Citrus Sinensis ID: 016916

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MKSSHNGENLCFPTVRMSSSSSSSSSSSLFNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
ccccccccccccccccccccccccccccccccccccEEEEEccccccccEEEEEEEEcccccEEEEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEEEEEEEccccccccccEEEEEEEEcccccccccccEEEEccccccHHHHHHccccccccEEEEEccccccEEEEEcccccccccEEEEEccccccccccEEEEEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEccccEEEEEccccEEEEEEEcccccccccEEEEEccccc
cccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEccccccEEEEEEcccccEEEEccccccHccccccccccccccccccccHHHHHHccccccccccccccEEEEEEEccccccEEEEEEEEEEEccccccccccEEEEEEccccccccccccccEEccccccccHHHHHHHccccccEEEEEEccccccEEEEcccccccccEEEEEEccccccEEEEcccEEEEccEEEEccccEEEEEcccEEEEccHHHHHHHHHHHHccccccccccccccccccHHccccccEEEEcccccccccEEEEEccccEEEEEEccHcHEEEEEcccEEEEEEccccccccccEEEEEcccccc
mksshngenlcfptvrmssssssssssslfnhvgssllfqvhgnvyptgyynvtmyigqparpyfldldtgsdltwlqcdapcvrcveaphplyrpsndlvpcedpicaslhapghhncedpaqcdyeleyadggsslgVLVKDAfafnytngqrlnprlalgcgynqvpgasyhpldgilglgkgkssIVSQLHSQKLIRNVVGhclsgggggflffgddlydssrVVWTSmssdytkyyspgvaelffggettglknlpvvfdsgssytylNRVTYQTLTSIMKKELSAkslkeapedetlplcwkgrrpfknvhDVKKCFRTLALsftdgktrtlfeltpEAYLIISNKGNVCLGIlngaevglqdlnviggigdfv
mksshngenLCFPTVRMSSSSSSSSSSSLFNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELsakslkeapedetlplcwkgrrpfknvhdVKKCFRTlalsftdgktrTLFELTPEAYLIISNKGNVCLGILNGaevglqdlnviggigdfv
MKSSHNGENLCFPTVRMsssssssssssLFNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHClsgggggflffgddlydssRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
*****************************FNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHC********LFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMK***************TLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIG***
********************************************VYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVE************VPCEDPICA*************AQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSA******PEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
********NLCFPTV***************NHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
*****NGENLCFPTVRMSSSSSSSSSS*******SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKSSHNGENLCFPTVRMSSSSSSSSSSSLFNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGDFV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query380 2.2.26 [Sep-21-2011]
Q0IU52410 Aspartic proteinase Asp1 no no 0.878 0.814 0.469 7e-83
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.884 0.819 0.466 1e-80
Q9S9K4475 Aspartic proteinase-like no no 0.823 0.658 0.25 8e-20
Q766C3437 Aspartic proteinase nepen N/A no 0.778 0.677 0.247 2e-16
Q9LX20528 Aspartic proteinase-like no no 0.607 0.437 0.286 3e-16
Q766C2438 Aspartic proteinase nepen N/A no 0.757 0.657 0.241 3e-16
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.807 0.614 0.259 4e-13
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.352 0.285 0.3 2e-10
Q3EBM5447 Probable aspartic proteas no no 0.376 0.319 0.306 4e-10
Q6XBF8437 Aspartic proteinase CDR1 no no 0.684 0.594 0.268 1e-08
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function desciption
 Score =  307 bits (787), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 169/360 (46%), Positives = 229/360 (63%), Gaps = 26/360 (7%)

Query: 35  SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY 94
           S+++ ++HGNVYP G++ +TM IG PA+ YFLD+DTGS LTWLQCDAPC  C   PH LY
Sbjct: 22  SAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHVLY 81

Query: 95  RPS-NDLVPCEDPICASLHAP--GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYT 151
           +P+   LV C D +C  L+        C    QCDY ++Y D  SS+GVLV D F+ + +
Sbjct: 82  KPTPKKLVTCADSLCTDLYTDLGKPKRCGSQKQCDYVIQYVD-SSSMGVLVIDRFSLSAS 140

Query: 152 NGQRLNP-RLALGCGYNQ------VPGASYHPLDGILGLGKGKSSIVSQLHSQKLI-RNV 203
           NG   NP  +A GCGY+Q      VP     P+D ILGL +GK +++SQL SQ +I ++V
Sbjct: 141 NGT--NPTTIAFGCGYDQGKKNRNVP----IPVDSILGLSRGKVTLLSQLKSQGVITKHV 194

Query: 204 VGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLP-- 261
           +GHC+S  GGGFLFFGD    +S V WT M+ ++ KYYSPG   L F   +  +   P  
Sbjct: 195 LGHCISSKGGGFLFFGDAQVPTSGVTWTPMNREH-KYYSPGHGTLHFDSNSKAISAAPMA 253

Query: 262 VVFDSGSSYTYLNRVTYQTLTSIMKKELSA--KSLKEAPE-DETLPLCWKGRRPFKNVHD 318
           V+FDSG++YTY     YQ   S++K  L++  K L E  E D  L +CWKG+     + +
Sbjct: 254 VIFDSGATYTYFAAQPYQATLSVVKSTLNSECKFLTEVTEKDRALTVCWKGKDKIVTIDE 313

Query: 319 VKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAE--VGLQDLNVIGGI 376
           VKKCFR+L+L F DG  +   E+ PE YLIIS +G+VCLGIL+G++  + L   N+IGGI
Sbjct: 314 VKKCFRSLSLEFADGDKKATLEIPPEHYLIISQEGHVCLGILDGSKEHLSLAGTNLIGGI 373

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
334187133425 aspartyl protease family protein [Arabid 0.921 0.823 0.699 1e-146
297798582425 hypothetical protein ARALYDRAFT_328390 [ 0.921 0.823 0.699 1e-146
79495937401 aspartyl protease family protein [Arabid 0.918 0.870 0.701 1e-146
26452545413 putative nucellin [Arabidopsis thaliana] 0.921 0.847 0.699 1e-145
312282457424 unnamed protein product [Thellungiella h 0.923 0.827 0.694 1e-145
225438361426 PREDICTED: aspartic proteinase Asp1 [Vit 0.926 0.826 0.700 1e-144
4490316420 nucellin-like protein [Arabidopsis thali 0.9 0.814 0.676 1e-142
255563835433 nucellin, putative [Ricinus communis] gi 0.95 0.833 0.695 1e-141
147802609424 hypothetical protein VITISV_037997 [Viti 0.921 0.825 0.683 1e-138
118486628393 unknown [Populus trichocarpa] 0.936 0.905 0.701 1e-137
>gi|334187133|ref|NP_001190905.1| aspartyl protease family protein [Arabidopsis thaliana] gi|21592493|gb|AAM64443.1| nucellin-like protein [Arabidopsis thaliana] gi|332660834|gb|AEE86234.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/353 (69%), Positives = 291/353 (82%), Gaps = 3/353 (0%)

Query: 27  SSLFNHVGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRC 86
           S  F    SS++F VHGNVYP GYYNVT+ IGQP RPY+LDLDTGSDLTWLQCDAPCVRC
Sbjct: 36  SDRFTRAVSSVVFPVHGNVYPLGYYNVTINIGQPPRPYYLDLDTGSDLTWLQCDAPCVRC 95

Query: 87  VEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAF 146
           +EAPHPLY+PS+DL+PC DP+C +LH   +  CE P QCDYE+EYADGGSSLGVLV+D F
Sbjct: 96  LEAPHPLYQPSSDLIPCNDPLCKALHLNSNQRCETPEQCDYEVEYADGGSSLGVLVRDVF 155

Query: 147 AFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVG 205
           + NYT G RL PRLALGCGY+Q+PGA S+HPLDG+LGLG+GK SI+SQLHSQ  ++NV+G
Sbjct: 156 SMNYTQGLRLTPRLALGCGYDQIPGASSHHPLDGVLGLGRGKVSILSQLHSQGYVKNVIG 215

Query: 206 HCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDYTKYYSPGV-AELFFGGETTGLKNLPVVF 264
           HCLS  GGG LFFGDDLYDSSRV WT MS +Y+K+YSP +  EL FGG TTGLKNL  VF
Sbjct: 216 HCLSSLGGGILFFGDDLYDSSRVSWTPMSREYSKHYSPAMGGELLFGGRTTGLKNLLTVF 275

Query: 265 DSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFR 324
           DSGSSYTY N   YQ +T ++K+ELS K LKEA +D TLPLCW+GRRPF ++ +VKK F+
Sbjct: 276 DSGSSYTYFNSKAYQAVTYLLKRELSGKPLKEARDDHTLPLCWQGRRPFMSIEEVKKYFK 335

Query: 325 TLALSFTDG-KTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGI 376
            LALSF  G +++TLFE+ PEAYLIIS KGNVCLGILNG E+GLQ+LN+IG I
Sbjct: 336 PLALSFKTGWRSKTLFEIPPEAYLIISMKGNVCLGILNGTEIGLQNLNLIGDI 388

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297798582|ref|XP_002867175.1| hypothetical protein ARALYDRAFT_328390 [Arabidopsis lyrata subsp. lyrata] gi|297313011|gb|EFH43434.1| hypothetical protein ARALYDRAFT_328390 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79495937|ref|NP_567922.2| aspartyl protease family protein [Arabidopsis thaliana] gi|332660833|gb|AEE86233.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|26452545|dbj|BAC43357.1| putative nucellin [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312282457|dbj|BAJ34094.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|225438361|ref|XP_002273988.1| PREDICTED: aspartic proteinase Asp1 [Vitis vinifera] gi|296082608|emb|CBI21613.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|4490316|emb|CAB38807.1| nucellin-like protein [Arabidopsis thaliana] gi|7270297|emb|CAB80066.1| nucellin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255563835|ref|XP_002522918.1| nucellin, putative [Ricinus communis] gi|223537845|gb|EEF39461.1| nucellin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147802609|emb|CAN73001.1| hypothetical protein VITISV_037997 [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486628|gb|ABK95151.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
TAIR|locus:2205861405 AT1G44130 [Arabidopsis thalian 0.897 0.841 0.486 4e-90
TAIR|locus:2204725466 AT1G77480 [Arabidopsis thalian 0.905 0.738 0.454 6.4e-83
TAIR|locus:2028466583 AT1G49050 [Arabidopsis thalian 0.889 0.579 0.396 6.6e-58
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.844 0.507 0.264 3.8e-26
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.823 0.496 0.271 4.6e-25
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.815 0.639 0.286 1.8e-22
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.797 0.639 0.279 9.7e-22
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.802 0.625 0.285 1.8e-21
TAIR|locus:2198753485 AT1G05840 [Arabidopsis thalian 0.415 0.325 0.331 2.6e-20
TAIR|locus:505006268458 AT2G23945 [Arabidopsis thalian 0.418 0.347 0.369 5.9e-20
TAIR|locus:2205861 AT1G44130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
 Identities = 168/345 (48%), Positives = 225/345 (65%)

Query:    35 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY 94
             SS++F + GNV+P GYY+V M IG P + +  D+DTGSDLTW+QCDAPC  C   P+  Y
Sbjct:    33 SSVVFPLSGNVFPLGYYSVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGCTLPPNLQY 92

Query:    95 RPSNDLVPCEDPICASLHAPGHHNCEDPA-QCDYELEYADGGSSLGVLVKDAFAFNYTNG 153
             +P  +++PC +PIC +LH P   +C +P  QCDYE++YAD GSS+G LV D F     NG
Sbjct:    93 KPKGNIIPCSNPICTALHWPNKPHCPNPQEQCDYEVKYADQGSSMGALVTDQFPLKLVNG 152

Query:   154 QRLNPRLALGCGYNQ-VPGASYHPLD-GILGLGKGKSSIVSQLHSQKLIRNVVGHCXXXX 211
               + P +A GCGY+Q  P A   P   G+LGLG+GK  +++QL S  L RNVVGHC    
Sbjct:   153 SFMQPPVAFGCGYDQSYPSAHPPPATAGVLGLGRGKIGLLTQLVSAGLTRNVVGHCLSSK 212

Query:   212 XXXXXXXXXXXXXXXRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYT 271
                             V WT + S    +Y+ G A+L F G+ TGLK L ++FD+GSSYT
Sbjct:   213 GGGFLFFGDNLVPSIGVAWTPLLSQ-DNHYTTGPADLLFNGKPTGLKGLKLIFDTGSSYT 271

Query:   272 YLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFT 331
             Y N   YQT+ +++  +L    LK A ED+TLP+CWKG +PFK+V +VK  F+T+ ++FT
Sbjct:   272 YFNSKAYQTIINLIGNDLKVSPLKVAKEDKTLPICWKGAKPFKSVLEVKNFFKTITINFT 331

Query:   332 DGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGI 376
             +G+  T   L PE YLI+S  GNVCLG+LNG+EVGLQ+ NVIG I
Sbjct:   332 NGRRNTQLYLAPELYLIVSKTGNVCLGLLNGSEVGLQNSNVIGDI 376
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2204725 AT1G77480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028466 AT1G49050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006268 AT2G23945 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-124
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 3e-41
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-35
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-29
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 3e-21
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 2e-18
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-09
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 8e-09
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 4e-07
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 0.002
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information 
 Score =  358 bits (921), Expect = e-124
 Identities = 159/331 (48%), Positives = 181/331 (54%), Gaps = 84/331 (25%)

Query: 49  GYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPIC 108
           GYY VT+ IG P +PYFLD+DTGSDLTWLQCDAPC  C                      
Sbjct: 1   GYYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC---------------------- 38

Query: 109 ASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQ 168
                          QCDYE+EYADGGSS+GVLV D F+   TNG R  PR+A GCGY+Q
Sbjct: 39  ---------------QCDYEIEYADGGSSMGVLVTDIFSLKLTNGSRAKPRIAFGCGYDQ 83

Query: 169 VPGA--SYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLYDSS 226
                    P DGILGLG+GK S+ SQL SQ +I+NV+GHCLS  GGGFLFFGDDL  SS
Sbjct: 84  QGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSNGGGFLFFGDDLVPSS 143

Query: 227 RVVWTSMSSD-YTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIM 285
            V WT M  +   K+YSPG A L F G+ TG K L VVFDSGSSYTY N   Y       
Sbjct: 144 GVTWTPMRRESQKKHYSPGPASLLFNGQPTGGKGLEVVFDSGSSYTYFNAQAY------- 196

Query: 286 KKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEA 345
                                                F+ L L F  G    L E+ PE 
Sbjct: 197 -------------------------------------FKPLTLKFGKGWRTRLLEIPPEN 219

Query: 346 YLIISNKGNVCLGILNGAEVGLQDLNVIGGI 376
           YLIIS KGNVCLGILNG+E+GL + N+IG I
Sbjct: 220 YLIISEKGNVCLGILNGSEIGLGNTNIIGDI 250

Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 380
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.77
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.89
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.22
PF1365090 Asp_protease_2: Aspartyl protease 95.05
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.45
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.52
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.84
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 85.8
PF1365090 Asp_protease_2: Aspartyl protease 82.23
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.4e-52  Score=413.22  Aligned_cols=307  Identities=28%  Similarity=0.518  Sum_probs=250.7

Q ss_pred             CCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCC----CCCCCCccccCcCCCCCCCCCCC
Q 016916           47 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSND----LVPCEDPICASLHAPGHHNCEDP  122 (380)
Q Consensus        47 ~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S----~~~c~~~~c~~~~~~~~~~c~~~  122 (380)
                      .+++|+++|.||||||++.|++||||+++||+|. +|..|..+.++.|||++|    .++|+++.|+.+..  ...|..+
T Consensus        81 ~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~~  157 (431)
T PLN03146         81 NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCK-PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSDE  157 (431)
T ss_pred             CCccEEEEEEcCCCCceEEEEECCCCCcceEcCC-CCcccccCCCCcccCCCCCCCcccCCCCcccccCCC--CCCCCCC
Confidence            4579999999999999999999999999999999 999999888899999999    38999999987653  2347666


Q ss_pred             CCCceeEEeCCCCeEEEEEEEEEEEEeecCC-CcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCchhhhcccccccc
Q 016916          123 AQCDYELEYADGGSSLGVLVKDAFAFNYTNG-QRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKLIR  201 (380)
Q Consensus       123 ~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g-~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~~g~i~  201 (380)
                      +.|.|.+.|++|+.+.|.+++|+|+|++..+ ...++++.|||++...+.+. ...+||||||+..+|++.||...  +.
T Consensus       158 ~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~-~~~~GilGLG~~~~Sl~sql~~~--~~  234 (431)
T PLN03146        158 NTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFD-EKGSGIVGLGGGPLSLISQLGSS--IG  234 (431)
T ss_pred             CCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCcc-CCCceeEecCCCCccHHHHhhHh--hC
Confidence            6799999999998889999999999975321 13578999999987644332 25799999999999999998753  55


Q ss_pred             ceeeeeecC-----CCceeEEECCCCCCC-CCcEEeecccCC-CCCeeEEeeEEEECCEEeeeCC--------CCEEEcc
Q 016916          202 NVVGHCLSG-----GGGGFLFFGDDLYDS-SRVVWTSMSSDY-TKYYSPGVAELFFGGETTGLKN--------LPVVFDS  266 (380)
Q Consensus       202 ~~Fs~~l~~-----~~~G~l~~G~~~~~~-g~l~~~pl~~~~-~~~w~v~l~~i~vg~~~~~~~~--------~~aiiDS  266 (380)
                      ++||+||.+     ...|.|+||+..+.. +.+.|+|++... ..+|.|.|++|+||++.+.++.        +.+||||
T Consensus       235 ~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDS  314 (431)
T PLN03146        235 GKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDS  314 (431)
T ss_pred             CcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeC
Confidence            699999963     247999999865443 458999998642 2799999999999999876532        4799999


Q ss_pred             cccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeE
Q 016916          267 GSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAY  346 (380)
Q Consensus       267 GTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y  346 (380)
                      ||++++||+++|++|.++|.+++....  .......+++||+...      .  ..+|+|+|+|+|    ++++|++++|
T Consensus       315 GTt~t~Lp~~~y~~l~~~~~~~~~~~~--~~~~~~~~~~C~~~~~------~--~~~P~i~~~F~G----a~~~l~~~~~  380 (431)
T PLN03146        315 GTTLTLLPSDFYSELESAVEEAIGGER--VSDPQGLLSLCYSSTS------D--IKLPIITAHFTG----ADVKLQPLNT  380 (431)
T ss_pred             CccceecCHHHHHHHHHHHHHHhcccc--CCCCCCCCCccccCCC------C--CCCCeEEEEECC----CeeecCccee
Confidence            999999999999999999998886431  1112234578997431      1  358999999996    9999999999


Q ss_pred             EEEeCCCeEEEEEEeCCcCCCCCeeEEccccc
Q 016916          347 LIISNKGNVCLGILNGAEVGLQDLNVIGGIGD  378 (380)
Q Consensus       347 ~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~~  378 (380)
                      ++...++..|+++....     +.||||++|+
T Consensus       381 ~~~~~~~~~Cl~~~~~~-----~~~IlG~~~q  407 (431)
T PLN03146        381 FVKVSEDLVCFAMIPTS-----SIAIFGNLAQ  407 (431)
T ss_pred             EEEcCCCcEEEEEecCC-----CceEECeeeE
Confidence            99877678899987643     3699999976

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 6e-61
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 1e-60
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 6e-57
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-11
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 3e-11
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-10
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 6e-09
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-08
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 6e-08
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 7e-08
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-07
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 3e-07
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 3e-07
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-07
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-07
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 5e-07
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 8e-07
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 8e-07
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-06
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-06
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-06
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-06
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 7e-06
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 8e-06
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-05
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 6e-05
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 8e-05
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 9e-05
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-04
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 3e-04
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 6e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  200 bits (510), Expect = 6e-61
 Identities = 58/376 (15%), Positives = 114/376 (30%), Gaps = 53/376 (14%)

Query: 35  SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY 94
           + ++  V  +   TG +   +    P     + +D   +  W+ C+           P  
Sbjct: 8   NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQYSSKTYQAPFC 65

Query: 95  RPSN----DLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNY 150
             +     +   C     AS        C                + LG L +D  A + 
Sbjct: 66  HSTQCSRANTHQCLSCPAASR-----PGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHA 120

Query: 151 TNGQRLN-------PRLALGCGYNQVPGASYHP-LDGILGLGKGKSSIVSQLHSQKLIRN 202
           T G           P+    C  + +          G+ GLG    S+ +QL S   ++ 
Sbjct: 121 TQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQR 180

Query: 203 VVGHCLSG--GGGGFLFFGDDLYDSSR---------VVWTSMSSDYTKYYSPGVAELFFG 251
               CLS      G + FGD   +  +         + +T ++      Y+  V  +   
Sbjct: 181 QFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRIN 240

Query: 252 GETTGLKNLP-----------VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPED 300
             +    N              +  + + +  L +  YQ  T +  ++L      +    
Sbjct: 241 QHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSV 298

Query: 301 ETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGIL 360
               LC+           V      L +   +G     + ++ E  ++ +  G  CLG++
Sbjct: 299 APFGLCFNS-NKINAYPSV-----DLVMDKPNGPV---WRISGEDLMVQAQPGVTCLGVM 349

Query: 361 NGAEVGLQDLNVIGGI 376
           NG     +    +G  
Sbjct: 350 NGGMQP-RAEITLGAR 364
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.96
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.83
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 98.13
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=9.4e-55  Score=428.26  Aligned_cols=329  Identities=22%  Similarity=0.363  Sum_probs=260.2

Q ss_pred             CCCeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcC
Q 016916           33 VGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLH  112 (380)
Q Consensus        33 ~~~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~  112 (380)
                      +++.+.+|++++. .+++|+++|+||||||++.|+|||||+++||+|. +|.     ....|.    .++|.++.|...+
T Consensus         5 ~~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~   73 (413)
T 3vla_A            5 RPSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSG   73 (413)
T ss_dssp             CCSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTT
T ss_pred             CCccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCcccccccc
Confidence            4677999999885 7899999999999999999999999999999988 652     122333    3899999999776


Q ss_pred             CCCCC--------CCCCCCCCceeEEe-CCCCeEEEEEEEEEEEEeecCCC-----cCCCceEEeeeEecCCCCCCCCcc
Q 016916          113 APGHH--------NCEDPAQCDYELEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYNQVPGASYHPLD  178 (380)
Q Consensus       113 ~~~~~--------~c~~~~~~~~~i~Y-~~Gs~~~G~l~~D~v~l~~~~g~-----~~~~~~~FG~~~~~~~~~~~~~~~  178 (380)
                      .+.+.        .|. ++.|.|.+.| ++|+.+.|.+++|+|+|+..+|.     ..++++.|||++.+.........+
T Consensus        74 ~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~d  152 (413)
T 3vla_A           74 SIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVV  152 (413)
T ss_dssp             CCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCC
T ss_pred             cCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccc
Confidence            54332        233 3579999999 58878999999999999865443     467889999998752111245689


Q ss_pred             eEEeeCCCCCchhhhccccccccceeeeeecC--CCceeEEECCCCC-------CCCC-cEEeecccCCC----------
Q 016916          179 GILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY-------DSSR-VVWTSMSSDYT----------  238 (380)
Q Consensus       179 GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~--~~~G~l~~G~~~~-------~~g~-l~~~pl~~~~~----------  238 (380)
                      ||||||++.+|++.||.+++.++++||+||.+  +.+|.|+||+.+.       +.++ +.|+||..++.          
T Consensus       153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~  232 (413)
T 3vla_A          153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGE  232 (413)
T ss_dssp             EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTC
T ss_pred             cccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccC
Confidence            99999999999999999998889999999985  4689999999864       3567 99999998631          


Q ss_pred             --CCeeEEeeEEEECCEEeeeC----------CCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcc
Q 016916          239 --KYYSPGVAELFFGGETTGLK----------NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLC  306 (380)
Q Consensus       239 --~~w~v~l~~i~vg~~~~~~~----------~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C  306 (380)
                        .+|+|.|++|+||++.+.++          ...+||||||++++||+++|++|.++|.+++...++++......+..|
T Consensus       233 ~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C  312 (413)
T 3vla_A          233 PSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGAC  312 (413)
T ss_dssp             CCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCE
T ss_pred             CCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcce
Confidence              59999999999999998764          368999999999999999999999999988753223333233456789


Q ss_pred             cccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCCCeEEEEEEeCCcCCCCCeeEEccccc
Q 016916          307 WKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGD  378 (380)
Q Consensus       307 ~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~~  378 (380)
                      |+......  ..++..+|+|+|+|+|+  +++|+|++++|+++..++..|++++..... ....||||++++
T Consensus       313 ~~~~~~~~--~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl  379 (413)
T 3vla_A          313 FSTDNILS--TRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQL  379 (413)
T ss_dssp             EECTTCCE--ETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHH
T ss_pred             eccCCccc--cccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhh
Confidence            98653110  01224699999999962  389999999999987667899998875421 235899999875
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 380
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 4e-35
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-19
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-19
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 5e-19
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-18
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-18
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 4e-16
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 8e-16
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 1e-15
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 1e-15
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-15
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 2e-15
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-15
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 4e-15
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 7e-15
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-14
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-14
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-14
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 5e-14
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-11
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-10
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-09
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  130 bits (328), Expect = 4e-35
 Identities = 61/359 (16%), Positives = 107/359 (29%), Gaps = 46/359 (12%)

Query: 46  YPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSN----DLV 101
             T  Y +  + G       L LD    L W  CD       E P               
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQPPAEIPCSSPTCLLANAYPAP 64

Query: 102 PCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLA 161
            C  P C S       +  D     Y      G  + G L    F  N T+G +   ++ 
Sbjct: 65  GCPAPSCGS-------DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVN 117

Query: 162 LGCGYNQVPGASYHPL----DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLF 217
           +G      P      L     G+ GL     ++ +Q+ S + + N    CL  GG G   
Sbjct: 118 VGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAI 177

Query: 218 FGDDLYDSSR----VVWTSMSS-DYTKYYSPGVAELFFGGETTGL-----KNLPVVFDSG 267
           FG       +    + +T + +   +  +      +  G     +         V+  + 
Sbjct: 178 FGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTR 237

Query: 268 SSYTYLNRVTYQTLTSIMKKELSAKSL------KEAPEDETLPLCWKGRRPFKNVHDVKK 321
             Y  L    Y+ L     K L+A+        +         +C+  +    N+     
Sbjct: 238 LPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA- 296

Query: 322 CFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGL----QDLNVIGGI 376
               + L    G     + +T +  ++   +G  C+  +    V          ++GG 
Sbjct: 297 -VPNVQLGLDGGSD---WTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGA 351
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=5.4e-45  Score=352.22  Aligned_cols=288  Identities=20%  Similarity=0.347  Sum_probs=229.6

Q ss_pred             EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCC
Q 016916           38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH  117 (380)
Q Consensus        38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~  117 (380)
                      ..||+.  +.+.+|+++|.||||||++.|+|||||+++||+|. +|..|..+.++.|+|++|+      +|+.       
T Consensus        47 ~~~l~n--~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~-~C~~~~~~~~~~yd~~~Ss------t~~~-------  110 (370)
T d3psga_          47 DEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFEA-------  110 (370)
T ss_dssp             CCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCEE-------
T ss_pred             cccccc--ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECc-cCCCcccccccccCCCccc------cccc-------
Confidence            345553  24679999999999999999999999999999999 9999988889999999884      1221       


Q ss_pred             CCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCC------Cch
Q 016916          118 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGK------SSI  190 (380)
Q Consensus       118 ~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~------~s~  190 (380)
                           ..|.|.+.|++| ++.|.++.|++.++    ...++++.|||++..... +.....+||+|||+..      ..+
T Consensus       111 -----~~~~~~~~Yg~G-s~~G~~~~d~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~  180 (370)
T d3psga_         111 -----TSQELSITYGTG-SMTGILGYDTVQVG----GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV  180 (370)
T ss_dssp             -----EEEEEEEESSSC-EEEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred             -----CCCcEEEEeCCc-eEEEEEEEEEEeee----ceeeeeeEEEEEeeccCceecccccccccccccCcccccCCCch
Confidence                 467999999999 79999999999994    567889999999876443 3346689999999864      347


Q ss_pred             hhhccccccc-cceeeeeecC--CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-CCCEEE
Q 016916          191 VSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPVVF  264 (380)
Q Consensus       191 ~~~l~~~g~i-~~~Fs~~l~~--~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~-~~~aii  264 (380)
                      +.+|.++++| +++|++|+..  ..+|.|+||+++.  ..+++.|+|+...  .+|.+.++++.++++.+... ...+||
T Consensus       181 ~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~--~~w~v~~~~i~v~g~~~~~~~~~~aii  258 (370)
T d3psga_         181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQAIV  258 (370)
T ss_dssp             HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEEEE
T ss_pred             hhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeeccc--ceEEEEEeeEEeCCeEEecCCCccEEE
Confidence            7889999999 8999999974  4679999999864  5799999999877  69999999999999877654 458999


Q ss_pred             cccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCC
Q 016916          265 DSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPE  344 (380)
Q Consensus       265 DSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~  344 (380)
                      ||||++++||+++|++|.+++.+...      . ......+|+...           .+|+|+|+|+|    ++|+|+|+
T Consensus       259 DSGTs~~~lp~~~~~~i~~~l~~~~~------~-~~~~~~~C~~~~-----------~~P~l~f~f~g----~~~~l~~~  316 (370)
T d3psga_         259 DTGTSLLTGPTSAIANIQSDIGASEN------S-DGEMVISCSSID-----------SLPDIVFTIDG----VQYPLSPS  316 (370)
T ss_dssp             CTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCEECCGGGGG-----------GCCCEEEEETT----EEEEECHH
T ss_pred             ecCCceEeCCHHHHHHHHHHhCCeee------c-CCcEEEeccccC-----------CCceEEEEECC----EEEEEChH
Confidence            99999999999999999988865332      1 122345687642           48999999975    99999999


Q ss_pred             eEEEEeCCCeEEE-EEEeCCc-CCCCCeeEEcccc
Q 016916          345 AYLIISNKGNVCL-GILNGAE-VGLQDLNVIGGIG  377 (380)
Q Consensus       345 ~y~~~~~~~~~C~-~~~~~~~-~~~~~~~IlG~~~  377 (380)
                      +|+++..+  .|+ ++..... ...++.||||+++
T Consensus       317 ~yi~~~~~--~c~~~~~~~~~~~~~~~~~ILG~~f  349 (370)
T d3psga_         317 AYILQDDD--SCTSGFEGMDVPTSSGELWILGDVF  349 (370)
T ss_dssp             HHEEECSS--CEEESEEEECCCTTSCCEEEECHHH
T ss_pred             HeEEEcCC--eEEEEEEEcccCCCCCCcEEECHHh
Confidence            99997543  354 4443221 1234689999875
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure