Citrus Sinensis ID: 016925

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHcccEEEEEEcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccHHcccccccEEEEEcccccHHHHHHHHcccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccccEEEEEccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccEcccccEEEEEEcEEEEcccccccEEHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEEcccEcHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHHHHHHHHccccccEEEcccccHHHHHcccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccHcccccEEEEEEccccHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccc
MAPYGILIWAVITAVLASILILASHVhnarrnrttsvaffhpntndggggeRVLWCAVKAIqeespdldcivytgdhdafpdSLLARAVDRFgvellhppkvVHLYRRKwieestyprftmigqsfGSVYLSWEALckftplyyfdtsgyaftyplarIFGCRVIcythyptislDMISRVregssmynnnasiaqsnwlsQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLwgipdrikrvyppcdtsglqvlplersteypaiisvaqfrpekahplQLEAFSVALRKLdadlprprlqfvgscrnksdeERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFfhpntndgggGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFgvellhppkvvhLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDAdlprprlqfvgscrnksdeerlqslkdksielkvdgnVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
***YGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV*******************IELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYL*****
MAPYGILIWAVITAVLASILILASH******NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS*LQ*****RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKS**
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC*********QSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKS**
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SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKSKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query380 2.2.26 [Sep-21-2011]
Q9XEE9463 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.926 0.760 0.742 1e-160
Q5R7Z6492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.884 0.682 0.454 2e-81
Q3TZM9492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.923 0.713 0.432 4e-81
Q2TAA5492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.884 0.682 0.451 7e-81
Q08B22486 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.815 0.637 0.471 1e-79
Q6P312487 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.823 0.642 0.468 7e-78
Q7ZW24500 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.915 0.696 0.419 1e-76
Q54DM9505 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.8 0.601 0.452 2e-72
P53993470 Uncharacterized glycosylt yes no 0.865 0.7 0.375 2e-62
Q8X092556 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.823 0.562 0.370 3e-57
>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 Back     alignment and function desciption
 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 262/353 (74%), Positives = 302/353 (85%), Gaps = 1/353 (0%)

Query: 1   MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
           MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1   MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query: 61  IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
           IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct: 60  IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
           MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
           VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
            IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299

Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIF 353
           D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR ++ + 
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELL 352
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1
>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 Back     alignment and function description
>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 Back     alignment and function description
>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 Back     alignment and function description
>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 Back     alignment and function description
>sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
224119626466 predicted protein [Populus trichocarpa] 0.915 0.746 0.770 1e-166
255574810465 glycosyl transferase, putative [Ricinus 0.915 0.748 0.764 1e-163
449460937463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.915 0.751 0.758 1e-159
225448485463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.915 0.751 0.750 1e-159
42569790463 alpha-1,2-mannosyltransferase [Arabidops 0.926 0.760 0.742 1e-158
297789912463 glycosyl transferase family 1 protein [A 0.913 0.749 0.734 1e-157
68160672463 glycosyl transferase family 1 protein [N 0.863 0.708 0.774 1e-156
356520284456 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.907 0.756 0.738 1e-155
147866333 717 hypothetical protein VITISV_005430 [Viti 0.915 0.485 0.699 1e-154
356560288460 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.857 0.708 0.757 1e-150
>gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 269/349 (77%), Positives = 313/349 (89%), Gaps = 1/349 (0%)

Query: 6   ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
           ++I++++T++L  IL + S  + N RR R  +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7   LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66

Query: 65  SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
           SPDLDC++YTGDHD+  +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67  SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126

Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
           SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+ 
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186

Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
           SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP 
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246

Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
           RIKRVYPPCDTSGLQVLPLER T  P  ISVAQFRPEKAHPLQLEAFS+A+R+LDAD+PR
Sbjct: 247 RIKRVYPPCDTSGLQVLPLERPTTTPIFISVAQFRPEKAHPLQLEAFSLAIRRLDADMPR 306

Query: 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIF 353
           P LQFVGSCRNK DE+RLQ L+DK++EL VDG+V+FYKN++YR ++ + 
Sbjct: 307 PILQFVGSCRNKFDEDRLQKLQDKAVELNVDGDVQFYKNVMYRDLVRLL 355

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] Back     alignment and taxonomy information
>gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|147866333|emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356560288|ref|XP_003548425.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query380
TAIR|locus:2065080463 LEW3 "LEAF WILTING 3" [Arabido 0.923 0.758 0.744 1.9e-145
UNIPROTKB|E1BUY5491 ALG11 "Uncharacterized protein 0.828 0.641 0.492 2.6e-79
FB|FBgn0037108475 CG11306 [Drosophila melanogast 0.931 0.745 0.442 2.7e-77
UNIPROTKB|E1B756500 ALG11 "Uncharacterized protein 0.823 0.626 0.477 2.7e-77
UNIPROTKB|E2RR35667 ALG11 "Uncharacterized protein 0.884 0.503 0.454 3.4e-77
UNIPROTKB|F1RMC7492 ALG11 "Uncharacterized protein 0.884 0.682 0.460 3.1e-76
RGD|1564725492 Alg11 "ALG11, alpha-1,2-mannos 0.9 0.695 0.436 1.7e-75
UNIPROTKB|Q2TAA5492 ALG11 "GDP-Man:Man(3)GlcNAc(2) 0.884 0.682 0.451 2.1e-75
MGI|MGI:2142632492 Alg11 "asparagine-linked glyco 0.9 0.695 0.436 2.1e-75
ZFIN|ZDB-GENE-030131-7282500 alg11 "asparagine-linked glyco 0.915 0.696 0.416 7.7e-71
TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 262/352 (74%), Positives = 302/352 (85%)

Query:     1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
             MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct:     1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query:    61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
             IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct:    60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query:   121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
             MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct:   120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query:   181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
             VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct:   180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query:   241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
              IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct:   240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299

Query:   301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTI 352
             D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR ++ +
Sbjct:   300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVEL 351
GO:0005576 "extracellular region" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=IDA
GO:0006487 "protein N-linked glycosylation" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=IMP
UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XEE9ALG11_ARATH2, ., 4, ., 1, ., 1, 3, 10.74220.92630.7602yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
PLN02949463 PLN02949, PLN02949, transferase, transferring glyc 0.0
cd03806419 cd03806, GT1_ALG11_like, This family is most close 1e-156
cd03799355 cd03799, GT1_amsK_like, This is a family of GT1 gl 3e-09
cd03801374 cd03801, GT1_YqgM_like, This family is most closel 2e-08
cd03805392 cd03805, GT1_ALG2_like, This family is most closel 4e-08
cd03809365 cd03809, GT1_mtfB_like, This family is most closel 1e-05
cd03804351 cd03804, GT1_wbaZ_like, This family is most closel 2e-05
COG0438381 COG0438, RfaG, Glycosyltransferase [Cell envelope 3e-05
cd03811353 cd03811, GT1_WabH_like, This family is most closel 5e-05
pfam00534158 pfam00534, Glycos_transf_1, Glycosyl transferases 1e-04
cd03798377 cd03798, GT1_wlbH_like, This family is most closel 4e-04
cd03808359 cd03808, GT1_cap1E_like, This family is most close 5e-04
>gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  657 bits (1697), Expect = 0.0
 Identities = 260/344 (75%), Positives = 303/344 (88%)

Query: 6   ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
           ++++ ++T+++  ++ +A  V  ARR+R  +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5   LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64

Query: 66  PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
           PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65  PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124

Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
            GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184

Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
           SMYNN+ASIA+S WLS CKI+YY  F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244

Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
           IKRVYPPCDTSGLQ LPLERS + P IISVAQFRPEKAH LQLEAF++AL KLDAD+PRP
Sbjct: 245 IKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRP 304

Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSV 349
           +LQFVGSCRNK DEERLQ LKD++ EL +DG+VEF+KN+ YR +
Sbjct: 305 KLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDL 348

Length = 463
>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 380
PLN02949463 transferase, transferring glycosyl groups 100.0
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 100.0
cd03806419 GT1_ALG11_like This family is most closely related 100.0
cd03805392 GT1_ALG2_like This family is most closely related 99.96
cd03796 398 GT1_PIG-A_like This family is most closely related 99.94
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 99.93
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 99.93
PRK10307412 putative glycosyl transferase; Provisional 99.93
PLN02871 465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 99.92
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 99.91
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 99.91
cd03818396 GT1_ExpC_like This family is most closely related 99.9
cd04962371 GT1_like_5 This family is most closely related to 99.9
cd03800398 GT1_Sucrose_synthase This family is most closely r 99.9
cd03812358 GT1_CapH_like This family is most closely related 99.9
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 99.9
cd03804351 GT1_wbaZ_like This family is most closely related 99.9
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 99.89
cd03819355 GT1_WavL_like This family is most closely related 99.89
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 99.89
cd04955363 GT1_like_6 This family is most closely related to 99.89
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 99.89
PLN023161036 synthase/transferase 99.89
cd03795357 GT1_like_4 This family is most closely related to 99.89
PRK00654466 glgA glycogen synthase; Provisional 99.88
cd03816415 GT1_ALG1_like This family is most closely related 99.88
cd03802335 GT1_AviGT4_like This family is most closely relate 99.87
cd03809365 GT1_mtfB_like This family is most closely related 99.87
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 99.87
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 99.87
TIGR02470 784 sucr_synth sucrose synthase. This model represents 99.87
cd03821375 GT1_Bme6_like This family is most closely related 99.87
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 99.87
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 99.87
KOG1111 426 consensus N-acetylglucosaminyltransferase complex, 99.86
PLN02939977 transferase, transferring glycosyl groups 99.86
cd04951360 GT1_WbdM_like This family is most closely related 99.86
PRK14098489 glycogen synthase; Provisional 99.86
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 99.86
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 99.86
cd03820348 GT1_amsD_like This family is most closely related 99.86
cd03811353 GT1_WabH_like This family is most closely related 99.85
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.85
cd03817374 GT1_UGDG_like This family is most closely related 99.85
cd03822366 GT1_ecORF704_like This family is most closely rela 99.85
cd03801374 GT1_YqgM_like This family is most closely related 99.85
PRK14099485 glycogen synthase; Provisional 99.84
cd03798377 GT1_wlbH_like This family is most closely related 99.84
cd03807365 GT1_WbnK_like This family is most closely related 99.83
PLN02275371 transferase, transferring glycosyl groups 99.83
cd03823359 GT1_ExpE7_like This family is most closely related 99.83
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 99.82
cd03813475 GT1_like_3 This family is most closely related to 99.82
PLN00142 815 sucrose synthase 99.82
PLN02846 462 digalactosyldiacylglycerol synthase 99.82
cd03794394 GT1_wbuB_like This family is most closely related 99.81
cd03808359 GT1_cap1E_like This family is most closely related 99.81
PRK10125405 putative glycosyl transferase; Provisional 99.81
cd03814364 GT1_like_2 This family is most closely related to 99.81
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 99.74
PLN02501 794 digalactosyldiacylglycerol synthase 99.73
cd03825365 GT1_wcfI_like This family is most closely related 99.71
cd04946407 GT1_AmsK_like This family is most closely related 99.69
cd04949372 GT1_gtfA_like This family is most closely related 99.67
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 99.67
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 99.65
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 99.56
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 99.55
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.55
PHA01633335 putative glycosyl transferase group 1 99.54
PHA01630331 putative group 1 glycosyl transferase 99.48
PRK13609380 diacylglycerol glucosyltransferase; Provisional 99.47
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 99.46
KOG0853 495 consensus Glycosyltransferase [Cell wall/membrane/ 99.41
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 99.4
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 99.33
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 99.3
cd03793 590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 99.28
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 99.24
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.24
PLN02605382 monogalactosyldiacylglycerol synthase 99.23
PRK13608391 diacylglycerol glucosyltransferase; Provisional 99.23
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 99.2
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 99.14
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 99.12
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 99.08
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 99.07
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 99.07
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 98.97
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 98.94
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 98.92
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 98.9
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 98.77
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 98.71
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 98.48
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 98.45
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 98.33
KOG2941444 consensus Beta-1,4-mannosyltransferase [Posttransl 98.3
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 98.26
TIGR03492396 conserved hypothetical protein. This protein famil 98.18
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 98.17
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 98.08
cd04299 778 GT1_Glycogen_Phosphorylase_like This family is mos 97.99
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 97.89
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 97.86
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 97.85
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 97.78
TIGR02919438 accessory Sec system glycosyltransferase GtfB. Mem 97.67
PRK10117474 trehalose-6-phosphate synthase; Provisional 97.38
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 97.21
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 97.13
PF05693 633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 97.07
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 97.01
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 96.96
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 96.96
COG4671400 Predicted glycosyl transferase [General function p 96.69
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 96.53
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 96.4
TIGR00661321 MJ1255 conserved hypothetical protein. This model 96.34
PRK02797322 4-alpha-L-fucosyltransferase; Provisional 95.97
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 95.92
PRK10017426 colanic acid biosynthesis protein; Provisional 95.85
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 95.51
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 95.1
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 94.13
PF07429360 Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc 93.5
PF04413186 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid 93.4
COG0763381 LpxB Lipid A disaccharide synthetase [Cell envelop 92.58
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 91.76
PRK01021608 lpxB lipid-A-disaccharide synthase; Reviewed 88.97
PF08660170 Alg14: Oligosaccharide biosynthesis protein Alg14 88.9
COG1817346 Uncharacterized protein conserved in archaea [Func 86.4
KOG3742 692 consensus Glycogen synthase [Carbohydrate transpor 83.52
PF00862550 Sucrose_synth: Sucrose synthase; InterPro: IPR0003 80.59
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information 
Probab=100.00  E-value=1.4e-53  Score=425.46  Aligned_cols=348  Identities=74%  Similarity=1.252  Sum_probs=306.5

Q ss_pred             HHhHhhhcCCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeE
Q 016925           23 ASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV  102 (380)
Q Consensus        23 ~~~~~~~~~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~  102 (380)
                      +-.++-+|++++++|+|+||+++.|||+||++|+.+.+|++.|++++|+++|+++|..+++++..+.++|+++++..+.+
T Consensus        22 ~~~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~  101 (463)
T PLN02949         22 ALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKV  101 (463)
T ss_pred             HHHHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceE
Confidence            34578899999999999999999999999999999999999998889999999988777777777777899988877788


Q ss_pred             EEeccccccccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHHHHhHhCCcEEEEEeCCcchhhHHHhhh
Q 016925          103 VHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVR  182 (380)
Q Consensus       103 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~l~~~~~~p~v~~~H~p~~~~~~~~~~~  182 (380)
                      ++++.+.+++++.|++++++++.++.++++++++.+..||+++|+.++++++|+++..++|+++|||+|+.+.||+..++
T Consensus       102 v~l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~  181 (463)
T PLN02949        102 VHLRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVR  181 (463)
T ss_pred             EEeccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHh
Confidence            88877789999999999999999999999999888888999999999999999888778999999999999999999999


Q ss_pred             ccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCC
Q 016925          183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP  262 (380)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~  262 (380)
                      ++...|++.++++.+.+....|.+|++.+.++++...+.||.|+|||+++++.+++.++.+.++.++|||+|.+.+...+
T Consensus       182 ~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~  261 (463)
T PLN02949        182 DRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALP  261 (463)
T ss_pred             hcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCC
Confidence            99999999888888777788899999999999999999999999999999999999887656788999999976553322


Q ss_pred             CCCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEcc
Q 016925          263 LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK  342 (380)
Q Consensus       263 ~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G  342 (380)
                      .....++++++++||++|+||++.+|+||+.+.++..+..|+++|+|+|+++..++.++.++|+++++++|++++|+|+|
T Consensus       262 ~~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g  341 (463)
T PLN02949        262 LERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHK  341 (463)
T ss_pred             ccccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeC
Confidence            22223457999999999999999999999998764322347899999999866566778899999999999999999999


Q ss_pred             CCCHHHHHHHHhhccEEEe-echhhHHHH
Q 016925          343 NLLYRSVLTIFMHLFVFTM-KWQLVYDEF  370 (380)
Q Consensus       343 ~v~~~el~~ly~~a~vf~~-~~~~~~~~~  370 (380)
                      +++++++.++|++|++++. +|.|+||-=
T Consensus       342 ~v~~~el~~ll~~a~~~v~~s~~E~FGiv  370 (463)
T PLN02949        342 NVSYRDLVRLLGGAVAGLHSMIDEHFGIS  370 (463)
T ss_pred             CCCHHHHHHHHHhCcEEEeCCccCCCChH
Confidence            9999999999999999986 689999953

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>TIGR02919 accessory Sec system glycosyltransferase GtfB Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>PRK02797 4-alpha-L-fucosyltransferase; Provisional Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) Back     alignment and domain information
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides Back     alignment and domain information
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] Back     alignment and domain information
>COG1817 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query380
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 2e-06
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 3e-06
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 4e-05
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 4e-04
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 6e-04
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 Back     alignment and structure
 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 22/168 (13%)

Query: 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP------ 251
           +                  +   AD+  VN+      +   +   PDRI  V P      
Sbjct: 162 YRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVEL 221

Query: 252 --PCDTSGLQVLP--LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL 307
             P +    +     L        +  V + +P K   + ++A       L    P   L
Sbjct: 222 YSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAV----AALFDRDPDRNL 277

Query: 308 QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL-------LYRS 348
           + +             + +  + EL V+  + F           +YR+
Sbjct: 278 RVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRA 325
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 99.94
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 99.94
2r60_A 499 Glycosyl transferase, group 1; rossmann-fold; 1.80 99.94
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 99.93
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 99.92
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 99.91
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 99.91
3oy2_A 413 Glycosyltransferase B736L; rossmann fold, GDP-mann 99.91
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 99.91
3s28_A 816 Sucrose synthase 1; glycosyltransferase, sucrose m 99.9
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 99.9
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 99.89
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 99.89
3vue_A 536 GBSS-I, granule-bound starch synthase 1, chloropla 99.85
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.82
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 99.79
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 99.76
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 99.72
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 99.66
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.59
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 99.55
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 99.53
1uqt_A 482 Alpha, alpha-trehalose-phosphate synthase; glycosy 99.5
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 99.42
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 99.34
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 99.3
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 99.29
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 99.28
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.18
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.13
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.11
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 99.05
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.04
2iyf_A 430 OLED, oleandomycin glycosyltransferase; antibiotic 98.71
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 98.57
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 98.55
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 98.53
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 98.41
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 98.35
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 98.3
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 98.11
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 97.88
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 97.8
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 97.76
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 97.51
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 97.23
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 96.53
2c4m_A 796 Glycogen phosphorylase; allosteric control, phosph 95.8
1l5w_A 796 Maltodextrin phosphorylase; enzymatic catalysis, s 95.76
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 95.7
2gj4_A 824 Glycogen phosphorylase, muscle form; transferase; 94.85
3tov_A349 Glycosyl transferase family 9; structural genomics 92.16
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 89.85
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 84.6
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 81.56
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
Probab=99.94  E-value=2.8e-25  Score=219.04  Aligned_cols=298  Identities=13%  Similarity=0.130  Sum_probs=187.8

Q ss_pred             CCCCcEEEEECCCCC--------CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeE
Q 016925           31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV  102 (380)
Q Consensus        31 ~~~~~~I~~~~p~~~--------~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~  102 (380)
                      ..++|||+++.+.+.        ..||+++++.+++++|+++|  |+|+++|........    .     -....+++++
T Consensus        17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~----~-----~~~~~~~v~v   85 (438)
T 3c48_A           17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQG----E-----IVRVAENLRV   85 (438)
T ss_dssp             --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGGC----S-----EEEEETTEEE
T ss_pred             CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCCCCc----c-----cccccCCeEE
Confidence            467899999986542        24899999999999999998  777777744211000    0     0012234455


Q ss_pred             EEeccccccccCCCCccceehhhHhHHH-HHHHH-HHhc-CCcEEEeCCCchhhHH--HHhHhCCcEEEEEeCCcchhhH
Q 016925          103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM  177 (380)
Q Consensus       103 v~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~~~-~pDi~~~~~~~~~~~~--l~~~~~~p~v~~~H~p~~~~~~  177 (380)
                      +.++....   ..++.... ...+..+. ...+. +++. +||+++.+........  +++..++|+|.++|......  
T Consensus        86 ~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--  159 (438)
T 3c48_A           86 INIAAGPY---EGLSKEEL-PTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--  159 (438)
T ss_dssp             EEECCSCS---SSCCGGGG-GGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH--
T ss_pred             EEecCCCc---cccchhHH-HHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc--
Confidence            55543211   00111011 11111111 01122 3333 4998764432221111  23456899999999643110  


Q ss_pred             HHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCCCCC
Q 016925          178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS  256 (380)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gvd~~  256 (380)
                           ..   +     ....   ....   +.....+++.+.+.+|.++++|+.+++.+.+.++. ..++.+|+||+|.+
T Consensus       160 -----~~---~-----~~~~---~~~~---~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~  220 (438)
T 3c48_A          160 -----NS---Y-----RDDS---DTPE---SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE  220 (438)
T ss_dssp             -----SC---C------------CCHH---HHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred             -----cc---c-----cccc---CCcc---hHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence                 00   0     0000   0000   11122345667789999999999999999987775 46899999999987


Q ss_pred             CCCCCCCCC----------CCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCC--CCeEEEEcCCCCCCCHHHHHH
Q 016925          257 GLQVLPLER----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLP--RPRLQFVGSCRNKSDEERLQS  324 (380)
Q Consensus       257 ~~~~~~~~~----------~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~--~~~LvIvG~g~~~~~~~~~~~  324 (380)
                      .+.+.+...          ..++++++++||+.++||++.+++|++.+.++.    |  +++|+|+|+...  ++++.++
T Consensus       221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----p~~~~~l~i~G~~~~--~g~~~~~  294 (438)
T 3c48_A          221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRD----PDRNLRVIICGGPSG--PNATPDT  294 (438)
T ss_dssp             TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHC----TTCSEEEEEECCBC--------CH
T ss_pred             ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhC----CCcceEEEEEeCCCC--CCcHHHH
Confidence            776532111          124678999999999999999999999998764    5  899999998311  1235678


Q ss_pred             HHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-echhhHHHH
Q 016925          325 LKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEF  370 (380)
Q Consensus       325 L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~  370 (380)
                      ++++++++|++++|.|+|+++++++.++|+.||++++ ++.|.||-=
T Consensus       295 l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~  341 (438)
T 3c48_A          295 YRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLV  341 (438)
T ss_dssp             HHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHH
T ss_pred             HHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchH
Confidence            9999999999999999999999999999999999987 567888743
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query380
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 99.84
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.8
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 99.8
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 99.35
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.18
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 99.18
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 96.07
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 95.74
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 94.6
d1v4va_373 UDP-N-acetylglucosamine 2-epimerase {Thermus therm 92.84
d1o6ca_377 UDP-N-acetylglucosamine 2-epimerase {Bacillus subt 89.58
d1f6da_376 UDP-N-acetylglucosamine 2-epimerase {Escherichia c 87.15
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=9.5e-20  Score=171.06  Aligned_cols=139  Identities=15%  Similarity=0.122  Sum_probs=111.6

Q ss_pred             cCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCCCCCCCCCC--CCC---------CCCCCCEEEEEecCCCccChHHH
Q 016925          220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL--PLE---------RSTEYPAIISVAQFRPEKAHPLQ  287 (380)
Q Consensus       220 ~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gvd~~~~~~~--~~~---------~~~~~~~il~VGRl~p~K~~d~l  287 (380)
                      ..++.+++.|+...+++.+.++. .+++.+++||+|++.+.+.  +..         ...++++++++||+.++||++.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~l  213 (370)
T d2iw1a1         134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRS  213 (370)
T ss_dssp             TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHH
T ss_pred             ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhh
Confidence            46789999999999988887776 4678999999987654321  110         11356899999999999999999


Q ss_pred             HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-echhh
Q 016925          288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQLV  366 (380)
Q Consensus       288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~  366 (380)
                      ++|++.+.++.    ++..+.++|++..      .++++++++++++.++|+|+|+.+  |+.++|++||+|++ ++.|.
T Consensus       214 i~a~~~l~~~~----~~~~~~ii~g~~~------~~~~~~~~~~~~~~~~v~~~g~~~--~~~~~~~~adv~v~ps~~E~  281 (370)
T d2iw1a1         214 IEALASLPESL----RHNTLLFVVGQDK------PRKFEALAEKLGVRSNVHFFSGRN--DVSELMAAADLLLHPAYQEA  281 (370)
T ss_dssp             HHHHHTSCHHH----HHTEEEEEESSSC------CHHHHHHHHHHTCGGGEEEESCCS--CHHHHHHHCSEEEECCSCCS
T ss_pred             ccccccccccc----ccceeeecccccc------cccccccccccccccccccccccc--cccccccccccccccccccc
Confidence            99999998765    7788877776532      156889999999999999999864  79999999999997 47788


Q ss_pred             HHHH
Q 016925          367 YDEF  370 (380)
Q Consensus       367 ~~~~  370 (380)
                      ||-=
T Consensus       282 ~~~~  285 (370)
T d2iw1a1         282 AGIV  285 (370)
T ss_dssp             SCHH
T ss_pred             ccce
Confidence            8743
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure