ....+.+|.+++++.+...+.-.....++...+.++.  ++||++|+.
T Consensus        44 ------~---------~-~p-~~~i~lgl~~-~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~  105 (129)
T PRK02971         44 ------F---------G-LA-LRAVLLGLAG-YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK  105 (129)
T ss_pred             ------H---------h-cc-HHHHHHHHHH-HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence                  0         0 00 0123455544 4556689999999987777765555555777777774  899999999


Q ss_pred             HHHHHHHHHhhhhheecCCC
Q 016869          328 YYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       328 ~~iG~~lil~G~~l~~~~~~  347 (381)
                      +++|.++|++|+++.++.++
T Consensus       106 ~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971        106 KTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHhccCCC
Confidence            99999999999999876544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.49  E-value=4.6e-06  Score=80.33  Aligned_cols=135  Identities=16%  Similarity=0.113  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-cch-----hh--HHHHHHHHHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-RLQ-----VS--WYWYLLLGFVD   93 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~-----~~--~~~~~~~g~~~   93 (381)
                      ..+..+....+++|+......+...+ ...++...+++...+.++.+.+......+ ..+     .+  ....+..+++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            44666666667777766666665544 23344455656555555555443332211 100     11  11222233433


Q ss_pred             HHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ..+..++++++++.+++.+++...+.|++++++++++++|++++.+++|.++.+.|+.+.....
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            3345667899999999999999999999999999999999999999999999999999987654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.47  E-value=7.3e-06  Score=77.02  Aligned_cols=133  Identities=15%  Similarity=-0.021  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc---chhhHHHHHHHHHHHHHH-H
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDVQG-N   97 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~-~   97 (381)
                      ..+..++...+++++......+...+  ..+|...... .+.+++++.++.....+.   ....+...+..|++.... .
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            34667777777777776666666653  2455555444 355566666655543221   112232335566666555 5


Q ss_pred             HHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        98 ~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      .++++++++.+++.++++..+.|+++.++++++++|+++..|++|..+.+.|++......
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            567999999999999999999999999999999999999999999999999999886553

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.39  E-value=2.6e-06  Score=78.26  Aligned_cols=224  Identities=12%  Similarity=0.154  Sum_probs=130.8

Q ss_pred             HHHHHH-HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcccccccCCCC---
Q 016869           90 GFVDVQ-GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGG---  165 (381)
Q Consensus        90 g~~~~~-~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~~~~~~~~~---  165 (381)
                      |.+.+. +...-+.|+.+.|.+..+.+.+++.+..++++..++|||+++...+|+.++++|-.++....++.++-..   
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e  149 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE  149 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence            444444 3677789999999999999999999999999999999999999999999999999988876542111000   


Q ss_pred             ---CcchhHHHHHHHH-HHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHH-HHHhhcccccccchhcccccccccccc
Q 016869          166 ---SRPLLGDILVIAG-AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS-VVQLYPFLLGDMITFTYNKLYTSLCGM  240 (381)
Q Consensus       166 ---~~~~~G~ll~l~a-~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~  240 (381)
                         .....+.+.-.+- .+...+-....+......+...+.....+.|.+-. .+..                       
T Consensus       150 l~~~~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKa-----------------------  206 (335)
T KOG2922|consen  150 VWELATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKA-----------------------  206 (335)
T ss_pred             HHHHhcCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHH-----------------------
Confidence               0001111111111 11111111111111111122333333222221110 0000                       


Q ss_pred             cccccccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhc-chhhHHHHHhHHHHHHHHHHHHHh
Q 016869          241 IKFPFAFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKL-SGATMLILSVLTSDMWAVILRIFC  319 (381)
Q Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~a~~~~~~~~~~pv~a~i~~~~~  319 (381)
                        +-.+.      +..+...+  +.. .+..|+..+..+.|....-...+++++. -.+.+.++.+..-..++++.+.++
T Consensus       207 --lg~ai------klt~~g~~--ql~-~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~  275 (335)
T KOG2922|consen  207 --LGIAI------KLTFSGNN--QLF-YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAIL  275 (335)
T ss_pred             --HHHHH------HHHhcCCc--ccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Confidence              00000      01111111  111 1245566666666555555677889999 555666777777778899999999


Q ss_pred             hcccc--c----HHHHHHHHHHHhhhhheecCCC
Q 016869          320 YHQQV--N----WTYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       320 ~~e~~--t----~~~~iG~~lil~G~~l~~~~~~  347 (381)
                      |+|--  +    ..++.|+..++.|+.+....++
T Consensus       276 Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  276 FKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKD  309 (335)
T ss_pred             HHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence            99853  2    2577899999999998866543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.38  E-value=1.7e-05  Score=66.74  Aligned_cols=128  Identities=15%  Similarity=0.117  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-----CCCchhHHHHHHHHHHHHHHHHHHHhhhc-c---------------chhhH
Q 016869           25 LLLGQLVSFSLALSSFTTAVITDL-----GVDAPITQSVLCYLSLALAYGGILLYRRQ-R---------------LQVSW   83 (381)
Q Consensus        25 ~~~~~l~a~~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~---------------~~~~~   83 (381)
                      +.++....++.+.-+...+.+.+.     ...+|..+....-..+.+.+.+.....+. +               ..+.+
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            455666666777777777766655     57788888888888888888776543211 0               12334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHH
Q 016869           84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (381)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l  152 (381)
                      ...+..|++....|...+..++++++...+++.....+.+.++++++++|+++..++.|+.++++|+++
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            555666777777788889999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.30  E-value=2.2e-05  Score=73.80  Aligned_cols=129  Identities=16%  Similarity=0.002  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc----cchhhHHHHHHHHHHHHHHHHH
Q 016869           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ----RLQVSWYWYLLLGFVDVQGNFL   99 (381)
Q Consensus        24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~   99 (381)
                      +..++.+.+++++......+...+  ..+|....+   ...++.+.+.......    .....|...+..++....+..+
T Consensus       157 G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l  231 (295)
T PRK11689        157 SYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAA  231 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            445555555555555555555543  234544322   2223333332222211    1123344445555544445778


Q ss_pred             HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869          100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus       100 ~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ++.++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.+.|+.+....+
T Consensus       232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            8999999999999999999999999999999999999999999999999998887653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.25  E-value=5.4e-05  Score=71.37  Aligned_cols=136  Identities=16%  Similarity=0.097  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHh-hh---------ccchhhHHHHHHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGV-DAPITQSVLCYLSLALAYGGILLY-RR---------QRLQVSWYWYLLLG   90 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~-~~---------~~~~~~~~~~~~~g   90 (381)
                      ..+..++.+.+++++......+...+... .+.....++-.....+.+...... ..         ....+.|...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            35777777777777777777776654321 122233333333333322222111 11         11123455566667


Q ss_pred             HHHHHH-HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           91 FVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        91 ~~~~~~-~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ++.... ..+++.++++.++..++.+..+.|++..++++++++|+++..+++|..+.+.|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            666655 5666889999999999999999999999999999999999999999999999999887653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.24  E-value=2e-05  Score=74.37  Aligned_cols=135  Identities=13%  Similarity=0.066  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-c-chh---h---------HHH-HH
Q 016869           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-R-LQV---S---------WYW-YL   87 (381)
Q Consensus        23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~-~~~---~---------~~~-~~   87 (381)
                      .|..++.+.+++++......+...+....+|...+.+....+++.+.|....... . ...   .         ... .+
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL  224 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence            4555555555555555555555444335678888888888888888887553221 1 000   0         011 11


Q ss_pred             HHHH-HHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           88 LLGF-VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        88 ~~g~-~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ..+. +....+...+.+++++++..+++.....|++++++++++++|+++..+++|..+++.|+.+....+
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            1122 111224455689999999999999999999999999999999999999999999999999987653

specificities overlap.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.20  E-value=3.1e-05  Score=61.62  Aligned_cols=60  Identities=8%  Similarity=0.003  Sum_probs=54.8

Q ss_pred             HHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869           96 GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (381)
Q Consensus        96 ~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~  155 (381)
                      ..++...+++..|.+.+..+.++.++++.+++++++|||++++|++|+.++++|++++..
T Consensus        50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            366668999999999998888899999999999999999999999999999999998754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.17  E-value=5.1e-05  Score=69.09  Aligned_cols=143  Identities=10%  Similarity=0.136  Sum_probs=107.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA  246 (381)
Q Consensus       167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~  246 (381)
                      +...|.++++.+-+.|+.--.+.|- .+..+..|......+|+..+..+...+.                          
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~--------------------------   56 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLL--------------------------   56 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence            3457999999999999999888874 5667888999998888888876544111                          


Q ss_pred             cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccH
Q 016869          247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNW  326 (381)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~  326 (381)
                                -..+...+.-.+.+.+..+...+.....-+..+.|+.+......+++-++++|++.++++.+++||+++.
T Consensus        57 ----------r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~  126 (293)
T COG2962          57 ----------RQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR  126 (293)
T ss_pred             ----------hhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH
Confidence                      1112222222233344444444443556667889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhheecCC
Q 016869          327 TYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       327 ~~~iG~~lil~G~~l~~~~~  346 (381)
                      .|++...+..+|+..-....
T Consensus       127 ~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962         127 LQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHc
Confidence            99999999999987766543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.14  E-value=4e-05  Score=71.88  Aligned_cols=129  Identities=11%  Similarity=0.088  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH---H-HHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCY---L-SLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN   97 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~---~-~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   97 (381)
                      .+++..+.+.+++.+......+...    .+|...++...   + .+.+++.++ .+.++...+..+..++.|++...++
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia~  225 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIGN  225 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHHH
Confidence            5688888888777766655555442    46666644333   3 333333333 1112222334445566888876667


Q ss_pred             HHHHHHhh-ccchhhHHHhhcChhHHHHHHHHHHhcccccHHHH----HHHHHHHhhhHHhhc
Q 016869           98 FLFNKAFQ-FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLL  155 (381)
Q Consensus        98 ~~~~~al~-~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~----~gi~l~~~Gv~l~~~  155 (381)
                      .+++.+.+ +.+++.+.++.+..|+...+++.+++||+.+++|+    +|..+.+.|+.++..
T Consensus       226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            88889999 99999999999999999999999999999999999    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.09  E-value=0.00019  Score=66.58  Aligned_cols=133  Identities=28%  Similarity=0.292  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHH-HHHHHHHHHHHHHHHhhh--ccchhhHHHHHHHHHHHHH-H
Q 016869           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSV-LCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQ-G   96 (381)
Q Consensus        21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~-~   96 (381)
                      ...+...+.+.+++++......+.+.   ..++..... +..........+......  ......+......|++... +
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            45666777777777776665655554   234444444 333322222222222211  2234567777777887775 5


Q ss_pred             HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (381)
Q Consensus        97 ~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~  156 (381)
                      ..+++.+++..+++..+++..+.|++..++++++++|+++..+++|+.+.+.|+.+....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            788899999999999999999999999999999999999999999999999999988654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.07  E-value=0.00016  Score=69.74  Aligned_cols=134  Identities=13%  Similarity=0.032  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCchhHHHHHHHHHHHHHHHHHHHhhhc-cc-----------hh-h
Q 016869           21 TLYLLLLGQLVSFSLALSSFTTAVITDLG-----VDAPITQSVLCYLSLALAYGGILLYRRQ-RL-----------QV-S   82 (381)
Q Consensus        21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~~~-----~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~-----------~~-~   82 (381)
                      .+.|.+++.+.+++++.-+..++.+.+..     ..++.....+-..+++++++|+...... ..           .. .
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            35677777777777777777777665432     2345555555567788777776542211 00           00 1


Q ss_pred             HHHHHHHHHHHHHH----HHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869           83 WYWYLLLGFVDVQG----NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus        83 ~~~~~~~g~~~~~~----~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      +...+...+.....    |...+++++.+++...++...+.|+++.++++++++|+++..+++|..+++.|+.+..
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            11111112222222    3334579999999999999999999999999999999999999999999999998764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.01  E-value=0.0002  Score=56.98  Aligned_cols=63  Identities=14%  Similarity=0.186  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheec
Q 016869          282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  344 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~  344 (381)
                      ...++.++..++++.+..++-....+.++++.+++++++||++++.+++|..+++.|+++...
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            344567888999997777776555588899999999999999999999999999999987643

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.92  E-value=1.3e-06  Score=77.02  Aligned_cols=269  Identities=14%  Similarity=0.139  Sum_probs=167.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhcc-chhhHHHHHHHHHHHHHHHHHHHH
Q 016869           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR-LQVSWYWYLLLGFVDVQGNFLFNK  102 (381)
Q Consensus        24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~  102 (381)
                      .++++++-++.|+.....+.+..    .+|..++.--.+.+.++-+...+...+. ..+.+..-++.|.+...++...+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfk   78 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFK   78 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhh
Confidence            45667777777777665554443    3577776655544444443333333332 233444556667777777888899


Q ss_pred             HhhccchhhHHHhhc-ChhHHHHHHHHHHhcccccHHH----HHHHHHHHhhhHHhhccccc-ccCCCCCcchhHHHHHH
Q 016869          103 AFQFTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI  176 (381)
Q Consensus       103 al~~~~~~~~~il~~-~~pi~~~lls~~~l~er~~~~~----~~gi~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~ll~l  176 (381)
                      |.++.+++.+..+.+ ++-+-+.+++.+.++|=.+..|    .+++.+.++|+.+....|.. .+.++.++...|....+
T Consensus        79 a~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~  158 (288)
T COG4975          79 AIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILL  158 (288)
T ss_pred             heeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeee
Confidence            999999988876654 4567788899999999888755    45677788898888887652 22333344567888888


Q ss_pred             HHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccccccCCcccch
Q 016869          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIPLPSFRST  256 (381)
Q Consensus       177 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (381)
                      .+.+.|-.|.+..+..  +.|..+...-+. .|.++..+..                                     ..
T Consensus       159 iSt~GYv~yvvl~~~f--~v~g~saiLPqA-iGMv~~ali~-------------------------------------~~  198 (288)
T COG4975         159 ISTLGYVGYVVLFQLF--DVDGLSAILPQA-IGMVIGALIL-------------------------------------GF  198 (288)
T ss_pred             eeccceeeeEeeeccc--cccchhhhhHHH-HHHHHHHHHH-------------------------------------hh
Confidence            9999999999977755  345554444444 5666654332                                     11


Q ss_pred             hcc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHH----HH
Q 016869          257 LEL-KSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTY----YL  330 (381)
Q Consensus       257 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~----~i  330 (381)
                      ... ..+....|..      +..+.....++..+..+-++.+ ++--+++.... +.+.+=+.++++|+-|..|    ++
T Consensus       199 ~~~~~~~~K~t~~n------ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgV-iisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         199 FKMEKRFNKYTWLN------IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGV-IISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             cccccchHHHHHHH------HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhee-eeeecceEEEEeccCchhhhhhhhh
Confidence            111 1111111111      1112223344455555555543 34444555555 8899999999999998866    45


Q ss_pred             HHHHHHhhhhhee
Q 016869          331 AFAAVLIGLIIYS  343 (381)
Q Consensus       331 G~~lil~G~~l~~  343 (381)
                      |.++++.|..+..
T Consensus       272 Giilivvgai~lg  284 (288)
T COG4975         272 GIILIVVGAILLG  284 (288)
T ss_pred             hHHHHHHHhhhhh
Confidence            7888888776654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.92  E-value=8.4e-05  Score=59.37  Aligned_cols=65  Identities=18%  Similarity=0.294  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869          282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~  347 (381)
                      ....+.++.++.++.++ .+.....+.|+++.+++++++||+++..+++|.+++++|+.+....+.
T Consensus        45 ~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   45 FGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            33567899999999776 555777778999999999999999999999999999999999887553

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.59  E-value=0.00071  Score=54.32  Aligned_cols=64  Identities=8%  Similarity=0.269  Sum_probs=48.8

Q ss_pred             HHHHHHHhhhhcchhhHH-HHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869          284 MFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       284 ~~~~l~~~~l~~~~a~~~-~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~  347 (381)
                      ..+.++..++++.+..++ ++..-+-.+.+.+.++++|||++|+.+++|..++++|++..+...+
T Consensus        42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            344677778888443333 3333344588899999999999999999999999999999876554

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.57  E-value=0.00041  Score=56.68  Aligned_cols=71  Identities=18%  Similarity=0.275  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhhHHHhhcChhHHHHHHHHH--HhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869           86 YLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV--FLGTRYSVWQLFGASLCVLGLGLMLLS  156 (381)
Q Consensus        86 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~--~l~er~~~~~~~gi~l~~~Gv~l~~~~  156 (381)
                      ++..|+..... ..++.++++..+++.+..+.+..++.+.+.++.  ++||++++.|++|+.+.++|+.++..+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            34455555554 677799999999999998888888888888875  899999999999999999999998765

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.55  E-value=0.0025  Score=60.58  Aligned_cols=74  Identities=16%  Similarity=0.169  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          275 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       275 ~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                      ++..+..-+.++.++..+.++.+.+-+.+......++++++++++++++.++.+++|+.+++.|+.+....+..
T Consensus        82 y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   82 YFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            44445567888899999999999888888888888999999999999999999999999999999988876643

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.46  E-value=0.0033  Score=49.55  Aligned_cols=69  Identities=16%  Similarity=0.239  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhh-HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869           85 WYLLLGFVDVQGNFLFNKAFQFTSISS-VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (381)
Q Consensus        85 ~~~~~g~~~~~~~~~~~~al~~~~~~~-~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~  153 (381)
                      .....-.......++...++++.|.+. +++......+.+.+.+.+++||++++.|++|+.+.+.|++.+
T Consensus        37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            333434444445667789999999954 467777888999999999999999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.35  E-value=0.0082  Score=56.65  Aligned_cols=133  Identities=15%  Similarity=0.100  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh--hhc---------cchhhHHHHHHHHHH
Q 016869           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RRQ---------RLQVSWYWYLLLGFV   92 (381)
Q Consensus        24 ~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~---------~~~~~~~~~~~~g~~   92 (381)
                      |+.+..+..++-+..+.....+.+....++....++.-+.+.+...+....  ...         +.+..+...+....+
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            666666655556666666655555555677777777776666666554443  211         112345666777777


Q ss_pred             HHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (381)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~  156 (381)
                      +..++.+.+.-.+..++-..+++..+.-+.+.+++.+++++++++.||+|+.+.+.|..+-...
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            7778777777778888888888888899999999999999999999999999999999887665

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.33  E-value=0.0036  Score=50.29  Aligned_cols=71  Identities=14%  Similarity=0.190  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           87 LLLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        87 ~~~g~~~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      .+.-.+.....++...++++.|.+.+. +......+.+.+.+.++++|++++.|++|+.+.++|++.+-..+
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            333344444567778999999997664 44678899999999999999999999999999999999886543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.30  E-value=0.0039  Score=48.48  Aligned_cols=66  Identities=15%  Similarity=0.168  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHhhccchh-hHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869           90 GFVDVQGNFLFNKAFQFTSIS-SVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (381)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~-~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~  155 (381)
                      -++.....++.-.++++.|.+ .+++......+.+.+.+++++||+++..+++++.+.+.|++.+-.
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            333344466668999999995 557888889999999999999999999999999999999988743

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.27  E-value=0.0031  Score=49.94  Aligned_cols=63  Identities=8%  Similarity=0.074  Sum_probs=47.7

Q ss_pred             HHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          284 MFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       284 ~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      ..+.++..++++.+.. .-++..-...+.+.+.++++|||++++.+++|..+++.|+++.+...
T Consensus        42 ~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3446667788884433 33343434448889999999999999999999999999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.27  E-value=0.0057  Score=47.93  Aligned_cols=68  Identities=16%  Similarity=0.099  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhh-HHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869           87 LLLGFVDVQGNFLFNKAFQFTSISS-VTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus        87 ~~~g~~~~~~~~~~~~al~~~~~~~-~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      +..-.+.....++...+++..|.+. +++-.....+.+.+.+.+++||++++.|++|+.+.++|++.+-
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3333344444667789999999954 4677778999999999999999999999999999999999873

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.26  E-value=0.0018  Score=60.82  Aligned_cols=60  Identities=15%  Similarity=0.177  Sum_probs=44.3

Q ss_pred             HHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          287 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       287 ~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      .+-..++...++.+..-.....-++..+++..++||+++..++.|+.+++.|..+.....
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            333446666444444433444558999999999999999999999999999988766543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.17  E-value=0.0075  Score=47.74  Aligned_cols=64  Identities=16%  Similarity=0.307  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869           93 DVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (381)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~  156 (381)
                      .....++...+++..|.+.+. +......+.+.+.+++++||++++.|++|+.+.++|++.+-..
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            333456668899999996654 5567888999999999999999999999999999999998544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.15  E-value=0.0058  Score=56.00  Aligned_cols=64  Identities=11%  Similarity=0.091  Sum_probs=56.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHH
Q 016869           80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGA  143 (381)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi  143 (381)
                      ++..++-++.|++...+|.+++.|.+..+.+.+-.+.++.++...+.+.+++||+-+++++..+
T Consensus       192 ~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~  255 (269)
T PF06800_consen  192 EKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT  255 (269)
T ss_pred             ccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence            3445567888999999999999999999999999999999999999999999999998876543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.07  E-value=0.012  Score=52.74  Aligned_cols=104  Identities=13%  Similarity=-0.008  Sum_probs=75.5

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhhccchhhHHHH---HHHHHHHHHHHHHH-HHHhhccchhhHHHhhcChhHHHHHH
Q 016869           51 DAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWY---LLLGFVDVQGNFLF-NKAFQFTSISSVTLLDCCAIPCAIVF  126 (381)
Q Consensus        51 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~-~~al~~~~~~~~~il~~~~pi~~~ll  126 (381)
                      .+.-.-...-+.+++++.+|+........-.++..+   +..+++.....+.. ..++...|......+.++.|.+.++.
T Consensus       174 ~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~  253 (292)
T COG5006         174 EHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALS  253 (292)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHH
Confidence            344455667888999999998775543322222111   22233333333333 78999999999999999999999999


Q ss_pred             HHHHhcccccHHHHHHHHHHHhhhHHhh
Q 016869          127 TWVFLGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus       127 s~~~l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      ++++++|+++..||+++...+.+.+=..
T Consensus       254 G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         254 GLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            9999999999999999998887766443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.94  E-value=0.028  Score=46.44  Aligned_cols=124  Identities=19%  Similarity=0.231  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc-c---c-hhhHHHHHHHHHHHHHHHHHHH
Q 016869           27 LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-R---L-QVSWYWYLLLGFVDVQGNFLFN  101 (381)
Q Consensus        27 ~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~---~-~~~~~~~~~~g~~~~~~~~~~~  101 (381)
                      ++.+...+.+..+.....+.+. ..+|...++..+....+.+..+....++ .   . +.+| +...-|+++...-....
T Consensus         5 la~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~~~V~~~~   82 (138)
T PF04657_consen    5 LALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGVFFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHHHHHHHHH
Confidence            3344444445555566666654 2368999999999988888776654443 1   2 2344 44557888877777778


Q ss_pred             HHhhccchhhHH-HhhcChhHHHHHHHHH----HhcccccHHHHHHHHHHHhhhHH
Q 016869          102 KAFQFTSISSVT-LLDCCAIPCAIVFTWV----FLGTRYSVWQLFGASLCVLGLGL  152 (381)
Q Consensus       102 ~al~~~~~~~~~-il~~~~pi~~~lls~~----~l~er~~~~~~~gi~l~~~Gv~l  152 (381)
                      ......+++... ....-+.+...++.++    .-|++++++|.+|+.+.++|+.+
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            888888885554 3445555666666654    35799999999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.93  E-value=0.0081  Score=46.75  Aligned_cols=63  Identities=13%  Similarity=0.188  Sum_probs=48.8

Q ss_pred             HHHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          284 MFYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       284 ~~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      ..|.+...++|+.+ .+.-++..-.-.+.+.+.++++|||+.++.+++|..+++.|++..+..+
T Consensus        42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            34466677888844 3333445555558899999999999999999999999999999887643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.88  E-value=0.053  Score=44.83  Aligned_cols=131  Identities=15%  Similarity=0.170  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccccc
Q 016869          171 GDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAFIP  249 (381)
Q Consensus       171 G~ll~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  249 (381)
                      ..+++++++..-++....+.++.++.+ +..........+.+...+..                                
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~--------------------------------   49 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIIL--------------------------------   49 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence            357889999999999999999988876 77777666666666654332                                


Q ss_pred             CCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhHHH-HHhHHHHHHHHHHHHH----hhcccc
Q 016869          250 LPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATMLI-LSVLTSDMWAVILRIF----CYHQQV  324 (381)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~-~~~~~~pv~a~i~~~~----~~~e~~  324 (381)
                           ...+..+.....  ...|..+++-.. ...+-......+++.++..+. ....-+-+.+.+++.+    .-++++
T Consensus        50 -----~~~~~~~~~~~~--~~p~w~~lGG~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~  121 (138)
T PF04657_consen   50 -----LITGRPSLASLS--SVPWWAYLGGLL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF  121 (138)
T ss_pred             -----HHhcccccchhc--cCChHHhccHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC
Confidence                 111111222111  112333334333 222335556677776665554 4555666888888876    455789


Q ss_pred             cHHHHHHHHHHHhhhhh
Q 016869          325 NWTYYLAFAAVLIGLII  341 (381)
Q Consensus       325 t~~~~iG~~lil~G~~l  341 (381)
                      ++.+++|.++++.|+++
T Consensus       122 ~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  122 SLRRILGLALMIAGVIL  138 (138)
T ss_pred             CHHHHHHHHHHHHHHhC
Confidence            99999999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.87  E-value=0.012  Score=46.18  Aligned_cols=61  Identities=16%  Similarity=0.133  Sum_probs=46.9

Q ss_pred             HHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecC
Q 016869          285 FYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  345 (381)
Q Consensus       285 ~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~  345 (381)
                      .+.+...++|+.+ +..-++..-.-.+.+.+.++++|||++++.+++|..+++.|++..+..
T Consensus        42 sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         42 SMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            3456667777733 333344444555889999999999999999999999999999987653

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.85  E-value=0.025  Score=44.64  Aligned_cols=59  Identities=10%  Similarity=0.099  Sum_probs=45.6

Q ss_pred             HHHHHHhhhhcch-hhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhee
Q 016869          285 FYTLVPFVLKLSG-ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  343 (381)
Q Consensus       285 ~~~l~~~~l~~~~-a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~  343 (381)
                      .+.+...++|+.+ ...-++..-.-.+.+.+.++++|||++++.+++|..+++.|++..+
T Consensus        48 sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         48 AFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4466677787733 3333444445558889999999999999999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.77  E-value=0.018  Score=54.81  Aligned_cols=145  Identities=17%  Similarity=0.111  Sum_probs=90.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhcccccccccccccccccc
Q 016869          167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFA  246 (381)
Q Consensus       167 ~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~  246 (381)
                      +...|.++.+++++|++...+-+|+ .|+-+ .|.. |. ..+. +..+. .|+...++.++                  
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~-W~-v~gi-~~wl~-~~~~~g~~~~~------------------   59 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETM-WS-VGGI-FSWLI-LPWLIAALLLP------------------   59 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHH-HH-HHHH-HHHHH-HHHHHHHHHhh------------------
Confidence            4568999999999999999998887 44333 3444 32 2233 32222 24433333222                  


Q ss_pred             cccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccc-
Q 016869          247 FIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQV-  324 (381)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~-  324 (381)
                              ...+.  ..+.  +...+......+.....++..+..++++.+.. ..++..-+.-+.+.+++.+++||-. 
T Consensus        60 --------~f~~~--~~~~--~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~  127 (345)
T PRK13499         60 --------DFWAY--YSSF--SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDV  127 (345)
T ss_pred             --------hHHHH--HHhc--CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccc
Confidence                    11111  1111  22222222222333566778899999996644 5557777777999999999999754 


Q ss_pred             ------cHHHHHHHHHHHhhhhheecCCC
Q 016869          325 ------NWTYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       325 ------t~~~~iG~~lil~G~~l~~~~~~  347 (381)
                            ...-++|.+++++|+.+..+...
T Consensus       128 ~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499        128 LLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence                  23577899999999999988443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.65  E-value=0.011  Score=53.81  Aligned_cols=66  Identities=21%  Similarity=0.191  Sum_probs=41.8

Q ss_pred             HHHHHHHhhhhcchhhHHHH-HhHHHHHHHHHHHHH-hhcccc-----cHHHHHHHHHHHhhhhheecCCCCC
Q 016869          284 MFYTLVPFVLKLSGATMLIL-SVLTSDMWAVILRIF-CYHQQV-----NWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       284 ~~~~l~~~~l~~~~a~~~~~-~~~~~pv~a~i~~~~-~~~e~~-----t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      .++.+..-+++..+-.+... .....-+.+-..+-+ +||++.     .+..++|.+++++|..++..-+.+.
T Consensus        67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            34445555677766555553 334454555555544 565543     4579999999999999998755443

The region concerned is approximately 280 residues long.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.52  E-value=0.025  Score=51.58  Aligned_cols=68  Identities=7%  Similarity=0.176  Sum_probs=60.6

Q ss_pred             HHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          282 SFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      -...+.+.+.++++.++.+-.+......+++.+++++++|.+++..||++..+..+|+.+.+......
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            44566788889999999999999999999999999999999999999999999999999998866554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.29  E-value=0.0044  Score=55.84  Aligned_cols=60  Identities=12%  Similarity=0.184  Sum_probs=52.8

Q ss_pred             HHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          287 TLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       287 ~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      .+.++++++.+-.-+++.....|+++.++++.+++|+.|..+.+|..+.+.|+++..+..
T Consensus       112 mlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  112 MLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             HHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            455667788777777877888899999999999999999999999999999999998755

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.19  E-value=1.2  Score=42.21  Aligned_cols=111  Identities=16%  Similarity=0.249  Sum_probs=73.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccchhhHH-HhhcChhHHHHHHHHHHhc-------ccccHHHHHHHHHHHhhhHH
Q 016869           81 VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLG-------TRYSVWQLFGASLCVLGLGL  152 (381)
Q Consensus        81 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~-il~~~~pi~~~lls~~~l~-------er~~~~~~~gi~l~~~Gv~l  152 (381)
                      .......+.|++-..+...+-.+..|...+..+ +...+.-++-.++-.++.+       ++-.....+|++++++|+++
T Consensus        71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai  150 (344)
T PF06379_consen   71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI  150 (344)
T ss_pred             hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence            345566777888888888887888887775432 3233333333344333322       33345788999999999999


Q ss_pred             hhccccc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 016869          153 MLLSDAE-----MAGGGGSRPLLGDILVIAGAIFFAMSYVGEEF  191 (381)
Q Consensus       153 ~~~~~~~-----~~~~~~~~~~~G~ll~l~a~~~~a~~~v~~~~  191 (381)
                      ....+..     +++..+.+...|.++++++++..|..++-.+.
T Consensus       151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a  194 (344)
T PF06379_consen  151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA  194 (344)
T ss_pred             HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence            9876543     11122234468999999999999999886654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.11  E-value=0.045  Score=41.93  Aligned_cols=55  Identities=15%  Similarity=0.151  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHhhccchhhH-HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHH
Q 016869           92 VDVQGNFLFNKAFQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLC  146 (381)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~-~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~  146 (381)
                      +.....++...++++.|.+.+ .+......+.+.+.+..++||+++..|+.|+.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            334445667899999999766 5566789999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.03  E-value=0.028  Score=52.89  Aligned_cols=137  Identities=14%  Similarity=0.125  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCchhHHHHHHHHHHHHHHH-HHHHhhhccc---------hhhHHHHHH
Q 016869           21 TLYLLLLGQLVSFSLALSSFTTAVITD--LGVDAPITQSVLCYLSLALAYG-GILLYRRQRL---------QVSWYWYLL   88 (381)
Q Consensus        21 ~~~~~~~~~l~a~~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~---------~~~~~~~~~   88 (381)
                      ++.|+..++...+..+.-+.+.+.+.+  ....++......---++.+.++ |+.....+..         .........
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            566777777776666666777765553  3445666666555557777777 7655432211         111223334


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           89 LGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        89 ~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      .+.+....|...+..+..+++-..++.....=+.+...++++++++.++.+.+|..++++|+.+-....
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            446666668888999999999999998888888888999999999999999999999999999876543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.94  E-value=0.016  Score=45.91  Aligned_cols=69  Identities=17%  Similarity=0.264  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHHHh-hcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869           85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (381)
Q Consensus        85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~  153 (381)
                      ++.+.=.++..++..+++.+...+.+.+..+ +++.=++|++.++++.+|..++++++|+.+.+.|+.+.
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            4444455677778889999999999888776 58888999999988888888889999999999998764

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.66  E-value=0.36  Score=40.17  Aligned_cols=131  Identities=13%  Similarity=0.123  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhccc-----hhhHHHHHHHHHHHHHHH
Q 016869           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL-----QVSWYWYLLLGFVDVQGN   97 (381)
Q Consensus        23 ~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~   97 (381)
                      ..++.+.+...+....+.+...+.+.. .+|+..++..+....+.+..+.+.++++.     .+..|+...-|.++...-
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~-~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYL-GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence            444555555556666677777777754 37899999999988888777665543211     122334444555444443


Q ss_pred             HHHHHHhhccch-hhHHHhhcChhHHHHHHHHHH----hcccccHHHHHHHHHHHhhhHHhh
Q 016869           98 FLFNKAFQFTSI-SSVTLLDCCAIPCAIVFTWVF----LGTRYSVWQLFGASLCVLGLGLML  154 (381)
Q Consensus        98 ~~~~~al~~~~~-~~~~il~~~~pi~~~lls~~~----l~er~~~~~~~gi~l~~~Gv~l~~  154 (381)
                      +..........+ .....+.+.+.+..+++-.+=    -+++++..+++|+++.++|+.++.
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            333444455555 333344455555555544322    258889999999999999954443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.51  E-value=0.66  Score=38.65  Aligned_cols=138  Identities=13%  Similarity=0.142  Sum_probs=77.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccccc
Q 016869          169 LLGDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPFAF  247 (381)
Q Consensus       169 ~~G~ll~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~  247 (381)
                      ....+.+++++.+-.+..-.+.++.+..+ +.......+..|+....+..                              
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~------------------------------   53 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILL------------------------------   53 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH------------------------------
Confidence            45678889999999999999998888776 44444444445555543322                              


Q ss_pred             ccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhhH-HHHHhHHHHHHHHHHHHHhhc----c
Q 016869          248 IPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGATM-LILSVLTSDMWAVILRIFCYH----Q  322 (381)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~~-~~~~~~~~pv~a~i~~~~~~~----e  322 (381)
                             ...+..+..+...+ ..|..+++-.. ...+-+.-.....+.+++. ..+...-+.+.+++++-+=+.    .
T Consensus        54 -------l~~~~~~~~a~~~~-~pwW~~~GG~l-Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~  124 (150)
T COG3238          54 -------LIKQGHPGLAAVAS-APWWAWIGGLL-GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKR  124 (150)
T ss_pred             -------HHhcCCCchhhccC-CchHHHHccch-hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcC
Confidence                   11111111111111 11222333222 1112123334455555443 334555566778888776555    5


Q ss_pred             cccHHHHHHHHHHHhhhhheecC
Q 016869          323 QVNWTYYLAFAAVLIGLIIYSTT  345 (381)
Q Consensus       323 ~~t~~~~iG~~lil~G~~l~~~~  345 (381)
                      ++++..++|.+++++|+++.+..
T Consensus       125 ~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238         125 PLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccc
Confidence            78999999999999996665543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.44  E-value=0.067  Score=40.97  Aligned_cols=53  Identities=8%  Similarity=0.157  Sum_probs=28.4

Q ss_pred             HHHHHHHHhhhhcchhhHH-HHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Q 016869          283 FMFYTLVPFVLKLSGATML-ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV  335 (381)
Q Consensus       283 ~~~~~l~~~~l~~~~a~~~-~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~li  335 (381)
                      ...+.++.+++|+.+..++ ++..-...+...+.+.++|||++|+.+++|..+|
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3344677888998554444 4444455688999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=95.09  E-value=0.22  Score=44.60  Aligned_cols=64  Identities=14%  Similarity=0.257  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhH
Q 016869           88 LLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG  151 (381)
Q Consensus        88 ~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~  151 (381)
                      ...+.......+....+++.+.....+...+.++++.+++.++++|+++..+++|+.+.+.|+.
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            3344444556667888899999999999999999999999999999999999999999988865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.05  E-value=0.61  Score=41.55  Aligned_cols=77  Identities=13%  Similarity=0.165  Sum_probs=65.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhcc
Q 016869           80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (381)
Q Consensus        80 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~  156 (381)
                      +..|+.+.++++...+++++.+.-..+-++-.-+++..+.-+|+.+.+.++++..++.+||+|..+.+.|...=...
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD  314 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence            56678889999999999999888887777766667778888999999999999999999999999998887655443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.84  E-value=0.55  Score=43.45  Aligned_cols=120  Identities=14%  Similarity=0.100  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhh---------ccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 016869           36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---------QRLQVSWYWYLLLGFVDVQGNFLFNKAFQF  106 (381)
Q Consensus        36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~  106 (381)
                      +..+.....+.+.-...++.+.+.--+..++.-.....-..         .+.+.-++.+++.+.++..++.+-++-++.
T Consensus       185 gfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~  264 (327)
T KOG1581|consen  185 GFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIER  264 (327)
T ss_pred             hhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhh
Confidence            34455555555555556666665555554444333332211         122466788899999999998887777755


Q ss_pred             cchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhc
Q 016869          107 TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (381)
Q Consensus       107 ~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~  155 (381)
                      -++-..+.+..+-=+++++++.+.++.++++.||.|+.+.+.|+.+=..
T Consensus       265 FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  265 FGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            5554445555667789999999999999999999999999988876544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.76  E-value=0.24  Score=39.20  Aligned_cols=56  Identities=11%  Similarity=0.177  Sum_probs=43.7

Q ss_pred             HHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhe
Q 016869          287 TLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  342 (381)
Q Consensus       287 ~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~  342 (381)
                      ..|++.+++.+-+ ..++.+.+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus        56 v~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   56 VLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            5556677775544 4446666677999999999888888999999999999998653

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=92.93  E-value=0.097  Score=46.87  Aligned_cols=66  Identities=15%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             HHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhcccccHHHHH----HHHHHHhhhhheecCCC
Q 016869          282 SFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYHQQVNWTYYL----AFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~i----G~~lil~G~~l~~~~~~  347 (381)
                      ...+|...+++++..+.. ..+++.-++-+-+.+++++.|||..+..+++    ..++++.|..+..+.++
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            556778999999996655 4457888888889999999999999887654    45677788877766554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=92.90  E-value=0.41  Score=45.54  Aligned_cols=77  Identities=13%  Similarity=0.075  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          273 LSFVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       273 ~~~~~~~~~~~~~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      -.-+.+++..+.++..++.+++..+..-..+...+.-+|+..++..+-+|++|+...++..+-+.|+++....+.++
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            34555666688899999999999766655655555559999999999999999999999999999999999887655

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.43  E-value=0.13  Score=46.68  Aligned_cols=148  Identities=14%  Similarity=0.115  Sum_probs=98.9

Q ss_pred             ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhhhc--------cc
Q 016869           11 WSGRSQM---ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--------RL   79 (381)
Q Consensus        11 ~~~~~~~---~~~~~~~~~~~~l~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--------~~   79 (381)
                      |-|-+|.   ..-.+.|+++|.+.++..+.-+..++.........-+.++++.-+.+.++++|.......        +.
T Consensus       170 ~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l  249 (347)
T KOG1442|consen  170 GLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHL  249 (347)
T ss_pred             eeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccc
Confidence            3344444   334578999999999888888777764444344456778888888899988887664321        11


Q ss_pred             --hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           80 --QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        80 --~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                        .+.|..+.+.|++++..++...+=++.+++-...+=....-..-.+++..+++|..+...|-+..+.++|..+-....
T Consensus       250 ~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  250 PAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence              234555556666666666665555566666333332233345556788899999999999988888888887776654


Q ss_pred             c
Q 016869          158 A  158 (381)
Q Consensus       158 ~  158 (381)
                      .
T Consensus       330 ~  330 (347)
T KOG1442|consen  330 E  330 (347)
T ss_pred             H
Confidence            3

>PRK02237 hypothetical protein; Provisional

Probab=91.85  E-value=3.8  Score=31.95  Aligned_cols=41  Identities=22%  Similarity=0.703  Sum_probs=34.7

Q ss_pred             cChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869          117 CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus       117 ~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ....+.+.+..+..-|+|+++..++|..++++|+.++...+
T Consensus        67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            34456667888999999999999999999999999887653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.84  E-value=1.1  Score=42.30  Aligned_cols=147  Identities=15%  Similarity=0.122  Sum_probs=77.2

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHhhcccccccchhccccccccccccccccc
Q 016869          166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLYPFLLGDMITFTYNKLYTSLCGMIKFPF  245 (381)
Q Consensus       166 ~~~~~G~ll~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~  245 (381)
                      +.-..|.++-.+++++.+.+.+=.||. |+-+...+=..+++++-++.     |.......+|                 
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~-----P~~~a~l~ip-----------------   59 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIV-----PWLWALLAIP-----------------   59 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHH-----HHHHHHHhCC-----------------
Confidence            345689999999999999999966654 33332222222333333332     5444333333                 


Q ss_pred             ccccCCcccchhccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhcchhh-HHHHHhHHHHHHHHHHHHHhhc---
Q 016869          246 AFIPLPSFRSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLKLSGAT-MLILSVLTSDMWAVILRIFCYH---  321 (381)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~a~-~~~~~~~~~pv~a~i~~~~~~~---  321 (381)
                               +..+.  +.+.+.+...+..+.+  .....+...+-.++|+.+-. ..++..-+.-+++.++.-++.|   
T Consensus        60 ---------~~~~i--~~~~~~~~l~~~~l~G--~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~  126 (344)
T PF06379_consen   60 ---------DFFSI--YSATPASTLFWTFLFG--VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFD  126 (344)
T ss_pred             ---------cHHHH--HHhCChhHHHHHHHHH--HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccc
Confidence                     11111  1111212221112222  22233335556678885533 3334444444666666545433   


Q ss_pred             ----ccccHHHHHHHHHHHhhhhheecCCCC
Q 016869          322 ----QQVNWTYYLAFAAVLIGLIIYSTTAKD  348 (381)
Q Consensus       322 ----e~~t~~~~iG~~lil~G~~l~~~~~~~  348 (381)
                          ++-....++|.+++++|+.+..+....
T Consensus       127 ~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen  127 ELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             ccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence                233457889999999999999876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.16  E-value=0.074  Score=49.47  Aligned_cols=45  Identities=18%  Similarity=0.132  Sum_probs=37.3

Q ss_pred             hHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCCCC
Q 016869          305 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  349 (381)
Q Consensus       305 ~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~~~  349 (381)
                      ..+..+.+.+++..+++|++++.-.+|++++++|..+......++
T Consensus        97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            334458889999999999999999999999999988777655443

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=90.17  E-value=3.4  Score=32.13  Aligned_cols=45  Identities=22%  Similarity=0.659  Sum_probs=37.6

Q ss_pred             HHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869          113 TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus       113 ~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      +.--....+.+.+..+.+-|+|+++..++|..++++|+.++...+
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            333345567788889999999999999999999999999988764

; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=88.31  E-value=0.72  Score=39.97  Aligned_cols=63  Identities=16%  Similarity=0.083  Sum_probs=54.2

Q ss_pred             HHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCCC
Q 016869          285 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  347 (381)
Q Consensus       285 ~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~~  347 (381)
                      .+.+|..++++.+++.++....-..-+..+++++++||++....++..++.+.|+++..+.+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            446777889998888888766666799999999999999999999999999999999887654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=87.94  E-value=11  Score=35.18  Aligned_cols=132  Identities=14%  Similarity=0.104  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCchhHHHHHHHHHHHHHHHHHHHhh-hcc------------chhhHHH
Q 016869           22 LYLLLLGQLVSFSLALSSFTTAVITDLG---VDAPITQSVLCYLSLALAYGGILLYR-RQR------------LQVSWYW   85 (381)
Q Consensus        22 ~~~~~~~~l~a~~~~~~~~~~~~l~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~------------~~~~~~~   85 (381)
                      ..|..+....+.+.+.=|.+++.+.+++   ..+|+...+----...+.++|..+.- +..            ....++.
T Consensus       163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv  242 (349)
T KOG1443|consen  163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV  242 (349)
T ss_pred             ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence            3456666666777777788888777653   35666654444334444444443321 110            0112333


Q ss_pred             HHHHHHHHHHHHHH---HHHHhhccchhhHHHhhcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHh
Q 016869           86 YLLLGFVDVQGNFL---FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (381)
Q Consensus        86 ~~~~g~~~~~~~~~---~~~al~~~~~~~~~il~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~  153 (381)
                      ...++..+.....+   -+.=+..++.-..++..-..=+.+.+++..+.+++++-..|.|..++..|+..=
T Consensus       243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            33333333332111   133444455533333333445788899999999999999999999999999877

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=85.36  E-value=2.6  Score=40.01  Aligned_cols=61  Identities=10%  Similarity=0.135  Sum_probs=54.5

Q ss_pred             HHHHHHhhhhcchhhHHHHHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecC
Q 016869          285 FYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  345 (381)
Q Consensus       285 ~~~l~~~~l~~~~a~~~~~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~  345 (381)
                      .|.+.+.++...++.+-.+.+.+....+.+++.++++++.++.||....+...|+.+.+..
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            3457777888888999999999998999999999999999999999999999999999843

>PRK02237 hypothetical protein; Provisional

Probab=82.86  E-value=11  Score=29.43  Aligned_cols=40  Identities=8%  Similarity=0.022  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          307 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       307 ~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      .-.+.++++.+.+-|++|+...++|..++++|+.+.....
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            4448889999999999999999999999999998876654

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=81.58  E-value=10  Score=29.57  Aligned_cols=40  Identities=10%  Similarity=0.046  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          307 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       307 ~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      .-.+.+.++++.+-|++|+...++|..++++|+.+....+
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            4458899999999999999999999999999998887754

; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	381
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.63
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.31
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.14
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.12

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.63  E-value=3.2e-08  Score=80.45  Aligned_cols=65  Identities=9%  Similarity=0.061  Sum_probs=46.4

Q ss_pred             HHHHHHHHHhhhhcchhhHHHHH-hHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          282 SFMFYTLVPFVLKLSGATMLILS-VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~~~-~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      ...+|.++.+++++.+..++... ..+.|+++++++++++||++++.+++|+++|++|+++.+..+
T Consensus        40 ~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45566899999999887777654 788899999999999999999999999999999999998654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.31  E-value=7.4e-06  Score=64.03  Aligned_cols=67  Identities=15%  Similarity=0.303  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHh-hcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           91 FVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      ++.....+++..++++.|.+.+..+ ..+.|+++.+++++++||++++.|++|+.+.+.|++.+...+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3334456777889999999988777 899999999999999999999999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.14  E-value=1.1e-05  Score=63.03  Aligned_cols=65  Identities=9%  Similarity=0.074  Sum_probs=55.4

Q ss_pred             HHHHHHHHHhhhhcchhhHHH-HHhHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhheecCC
Q 016869          282 SFMFYTLVPFVLKLSGATMLI-LSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  346 (381)
Q Consensus       282 ~~~~~~l~~~~l~~~~a~~~~-~~~~~~pv~a~i~~~~~~~e~~t~~~~iG~~lil~G~~l~~~~~  346 (381)
                      ...++.++.+++|+.+..++- +.....|+++.+++++++||++|+.+++|..+|+.|+++.+..+
T Consensus        40 ~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455668888899997777665 44678889999999999999999999999999999999987643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.12  E-value=7.6e-06  Score=66.38  Aligned_cols=68  Identities=15%  Similarity=0.277  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHh-hcChhHHHHHHHHHHhcccccHHHHHHHHHHHhhhHHhhccc
Q 016869           90 GFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (381)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~~~lls~~~l~er~~~~~~~gi~l~~~Gv~l~~~~~  157 (381)
                      .++.....++++.++++.+++.+..+ .++.|++++++++++++|++++.|++|+.+.++|++++...+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33444457778999999999988777 899999999999999999999999999999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00