Citrus Sinensis ID: 016904

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Protein Sequence
MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAPLIASSRLSHIGRTQVSNHGV
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccEEEEcccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccc
Coil and Loop (DISEMBL)
MKMMINKPLVLTYLYLLIYILLSSGVIlynkwvlspkyfnfpfpiTLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQkkgltlnpitslyyiapcsfvflfvpwyllekpmmevsQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALStvifpestitgLNIIGYAIALCGVVMYNYIKvkdvrassqlpaesipdrIAKDwklekkssdifnpnnssdnnggninsepqideeaplIASSRLshigrtqvsnhgv
Flexible Loop (DISEMBL)
MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDvrassqlpaesipdriakDWKLEKKSsdifnpnnssdnngGNINSEPQIDEEAPLIASsrlshigrtqvsnhgv
Low Complexity Region (SEG)
MKMMINKPlvltylylliyillssgvilyNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQLPAESIPDRIAKDWKLEKKssdifnpnnssdnnggninsEPQIDEEAPLIASSRLSHIGRTQVSNHGV
Disordered region (IsUnstruct)
****INKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVR************************************************************************
Disordered Region (DISOPRED)
************YLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN********************************************************************************
Disordered Region (DISEMBL)
MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAPLIASSRLSHIGR********
Disordered Region (DISPRO)
*KMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRA*********************************************************LS************
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAPLIASSRLSHIGRTQVSNHGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	380	2.2.26 [Sep-21-2011]
Q9LRP2	375	Probable sugar phosphate/	yes	no	0.978	0.992	0.855	1e-180
Q9LNH5	367	Probable sugar phosphate/	no	no	0.957	0.991	0.830	1e-165
Q9SUV2	350	Probable sugar phosphate/	no	no	0.886	0.962	0.457	3e-84
Q3E6T0	349	Probable sugar phosphate/	no	no	0.878	0.957	0.442	2e-83
Q9C8M1	332	Probable sugar phosphate/	no	no	0.802	0.918	0.501	2e-83
Q9LFN3	351	Probable sugar phosphate/	no	no	0.876	0.948	0.457	3e-83
Q9SKJ7	347	Probable sugar phosphate/	no	no	0.876	0.959	0.469	1e-82
Q94EI9	340	Probable sugar phosphate/	no	no	0.813	0.908	0.496	7e-79
Q9SFE9	341	GDP-mannose transporter G	no	no	0.776	0.865	0.288	2e-26
Q6DBP3	309	Probable sugar phosphate/	no	no	0.728	0.896	0.304	4e-25

>sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=2 SV=1

 Score =  630 bits (1624), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 326/381 (85%), Positives = 348/381 (91%), Gaps = 9/381 (2%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           M  MINK LVLTY+YLLIYI+LSSGVILYNKWVLSPKYFNFP PITLTMIHMGF+G VAF
Sbjct: 1   MAKMINKTLVLTYIYLLIYIILSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFAGFVAF 60

Query: 61  FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
            L+RVFKVV+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct: 61  LLIRVFKVVAPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120

Query: 121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
           F MAV+CGTDK R DVF NM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQ
Sbjct: 121 FIMAVVCGTDKPRCDVFSNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQ 180

Query: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
           VLLQKKGLTLNPITSLYYIAPCSFVFL +PWY+LEKP MEVSQIQFNFWIFFSNALCALA
Sbjct: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLALPWYVLEKPTMEVSQIQFNFWIFFSNALCALA 240

Query: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
           LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI GYAIALCGVVMYN
Sbjct: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNITGYAIALCGVVMYN 300

Query: 301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSD--NNGGNINSEPQIDEE 358
           YIKV+DV+A SQ  A+S+PDRI K++K+EKKSSD FNPN+S +    GG +N     DEE
Sbjct: 301 YIKVRDVKA-SQPTADSLPDRINKEYKMEKKSSDKFNPNDSVEIPRVGGEVN-----DEE 354

Query: 359 APLIASSRLSHIGRTQVSNHG 379
           APLI +SRLSHIGRTQ+ NH 
Sbjct: 355 APLI-TSRLSHIGRTQLGNHA 374

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2

 Score =  581 bits (1498), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/378 (83%), Positives = 336/378 (88%), Gaps = 14/378 (3%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           M  MINK LVLTY+YLLIYI+LSSGVILYNKWVLSPKYFNFP PITLTMIHMGFSG VAF
Sbjct: 1   MAKMINKTLVLTYIYLLIYIILSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGFVAF 60

Query: 61  FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
            L+RVFKVVSPVKMTFEIY TCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct: 61  LLIRVFKVVSPVKMTFEIYVTCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120

Query: 121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
           F MAV+CGTDKAR DVF+NMVLVSVGVV+SSYGEI+FN++GT+YQV GI AEALRLVLTQ
Sbjct: 121 FLMAVVCGTDKARCDVFMNMVLVSVGVVVSSYGEINFNVIGTVYQVMGIFAEALRLVLTQ 180

Query: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
           VLLQKKGLTLNP+TSLYYIAPCSFVFL +PWY+LEKP ++VSQIQFNFWIFFSNALCALA
Sbjct: 181 VLLQKKGLTLNPVTSLYYIAPCSFVFLSLPWYVLEKPNIDVSQIQFNFWIFFSNALCALA 240

Query: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
           LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI GYAIALCGVVMYN
Sbjct: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNITGYAIALCGVVMYN 300

Query: 301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAP 360
           YIK+KDV+A  Q   +S+PDRI KDWK EK SSD  +P     N           DEEAP
Sbjct: 301 YIKIKDVKA-IQPTTDSLPDRITKDWK-EKNSSDGGSPRGLELN-----------DEEAP 347

Query: 361 LIASSRLSHIGRTQVSNH 378
           LI +SRLSHIGRTQ+ NH
Sbjct: 348 LI-TSRLSHIGRTQLGNH 364

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1

 Score =  312 bits (799), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 155/339 (45%), Positives = 226/339 (66%), Gaps = 2/339 (0%)

Query: 7   KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVF 66
           K ++L+Y Y+ I+I LS  VI+YNK++L  K +N+PFPITLTMIHM F   +A  L++VF
Sbjct: 13  KKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVF 72

Query: 67  KVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVL 126
           K+V PV M+ + Y   VVPI A ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL
Sbjct: 73  KIVEPVSMSRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVL 132

Query: 127 CGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKK 186
              +  + +   NM+ +S GV I++YGE  F+  G + Q+  +  EA RLVL Q+LL  K
Sbjct: 133 LKKESFKSETMTNMLSISFGVAIAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSK 192

Query: 187 GLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSI 245
           G+ LNPITSLYY+APC  VFLF PW  +E P++ E S   F+F IF +N++CA ALN ++
Sbjct: 193 GINLNPITSLYYVAPCCLVFLFFPWIFVELPILRETSSFHFDFVIFGTNSVCAFALNLAV 252

Query: 246 FLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK 305
           FL++G+T A+T+ VAGV+KDW+LIA S  +  + T+T LN+ GY +A  GV  YN+ K++
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKD-TVTPLNLFGYGLAFLGVAYYNHCKLQ 311

Query: 306 DVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDN 344
            ++A          D       LE++ S+     N +++
Sbjct: 312 ALKAKDAQKKVQQGDEEEAGKLLEERESEAAAKRNETED 350

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score =  309 bits (792), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/350 (44%), Positives = 236/350 (67%), Gaps = 16/350 (4%)

Query: 7   KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVF 66
           K ++++Y Y+ I+I LS  VI+YNK++L  K +++PFPI+LTMIHM F   +AF L++VF
Sbjct: 13  KNIIISYTYVAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVF 72

Query: 67  KVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVL 126
           K V PV M+ + Y   VVPI A ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL
Sbjct: 73  KFVEPVSMSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVL 132

Query: 127 CGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKK 186
              +  + +  +NM+ +S GV I++YGE  F++ G + Q+  +  EA RLV+ Q+LL  K
Sbjct: 133 FKKEGFKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSK 192

Query: 187 GLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSI 245
           G+TLNPITSLYY+APC   FLF+PW ++E P++ + S   F++ IF +N+ CA ALN ++
Sbjct: 193 GITLNPITSLYYVAPCCLAFLFIPWIVVEFPILRDTSSFHFDYLIFGTNSFCAFALNLAV 252

Query: 246 FLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK 305
           FL++G+T A+T+ VAGV+KDW+LIA S  +  + T+T +N+ GY IA  GV  YN+ K++
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKD-TVTPINLFGYGIAFLGVAYYNHAKLQ 311

Query: 306 DVRA-SSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQ 354
            ++A  +Q  A+ + +   +   LE++            N GG  N EP+
Sbjct: 312 ALKAKEAQKTAQQVDEETGR--LLEEREG----------NEGGRKN-EPE 348

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2

 Score =  309 bits (792), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 221/311 (71%), Gaps = 6/311 (1%)

Query: 11  LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS 70
           +TY  +L+YI LSSG I +NKWVLS K  NFP+P+ LT++HM FS V+ F L +VFKV+ 
Sbjct: 16  VTYASILLYITLSSGQIFFNKWVLSSKEINFPYPLGLTLLHMTFSSVLCFLLTKVFKVMK 75

Query: 71  PVK-MTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGT 129
             + MT EIY T V+PI A FA +LW GNTAYL+I+VAF QMLKA+MPVA F + V  G 
Sbjct: 76  VEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGL 135

Query: 130 DKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLT 189
           +     + L M ++S GV++SSYGE++ N VG +YQ+ GIV+EALRL+L ++L+++KG+ 
Sbjct: 136 EIMSCKMLLIMSVISFGVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKGIK 195

Query: 190 LNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVI 249
           LNP++ +YY++PCS + LF+PW  LEK  M+     F+  +   N+LC  ALN S+FLVI
Sbjct: 196 LNPLSLMYYMSPCSAICLFIPWIFLEKSKMD--TWNFHVLVLSLNSLCTFALNLSVFLVI 253

Query: 250 GRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKD--- 306
            RT A+TIR+AGV+KDW+++ +S ++F E+ +T +N+ GYA+A+ GV  YN  K K+   
Sbjct: 254 SRTSALTIRIAGVVKDWLVVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHKPKNGES 313

Query: 307 VRASSQLPAES 317
           +   SQ P  S
Sbjct: 314 ITLVSQSPKNS 324

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score =  309 bits (791), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 158/345 (45%), Positives = 229/345 (66%), Gaps = 12/345 (3%)

Query: 7   KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVF 66
           K +VL+Y Y+ I+I LS  VI+YNK++L  K +N+PFPI+LTMIHM F   +AF +++VF
Sbjct: 13  KNIVLSYSYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVF 72

Query: 67  KVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVL 126
           K V PVKMT E Y   VVPI A +A SLW  N+AY+++SV+FIQMLKALMPVA + + VL
Sbjct: 73  KFVEPVKMTRETYLRSVVPIGALYALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVL 132

Query: 127 CGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKK 186
              +  + D  +NM+ +S GV I++YGE  F++ G + Q+  +  EA RLVL Q+LL  K
Sbjct: 133 FKKEGFKSDTMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDK 192

Query: 187 GLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSI 245
           G+ LNPITSLYY+APC   FLF+PW  +E P++ + S    ++ IF +N+ CA ALN ++
Sbjct: 193 GIKLNPITSLYYVAPCCLAFLFIPWIYVEFPVLRDTSSFHLDYAIFGANSFCAFALNLAV 252

Query: 246 FLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK 305
           FL++G+T A+T+ VAGV+KDW+LIA S  +  + T+T +N+ GY IA  GV  YN+ K++
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKD-TVTPINLFGYGIAFLGVAYYNHAKLQ 311

Query: 306 DVRASSQL-----PAESIPDRIAKDWKLEKKSSDIFNPNNSSDNN 345
            ++A  +       A+    R+     LE++  D+    N    N
Sbjct: 312 ALKAKEEEKKKIQQADEESGRL-----LEEREGDVEGKKNDQSGN 351

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1

 Score =  307 bits (786), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 159/339 (46%), Positives = 229/339 (67%), Gaps = 6/339 (1%)

Query: 7   KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVF 66
           K ++L+Y Y+ I+I LS  VI+YNK++L  K +N+PFPITLTMIHMGF   +A  L++VF
Sbjct: 13  KKIILSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMGFCSSLAVILIKVF 72

Query: 67  KVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVL 126
           KVV PV M+ E Y   VVPI A ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL
Sbjct: 73  KVVEPVSMSRETYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVL 132

Query: 127 CGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKK 186
              +  +     NM+ +S GV I++YGE  F+  G   Q+  +  EA RLVL Q+LL  K
Sbjct: 133 LKKETFKSQTMTNMLSISFGVAIAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSK 192

Query: 187 GLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSI 245
           G+ LNPITSLYY+APC  VFL VPW  +E P++ + S   F+F IF +N++CA ALN ++
Sbjct: 193 GINLNPITSLYYVAPCCLVFLSVPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAV 252

Query: 246 FLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK 305
           FL++G+T A+T+ VAGV+KDW+LIA S  +  + T+T +N+ GY +A  GV  YN+ K++
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKD-TVTPINLFGYGLAFLGVGYYNHCKLQ 311

Query: 306 DVRA-SSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSD 343
            ++A  +Q   ++  D   K   LE++ S+    N + D
Sbjct: 312 ALKAKDAQKKVQASDDEAGK--LLEERESEA-KRNETQD 347

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1

 Score =  294 bits (753), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 157/316 (49%), Positives = 225/316 (71%), Gaps = 7/316 (2%)

Query: 11  LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS 70
           +TY Y+L+YI LSSG I +NKWVLS K  NFP+P+ LT++HM FS V+ F L +V K+V 
Sbjct: 14  VTYAYILLYIALSSGQIFFNKWVLSSKEINFPYPLGLTLLHMIFSSVLCFLLTKVLKIVK 73

Query: 71  PVK-MTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGT 129
             + MT EIY T V+PI A FA +LW GNTAYL+ISVAF QMLKA+MPVA F + V  G 
Sbjct: 74  VEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGL 133

Query: 130 DKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLT 189
           +     + L M ++S GV+++SYGE++ N +G +YQ+ G+V EALRL+  ++L+++KG+ 
Sbjct: 134 EMMSCRMLLIMSIISFGVLVASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIK 193

Query: 190 LNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQ-IQFNFWIFFSNALCALALNFSIFLV 248
           LNPI+ +YY++PCS + LFVPW  LEK  ++ +    F+F +   N+LC  ALN S+FLV
Sbjct: 194 LNPISLMYYVSPCSAICLFVPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLV 253

Query: 249 IGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVR 308
           I  T A+TIRVAGV+KDW+++ +S ++F ++ +T +N+ GYAIA+ GV  YN  K+K   
Sbjct: 254 ISHTSALTIRVAGVVKDWVVVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEA 313

Query: 309 A---SSQLP--AESIP 319
           +   +++ P  AESIP
Sbjct: 314 SKVVTTETPGDAESIP 329

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 164/309 (53%), Gaps = 14/309 (4%)

Query: 26  VILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVP 85
           VI+ NKW+   +  +F FP++++ +H   S + A+ +++V K+   + +  E     + P
Sbjct: 29  VIIMNKWIF--QKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPEDRWRRIFP 86

Query: 86  ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSV 145
           +S  F  ++  GN +  +I V+F+Q +K+L P  T  +  L         ++ ++V +  
Sbjct: 87  MSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIWASLVPIVG 146

Query: 146 GVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFV 205
           G++++S  E+ FN+ G    + G +A + + +L + LL   G   + I ++YY+AP + +
Sbjct: 147 GILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLH--GYKFDSINTVYYMAPFATM 204

Query: 206 FLFVPWYLLEK-PMMEVSQIQFNFW----IFFSNALCALALNFSIFLVIGRTGAVTIRVA 260
            L +P +LLE+  +++  +   + W    I F++ + A  LNFSIF VI  T AVT  VA
Sbjct: 205 ILGLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVA 264

Query: 261 GVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQLPAESIPD 320
           G LK  + + +S +IF  + I+ +N +G  I L G   Y Y++      S Q P      
Sbjct: 265 GNLKVAVAVFVSWMIF-RNPISPMNAVGCGITLVGCTFYGYVRHM---LSQQQPGTPRTP 320

Query: 321 RIAKDWKLE 329
           R  ++ K+E
Sbjct: 321 RTPRN-KME 328

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  116 bits (290), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 12/289 (4%)

Query: 25  GVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVV 84
           GV+L NK++LS   + F +PI LTM HM    ++++  +   K+V    +   +    + 
Sbjct: 24  GVLLLNKYLLSN--YGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPMQTIRSRVQFFKIA 81

Query: 85  PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVS 144
            +S  F  S+ FGN +   + V+F Q + A  P  T   A L    K     +  +V V 
Sbjct: 82  ALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKEAWLTYFTLVPVV 141

Query: 145 VGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSF 204
            GVVI+S GE  F++ G L  +    A AL+ VL  +LL  +G  LN +  L Y+AP + 
Sbjct: 142 TGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAV 201

Query: 205 VFLFVPWYLLEKPMMEVS------QIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIR 258
           V L     ++EK ++ ++        +  +++ F++AL  L +N + FLV   T A+T++
Sbjct: 202 VLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYL-VNLTNFLVTNHTSALTLQ 260

Query: 259 VAGVLKDWILIALSTVIFPES-TITGLNIIGYAIALCGVVMYNYIKVKD 306
           V G  K  + + +S +IF    ++TG+  +GY++ +CGV++Y+  K ++
Sbjct: 261 VLGNAKGAVAVVVSILIFKNPVSVTGM--LGYSLTVCGVILYSEAKKRN 307

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	380
356530491	384	PREDICTED: probable sugar phosphate/phos	0.986	0.976	0.889	0.0
356556468	384	PREDICTED: probable sugar phosphate/phos	0.986	0.976	0.881	0.0
255647687	384	unknown [Glycine max]	0.986	0.976	0.884	0.0
359477637	383	PREDICTED: probable sugar phosphate/phos	0.986	0.979	0.856	0.0
449460393	416	PREDICTED: probable sugar phosphate/phos	0.981	0.896	0.896	0.0
449498855	1165	PREDICTED: LOW QUALITY PROTEIN: probable	0.981	0.320	0.885	0.0
449485229	482	PREDICTED: LOW QUALITY PROTEIN: probable	0.986	0.778	0.878	0.0
356548037	381	PREDICTED: probable sugar phosphate/phos	0.984	0.981	0.855	0.0
357479173	389	Solute carrier family 35 member C2 [Medi	0.992	0.969	0.853	1e-179
18401506	375	Nucleotide-sugar transporter family prot	0.978	0.992	0.855	1e-178

>gi|356530491|ref|XP_003533814.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Glycine max]

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/380 (88%), Positives = 354/380 (93%), Gaps = 5/380 (1%)

Query: 3   MMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFL 62
           MMINK L LTY+YL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHM FSG VAFFL
Sbjct: 1   MMINKTLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVAFFL 60

Query: 63  VRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFF 122
           VRVFK+V+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF 
Sbjct: 61  VRVFKIVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFI 120

Query: 123 MAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVL 182
           MAVLCG DKAR DVFLNM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQVL
Sbjct: 121 MAVLCGIDKARCDVFLNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVL 180

Query: 183 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALN 242
           LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP+MEVSQIQFNFWIFFSNA+CALALN
Sbjct: 181 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFFSNAICALALN 240

Query: 243 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI 302
           FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI+GYAIALCGVVMYNYI
Sbjct: 241 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIVGYAIALCGVVMYNYI 300

Query: 303 KVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDN---NGGN-INSEPQIDEE 358
           KVKDVRA SQLP ESIPDRI KDWK EKKSSDI+ P+N  DN   +GGN   S+ +IDEE
Sbjct: 301 KVKDVRA-SQLPVESIPDRITKDWKFEKKSSDIYVPDNIGDNEGSSGGNGTASDMKIDEE 359

Query: 359 APLIASSRLSHIGRTQVSNH 378
            PLI+SSRLSHIGRTQ++N 
Sbjct: 360 TPLISSSRLSHIGRTQLTNQ 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556468|ref|XP_003546547.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Glycine max]

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/380 (88%), Positives = 351/380 (92%), Gaps = 5/380 (1%)

Query: 3   MMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFL 62
           MMINK L LTY+YL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHM FSG VAFFL
Sbjct: 1   MMINKTLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVAFFL 60

Query: 63  VRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFF 122
           VRVFK+V+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF 
Sbjct: 61  VRVFKIVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFI 120

Query: 123 MAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVL 182
           MAV CGTDKAR DVFLNM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQVL
Sbjct: 121 MAVFCGTDKARCDVFLNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVL 180

Query: 183 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALN 242
           LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP+MEVSQIQFNFWIF SNA+CALALN
Sbjct: 181 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFLSNAICALALN 240

Query: 243 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI 302
           FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI
Sbjct: 241 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI 300

Query: 303 KVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGN----INSEPQIDEE 358
           KVKDVRA SQLP ESIPDRI KDWK EKKSSDI+ P+N  D+ G +      S+ +IDEE
Sbjct: 301 KVKDVRA-SQLPVESIPDRITKDWKFEKKSSDIYVPDNIGDDEGSSGANGTASDMKIDEE 359

Query: 359 APLIASSRLSHIGRTQVSNH 378
            PLI+SSRLSHIGRTQ++N 
Sbjct: 360 TPLISSSRLSHIGRTQLTNQ 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647687|gb|ACU24305.1| unknown [Glycine max]

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/380 (88%), Positives = 353/380 (92%), Gaps = 5/380 (1%)

Query: 3   MMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFL 62
           MMINK L LTY+YL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHM FSG VAFFL
Sbjct: 1   MMINKTLFLTYVYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVAFFL 60

Query: 63  VRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFF 122
           VRVFK+V+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF 
Sbjct: 61  VRVFKIVTPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFI 120

Query: 123 MAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVL 182
           MAVLCG DKAR DVFLNM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQVL
Sbjct: 121 MAVLCGIDKARCDVFLNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVL 180

Query: 183 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALN 242
           LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP+MEVSQIQFNFWIFFSNA+CALALN
Sbjct: 181 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPVMEVSQIQFNFWIFFSNAICALALN 240

Query: 243 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI 302
           FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI+GYAIALCGVVMYNYI
Sbjct: 241 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIVGYAIALCGVVMYNYI 300

Query: 303 KVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDN---NGGNINS-EPQIDEE 358
           KVKDVRA SQLP ESIPDRI KDWK EKKSSDI+ P+N  DN   +GGN  + + +IDEE
Sbjct: 301 KVKDVRA-SQLPVESIPDRITKDWKFEKKSSDIYVPDNIGDNEGSSGGNGTAFDMKIDEE 359

Query: 359 APLIASSRLSHIGRTQVSNH 378
            PLI+SSRL HIGRTQ++N 
Sbjct: 360 TPLISSSRLFHIGRTQLTNQ 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477637|ref|XP_002267517.2| PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Vitis vinifera] gi|297736806|emb|CBI26007.3| unnamed protein product [Vitis vinifera]

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/382 (85%), Positives = 351/382 (91%), Gaps = 7/382 (1%)

Query: 3   MMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFL 62
           MMINKPLVLTYLYLLIYI+LSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSG VAFFL
Sbjct: 1   MMINKPLVLTYLYLLIYIVLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGAVAFFL 60

Query: 63  VRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFF 122
           VRV KV SPVKMT EIY+TCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF 
Sbjct: 61  VRVLKVASPVKMTIEIYSTCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFL 120

Query: 123 MAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVL 182
           MAV+CGTDK R DVFLNM+LVSVGVVISSYGEIHFN++GT+YQVTGI AEALRLVLTQVL
Sbjct: 121 MAVICGTDKLRCDVFLNMLLVSVGVVISSYGEIHFNVIGTVYQVTGIFAEALRLVLTQVL 180

Query: 183 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALN 242
           LQKKGLTLNPITSLYYIAPCSFVFLFVPWY LEKP ME+SQIQFNFWIFFSNALCALALN
Sbjct: 181 LQKKGLTLNPITSLYYIAPCSFVFLFVPWYFLEKPQMEISQIQFNFWIFFSNALCALALN 240

Query: 243 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI 302
           FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY+
Sbjct: 241 FSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYL 300

Query: 303 KVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNN------GGNINSEPQID 356
           KVKDVRA +QL +ES+P+RI KDWKLEKKSSDIF P++S+DNN      G    ++    
Sbjct: 301 KVKDVRA-AQLSSESLPERIVKDWKLEKKSSDIFVPDSSNDNNIRGSGGGNGPGADLNAA 359

Query: 357 EEAPLIASSRLSHIGRTQVSNH 378
           E  PL+AS+RLSHIGR+Q++ H
Sbjct: 360 EATPLLASARLSHIGRSQLTIH 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460393|ref|XP_004147930.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Cucumis sativus]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/376 (89%), Positives = 355/376 (94%), Gaps = 3/376 (0%)

Query: 4   MINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLV 63
           MIN+PLVLTYLYL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHMGFSG VAFFLV
Sbjct: 43  MINRPLVLTYLYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFFLV 102

Query: 64  RVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFM 123
           RVFKVVSPVKMTFEIYATCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF M
Sbjct: 103 RVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLM 162

Query: 124 AVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLL 183
           AV+CGTDK R DVFLNM+LVSVGVVISSYGEIHFN+VGT+YQVTGI AEALRLVLTQVLL
Sbjct: 163 AVVCGTDKLRCDVFLNMLLVSVGVVISSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLL 222

Query: 184 QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNF 243
           QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP M+V+QIQFNFWIFFSNALCALALNF
Sbjct: 223 QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPEMQVAQIQFNFWIFFSNALCALALNF 282

Query: 244 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 303
           SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGV+MYNYIK
Sbjct: 283 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVLMYNYIK 342

Query: 304 VKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAPLIA 363
           VKDVRA SQL +ESI DRIAKDWKLEKKS+DIF  +NS+D NGGN +S+  +DEEAPL+ 
Sbjct: 343 VKDVRA-SQLSSESITDRIAKDWKLEKKSTDIFT-SNSNDGNGGNGSSDINVDEEAPLL- 399

Query: 364 SSRLSHIGRTQVSNHG 379
           SSRLSH+GR QV NH 
Sbjct: 400 SSRLSHVGRMQVGNHN 415

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449498855|ref|XP_004160653.1| PREDICTED: LOW QUALITY PROTEIN: probable sugar phosphate/phosphate translocator At3g17430-like [Cucumis sativus]

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/375 (88%), Positives = 351/375 (93%), Gaps = 2/375 (0%)

Query: 4    MINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLV 63
            MIN+PLVLTYLYL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHMGFSG VAFFLV
Sbjct: 791  MINRPLVLTYLYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFFLV 850

Query: 64   RVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFM 123
            RVFKVVSPVKMTFEIYATCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF M
Sbjct: 851  RVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLM 910

Query: 124  AVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLL 183
            AV+CGTDK R DVF NMVLVSVGVV+SSYGEIHFN+VGT+YQVTGI AEALRLVLTQVLL
Sbjct: 911  AVVCGTDKLRCDVFFNMVLVSVGVVVSSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLL 970

Query: 184  QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNF 243
            QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP M+V+QIQFNFWIFFSN LCALALNF
Sbjct: 971  QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPEMQVTQIQFNFWIFFSNRLCALALNF 1030

Query: 244  SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 303
            SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGV+MYNYIK
Sbjct: 1031 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVLMYNYIK 1090

Query: 304  VKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAPLIA 363
            VKDVRA SQL ++S+PDRI KDWKLEKKSSDIF PN++  N G  + S+  +D+EAPL+A
Sbjct: 1091 VKDVRA-SQLSSDSLPDRIVKDWKLEKKSSDIFTPNSNDGNGGNGL-SDTNVDDEAPLLA 1148

Query: 364  SSRLSHIGRTQVSNH 378
            SSRLSHIGR QV NH
Sbjct: 1149 SSRLSHIGRMQVGNH 1163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449485229|ref|XP_004157106.1| PREDICTED: LOW QUALITY PROTEIN: probable sugar phosphate/phosphate translocator At3g17430-like [Cucumis sativus]

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/378 (87%), Positives = 351/378 (92%), Gaps = 3/378 (0%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           +  MIN+PLVLTYLYL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHMGFSG VAF
Sbjct: 106 LAKMINRPLVLTYLYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAF 165

Query: 61  FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
           FLVRVFKVVSPVKMTFEIYATCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct: 166 FLVRVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 225

Query: 121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
           F MAV+CGTDK R DVFLNM+LVSVGVVISSYGEIHFN+VGT+YQVTGI AEALRLVLTQ
Sbjct: 226 FLMAVVCGTDKLRCDVFLNMLLVSVGVVISSYGEIHFNVVGTVYQVTGIFAEALRLVLTQ 285

Query: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
           VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP M+V+QIQFNFWIFF   LCALA
Sbjct: 286 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPEMQVAQIQFNFWIFFPXPLCALA 345

Query: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
           LNFS FLVIGRTGAVTIRVAGVLKDWILIALSTVI PESTITGLNIIGYAIALCGV+MYN
Sbjct: 346 LNFSXFLVIGRTGAVTIRVAGVLKDWILIALSTVIXPESTITGLNIIGYAIALCGVLMYN 405

Query: 301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNINSEPQIDEEAP 360
           YIKVKDVRA SQL +ESI DRIAKDWKLEKKS+DIF  +NS+D NGGN +S+  +DEEAP
Sbjct: 406 YIKVKDVRA-SQLSSESITDRIAKDWKLEKKSTDIFT-SNSNDGNGGNGSSDINVDEEAP 463

Query: 361 LIASSRLSHIGRTQVSNH 378
           L+ SSRLSH+GR QV NH
Sbjct: 464 LL-SSRLSHVGRMQVGNH 480

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548037|ref|XP_003542410.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Glycine max]

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/380 (85%), Positives = 346/380 (91%), Gaps = 6/380 (1%)

Query: 4   MINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLV 63
           M+NK L+LTY YL IYILLSSGVILYNKWVLSPKYFNFP PI+LTMIHMGFSG VAFFLV
Sbjct: 1   MMNKTLLLTYFYLFIYILLSSGVILYNKWVLSPKYFNFPLPISLTMIHMGFSGAVAFFLV 60

Query: 64  RVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFM 123
           RVFKVV+PVKMTFEIYATCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATF +
Sbjct: 61  RVFKVVTPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLV 120

Query: 124 AVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLL 183
           AV+CGTDKAR DVF NM++VSVGVVISSYGEIHFN+VGT+YQVTGI AEALRLVLTQVLL
Sbjct: 121 AVMCGTDKARCDVFFNMLMVSVGVVISSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLL 180

Query: 184 QKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNF 243
           QKKGL+LNPITSLYYIAPCSFVFL VPWYLLEKP+MEVSQIQFNFWIFFSNALCALALNF
Sbjct: 181 QKKGLSLNPITSLYYIAPCSFVFLSVPWYLLEKPVMEVSQIQFNFWIFFSNALCALALNF 240

Query: 244 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 303
           SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK
Sbjct: 241 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 300

Query: 304 VKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNNGGNIN----SEPQIDEEA 359
           VKDVRA SQ P E IPD I KDWK EK+SSD + P+N S+N G        S+  IDEEA
Sbjct: 301 VKDVRA-SQSPNEIIPDGITKDWKFEKRSSDFYVPDNVSNNGGSGGGNGSLSDMNIDEEA 359

Query: 360 PLIASSRLSHIGRTQVSNHG 379
           PLI SSR+SHIGR Q++NH 
Sbjct: 360 PLI-SSRVSHIGRMQLANHA 378

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479173|ref|XP_003609872.1| Solute carrier family 35 member C2 [Medicago truncatula] gi|355510927|gb|AES92069.1| Solute carrier family 35 member C2 [Medicago truncatula]

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 331/388 (85%), Positives = 348/388 (89%), Gaps = 11/388 (2%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           MKMM +K L+LTY YL IYILLSSGVILYNKWVLSPKYFNFP PITLTMIHM FSG VAF
Sbjct: 1   MKMM-SKTLLLTYFYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMAFSGAVAF 59

Query: 61  FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
           FLVRVFKVVSPVKMTFEIYATCV+PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct: 60  FLVRVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 119

Query: 121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
           F +AVLCG DKAR DVFLNM+LVSVGVV+SSYGEIHFNIVGTLYQVTGI AEA RLVLTQ
Sbjct: 120 FLVAVLCGIDKARCDVFLNMLLVSVGVVVSSYGEIHFNIVGTLYQVTGIFAEAFRLVLTQ 179

Query: 181 VLLQKKGLTLNPITSLYYIAPCS-----FVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNA 235
           VLLQKKGL+LNPITSLYYIAPC      FVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNA
Sbjct: 180 VLLQKKGLSLNPITSLYYIAPCRYFVLIFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNA 239

Query: 236 LCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCG 295
           LCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGY IALCG
Sbjct: 240 LCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYGIALCG 299

Query: 296 VVMYNYIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSDNN----GGNINS 351
           VVMYNYIKV+DVRA  QL AESIPDRI KDWK EKKSSDI+ P+N  ++     G    S
Sbjct: 300 VVMYNYIKVRDVRA-LQLTAESIPDRITKDWKFEKKSSDIYVPDNVDNDEGSSGGNGSAS 358

Query: 352 EPQIDEEAPLIASSRLSHIGRTQVSNHG 379
           +  IDEEAPLI+SS LSHIGRTQ+++H 
Sbjct: 359 DMNIDEEAPLISSSWLSHIGRTQLTSHA 386

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401506|ref|NP_566577.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|75273793|sp|Q9LRP2.1|PT317_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At3g17430 gi|11994681|dbj|BAB02919.1| unnamed protein product [Arabidopsis thaliana] gi|16648967|gb|AAL24335.1| Unknown protein [Arabidopsis thaliana] gi|20259902|gb|AAM13298.1| unknown protein [Arabidopsis thaliana] gi|332642431|gb|AEE75952.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 326/381 (85%), Positives = 348/381 (91%), Gaps = 9/381 (2%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           M  MINK LVLTY+YLLIYI+LSSGVILYNKWVLSPKYFNFP PITLTMIHMGF+G VAF
Sbjct: 1   MAKMINKTLVLTYIYLLIYIILSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFAGFVAF 60

Query: 61  FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
            L+RVFKVV+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct: 61  LLIRVFKVVAPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120

Query: 121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
           F MAV+CGTDK R DVF NM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQ
Sbjct: 121 FIMAVVCGTDKPRCDVFSNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQ 180

Query: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
           VLLQKKGLTLNPITSLYYIAPCSFVFL +PWY+LEKP MEVSQIQFNFWIFFSNALCALA
Sbjct: 181 VLLQKKGLTLNPITSLYYIAPCSFVFLALPWYVLEKPTMEVSQIQFNFWIFFSNALCALA 240

Query: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
           LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI GYAIALCGVVMYN
Sbjct: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNITGYAIALCGVVMYN 300

Query: 301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKSSDIFNPNNSSD--NNGGNINSEPQIDEE 358
           YIKV+DV+A SQ  A+S+PDRI K++K+EKKSSD FNPN+S +    GG +N     DEE
Sbjct: 301 YIKVRDVKA-SQPTADSLPDRINKEYKMEKKSSDKFNPNDSVEIPRVGGEVN-----DEE 354

Query: 359 APLIASSRLSHIGRTQVSNHG 379
           APLI +SRLSHIGRTQ+ NH 
Sbjct: 355 APLI-TSRLSHIGRTQLGNHA 374

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	380
TAIR|locus:2093596	375	AT3G17430 [Arabidopsis thalian	0.981	0.994	0.783	1.8e-149
TAIR|locus:2007745	367	AT1G48230 [Arabidopsis thalian	0.957	0.991	0.767	1.7e-146
TAIR|locus:2024827	332	AT1G53660 [Arabidopsis thalian	0.752	0.861	0.5	5e-76
TAIR|locus:2090995	340	AT3G14410 [Arabidopsis thalian	0.763	0.852	0.491	1e-75
TAIR|locus:2147957	351	AT5G11230 [Arabidopsis thalian	0.742	0.803	0.489	9.3e-75
TAIR|locus:2145487	349	AT5G25400 [Arabidopsis thalian	0.773	0.842	0.461	2.5e-74
TAIR|locus:2127841	350	AT4G32390 [Arabidopsis thalian	0.734	0.797	0.494	5.1e-74
TAIR|locus:2040040	347	AT2G25520 [Arabidopsis thalian	0.773	0.847	0.481	2.2e-73
ASPGD|ASPL0000040742	400	ugtA [Emericella nidulans (tax	0.702	0.667	0.401	6.2e-46
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.707	0.788	0.290	7.9e-30

TAIR|locus:2093596 AT3G17430 [Arabidopsis thaliana (taxid:3702)]

 Score = 1459 (518.7 bits), Expect = 1.8e-149, P = 1.8e-149
 Identities = 296/378 (78%), Positives = 313/378 (82%)

Query:     1 MKMMINKPXXXXXXXXXXXXXXXXXXXXXNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
             M  MINK                      NKWVLSPKYFNFP PITLTMIHMGF+G VAF
Sbjct:     1 MAKMINKTLVLTYIYLLIYIILSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFAGFVAF 60

Query:    61 FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
              L+RVFKVV+PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct:    61 LLIRVFKVVAPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120

Query:   121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
             F MAV+CGTDK R DVF NM+LVSVGVVISSYGEIHFNIVGT+YQVTGI AEALRLVLTQ
Sbjct:   121 FIMAVVCGTDKPRCDVFSNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQ 180

Query:   181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
             VLLQKKGLTLNPITSLYYIAPCSFVFL +PWY+LEKP MEVSQIQFNFWIFFSNALCALA
Sbjct:   181 VLLQKKGLTLNPITSLYYIAPCSFVFLALPWYVLEKPTMEVSQIQFNFWIFFSNALCALA 240

Query:   241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
             LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI GYAIALCGVVMYN
Sbjct:   241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNITGYAIALCGVVMYN 300

Query:   301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKXXXXXXXXXXXXXXXXXXXXEPQIDEEAP 360
             YIKV+DV+AS Q  A+S+PDRI K++K+EKK                        DEEAP
Sbjct:   301 YIKVRDVKAS-QPTADSLPDRINKEYKMEKKSSDKFNPNDSVEIPRVGGEVN---DEEAP 356

Query:   361 LIASSRLSHIGRTQVSNH 378
             LI +SRLSHIGRTQ+ NH
Sbjct:   357 LI-TSRLSHIGRTQLGNH 373

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2007745 AT1G48230 [Arabidopsis thaliana (taxid:3702)]

 Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
 Identities = 290/378 (76%), Positives = 309/378 (81%)

Query:     1 MKMMINKPXXXXXXXXXXXXXXXXXXXXXNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
             M  MINK                      NKWVLSPKYFNFP PITLTMIHMGFSG VAF
Sbjct:     1 MAKMINKTLVLTYIYLLIYIILSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGFVAF 60

Query:    61 FLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120
              L+RVFKVVSPVKMTFEIY TCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT
Sbjct:    61 LLIRVFKVVSPVKMTFEIYVTCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVAT 120

Query:   121 FFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQ 180
             F MAV+CGTDKAR DVF+NMVLVSVGVV+SSYGEI+FN++GT+YQV GI AEALRLVLTQ
Sbjct:   121 FLMAVVCGTDKARCDVFMNMVLVSVGVVVSSYGEINFNVIGTVYQVMGIFAEALRLVLTQ 180

Query:   181 VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA 240
             VLLQKKGLTLNP+TSLYYIAPCSFVFL +PWY+LEKP ++VSQIQFNFWIFFSNALCALA
Sbjct:   181 VLLQKKGLTLNPVTSLYYIAPCSFVFLSLPWYVLEKPNIDVSQIQFNFWIFFSNALCALA 240

Query:   241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
             LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI GYAIALCGVVMYN
Sbjct:   241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNITGYAIALCGVVMYN 300

Query:   301 YIKVKDVRASSQLPAESIPDRIAKDWKLEKKXXXXXXXXXXXXXXXXXXXXEPQIDEEAP 360
             YIK+KDV+A  Q   +S+PDRI KDWK EK                         DEEAP
Sbjct:   301 YIKIKDVKAI-QPTTDSLPDRITKDWK-EKNSSDGGSPRGLELN-----------DEEAP 347

Query:   361 LIASSRLSHIGRTQVSNH 378
             LI +SRLSHIGRTQ+ NH
Sbjct:   348 LI-TSRLSHIGRTQLGNH 364

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2024827 AT1G53660 [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 146/292 (50%), Positives = 207/292 (70%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVK-MTFEIYATCVVPISA 88
             NKWVLS K  NFP+P+ LT++HM FS V+ F L +VFKV+   + MT EIY T V+PI A
Sbjct:    35 NKWVLSSKEINFPYPLGLTLLHMTFSSVLCFLLTKVFKVMKVEEGMTLEIYVTSVIPIGA 94

Query:    89 FFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVV 148
              FA +LW GNTAYL+I+VAF QMLKA+MPVA F + V  G +     + L M ++S GV+
Sbjct:    95 MFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISFGVL 154

Query:   149 ISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF 208
             +SSYGE++ N VG +YQ+ GIV+EALRL+L ++L+++KG+ LNP++ +YY++PCS + LF
Sbjct:   155 VSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKGIKLNPLSLMYYMSPCSAICLF 214

Query:   209 VPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268
             +PW  LEK  M+     F+  +   N+LC  ALN S+FLVI RT A+TIR+AGV+KDW++
Sbjct:   215 IPWIFLEKSKMDTWN--FHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWLV 272

Query:   269 IALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKD---VRASSQLPAES 317
             + +S ++F E+ +T +N+ GYA+A+ GV  YN  K K+   +   SQ P  S
Sbjct:   273 VLVSALLFAETKLTIINLFGYAVAIVGVATYNNHKPKNGESITLVSQSPKNS 324

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2090995 AT3G14410 [Arabidopsis thaliana (taxid:3702)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 146/297 (49%), Positives = 210/297 (70%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVK-MTFEIYATCVVPISA 88
             NKWVLS K  NFP+P+ LT++HM FS V+ F L +V K+V   + MT EIY T V+PI A
Sbjct:    33 NKWVLSSKEINFPYPLGLTLLHMIFSSVLCFLLTKVLKIVKVEEGMTLEIYVTSVIPIGA 92

Query:    89 FFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVV 148
              FA +LW GNTAYL+ISVAF QMLKA+MPVA F + V  G +     + L M ++S GV+
Sbjct:    93 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 152

Query:   149 ISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF 208
             ++SYGE++ N +G +YQ+ G+V EALRL+  ++L+++KG+ LNPI+ +YY++PCS + LF
Sbjct:   153 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 212

Query:   209 VPWYLLEKPMMEVS-QIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWI 267
             VPW  LEK  ++ +    F+F +   N+LC  ALN S+FLVI  T A+TIRVAGV+KDW+
Sbjct:   213 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 272

Query:   268 LIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRA---SSQLP--AESIP 319
             ++ +S ++F ++ +T +N+ GYAIA+ GV  YN  K+K   +   +++ P  AESIP
Sbjct:   273 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIP 329

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2147957 AT5G11230 [Arabidopsis thaliana (taxid:3702)]

 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 139/284 (48%), Positives = 200/284 (70%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF 89
             NK++L  K +N+PFPI+LTMIHM F   +AF +++VFK V PVKMT E Y   VVPI A 
Sbjct:    36 NKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVFKFVEPVKMTRETYLRSVVPIGAL 95

Query:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI 149
             +A SLW  N+AY+++SV+FIQMLKALMPVA + + VL   +  + D  +NM+ +S GV I
Sbjct:    96 YALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVAI 155

Query:   150 SSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFV 209
             ++YGE  F++ G + Q+  +  EA RLVL Q+LL  KG+ LNPITSLYY+APC   FLF+
Sbjct:   156 AAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDKGIKLNPITSLYYVAPCCLAFLFI 215

Query:   210 PWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268
             PW  +E P++ + S    ++ IF +N+ CA ALN ++FL++G+T A+T+ VAGV+KDW+L
Sbjct:   216 PWIYVEFPVLRDTSSFHLDYAIFGANSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLL 275

Query:   269 IALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASSQ 312
             IA S  +  + T+T +N+ GY IA  GV  YN+ K++ ++A  +
Sbjct:   276 IAFSWSVIKD-TVTPINLFGYGIAFLGVAYYNHAKLQALKAKEE 318

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2145487 AT5G25400 [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 137/297 (46%), Positives = 208/297 (70%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF 89
             NK++L  K +++PFPI+LTMIHM F   +AF L++VFK V PV M+ + Y   VVPI A 
Sbjct:    36 NKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVSMSRDTYLRSVVPIGAL 95

Query:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI 149
             ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL   +  + +  +NM+ +S GV I
Sbjct:    96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVAI 155

Query:   150 SSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFV 209
             ++YGE  F++ G + Q+  +  EA RLV+ Q+LL  KG+TLNPITSLYY+APC   FLF+
Sbjct:   156 AAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLAFLFI 215

Query:   210 PWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268
             PW ++E P++ + S   F++ IF +N+ CA ALN ++FL++G+T A+T+ VAGV+KDW+L
Sbjct:   216 PWIVVEFPILRDTSSFHFDYLIFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLL 275

Query:   269 IALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRAS-SQLPAESIPDRIAK 324
             IA S  +  + T+T +N+ GY IA  GV  YN+ K++ ++A  +Q  A+ + +   +
Sbjct:   276 IAFSWSVIKD-TVTPINLFGYGIAFLGVAYYNHAKLQALKAKEAQKTAQQVDEETGR 331

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2127841 AT4G32390 [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 139/281 (49%), Positives = 198/281 (70%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF 89
             NK++L  K +N+PFPITLTMIHM F   +A  L++VFK+V PV M+ + Y   VVPI A 
Sbjct:    36 NKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVSMSRDTYIRSVVPIGAL 95

Query:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI 149
             ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL   +  + +   NM+ +S GV I
Sbjct:    96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKESFKSETMTNMLSISFGVAI 155

Query:   150 SSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFV 209
             ++YGE  F+  G + Q+  +  EA RLVL Q+LL  KG+ LNPITSLYY+APC  VFLF 
Sbjct:   156 AAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLFF 215

Query:   210 PWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268
             PW  +E P++ E S   F+F IF +N++CA ALN ++FL++G+T A+T+ VAGV+KDW+L
Sbjct:   216 PWIFVELPILRETSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLL 275

Query:   269 IALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRA 309
             IA S  +  + T+T LN+ GY +A  GV  YN+ K++ ++A
Sbjct:   276 IAFSWSVIKD-TVTPLNLFGYGLAFLGVAYYNHCKLQALKA 315

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2040040 AT2G25520 [Arabidopsis thaliana (taxid:3702)]

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 143/297 (48%), Positives = 203/297 (68%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF 89
             NK++L  K +N+PFPITLTMIHMGF   +A  L++VFKVV PV M+ E Y   VVPI A 
Sbjct:    36 NKYILDKKMYNWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVSMSRETYLRSVVPIGAL 95

Query:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI 149
             ++ SLW  N+AY+++SV+FIQMLKALMPVA + + VL   +  +     NM+ +S GV I
Sbjct:    96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVAI 155

Query:   150 SSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFV 209
             ++YGE  F+  G   Q+  +  EA RLVL Q+LL  KG+ LNPITSLYY+APC  VFL V
Sbjct:   156 AAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLSV 215

Query:   210 PWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268
             PW  +E P++ + S   F+F IF +N++CA ALN ++FL++G+T A+T+ VAGV+KDW+L
Sbjct:   216 PWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLL 275

Query:   269 IALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRAS-SQLPAESIPDRIAK 324
             IA S  +  + T+T +N+ GY +A  GV  YN+ K++ ++A  +Q   ++  D   K
Sbjct:   276 IAFSWSVIKD-TVTPINLFGYGLAFLGVGYYNHCKLQALKAKDAQKKVQASDDEAGK 331

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

ASPGD|ASPL0000040742 ugtA [Emericella nidulans (taxid:162425)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 110/274 (40%), Positives = 153/274 (55%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS---PVKMTFEIYATCVVPI 86
             NK +L   Y  F FPI LT  H+ F+  +   L R   ++     VKMT  +Y   +VPI
Sbjct:    58 NKHILD--YAQFRFPIILTTWHLAFATFMTQVLARTTTLLDGRKTVKMTGRVYLRAIVPI 115

Query:    87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVG 146
               FF+ SL  GN  YL++SVAFIQMLKA  PVA        G     L V  N+ ++  G
Sbjct:   116 GLFFSLSLICGNVTYLYLSVAFIQMLKATTPVAVLLATWGMGMAPVNLKVLTNVSVIVFG 175

Query:   147 VVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVF 206
             V+I+S+GEI F  +G L+Q+ GI+ EA RLV+ Q LL      ++P+ SLYY AP   V 
Sbjct:   176 VIIASFGEIKFVFIGFLFQIAGIIFEATRLVMVQRLLSSAEYKMDPLVSLYYFAPVCAVM 235

Query:   207 LFVPWYLLEKPMMEVSQI-QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKD 265
               V    LE P + +  I     W   +NA+ A  LN S+  +IG+T ++ + + GVLKD
Sbjct:   236 NGVTALFLEVPTLTMDHIYNVGVWTLLANAMVAFMLNVSVVFLIGKTSSLVMTLCGVLKD 295

Query:   266 WILIALSTVIFPESTITGLNIIGYAIALCGVVMY 299
              +L+  S VI+  + +T L   GY+IAL G+V Y
Sbjct:   296 ILLVVASMVIW-NTPVTALQFFGYSIALIGLVYY 328

GO:0008643 "carbohydrate transport" evidence=ISO;IMP

GO:0043936 "asexual sporulation resulting in formation of a cellular spore" evidence=IMP

GO:0070787 "conidiophore development" evidence=IMP

GO:0031505 "fungal-type cell wall organization" evidence=IMP

GO:0035690 "cellular response to drug" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030448 "hyphal growth" evidence=IEA

GO:0051278 "fungal-type cell wall polysaccharide biosynthetic process" evidence=IEA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 81/279 (29%), Positives = 151/279 (54%)

Query:    30 NKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF 89
             NKW+      +F FP++++ +H   S + A+ +++V K+   + +  E     + P+S  
Sbjct:    33 NKWIFQK--LDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPEDRWRRIFPMSFV 90

Query:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI 149
             F  ++  GN +  +I V+F+Q +K+L P  T  +  L         ++ ++V +  G+++
Sbjct:    91 FCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 150

Query:   150 SSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFV 209
             +S  E+ FN+ G    + G +A + + +L + LL   G   + I ++YY+AP + + L +
Sbjct:   151 TSITELSFNVFGFCAALFGCLATSTKTILAESLLH--GYKFDSINTVYYMAPFATMILGL 208

Query:   210 PWYLLEKP-MMEVSQIQFNFW----IFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLK 264
             P +LLE+  +++  +   + W    I F++ + A  LNFSIF VI  T AVT  VAG LK
Sbjct:   209 PAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLK 268

Query:   265 DWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 303
               + + +S +IF  + I+ +N +G  I L G   Y Y++
Sbjct:   269 VAVAVFVSWMIF-RNPISPMNAVGCGITLVGCTFYGYVR 306

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LRP2	PT317_ARATH	No assigned EC number	0.8556	0.9789	0.992	yes	no
Q9LNH5	PT148_ARATH	No assigned EC number	0.8306	0.9578	0.9918	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	380
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	8e-30
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	6e-11
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	4e-10

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  111 bits (281), Expect = 8e-30
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 10/150 (6%)

Query: 161 GTLYQVTGIVAEALRLVLTQVLLQKKGLT-LNPITSLYYIAPCSFVFLFVPWYLLEKPMM 219
           G +  +      ALRL+L+Q LL+KK  T LN +  LYY++P +F+ L       E   +
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 220 EVS--------QIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIAL 271
                      +      +   + + A   N S F ++GRT  +T  VAG +K  ++I L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 272 STVIFPESTITGLNIIGYAIALCGVVMYNY 301
           S +IF +  +T LNI+G AIA+ GVV+Y+Y
Sbjct: 121 SVIIFGD-PVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 59/305 (19%), Positives = 128/305 (41%), Gaps = 19/305 (6%)

Query: 11  LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS 70
            T L   ++  L+    +YNK +L+     FP+P   T+I +   G +   L     +  
Sbjct: 2   QTGLLFGLWYFLNVYFNIYNKKLLNV----FPYPYFKTLISL-AVGSLYCLLSWSSGLPK 56

Query: 71  PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTD 130
            +K++  +    ++P++          N +   ++V+F   +KA+ P  +  ++      
Sbjct: 57  RLKISSALLKL-LLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQ 115

Query: 131 KARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTL 190
           +    ++L+++ +  GV ++S  E+ FN  G L  +   +    R + ++  +  K  +L
Sbjct: 116 EFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK--SL 173

Query: 191 NPITSLYYIAPCSFVFLFVPWYLLEKPMM----------EVSQIQFNFWIFFSNALCALA 240
           +      YI+  S   L  P ++ E P             V+  +       +       
Sbjct: 174 DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF 233

Query: 241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN 300
                F+++GR   +T  V   +K  ++I +S + F  + I+   + G  IA+ GV +Y+
Sbjct: 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFF-GTKISPQQVFGTGIAIAGVFLYS 292

Query: 301 YIKVK 305
            +K +
Sbjct: 293 RVKAQ 297

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 60.5 bits (147), Expect = 4e-10
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 105 SVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLY 164
           +V+F  ++KA  PV T  +++L       L  +L+++ +  GV ++S  E+HF  +    
Sbjct: 139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWC 198

Query: 165 QVTGIVAEALRLVLTQVLLQKK-----GLTLNPITSLYYIA------PCSFVFLFVPWYL 213
            +   +  +LR +  +  ++ K      LT + I  L  +       P    F    W  
Sbjct: 199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP 258

Query: 214 L----EKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILI 269
           +       M   ++    F IFFS  +     N   F  +G+   VT  VA  LK  ++I
Sbjct: 259 VWTNYTANMTNYTKGIIIFKIFFS-GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVII 317

Query: 270 ALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK 303
             S +IF ++ +T L  +G A+A+ G ++Y+  K
Sbjct: 318 VSSIIIF-QTQVTLLGYLGMAVAILGALLYSLFK 350

Length = 350

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	380
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.98
PRK11272	292	putative DMT superfamily transporter inner membran	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.92
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.88
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.88
KOG1580	337	consensus UDP-galactose transporter related protei	99.85
KOG1581	327	consensus UDP-galactose transporter related protei	99.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.83
COG2962	293	RarD Predicted permeases [General function predict	99.83
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.82
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.8
KOG1582	367	consensus UDP-galactose transporter related protei	99.8
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.78
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.78
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.74
KOG2766	336	consensus Predicted membrane protein [Function unk	99.72
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.65
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.64
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.41
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.39
COG2510	140	Predicted membrane protein [Function unknown]	99.3
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.18
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.17
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.17
COG2510	140	Predicted membrane protein [Function unknown]	99.13
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.02
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.95
PRK15430	296	putative chloramphenical resistance permease RarD;	98.83
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.82
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.81
PLN00411	358	nodulin MtN21 family protein; Provisional	98.66
PRK11272	292	putative DMT superfamily transporter inner membran	98.59
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.59
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.55
PRK13499	345	rhamnose-proton symporter; Provisional	98.47
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.45
PRK11689	295	aromatic amino acid exporter; Provisional	98.43
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.39
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.37
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.34
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.22
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.0
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.95
COG2962	293	RarD Predicted permeases [General function predict	97.87
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.84
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.79
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.77
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.74
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.73
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.68
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.62
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.59
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.59
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.54
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.53
PRK11431	105	multidrug efflux system protein; Provisional	97.53
COG2076	106	EmrE Membrane transporters of cations and cationic	97.52
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.35
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.15
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.05
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.0
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.88
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.88
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.84
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.78
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.73
PRK13499	345	rhamnose-proton symporter; Provisional	96.56
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.56
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.43
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.37
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.32
PRK11431	105	multidrug efflux system protein; Provisional	96.15
COG2076	106	EmrE Membrane transporters of cations and cationic	96.03
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.89
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.88
KOG2765	416	consensus Predicted membrane protein [Function unk	95.46
KOG1580	337	consensus UDP-galactose transporter related protei	94.92
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.79
KOG1581	327	consensus UDP-galactose transporter related protei	93.88
KOG4510	346	consensus Permease of the drug/metabolite transpor	93.77
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.4
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.29
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	91.87
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.66
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.21
PRK13108	460	prolipoprotein diacylglyceryl transferase; Reviewe	89.65
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	87.87
PF05297	381	Herpes_LMP1: Herpesvirus latent membrane protein 1	85.87
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	85.56
PF10225	249	DUF2215: Uncharacterized conserved protein (DUF221	82.88
KOG3912	372	consensus Predicted integral membrane protein [Gen	81.78
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	81.74
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	80.69
PRK02237	109	hypothetical protein; Provisional	80.11

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.8e-36  Score=282.39  Aligned_cols=285  Identities=20%  Similarity=0.329  Sum_probs=236.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHH
Q 016904           11 LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFF   90 (380)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (380)
                      .....+++|++.+++++++||++++    ++++|.++++.|++++.+++.+... .+.+++++.++++ ++..++.|+++
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~----~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~g~~~   75 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLN----VFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSAL-LKLLLPVAIVH   75 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh----hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHH-HHHHHHHHHHH
Confidence            3566899999999999999999999    7889999999999998777655522 2233445566666 68888999999


Q ss_pred             HHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHHHHHHH
Q 016904           91 ASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIV  170 (380)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~~  170 (380)
                      +....+.|+|++|++++.+++++++.|+++++++++++|||++++++.+++++++|+++....+.+.+..|+++++++++
T Consensus        76 ~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~  155 (302)
T TIGR00817        76 TIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNI  155 (302)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999998776666677889999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccc---c-----chhhHHH-HHHHHH-HHHH
Q 016904          171 AEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVS---Q-----IQFNFWI-FFSNAL-CALA  240 (380)
Q Consensus       171 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~---~-----~~~~~~~-~~~~~~-~~~~  240 (380)
                      +|++|.++.||..++  .++|+..++.|+...+++.++|.....|++.....   .     .....+. .+..+. +...
T Consensus       156 ~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (302)
T TIGR00817       156 TFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF  233 (302)
T ss_pred             HHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence            999999999998663  23688999999999999999998776664332111   0     1111222 223333 3444


Q ss_pred             HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       241 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      .+..++.++++++|+++++.++++|++++++|++++ ||++++.+++|+++++.|+++|++.|.
T Consensus       234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~l-ge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFF-GTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhc-CCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            556677899999999999999999999999999999 667999999999999999999986543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.7e-35  Score=279.98  Aligned_cols=288  Identities=18%  Similarity=0.260  Sum_probs=243.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc-HHhhhHHhhhHH
Q 016904            9 LVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMT-FEIYATCVVPIS   87 (380)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   87 (380)
                      .+...+++++|+.+++..++.||++++    .+|+|++++.+|++++++++.++.. .+.+++++.+ ++++++.+++.|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHH
Confidence            567888999999999999999999999    7899999999999999887655532 3333334443 455578899999


Q ss_pred             HHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHHHH
Q 016904           88 AFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVT  167 (380)
Q Consensus        88 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~l~  167 (380)
                      +++...+...+.|+++++++.+++++++.|+++++++++++|||++++++++++++++|+++.+.++.++++.|++++++
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~  201 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAML  201 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHH
Confidence            99887777788999999999999999999999999999999999999999999999999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhCC---CCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcccc---------cc--chhhHHHHHH
Q 016904          168 GIVAEALRLVLTQVLLQKKG---LTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEV---------SQ--IQFNFWIFFS  233 (380)
Q Consensus       168 s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~---------~~--~~~~~~~~~~  233 (380)
                      |++++|++.++.|+.+++++   .++++..+..++.+.+.++++|.....|......         ..  +...++.++.
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            99999999999999987643   1366777778888899999999877666432110         01  1122344566


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          234 NALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       234 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      +++..+..+.+.+.++++++|.++++.++++|++++++|++++ +|++++.+++|.++++.|+++|++.
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~-ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIF-QTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHh-CCCCchHhHHHHHHHHHHHHHHhhc
Confidence            7777788888888999999999999999999999999999999 6779999999999999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=6e-35  Score=265.89  Aligned_cols=298  Identities=36%  Similarity=0.569  Sum_probs=264.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhh
Q 016904            6 NKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVP   85 (380)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (380)
                      .++.+.....+..|++++++.++.||++++  .++|++|.+++..+++.+.+.+ .+.+..+..++.+.+.+.+++.+++
T Consensus        12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~--~~~f~~p~~lt~~~~~~~~l~~-~v~~~l~~~~~~~~~~~~~~~~llp   88 (316)
T KOG1441|consen   12 LKKILRIGIAFAIWYVLSVGVIILNKYILS--KYGFPFPITLTMLHLFCGALAL-LVIKVLKLVPPSKISSKLPLRTLLP   88 (316)
T ss_pred             cchhHHHHHHHHHHhhhheeeEEeeHhhhc--cCCCCCccHHHHHHHHHHHHHH-HHHHHhcCCCCCccccccchHHHHH
Confidence            445677888899999999999999999999  5899999999999887665544 4455566667777767777899999


Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHH
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQ  165 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~  165 (380)
                      .+++++++.++.|.++.|+|++++++++++.|+++.++++++.+|+.++..+++++....|+++....|.++|+.|.+.+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHH-HHHHhhcCCcc---ccccchhhHHHHHHHHHHHHHH
Q 016904          166 VTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLF-VPWYLLEKPMM---EVSQIQFNFWIFFSNALCALAL  241 (380)
Q Consensus       166 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  241 (380)
                      +++.+..++++++.++++++++.++|+.+++.|+...+.+.++ |.....|+...   ....|....+..++..++++..
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~  248 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLL  248 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHH
Confidence            9999999999999999998777889999999999999999999 76666666554   3334555555556666999999


Q ss_pred             HHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhhh
Q 016904          242 NFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDV  307 (380)
Q Consensus       242 ~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~~  307 (380)
                      |...|+++.+++|++.++.+.++.+++++.|+++| +++.++.+..|+++.++|+.+|++.|.+++
T Consensus       249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF-~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIF-GNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHHHHHcccCchhhhhhccceEEEEEEeEeeee-cCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999999999999999999 558999999999999999999998876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=9.7e-32  Score=253.40  Aligned_cols=292  Identities=9%  Similarity=0.089  Sum_probs=224.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCcccHHhhhHHhh
Q 016904            6 NKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKV-VSPVKMTFEIYATCVV   84 (380)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~   84 (380)
                      +|+..+..+.++.-.+...++..+.|..++   .+++ |+.+.++|++++++++.++.+..++ +++++.++++ +..+.
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~---~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~-~~~l~   82 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATS---KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI-LSKIG   82 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHH---CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH-HHHHH
Confidence            444566677778888888888889999987   4676 9999999999999999888765443 2234445666 45555


Q ss_pred             hHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHh------ccccccHhHHHHHHHHHhhhheeeec-cc--
Q 016904           85 PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLC------GTDKARLDVFLNMVLVSVGVVISSYG-EI--  155 (380)
Q Consensus        85 ~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~------l~ek~~~~~~~~v~l~~~Gv~l~~~~-~~--  155 (380)
                      ..+++....+.+.++|++|++++.++++.++.|++++++++++      +|||+++++++|++++++|+.++... +.  
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccc
Confidence            5666555566789999999999999999999999999999999      69999999999999999999876532 10  


Q ss_pred             ---------------------eeh-HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 016904          156 ---------------------HFN-IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYL  213 (380)
Q Consensus       156 ---------------------~~~-~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~  213 (380)
                                           ..+ ..|++++++++++||+|++++|+..++.+   +.....+++..++.+.+.++...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~---~~~~~t~~~~~~~~~~~~~~~l~  239 (358)
T PLN00411        163 FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP---AAFTVSFLYTVCVSIVTSMIGLV  239 (358)
T ss_pred             ccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHhHHHHHHHHHHHHHHHHHHHH
Confidence                                 112 45999999999999999999999877632   33455666666666666555555


Q ss_pred             hcCCccc--cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHH
Q 016904          214 LEKPMME--VSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAI  291 (380)
Q Consensus       214 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~l  291 (380)
                      .+.....  ...+....+.+++.++.+.+.+.++++++++.+|.+++++.+++|++++++|++++ +|++++.+++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~L-gE~lt~~~~iG~~L  318 (358)
T PLN00411        240 VEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFL-NDSLYLGCLIGGIL  318 (358)
T ss_pred             HccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHh-CCCCcHHHHHHHHH
Confidence            5432211  11222223334444555556677789999999999999999999999999999999 77799999999999


Q ss_pred             HHHHHHHHHHhhhhh
Q 016904          292 ALCGVVMYNYIKVKD  306 (380)
Q Consensus       292 ii~g~~~~~~~~~~~  306 (380)
                      |+.|+++..+.+++|
T Consensus       319 Il~Gv~l~~~~~~~~  333 (358)
T PLN00411        319 ITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHhhhhhh
Confidence            999999988755444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.98  E-value=1.7e-30  Score=227.70  Aligned_cols=285  Identities=26%  Similarity=0.443  Sum_probs=253.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCC---CcccHHhhhHHhhhH
Q 016904           10 VLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSP---VKMTFEIYATCVVPI   86 (380)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~   86 (380)
                      ++.++++.+|++++++..+++|+.-.    +|++|++++.+|+++-.++.....+..++..+   ...+|+++++++.|.
T Consensus        15 V~~L~lVl~yY~~Si~Ltf~~~~~~~----~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt   90 (349)
T KOG1443|consen   15 VLTLALVLLYYFLSIGLTFYFKWLTK----NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT   90 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhc----CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence            45666779999999999888888877    89999999999999988887777766555443   368899999999999


Q ss_pred             HHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHHH
Q 016904           87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQV  166 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~l  166 (380)
                      ++..++..++.||+++|+|.+.+++.+++.++|+.+++.++.-||+++.-.+.++++.+|+++.++.+.+++..|..+++
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~  170 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVL  170 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCC-CCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccc------cch----hhHHHHHHHH
Q 016904          167 TGIVAEALRLVLTQVLLQKKG-LTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVS------QIQ----FNFWIFFSNA  235 (380)
Q Consensus       167 ~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~  235 (380)
                      +++++.++++.+.+.++++.+ .+-+|...+++.++...+.++|..+..|++.....      ...    .....+..+|
T Consensus       171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g  250 (349)
T KOG1443|consen  171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG  250 (349)
T ss_pred             HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence            999999999999999999876 34589999999999999999999998998765411      111    1123456788


Q ss_pred             HHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHH
Q 016904          236 LCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMY  299 (380)
Q Consensus       236 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~  299 (380)
                      ..++..-.+.+..+.+++..+.++.+..+.+.+.+++..+. ++.++..+|.|..+++.|+..+
T Consensus       251 ~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~-~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  251 LLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIIL-KDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHh-hcchhhhHHHHHHHHHHHHHHh
Confidence            88998888899999999999999999999999999999999 5569999999999999999987

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.97  E-value=6.5e-28  Score=223.57  Aligned_cols=281  Identities=12%  Similarity=0.107  Sum_probs=208.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhH
Q 016904            7 KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPI   86 (380)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (380)
                      |+.+...+..++-.+.+.+.....|...+    +.+ |..++++|++++.+++.++....++ +  +.++++ ++.....
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~----~~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~--~~~~~~-~~~~~~~   74 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVIRIGVE----SWP-PLMMAGVRFLIAGILLLAFLLLRGH-P--LPTLRQ-WLNAALI   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhc----cCC-HHHHHHHHHHHHHHHHHHHHHHhCC-C--CCcHHH-HHHHHHH
Confidence            44444444444444555556668899998    888 9999999999999888777653221 1  223444 3444445


Q ss_pred             HHH-HHHHHHHHhhhh-hcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec-cceehHHHHH
Q 016904           87 SAF-FASSLWFGNTAY-LHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG-EIHFNIVGTL  163 (380)
Q Consensus        87 ~~~-~~~~~~~~~~al-~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~-~~~~~~~G~~  163 (380)
                      |.+ ....+.+.+++. ++++++.++++.++.|+++++++.+ +|||++++++++++++++|+.++..+ +.+.+..|++
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l  153 (292)
T PRK11272         75 GLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAI  153 (292)
T ss_pred             HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHH
Confidence            554 456677888898 9999999999999999999999986 69999999999999999999887654 2344567999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHH
Q 016904          164 YQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNF  243 (380)
Q Consensus       164 l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (380)
                      ++++++++||++.+..||..++     ++.....++..++.+.+.+.....+.+...........+++..+.+.+...+.
T Consensus       154 ~~l~a~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~  228 (292)
T PRK11272        154 LILIASASWAFGSVWSSRLPLP-----VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAIS  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCC-----cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999986332     33445667777777777666554333211111111222233333334445566


Q ss_pred             HHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          244 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       244 ~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      ++++++++.++.+++.+.+++|+++.+++++++ +|++++.+++|+++++.|+++.++.+
T Consensus       229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l-~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLG-GETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            788899999999999999999999999999999 77799999999999999999876643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=1.1e-27  Score=222.26  Aligned_cols=271  Identities=15%  Similarity=0.127  Sum_probs=197.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhH
Q 016904            7 KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPI   86 (380)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (380)
                      |+.+.....+++|...    ....|..++    ++| |+.+.++|+.++.+++.++..   +++.++.+    ++..+..
T Consensus         4 ~~~l~~l~a~~~Wg~~----~~~~k~~~~----~~~-P~~~~~~R~~~a~l~l~~~~~---~~~~~~~~----~~~~~~~   67 (295)
T PRK11689          4 KATLIGLIAILLWSTM----VGLIRGVSE----SLG-PVGGAAMIYSVSGLLLLLTVG---FPRLRQFP----KRYLLAG   67 (295)
T ss_pred             chhHHHHHHHHHHHHH----HHHHHHHHc----cCC-hHHHHHHHHHHHHHHHHHHcc---cccccccc----HHHHHHH
Confidence            4455555666777655    447799999    899 999999999999888776531   11111111    2334445


Q ss_pred             HHHHHHHHHHHhhhhhc----ccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccce------
Q 016904           87 SAFFASSLWFGNTAYLH----ISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIH------  156 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~----~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~------  156 (380)
                      ++.+.....+.+.+++|    ++++.++++.++.|+++.+++++++|||++++++++++++++|++++..++..      
T Consensus        68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  147 (295)
T PRK11689         68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL  147 (295)
T ss_pred             hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh
Confidence            55566677777777754    57788899999999999999999999999999999999999999988765421      


Q ss_pred             -----ehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHH
Q 016904          157 -----FNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIF  231 (380)
Q Consensus       157 -----~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~  231 (380)
                           .+..|++++++++++||.|.++.||..++    .++.....   ..+.+.+.+.....+.+.. ...+.. +..+
T Consensus       148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~----~~~~~~~~---~~~~~~l~~~~~~~~~~~~-~~~~~~-~~~l  218 (295)
T PRK11689        148 INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG----KNGITLFF---ILTALALWIKYFLSPQPAM-VFSLPA-IIKL  218 (295)
T ss_pred             hhccccChHHHHHHHHHHHHHHHHHHHHhhccCC----CCchhHHH---HHHHHHHHHHHHHhcCccc-cCCHHH-HHHH
Confidence                 23569999999999999999999998543    35544322   2223333333333222211 112222 2223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          232 FSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       232 ~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      ++.++.+...+.++++++++.+|..++.+.+++|+++++++++++ ||++++.+++|+++|+.|+++..+.+
T Consensus       219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~l-gE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLL-STPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHh-CCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            344556666778899999999999999999999999999999999 77799999999999999998876543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=1.2e-26  Score=215.79  Aligned_cols=277  Identities=13%  Similarity=0.183  Sum_probs=197.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhH
Q 016904            7 KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPI   86 (380)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (380)
                      ++.+..++..++|...+.    ..|..++    +++ |..+.++|++++++++.++.+  +    ++.+++    ..+..
T Consensus         4 ~~~l~~l~~~~~Wg~~~~----~~k~~~~----~~~-p~~~~~~R~~~a~~~l~~~~~--~----~~~~~~----~~~~~   64 (299)
T PRK11453          4 KDGVLALLVVVVWGLNFV----VIKVGLH----NMP-PLMLAGLRFMLVAFPAIFFVA--R----PKVPLN----LLLGY   64 (299)
T ss_pred             HHHHHHHHHHHHHhhhHH----HHHHHHh----cCC-HHHHHHHHHHHHHHHHHHHhc--C----CCCchH----HHHHH
Confidence            444555666677766544    6688888    888 999999999998766554432  1    122222    22333


Q ss_pred             HHHH-HHHHHHHhhhhhc-ccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---ceehHHH
Q 016904           87 SAFF-ASSLWFGNTAYLH-ISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---IHFNIVG  161 (380)
Q Consensus        87 ~~~~-~~~~~~~~~al~~-~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---~~~~~~G  161 (380)
                      +++. .....+++.+++| +|++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++   ...++.|
T Consensus        65 g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G  144 (299)
T PRK11453         65 GLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLG  144 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHH
Confidence            4433 3444567788887 689999999999999999999999999999999999999999999887542   2234679


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcc-----ccccchhhHHHHHHHHH
Q 016904          162 TLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-----EVSQIQFNFWIFFSNAL  236 (380)
Q Consensus       162 ~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  236 (380)
                      ++++++++++|+.+.++.|+..++. ...+......+....+.+.........+++..     ....+.....++..+.+
T Consensus       145 ~~l~l~aal~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~  223 (299)
T PRK11453        145 FMLTLAAAFSWACGNIFNKKIMSHS-TRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFV  223 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHH
Confidence            9999999999999999999975542 12233344455555544433333333343221     01111122223333344


Q ss_pred             HHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          237 CALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       237 ~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      .+.+.+.++++++++.++.+++.+.+++|+++.+++++++ ||++++.+++|++++++|+++..+.++
T Consensus       224 ~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~l-gE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        224 ATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLL-DERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHh-CCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            4445566688899999999999999999999999999999 777999999999999999998766543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=7.3e-27  Score=216.90  Aligned_cols=275  Identities=9%  Similarity=0.103  Sum_probs=194.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCc---ccHHhhhHHhhh
Q 016904            9 LVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVK---MTFEIYATCVVP   85 (380)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~   85 (380)
                      .+..++..++|...    ....|.. .    +++ |..+.++|++++.+++.++....++.+..+   .++++ +...+.
T Consensus        10 ~~~~l~a~~~wg~~----~~~~k~~-~----~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   78 (296)
T PRK15430         10 VLLALAAYFIWGIA----PAYFKLI-Y----YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQK-IFMLAV   78 (296)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHh-c----CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHH-HHHHHH
Confidence            34444445555444    3455874 5    588 999999999999887766554322211101   12333 233345


Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHH
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQ  165 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~  165 (380)
                      .++..+....++++|++++|++.++++.++.|+++++++++++|||+++++|++++++++|++++..++.+.    ..++
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~  154 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIA  154 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHH
Confidence            566777889999999999999999999999999999999999999999999999999999999876543222    2568


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchh-hHHHHHHHHHHHHHHHHH
Q 016904          166 VTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQF-NFWIFFSNALCALALNFS  244 (380)
Q Consensus       166 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  244 (380)
                      ++++++||+|.++.|+..+++  ..+......+...++.+...+..   +.+.......+. .+..++..++.+...+.+
T Consensus       155 l~aa~~~a~~~i~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~  229 (296)
T PRK15430        155 LGLAFSFAFYGLVRKKIAVEA--QTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGIVTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCCC--chhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999998863321  12333334444444443322221   111111111111 122334445566677788


Q ss_pred             HHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          245 IFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       245 ~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      ++.++++.+|..++.+.+++|++++++|++++ ||++++.+++|+++|++|+.+......
T Consensus       230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l-~E~~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFY-GEKPGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999 778999999999999999888765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.96  E-value=3.9e-26  Score=211.75  Aligned_cols=260  Identities=8%  Similarity=0.005  Sum_probs=192.6

Q ss_pred             HHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhh
Q 016904           20 ILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNT   99 (380)
Q Consensus        20 ~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (380)
                      .+++.......|+.++    +++ |..+.++|++++.+++.++.+. +   +.+.++|+ ++..+..+++.+..+.+.++
T Consensus        21 ~~~~~~~~~~~K~~~~----~~~-~~~~~~~R~~~a~l~l~~~~~~-~---~~~~~~~~-~~~~~~~g~~~~~~~~~~~~   90 (293)
T PRK10532         21 MASIQSGASLAKSLFP----LVG-APGVTALRLALGTLILIAIFKP-W---RLRFAKEQ-RLPLLFYGVSLGGMNYLFYL   90 (293)
T ss_pred             HHHHHhhHHHHHHHHH----HcC-HHHHHHHHHHHHHHHHHHHHhH-H---hccCCHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            3333334447899999    888 9999999999999888766532 1   11234555 45556667777778888999


Q ss_pred             hhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---ceehHHHHHHHHHHHHHHHHHH
Q 016904          100 AYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---IHFNIVGTLYQVTGIVAEALRL  176 (380)
Q Consensus       100 al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---~~~~~~G~~l~l~s~~~~a~~~  176 (380)
                      +++|+|++.++++.++.|+++++++    +|++++  +.++.++++|+.++...+   .+.+..|++++++++++||.|.
T Consensus        91 al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~  164 (293)
T PRK10532         91 SIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYI  164 (293)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999887    355554  445677889998876432   2345679999999999999999


Q ss_pred             HHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Q 016904          177 VLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVT  256 (380)
Q Consensus       177 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~  256 (380)
                      ++.|+..++    .++... .+...++++.+.|.....+. .. ...+....+.+..+.+.+.+.+.++++++++.+|.+
T Consensus       165 v~~r~~~~~----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~-~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~  237 (293)
T PRK10532        165 LSGQRAGAE----HGPATV-AIGSLIAALIFVPIGALQAG-EA-LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRT  237 (293)
T ss_pred             HHHHHHhcc----CCchHH-HHHHHHHHHHHHHHHHHccC-cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH
Confidence            999998554    355554 45556666666666554332 11 111111112334444445556667889999999999


Q ss_pred             HHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          257 IRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       257 ~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      ++++.+++|+++.++|++++ ||++++.+++|+++|++|...+.+..
T Consensus       238 as~~~~l~Pv~a~l~~~l~l-gE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        238 FGTLMSMEPALAAVSGMIFL-GETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHhHHHHHHHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999 77799999999999999999987554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.1e-26  Score=214.61  Aligned_cols=291  Identities=15%  Similarity=0.179  Sum_probs=220.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccC-CCcccHHhhhHHhh
Q 016904            6 NKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS-PVKMTFEIYATCVV   84 (380)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~   84 (380)
                      +|+.+...+..-+-.++..+....+..+-+  . +++.|.+.+++-++.-.++.......++..+ ..+..+++ +++.+
T Consensus         8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~--~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~-~w~y~   83 (334)
T PF06027_consen    8 TRRFWIVLLLGQVLSLCITGTGTFSSLLAN--K-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRP-WWKYF   83 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHh--c-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchh-HHHHH
Confidence            344444333333333333444445566655  2 6777899888888765554444333222211 12223344 34455


Q ss_pred             hHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc---------
Q 016904           85 PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI---------  155 (380)
Q Consensus        85 ~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~---------  155 (380)
                      ..+++...++++.+.|++|++.+.++++.+++.+++++++++++|+|+++.+++|++++++|++++...|.         
T Consensus        84 lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~  163 (334)
T PF06027_consen   84 LLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSG  163 (334)
T ss_pred             HHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCC
Confidence            66899999999999999999999999999999999999999999999999999999999999998887652         


Q ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHH-HHH
Q 016904          156 HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIF-FSN  234 (380)
Q Consensus       156 ~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~  234 (380)
                      +....|++++++|+++||+++|++|+..++    .+..+.+.+.++++.++..+.....|........|....+.. +..
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~----~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~  239 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK----APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY  239 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH
Confidence            234799999999999999999999999886    478899999999999998888777776665544444443333 333


Q ss_pred             HHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhh
Q 016904          235 ALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK  305 (380)
Q Consensus       235 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~  305 (380)
                      +++-+..+...-..++..+|+...+-.....+.++++++++| ++++++..++|.++|++|.++|+..+.+
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f-~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFF-GYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhc-CccccHHHHHHHHHHHHHhheEEccCCc
Confidence            444455555566689999999999988889999999999999 6679999999999999999999876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.96  E-value=4.5e-26  Score=212.25  Aligned_cols=272  Identities=22%  Similarity=0.400  Sum_probs=219.6

Q ss_pred             HHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccH
Q 016904           27 ILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISV  106 (380)
Q Consensus        27 ~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  106 (380)
                      .+..+.+..++ ++.++|.++++.|++...++..+.....+..++++.++    +..++.++++.++..+.|.|++|+|.
T Consensus        16 g~~qE~i~~~~-~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   16 GILQEKIMTTP-YGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPL----KKYAILSFLFFLASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHHHHcCC-CCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChH----HHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence            34555555533 22257999999999998887777665444233444444    44577889999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccce----e------hHHHHHHHHHHHHHHHHHH
Q 016904          107 AFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIH----F------NIVGTLYQVTGIVAEALRL  176 (380)
Q Consensus       107 ~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~----~------~~~G~~l~l~s~~~~a~~~  176 (380)
                      ++.++++++.|+++++++.+++|||+++++++++++..+|+++....+..    .      ...|+++.+++.++.|+..
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998875421    1      1249999999999999999


Q ss_pred             HHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhh--cCCccc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016904          177 VLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLL--EKPMME---VSQIQFNFWIFFSNALCALALNFSIFLVIGR  251 (380)
Q Consensus       177 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  251 (380)
                      ++++|..++++  .++.++++|.+.++.+..++.....  +.....   ....+..++.++..+++++..+...+..+++
T Consensus       171 ~~qe~~~~~~~--~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~  248 (303)
T PF08449_consen  171 VYQEKLFKKYG--KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKK  248 (303)
T ss_pred             HHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999988753  6789999999999998887776652  111111   1122233455666778888888888889999


Q ss_pred             cchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhh
Q 016904          252 TGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKD  306 (380)
Q Consensus       252 ~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~  306 (380)
                      .+|.+.++.+.+++++++++++++| ++++++.||+|.++++.|..++.+.++|+
T Consensus       249 ~~al~~t~v~t~Rk~~sillS~~~f-~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  249 FSALTTTIVTTLRKFLSILLSVIIF-GHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             cCchhhhhHHHHHHHHHHHHHHHhc-CCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            9999999999999999999999999 56799999999999999999999876543

; GO: 0055085 transmembrane transport

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=9.7e-26  Score=205.78  Aligned_cols=254  Identities=15%  Similarity=0.080  Sum_probs=197.6

Q ss_pred             HHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccH
Q 016904           27 ILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISV  106 (380)
Q Consensus        27 ~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  106 (380)
                      ....|+.++    +...|..+.+.|++++.+++.++.+. +      .+.+++.+.....+++..+...+++.|++|+|+
T Consensus         5 ~~~~k~~~~----~~~~~~~~~~~r~~~~~l~l~~~~~~-~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         5 GVVIGQYLE----GQVPLYFAVFRRLIFALLLLLPLLRR-R------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             HHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHh-c------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            346788887    43338999999999887777665442 1      233443455555556778888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc-ceehHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016904          107 AFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE-IHFNIVGTLYQVTGIVAEALRLVLTQVLLQK  185 (380)
Q Consensus       107 ~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~-~~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~  185 (380)
                      +.++++.++.|+++++++.+++|||++++++.++.++++|+.++..++ .+.+..|++++++++++|+.+.++.|+..++
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~  153 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK  153 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence            999999999999999999999999999999999999999998876543 3456789999999999999999999998654


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhh
Q 016904          186 KGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKD  265 (380)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~  265 (380)
                      .  +.++.....+...++.+++.+.....+.... . ......+++..+.+.....+.++++++++.++.+++.+.+++|
T Consensus       154 ~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~p  229 (260)
T TIGR00950       154 E--GPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-A-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEP  229 (260)
T ss_pred             C--CchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-c-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            2  1224445556677787777777665433221 1 1212223344444445566777889999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCcchhhhHHHHHHHHHH
Q 016904          266 WILIALSTVIFPESTITGLNIIGYAIALCGV  296 (380)
Q Consensus       266 v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~  296 (380)
                      +++++++++++ +|++++.+++|.++++.|+
T Consensus       230 v~~~ll~~~~~-~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       230 LVALLLGLLIL-GETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHh-CCCCCHHHHHHHHHHHHhc
Confidence            99999999999 7789999999999999986

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=7.3e-26  Score=201.74  Aligned_cols=296  Identities=21%  Similarity=0.328  Sum_probs=249.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhH
Q 016904            7 KPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPI   86 (380)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (380)
                      ++........+.|+++++.+++.||++++  .++||.-+++..+|.+...+.+...- ..|..+.++++++. .|+++|.
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls--~y~f~~~l~l~~~Q~l~s~~~v~~lk-~~~lv~~~~l~~~~-~kk~~P~   83 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLS--SYNFPMGLLLMLLQSLASVLVVLVLK-RLGLVNFRPLDLRT-AKKWFPV   83 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHH-HhceeecCCcChHH-HHHHccH
Confidence            34455677899999999999999999999  44444344445599997766665543 35656677788888 7999999


Q ss_pred             HHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHHH
Q 016904           87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQV  166 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~l  166 (380)
                      .+.+.++.+....+++|+++++.+++++.+|+++++.+..++|.+++...|.++....+|......+|..++..|..|++
T Consensus        84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~  163 (314)
T KOG1444|consen   84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWAL  163 (314)
T ss_pred             HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCc-cc--cccch--hhHHHHHHHHHHHHHH
Q 016904          167 TGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPM-ME--VSQIQ--FNFWIFFSNALCALAL  241 (380)
Q Consensus       167 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~--~~~~~--~~~~~~~~~~~~~~~~  241 (380)
                      ..+++.+.+.++.|+-.+..  +.+.+.+++|.++...+.+.....+.++.. ..  ...|.  ..+..+.++++++++.
T Consensus       164 ~n~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~i  241 (314)
T KOG1444|consen  164 ANCLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGI  241 (314)
T ss_pred             HHHHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHH
Confidence            99999999999999987754  367889999999999888877776665533 11  11121  2234567899999999


Q ss_pred             HHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhhhhh
Q 016904          242 NFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRA  309 (380)
Q Consensus       242 ~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~~~~  309 (380)
                      +++.+++.+..++++.++++ .+-.+.+.++.+++||+++++..++|..+-+.|..+|++.+.++++.
T Consensus       242 sy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  242 SYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            99999999999999999999 77777788888888899999999999999999999999987665443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.92  E-value=3.6e-23  Score=190.86  Aligned_cols=269  Identities=10%  Similarity=-0.001  Sum_probs=185.5

Q ss_pred             HHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhh
Q 016904           21 LLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTA  100 (380)
Q Consensus        21 ~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  100 (380)
                      ++........|...+    +-+ +  ..++++..+.+++.++.......+..+...++++...+..++.......+.+.|
T Consensus        11 ~~~a~~~~~~k~~~~----~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   83 (281)
T TIGR03340        11 LMHAGWNLMAKSHAD----KEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQA   83 (281)
T ss_pred             HHHHHHHHHHhhcCC----chh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            333444556676666    322 4  346777766666666554321122222223343455566666777888999999


Q ss_pred             hhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc-eehHHHHHHHHHHHHHHHHHHHHH
Q 016904          101 YLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI-HFNIVGTLYQVTGIVAEALRLVLT  179 (380)
Q Consensus       101 l~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~-~~~~~G~~l~l~s~~~~a~~~v~~  179 (380)
                      +++.|++.++.+.++.|+++.+++++++|||+++++|+|+.++++|+.++..++. ..+..|+.++++++++|+.|.++.
T Consensus        84 ~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~  163 (281)
T TIGR03340        84 YHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSD  163 (281)
T ss_pred             HhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999988765432 345678889999999999999988


Q ss_pred             HHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 016904          180 QVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRV  259 (380)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~  259 (380)
                      |+..++.+...+......+......+.+.+.....+..... ......+..+..+++.+...+.++++++++.++..++.
T Consensus       164 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~  242 (281)
T TIGR03340       164 KAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVA  242 (281)
T ss_pred             cccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEe
Confidence            87633221111222222222222211122221111211111 11112233445566667777778999999999999999


Q ss_pred             hhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHH
Q 016904          260 AGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVM  298 (380)
Q Consensus       260 ~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~  298 (380)
                      +.+++|++++++|++++ +|+++..+++|++++++|+.+
T Consensus       243 ~~~l~pv~a~l~g~~~l-gE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       243 LRNTSIVFAVVLGIWFL-NERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             ecccHHHHHHHHHHHHh-CCCccHHHHHHHHHHHHhHHh
Confidence            99999999999999999 778999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.92  E-value=1.8e-22  Score=183.74  Aligned_cols=247  Identities=8%  Similarity=0.053  Sum_probs=167.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCC-----CcccHHhhhHHh
Q 016904            9 LVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSP-----VKMTFEIYATCV   83 (380)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~   83 (380)
                      .+...+..++|...    ....|. +.    +++ |..+.++|++++.+++.++....++++.     ++.++++++...
T Consensus         4 ~~~~i~a~~~wg~~----~~~~k~-~~----~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (256)
T TIGR00688         4 IIVSLLASFLFGYM----YYYSKL-LK----PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL   73 (256)
T ss_pred             HHHHHHHHHHHHHH----HHHHHH-hc----cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence            34444455556554    446787 56    588 9999999999998887665543332111     111222223345


Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHH
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTL  163 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~  163 (380)
                      ...+++.+....++++|+++++++.++++.++.|+++++++++++|||+++++|++++++++|++++..++.+.+    .
T Consensus        74 ~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~  149 (256)
T TIGR00688        74 LLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----W  149 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----H
Confidence            566777788899999999999999999999999999999999999999999999999999999998755432222    4


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHH
Q 016904          164 YQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNF  243 (380)
Q Consensus       164 l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (380)
                      ++++++++||.|.+..|+..++     +....... .........+.....+.+..........+..++..++++...+.
T Consensus       150 ~~l~aa~~~a~~~i~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~i~~~  223 (256)
T TIGR00688       150 EALVLAFSFTAYGLIRKALKNT-----DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLITGTPLL  223 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCC-----CcchHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHHHHHHHH
Confidence            5788999999999999986332     22222211 11111121111111121111111111122333344455777888


Q ss_pred             HHHHHHhhcchhHHHHhhhhhhHHHHHHHHHh
Q 016904          244 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVI  275 (380)
Q Consensus       244 ~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~  275 (380)
                      +++.++++.++.+++.+.+++|++++++++++
T Consensus       224 l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       224 AFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=4.4e-20  Score=170.76  Aligned_cols=272  Identities=15%  Similarity=0.161  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHH
Q 016904           15 YLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSL   94 (380)
Q Consensus        15 ~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (380)
                      ..+++...+.......|...+    +...+....+.|++++.++...... .++....+... ++++..+..++......
T Consensus        11 ~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   84 (292)
T COG0697          11 ALLLWGLLWGLSFIALKLAVE----SLDPFLFAAALRFLIAALLLLPLLL-LEPRGLRPALR-PWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc----ccCChHHHHHHHHHHHHHHHHHHHH-hhccccccccc-chHHHHHHHHHHHHHHH
Confidence            344444444444445666666    3232666667799988777333332 11111111111 12355566666777888


Q ss_pred             HHHhhhhhcccHhHHHHHHHHHHHHHHHHHH-HhccccccHhHHHHHHHHHhhhheeeeccceeh---HHHHHHHHHHHH
Q 016904           95 WFGNTAYLHISVAFIQMLKALMPVATFFMAV-LCGTDKARLDVFLNMVLVSVGVVISSYGEIHFN---IVGTLYQVTGIV  170 (380)
Q Consensus        95 ~~~~~al~~~~~~~~~il~~~~pi~v~ll~~-~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~---~~G~~l~l~s~~  170 (380)
                      .+++.++++++++.++++.++.|+++.+++. +++|||++++++.++++.++|+.++..++...+   ..|+.+++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~  164 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAAL  164 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999996 777999999999999999999999998765443   589999999999


Q ss_pred             HHHHHHHHHHHHhhhCCCCCCHHHHHH-HHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHH-HHHHHHHHH
Q 016904          171 AEALRLVLTQVLLQKKGLTLNPITSLY-YIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCAL-ALNFSIFLV  248 (380)
Q Consensus       171 ~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  248 (380)
                      ++|++.++.|+.. +    .++..... +..........+.. ..+.+  . ......+..+...+++.. ..+.+++.+
T Consensus       165 ~~a~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~g~~~~~i~~~~~~~~  235 (292)
T COG0697         165 LWALYTALVKRLS-R----LGPVTLALLLQLLLALLLLLLFF-LSGFG--A-PILSRAWLLLLYLGVFSTGLAYLLWYYA  235 (292)
T ss_pred             HHHHHHHHHHHhc-C----CChHHHHHHHHHHHHHHHHHHHH-hcccc--c-cCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999886 2    35555555 33331111111221 11211  1 111122333333344433 467778899


Q ss_pred             HhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          249 IGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       249 i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      +++.++...+.+.+++|+.+++++++++ +|+++..+++|+++++.|+.+....
T Consensus       236 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~-~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         236 LRLLGASLVALLSLLEPVFAALLGVLLL-GEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHhcCchHHHHHHHHHHHHHHHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999 7779999999999999999987654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.88  E-value=2.6e-21  Score=162.60  Aligned_cols=284  Identities=18%  Similarity=0.262  Sum_probs=233.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHH
Q 016904           14 LYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASS   93 (380)
Q Consensus        14 ~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (380)
                      ...+.|.+.++.|++.||++++  ..+|+..+.+.+.|-+++.+.+..+-. .|..+.   ..++ .+.+++.+++...+
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls--~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~f---R~t~-aK~WfpiSfLLv~M   81 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLS--NLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEF---RLTK-AKKWFPISFLLVVM   81 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheec--CCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhe---ehhh-hhhhcCHHHHHHHH
Confidence            3577899999999999999999  555555688889999887766655432 332222   2333 46678999999999


Q ss_pred             HHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceeh-------HHHHHHHH
Q 016904           94 LWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFN-------IVGTLYQV  166 (380)
Q Consensus        94 ~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~-------~~G~~l~l  166 (380)
                      .+....+++|++++.++++++++.+.++..+..|+|.|++..+..+.++.+..-+...++|.+..       -.|.+|+.
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~  161 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMF  161 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEe
Confidence            99999999999999999999999999999999999999999999999999999988888875321       25999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccc--cccchh-hHHHHHHHHHHHHHHHH
Q 016904          167 TGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMME--VSQIQF-NFWIFFSNALCALALNF  243 (380)
Q Consensus       167 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~  243 (380)
                      ..++..+.+....|+-.+-.  +....+.++|.++.+..+++...++.|++...  ...... .+...+.+|+++++..+
T Consensus       162 ~NclssaafVL~mrkri~lt--Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         162 TNCLSSAAFVLIMRKRIKLT--NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hhhHhHHHHHHHHHHhhccc--ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence            99999999988888765532  24568899999999999998888888876554  222222 23345778999999999


Q ss_pred             HHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhhh
Q 016904          244 SIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDV  307 (380)
Q Consensus       244 ~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~~  307 (380)
                      +.-|+++.++.++.++++.++.....+.|.++| |++.+...+..+.+-..+..+|.+.+.+++
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvff-dap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFF-DAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999 888999999999998888888888766543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.88  E-value=2e-23  Score=180.45  Aligned_cols=292  Identities=19%  Similarity=0.246  Sum_probs=242.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhcc------CCCcccHHhhhHHhhhHH
Q 016904           14 LYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVV------SPVKMTFEIYATCVVPIS   87 (380)
Q Consensus        14 ~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   87 (380)
                      .....+..+++++.+.||.++.......+.|.+++++|.++...++..+.+..++.      +..+++.+. .+.+++.+
T Consensus        31 ~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t-~r~vlpls  109 (347)
T KOG1442|consen   31 SAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLAT-ARQVLPLS  109 (347)
T ss_pred             hhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHH-HHhhcchh
Confidence            34556668899999999999996556778899999999999988877766543322      122345555 68889999


Q ss_pred             HHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---ceehHHHHHH
Q 016904           88 AFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---IHFNIVGTLY  164 (380)
Q Consensus        88 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---~~~~~~G~~l  164 (380)
                      +.+.++..+.|++++|++++++.+-++++.+|+.+++++++|+|-+..-..+.++++.|..+-+..|   ...++.|+++
T Consensus       110 vVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gvif  189 (347)
T KOG1442|consen  110 VVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIF  189 (347)
T ss_pred             heeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHH
Confidence            9999999999999999999999999999999999999999999999999999999999998887766   4567999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccc---cccchhhHH-HHHHHHHHHHH
Q 016904          165 QVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMME---VSQIQFNFW-IFFSNALCALA  240 (380)
Q Consensus       165 ~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~  240 (380)
                      ++.|+++-|+..++.||.+...+  ..-+.+.+|+++.++++.+|...+.+.....   +..+...+| ++.++|++++.
T Consensus       190 GVlaSl~vAlnaiytkk~l~~v~--~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~  267 (347)
T KOG1442|consen  190 GVLASLAVALNAIYTKKVLPPVG--DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA  267 (347)
T ss_pred             HHHHHHHHHHHHHhhheeccccc--CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence            99999999999999998654422  2457788899999988888876654322111   122333344 56789999999


Q ss_pred             HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhhhhh
Q 016904          241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRA  309 (380)
Q Consensus       241 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~~~~  309 (380)
                      +++...+-+|-++|.++.+.+..+....+++++.++ +|..+..-|-|-+++++|...|.+.|+.++++
T Consensus       268 mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y-~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  268 MGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYY-SETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             hhheeeEEEEecccceeeecHhHHHHHHHHHHHHHH-HHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999 77799999999999999999999988877765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.85  E-value=2.3e-20  Score=158.08  Aligned_cols=255  Identities=16%  Similarity=0.233  Sum_probs=204.4

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHH
Q 016904           39 FNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPV  118 (380)
Q Consensus        39 ~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi  118 (380)
                      -.|.|.+.+.+.|.....++.-.+..+++   ..+.+... -+.....++.|.+.+...|.|++|+|.++..+-+++.||
T Consensus        48 E~FTfalaLVf~qC~~N~vfAkvl~~ir~---~~~~D~t~-~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPI  123 (337)
T KOG1580|consen   48 EKFTFALALVFFQCTANTVFAKVLFLIRK---KTEIDNTP-TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPI  123 (337)
T ss_pred             heehHHHHHHHHHHHHHHHHHHhheeecc---cccccCCc-chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCc
Confidence            35778899999999988877765554322   22333322 344566788889999999999999999999999999999


Q ss_pred             HHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc-------eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCC
Q 016904          119 ATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI-------HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLN  191 (380)
Q Consensus       119 ~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~-------~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~  191 (380)
                      -++++++++.|++++++++..++++++|+++..+.+.       .....|-++.+.|.-..++....++|+-+..  .-+
T Consensus       124 PVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y--q~~  201 (337)
T KOG1580|consen  124 PVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY--QRT  201 (337)
T ss_pred             ceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh--ccC
Confidence            9999999999999999999999999999999988642       1224799999999999999999999984432  336


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHH
Q 016904          192 PITSLYYIAPCSFVFLFVPWYLLEKPMME----VSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWI  267 (380)
Q Consensus       192 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~  267 (380)
                      ...++.++++.+.+.+....++. +..++    ....+..+|-+..-++++...+.+.|..+...+|.+.|+++..+..+
T Consensus       202 g~~MM~~~NlwStL~Lg~g~lfT-GElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF  280 (337)
T KOG1580|consen  202 GTSMMFYTNLWSTLYLGAGLLFT-GELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF  280 (337)
T ss_pred             chhhHHHHHHHHHHHhhhhheeh-hhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence            67899999999988776555432 22121    22344556666666777888888889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          268 LIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       268 ~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      +++.++++| +.+++..||+|.++++.|...-..
T Consensus       281 Til~SVllf-~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  281 TILISVLLF-NNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHh-cCcCcHHHHHHHHHHHHHhhhHhh
Confidence            999999999 777999999999999999876544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.84  E-value=6.1e-18  Score=149.26  Aligned_cols=260  Identities=17%  Similarity=0.167  Sum_probs=210.5

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHH
Q 016904           39 FNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPV  118 (380)
Q Consensus        39 ~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi  118 (380)
                      -+|.+|.++.+.|-+.+.++-.....+.+.....+.+    ++.....++....+.++.+.|++|++.++..+-+++--+
T Consensus        46 ~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~ap----l~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmI  121 (327)
T KOG1581|consen   46 ERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAP----LYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMI  121 (327)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCc----hhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhh
Confidence            4677799999999999888876665543333223333    455567788888999999999999999999999999999


Q ss_pred             HHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---------ceehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 016904          119 ATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---------IHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLT  189 (380)
Q Consensus       119 ~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---------~~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~  189 (380)
                      .++++..++.++|++..+++...++..|+.+....+         ....+.|+.+.....+..++-+..++++.++  .+
T Consensus       122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k  199 (327)
T KOG1581|consen  122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK--YK  199 (327)
T ss_pred             HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc--CC
Confidence            999999999999999999999999999998876632         1245799999999999999999999999885  46


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhcCCccc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhH
Q 016904          190 LNPITSLYYIAPCSFVFLFVPWYLLEKPMME---VSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDW  266 (380)
Q Consensus       190 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v  266 (380)
                      +++..++++.+++.++.-..-....+.....   ....+..++-++.-++++...+...+.-+++.|+.+.+.++..+.+
T Consensus       200 ~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~  279 (327)
T KOG1581|consen  200 VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKM  279 (327)
T ss_pred             ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHH
Confidence            8999999999999987766553322211111   1223333444555577777788888889999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhh
Q 016904          267 ILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK  305 (380)
Q Consensus       267 ~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~  305 (380)
                      ++++++.+.| ++++++.||+|..+++.|+.+-.+.+.+
T Consensus       280 ~si~lS~i~f-~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  280 VSIMLSCIVF-GHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHh-CCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999 6679999999999999999987665554

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.83  E-value=2.8e-18  Score=147.34  Aligned_cols=249  Identities=11%  Similarity=0.070  Sum_probs=192.6

Q ss_pred             HHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhH
Q 016904           29 YNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAF  108 (380)
Q Consensus        29 ~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~  108 (380)
                      +.|.++.    .+. |.-.+.+|..+++++++.+.+-++    .+.++++ +..++..|...+.++.++|.+++.+|.+.
T Consensus        30 ~Ak~LFP----~vG-~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~-~~~~~~yGvsLg~MNl~FY~si~riPlGi   99 (292)
T COG5006          30 FAKSLFP----LVG-AAGVTALRLAIAALILLALFRPWR----RRLSKPQ-RLALLAYGVSLGGMNLLFYLSIERIPLGI   99 (292)
T ss_pred             HHHHHcc----ccC-hhhHHHHHHHHHHHHHHHHhhHHH----hccChhh-hHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence            5688888    777 999999999999999988876333    3455666 57778889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---ceehHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016904          109 IQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---IHFNIVGTLYQVTGIVAEALRLVLTQVLLQK  185 (380)
Q Consensus       109 ~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---~~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~  185 (380)
                      +..+-++-|+.+++++-    +|  .+..+-+.+.+.|+.++.-.+   .+.|..|..+++++..||+.|.+..+|.-+.
T Consensus       100 AVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~  173 (292)
T COG5006         100 AVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA  173 (292)
T ss_pred             hhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc
Confidence            99999999999988753    33  445555666777776654432   5678999999999999999999999998543


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHH-HHHHHHHHHhhcchhHHHHhhhhh
Q 016904          186 KGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA-LNFSIFLVIGRTGAVTIRVAGVLK  264 (380)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~a~~~s~~~~l~  264 (380)
                          .+...-+.+.+.++.++.+|+.....++...  .+.. ..+.+..++++.. -+.+-..++++.++.+.+++..+|
T Consensus       174 ----~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~--~p~l-l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLe  246 (292)
T COG5006         174 ----EHGTAGVAVGMLVAALIVLPIGAAQAGPALF--SPSL-LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLE  246 (292)
T ss_pred             ----CCCchHHHHHHHHHHHHHhhhhhhhcchhhc--ChHH-HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhh
Confidence                3566677778888898888988755444332  1111 1122222333332 334456689999999999999999


Q ss_pred             hHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          265 DWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       265 ~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      |.++.+.|++++ ||.+|+.||+|+++|+.+..-..+
T Consensus       247 Pa~aAl~G~i~L-~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         247 PALAALSGLIFL-GETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHhcccc
Confidence            999999999999 777999999999999998875444

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.83  E-value=3e-17  Score=144.91  Aligned_cols=276  Identities=12%  Similarity=0.094  Sum_probs=204.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCC---cccHHhhhHHhhhHHHHHH
Q 016904           15 YLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPV---KMTFEIYATCVVPISAFFA   91 (380)
Q Consensus        15 ~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   91 (380)
                      ..+..++.+..+.++.|.+-.     .| +..+...|.+.+..++..+....|+.+..   ..++|. +......++..+
T Consensus        11 ~~l~Ay~lwG~lp~y~kll~~-----~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~-~~~~~l~a~li~   83 (293)
T COG2962          11 LALLAYLLWGLLPLYFKLLEP-----LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKT-LLMLALTALLIG   83 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHcc-----CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHH-HHHHHHHHHHHH
Confidence            344444444555778787655     77 89999999998888777766554443221   122233 344555666777


Q ss_pred             HHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccceehHHHHHHHHHHHHH
Q 016904           92 SSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTGIVA  171 (380)
Q Consensus        92 ~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~~~  171 (380)
                      .+.+.+.||...--+-.+++=.+..|++.++++.+++|||+++.||++++++.+||........+.+|..+.    =+++
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~----la~s  159 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA----LALS  159 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH----HHHH
Confidence            788899999999999999999999999999999999999999999999999999999888776777775544    4568


Q ss_pred             HHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 016904          172 EALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMM-EVSQIQFNFWIFFSNALCALALNFSIFLVIG  250 (380)
Q Consensus       172 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  250 (380)
                      |++|..+-|+. +     +++.+-.+...+.-.+..+......+.... ........+++++..|..+...-.+...+-+
T Consensus       160 f~~Ygl~RK~~-~-----v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~  233 (293)
T COG2962         160 FGLYGLLRKKL-K-----VDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAK  233 (293)
T ss_pred             HHHHHHHHHhc-C-----CchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            88888866654 3     466666666555444444433333333221 1212334455666677777766666777899


Q ss_pred             hcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhhhhh
Q 016904          251 RTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVR  308 (380)
Q Consensus       251 ~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~~~~  308 (380)
                      +.+=.+.+++.|.+|....+++++++ +|+++..+++..++|-+|+.++.+...++.+
T Consensus       234 ~lpls~~G~lqYi~Ptl~fllav~i~-~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r  290 (293)
T COG2962         234 RLPLSTLGFLQYIEPTLMFLLAVLIF-GEPFDSDQLVTFAFIWLALALFSIDGLYTAR  290 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999 8889999999999999999999986655433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.82  E-value=1.8e-21  Score=167.83  Aligned_cols=278  Identities=12%  Similarity=0.097  Sum_probs=203.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHH
Q 016904            9 LVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISA   88 (380)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (380)
                      +....+..+- ++.+..+.+..|...      ++ |......|+++-.++.++....++..--.+...|   +.+++-|+
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e------~~-p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R---~~LiLRg~  105 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLE------ND-PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR---KWLILRGF  105 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhc------cC-hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE---EEEEeehh
Confidence            3333333444 455555655555433      44 8888888877665555544332222110111222   23455567


Q ss_pred             HHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc-------------
Q 016904           89 FFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI-------------  155 (380)
Q Consensus        89 ~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~-------------  155 (380)
                      ....+..+.|+|++|.+.++|.++.+++|.++.++++.++||+.++.+.++..+.+.||++++.+..             
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~  185 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ  185 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc
Confidence            6667778899999999999999999999999999999999999999999999999999999987531             


Q ss_pred             -eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHH
Q 016904          156 -HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSN  234 (380)
Q Consensus       156 -~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (380)
                       +.+..|.+.++.+++..|-..++.|++-|+    .|....+.|..+++++..++......  .+..+.-.-++|+++.-
T Consensus       186 ~~~~~~gt~aai~s~lf~asvyIilR~iGk~----~h~~msvsyf~~i~lV~s~I~~~~ig--~~~lP~cgkdr~l~~~l  259 (346)
T KOG4510|consen  186 VEYDIPGTVAAISSVLFGASVYIILRYIGKN----AHAIMSVSYFSLITLVVSLIGCASIG--AVQLPHCGKDRWLFVNL  259 (346)
T ss_pred             ccccCCchHHHHHhHhhhhhHHHHHHHhhcc----ccEEEEehHHHHHHHHHHHHHHhhcc--ceecCccccceEEEEEe
Confidence             223568899999999999888888887555    46666677777777776665544433  22222223445666666


Q ss_pred             HHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          235 ALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       235 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      |+.+++.+.....++++--|...++..+...+++.++.+++| ++.++++.|.|+++++.+.++....|.
T Consensus       260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff-~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFF-GHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHh-cCCChHHHhhceeeeehhHHHHHHHHH
Confidence            888999999888888887777789999999999999999999 667999999999999998887665443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.81  E-value=2.4e-17  Score=152.25  Aligned_cols=264  Identities=13%  Similarity=0.113  Sum_probs=191.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHH
Q 016904           10 VLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF   89 (380)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (380)
                      +..++.+++|+....    ..|...     +++ +..+.  |..++.+++..+....+. +  +.+.++.+..-+..|+.
T Consensus         4 l~~lia~~~wGs~g~----~~k~~~-----g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~--~~~~~~~~~~g~l~G~~   68 (290)
T TIGR00776         4 LIALIPALFWGSFVL----INVKIG-----GGP-YSQTL--GTTFGALILSIAIAIFVL-P--EFWALSIFLVGLLSGAF   68 (290)
T ss_pred             HHHHHHHHHHhhhHH----HHhccC-----CCH-HHHHH--HHHHHHHHHHHHHHHHhC-C--cccccHHHHHHHHHHHH
Confidence            344555666766554    345432     455 43333  777777776665544332 1  12223334556666777


Q ss_pred             HHHHHHHHhhhhhcccHhHHHHHHH-HHHHHHHHHHHHhccccccHhH----HHHHHHHHhhhheeeeccce-------e
Q 016904           90 FASSLWFGNTAYLHISVAFIQMLKA-LMPVATFFMAVLCGTDKARLDV----FLNMVLVSVGVVISSYGEIH-------F  157 (380)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~il~~-~~pi~v~ll~~~~l~ek~~~~~----~~~v~l~~~Gv~l~~~~~~~-------~  157 (380)
                      ++.++.+++.+.++++++.+..+.+ +.++++.+++.+++|||.++++    ++|+++.++|++++...+.+       .
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~  148 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEF  148 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccccc
Confidence            8899999999999999999999998 8889999999999999999999    99999999999998764321       2


Q ss_pred             h-HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHH---HHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHH
Q 016904          158 N-IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSL---YYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFS  233 (380)
Q Consensus       158 ~-~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (380)
                      + ..|+++++.++++|++|.+..|+. +     ++|....   .+..+++.....++.. ...+ .    .....+..+.
T Consensus       149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-----~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-~----~~~~~~~~~~  216 (290)
T TIGR00776       149 NFKKGILLLLMSTIGYLVYVVVAKAF-G-----VDGLSVLLPQAIGMVIGGIIFNLGHI-LAKP-L----KKYAILLNIL  216 (290)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHc-C-----CCcceehhHHHHHHHHHHHHHHHHHh-cccc-h----HHHHHHHHHH
Confidence            3 689999999999999999999975 2     4666663   3333344433333321 0111 1    1223344444


Q ss_pred             HHHHHHHHHHHHHHHHh-hcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhh----HHHHHHHHHHHHHHH
Q 016904          234 NALCALALNFSIFLVIG-RTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNI----IGYAIALCGVVMYNY  301 (380)
Q Consensus       234 ~~~~~~~~~~~~~~~i~-~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~----~G~~lii~g~~~~~~  301 (380)
                      .|++....+.+++...+ +.++.+++++.+.+|+.+++++++++ +|+.++.|+    +|.++++.|+.+...
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l-~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILIL-GEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHh-ccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            67777777777878888 99999999999999999999999999 777999999    999999999987543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.80  E-value=2.3e-18  Score=155.74  Aligned_cols=226  Identities=17%  Similarity=0.206  Sum_probs=186.3

Q ss_pred             hhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc--
Q 016904           78 IYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI--  155 (380)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~--  155 (380)
                      +-.+..+..+.++...++++|.|+.|++++..+++.++.-+|+..++.++..||+++.|.+++.+.++|++++..++.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            334455556667788899999999999999999999999999999999999999999999999999999999987632  


Q ss_pred             ------eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccc--hhh
Q 016904          156 ------HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQI--QFN  227 (380)
Q Consensus       156 ------~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~--~~~  227 (380)
                            .....|.++++.+++.||.|.++.||...+++.++|-..+.++.+++..+++.|+..+.+....+....  ...
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q  316 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQ  316 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCce
Confidence                  234789999999999999999999998888767788888999999999999998877654332221111  111


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          228 FW-IFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       228 ~~-~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      +. +++.+.+..+..-++|.++.-.++|.++.+-..+....+++...++- +.++++.+++|...|++|.+..++..+
T Consensus       317 ~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k-~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  317 FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIK-GKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHhheecccc
Confidence            22 23334455666778899999999999999999999999999988887 777999999999999999999887543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.80  E-value=2.2e-18  Score=149.14  Aligned_cols=285  Identities=13%  Similarity=0.190  Sum_probs=223.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC-cHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHH
Q 016904            9 LVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFP-FPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPIS   87 (380)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (380)
                      +...+++.....+.....-.+..++++  ..+|. +-+.+++.|+++-..+.+..+... +.+++..+||.|    ..++
T Consensus        41 w~QFlic~~g~Ff~Yl~yGy~qElif~--~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rtY----~~la  113 (367)
T KOG1582|consen   41 WTQFLICSAGVFFLYLVYGYLQELIFN--VEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRTY----VILA  113 (367)
T ss_pred             hhhHHHHHhHHHHHHHHHHHHHHHHhc--cccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhHh----hhhH
Confidence            334555555555666666667888888  55565 679999999987544443333222 234556677665    5556


Q ss_pred             HHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc----ceehHHHHH
Q 016904           88 AFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE----IHFNIVGTL  163 (380)
Q Consensus        88 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~----~~~~~~G~~  163 (380)
                      ++..+.+.+.+-++.|++.+...+++++..+-+++.+.++.++|+....+.+..+...|+++....|    .+++..|+.
T Consensus       114 ~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~  193 (367)
T KOG1582|consen  114 FLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVM  193 (367)
T ss_pred             hhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHH
Confidence            7777888999999999999999999999999999999999999999999999999999999988866    457889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcccc---ccchh-hHHHHHHHHHHHH
Q 016904          164 YQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEV---SQIQF-NFWIFFSNALCAL  239 (380)
Q Consensus       164 l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~  239 (380)
                      ++-++.++.|+-..++++.++.++  -+..++++|...++.+.++.+..........+   ...++ .....++-++.++
T Consensus       194 mIsgALl~DA~iGNvQEk~m~~~~--~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gy  271 (367)
T KOG1582|consen  194 MISGALLADAVIGNVQEKAMKMNP--ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGY  271 (367)
T ss_pred             HHHHHHHHHHHhhHHHHHHHhhCC--CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhH
Confidence            999999999999999999998764  35688899999999888887766543321111   11112 2223344567777


Q ss_pred             HHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          240 ALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       240 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      +........++..+|.+++.++..+..+++++++++| ..+++....-|..+++.|+++-.+.+
T Consensus       272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllF-sKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLF-SKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHH-cCchHHHHhhhhHHHHHHHHhhcccC
Confidence            7777777789999999999999999999999999999 88899999999999999999877655

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.1e-15  Score=138.91  Aligned_cols=283  Identities=13%  Similarity=0.117  Sum_probs=205.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhh----ccCCCc------ccHHhhhHHh
Q 016904           14 LYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFK----VVSPVK------MTFEIYATCV   83 (380)
Q Consensus        14 ~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~----~~~~~~------~~~~~~~~~~   83 (380)
                      ..+++-.+.+.++.+..|+.-..++..|- |.+..++-=++-.+++......-.    ++..+.      ..+++ ..++
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~lk~   95 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRE-TLKV   95 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHH-HHHH
Confidence            34444456667778888998886655666 777776665555555554443221    111111      12334 3455


Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc---------
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE---------  154 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~---------  154 (380)
                      ...++.|+..+.+.+.++.+.+++++++...+....++++.+++++||++++||.++++.++|++++..+.         
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~  175 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSE  175 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCC
Confidence            55688999988899999999999999999999999999999999999999999999999999999887321         


Q ss_pred             --ceehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccc----cccchhhH
Q 016904          155 --IHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMME----VSQIQFNF  228 (380)
Q Consensus       155 --~~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~----~~~~~~~~  228 (380)
                        .+..+.|....++++++.++..++.++++|+..  .+.+........++.++.+...+..|+....    ..+|....
T Consensus       176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~--~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN--VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence              233579999999999999999999999998754  3444444444556665555555444443331    23455555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          229 WIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      |.+++.-..+.   .+.-..+|+.+-..-+....+..+++.+.++.+| |.++|....+|..+++.++.+|...++
T Consensus       254 w~vVl~~a~gG---Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf-~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  254 WLVVLLNAVGG---LLVSLVMKYADNILKGFSTSVAIILTTVASIALF-DFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHHHhccc---hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHc-cCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            65544322222   1233468999999999999999999999999999 888999999999999999999985443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.78  E-value=6.4e-17  Score=140.78  Aligned_cols=280  Identities=16%  Similarity=0.170  Sum_probs=208.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcCC--C-cCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCC-------------cccHHhhh
Q 016904           17 LIYILLSSGVILYNKWVLSPK--Y-FNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPV-------------KMTFEIYA   80 (380)
Q Consensus        17 ~~~~~~~~~~~~~~k~~l~~~--~-~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~-------------~~~~~~~~   80 (380)
                      ++....++..++..||.=+.+  + .+|..|+..+...|+=-+++++.+...+++.+.+             +.+.+.  
T Consensus         9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p--   86 (372)
T KOG3912|consen    9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP--   86 (372)
T ss_pred             hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc--
Confidence            344466777888889985433  2 3477798888877774445555544333222111             123332  


Q ss_pred             HHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc-----
Q 016904           81 TCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI-----  155 (380)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~-----  155 (380)
                      ..+++.+++...+..+.|.|+.+++++..++++....+|+.+++.-+++++++.++|+++....+|++++...|.     
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            456778999999999999999999999999999999999999999999999999999999999999998876531     


Q ss_pred             -----eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhc----CCccc------
Q 016904          156 -----HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLE----KPMME------  220 (380)
Q Consensus       156 -----~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~----~~~~~------  220 (380)
                           +.-..|+++.+.+-+.-|.++++.+|.+++.  +++|.....|..+++.+++...+..+.    +....      
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~  244 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV  244 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc
Confidence                 2336899999999999999999999998874  589999999999999666544333221    11111      


Q ss_pred             cccchhhH--------HHHHHHHHHH--HHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHH
Q 016904          221 VSQIQFNF--------WIFFSNALCA--LALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYA  290 (380)
Q Consensus       221 ~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~  290 (380)
                      ...|...+        ..+...+...  ...|+......|..++++-.++..++..+.++++..+. .|.+...|+.|.+
T Consensus       245 ~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~-~E~f~llqilGFl  323 (372)
T KOG3912|consen  245 LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG-WEYFHLLQILGFL  323 (372)
T ss_pred             hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH-HHHHHHHHHHHHH
Confidence            11111110        1112222221  22456666778999999999999999999999999999 6669999999999


Q ss_pred             HHHHHHHHHHH
Q 016904          291 IALCGVVMYNY  301 (380)
Q Consensus       291 lii~g~~~~~~  301 (380)
                      +.+.|+.+|+-
T Consensus       324 iLi~Gi~lY~~  334 (372)
T KOG3912|consen  324 ILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHH
Confidence            99999999984

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.74  E-value=6.1e-16  Score=138.52  Aligned_cols=211  Identities=13%  Similarity=0.122  Sum_probs=162.4

Q ss_pred             cHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc
Q 016904           75 TFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE  154 (380)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~  154 (380)
                      .+|+. .+....+++|...+.+.+.++++++++.++++.++..+++++++++++|+|++++||.++.+.++|++++..++
T Consensus        13 ~~~~~-~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   13 SPKDT-LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             hHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            35563 44555688999999999999999999999999999999999999999999999999999999999999976532


Q ss_pred             c-----------------eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 016904          155 I-----------------HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP  217 (380)
Q Consensus       155 ~-----------------~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~  217 (380)
                      .                 .....|+++.++++++.++..|+.+|++|+++  .+..........++.++.++.....+..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~  169 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGS  169 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            1                 11358999999999999999999999999864  3445555555666666666555444432


Q ss_pred             ccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHH
Q 016904          218 MME----VSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIA  292 (380)
Q Consensus       218 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~li  292 (380)
                      ...    ..++....|.++..   ........-..+|+.+...-+....+..+++.+.++++| +.+++....+|..++
T Consensus       170 ~~~~~g~f~G~~~~~~~~i~~---~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf-~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  170 AISESGFFHGYSWWVWIVIFL---QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLF-GFPPSLSFLLGAALV  244 (244)
T ss_pred             ccccCCchhhcchHHHHHHHH---HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-CCCCchHHhhheecC
Confidence            222    12333334443321   111223344579999999999999999999999999999 778999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=2.4e-18  Score=147.73  Aligned_cols=278  Identities=14%  Similarity=0.189  Sum_probs=205.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhh
Q 016904            6 NKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVP   85 (380)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (380)
                      .|+.+....+--+-..+..+..+.+.++..|   +.+-|...+|+-+..-+++--++..+ |+ +-.+..|    ++.++
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k---~iN~Pt~QtFl~Y~LLalVY~~~~~f-R~-~~~~~~~----~hYil   83 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARK---GINAPTSQTFLNYVLLALVYGPIMLF-RR-KYIKAKW----RHYIL   83 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhc---cCCCccHHHHHHHHHHHHHHhhHHHh-hh-HHHHHHH----HHhhh
Confidence            3444443333333334444455566666662   36668888888887666665555543 22 2333334    33466


Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc--------cee
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE--------IHF  157 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~--------~~~  157 (380)
                      .++...-++++-..|.||++....+.+.+-..+-+.+++|+++|.|.++.++.|+.++.+|+++++..|        ...
T Consensus        84 la~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsn  163 (336)
T KOG2766|consen   84 LAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSN  163 (336)
T ss_pred             eeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCC
Confidence            677777778888899999999999999999999999999999999999999999999999999988765        233


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHH
Q 016904          158 NIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALC  237 (380)
Q Consensus       158 ~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (380)
                      ...|++++++++-+||..++..+-+.|+    .+..+++...+++|+++..+- +..|........|.+.....+...++
T Consensus       164 p~~GD~lvi~GATlYaVSNv~EEflvkn----~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~  238 (336)
T KOG2766|consen  164 PVKGDFLVIAGATLYAVSNVSEEFLVKN----ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALT  238 (336)
T ss_pred             CccCcEEEEecceeeeeccccHHHHHhc----CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHH
Confidence            4689999999999999999999998777    689999999999999998877 44565555444554433333333444


Q ss_pred             HHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          238 ALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       238 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      -+..+-..-.++|..+++...+--.....+++++  -.| +.+++|...+..+.+..|..+|.
T Consensus       239 MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~F-gYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  239 MFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTF-GYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHH-hcchhhhhHHHHHHHHHhhEEee
Confidence            4444444445788889988888778888888888  566 55699999999999999999984

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.65  E-value=1.3e-15  Score=132.52  Aligned_cols=251  Identities=14%  Similarity=0.213  Sum_probs=190.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhc-ccHhHHHHHHHHHHHHHHHH
Q 016904           45 ITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLH-ISVAFIQMLKALMPVATFFM  123 (380)
Q Consensus        45 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~il~~~~pi~v~ll  123 (380)
                      ..+++.||++-+.--+++..-... .+++.+.|+|.+    ....+...+.+.|+++++ +|.+.-.++++..++.++.+
T Consensus        34 NLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i----~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAI----TVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeeccccc-cCCCCchhhhhe----ehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            578999998755544433321122 236778877643    334466677889999987 89999999999999999999


Q ss_pred             HHHhccccccHhHHHHHHHHHhhhheeeec---cce------------eh----HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016904          124 AVLCGTDKARLDVFLNMVLVSVGVVISSYG---EIH------------FN----IVGTLYQVTGIVAEALRLVLTQVLLQ  184 (380)
Q Consensus       124 ~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~---~~~------------~~----~~G~~l~l~s~~~~a~~~v~~~~~~~  184 (380)
                      +++++|+|++.+|+.++.+..+|+++....   |..            .+    ..|+.+...+.+..|.-.+++++..|
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~  188 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ  188 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999986652   111            01    27999999999999999999999999


Q ss_pred             hCCCCCCHHHHHHHHHHHHHHHHHHHHH--------hhcCCccc----cccchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016904          185 KKGLTLNPITSLYYIAPCSFVFLFVPWY--------LLEKPMME----VSQIQFNFWIFFSNALCALALNFSIFLVIGRT  252 (380)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~--------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (380)
                      +++  -++-+.++|.........+...-        ....+...    ....+..++.++.+.+..+.+.-..+.+..++
T Consensus       189 kyG--Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~  266 (330)
T KOG1583|consen  189 KYG--KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTET  266 (330)
T ss_pred             Hhc--CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhcee
Confidence            865  47899999998877544332210        00000000    01123445667777888887766677788899


Q ss_pred             chhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          253 GAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       253 ~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      ++.+++++-.+++.+..+++.+.| |.++++..|+|..+++.|.++|.-..
T Consensus       267 ~sLTVTlvltlRKFvSLl~SiiyF-~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  267 SSLTVTLVLTLRKFVSLLFSIIYF-ENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             cceEEEEeeeHHHHHHHhheeeEe-cCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 88899999999999999999987543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.64  E-value=7e-15  Score=123.03  Aligned_cols=140  Identities=36%  Similarity=0.557  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccc-----c-----chhh
Q 016904          161 GTLYQVTGIVAEALRLVLTQVLLQKK---GLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVS-----Q-----IQFN  227 (380)
Q Consensus       161 G~~l~l~s~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~-----~-----~~~~  227 (380)
                      |.+++++|.++.|+++++.|+.++++   +.+.++.+++.|.++.+.+.++|.....|++.....     .     ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78899999999999999999998873   356899999999999999999999988887653211     1     2234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          228 FWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      +..++.++++++..++..++++++++|.+.++.+.++.+..++.|+++| +|++++.+++|.++.++|.++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f-~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFF-GEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhc-CCcCCHHHHHHHHHHHHHHheeeC
Confidence            5567788999999999999999999999999999999999999999999 566999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.41  E-value=8.9e-13  Score=109.43  Aligned_cols=226  Identities=17%  Similarity=0.188  Sum_probs=166.2

Q ss_pred             ccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904           74 MTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      ...|.++++..|.++++.+.++.+..+++.++++.++.+.++.-.|+.+++++++|+|+...++++++++..|++++.+.
T Consensus        47 ~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   47 FNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             ceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            34445567778888899999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             c--ceehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHH-HHHHHh--hcCCccccccchhhH
Q 016904          154 E--IHFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFL-FVPWYL--LEKPMMEVSQIQFNF  228 (380)
Q Consensus       154 ~--~~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~~--~~~~~~~~~~~~~~~  228 (380)
                      |  +...+.|+..+++|+...|+|-|..|+...+.... +....+.....+..++. +|+...  .....+  .......
T Consensus       127 DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G-daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~--qsFA~~P  203 (290)
T KOG4314|consen  127 DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG-DAAHFMSCLGFFNLCFISFPALILAFTGVEHL--QSFAAAP  203 (290)
T ss_pred             cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch-hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHH--HHHhhCC
Confidence            5  45679999999999999999999999987764322 22222222233332222 222211  111111  1111122


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          229 WI-FFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       229 ~~-~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      |. +...+.+....++.....+..+.|...|+-..+..........++- |-+++...++|..+|+.|..+.....
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q-~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQ-ELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHH-HHHHHHHHHHHHHHHHHhHHheeccc
Confidence            32 2223344445566666678889998888877777777777777776 76799999999999999998866544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.39  E-value=2.1e-12  Score=103.83  Aligned_cols=120  Identities=17%  Similarity=0.265  Sum_probs=97.7

Q ss_pred             HHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHH-HHHHHHHHhhhhhc
Q 016904           25 GVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAF-FASSLWFGNTAYLH  103 (380)
Q Consensus        25 ~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~  103 (380)
                      .....+|...+    +++ |...+++|+.++.+ +..+....++.+..+.+++++ ...+..+.+ ....+.++++++++
T Consensus         5 ~~~~~~k~~~~----~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    5 IYSVFSKKLLK----KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQW-LWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             eHHHHHHHHhc----cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhh-hhhhHhhccceehHHHHHHHHHHh
Confidence            34567899999    788 99999999999987 555554444433355566664 444444554 68899999999999


Q ss_pred             ccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheee
Q 016904          104 ISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus       104 ~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      ++++.++++.++.|+++.+++++++||++++++++|++++++|++++.
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.30  E-value=3.7e-11  Score=92.97  Aligned_cols=126  Identities=13%  Similarity=0.081  Sum_probs=106.5

Q ss_pred             HHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCC-cccHHhhhHHhhhHHHHHHHHHHHHhh
Q 016904           21 LLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPV-KMTFEIYATCVVPISAFFASSLWFGNT   99 (380)
Q Consensus        21 ~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (380)
                      +++..-.++.|..++    +.+ |.+-++.|..+..+++..+....++.+.. ..+.|. +..+...|+..+.+..+++.
T Consensus        13 ~fa~L~~iF~KIGl~----~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~-~lflilSGla~glswl~Yf~   86 (140)
T COG2510          13 LFAGLTPIFAKIGLE----GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKS-WLFLILSGLAGGLSWLLYFR   86 (140)
T ss_pred             HHHHHHHHHHHHhcc----ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcce-ehhhhHHHHHHHHHHHHHHH
Confidence            334444668899999    888 99999999999988888877666654433 245555 56677778888889999999


Q ss_pred             hhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904          100 AYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus       100 al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      |++--.++...-+..+.|+++.+++++++|||++..+|+|++++.+|++++..
T Consensus        87 ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          87 ALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999988763

>TIGR00803 nst UDP-galactose transporter

Probab=99.18  E-value=2.5e-10  Score=101.53  Aligned_cols=190  Identities=14%  Similarity=0.146  Sum_probs=127.3

Q ss_pred             ccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec--------------------cc-------e
Q 016904          104 ISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG--------------------EI-------H  156 (380)
Q Consensus       104 ~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~--------------------~~-------~  156 (380)
                      ++++.....++..++++++..+.+.+||++..++++..+...|++.....                    +.       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            45667788888999999999999989998899999988888887742221                    10       2


Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccc----cccchhhHHHHH
Q 016904          157 FNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMME----VSQIQFNFWIFF  232 (380)
Q Consensus       157 ~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~----~~~~~~~~~~~~  232 (380)
                      ..+.|....+.++++.++..+++++..|+++  ...........+++.+.........+.....    ...++...|.++
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD--TMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG  159 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC--CchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence            3467888888888999999999999866532  1111111222222222111111111111110    112223334333


Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHH
Q 016904          233 SNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMY  299 (380)
Q Consensus       233 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~  299 (380)
                      +   .....+.+..+.+++.++.+.++...++++++.++++++| +++++..+++|..+++.|+.+|
T Consensus       160 ~---~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f-~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       160 L---LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLF-DAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             H---HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHHHHHHHHHeeeEeC
Confidence            2   2333344567789999999999999999999999999999 7789999999999999987764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.17  E-value=2.6e-10  Score=91.48  Aligned_cols=125  Identities=17%  Similarity=0.258  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016904          170 VAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVI  249 (380)
Q Consensus       170 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  249 (380)
                      ++||.+.++.|+..++    .|+.....+....+.+ +++.....+.............+.+..+.+.....+.+++.++
T Consensus         1 ~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK----ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhcc----CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            4688899999998776    6999999999999887 5555554443322112222223344444444566777788999


Q ss_pred             hhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          250 GRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       250 ~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      ++.++...+.+.+++|+++.+++++++ +|++++.+++|+++++.|+++..
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~-~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFL-GERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999 77799999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.17  E-value=1.6e-10  Score=91.30  Aligned_cols=106  Identities=11%  Similarity=0.161  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCC--cccHHhhhHHhhhHHHHH-HHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHH
Q 016904           49 MIHMGFSGVVAFFLVRVFKVVSPV--KMTFEIYATCVVPISAFF-ASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAV  125 (380)
Q Consensus        49 ~~r~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~  125 (380)
                      .+|+.++.+++..+....++.+..  ....++ +...+..++.. ...+.++++|+++.| +.+..+.++.|++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKP-WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            478888888877776553332211  112233 23344445554 478899999999999 5888999999999999999


Q ss_pred             HhccccccHhHHHHHHHHHhhhheeeeccce
Q 016904          126 LCGTDKARLDVFLNMVLVSVGVVISSYGEIH  156 (380)
Q Consensus       126 ~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~~  156 (380)
                      +++|||++++++.+++++++|++++.+++.+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999887643

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.13  E-value=4.1e-10  Score=87.25  Aligned_cols=135  Identities=10%  Similarity=0.126  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHH
Q 016904          161 GTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA  240 (380)
Q Consensus       161 G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (380)
                      -.++++.+++++++..++.|--+++    .||...+..-.....+++..........+....-.+..+..++++|+.+..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~----vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG----VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc----cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHH
Confidence            3688999999999999999887665    577777777777666666666554433222211122334446778888888


Q ss_pred             HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       241 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      ...++|++++.-.+..+..+.-+.++++++++++++ +|+++..+++|+.+|.+|.++..
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL-~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFL-GERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhCeeeEe
Confidence            888999999999999999999999999999999999 66799999999999999987643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.02  E-value=1.1e-07  Score=85.12  Aligned_cols=209  Identities=18%  Similarity=0.182  Sum_probs=153.0

Q ss_pred             HhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhH----HHHHHHHHhhhheee
Q 016904           77 EIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDV----FLNMVLVSVGVVISS  151 (380)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~----~~~v~l~~~Gv~l~~  151 (380)
                      +. +...+..|++++.++..++.+++++.++.+.=+. ....+.+.++++++++|--+..+    .+++++.++|+.+..
T Consensus        43 ~~-~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   43 TS-FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            44 5677788999999999999999999988766554 56778899999999999777665    447888999999888


Q ss_pred             eccce--------ehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 016904          152 YGEIH--------FNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQ  223 (380)
Q Consensus       152 ~~~~~--------~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~  223 (380)
                      ..|.+        ....|++..+++.+.|..|.+..|-.      +.++.....=+.+--.+..+......+....    
T Consensus       122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~----  191 (269)
T PF06800_consen  122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIGMLIGAFIFNLFSKKPFF----  191 (269)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHHHHHHHHHHhhccccccc----
Confidence            75432        12469999999999999999987653      2567766664433222222222222111111    


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcch----hhhHHHHHHHHHHHH
Q 016904          224 IQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITG----LNIIGYAIALCGVVM  298 (380)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~----~~~~G~~lii~g~~~  298 (380)
                       ....|.-+.+|++-...+.+++...++.+..+.=.+..+..+++.+.|.+++||. =+.    ..++|.+++++|..+
T Consensus       192 -~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~-Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  192 -EKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK-KTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             -ccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec-CchhhHHHHHHHHHHHHHhhhc
Confidence             1223444666777777888888899999999999999999999999999999554 454    466788888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.95  E-value=4.5e-08  Score=89.12  Aligned_cols=130  Identities=9%  Similarity=0.016  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCc-HHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHH-H
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPF-PITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISA-F   89 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   89 (380)
                      ...+.++..++........|...+    +.+. +..+..+|+.++.+++.++....++  ....+.+++ ...+..++ .
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~  201 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVK----KEGPELLQFTGWVLLLGALLLLPFAWFLGP--NPQALSLQW-GALLYLGLIG  201 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhh----cCCchHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcchHHH-HHHHHHHHHH
Confidence            333444444445555667788776    3431 4456667899888888777654332  222344443 33343444 4


Q ss_pred             HHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhh
Q 016904           90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVV  148 (380)
Q Consensus        90 ~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~  148 (380)
                      ......++++++++++++.++++.++.|++++++++++++|+++..++.|..+.+.|+.
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            56788999999999999999999999999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.83  E-value=1.5e-07  Score=87.45  Aligned_cols=138  Identities=10%  Similarity=0.120  Sum_probs=106.4

Q ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccc---cccchhhHHHHH
Q 016904          156 HFNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMME---VSQIQFNFWIFF  232 (380)
Q Consensus       156 ~~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~  232 (380)
                      +....|.+++++++++|+...+..|.. .+    ++|.++.++...++.+++++...........   ...+ ......+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~----~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~   77 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY----VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTP-QKIFMLA   77 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC----CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCH-HHHHHHH
Confidence            345689999999999999999999754 32    7899999999999988776665433211110   0011 1222233


Q ss_pred             HHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          233 SNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       233 ~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      .+++.....+.+++++++++++..+++..++.|+++.+++++++ +|+++..+++|.++.++|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l-~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL-GERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHH
Confidence            45555556677889999999999999999999999999999999 67799999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.82  E-value=1.3e-07  Score=87.19  Aligned_cols=132  Identities=10%  Similarity=0.043  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhc-CCccccccchhhHHHHHHHHHHHHH
Q 016904          162 TLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLE-KPMMEVSQIQFNFWIFFSNALCALA  240 (380)
Q Consensus       162 ~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  240 (380)
                      +++.+.+++++|.+.++.|+..+++    ++.  ..+....+++.+.|...... ...+... ....+..++.+++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~----~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE----PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRL-PATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch----hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCc-chhhHHHHHHHHHHHHH
Confidence            5788999999999999999876652    332  35555566666666654321 1111111 11223344556666667


Q ss_pred             HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       241 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      .+.+.+.++++.++...+.+.+..|+++.+++++++ +|+++..+++|.++++.|+.+...
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~-~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTL-GETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHhc
Confidence            777788899999999999999999999999999999 677999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=98.81  E-value=1.9e-07  Score=84.87  Aligned_cols=135  Identities=14%  Similarity=0.153  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCc-----cccccchhhHHHHHHH
Q 016904          160 VGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPM-----MEVSQIQFNFWIFFSN  234 (380)
Q Consensus       160 ~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  234 (380)
                      .|.+++++++++|+...+..|.. .+    ++|.++.++-.+++.+++++.........     ............+...
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~----~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP----LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc----CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence            38899999999999999999873 32    79999999999999887766553322110     1001111223344556


Q ss_pred             HHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          235 ALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       235 ~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      +++....+.+++++++++++..+++..++.|+++.+++++++ +|+++..+++|.++.++|+.+..
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l-~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFL-KERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Confidence            666666777888999999999999999999999999999999 67799999999999999998654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.66  E-value=1.2e-06  Score=83.31  Aligned_cols=136  Identities=10%  Similarity=0.074  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCc-cccccchhhHHHHHHHHHHHH
Q 016904          161 GTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPM-MEVSQIQFNFWIFFSNALCAL  239 (380)
Q Consensus       161 G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  239 (380)
                      -.+.++..-++|+.+.++.|..++..   +++....++-..+++++++|.....+... .....+.. +..+.+.++++.
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~~G---~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~-~~~l~l~g~~g~   89 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATSKG---LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI-LSKIGLLGFLGS   89 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCC---CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH-HHHHHHHHHHHH
Confidence            35677888899999999999998753   78899999999999988888876544321 11112222 222333455554


Q ss_pred             HHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHh------cCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          240 ALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVI------FPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       240 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~------~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ..+.+.+.++++++|..++++.++.|+++.++++++      + +|+++..+++|.++.++|+.+...
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~-~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSF-KERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhh-cccccHHHHHHHHHHHHHHHHHHH
Confidence            555668889999999999999999999999999999      6 677999999999999999987654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.59  E-value=1.8e-06  Score=80.11  Aligned_cols=109  Identities=12%  Similarity=0.044  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHH-HHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHH
Q 016904           44 PITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISA-FFASSLWFGNTAYLHISVAFIQMLKALMPVATFF  122 (380)
Q Consensus        44 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~l  122 (380)
                      +...+.+++.++.+++.++............+.+.+ ..++..++ .......++++++++.+++.++++.++.|++.++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGF-LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            556778898888887776654322111111234443 33333444 4556788999999999999999999999999999


Q ss_pred             HHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904          123 MAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus       123 l~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      +++++++|+++..+++|..+.+.|+.+....
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999876543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.59  E-value=2.7e-06  Score=79.00  Aligned_cols=131  Identities=11%  Similarity=-0.005  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHH-HH
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISA-FF   90 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   90 (380)
                      ..++.++..++.....+..|...+    +.+ |.... +..+++.+++.++.....  .....++.. +...+..++ ..
T Consensus       149 G~ll~l~aa~~~a~~~v~~r~~~~----~~~-~~~~~-~~~~~~~~~l~~~~~~~~--~~~~~~~~~-~~~~l~lgv~~t  219 (293)
T PRK10532        149 GAALALGAGACWAIYILSGQRAGA----EHG-PATVA-IGSLIAALIFVPIGALQA--GEALWHWSI-LPLGLAVAILST  219 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc----cCC-chHHH-HHHHHHHHHHHHHHHHcc--CcccCCHHH-HHHHHHHHHHHH
Confidence            334444445555556667777766    555 66664 445556666655544221  111223333 222233444 34


Q ss_pred             HHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheee
Q 016904           91 ASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus        91 ~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      .+.+.++++++++++++.++++.++.|++..++++++++|+++..+++|..+.++|+....
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            5677899999999999999999999999999999999999999999999999999987654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.55  E-value=2.1e-06  Score=67.31  Aligned_cols=64  Identities=14%  Similarity=0.074  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheee
Q 016904           88 AFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus        88 ~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      ++++...++...+++.+|.+.+..+.++.++++.+++++++|||+++++++|+.++++|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5577788999999999999999999999999999999999999999999999999999998764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.47  E-value=0.00023  Score=66.61  Aligned_cols=222  Identities=9%  Similarity=-0.035  Sum_probs=141.4

Q ss_pred             cHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccc-------cHhHHHHHHHHHhh
Q 016904           75 TFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKA-------RLDVFLNMVLVSVG  146 (380)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~-------~~~~~~~v~l~~~G  146 (380)
                      +.+. +...+..|++.+.++..+..+++|+.++.+.-+. .+.-+...++..++++|-.       ...-.+++++.++|
T Consensus        69 ~~~~-~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         69 SGST-LLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             CHHH-HHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            3444 4666778899999999999999999999876554 5788889999999988643       23458889999999


Q ss_pred             hheeee----ccc---------eehHHHHHHHHHHHHHHHHHH-------HHHHHHhhhCCCCCCHHHHHHHHHH---HH
Q 016904          147 VVISSY----GEI---------HFNIVGTLYQVTGIVAEALRL-------VLTQVLLQKKGLTLNPITSLYYIAP---CS  203 (380)
Q Consensus       147 v~l~~~----~~~---------~~~~~G~~l~l~s~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~  203 (380)
                      +++...    .|.         .....|+++++++.+.++.|.       ...+....   ...++.....-+..   .+
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~---~g~~~~~~~lp~~~~~~~G  224 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA---LGVDPLYAALPSYVVIMGG  224 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh---cCCCchHHHHHHHHHHHHH
Confidence            998776    332         123589999999999999998       43333211   12343333222222   33


Q ss_pred             HHHHHHHHHh---hcCCcc----ccccc----hhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH----HhhhhhhHHH
Q 016904          204 FVFLFVPWYL---LEKPMM----EVSQI----QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIR----VAGVLKDWIL  268 (380)
Q Consensus       204 ~i~l~~~~~~---~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s----~~~~l~~v~~  268 (380)
                      ..+.-...-.   ......    +....    .......+++|++-+..+..+...-++.+.....    +...+.-+++
T Consensus       225 ~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viis  304 (345)
T PRK13499        225 GAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCG  304 (345)
T ss_pred             HHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHH
Confidence            3322211111   011111    11111    1223344667777777777777777776444332    3346777999


Q ss_pred             HHHHHHhcCCCCcc------hhhhHHHHHHHHHHHHHHHh
Q 016904          269 IALSTVIFPESTIT------GLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       269 ~~~~~l~~~~~~~~------~~~~~G~~lii~g~~~~~~~  302 (380)
                      .++|.+ + +|.=+      ...++|.+++++|..+..+.
T Consensus       305 tlwGi~-l-kE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        305 NLWGLV-L-KEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHhhhh-h-hhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            999995 7 44344      57799999999999886553

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.45  E-value=1.7e-05  Score=65.93  Aligned_cols=136  Identities=13%  Similarity=0.033  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC---CcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCc---------cc-HHhhhH
Q 016904           15 YLLIYILLSSGVILYNKWVLSPK---YFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVK---------MT-FEIYAT   81 (380)
Q Consensus        15 ~~~~~~~~~~~~~~~~k~~l~~~---~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~---------~~-~~~~~~   81 (380)
                      +++...++........|..++++   ..+.+ |+.+..+....+.+++.+.....+..+..+         .. ..+.+.
T Consensus         4 ~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T PF03151_consen    4 LALASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIF   82 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHH
Confidence            34444555555666778887742   35666 999999999989888888766544432111         00 223345


Q ss_pred             HhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheee
Q 016904           82 CVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      .++..+++....+...++.++++++-+.+++.....+.+.++++++++|+++..++.|+.++++|+.+-.
T Consensus        83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            5666677777888999999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.43  E-value=9.6e-06  Score=75.37  Aligned_cols=129  Identities=11%  Similarity=0.071  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHH
Q 016904           14 LYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASS   93 (380)
Q Consensus        14 ~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (380)
                      +++++..+++....+++|...+    +.+ |....   +..+.+.+.+...... ......++..+ ..++..++...+.
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~----~~~-~~~~~---~~~~~~~l~~~~~~~~-~~~~~~~~~~~-~~l~~~~~~t~~~  228 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYAR----GKN-GITLF---FILTALALWIKYFLSP-QPAMVFSLPAI-IKLLLAAAAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccC----CCC-chhHH---HHHHHHHHHHHHHHhc-CccccCCHHHH-HHHHHHHHHHHHH
Confidence            3444444555555566777655    444 55432   2223333333222211 11223444443 3344455556668


Q ss_pred             HHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           94 LWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        94 ~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      +.++++++++++++.++.+.+..|++..++++++++|+++..+++|.+++++|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            89999999999999999999999999999999999999999999999999999877644

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.39  E-value=5.3e-06  Score=76.77  Aligned_cols=66  Identities=15%  Similarity=0.080  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      -+.+..+..+...|+.+.|.+..+=+.+...++.++++.+++|||++++.+.|..++++|.+++..
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            345667778899999999999999999999999999999999999999999999999999987654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.37  E-value=4.4e-06  Score=77.92  Aligned_cols=138  Identities=12%  Similarity=-0.007  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHH---------hhhHH
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFE---------IYATC   82 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~   82 (380)
                      ..+++++..+++.......|...+  ..+++ |..++.++..++.+++.++.............+.         ..+..
T Consensus       146 G~~~~l~a~~~~a~~~v~~k~~~~--~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       146 GFLSAMISNITFVSRNIFSKKAMT--IKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc--cCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            334455555555555666676655  23466 8899999999998888877653321111010010         00111


Q ss_pred             hhhHHH-HHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           83 VVPISA-FFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        83 ~~~~~~-~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      .+..++ ++...+.+++.+++++++..+++.....|++++++++++++|+++..+++|..++++|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            112222 3333345667899999999999999999999999999999999999999999999999987643

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.34  E-value=2.9e-05  Score=72.33  Aligned_cols=139  Identities=15%  Similarity=0.092  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccC-----CCcccHHhhhHHhhhH
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS-----PVKMTFEIYATCVVPI   86 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   86 (380)
                      ...++++-.+++....+..|...+  ...-+....+..+..+++.+.+...........     ....+...+.......
T Consensus       144 G~~l~l~aal~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        144 GFMLTLAAAFSWACGNIFNKKIMS--HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc--ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            333444444455555556676554  111111344455556555444333322221111     0123444433333333


Q ss_pred             HHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      .+...+...++++++++.+++.++.+..+.|++..++++++++|+++..+++|..++++|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            334456788999999999999999999999999999999999999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.25  E-value=6.7e-05  Score=71.39  Aligned_cols=138  Identities=15%  Similarity=0.191  Sum_probs=97.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCC-HHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHH
Q 016904          158 NIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLN-PITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNAL  236 (380)
Q Consensus       158 ~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (380)
                      ++.-.++.++--.+...++++.|..++.    .+ |..+..++.+++.++..+.....-........+...+..++..|+
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl  122 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGL  122 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHH
Confidence            3334445555555556678888888876    46 999999999988766544432211110101112223334455566


Q ss_pred             HHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          237 CALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       237 ~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      ++...+...+.+++.+++..++++..+.|+++++++++++ +|+++..+++|.+++++|+.+..
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l-~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFL-KQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHh-CCCccHHHHHHHHHHHHHHHhee
Confidence            6665566667889999999999999999999999999999 77799999999999999998754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.22  E-value=7.5e-05  Score=60.02  Aligned_cols=119  Identities=10%  Similarity=0.018  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHH
Q 016904          160 VGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCAL  239 (380)
Q Consensus       160 ~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (380)
                      .|.++.+.+.++.+...++.|+-+++.+. .+..   .. .. ..    ... ..+        +....++   +.++..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~---~~-~~-~~----~~~-~~~--------p~~~i~l---gl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHA---WD-FI-AA----LLA-FGL--------ALRAVLL---GLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccch---hH-HH-HH----HHH-Hhc--------cHHHHHH---HHHHHH
Confidence            47889999999999999999987766432 1111   00 00 00    000 000        0011222   223333


Q ss_pred             HHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHH--hcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          240 ALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTV--IFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       240 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l--~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ..++++..++++.+...+..+....++...+.++.  +| +|++++.+++|.++|++|+++.+.
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~-~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWF-NETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHhcc
Confidence            34456788999999999998888888778777775  78 777999999999999999999764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.00  E-value=3.8e-05  Score=61.72  Aligned_cols=72  Identities=18%  Similarity=0.086  Sum_probs=63.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHH--hccccccHhHHHHHHHHHhhhheeeecc
Q 016904           83 VVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVL--CGTDKARLDVFLNMVLVSVGVVISSYGE  154 (380)
Q Consensus        83 ~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~--~l~ek~~~~~~~~v~l~~~Gv~l~~~~~  154 (380)
                      +....+++.+...+++.+++..|++.+.-+.+..++++.+.++.  ++||++++.+++|+.++++|+.++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34555678889999999999999999999999999999888885  8999999999999999999999887543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.95  E-value=0.00019  Score=56.44  Aligned_cols=67  Identities=15%  Similarity=0.221  Sum_probs=56.3

Q ss_pred             HHHHH-HHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          235 ALCAL-ALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       235 ~~~~~-~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      +.+.. ..+..+++++++.++ .++....+.|+++.+++++++ +|+++..+++|..++++|+.+..+..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~-~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF-KERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            44433 556667788999995 777999999999999999999 66799999999999999999987643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.87  E-value=0.00054  Score=61.51  Aligned_cols=139  Identities=14%  Similarity=0.157  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCcccc--ccchhhHHHHHHHH
Q 016904          158 NIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEV--SQIQFNFWIFFSNA  235 (380)
Q Consensus       158 ~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  235 (380)
                      ...|+++++.+.+.|++...+.|-+ +.    .++.++..+-.+.+.++++...........-.  ...+..+..+.+++
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~----~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP----LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc----CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            3469999999999999988888766 33    68899999998888877766655432221111  11112233344444


Q ss_pred             HHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          236 LCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       236 ~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      ..-..-...+.|++.+-....+|.=.+++|.+.+++|.+++ +|+++..|++..++..+|+..-.+.
T Consensus        80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lfl-kErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFL-KERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHH
Confidence            44444444567789998999999999999999999999999 6679999999999999999865543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.84  E-value=0.00092  Score=52.32  Aligned_cols=59  Identities=12%  Similarity=0.079  Sum_probs=51.8

Q ss_pred             HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          241 LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       241 ~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      ..+++..++++.+...+...-.+.++.+.++|+++| +|++++.+++|.+++++|+.+..
T Consensus        50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f-~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLW-HEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHh
Confidence            344566789999999998888899999999999999 77799999999999999998753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.79  E-value=0.00046  Score=63.93  Aligned_cols=126  Identities=10%  Similarity=0.009  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHH----HHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHH
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMG----FSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPIS   87 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (380)
                      ..+..++..+.........|..      +++ |...++.++.    .+.++..++    + +.++ ...+. .+..+..|
T Consensus       153 Gi~~~l~sg~~y~~~~~~~~~~------~~~-~~~~~~~~~~g~~~~~~~~~~~~----~-~~~~-~~~~~-~~~~~~~G  218 (290)
T TIGR00776       153 GILLLLMSTIGYLVYVVVAKAF------GVD-GLSVLLPQAIGMVIGGIIFNLGH----I-LAKP-LKKYA-ILLNILPG  218 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc------CCC-cceehhHHHHHHHHHHHHHHHHH----h-cccc-hHHHH-HHHHHHHH
Confidence            3334444444444455566643      244 7767555554    333333222    1 1111 12333 23344477


Q ss_pred             HHHHHHHHHHhhhhh-cccHhHHHHHHHHHHHHHHHHHHHhccccccHhHH----HHHHHHHhhhheee
Q 016904           88 AFFASSLWFGNTAYL-HISVAFIQMLKALMPVATFFMAVLCGTDKARLDVF----LNMVLVSVGVVISS  151 (380)
Q Consensus        88 ~~~~~~~~~~~~al~-~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~----~~v~l~~~Gv~l~~  151 (380)
                      ++....+.++..+.+ +.+++.+.++.+..|+...+++++++||+.+++++    +|.++.+.|+.+..
T Consensus       219 i~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       219 LMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            778888899999999 99999999999999999999999999999999999    99999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.77  E-value=0.00015  Score=57.24  Aligned_cols=70  Identities=16%  Similarity=0.148  Sum_probs=62.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      +...++++.+.++...+++++|.+.+..+- ....+.+.++++++++|+++..+++++.+.++|++++...
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            455667888899999999999999988885 6899999999999999999999999999999999887543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.74  E-value=9.8e-06  Score=70.42  Aligned_cols=218  Identities=15%  Similarity=0.129  Sum_probs=152.3

Q ss_pred             CCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhH----HHHHHHHHh
Q 016904           71 PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDV----FLNMVLVSV  145 (380)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~----~~~v~l~~~  145 (380)
                      .+..+++. +..-+..|++...++..++.|++++.++.+.=+. .+.-+-+.+++++.++|-.+..+    .+++++.++
T Consensus        51 ~p~~T~~~-~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAlilivi  129 (288)
T COG4975          51 SPELTLTI-FIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVI  129 (288)
T ss_pred             cCccchhh-HHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHH
Confidence            34445555 5667788999999999999999999988876554 45677888999999999887766    467888899


Q ss_pred             hhheeeeccce--------ehHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 016904          146 GVVISSYGEIH--------FNIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP  217 (380)
Q Consensus       146 Gv~l~~~~~~~--------~~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~  217 (380)
                      |+.+-++.|.+        .--.|+...+.|.+.|-.|.++.+...      .+.+....-+..-..+.-+......+..
T Consensus       130 G~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~------v~g~saiLPqAiGMv~~ali~~~~~~~~  203 (288)
T COG4975         130 GIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD------VDGLSAILPQAIGMVIGALILGFFKMEK  203 (288)
T ss_pred             hheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc------ccchhhhhHHHHHHHHHHHHHhhccccc
Confidence            99998886531        123688999999999999998887651      3444444433322211112222211111


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchh----hhHHHHHHH
Q 016904          218 MMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGL----NIIGYAIAL  293 (380)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~----~~~G~~lii  293 (380)
                           ...-..|.-+..|+.-...|...+.+-++.+-.+.=.+..+.-+++++-|.+++ +|+-|..    -++|.++++
T Consensus       204 -----~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L-~ekKtkkEm~~v~iGiiliv  277 (288)
T COG4975         204 -----RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFL-GEKKTKKEMVYVIIGIILIV  277 (288)
T ss_pred             -----chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEE-eccCchhhhhhhhhhHHHHH
Confidence                 122334555666777777888887788888777766777788899999999999 5556654    467888888


Q ss_pred             HHHHHHHH
Q 016904          294 CGVVMYNY  301 (380)
Q Consensus       294 ~g~~~~~~  301 (380)
                      +|..+...
T Consensus       278 vgai~lg~  285 (288)
T COG4975         278 VGAILLGI  285 (288)
T ss_pred             HHhhhhhe
Confidence            88776543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.73  E-value=0.0009  Score=62.41  Aligned_cols=128  Identities=10%  Similarity=0.050  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016904          173 ALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRT  252 (380)
Q Consensus       173 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (380)
                      ..+.++++++.++....-.+..+++.+....++...+............    ..+.-....+++.+....+.+.+++++
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRK----IPLKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCc----ChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3455788888776543324677777777777666555444332111111    112222333566666667788899999


Q ss_pred             chhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhhh
Q 016904          253 GAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVK  305 (380)
Q Consensus       253 ~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~~  305 (380)
                      +..+..+....+++++.+++.+++ +++.+..++++..++.+|+.+....+.+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~-~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLIL-GKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhc-CccccHHHHHHHHHHHhhHheeeecccc
Confidence            999999999999999999999999 7779999999999999999998776543

; GO: 0055085 transmembrane transport

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.68  E-value=0.0031  Score=57.86  Aligned_cols=138  Identities=14%  Similarity=0.094  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHH
Q 016904          159 IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCA  238 (380)
Q Consensus       159 ~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (380)
                      ..+....+..++.|+......+.....   ..+...........+.+...+.... +. ...........+..+.+++..
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~   80 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLLLL-EP-RGLRPALRPWLLLLLLALLGL   80 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHHHh-hc-ccccccccchHHHHHHHHHHH
Confidence            457777888888999888888876554   1344555554555555442222221 11 001111111234455555666


Q ss_pred             HHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHH-HhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          239 LALNFSIFLVIGRTGAVTIRVAGVLKDWILIALST-VIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       239 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~-l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      ...+.+++.+++++++..+....+..|+++.++++ +++ +|+++..+++|..+.+.|+.+....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~Gv~lv~~~  144 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL-GERLSLLQILGILLALAGVLLILLG  144 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHc-cCCCcHHHHHHHHHHHHhHHheecC
Confidence            66667788889999999999999999999999997 776 6679999999999999999987653

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.62  E-value=0.0017  Score=57.05  Aligned_cols=131  Identities=9%  Similarity=-0.017  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHH
Q 016904           11 LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFF   90 (380)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (380)
                      ..+++.+..+.+|..+++..|.+-.    .-+ --.=+..-++++.++.+++.....  ...-.++.. ...-+..+++.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~----~~~-g~~g~a~gm~vAaviv~Pig~~~a--g~~l~~p~l-l~laLgvavlS  219 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGR----AEH-GTAGVAVGMLVAALIVLPIGAAQA--GPALFSPSL-LPLALGVAVLS  219 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcc----cCC-CchHHHHHHHHHHHHHhhhhhhhc--chhhcChHH-HHHHHHHHHHh
Confidence            4555666777777777777776664    222 222344556667777777654211  111222222 22222333332


Q ss_pred             -HHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhe
Q 016904           91 -ASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI  149 (380)
Q Consensus        91 -~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l  149 (380)
                       .+.+.+.-.+++..|...+.++.++.|.+.++.++++++|.++..||+++...+++.+-
T Consensus       220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence             34667888899999999999999999999999999999999999999999998887763

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.59  E-value=0.0043  Score=50.55  Aligned_cols=132  Identities=18%  Similarity=0.342  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHH
Q 016904          162 TLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALAL  241 (380)
Q Consensus       162 ~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (380)
                      .++++.+.++-+.+..+..++.++-   -+|..........+.+.+.......+.+... ......+|. ..+|+++...
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~---gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~-~~~~~p~w~-~lGG~lG~~~   77 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKAL---GSPLVASFISFGVGFILLLIILLITGRPSLA-SLSSVPWWA-YLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHHHHHhcccccc-hhccCChHH-hccHHHHHHH
Confidence            5677888888888888888886653   1588888888888888887777666554222 111222333 4478888877


Q ss_pred             HHHHHHHHhhcchhHHHHhhhhhhHHH-HHHHHH-hc--CCCCcchhhhHHHHHHHHHHHH
Q 016904          242 NFSIFLVIGRTGAVTIRVAGVLKDWIL-IALSTV-IF--PESTITGLNIIGYAIALCGVVM  298 (380)
Q Consensus       242 ~~~~~~~i~~~~a~~~s~~~~l~~v~~-~~~~~l-~~--~~~~~~~~~~~G~~lii~g~~~  298 (380)
                      -.+....+++.++.........-.+++ .+++.+ .|  ..+++++.+++|.+++++|+.+
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            777778899999988877766654444 444442 12  2346899999999999999863

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.59  E-value=0.0006  Score=61.96  Aligned_cols=69  Identities=19%  Similarity=0.101  Sum_probs=62.4

Q ss_pred             hHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904           85 PISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus        85 ~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      .+-+.+..+-...+.|+.+.|.+..+-+-++..+..++++..++|||++..-.+|..++++|-.+++..
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence            344567778888999999999999999999999999999999999999999999999999998877764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.54  E-value=0.0012  Score=51.44  Aligned_cols=68  Identities=13%  Similarity=0.196  Sum_probs=60.1

Q ss_pred             hHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           85 PISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        85 ~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      ...+++....++...+++.+|.+.+..+. ....+.+.+.++++++|++++.+++++.+.++|++++..
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44567778888889999999999988885 478899999999999999999999999999999998754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.54  E-value=0.0027  Score=59.49  Aligned_cols=141  Identities=13%  Similarity=0.160  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHH
Q 016904          159 IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCA  238 (380)
Q Consensus       159 ~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (380)
                      +.+++++-.-++|-+...+.+..+.++ +.+.+.. ..+.....-.+...+......+...........+|--++-+++=
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~-Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D   89 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTF-QSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD   89 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHH-HHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence            344555555555555555556665444 3443433 33333333333333333322221111111112234333346777


Q ss_pred             HHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          239 LALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       239 ~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      ...|+....+.++++.+.+.++.....+++.+++++++ .+++++.|++|+.++++|+.+....
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL-~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFL-KRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHH-HhhhhHHHHHHHHHHHhhhhheeee
Confidence            88899999999999999999999999999999999999 6679999999999999999886654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.53  E-value=0.0016  Score=50.45  Aligned_cols=67  Identities=15%  Similarity=0.070  Sum_probs=58.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHHH-HHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhee
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLKA-LMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVIS  150 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~~-~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~  150 (380)
                      +....++....++...+++.+|.+.+-.+-. ...+.+.+.+++++||++++.+++++.+.++|++.+
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3445667778888999999999999777765 778999999999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.53  E-value=0.0017  Score=50.06  Aligned_cols=68  Identities=12%  Similarity=0.081  Sum_probs=59.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHHH-HHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheee
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLKA-LMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~~-~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      +....++..+.++...+++.+|.+.+-.+-. ...+.+.+.+++++||++++.+++++.+.++|++.+.
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3445677888889999999999999877765 7889999999999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.52  E-value=0.0011  Score=50.63  Aligned_cols=69  Identities=17%  Similarity=0.152  Sum_probs=59.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      +...+++..+.++...+++++|.+.+-.+- ..-.+.+.+.++++++|+++..+++++.+.++|++.+-.
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            445567778888999999999999876665 467889999999999999999999999999999987644

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.35  E-value=0.0065  Score=54.84  Aligned_cols=68  Identities=13%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             HHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHH----HHHHHHhhhh
Q 016904           81 TCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFL----NMVLVSVGVV  148 (380)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~----~v~l~~~Gv~  148 (380)
                      ++-+..|+.++.++.++..+.+....+.+-.+..+.++...+.+.+++||+-+++++.    |+++.++|.+
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            4446779999999999999999999999999999999999999999999998888754    4555555554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.15  E-value=0.0014  Score=58.83  Aligned_cols=132  Identities=16%  Similarity=0.153  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHH
Q 016904          161 GTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCALA  240 (380)
Q Consensus       161 G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (380)
                      |.+..++|+++++...|=.||.-     +.|++-..++++....+..+......+.+.+        ..+.+++|.+-..
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-----~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f--------~p~amlgG~lW~~   67 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-----TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF--------YPWAMLGGALWAT   67 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-----CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc--------eeHHHhhhhhhhc
Confidence            56778899999998888777652     2377777777766554444444444333322        1223445666666


Q ss_pred             HHHHHHHHHhhcch-hHHHHhhhhhhHHHHHHHHH-hcCCCC----cchhhhHHHHHHHHHHHHHHHhhhh
Q 016904          241 LNFSIFLVIGRTGA-VTIRVAGVLKDWILIALSTV-IFPEST----ITGLNIIGYAIALCGVVMYNYIKVK  305 (380)
Q Consensus       241 ~~~~~~~~i~~~~a-~~~s~~~~l~~v~~~~~~~l-~~~~~~----~~~~~~~G~~lii~g~~~~~~~~~~  305 (380)
                      .|.+..-.++.++- .-..+.+..+-+.+...|-+ +||.++    -.+++++|.+++++|..++...|..
T Consensus        68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            66666666777653 33445566666777777654 563321    3578999999999999998765543

The region concerned is approximately 280 residues long.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.05  E-value=0.042  Score=44.75  Aligned_cols=120  Identities=11%  Similarity=0.094  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhc
Q 016904           24 SGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLH  103 (380)
Q Consensus        24 ~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  103 (380)
                      ......|-.+-+    ....|+.-++.-+..+.+.+..+....++.+..+.+.-  .+.....|++......+..+....
T Consensus        14 ~~q~~~N~~L~~----~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~--p~w~~lGG~lG~~~V~~~~~~vp~   87 (138)
T PF04657_consen   14 ALQAAFNGQLGK----ALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSV--PWWAYLGGLLGVFFVLSNIILVPR   87 (138)
T ss_pred             HHHHHHHHHHHH----HhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccC--ChHHhccHHHHHHHHHHHHHHhhh
Confidence            333444444444    34349999999999999988877766554322222211  233344788888888888889999


Q ss_pred             ccHhHHHHHHHH-HHHHHHHHHHH----hccccccHhHHHHHHHHHhhhhe
Q 016904          104 ISVAFIQMLKAL-MPVATFFMAVL----CGTDKARLDVFLNMVLVSVGVVI  149 (380)
Q Consensus       104 ~~~~~~~il~~~-~pi~v~ll~~~----~l~ek~~~~~~~~v~l~~~Gv~l  149 (380)
                      ++++.+.++.-+ .-+..+++..+    .-|+++++.|++|+++.++|+.+
T Consensus        88 lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   88 LGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            998887777655 55556666665    35689999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.00  E-value=0.0041  Score=46.97  Aligned_cols=58  Identities=16%  Similarity=0.197  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHH-HHHHHHHHHHHHHHhccccccHhHHHHHHHH
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQML-KALMPVATFFMAVLCGTDKARLDVFLNMVLV  143 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~  143 (380)
                      ...+++.+.++...+++++|.+.+-.+ .....+.+.+.+.+++||+++..+++++.+.
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            344778888999999999999998665 4689999999999999999999999998864

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.88  E-value=0.062  Score=43.95  Aligned_cols=137  Identities=13%  Similarity=0.128  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHH
Q 016904          159 IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCA  238 (380)
Q Consensus       159 ~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (380)
                      +...+..+.+.++-..+.-+..++.+.-   -+|..........+.+.+.......+............+|. ..+|+++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~---~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~-~~GG~lG   79 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYL---GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWA-WIGGLLG   79 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHc---CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHH-HHccchh
Confidence            4567888888888888888888886653   25777777777777777776666544332221112222343 4456776


Q ss_pred             HHHHHHHHHHHhhcchhHHHHhhhh-hhHHHHHHHHHhcCC---CCcchhhhHHHHHHHHHHHHH
Q 016904          239 LALNFSIFLVIGRTGAVTIRVAGVL-KDWILIALSTVIFPE---STITGLNIIGYAIALCGVVMY  299 (380)
Q Consensus       239 ~~~~~~~~~~i~~~~a~~~s~~~~l-~~v~~~~~~~l~~~~---~~~~~~~~~G~~lii~g~~~~  299 (380)
                      ..+-........+.++++.-.+... +.+.+.+++.+=+.+   .+++...++|.+++++|+++.
T Consensus        80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            6655556667888887766555444 444444444433322   458999999999999996553

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.88  E-value=0.0044  Score=55.71  Aligned_cols=75  Identities=15%  Similarity=0.127  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 016904          228 FWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIK  303 (380)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~  303 (380)
                      .+.....+++-...|.+.+.++++.+|.+..++..++.+++.+++++++ +++++..||++..+..+|+.+.....
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L-~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLL-KRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHH-HcccchhhHHHHHHHHHHHheeecCC
Confidence            4555667777777888889999999999999999999999999999999 77799999999999999999866543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.84  E-value=0.0097  Score=46.99  Aligned_cols=56  Identities=11%  Similarity=0.261  Sum_probs=44.4

Q ss_pred             HHHHHhhcchh-HHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          245 IFLVIGRTGAV-TIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       245 ~~~~i~~~~a~-~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ...++++.+.. ..++..-+..+.++++|+++| +|++++.+++|+++|++|+...+.
T Consensus        47 ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f-~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         47 LSFAVKKIALGVAYALWEGIGILFITLFSVLLF-DESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHhhc
Confidence            44566776543 345556678888999999999 778999999999999999988654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.78  E-value=0.012  Score=45.82  Aligned_cols=55  Identities=16%  Similarity=0.118  Sum_probs=43.9

Q ss_pred             HHHHhhcchh-HHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          246 FLVIGRTGAV-TIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       246 ~~~i~~~~a~-~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ..++++.+.. ..++..-+..+.+++.|+++| +|++++.+++|+++|++|+...+.
T Consensus        48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f-~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF-GQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3456666543 345556678888899999999 778999999999999999998754

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.73  E-value=0.004  Score=57.68  Aligned_cols=142  Identities=10%  Similarity=-0.011  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHH-HHHHHhhccCC---CcccHHhhhHHhhh
Q 016904           10 VLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF-FLVRVFKVVSP---VKMTFEIYATCVVP   85 (380)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~~~   85 (380)
                      +.......++.+....-.++.|.++.+++.+++ ++.+..+.--++.+++. ++.........   ...+|.--....+.
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            456667778888888888899999976678888 88888888888887777 65433222111   11122111223333


Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      .+++..+.+...++.+..+++-+.++....--+.+.+.+++++++++++.+.+|.++.++|+.+-..
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            3466666778888999999999999999999999999999999999999999999999999987543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.56  E-value=0.047  Score=51.33  Aligned_cols=139  Identities=13%  Similarity=0.059  Sum_probs=88.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHH--HHhhcCCccc-cc-cchhhHHHHHH
Q 016904          158 NIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVP--WYLLEKPMME-VS-QIQFNFWIFFS  233 (380)
Q Consensus       158 ~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~--~~~~~~~~~~-~~-~~~~~~~~~~~  233 (380)
                      ...|+++.+++++|++-+.+-+|+. |+     -+++...-...+-.-++.|.  ..+..+.... .. .....+...++
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~-----w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-KK-----WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-CC-----CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            3579999999999999999988873 43     33444422111111122221  1111111111 11 11223444566


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhH-HHHhhhhhhHHHHHHHHHhcCCCCcc--------hhhhHHHHHHHHHHHHHHHhhh
Q 016904          234 NALCALALNFSIFLVIGRTGAVT-IRVAGVLKDWILIALSTVIFPESTIT--------GLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       234 ~~~~~~~~~~~~~~~i~~~~a~~-~s~~~~l~~v~~~~~~~l~~~~~~~~--------~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      +|++-...|..++..+++.+-.. ..+..-++.+.+++++.+++ || ++        ...++|.+++++|+.+..+.-.
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~-ge-w~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIIN-GN-FDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHc-cc-cccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            78887778888888888876543 45566678899999999999 65 44        4678999999999999887443

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.56  E-value=0.083  Score=40.99  Aligned_cols=55  Identities=18%  Similarity=0.232  Sum_probs=44.6

Q ss_pred             HHHHHhhcch-hHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          245 IFLVIGRTGA-VTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       245 ~~~~i~~~~a-~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      ...++|+.+. +..++..-+-.+.+.+.|+++| +|++++.+++|+++++.|+...+
T Consensus        52 Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f-~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         52 LSQAVKGIDLSVAYALWGGFGIAATLAAGWILF-GQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHhc
Confidence            3345666654 3467777888899999999999 77799999999999999998753

>TIGR00803 nst UDP-galactose transporter

Probab=96.43  E-value=0.058  Score=47.75  Aligned_cols=66  Identities=11%  Similarity=0.002  Sum_probs=58.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhe
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI  149 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l  149 (380)
                      ....+..+....+..+.++|.+....++...+.++++.++++++++|+++..+++|+.+.+.|+.+
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            334455666677888999999999999999999999999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.37  E-value=0.012  Score=45.82  Aligned_cols=69  Identities=17%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             HHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHH-HHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhee
Q 016904           81 TCVVPISAFFASSLWFGNTAYLHISVAFIQMLK-ALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVIS  150 (380)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~-~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~  150 (380)
                      +..++ -+.+-.+...+++.+...+.+.+.-+. +++=+++++.++++.+|..++++++|+++.++|+.+.
T Consensus        43 ~y~ip-f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIP-FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            34444 344556677888899999999988885 8889999999999999999999999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.32  E-value=0.2  Score=46.59  Aligned_cols=137  Identities=15%  Similarity=0.148  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCC-----ccc----cccchhhHHHHHH
Q 016904          163 LYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKP-----MME----VSQIQFNFWIFFS  233 (380)
Q Consensus       163 ~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~-----~~~----~~~~~~~~~~~~~  233 (380)
                      +..+...+-.+......|...++++..+.|.+..+..-++-.++.+...+..+..     ...    ....+...+-+..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            3344444455555555554434444457788888877777766665555443311     000    0111112334444


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHH
Q 016904          234 NALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYN  300 (380)
Q Consensus       234 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~  300 (380)
                      .+++-..-|-..+...++.+|.+..+...++...+.+++++++ +++++..||...++...|+.+..
T Consensus        98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L-~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLIL-RRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHHh
Confidence            5555555666788899999999999999999999999999999 77799999999999999999876

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.15  E-value=0.061  Score=41.46  Aligned_cols=55  Identities=7%  Similarity=0.065  Sum_probs=44.9

Q ss_pred             HHHHhhcch-hHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          246 FLVIGRTGA-VTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       246 ~~~i~~~~a-~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ..++|+.+. +..++..-+-.+.+.+.|+++| +|++++.+++|+.++++|+...+.
T Consensus        47 s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f-~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         47 AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLL-GESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHhhhc
Confidence            345666543 4567778888899999999999 777999999999999999998643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.03  E-value=0.069  Score=40.91  Aligned_cols=55  Identities=15%  Similarity=0.200  Sum_probs=45.5

Q ss_pred             HHHhhcch-hHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          247 LVIGRTGA-VTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       247 ~~i~~~~a-~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      .++|+.+- +.+++.+-.-.+.+.+.|+++| +|++++.+++|..++++|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f-~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLF-GESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhc-CCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            45676653 3467788888889999999999 7789999999999999999987653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.89  E-value=0.068  Score=49.61  Aligned_cols=118  Identities=19%  Similarity=0.166  Sum_probs=80.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHH
Q 016904          158 NIVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALC  237 (380)
Q Consensus       158 ~~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (380)
                      ...|++++++++++.+....++|+-..+.+..-.+..-.            +.....          ...||..+..-..
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~------------~~~~l~----------~~~W~~G~~~~~~   62 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSG------------GRSYLR----------RPLWWIGLLLMVL   62 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccch------------hhHHHh----------hHHHHHHHHHHhc
Confidence            467999999999999999999999766543210000000            000000          1112222211122


Q ss_pred             HHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          238 ALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       238 ~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      +   +...+.++...++...+.++.+.-++..+++..++ +|+++...++|.++++.|..+...
T Consensus        63 g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l-~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   63 G---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFL-GEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             c---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHh-cccchHhHHhhHHHHHhhheeeEE
Confidence            2   23345567888999999999999999999999999 777999999999999999987543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.88  E-value=0.38  Score=39.39  Aligned_cols=134  Identities=11%  Similarity=0.025  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHH
Q 016904           13 YLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFAS   92 (380)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (380)
                      .+..+..+.+.....-.|-.+-.    ....|+.-.+.-+.++..++..+.....+.+......+. .+.....|++...
T Consensus         7 ll~~i~aG~~l~~Q~~iN~qL~~----~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~-pwW~~~GG~lGa~   81 (150)
T COG3238           7 LLFAILAGALLPLQAAINGRLAR----YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASA-PWWAWIGGLLGAI   81 (150)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHH----HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCC-chHHHHccchhhh
Confidence            33445555555555556666655    455599999999999999888887653322222211222 1222344555444


Q ss_pred             HHHHHhhhhhcccHhHHH-HHHHHHHHHHHHHHHHhc----cccccHhHHHHHHHHHhhhheee
Q 016904           93 SLWFGNTAYLHISVAFIQ-MLKALMPVATFFMAVLCG----TDKARLDVFLNMVLVSVGVVISS  151 (380)
Q Consensus        93 ~~~~~~~al~~~~~~~~~-il~~~~pi~v~ll~~~~l----~ek~~~~~~~~v~l~~~Gv~l~~  151 (380)
                      ...........+.++..+ +..+..-+..+++..+=.    +++++..+++++++.++|+.++.
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            444444555555554444 444556666666665532    46889999999999999965543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.46  E-value=0.21  Score=46.74  Aligned_cols=144  Identities=14%  Similarity=0.059  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCcccHHhhhHHhhhHHH
Q 016904           11 LTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVV--SPVKMTFEIYATCVVPISA   88 (380)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   88 (380)
                      +..++.++-.+....+..+-|.-.++++.+.+-|.++.+.-.+ ..+++++........  ++...+....+..++..++
T Consensus       247 lG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLf-nllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~l  325 (416)
T KOG2765|consen  247 LGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLF-NLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNL  325 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH-HHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhH
Confidence            3333333333333334555677666555567756666555443 445555433332222  2222222211333344444


Q ss_pred             -HHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeeccc
Q 016904           89 -FFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEI  155 (380)
Q Consensus        89 -~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~~  155 (380)
                       .....-+++.+|.-.+++-.+++-.+.+....++.-.++.++++++..++|.+.+++|.+++...+.
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence             3445778999999999999999999999999999999999999999999999999999999887654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.92  E-value=0.083  Score=46.11  Aligned_cols=131  Identities=11%  Similarity=0.108  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHhhhC-CCC---CC----HHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHH
Q 016904          168 GIVAEALRLVLTQVLLQKK-GLT---LN----PITSLYYIAPCSFVFLFVPWYLLEKPMMEVSQIQFNFWIFFSNALCAL  239 (380)
Q Consensus       168 s~~~~a~~~v~~~~~~~~~-~~~---~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (380)
                      --+||-.|.+.++|+.+.+ +..   ..    ...+.+.++....++.=....+.+....  ..  ...+.-.. +-..+
T Consensus        21 ifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~--D~--t~~~~YaA-cs~sY   95 (337)
T KOG1580|consen   21 IFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEI--DN--TPTKMYAA-CSASY   95 (337)
T ss_pred             hhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccc--cC--CcchHHHH-HHHHH
Confidence            3468889999999997753 111   11    2334455555444333222222221111  11  11122222 23333


Q ss_pred             H-HHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHhhh
Q 016904          240 A-LNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       240 ~-~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      . ..+..+.+++..+=-+.-+-...+|+...++|+++. +..-+|....-..+|++|+.++.+.+.
T Consensus        96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~-~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen   96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFA-HKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhh-cccccHHHHHHHHHHHHHHHHhhcccc
Confidence            3 344567788888877788888999999999999999 777999999999999999999887543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.79  E-value=0.12  Score=39.02  Aligned_cols=48  Identities=10%  Similarity=0.043  Sum_probs=26.9

Q ss_pred             HHHHHHhhcchhHH-HHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHH
Q 016904          244 SIFLVIGRTGAVTI-RVAGVLKDWILIALSTVIFPESTITGLNIIGYAIA  292 (380)
Q Consensus       244 ~~~~~i~~~~a~~~-s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~li  292 (380)
                      +...++++.+...+ ++..-+..+.+.+.|+++| +|++++.+++|+.+|
T Consensus        45 ~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f-~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   45 FLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFF-GESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHhheeeC
Confidence            35557888766554 6667788899999999999 777999999999885

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.88  E-value=0.77  Score=41.89  Aligned_cols=136  Identities=10%  Similarity=0.043  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc----cHHhhhHHhhh
Q 016904           10 VLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPVKM----TFEIYATCVVP   85 (380)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~   85 (380)
                      .....++..+...=...+-..+.++.  +++.+ ++.+.+.--+...+.-.......+. -...+    ...+.++.+++
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~--~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFK--KYKVS-SLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhc--cCCcc-HhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHH
Confidence            34555666666655555557777777  66777 7777666666655554444321111 01111    11334678888


Q ss_pred             HHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhe
Q 016904           86 ISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVI  149 (380)
Q Consensus        86 ~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l  149 (380)
                      .+++.+.++.+-+.-++--.+-+.+++..+-=++..+++.++++.+++..+|+++.+.+.|+.+
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            9999999998888888777777777888888999999999999999999999999998888764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=93.77  E-value=0.065  Score=47.75  Aligned_cols=74  Identities=12%  Similarity=-0.023  Sum_probs=62.7

Q ss_pred             cccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhh
Q 016904           73 KMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGV  147 (380)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv  147 (380)
                      +-.+|+ ++.++.+|++..+++.+-..|+|-=-++-.++.+++-.++..+..++++++.++...|.|.++.+...
T Consensus       247 P~cgkd-r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~  320 (346)
T KOG4510|consen  247 PHCGKD-RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSST  320 (346)
T ss_pred             Cccccc-eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhH
Confidence            335566 46667778888899999999999999999999999999999999999999999999998876554433

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.40  E-value=0.33  Score=37.85  Aligned_cols=53  Identities=21%  Similarity=0.248  Sum_probs=41.0

Q ss_pred             HHHHHhhcchhHHHHh-hhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHH
Q 016904          245 IFLVIGRTGAVTIRVA-GVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVM  298 (380)
Q Consensus       245 ~~~~i~~~~a~~~s~~-~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~  298 (380)
                      ++..+++.+-+.+..+ +.+.-+++.+.++++. ||..+...++|+.+++.|+.+
T Consensus        58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lg-e~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLG-EEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhc-CcccchhHHHHHHHHHcCeee
Confidence            3445666665544444 6788888999998888 887899999999999999864

Many members are annotated as potential transmembrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.29  E-value=1.6  Score=37.99  Aligned_cols=127  Identities=11%  Similarity=0.043  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccCCC----cccHHhhhHHhhhHHHHHHH
Q 016904           17 LIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVSPV----KMTFEIYATCVVPISAFFAS   92 (380)
Q Consensus        17 ~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~   92 (380)
                      ......+..+.+..|...+  --++. -+.-.++.-+++..++..+-.......+.    ..+... ...+++.|++..+
T Consensus       161 ~~NclssaafVL~mrkri~--ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~-l~am~ISgl~svg  236 (309)
T COG5070         161 FTNCLSSAAFVLIMRKRIK--LTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDS-LMAMFISGLCSVG  236 (309)
T ss_pred             ehhhHhHHHHHHHHHHhhc--ccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHH-HHHHHHHHHHHhh
Confidence            3344445555555555544  22444 44566777777777766655444433322    122222 3456777888888


Q ss_pred             HHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhh
Q 016904           93 SLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGV  147 (380)
Q Consensus        93 ~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv  147 (380)
                      ..++.-|.++.++....++..++.-...++.+.+++.|..+...+.++++++...
T Consensus       237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg  291 (309)
T COG5070         237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSG  291 (309)
T ss_pred             hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999998888888877765543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=91.87  E-value=0.11  Score=45.72  Aligned_cols=96  Identities=17%  Similarity=0.126  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHHHHhhccCCCcccHHhhhHHhhhHHHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccc
Q 016904           51 HMGFSGVVAFFLVRVFKVVSPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTD  130 (380)
Q Consensus        51 r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~e  130 (380)
                      -.+++.++..+..-..+   ..+...|. .++-...|+.++.++.++..|-+....++.-.+..+..+...+-+.+++||
T Consensus       184 PqAiGMv~~ali~~~~~---~~~~~~K~-t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e  259 (288)
T COG4975         184 PQAIGMVIGALILGFFK---MEKRFNKY-TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE  259 (288)
T ss_pred             HHHHHHHHHHHHHhhcc---cccchHHH-HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec
Confidence            34445555554443222   22223333 445566699999999999999999999998889999999999999999999


Q ss_pred             cccHhHHH----HHHHHHhhhhee
Q 016904          131 KARLDVFL----NMVLVSVGVVIS  150 (380)
Q Consensus       131 k~~~~~~~----~v~l~~~Gv~l~  150 (380)
                      |-+++++.    |+++.++|..++
T Consensus       260 kKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         260 KKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             cCchhhhhhhhhhHHHHHHHhhhh
Confidence            99999854    555555565543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.66  E-value=7.5  Score=36.40  Aligned_cols=141  Identities=13%  Similarity=0.087  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHH-hhcCCccc---cccchhhHHHHHHH
Q 016904          159 IVGTLYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWY-LLEKPMME---VSQIQFNFWIFFSN  234 (380)
Q Consensus       159 ~~G~~l~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-~~~~~~~~---~~~~~~~~~~~~~~  234 (380)
                      ..|+++..+++++.+.+.+-.||. |+     -..+.....+-+-..+.+|... ....|+..   .......++...+.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-k~-----WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-KG-----WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-CC-----ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            579999999999999999888876 32     4455555444434444455432 22223222   11122223333333


Q ss_pred             HHHHHHHHHHHHHHHhhcch-hHHHHhhhhhhHHHHHHHHHhcC------CCCcchhhhHHHHHHHHHHHHHHHhhhh
Q 016904          235 ALCALALNFSIFLVIGRTGA-VTIRVAGVLKDWILIALSTVIFP------ESTITGLNIIGYAIALCGVVMYNYIKVK  305 (380)
Q Consensus       235 ~~~~~~~~~~~~~~i~~~~a-~~~s~~~~l~~v~~~~~~~l~~~------~~~~~~~~~~G~~lii~g~~~~~~~~~~  305 (380)
                      |++--+....+=..+++.+- ...++.--+..++..++--++.|      +.+-....++|.+++++|+.+..+....
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence            44433333333334555442 22333333334444444333321      1223457889999999999998875443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.21  E-value=1.8  Score=39.85  Aligned_cols=138  Identities=13%  Similarity=0.068  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcHHHHHHHHHHHHHHHHHHHHHHhhccC-----CCcccHHhhhHHhhhH
Q 016904           12 TYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAFFLVRVFKVVS-----PVKMTFEIYATCVVPI   86 (380)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   86 (380)
                      ...++....+.......+.|...+..  ++. -+-+.++.-++....+.......+..+     .........+..+...
T Consensus       158 gY~w~~~n~~~~a~~~v~~kk~vd~~--~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS  234 (314)
T KOG1444|consen  158 GYSWALANCLTTAAFVVYVKKSVDSA--NLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS  234 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccc--ccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence            34555566666666677777777733  333 344666666666665555544444322     1011111113444444


Q ss_pred             HHHHHHHHHHHhhhhhcccHhHHHHHHHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeee
Q 016904           87 SAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSY  152 (380)
Q Consensus        87 ~~~~~~~~~~~~~al~~~~~~~~~il~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~  152 (380)
                      +++..+-.++..+..+..++.+.++.-...-..+.+...++.+++.++...+|+.+++.|-++-.+
T Consensus       235 cv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  235 CVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            555556778899999999999888888666777777777778888899888888888888766543

>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed

Probab=89.65  E-value=22  Score=35.03  Aligned_cols=24  Identities=13%  Similarity=-0.054  Sum_probs=20.0

Q ss_pred             cchhhhHHHHHHHHHHHHHHHhhh
Q 016904          281 ITGLNIIGYAIALCGVVMYNYIKV  304 (380)
Q Consensus       281 ~~~~~~~G~~lii~g~~~~~~~~~  304 (380)
                      ++..|++.+.++++|++++.+.++
T Consensus       254 l~~~Q~lSl~~il~gl~~~~~~~~  277 (460)
T PRK13108        254 IRINSFTSTFVFIGAVVYIILAPK  277 (460)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhc
Confidence            788999999999999887766443

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=87.87  E-value=0.71  Score=42.11  Aligned_cols=73  Identities=14%  Similarity=0.087  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhh-hhhhHHHHHHHHHhcCCCCcc--hhhhHHHHHHHHHHHHHHHh
Q 016904          228 FWIFFSNALCALALNFSIFLVIGRTGAVTIRVAG-VLKDWILIALSTVIFPESTIT--GLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~s~~~-~l~~v~~~~~~~l~~~~~~~~--~~~~~G~~lii~g~~~~~~~  302 (380)
                      +...+.+|++--+.|++..+++...+-..+-.++ .+.-++.+++-+++  |.+.+  ..-+.|.+++++++++-...
T Consensus        72 v~~A~aGGvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl--d~~~n~a~iLF~GV~cf~iAI~lga~a  147 (336)
T PF07168_consen   72 VLFAMAGGVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL--DPKINRAEILFPGVACFLIAIILGAAA  147 (336)
T ss_pred             HHHHHHhhHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec--cCCCCCceEEEccHHHHHHHHHHHHHH
Confidence            3344556776666777766666665543221111 11222333333333  44454  35567888888888775543

Transport is dependent on glucose and a proton gradient [].

>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

Probab=85.87  E-value=0.24  Score=44.42  Aligned_cols=83  Identities=12%  Similarity=0.072  Sum_probs=0.0

Q ss_pred             ccHhHHHHHHHHHHHHHHHHH-HHhccc-cccHhHHHHHHHHHhhhheeeecc--ceehHHHHHHHHHHHHHHHHHHHHH
Q 016904          104 ISVAFIQMLKALMPVATFFMA-VLCGTD-KARLDVFLNMVLVSVGVVISSYGE--IHFNIVGTLYQVTGIVAEALRLVLT  179 (380)
Q Consensus       104 ~~~~~~~il~~~~pi~v~ll~-~~~l~e-k~~~~~~~~v~l~~~Gv~l~~~~~--~~~~~~G~~l~l~s~~~~a~~~v~~  179 (380)
                      .+-+..+++.+...+++.++- ++++|+ -+-+.-.++++++++-+.+...-.  .+.-+.|+++.+..++..-..+.+.
T Consensus        47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym  126 (381)
T PF05297_consen   47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYM  126 (381)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444555555444444333 233444 446666777777766655544322  2334567665555544433333332


Q ss_pred             HHHhhhCC
Q 016904          180 QVLLQKKG  187 (380)
Q Consensus       180 ~~~~~~~~  187 (380)
                       .++++.+
T Consensus       127 -~lLr~~G  133 (381)
T PF05297_consen  127 -WLLRELG  133 (381)
T ss_dssp             --------
T ss_pred             -HHHHHhh
Confidence             2445543

LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=85.56  E-value=0.56  Score=39.96  Aligned_cols=62  Identities=18%  Similarity=0.355  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          240 ALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       240 ~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      +.++.+..++++.+|+.++.....+..+..+++++++|| ++....++..++.+.|+++..+.
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D-~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGD-RFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhcc-chhhhhHHHHHHHhCcEEEEEec
Confidence            345667778999999999999999999999999999955 59999999999999888776543

>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins

Probab=82.88  E-value=14  Score=33.22  Aligned_cols=47  Identities=13%  Similarity=0.012  Sum_probs=29.5

Q ss_pred             HHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHH
Q 016904          248 VIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVV  297 (380)
Q Consensus       248 ~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~  297 (380)
                      +.++-+++.....+.++-.+-++-..+++ ..  +...-+|.+++++.+.
T Consensus       115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~-~s--s~~~~~a~~~i~~~l~  161 (249)
T PF10225_consen  115 CYRYGPPVDPRSRNFVKWALQLIGLVLIY-FS--SQDPEFAFAAIILLLL  161 (249)
T ss_pred             hcccCCCccHhHHHHHHHHHHHHHHHHHH-HH--cCcHHHHHHHHHHHHH
Confidence            44577777777777787777777777777 32  3334445555555444

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=81.78  E-value=20  Score=32.63  Aligned_cols=67  Identities=22%  Similarity=0.273  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcchhHHHHhhhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          234 NALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       234 ~~~~~~~~~~~~~~~i~~~~a~~~s~~~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      .+++-.......+.++..++|+...+.--...+++-+++.-++ +..++..||+|+..+++|++....
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~L-n~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFL-NRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHH-hcccchhhHHHHHHHHhhhheeee
Confidence            3444444444456677888888888888888999999999999 667999999999999999987543

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=81.74  E-value=24  Score=30.61  Aligned_cols=47  Identities=21%  Similarity=0.330  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 016904          160 VGTLYQVTGIVAEALRLVLTQ-VLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYL  213 (380)
Q Consensus       160 ~G~~l~l~s~~~~a~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~  213 (380)
                      ...++.+.+-++-|...++.. ..       +.-.+++-|.+.+..++++..++.
T Consensus        30 ~s~l~Li~~f~~vA~l~~ll~a~F-------la~~qIiVYvGAI~VLflFvIMll   77 (198)
T PRK06638         30 HSALFLILTFLSIAGLYFLLGAEF-------LGVVQIIVYVGAVMVLFLFVVMML   77 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHhchHH-------HHHHHHHHHHHHHHHHHHHHHHHc
Confidence            344555555555554333332 22       244666677777776666666654

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=80.69  E-value=23  Score=27.06  Aligned_cols=52  Identities=12%  Similarity=0.165  Sum_probs=35.2

Q ss_pred             hhhhcccHhHHHHHHH-HHHHHHHHHHHHhccccccHhHHHHHHHHHhhhhee
Q 016904           99 TAYLHISVAFIQMLKA-LMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVIS  150 (380)
Q Consensus        99 ~al~~~~~~~~~il~~-~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~  150 (380)
                      +|.+.-+.+.--++.- .+...-+.++++++||++++....|.++.++++..+
T Consensus        54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            3444444444444433 334445667889999999999999999988887654

>PRK02237 hypothetical protein; Provisional

Probab=80.11  E-value=25  Score=27.04  Aligned_cols=40  Identities=8%  Similarity=0.158  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904          114 ALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus       114 ~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      ....+...+..+++-++|+++..++|..++++|+.++.+.
T Consensus        67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            4556666788899999999999999999999999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	380
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 66/373 (17%), Positives = 107/373 (28%), Gaps = 102/373 (27%)

Query: 1   MKMMINKPLVLTYLYLLIYILLSSGVILYNKWVLSPKYFNFPFPITLTMIHMGFSGVVAF 60
           +  +I     ++    L + LLS    +  K+V      N+                   
Sbjct: 51  IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK------------------ 92

Query: 61  FLVRVFKVVS--PVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISV-------AFIQM 111
           FL+   K     P  MT  +Y              L+  N  +   +V          Q 
Sbjct: 93  FLMSPIKTEQRQPSMMT-RMYIEQR--------DRLYNDNQVFAKYNVSRLQPYLKLRQA 143

Query: 112 LKALMP---VATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGEIHFNIVGTLYQVTG 168
           L  L P   V    +    G+ K         V +S  V      +I +  +        
Sbjct: 144 LLELRPAKNVLIDGVL---GSGKT---WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 169 IVA--EALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWY---LLEKPMMEVSQ 223
           ++   + L   +      +   + N    ++ I       L    Y   LL         
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL--------- 248

Query: 224 IQFNFWIFFSNALCALALNFS--IFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTI 281
           +  N      NA    A N S  I L+  R   VT        D++  A +T I  +   
Sbjct: 249 VLLNVQ----NAKAWNAFNLSCKI-LLTTRFKQVT--------DFLSAATTTHISLDHHS 295

Query: 282 TGLNIIGYAIALCGVVMYNYIKVKDVRASSQLP--------------AESIPDRIA--KD 325
             L       +L       Y+  +       LP              AESI D +A   +
Sbjct: 296 MTLT-PDEVKSLLL----KYLDCR----PQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 326 WK---LEKKSSDI 335
           WK    +K ++ I
Sbjct: 347 WKHVNCDKLTTII 359

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	380
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.54
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.46
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.4
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.1

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.54  E-value=1.1e-07  Score=76.02  Aligned_cols=66  Identities=17%  Similarity=0.165  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHHHhhcchhHHHHh-hhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHHh
Q 016904          236 LCALALNFSIFLVIGRTGAVTIRVA-GVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYI  302 (380)
Q Consensus       236 ~~~~~~~~~~~~~i~~~~a~~~s~~-~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~~  302 (380)
                      ++....++++..++++.++..+..+ ..+.|++++++|+++| +|++++.+++|+++|++|+++.+..
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~l-gE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF-GQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHH-C------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3444455667889999999988777 8999999999999999 7779999999999999999987653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.46  E-value=5.2e-07  Score=69.58  Aligned_cols=71  Identities=15%  Similarity=0.206  Sum_probs=63.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHH-HHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeecc
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQML-KALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYGE  154 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~~  154 (380)
                      +...+++....++...++++.|.+.+..+ ..+.|+++++++++++||++++.+++|+.++++|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45556778888999999999999999888 799999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.40  E-value=7.9e-07  Score=71.05  Aligned_cols=70  Identities=16%  Similarity=0.207  Sum_probs=52.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhcccHhHHHHH-HHHHHHHHHHHHHHhccccccHhHHHHHHHHHhhhheeeec
Q 016904           84 VPISAFFASSLWFGNTAYLHISVAFIQML-KALMPVATFFMAVLCGTDKARLDVFLNMVLVSVGVVISSYG  153 (380)
Q Consensus        84 ~~~~~~~~~~~~~~~~al~~~~~~~~~il-~~~~pi~v~ll~~~~l~ek~~~~~~~~v~l~~~Gv~l~~~~  153 (380)
                      +...+++++..++++.+++++|++.+..+ .++.|++++++++++++|++++.+++|++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            45566788899999999999999999888 89999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.10  E-value=1.4e-05  Score=61.54  Aligned_cols=63  Identities=16%  Similarity=0.082  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHhhcchhHHHHh-hhhhhHHHHHHHHHhcCCCCcchhhhHHHHHHHHHHHHHHH
Q 016904          238 ALALNFSIFLVIGRTGAVTIRVA-GVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNY  301 (380)
Q Consensus       238 ~~~~~~~~~~~i~~~~a~~~s~~-~~l~~v~~~~~~~l~~~~~~~~~~~~~G~~lii~g~~~~~~  301 (380)
                      ....++++..++++.+...+..+ ..+.|+.+.++++++| +|++++.+++|.++|+.|++..+.
T Consensus        40 ~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~-~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF-GQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33344556678999999988777 8999999999999999 777999999999999999998754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00