Citrus Sinensis ID: 016948
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 380 | 2.2.26 [Sep-21-2011] | |||||||
| P0C870 | 316 | JmjC domain-containing pr | yes | no | 0.784 | 0.943 | 0.390 | 5e-55 | |
| P0C872 | 316 | JmjC domain-containing pr | yes | no | 0.755 | 0.908 | 0.396 | 7e-54 | |
| Q54CS7 | 353 | JmjC domain-containing pr | yes | no | 0.776 | 0.835 | 0.364 | 1e-42 | |
| Q55DF5 | 448 | JmjC domain-containing pr | no | no | 0.644 | 0.546 | 0.234 | 3e-09 | |
| A2RUC4 | 315 | tRNA wybutosine-synthesiz | no | no | 0.571 | 0.688 | 0.218 | 1e-07 | |
| E1C7T6 | 318 | tRNA wybutosine-synthesiz | no | no | 0.581 | 0.694 | 0.241 | 5e-07 | |
| Q6AXL5 | 449 | HSPB1-associated protein | no | no | 0.302 | 0.256 | 0.261 | 7e-07 | |
| B5XF11 | 404 | Lysine-specific demethyla | N/A | no | 0.544 | 0.512 | 0.215 | 2e-06 | |
| P59723 | 344 | Hypoxia-inducible factor | no | no | 0.292 | 0.322 | 0.283 | 1e-05 | |
| Q54FG7 | 474 | JmjC domain-containing pr | no | no | 0.313 | 0.251 | 0.246 | 1e-05 |
| >sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 179/328 (54%), Gaps = 30/328 (9%)
Query: 3 EVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLW 62
E+++ REL + + L+ PPTPL F RD+V N+PCII+N H WPA W
Sbjct: 12 ELREFPAAARELCV--PLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH--WPALQKW 67
Query: 63 PHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQL 122
P Y T+ S+ VSV ++P+G AD++ F RLP L +
Sbjct: 68 SLP-YFRATVGSTE-VSVAVTPDGYADAVR----------GDRFMMPAERRLPLSFVLDV 115
Query: 123 VSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSET 182
+ V Y+Q+Q E L D + H+ WA+EALG P+AVN W+G + T
Sbjct: 116 LEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVT 175
Query: 183 SFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPV 242
S HKDHYENLY VVSG+KHFL PP+D + Y A Y ++ + F + EE +
Sbjct: 176 SLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATY---QLTEEGTFKVVDEEAM 232
Query: 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDD 302
VPW ++P ++A++P Y + CTV AGE+LYLP++WFHHV+QS
Sbjct: 233 EKVPWIPLDPL------APDLARYPSYSQA-QALRCTVRAGEMLYLPALWFHHVQQSQG- 284
Query: 303 NGYTIALNYWYDMQFDIKYAYFNFLQSL 330
IA+N+WYDM++D+KY+YF L SL
Sbjct: 285 ---CIAVNFWYDMEYDLKYSYFQLLDSL 309
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Homo sapiens (taxid: 9606) |
| >sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54CS7|JMJCE_DICDI JmjC domain-containing protein E OS=Dictyostelium discoideum GN=jcdE PE=4 SV=2 | Back alignment and function description |
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| >sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum GN=jcdD PE=4 SV=1 | Back alignment and function description |
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| >sp|A2RUC4|TYW5_HUMAN tRNA wybutosine-synthesizing protein 5 OS=Homo sapiens GN=TYW5 PE=1 SV=1 | Back alignment and function description |
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| >sp|E1C7T6|TYW5_CHICK tRNA wybutosine-synthesizing protein 5 OS=Gallus gallus GN=TYW5 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6AXL5|HBAP1_DANRE HSPB1-associated protein 1 homolog OS=Danio rerio GN=hspbap1 PE=2 SV=2 | Back alignment and function description |
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| >sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 | Back alignment and function description |
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| >sp|P59723|HIF1N_DANRE Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an PE=2 SV=2 | Back alignment and function description |
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| >sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum GN=jcdF PE=4 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 380 | ||||||
| 359474719 | 374 | PREDICTED: jmjC domain-containing protei | 0.957 | 0.973 | 0.635 | 1e-137 | |
| 255585385 | 361 | pla2g4b, putative [Ricinus communis] gi| | 0.928 | 0.977 | 0.678 | 1e-134 | |
| 224104511 | 367 | predicted protein [Populus trichocarpa] | 0.95 | 0.983 | 0.676 | 1e-132 | |
| 224121118 | 364 | predicted protein [Populus trichocarpa] | 0.931 | 0.972 | 0.683 | 1e-131 | |
| 356540902 | 349 | PREDICTED: jmjC domain-containing protei | 0.842 | 0.916 | 0.685 | 1e-130 | |
| 357484337 | 351 | JmjC domain-containing protein [Medicago | 0.876 | 0.948 | 0.665 | 1e-128 | |
| 297819114 | 345 | hypothetical protein ARALYDRAFT_484968 [ | 0.818 | 0.901 | 0.673 | 1e-124 | |
| 7339489 | 431 | phospholipase-like protein [Arabidopsis | 0.876 | 0.772 | 0.637 | 1e-123 | |
| 145339161 | 345 | phospholipase - like protein [Arabidopsi | 0.878 | 0.968 | 0.636 | 1e-123 | |
| 147860088 | 324 | hypothetical protein VITISV_025046 [Viti | 0.739 | 0.867 | 0.673 | 1e-109 |
| >gi|359474719|ref|XP_002268332.2| PREDICTED: jmjC domain-containing protein 7-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/379 (63%), Positives = 290/379 (76%), Gaps = 15/379 (3%)
Query: 3 EVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLW 62
+V+ LW+EVRELSLG + +ERLESPPTPL+FLR++VS NKPC+I N +LH WPA S W
Sbjct: 6 QVETLWEEVRELSLGKSGRVERLESPPTPLRFLREFVSPNKPCLISNATLH--WPALSSW 63
Query: 63 PHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQL 122
H YLS+ LS+ VS+HL+PNGRAD+LV P + S CFAS +V RL F EAL+L
Sbjct: 64 SHDDYLSRALSNDV-VSLHLTPNGRADALVPA--PSTSSSSLCFASPYVHRLLFPEALRL 120
Query: 123 V---SNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQL 179
+ N+ + VAY QQQNDCFR EYS L +DC+ HI WA++ALGC PEAVNLWIGN L
Sbjct: 121 ILSCGNANSSGTVAYAQQQNDCFRSEYSALAADCEPHIPWASQALGCLPEAVNLWIGNHL 180
Query: 180 SETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELE 239
SETSFHKDHYENLY VV GQKHFLLLPPTDVHRMYIRQYPAAHYS+S+ D + LEL+
Sbjct: 181 SETSFHKDHYENLYAVVCGQKHFLLLPPTDVHRMYIRQYPAAHYSFSQ--DSGQLKLELD 238
Query: 240 EPVRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQS 299
P R VPWCSVNPYPSPET+++E+++FPLYFNGPKP ECTV AGEILYLPSMWFHHV+Q+
Sbjct: 239 NPARNVPWCSVNPYPSPETKDAEISQFPLYFNGPKPLECTVKAGEILYLPSMWFHHVKQT 298
Query: 300 PDDNGYTIALNYWYDMQFDIKYAYFNFLQSLHFKAPCDPTLLEIDYEDSRPNASICNSRE 359
PD +G TIA+NYWYDMQFDIKYAYFNFLQS+ + + C+ L + EDS + C S+
Sbjct: 299 PDSSGRTIAINYWYDMQFDIKYAYFNFLQSISYPSTCNLKLAGTECEDSGSDVCACLSKY 358
Query: 360 KLFADASSLNELETTKDSE 378
AD ++ +KD E
Sbjct: 359 APVADV-----VKMSKDGE 372
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585385|ref|XP_002533388.1| pla2g4b, putative [Ricinus communis] gi|223526762|gb|EEF28988.1| pla2g4b, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224104511|ref|XP_002313461.1| predicted protein [Populus trichocarpa] gi|222849869|gb|EEE87416.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224121118|ref|XP_002330908.1| predicted protein [Populus trichocarpa] gi|222872730|gb|EEF09861.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356540902|ref|XP_003538923.1| PREDICTED: jmjC domain-containing protein 7-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357484337|ref|XP_003612456.1| JmjC domain-containing protein [Medicago truncatula] gi|355513791|gb|AES95414.1| JmjC domain-containing protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297819114|ref|XP_002877440.1| hypothetical protein ARALYDRAFT_484968 [Arabidopsis lyrata subsp. lyrata] gi|297323278|gb|EFH53699.1| hypothetical protein ARALYDRAFT_484968 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|7339489|emb|CAB82812.1| phospholipase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|145339161|ref|NP_190174.2| phospholipase - like protein [Arabidopsis thaliana] gi|110741676|dbj|BAE98784.1| phospholipase - like protein [Arabidopsis thaliana] gi|332644565|gb|AEE78086.1| phospholipase - like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|147860088|emb|CAN82929.1| hypothetical protein VITISV_025046 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 380 | ||||||
| TAIR|locus:2077172 | 345 | AT3G45880 [Arabidopsis thalian | 0.876 | 0.965 | 0.617 | 9.4e-114 | |
| ZFIN|ZDB-GENE-050417-86 | 311 | jmjd7 "jumonji domain containi | 0.789 | 0.964 | 0.410 | 8.6e-56 | |
| DICTYBASE|DDB_G0292770 | 353 | jcdE "transcription factor jum | 0.813 | 0.875 | 0.356 | 2.2e-43 | |
| FB|FBgn0036366 | 316 | CG10133 [Drosophila melanogast | 0.8 | 0.962 | 0.336 | 2e-40 | |
| UNIPROTKB|E1BWG9 | 1028 | E1BWG9 "Uncharacterized protei | 0.518 | 0.191 | 0.383 | 4.4e-30 | |
| GENEDB_PFALCIPARUM|PF11_0230 | 446 | PF11_0230 "hypothetical protei | 0.105 | 0.089 | 0.475 | 4.4e-11 | |
| UNIPROTKB|Q8IIE4 | 446 | PF11_0230 "Conserved Plasmodiu | 0.105 | 0.089 | 0.475 | 4.4e-11 | |
| POMBASE|SPCC622.19 | 473 | jmj4 "Jmj4 protein (predicted) | 0.465 | 0.374 | 0.245 | 4.9e-09 | |
| DICTYBASE|DDB_G0270906 | 448 | jcdD "transcription factor jum | 0.142 | 0.120 | 0.327 | 1.3e-08 | |
| CGD|CAL0002634 | 530 | orf19.1961 [Candida albicans ( | 0.097 | 0.069 | 0.476 | 1.6e-07 |
| TAIR|locus:2077172 AT3G45880 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 215/348 (61%), Positives = 255/348 (73%)
Query: 2 QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
+E++ LW EVRELSLG+ I+R +S P+P++FLR+YVSQ+KPC+I H WPA L
Sbjct: 3 KEIENLWREVRELSLGTK--IDRFDSQPSPVKFLRNYVSQSKPCVISKAITH--WPALKL 58
Query: 62 WPHPSYLSKTXXXXXXXXXXXXXNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
W P+YL+ NG AD++ +G+ CFASAHVE++ F EAL+
Sbjct: 59 WSDPAYLTGALSDDVVSLHLTP-NGCADAV-------TGDSDLCFASAHVEKVLFPEALK 110
Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
+V +S G V YLQQQNDCFR EYS + DCD I WATEA GC PEAVNLWIG S
Sbjct: 111 VVQSSCKGLKVGYLQQQNDCFRTEYSTVALDCDGDIEWATEAFGCSPEAVNLWIGTDDSV 170
Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEP 241
TSFHKDHYENLY VVSG+KHFLLLPPTDVHR+YI QYPAA+YSY R D + F LE+EEP
Sbjct: 171 TSFHKDHYENLYAVVSGEKHFLLLPPTDVHRLYIEQYPAANYSYHR--DTDAFKLEVEEP 228
Query: 242 VRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301
VR+VPW SV+PYPSPE SE KFPL+F+GPKPF CTV AGE+LYLPSMWFHHV Q+P
Sbjct: 229 VRHVPWSSVDPYPSPEKEASERLKFPLFFDGPKPFHCTVKAGEVLYLPSMWFHHVSQTPG 288
Query: 302 DNGYTIALNYWYDMQFDIKYAYFNFLQSLHFKAPC-DPTLLEIDYEDS 348
D GYTIA+NYWYDMQFDIKYAYFNFLQSL +K+ +P L + EDS
Sbjct: 289 DGGYTIAVNYWYDMQFDIKYAYFNFLQSLLYKSSSLNPVLSWREDEDS 336
|
|
| ZFIN|ZDB-GENE-050417-86 jmjd7 "jumonji domain containing 7" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0292770 jcdE "transcription factor jumonji, jmjC domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| FB|FBgn0036366 CG10133 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BWG9 E1BWG9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| GENEDB_PFALCIPARUM|PF11_0230 PF11_0230 "hypothetical protein" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8IIE4 PF11_0230 "Conserved Plasmodium protein" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| POMBASE|SPCC622.19 jmj4 "Jmj4 protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0270906 jcdD "transcription factor jumonji, jmjC domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0002634 orf19.1961 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 380 | |||
| pfam13621 | 247 | pfam13621, Cupin_8, Cupin-like domain | 2e-72 |
| >gnl|CDD|222269 pfam13621, Cupin_8, Cupin-like domain | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 2e-72
Identities = 92/290 (31%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 31 PLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLW-PHPSYLSKTLSSSPPVSVHLSPNGRAD 89
P +F R+YV++ KP ++K + WPA W YL + VSV ++P GRAD
Sbjct: 1 PEEFFREYVAKRKPVVLKGAAKD--WPAVKKWTDALDYLKEKYGDVE-VSVEVTPPGRAD 57
Query: 90 SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVL 149
+ ER+PF + L L+ + + YL Q+ E+
Sbjct: 58 RFFYND-------DLSGVNFKEERMPFKDFLDLLRAGSDQETPPYLYLQSSNLDSEFP-- 108
Query: 150 GSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209
G D + A EA G P+AVNLWIGN + TS H D YENLY VVSG+K F L PP+
Sbjct: 109 GLREDNDLPLAPEAFGKLPQAVNLWIGNGGTTTSLHYDAYENLYCVVSGRKRFTLFPPSQ 168
Query: 210 VHRMYIRQ-YPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPETRESEMAKFPL 268
V +Y +S V D + LE KFP
Sbjct: 169 VPNLYPGPLDRTGGQPFSLV-DPDNPDLE---------------------------KFPR 200
Query: 269 YFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQFD 318
+ + + G+ LY+P+ W+HHVR + + IA+NYW+D FD
Sbjct: 201 FKDAK-ALVAELEPGDALYIPAGWWHHVRSL---DDFNIAVNYWFDPPFD 246
|
This cupin like domain shares similarity to the JmjC domain. Length = 247 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 380 | |||
| KOG2508 | 437 | consensus Predicted phospholipase [Lipid transport | 100.0 | |
| PF13621 | 251 | Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU | 100.0 | |
| KOG2130 | 407 | consensus Phosphatidylserine-specific receptor Ptd | 100.0 | |
| KOG2132 | 355 | consensus Uncharacterized conserved protein, conta | 99.97 | |
| KOG2131 | 427 | consensus Uncharacterized conserved protein, conta | 99.86 | |
| COG2850 | 383 | Uncharacterized conserved protein [Function unknow | 99.57 | |
| PF08007 | 319 | Cupin_4: Cupin superfamily protein; InterPro: IPR0 | 99.51 | |
| KOG3706 | 629 | consensus Uncharacterized conserved protein [Funct | 99.38 | |
| PF02373 | 114 | JmjC: JmjC domain, hydroxylase; InterPro: IPR01312 | 99.23 | |
| KOG1633 | 776 | consensus F-box protein JEMMA and related proteins | 98.48 | |
| KOG1356 | 889 | consensus Putative transcription factor 5qNCA, con | 98.05 | |
| KOG2132 | 355 | consensus Uncharacterized conserved protein, conta | 97.46 | |
| COG2140 | 209 | Thermophilic glucose-6-phosphate isomerase and rel | 97.29 | |
| smart00558 | 57 | JmjC A domain family that is part of the cupin met | 96.59 | |
| PF00190 | 144 | Cupin_1: Cupin; InterPro: IPR006045 This family re | 96.26 | |
| PF07883 | 71 | Cupin_2: Cupin domain; InterPro: IPR013096 This fa | 95.57 | |
| PRK04190 | 191 | glucose-6-phosphate isomerase; Provisional | 95.52 | |
| TIGR03037 | 159 | anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase | 95.32 | |
| PF06560 | 182 | GPI: Glucose-6-phosphate isomerase (GPI); InterPro | 95.21 | |
| TIGR03404 | 367 | bicupin_oxalic bicupin, oxalate decarboxylase fami | 95.13 | |
| PRK13264 | 177 | 3-hydroxyanthranilate 3,4-dioxygenase; Provisional | 94.78 | |
| COG1917 | 131 | Uncharacterized conserved protein, contains double | 93.95 | |
| smart00835 | 146 | Cupin_1 Cupin. This family represents the conserve | 92.89 | |
| KOG2508 | 437 | consensus Predicted phospholipase [Lipid transport | 92.56 | |
| TIGR03404 | 367 | bicupin_oxalic bicupin, oxalate decarboxylase fami | 92.54 | |
| COG4101 | 142 | Predicted mannose-6-phosphate isomerase [Carbohydr | 92.44 | |
| COG0662 | 127 | {ManC} Mannose-6-phosphate isomerase [Carbohydrate | 92.04 | |
| PF02041 | 167 | Auxin_BP: Auxin binding protein; InterPro: IPR0005 | 91.94 | |
| TIGR02272 | 335 | gentisate_1_2 gentisate 1,2-dioxygenase. This fami | 91.32 | |
| PF06052 | 151 | 3-HAO: 3-hydroxyanthranilic acid dioxygenase; Inte | 90.88 | |
| COG1898 | 173 | RfbC dTDP-4-dehydrorhamnose 3,5-epimerase and rela | 89.9 | |
| TIGR01221 | 176 | rmlC dTDP-4-dehydrorhamnose 3,5-epimerase. This en | 88.67 | |
| PF00908 | 176 | dTDP_sugar_isom: dTDP-4-dehydrorhamnose 3,5-epimer | 85.27 | |
| PF05523 | 131 | FdtA: WxcM-like, C-terminal ; InterPro: IPR008894 | 84.1 | |
| PF05899 | 74 | Cupin_3: Protein of unknown function (DUF861); Int | 83.14 | |
| PF13759 | 101 | 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB | 81.67 | |
| PRK13290 | 125 | ectC L-ectoine synthase; Reviewed | 80.09 |
| >KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-54 Score=402.38 Aligned_cols=320 Identities=41% Similarity=0.691 Sum_probs=289.4
Q ss_pred hHHHHHHHHhhhccCCCCCcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEE
Q 016948 2 QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVH 81 (380)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~ 81 (380)
+|++.|++++|||.+|. .|.+++..||+.+|.++|+.+++||||+.++.+ |||+++|+.++||.+.+|+. .|.|.
T Consensus 6 ~e~~~llre~relcvp~--~v~~lD~~Ptpl~Fyr~fvs~n~PvIIrkAL~h--Wpal~lWs~p~Yl~~algd~-vvsva 80 (437)
T KOG2508|consen 6 TEYKGLLREVRELCVPV--LVNLLDLTPTPLDFYRKFVSTNTPVIIRKALPH--WPALKLWSQPDYLLSALGDI-VVSVA 80 (437)
T ss_pred HHHHhhhHHHhhccccc--ccccccCCCchHHHHHhhhcCCCcEEEeccccc--CchhhccCchHHHHHhccCe-EEEEE
Confidence 46888999999999999 999999889999999999999999999999999 99999999988999999999 99999
Q ss_pred ecCCCCcc-cccccCCCCCCcccccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccc-cchh
Q 016948 82 LSPNGRAD-SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDE-HIAW 159 (380)
Q Consensus 82 ~~~~~~~d-~~~~~~~~~~g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~-~ip~ 159 (380)
++|+|.+| ++.. | ...|..+..++|++++-+..+.....+....|++++|++++.++|++..|+.- +++|
T Consensus 81 itPngyadgav~~------g--~e~f~~pae~KlklsevL~vl~~~~~~~~Vly~qkQ~snl~~elp~la~Dl~~~d~~w 152 (437)
T KOG2508|consen 81 ITPNGYADGAVMS------G--NEMFIKPAEQKLKLSEVLYVLTQYDESNEVLYGQKQNSNLVKELPPLATDLLLTDFSW 152 (437)
T ss_pred eCCCCcccccccc------C--cceeechhhhhccchhhheehhcccCCCceeehhhhcccccccccccccccccccccc
Confidence 99999887 3221 1 24555666679999999999998888889999999999999999999999985 8999
Q ss_pred hhhhhCCCCCceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeee--
Q 016948 160 ATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLE-- 237 (380)
Q Consensus 160 ~~~~~~~~~~~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~-- 237 (380)
+.++||+.|..+|||||...++|++|.|+|+|++|+|+|.|+|+|+||.+.++|+..-||.+.|++++ +.+.|+++
T Consensus 153 a~eafgk~PdavNlWiG~~~avTSlHkDhyENlYaViSGeKhFvlipP~d~~~lp~eiyp~g~ysy~~--e~g~fk~e~~ 230 (437)
T KOG2508|consen 153 APEAFGKVPDAVNLWIGKSEAVTSLHKDHYENLYAVISGEKHFVLIPPDDANQLPLEIYPNGLYSYEG--EDGPFKSEGL 230 (437)
T ss_pred cHHHhCCChhheeeeecccccccccccccccceEEEEeccceEEEeCcccccccceeecCCcceeeec--CCCceeeccc
Confidence 99999999999999999999999999999999999999999999999999999998889999998863 67888887
Q ss_pred ecCCccccc-ccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 238 LEEPVRYVP-WCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 238 ~d~p~~~~~-~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
.+++...+. |+.+||++|+...+.+..++|.+..+..+..+.+.+|+++|.|..|+|+|.....+.+-.|+||+|++++
T Consensus 231 dEe~~~~a~~~~svd~~~s~~~~a~~~~k~~l~~~~~k~~~~rv~a~~i~~lp~~w~h~~sq~~gd~~~~Iavn~~~d~~ 310 (437)
T KOG2508|consen 231 DEEDAAIAKTWFSVDPIGSPKELAVPQEKIPLLEAEYKPEMDRVLAGQILYLPEDWFHHVSQVGGDPESDIAVNEWYDIE 310 (437)
T ss_pred chhhhhhcceeeeecccCCHHHhccchhhCccccccccceeeeeeccccccChhhhhhhccccCCCccceeEEeeecccc
Confidence 556655554 9999999999888889999999987788999999999999999999999999977678899999999999
Q ss_pred CChhhHHHHHHHHhcccCCC
Q 016948 317 FDIKYAYFNFLQSLHFKAPC 336 (380)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~ 336 (380)
+|.+|+|+++|+.+-.+...
T Consensus 311 ~ds~~~~~~~L~d~~tk~S~ 330 (437)
T KOG2508|consen 311 ADSLYDYKPELPDHFTKVSV 330 (437)
T ss_pred ccccchhHHHHHHHhhhhhc
Confidence 99999999999988766533
|
|
| >PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A | Back alignment and domain information |
|---|
| >KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors | Back alignment and domain information |
|---|
| >KOG3706 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [] | Back alignment and domain information |
|---|
| >KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription] | Back alignment and domain information |
|---|
| >KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily | Back alignment and domain information |
|---|
| >PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel) | Back alignment and domain information |
|---|
| >PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) | Back alignment and domain information |
|---|
| >PRK04190 glucose-6-phosphate isomerase; Provisional | Back alignment and domain information |
|---|
| >TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase | Back alignment and domain information |
|---|
| >PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5 | Back alignment and domain information |
|---|
| >TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family | Back alignment and domain information |
|---|
| >PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional | Back alignment and domain information |
|---|
| >COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] | Back alignment and domain information |
|---|
| >smart00835 Cupin_1 Cupin | Back alignment and domain information |
|---|
| >KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family | Back alignment and domain information |
|---|
| >COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02041 Auxin_BP: Auxin binding protein; InterPro: IPR000526 Auxin binding protein is located in the lumen of the endoplasmic reticulum (ER) | Back alignment and domain information |
|---|
| >TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase | Back alignment and domain information |
|---|
| >PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1 | Back alignment and domain information |
|---|
| >COG1898 RfbC dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR01221 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase | Back alignment and domain information |
|---|
| >PF00908 dTDP_sugar_isom: dTDP-4-dehydrorhamnose 3,5-epimerase; InterPro: IPR000888 Deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-d-hexulose 3, 5-epimerase (RmlC, 5 | Back alignment and domain information |
|---|
| >PF05523 FdtA: WxcM-like, C-terminal ; InterPro: IPR008894 This entry includes FdtA (Q6T1W8 from SWISSPROT) from Aneurinibacillus thermoaerophilus, which has been characterised as a dTDP-6-deoxy-3,4-keto-hexulose isomerase [] | Back alignment and domain information |
|---|
| >PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown | Back alignment and domain information |
|---|
| >PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A | Back alignment and domain information |
|---|
| >PRK13290 ectC L-ectoine synthase; Reviewed | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 380 | ||||
| 3al5_A | 338 | Crystal Structure Of Human Tyw5 Length = 338 | 1e-06 | ||
| 1iz3_A | 349 | Dimeric Structure Of Fih (Factor Inhibiting Hif) Le | 3e-06 | ||
| 1mze_A | 351 | Human Factor Inhibiting Hif (Fih1) Length = 351 | 5e-06 | ||
| 3kcx_A | 335 | Factor Inhibiting Hif-1 Alpha In Complex With Clioq | 5e-06 | ||
| 1h2k_A | 349 | Factor Inhibiting Hif-1 Alpha In Complex With Hif-1 | 5e-06 | ||
| 2y0i_A | 352 | Factor Inhibiting Hif-1 Alpha In Complex With Tanky | 5e-06 | ||
| 2xum_A | 349 | Factor Inhibiting Hif (Fih) Q239h Mutant In Complex | 8e-06 | ||
| 4gjz_A | 235 | Jmjd5 In Complex With 2-Oxoglutarate Length = 235 | 3e-05 | ||
| 3d8c_A | 349 | Factor Inhibiting Hif-1 Alpha D201g Mutant In Compl | 3e-05 | ||
| 2ilm_A | 349 | Factor Inhibiting Hif-1 Alpha D201a Mutant In Compl | 4e-05 | ||
| 4gjy_A | 235 | Jmjd5 In Complex With N-Oxalylglycine Length = 235 | 5e-05 | ||
| 4aap_A | 239 | Crystal Structure Of Jmjd5 Domain Of Human Lysine-S | 7e-05 | ||
| 3uyj_A | 248 | Crystal Structure Of Jmjd5 Catalytic Core Domain In | 7e-05 |
| >pdb|3AL5|A Chain A, Crystal Structure Of Human Tyw5 Length = 338 | Back alignment and structure |
|
| >pdb|1IZ3|A Chain A, Dimeric Structure Of Fih (Factor Inhibiting Hif) Length = 349 | Back alignment and structure |
| >pdb|1MZE|A Chain A, Human Factor Inhibiting Hif (Fih1) Length = 351 | Back alignment and structure |
| >pdb|3KCX|A Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Clioquinol Length = 335 | Back alignment and structure |
| >pdb|1H2K|A Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Hif-1 Alpha Fragment Peptide Length = 349 | Back alignment and structure |
| >pdb|2Y0I|A Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Tankyrase-2 (Tnks2) Fragment Peptide (21-Mer) Length = 352 | Back alignment and structure |
| >pdb|2XUM|A Chain A, Factor Inhibiting Hif (Fih) Q239h Mutant In Complex With Zn(Ii), Nog And Asp-Substrate Peptide (20-Mer) Length = 349 | Back alignment and structure |
| >pdb|4GJZ|A Chain A, Jmjd5 In Complex With 2-Oxoglutarate Length = 235 | Back alignment and structure |
| >pdb|3D8C|A Chain A, Factor Inhibiting Hif-1 Alpha D201g Mutant In Complex With Zn(Ii), Alpha-Ketoglutarate And Hif-1 Alpha 19mer Length = 349 | Back alignment and structure |
| >pdb|2ILM|A Chain A, Factor Inhibiting Hif-1 Alpha D201a Mutant In Complex With Fe(ii), Alpha-ketoglutarate And Hif-1 Alpha 35mer Length = 349 | Back alignment and structure |
| >pdb|4GJY|A Chain A, Jmjd5 In Complex With N-Oxalylglycine Length = 235 | Back alignment and structure |
| >pdb|4AAP|A Chain A, Crystal Structure Of Jmjd5 Domain Of Human Lysine-Specific Demethylase 8 (Kdm8) In Complex With N-Oxalylglycine (Nog) Length = 239 | Back alignment and structure |
| >pdb|3UYJ|A Chain A, Crystal Structure Of Jmjd5 Catalytic Core Domain In Complex With Nickle And Alpha-Kg Length = 248 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... Length = 349 | Back alignment and structure |
|---|
Score = 171 bits (434), Expect = 2e-50
Identities = 59/324 (18%), Positives = 110/324 (33%), Gaps = 47/324 (14%)
Query: 8 WDEVRELSLGSNS-TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPS 66
WDE + S + I RL + + +P ++ + +L +PA W
Sbjct: 27 WDESQLRSYSFPTRPIPRLSQSD---PRAEELIENEEPVVLTDTNLV--YPALK-W-DLE 79
Query: 67 YLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNS 126
YL + + + SV+ + + + ++ E + F E ++ + +
Sbjct: 80 YLQENIGNGD-FSVYSASTHKFL---YYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDI 135
Query: 127 KNGDVVAYLQQQNDCFRDEYSVLGSD-CDEHIAWATEALGC----YPEAVNLWIGNQLSE 181
+ L Q + D + W + G + L IG + +
Sbjct: 136 QQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNV 195
Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEP 241
T H +N + + G K +L PP +Y S+V+ + P
Sbjct: 196 TPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVD--------FDNP 247
Query: 242 VRYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPD 301
+ +FP F +E V G++LY+P W+HH+ S
Sbjct: 248 --------------------DYERFPN-FQNVVGYETVVGPGDVLYIPMYWWHHIE-SLL 285
Query: 302 DNGYTIALNYWYDMQFDIKYAYFN 325
+ G TI +N+WY K +
Sbjct: 286 NGGITITVNFWYKGAPTPKRIEYP 309
|
| >3uyj_A Lysine-specific demethylase 8; jellyroll-like all beta fold, nuclear, oxidored; HET: AKG; 2.35A {Homo sapiens} PDB: 4aap_A* Length = 248 | Back alignment and structure |
|---|
| >3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* Length = 338 | Back alignment and structure |
|---|
| >3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Length = 336 | Back alignment and structure |
|---|
| >3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* Length = 397 | Back alignment and structure |
|---|
| >1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Length = 342 | Back alignment and structure |
|---|
| >3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* Length = 392 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* Length = 371 | Back alignment and structure |
|---|
| >2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens} Length = 442 | Back alignment and structure |
|---|
| >2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A Length = 451 | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* Length = 488 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 380 | |||
| 4gjz_A | 235 | Lysine-specific demethylase 8; JMJC, beta barrel, | 100.0 | |
| 3al5_A | 338 | HTYW5, JMJC domain-containing protein C2ORF60; tRN | 100.0 | |
| 3d8c_A | 349 | Hypoxia-inducible factor 1 alpha inhibitor; FIH, H | 100.0 | |
| 3k2o_A | 336 | Bifunctional arginine demethylase and lysyl-hydro | 100.0 | |
| 2yu1_A | 451 | JMJC domain-containing histone demethylation PROT; | 99.98 | |
| 3k3o_A | 371 | PHF8, PHD finger protein 8; histone demethylase, c | 99.96 | |
| 1vrb_A | 342 | Putative asparaginyl hydroxylase; 2636534, structu | 99.96 | |
| 3pua_A | 392 | GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe | 99.96 | |
| 3kv5_D | 488 | JMJC domain-containing histone demethylation prote | 99.96 | |
| 3kv9_A | 397 | JMJC domain-containing histone demethylation prote | 99.95 | |
| 3kv4_A | 447 | PHD finger protein 8; epigenetics, histone CODE, c | 99.95 | |
| 2xdv_A | 442 | MYC-induced nuclear antigen; ribosome biogenesis, | 99.84 | |
| 4diq_A | 489 | Lysine-specific demethylase NO66; structural genom | 99.83 | |
| 3pur_A | 528 | Lysine-specific demethylase 7 homolog; oxidoreduct | 99.78 | |
| 2ypd_A | 392 | Probable JMJC domain-containing histone demethyla | 99.4 | |
| 2xxz_A | 332 | Lysine-specific demethylase 6B; oxidoreductase, hi | 97.95 | |
| 3dxt_A | 354 | JMJC domain-containing histone demethylation PROT; | 97.66 | |
| 4ask_A | 510 | Lysine-specific demethylase 6B; oxidoreductase, KD | 97.6 | |
| 3avr_A | 531 | Lysine-specific demethylase 6A; cupin superfamily, | 97.54 | |
| 3opt_A | 373 | DNA damage-responsive transcriptional repressor R; | 97.44 | |
| 2ox0_A | 381 | JMJC domain-containing histone demethylation PROT; | 97.1 | |
| 2fqp_A | 97 | Hypothetical protein BP2299; double-stranded beta- | 95.16 | |
| 2gm6_A | 208 | Cysteine dioxygenase type I; structural genomics, | 95.14 | |
| 1fxz_A | 476 | Glycinin G1; proglycinin, legumin, SEED storage pr | 95.05 | |
| 1x82_A | 190 | Glucose-6-phosphate isomerase; cupin superfamily, | 94.73 | |
| 1dgw_A | 178 | Canavalin; duplicated swiss-roll beta barrels, loo | 94.72 | |
| 3c3v_A | 510 | Arachin ARAH3 isoform; peanut allergen, allergy, g | 94.66 | |
| 3h8u_A | 125 | Uncharacterized conserved protein with double-STR | 94.58 | |
| 2e9q_A | 459 | 11S globulin subunit beta; cucubitin, pumpkin SEED | 94.56 | |
| 1fi2_A | 201 | Oxalate oxidase, germin; beta-jellyroll, oxidoredu | 94.52 | |
| 3nw4_A | 368 | Gentisate 1,2-dioxygenase; beta-barrel, oxidoreduc | 94.46 | |
| 2vqa_A | 361 | SLL1358 protein, MNCA; periplasmic binding protein | 94.35 | |
| 3bu7_A | 394 | Gentisate 1,2-dioxygenase; cupin domain, oxidoredu | 94.34 | |
| 3kgz_A | 156 | Cupin 2 conserved barrel domain protein; metallopr | 94.33 | |
| 3ibm_A | 167 | Cupin 2, conserved barrel domain protein; cupin 2 | 94.27 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 94.22 | |
| 1lr5_A | 163 | Auxin binding protein 1; beta jellyroll, double st | 94.13 | |
| 3fz3_A | 531 | Prunin; TREE NUT allergen, allergy, amandin, almon | 94.05 | |
| 2b8m_A | 117 | Hypothetical protein MJ0764; structural genomics, | 93.91 | |
| 4e2g_A | 126 | Cupin 2 conserved barrel domain protein; MCSG, PSI | 93.73 | |
| 2gu9_A | 113 | Tetracenomycin polyketide synthesis protein; X-RAY | 93.67 | |
| 2vqa_A | 361 | SLL1358 protein, MNCA; periplasmic binding protein | 93.58 | |
| 3uss_A | 211 | Putative uncharacterized protein; cupin, three his | 93.56 | |
| 3lag_A | 98 | Uncharacterized protein RPA4178; functionally unkn | 93.46 | |
| 4i4a_A | 128 | Similar to unknown protein; structural genomics, P | 93.37 | |
| 3jzv_A | 166 | Uncharacterized protein RRU_A2000; structural geno | 93.3 | |
| 3ksc_A | 496 | LEGA class, prolegumin; PEA prolegumin, 11S SEED s | 93.12 | |
| 2oa2_A | 148 | BH2720 protein; 10175341, structural genomics, joi | 93.09 | |
| 3kgl_A | 466 | Cruciferin; 11S SEED globulin, rapeseed, SEED stor | 92.83 | |
| 2o8q_A | 134 | Hypothetical protein; cpuin-like fold, structural | 92.78 | |
| 2d5f_A | 493 | Glycinin A3B4 subunit; soybean, globulin, 11S,SEED | 92.65 | |
| 3eqe_A | 171 | Putative cystein deoxygenase; YUBC, SR112, NESG, s | 92.58 | |
| 3ejk_A | 174 | DTDP sugar isomerase; YP_390184.1, structural geno | 92.52 | |
| 1zvf_A | 176 | 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll b | 92.49 | |
| 1v70_A | 105 | Probable antibiotics synthesis protein; structural | 92.44 | |
| 3fjs_A | 114 | Uncharacterized protein with RMLC-like cupin fold; | 92.43 | |
| 1yhf_A | 115 | Hypothetical protein SPY1581; structural genomics, | 92.35 | |
| 3lwc_A | 119 | Uncharacterized protein; structural genomics, unkn | 92.34 | |
| 3bu7_A | 394 | Gentisate 1,2-dioxygenase; cupin domain, oxidoredu | 92.27 | |
| 4b29_A | 217 | Dimethylsulfoniopropionate lyase; hydrolase, dimet | 92.14 | |
| 2y0o_A | 175 | Probable D-lyxose ketol-isomerase; carbohydrate me | 92.09 | |
| 2d40_A | 354 | Z3393, putative gentisate 1,2-dioxygenase; gentisi | 92.01 | |
| 2d40_A | 354 | Z3393, putative gentisate 1,2-dioxygenase; gentisi | 91.96 | |
| 2opk_A | 112 | Hypothetical protein; putative mannose-6-phosphate | 91.9 | |
| 1o4t_A | 133 | Putative oxalate decarboxylase; double-stranded be | 91.76 | |
| 1uij_A | 416 | Beta subunit of beta conglycinin; double-stranded | 91.69 | |
| 3l2h_A | 162 | Putative sugar phosphate isomerase; AFE_0303, stru | 91.63 | |
| 2pfw_A | 116 | Cupin 2, conserved barrel domain protein; cupin do | 91.55 | |
| 3qac_A | 465 | 11S globulin SEED storage protein; 11S SEED storag | 91.53 | |
| 1j58_A | 385 | YVRK protein; cupin, decarboxyklase, oxalate, mang | 91.52 | |
| 2f4p_A | 147 | Hypothetical protein TM1010; double-stranded beta- | 91.32 | |
| 3i7d_A | 163 | Sugar phosphate isomerase; YP_168127.1, structural | 91.23 | |
| 1j58_A | 385 | YVRK protein; cupin, decarboxyklase, oxalate, mang | 91.19 | |
| 3eln_A | 200 | Cysteine dioxygenase type 1; peroxysulfenate, non- | 91.18 | |
| 2ea7_A | 434 | 7S globulin-1; beta barrel, cupin superfamily, pla | 91.15 | |
| 2ozj_A | 114 | Cupin 2, conserved barrel; cupin superfamily prote | 90.98 | |
| 1nxm_A | 197 | DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jell | 90.88 | |
| 3cew_A | 125 | Uncharacterized cupin protein; all beta-protein, j | 90.7 | |
| 1o5u_A | 101 | Novel thermotoga maritima enzyme TM1112; cupin, st | 90.7 | |
| 2phl_A | 397 | Phaseolin; plant SEED storage protein(vicilin); HE | 90.6 | |
| 1yfu_A | 174 | 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxid | 90.49 | |
| 1uij_A | 416 | Beta subunit of beta conglycinin; double-stranded | 90.02 | |
| 3h7j_A | 243 | Bacilysin biosynthesis protein BACB; YWFC, bacilys | 90.02 | |
| 3ht1_A | 145 | REMF protein; cupin fold, Zn-binding, antibiotic b | 90.0 | |
| 2bnm_A | 198 | Epoxidase; oxidoreductase, cupin, HTH, cation-depe | 89.83 | |
| 4axo_A | 151 | EUTQ, ethanolamine utilization protein; structural | 89.45 | |
| 3nw4_A | 368 | Gentisate 1,2-dioxygenase; beta-barrel, oxidoreduc | 89.42 | |
| 1wlt_A | 196 | 176AA long hypothetical DTDP-4-dehydrorhamnose 3, | 89.07 | |
| 2ozi_A | 98 | Hypothetical protein RPA4178; APC6210, putative pr | 89.07 | |
| 1vj2_A | 126 | Novel manganese-containing cupin TM1459; structura | 89.06 | |
| 3bb6_A | 127 | Uncharacterized protein YEAR; structural genomics, | 88.98 | |
| 1y3t_A | 337 | Hypothetical protein YXAG; BI cupin, dioxygenase, | 88.93 | |
| 2cav_A | 445 | Protein (canavalin); vicilin, 7S SEED protein, dom | 88.48 | |
| 3d82_A | 102 | Cupin 2, conserved barrel domain protein; structur | 88.46 | |
| 2ea7_A | 434 | 7S globulin-1; beta barrel, cupin superfamily, pla | 88.45 | |
| 2ixk_A | 184 | DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, l | 88.31 | |
| 1ep0_A | 185 | DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; race | 88.15 | |
| 1fxz_A | 476 | Glycinin G1; proglycinin, legumin, SEED storage pr | 87.92 | |
| 3rns_A | 227 | Cupin 2 conserved barrel domain protein; structura | 87.89 | |
| 3ryk_A | 205 | DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pat | 87.83 | |
| 3bcw_A | 123 | Uncharacterized protein; structural genomics, join | 87.34 | |
| 2cav_A | 445 | Protein (canavalin); vicilin, 7S SEED protein, dom | 87.25 | |
| 3dl3_A | 119 | Tellurite resistance protein B; X-RAY NESG VFR98 Q | 87.14 | |
| 2e9q_A | 459 | 11S globulin subunit beta; cucubitin, pumpkin SEED | 86.91 | |
| 2q30_A | 110 | Uncharacterized protein; double-stranded beta-heli | 86.8 | |
| 1oi6_A | 205 | PCZA361.16; epimerase, vancomycin group antibiotic | 86.76 | |
| 2i45_A | 107 | Hypothetical protein; neisseria meningitidis cupin | 86.66 | |
| 3es1_A | 172 | Cupin 2, conserved barrel domain protein; YP_00116 | 86.54 | |
| 1dzr_A | 183 | DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, | 86.4 | |
| 1y3t_A | 337 | Hypothetical protein YXAG; BI cupin, dioxygenase, | 86.27 | |
| 3h7j_A | 243 | Bacilysin biosynthesis protein BACB; YWFC, bacilys | 86.2 | |
| 1y9q_A | 192 | Transcriptional regulator, HTH_3 family; transcrip | 86.06 | |
| 2d5f_A | 493 | Glycinin A3B4 subunit; soybean, globulin, 11S,SEED | 85.72 | |
| 2c0z_A | 216 | NOVW; isomerase, epimerase, antibiotic biosynthesi | 85.52 | |
| 3qac_A | 465 | 11S globulin SEED storage protein; 11S SEED storag | 85.23 | |
| 2pyt_A | 133 | Ethanolamine utilization protein EUTQ; structural | 85.2 | |
| 1upi_A | 225 | DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pat | 85.15 | |
| 2qnk_A | 286 | 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fol | 84.31 | |
| 1vr3_A | 191 | Acireductone dioxygenase; 13543033, structural gen | 83.78 | |
| 2vpv_A | 166 | Protein MIF2, MIF2P; nucleus, mitosis, centromere, | 83.76 | |
| 1juh_A | 350 | Quercetin 2,3-dioxygenase; cupin, glycoprotein, be | 83.65 | |
| 1zrr_A | 179 | E-2/E-2' protein; nickel, cupin, beta helix, methi | 82.19 | |
| 3rns_A | 227 | Cupin 2 conserved barrel domain protein; structura | 82.03 | |
| 2xlg_A | 239 | SLL1785 protein, CUCA; metal binding protein, cupi | 82.01 | |
| 2rg4_A | 216 | Uncharacterized protein; rhodobacterales, oceanico | 81.81 | |
| 3c3v_A | 510 | Arachin ARAH3 isoform; peanut allergen, allergy, g | 81.08 | |
| 4hn1_A | 201 | Putative 3-epimerase in D-allose pathway; 3'-monoe | 80.31 |
| >4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=365.70 Aligned_cols=233 Identities=23% Similarity=0.461 Sum_probs=187.5
Q ss_pred CcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCcccccccCCCCC
Q 016948 20 STIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS 99 (380)
Q Consensus 20 ~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~~~~~~~~~~ 99 (380)
++|+|++. +|+++|+++|+.+++||||+|++.+ |||+++|+. +||++++|+. .|.|+.+.... +
T Consensus 1 stipri~~-pS~~eF~~~y~~~~~Pvvi~g~~~~--wpa~~~w~~-~yL~~~~g~~-~v~v~~~~~~~-~---------- 64 (235)
T 4gjz_A 1 STVPRLHR-PSLQHFREQFLVPGRPVILKGVADH--WPCMQKWSL-EYIQEIAGCR-TVPVEVGSRYT-D---------- 64 (235)
T ss_dssp CBCCEEES-CCHHHHHHHTTTTTCCEEEESSSTT--SHHHHHCSH-HHHHHHHTTS-EEEEEEC----------------
T ss_pred CCCCCCCC-CCHHHHHHHHhcCCCcEEEeCCCcC--CcccccCCH-HHHHHHcCCC-eEEEEecCccc-C----------
Confidence 37999998 9999999999999999999999999 999999998 9999999999 99998754311 1
Q ss_pred CcccccccccccccCChHHHHHHHHccCCCCcccccccccccchhhhhhhcccccccch-hhhh-hhCCCCCceEEEecC
Q 016948 100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-WATE-ALGCYPEAVNLWIGN 177 (380)
Q Consensus 100 g~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~e~p~L~~Di~~~ip-~~~~-~~~~~~~~~~lwiG~ 177 (380)
. ......|+|++|++.+..... ....|+.+.+ +...+|+|.+|+. +| +... .+.......++|||+
T Consensus 65 ----~---~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~--~~~~~~~l~~d~~--~p~~~~~~~~~~~~~~~~~wiG~ 132 (235)
T 4gjz_A 65 ----E---EWSQTLMTVNEFISKYIVNEP-RDVGYLAQHQ--LFDQIPELKQDIS--IPDYCSLGDGEEEEITINAWFGP 132 (235)
T ss_dssp ---------CEEEEEEHHHHHHHHTSSCC-SSCEEEEEEC--HHHHCHHHHTTCC--CCGGGGGSSSCGGGCEEEEEEEC
T ss_pred ----C---ccceeeccHHHHHHHHhhcCC-cccceeehhh--hhhhhHHHHHhhc--CCccccccccccCccceEEEEeC
Confidence 0 113578999999998877643 3467777643 4567788999884 33 2211 112234578999999
Q ss_pred CCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCcccccccccCCCCCcc
Q 016948 178 QLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPSPE 257 (380)
Q Consensus 178 ~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~~~~~~s~vd~~~~~~ 257 (380)
+|+.|++|+|+++|++|||+|+|+|+||||.+...||+..... ....|.+|+
T Consensus 133 ~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~-----------------------~~~~s~vd~----- 184 (235)
T 4gjz_A 133 QGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHL-----------------------LHNTSQVDV----- 184 (235)
T ss_dssp TTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTT-----------------------TTTBBSSCT-----
T ss_pred CCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccc-----------------------cCccccccc-----
Confidence 9999999999999999999999999999999999998643110 112355666
Q ss_pred ccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeec
Q 016948 258 TRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYD 314 (380)
Q Consensus 258 ~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~ 314 (380)
.++|+++||+|++ +++++|+|+|||+||||+||||+|+|++ .||||||||.
T Consensus 185 -~~~d~~~~p~~~~-~~~~~~~l~pGD~LyiP~gW~H~V~~l~----~sisvn~w~s 235 (235)
T 4gjz_A 185 -ENPDLEKFPKFAK-APFLSCILSPGEILFIPVKYWHYVRALD----LSFSVSFWWS 235 (235)
T ss_dssp -TSCCTTTCGGGGG-CCCEEEEECTTCEEEECTTCEEEEEESS----SEEEEEEEEC
T ss_pred -cCcchhhCccccC-CCcEEEEECCCCEEEeCCCCcEEEEECC----CEEEEEEecC
Confidence 5789999999986 8999999999999999999999999994 6999999983
|
| >3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* | Back alignment and structure |
|---|
| >3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... | Back alignment and structure |
|---|
| >3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* | Back alignment and structure |
|---|
| >2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A | Back alignment and structure |
|---|
| >3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* | Back alignment and structure |
|---|
| >1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 | Back alignment and structure |
|---|
| >3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* | Back alignment and structure |
|---|
| >3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* | Back alignment and structure |
|---|
| >3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* | Back alignment and structure |
|---|
| >3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} | Back alignment and structure |
|---|
| >2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens} | Back alignment and structure |
|---|
| >4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* | Back alignment and structure |
|---|
| >2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A* | Back alignment and structure |
|---|
| >4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A* | Back alignment and structure |
|---|
| >3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A* | Back alignment and structure |
|---|
| >3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A* | Back alignment and structure |
|---|
| >2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A* | Back alignment and structure |
|---|
| >2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} | Back alignment and structure |
|---|
| >2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19 | Back alignment and structure |
|---|
| >1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A | Back alignment and structure |
|---|
| >1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A* | Back alignment and structure |
|---|
| >1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A | Back alignment and structure |
|---|
| >3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} | Back alignment and structure |
|---|
| >3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A | Back alignment and structure |
|---|
| >1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A | Back alignment and structure |
|---|
| >3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A | Back alignment and structure |
|---|
| >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} | Back alignment and structure |
|---|
| >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1} | Back alignment and structure |
|---|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
| >1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* | Back alignment and structure |
|---|
| >3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A | Back alignment and structure |
|---|
| >2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 | Back alignment and structure |
|---|
| >4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
| >2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A | Back alignment and structure |
|---|
| >2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} | Back alignment and structure |
|---|
| >3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19 | Back alignment and structure |
|---|
| >3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp} | Back alignment and structure |
|---|
| >3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
| >3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} | Back alignment and structure |
|---|
| >2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans} | Back alignment and structure |
|---|
| >3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus} | Back alignment and structure |
|---|
| >2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A | Back alignment and structure |
|---|
| >3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20 | Back alignment and structure |
|---|
| >1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A | Back alignment and structure |
|---|
| >3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
| >1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} | Back alignment and structure |
|---|
| >3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism} | Back alignment and structure |
|---|
| >2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
| >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 | Back alignment and structure |
|---|
| >2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha} | Back alignment and structure |
|---|
| >1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* | Back alignment and structure |
|---|
| >3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} | Back alignment and structure |
|---|
| >2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina} | Back alignment and structure |
|---|
| >3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus} | Back alignment and structure |
|---|
| >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A | Back alignment and structure |
|---|
| >2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9 | Back alignment and structure |
|---|
| >3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
| >1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A | Back alignment and structure |
|---|
| >3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A | Back alignment and structure |
|---|
| >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A | Back alignment and structure |
|---|
| >2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense} | Back alignment and structure |
|---|
| >1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A* | Back alignment and structure |
|---|
| >3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A | Back alignment and structure |
|---|
| >2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* | Back alignment and structure |
|---|
| >1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A* | Back alignment and structure |
|---|
| >1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* | Back alignment and structure |
|---|
| >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* | Back alignment and structure |
|---|
| >3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A | Back alignment and structure |
|---|
| >2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A | Back alignment and structure |
|---|
| >4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile} | Back alignment and structure |
|---|
| >3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A | Back alignment and structure |
|---|
| >1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A | Back alignment and structure |
|---|
| >1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 | Back alignment and structure |
|---|
| >3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13 | Back alignment and structure |
|---|
| >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* | Back alignment and structure |
|---|
| >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B | Back alignment and structure |
|---|
| >3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} | Back alignment and structure |
|---|
| >2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A | Back alignment and structure |
|---|
| >2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A* | Back alignment and structure |
|---|
| >1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A* | Back alignment and structure |
|---|
| >1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A | Back alignment and structure |
|---|
| >3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} | Back alignment and structure |
|---|
| >3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str} | Back alignment and structure |
|---|
| >3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50} | Back alignment and structure |
|---|
| >2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B | Back alignment and structure |
|---|
| >3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13 | Back alignment and structure |
|---|
| >2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A | Back alignment and structure |
|---|
| >2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A | Back alignment and structure |
|---|
| >2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
| >1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A* | Back alignment and structure |
|---|
| >1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* | Back alignment and structure |
|---|
| >3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* | Back alignment and structure |
|---|
| >1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 | Back alignment and structure |
|---|
| >2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A | Back alignment and structure |
|---|
| >2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1 | Back alignment and structure |
|---|
| >3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus} | Back alignment and structure |
|---|
| >2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24 | Back alignment and structure |
|---|
| >1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A* | Back alignment and structure |
|---|
| >2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A | Back alignment and structure |
|---|
| >1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6 | Back alignment and structure |
|---|
| >2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* | Back alignment and structure |
|---|
| >1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A | Back alignment and structure |
|---|
| >3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} | Back alignment and structure |
|---|
| >2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A | Back alignment and structure |
|---|
| >2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A | Back alignment and structure |
|---|
| >3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} | Back alignment and structure |
|---|
| >4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 380 | ||||
| d1h2ka_ | 335 | b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibit | 5e-27 | |
| d1vrba1 | 319 | b.82.2.11 (A:8-326) Putative asparaginyl hydroxyla | 5e-16 |
| >d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Hypoxia-inducible factor HIF ihhibitor (FIH1) domain: Hypoxia-inducible factor HIF ihhibitor (FIH1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 5e-27
Identities = 53/298 (17%), Positives = 101/298 (33%), Gaps = 46/298 (15%)
Query: 21 TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSV 80
I RL + + +P ++ + +L +PA W YL + + + SV
Sbjct: 27 PIPRLSQSD---PRAEELIENEEPVVLTDTNLV--YPALK-W-DLEYLQENIGNGD-FSV 78
Query: 81 HLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDV-VAYLQQQN 139
+ + + + ++ E + F E ++ + + + QQ
Sbjct: 79 YSASTHKFL---YYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQT 135
Query: 140 DCFRDEYSVLGSDCDEHIAWATEALGC----YPEAVNLWIGNQLSETSFHKDHYENLYTV 195
++ + W + G + L IG + + T H D +N +
Sbjct: 136 LNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQ 195
Query: 196 VSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPVRYVPWCSVNPYPS 255
+ G K +L PP +Y S+V+
Sbjct: 196 IKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVD-------------------------- 229
Query: 256 PETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWY 313
+ +FP F +E V G++LY+P W+HH+ S + G TI +N+WY
Sbjct: 230 --FDNPDYERFP-NFQNVVGYETVVGPGDVLYIPMYWWHHIE-SLLNGGITITVNFWY 283
|
| >d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Length = 319 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 380 | |||
| d1h2ka_ | 335 | Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum | 100.0 | |
| d1vrba1 | 319 | Putative asparaginyl hydroxylase YxbC {Bacillus su | 99.98 | |
| d1lr5a_ | 160 | Auxin binding protein {Maize (Zea mays) [TaxId: 45 | 97.41 | |
| d1x82a_ | 190 | Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc | 96.82 | |
| g1dgw.1 | 168 | Seed storage 7S protein {Jack bean (Canavalia ensi | 96.57 | |
| d2phla2 | 162 | Seed storage 7S protein {French bean (Phaseolus vu | 96.55 | |
| d1fxza2 | 174 | Seed storage 7S protein {Soybean (Glycine max), pr | 96.3 | |
| d2f4pa1 | 134 | Hypothetical protein TM1010 {Thermotoga maritima [ | 96.29 | |
| d2b8ma1 | 108 | Hypothetical protein MJ0764 {Archaeon Methanococcu | 96.22 | |
| d1o4ta_ | 115 | Hypothetical protein TM1287 {Thermotoga maritima [ | 96.14 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 96.04 | |
| d2et1a1 | 201 | Germin {Barley (Hordeum vulgare) [TaxId: 4513]} | 96.03 | |
| d1v70a_ | 105 | Hypothetical protein TTHA0104 {Thermus thermophilu | 95.9 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 95.78 | |
| d1uija1 | 170 | Seed storage 7S protein {Soybean (Glycine max), be | 95.73 | |
| d1uika2 | 185 | Seed storage 7S protein {Soybean (Glycine max), be | 95.61 | |
| d1od5a2 | 173 | Seed storage 7S protein {Soybean (Glycine max), gl | 95.54 | |
| d2bnma2 | 122 | Hydroxypropylphosphonic acid epoxidase Fom4, C-ter | 95.37 | |
| d2d40a1 | 308 | Gentisate 1,2-dioxygenase {Escherichia coli [TaxId | 95.22 | |
| d1vj2a_ | 114 | Hypothetical protein TM1459 {Thermotoga maritima [ | 94.89 | |
| d1zvfa1 | 175 | 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yea | 94.83 | |
| d1dgwa_ | 178 | Seed storage 7S protein {Jack bean (Canavalia ensi | 94.79 | |
| d2phda1 | 351 | Gentisate 1,2-dioxygenase {Pseudaminobacter salicy | 94.69 | |
| d1uika1 | 203 | Seed storage 7S protein {Soybean (Glycine max), be | 94.67 | |
| d1yhfa1 | 112 | Hypothetical protein SPy1581 {Streptococcus pyogen | 93.93 | |
| d2d40a1 | 308 | Gentisate 1,2-dioxygenase {Escherichia coli [TaxId | 93.91 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 93.4 | |
| d1wlta1 | 176 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Archaeo | 93.32 | |
| d2gm6a1 | 192 | Cysteine dioxygenase type I {Ralstonia eutropha [T | 92.79 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 92.49 | |
| d3elna1 | 186 | Cysteine dioxygenase type I {Rattus norvegicus [Ta | 92.39 | |
| d2ixca1 | 198 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Mycobac | 92.35 | |
| d1ep0a_ | 183 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Archaeo | 92.31 | |
| d1nxma_ | 194 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Strepto | 92.21 | |
| d3bb6a1 | 109 | Uncharacterized protein YeaR {Escherichia coli [Ta | 91.7 | |
| d1yfua1 | 174 | 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia m | 91.64 | |
| d1juha_ | 348 | Quercetin 2,3-dioxygenase {Aspergillus japonicus [ | 91.44 | |
| d1y3ta1 | 330 | Hypothetical protein YxaG {Bacillus subtilis [TaxI | 91.25 | |
| d3dl3a1 | 96 | Tellurite resistance protein B, TehB {Vibrio fisch | 91.13 | |
| d1y3ta1 | 330 | Hypothetical protein YxaG {Bacillus subtilis [TaxI | 91.12 | |
| d2phda1 | 351 | Gentisate 1,2-dioxygenase {Pseudaminobacter salicy | 90.82 | |
| d1y9qa2 | 99 | Probable transcriptional regulator VC1968, C-termi | 90.79 | |
| d1dzra_ | 183 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Salmone | 90.76 | |
| d2pyta1 | 128 | Ethanolamine utilization protein EutQ {Salmonella | 89.54 | |
| d2phla1 | 200 | Seed storage 7S protein {French bean (Phaseolus vu | 88.7 | |
| d1oi6a_ | 202 | dTDP-4-keto-6-deoxy-glucose-5-epimerase EvaD {Amyc | 88.16 | |
| d2pa7a1 | 135 | dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA {Ane | 87.77 | |
| d2ixha1 | 184 | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Pseudom | 87.62 | |
| d2c0za1 | 190 | Novobiocin biosynthesis protein NovW {Streptomyces | 87.5 | |
| d1sefa_ | 250 | Hypothetical protein EF2996 {Enterococcus faecalis | 85.61 | |
| d1juha_ | 348 | Quercetin 2,3-dioxygenase {Aspergillus japonicus [ | 85.27 | |
| d1sq4a_ | 273 | Glyoxylate-induced protein PA1140 {Pseudomonas aer | 81.22 | |
| d1sefa_ | 250 | Hypothetical protein EF2996 {Enterococcus faecalis | 80.35 | |
| d1zrra1 | 179 | Acireductone dioxygenase {Klebsiella pneumoniae [T | 80.29 |
| >d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: Hypoxia-inducible factor HIF ihhibitor (FIH1) domain: Hypoxia-inducible factor HIF ihhibitor (FIH1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-42 Score=332.59 Aligned_cols=261 Identities=23% Similarity=0.413 Sum_probs=185.2
Q ss_pred hhhccCCCCCcceeeCCCCCHHHHHHHhhcCCCcEEEECCCCCCCCccccCCCChhhhHhhcCCCCcEEEEecCCCCccc
Q 016948 11 VRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADS 90 (380)
Q Consensus 11 ~~~~~~~~~~~V~rv~~~~s~~~F~~~yv~~~~PvVi~g~~~~~~WpA~~~Wt~~~yL~~~~G~~~~V~v~~~~~~~~d~ 90 (380)
++.++++. .+|+|++. .+. +.++|++.++||||+|+..+ |||+ +||. +||++++|+. .|+|+.++++..+.
T Consensus 18 l~~~~~~~-~~vpr~~~-~~~--~~e~y~~~~~PvVi~g~~~~--Wpa~-kWt~-dyL~~~~Gd~-~V~v~~~~~~~~~~ 88 (335)
T d1h2ka_ 18 LRSYSFPT-RPIPRLSQ-SDP--RAEELIENEEPVVLTDTNLV--YPAL-KWDL-EYLQENIGNG-DFSVYSASTHKFLY 88 (335)
T ss_dssp SCCCSSCE-EECCEECT-TCH--HHHHHHHTTCCEEESCCCTT--GGGG-GCCH-HHHHHHSCSC-CEEEEEESSSBCCC
T ss_pred ccCCCCCC-cccCccCC-CCc--CHHHHhcCCCCEEEeCCCCC--CCcc-cCCH-HHHHHhhCCc-eEEEEEecCccccc
Confidence 34444443 57888887 333 56789999999999999999 9998 6998 9999999999 99999876543322
Q ss_pred ccccCCCCCCccccccc-ccccccCChHHHHHHHHccC--CCCcccccccccccchhhhhhhcccccc-cchhhhhhh--
Q 016948 91 LVTLTHPRSGEISQCFA-SAHVERLPFDEALQLVSNSK--NGDVVAYLQQQNDCFRDEYSVLGSDCDE-HIAWATEAL-- 164 (380)
Q Consensus 91 ~~~~~~~~~g~~~~~f~-~~~~~~m~~~efl~~~~~~~--~~~~~~Yl~~~~~~l~~e~p~L~~Di~~-~ip~~~~~~-- 164 (380)
..... ... ...|. ......|++++|++.+.... .....+|+.+.. .....+.+..|+.. ...|.....
T Consensus 89 ~~~~~--~~~--~~~~~~~~~~~~~~~~ef~~~~~~~~~~~~~~~~yl~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~ 162 (335)
T d1h2ka_ 89 YDEKK--MAN--FQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTL--NDTVGRKIVMDFLGFNWNWINKQQGK 162 (335)
T ss_dssp CCGGG--GGG--GTTCCCSEEEEEECHHHHHHHHHHHHHTTCCCEEEEEEEC--CTTSCHHHHHHHHTSCHHHHHHHHHH
T ss_pred ccccc--ccc--ccccccccchhcccHHHHHHHHHhccccCCCcceEhhhcc--ccccChhhhcccccCcccccchhhcc
Confidence 10000 000 11221 12356899999999886532 234567877632 11122334444421 111221111
Q ss_pred --CCCCCceEEEecCCCCcccccccCCCceEEEEeeeEEEEEeCCCCcCCCcccccCCccccccccCCCcceeeeecCCc
Q 016948 165 --GCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRMYIRQYPAAHYSYSRVNDVERFTLELEEPV 242 (380)
Q Consensus 165 --~~~~~~~~lwiG~~gs~t~lH~D~~~n~~~qv~G~K~~~L~pP~~~~~Ly~~~~p~~~~~~~~~~~~~~~~~~~d~p~ 242 (380)
.......+||||++|+.|++|+|.++||++||+|+|+|+||||.+...+|+... .. .
T Consensus 163 ~~~~~~~~~~lwiG~~gs~t~~H~D~~~~~~~q~~G~K~~~l~~p~~~~~~~~~~~--~~-------~------------ 221 (335)
T d1h2ka_ 163 RGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPV--HH-------P------------ 221 (335)
T ss_dssp HTCCCEEECEEEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBCCT--TS-------T------------
T ss_pred ccccCCcceEEEEcCCCCCCccccccccceEEEeccceEEEEeccccccccccccc--cC-------C------------
Confidence 122356789999999999999999999999999999999999999888886421 10 0
Q ss_pred ccccccccCCCCCccccchhhccCCCCCCCCCCeEEEEcCCCeEeeCCCceeeeeecCCCCCeEEEEEeeecCC
Q 016948 243 RYVPWCSVNPYPSPETRESEMAKFPLYFNGPKPFECTVNAGEILYLPSMWFHHVRQSPDDNGYTIALNYWYDMQ 316 (380)
Q Consensus 243 ~~~~~s~vd~~~~~~~~~~d~~~fP~f~~~~~~~~~~L~pGD~LfiP~gWwH~V~~l~d~~~~sIsvn~w~~~~ 316 (380)
...++.+|+ .++|+.++|.|.+ +++++|+|+|||+||||+||||+|+|+++ +++||||||||+..
T Consensus 222 -~~~~s~~d~------~~~d~~~~p~~~~-~~~~~~~l~pGd~L~iP~~w~H~V~~~~~-~~~sisvn~w~~~~ 286 (335)
T d1h2ka_ 222 -CDRQSQVDF------DNPDYERFPNFQN-VVGYETVVGPGDVLYIPMYWWHHIESLLN-GGITITVNFWYKGA 286 (335)
T ss_dssp -TTTBBCCCT------TSCCTTTCGGGGG-CCEEEEEECTTCEEEECTTCEEEEEECTT-SCCEEEEEEEEECC
T ss_pred -CCcceeccc------cCcchhhccchhc-CCceEEEECCCCEEeeCCCCeEEEEEcCC-CCeEEEEEeeecCC
Confidence 112456676 5788999999975 89999999999999999999999999964 58999999999753
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| >d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
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| >d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} | Back information, alignment and structure |
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| >d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} | Back information, alignment and structure |
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| >d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
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| >d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
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| >d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]} | Back information, alignment and structure |
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| >d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} | Back information, alignment and structure |
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| >d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]} | Back information, alignment and structure |
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| >d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} | Back information, alignment and structure |
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| >d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1zvfa1 b.82.1.20 (A:1-175) 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1dgwa_ b.82.1.2 (A:) Seed storage 7S protein {Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]} | Back information, alignment and structure |
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| >d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} | Back information, alignment and structure |
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| >d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} | Back information, alignment and structure |
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| >d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
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| >d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
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| >d1wlta1 b.82.1.1 (A:1-176) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
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| >d2gm6a1 b.82.1.19 (A:11-202) Cysteine dioxygenase type I {Ralstonia eutropha [TaxId: 106590]} | Back information, alignment and structure |
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| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
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| >d3elna1 b.82.1.19 (A:5-190) Cysteine dioxygenase type I {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
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| >d2ixca1 b.82.1.1 (A:1-198) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1ep0a_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1nxma_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Streptococcus suis [TaxId: 1307]} | Back information, alignment and structure |
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| >d3bb6a1 b.82.2.13 (A:1-109) Uncharacterized protein YeaR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1yfua1 b.82.1.20 (A:1-174) 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia metallidurans [TaxId: 119219]} | Back information, alignment and structure |
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| >d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} | Back information, alignment and structure |
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| >d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d3dl3a1 b.82.2.13 (A:5-100) Tellurite resistance protein B, TehB {Vibrio fischeri [TaxId: 668]} | Back information, alignment and structure |
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| >d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} | Back information, alignment and structure |
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| >d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
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| >d1dzra_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} | Back information, alignment and structure |
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| >d1oi6a_ b.82.1.1 (A:) dTDP-4-keto-6-deoxy-glucose-5-epimerase EvaD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
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| >d2pa7a1 b.82.1.1 (A:2-136) dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA {Aneurinibacillus thermoaerophilus [TaxId: 143495]} | Back information, alignment and structure |
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| >d2ixha1 b.82.1.1 (A:1-184) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d2c0za1 b.82.1.1 (A:1-190) Novobiocin biosynthesis protein NovW {Streptomyces caeruleus [TaxId: 195949]} | Back information, alignment and structure |
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| >d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} | Back information, alignment and structure |
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| >d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
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